BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006154
         (658 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  868 bits (2242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/639 (63%), Positives = 515/639 (80%)

Query: 16  LSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPK 75
           L R+FH+GK   NP ++D+V RAICVNL+QR+W  LE+   SLTN+LV+RVV EFR +P+
Sbjct: 38  LERSFHLGKSILNPISDDVVLRAICVNLKQRRWNFLEKNLASLTNALVSRVVCEFRNTPQ 97

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL 135
           L LEFY WVGE     HSLE SC+++H+LVN RR+DDAL LMGNLM+ N +SPLE LE L
Sbjct: 98  LVLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEAL 157

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
            +SY IC++  AVFDALVRACTQIGAT GA +VI+KL+++G  V+IHAWNNFLSHL+K+N
Sbjct: 158 NNSYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVN 217

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           EI RFW +YKEMVS GY+ENVNTFN+V++ALCK+CKL+EALS++YR+LKSGIWPNVV FN
Sbjct: 218 EIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFN 277

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           M+++ AC++GD++ ALKL RKM +MS  S+ PNSVT+N +I+GFCK+G +  AEE+R  M
Sbjct: 278 MMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEM 337

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           +K  I+ NVRTYAT+I+GY+R G  EEALRLCDEMV+RGL+PN+VVYNS +HWL+ EGDV
Sbjct: 338 MKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDV 397

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +GA  V +DM DK I  D FT SILT+GLCRNG +  A K  NQVLE +++ DA+S+NIL
Sbjct: 398 DGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNIL 457

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           IN+LCKSNN AAA+QLL+ M VRGL+PD++T+GTLIDG+CK GNIE AVQVY+ M K E+
Sbjct: 458 INFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEE 517

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
           KPNL++YNSIINGLCKD  +D A+SL+   QR+GL+D ITYNTLINGYF  GK  +AF +
Sbjct: 518 KPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKL 577

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            + M+N GI  +   YN +I FLCKFGC Q+A+ELM +M+L G++PD +TY TLV   +K
Sbjct: 578 STLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININK 637

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           NCS EEVIELHD MVL GV PD  TY  I+SPLL E+SA
Sbjct: 638 NCSAEEVIELHDYMVLKGVVPDKLTYENIVSPLLQEESA 676


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/602 (62%), Positives = 475/602 (78%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDA 113
           M P++T SLV RV+ +F+ SP+LALEF+ WV E     HS+ES C ++H+LVN +R+DDA
Sbjct: 1   MLPNMTCSLVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDA 60

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
           L +MGNLM+ N +SPLE L+ L+ SY+ICK++PAVFDALVR CTQIGATEGAY+VI KL+
Sbjct: 61  LFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQ 120

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           + G  V++HAWNNFLSHL+KLN++ RFWK+YKEMVS GY+ENVNTFNL+IYAL KE +L 
Sbjct: 121 LDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLV 180

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA+S+ YR LK+GIWPNVV FNMII+ A ++G ++ ALKL RKM VMSG SV P+SVT+N
Sbjct: 181 EAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYN 240

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
             +NGFCK+G +  AEE +  M+   I+ NVRTYATL+DGY R GS E A RLCDE+V++
Sbjct: 241 SFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEK 300

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           GL+PN+V+YNS IHWL  EGD+EGA  +LSDMIDK I PD FTYSI+ +GLCRNG + +A
Sbjct: 301 GLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEA 360

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           FK    +LE  +V DA+S+N++INYLC+SNNLA AKQLL++M VRGL+PD++T+GTLID 
Sbjct: 361 FKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDR 420

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
           +CK G +E A+QVYE M K  +KPNL+IYNS+ING  K+ S D A  L+   +R+GL D 
Sbjct: 421 HCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLFDV 480

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYNTLI+GY   GKI +AFA+FSEMRN GI  + V YN LIN LCK G   QA+ELMK+
Sbjct: 481 VTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKM 540

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M+L G+IPDYVTYT L+T FSK CSPEEVIELHD MVL GV PD QTY  ++ PLL E+S
Sbjct: 541 MVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEES 600

Query: 654 AE 655
            E
Sbjct: 601 VE 602



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 185/365 (50%), Gaps = 10/365 (2%)

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           ++G  E A E+   +   G    V  +   +    +        ++  EMV  G + N  
Sbjct: 105 QIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVN 164

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            +N  I+ L  EG +  A+ V+   +   I P+  T++++  G  + G +  A KL  ++
Sbjct: 165 TFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKM 224

Query: 421 LEEHMVG-----DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
             E M G     D+ +YN  +N  CK  NLA A++    M+ + + P++ TY TL+DGY 
Sbjct: 225 --EVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYT 282

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDA 533
           + G++E A ++ + + +    PN VIYNSII+ L  +  ++ A  LL     +RI   D 
Sbjct: 283 RVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRI-YPDQ 341

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TY+ +I G   NG + EAF     +  + +  +   +N++IN+LC+      A++L+  
Sbjct: 342 FTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLAN 401

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M + G++PD VT+ TL+ R  K+   E  I++++ M+ +G  P+   YN++I+    E S
Sbjct: 402 MYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGS 461

Query: 654 AEDQV 658
            +  +
Sbjct: 462 FDPAI 466



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 18/160 (11%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           FD A+LL+  L             GL D           ++ L+      G  + A+ + 
Sbjct: 462 FDPAILLIDTLRRM----------GLFDV--------VTYNTLIHGYCNCGKIDQAFALF 503

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            +++  G   S   +N  ++ L K   + +  +L K MV  G + +  T+ ++I +  K+
Sbjct: 504 SEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKK 563

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
           C  EE + L+  M+  G+ P+   +  ++    Q   +EF
Sbjct: 564 CSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVEF 603


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/636 (60%), Positives = 494/636 (77%)

Query: 18  RAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLA 77
           R F  GK+  +PSTEDI+++AICVNL+QR+WK LEQ++PSLTNSLV RVV EFR SP+LA
Sbjct: 16  RGFRTGKKLLSPSTEDIIYKAICVNLKQRRWKFLEQVSPSLTNSLVCRVVREFRNSPQLA 75

Query: 78  LEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD 137
           LEFY WV   + FSHSLES C +VH+LVN R F+DAL +M +LM  N  SPLE L GL++
Sbjct: 76  LEFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLKNGKSPLEVLGGLMN 135

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           SYEIC + PAVFDALVR CTQ+ + EGAYDVI+KL+++G  V+IHAWNNFL+ L+KL E 
Sbjct: 136 SYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGET 195

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
            +FW +Y EMV+ GY ENVNTFNL+IYALCKECKL EA+S+ Y MLK  IWPNVV FNMI
Sbjct: 196 DKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMI 255

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I++A ++G+++ ALKL R   V+SG SV PN VT+NCIINGFCK+ R+E A+ +   MIK
Sbjct: 256 IDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIK 315

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            GID N RTYA LIDGYAR GS + A RLCDEMV+  L+P+ VVYNS I+WL+ EG++E 
Sbjct: 316 LGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEE 375

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A F+LSDMI++ I PD FTYSILTKGLC +G + +A ++H  ++E ++V DAY++NILIN
Sbjct: 376 ASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILIN 435

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
           Y+ +S N+A AKQLLSSMIVRG+ PD++TYGTL+ G+CK G IE AVQ+Y+   K + K 
Sbjct: 436 YMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKS 495

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           NLV+YNSI++GLCK  S+DAA+ L+   Q+ G LD++TYNTL++G+ +NG++ +AFA+F 
Sbjct: 496 NLVVYNSILDGLCKQGSIDAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFL 555

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM NVG  VN V YNI+INFLCK G  QQA ELM+ M   GI+PD +TYTTL+T F K+ 
Sbjct: 556 EMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSY 615

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
             + VIELHD MVL G  PD QTY +++SP L E +
Sbjct: 616 GSDNVIELHDYMVLKGAVPDRQTYQSLVSPCLQEHT 651



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 182/373 (48%), Gaps = 6/373 (1%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N    + ++    +L  VE A ++   +   G    +  +   ++   + G +++   + 
Sbjct: 143 NPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFWNMY 202

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EMV  G   N   +N  I+ L  E  +  A+ V+  M+   I P+  +++++     + 
Sbjct: 203 MEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKM 262

Query: 408 GCVKQAFKL--HNQVLEEHMVG-DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           G +  A KL  + +V+    V  +  +YN +IN  CK   L +AK +L+ MI  G+  + 
Sbjct: 263 GEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNE 322

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ- 523
            TY  LIDGY + G+++ A ++ + M +    P+ V+YNS+I  L  +  L+ A  LL  
Sbjct: 323 RTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSD 382

Query: 524 -ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             ++RI L D  TY+ L  G  ++G + +A  +   +    +  +   +NILIN++ +  
Sbjct: 383 MINRRI-LPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSR 441

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
               A++L+  MI+ GI PD VTY TLV    K    E  ++++D  V +    +   YN
Sbjct: 442 NIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYN 501

Query: 643 AIISPLLGEKSAE 655
           +I+  L  + S +
Sbjct: 502 SILDGLCKQGSID 514



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 31/202 (15%)

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G   ++ T+  +I   CK   +  A+ V   M K+E  PN+V +N II+   K   
Sbjct: 205 MVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGE 264

Query: 515 LDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           +D A  L             T NT +    I+G                ++ N V YN +
Sbjct: 265 MDLALKL-------------TRNTEV----ISGG--------------SVSPNIVTYNCI 293

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           IN  CK    + A+ ++  MI  GI  +  TY  L+  +++  S +    L D+MV + +
Sbjct: 294 INGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRL 353

Query: 635 SPDNQTYNAIISPLLGEKSAED 656
            PD   YN++I  L  E   E+
Sbjct: 354 IPDTVVYNSLIYWLYIEGELEE 375


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/641 (59%), Positives = 486/641 (75%)

Query: 13  NSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRK 72
           +S   R FH GK+  +PSTEDI+ +AICVNL+QR+WK LEQ++PSLTNSLV RVV EFR 
Sbjct: 11  SSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQVSPSLTNSLVCRVVREFRN 70

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           SP+LALEFY WV   + FSHSLES C +VH+LVN R F+DAL +M +L+  N  SPLE L
Sbjct: 71  SPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVL 130

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
            GL++SYEIC + PAVF A VR CTQ+ + EGAYDVI+KL+++G  V+IHAWNNFL+ L+
Sbjct: 131 GGLMNSYEICNSNPAVFXARVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLL 190

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           KL E  +F  +YKEM++ GY ENVNTFNL+IYALC ECKL EA+ + Y MLK  IWPNVV
Sbjct: 191 KLGETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVV 250

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            FNMII++A ++G+++ ALKL R   V+SG SV PN V +NCIINGFCK+ R+E A+ + 
Sbjct: 251 TFNMIIDKANKMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVL 310

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             MIK GI  N RTYATLIDGYAR GS + A RLCDEMV+  L+P+  VYNS I+WL+ E
Sbjct: 311 GEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYME 370

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G++E A F+LSDMI++ I PD FTYSILTKGLC +G + +A ++H  ++E  +V DA++Y
Sbjct: 371 GELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTY 430

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NILINY+ +S N+A AKQLLSSMIV G+ PD++TYGT +DG+CK G IE AVQ+Y+   K
Sbjct: 431 NILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVK 490

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEA 552
            + K NLV+YNSI++GLCK  S+ AAK L+   Q+ G LD +TYNTL++G+ +NG+I +A
Sbjct: 491 ADGKSNLVVYNSILDGLCKQGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKA 550

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           FA+F EM NVG  VN V YNI+I+FLCK G  QQA ELM+ M   GIIPD +TYTTL+T 
Sbjct: 551 FALFLEMINVGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITN 610

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           F + C  ++VIELHD MVL G  PD +TY + +SP L E +
Sbjct: 611 FVEICGSKDVIELHDYMVLKGAVPDRKTYRSFVSPCLQEHT 651



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 31/206 (15%)

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   MI  G   ++ T+  +I   C    +  A+ V   M K+E  PN+V +N II+   
Sbjct: 201 MYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKAN 260

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           K   +D A  L             T NT +    I+G                ++ N V 
Sbjct: 261 KMGEMDLALKL-------------TRNTEV----ISGG--------------SVSPNIVA 289

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN +IN  CK    + A+ ++  MI  GI  +  TY TL+  +++  S +    L D+MV
Sbjct: 290 YNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRLCDEMV 349

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
              + PD   YN++I  L  E   E+
Sbjct: 350 EMRLIPDTFVYNSLIYWLYMEGELEE 375


>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/643 (58%), Positives = 484/643 (75%), Gaps = 9/643 (1%)

Query: 11  KSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEF 70
           + +S   R FH GK+  +PSTEDI+ +AICVNL+QR+WK LEQ++PSLTNSLV RV+ EF
Sbjct: 9   RGSSVFRRGFHTGKKLLSPSTEDIICKAICVNLKQRRWKFLEQLSPSLTNSLVCRVIREF 68

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           R SP+LALEFY WV   + FSHSLES C +VH+LVN R F+DAL +M +L+  N  SPLE
Sbjct: 69  RNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLE 128

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            L GL++SYEIC + PAVF ALVR CTQ+ + EGAYDVI+KL+++G  V+IHAWNNFL+ 
Sbjct: 129 VLGGLMNSYEICNSNPAVFXALVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNL 188

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L+KL E  +F  +YKEM++ GY ENVNTFNL+IYALC ECKL EA+ + Y MLK  IWPN
Sbjct: 189 LLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPN 248

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV FNMII++A ++G+++ ALKL R + V+SG SV PN V +NCIINGFCK+ R+E A+ 
Sbjct: 249 VVXFNMIIDKANKMGEMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKN 308

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   MIK GID N RTYATLIDGYAR GS + A RLCDEMV+  L+P+  VYNS I+WL+
Sbjct: 309 VLGEMIKLGIDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLY 368

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            EG++E A F+LSDMI++ I PD FTYSILTKGLC +G + +A ++H  ++E  +V DA+
Sbjct: 369 MEGELEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAF 428

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YNILINY+ +S N+A AKQLLSSMIV G+ PD++TYGT +DG+CK G IE AVQ+Y+  
Sbjct: 429 TYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKA 488

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
                    V+YNSI++GLCK  S+ AAK L+   Q+ G LD +TYNTL++G+ +NG+I 
Sbjct: 489 ---------VVYNSILDGLCKQGSIYAAKLLVDKLQQNGFLDPVTYNTLLHGFCVNGEIE 539

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +AFA+F EM NVG  VN V YNI+INFLCK G  QQA ELM+ M   GIIPD +TYTTL+
Sbjct: 540 KAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLI 599

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           T F + C  E+VIELH  M+L G  PD +TY + +SP L E +
Sbjct: 600 TNFVETCGSEDVIELHGYMMLKGAVPDRKTYRSFVSPCLQEHT 642



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 31/202 (15%)

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           MI  G   ++ T+  +I   C    +  A+ V   M K+E  PN+V +N II+   K   
Sbjct: 205 MIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKMGE 264

Query: 515 LDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           +D A  L +                 N   I+G                ++ N V YN +
Sbjct: 265 MDLALKLTR-----------------NIEVISGG--------------SVSPNIVAYNCI 293

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           IN  CK    + A+ ++  MI  GI  +  TY TL+  +++  S +    L D+MV   +
Sbjct: 294 INGFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRL 353

Query: 635 SPDNQTYNAIISPLLGEKSAED 656
            PD   YN++I  L  E   E+
Sbjct: 354 IPDTFVYNSLIYWLYMEGELEE 375


>gi|297844018|ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335732|gb|EFH66149.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/652 (53%), Positives = 464/652 (71%), Gaps = 10/652 (1%)

Query: 5   FCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN 64
           F +   +  S L R FHV K+F+NP  EDI+F A+C+NL+QR+W  L Q + SLTN L++
Sbjct: 2   FAHVFSRRTSFLVRCFHVAKKFSNPEPEDILFSALCLNLKQRRWNTLHQFSSSLTNPLIS 61

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHS---LESSCAIVHLLVNWRRFDDALLLMGNLM 121
           RV+ +FR SPKLALEFY WV ENN  + S    E+SC ++HLLV+WRRFDDAL +M NLM
Sbjct: 62  RVLRQFRSSPKLALEFYNWVLENNTVAKSENRFEASCVMIHLLVDWRRFDDALSIMVNLM 121

Query: 122 S--ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           S     +SPL  L GL+ SY+ C ++  VFD+LVRACTQ G  +GAY+VI++ + +G  V
Sbjct: 122 SVEGEKLSPLHVLSGLIRSYQACGSSLDVFDSLVRACTQNGDAQGAYEVIEQTRTEGFWV 181

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+HA NNF+  L+ LNEI  FW +YKEM S GYVENVNTFNLVIY+ CKE KL EALS++
Sbjct: 182 SVHALNNFMGCLLNLNEIDWFWMVYKEMDSLGYVENVNTFNLVIYSFCKENKLFEALSVF 241

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
           YRMLK GIWPNVV FNM+I+ AC+ GD+ FAL+L  KMGVMSG+ V PN+VT+N +INGF
Sbjct: 242 YRMLKCGIWPNVVSFNMMIDGACKTGDMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGF 301

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK GR++ AE IR  M+K G+DCN RTY  L+D Y R GSS+EALRLCDEM  +GL+ N 
Sbjct: 302 CKAGRLDLAERIRGEMVKLGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANT 361

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V+YNS ++WLF EGD EGA+ VL DM+ K +  D FT +I+ +GLCRNG V +A + H Q
Sbjct: 362 VIYNSIVYWLFMEGDTEGAMMVLRDMVRKRMQIDGFTRAIVVRGLCRNGYVAEAVEFHRQ 421

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+ +V D   +N L+++  +   L    Q+L SM+V GL  D I +GTLIDGY K G 
Sbjct: 422 ISEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLVHGLGLDTILFGTLIDGYLKEGK 481

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
           +E A+ +Y+ M K+ K PNLVIYNSI+NGL K     AA++++ A +     D +TYNTL
Sbjct: 482 LERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGAAEAVVNAMES---KDTVTYNTL 538

Query: 540 INGYFINGKIAEAFAMFSEMRNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           +NG    G + EA  + S M+      +V+ V YNILIN LCKFGCY++A+E++K+M+  
Sbjct: 539 LNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHLCKFGCYEKAKEVLKIMVER 598

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           G++PD +TY TL+T FSKN   EEV+ELHD M+L GV+P    Y +I+ PLL
Sbjct: 599 GVVPDSITYGTLITSFSKNRGQEEVVELHDYMILQGVTPHEHIYQSIVRPLL 650



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
           V +  ++N++I   CK N L  A  +   M+  G+ P+++++  +IDG CK G++  A+Q
Sbjct: 215 VENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSFNMMIDGACKTGDMRFALQ 274

Query: 486 VYENMKKVEK---KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           +   M  +      PN V YNS+ING CK   LD A+ +     ++G+  +  TY  L++
Sbjct: 275 LLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGEMVKLGVDCNERTYGALVD 334

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            Y   G   EA  +  EM + G+  N V YN ++ +L   G  + A  +++ M+   +  
Sbjct: 335 AYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDMVRKRMQI 394

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           D  T   +V    +N    E +E H  +    +  D   +N ++   + +K
Sbjct: 395 DGFTRAIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFVRDK 445



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 36/311 (11%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L  EM S G V N   +N ++Y L  E   E A+ +   M++  +  +     +++   
Sbjct: 347 RLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDMVRKRMQIDGFTRAIVVRGL 406

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +  A++  R++   S   ++ + V HN +++ F +  ++   ++I  +M+  G+ 
Sbjct: 407 CRNGYVAEAVEFHRQI---SEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLVHGLG 463

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG-------- 373
            +   + TLIDGY + G  E A+ + D M+K    PN V+YNS ++ L   G        
Sbjct: 464 LDTILFGTLIDGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGAAEAV 523

Query: 374 -----------------------DVEGALFVLSDMI--DKHICPDHFTYSILTKGLCRNG 408
                                  +VE A  +LS M   D        TY+IL   LC+ G
Sbjct: 524 VNAMESKDTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHLCKFG 583

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           C ++A ++   ++E  +V D+ +Y  LI    K+       +L   MI++G+ P    Y 
Sbjct: 584 CYEKAKEVLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVELHDYMILQGVTPHEHIYQ 643

Query: 469 TLIDGYCKGGN 479
           +++     G N
Sbjct: 644 SIVRPLLDGEN 654



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 118/292 (40%), Gaps = 33/292 (11%)

Query: 366 IHWLFAEGDVEGALFVLSDMIDKH-ICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           ++ +  EG+    L VLS +I  +  C      +  L +   +NG  + A+++  Q   E
Sbjct: 118 VNLMSVEGEKLSPLHVLSGLIRSYQACGSSLDVFDSLVRACTQNGDAQGAYEVIEQTRTE 177

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
                 ++ N  +  L   N +     +   M   G + ++ T+  +I  +CK   +  A
Sbjct: 178 GFWVSVHALNNFMGCLLNLNEIDWFWMVYKEMDSLGYVENVNTFNLVIYSFCKENKLFEA 237

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGY 543
           + V+  M K    PN+V +N +I+G CK   +  A  LL                     
Sbjct: 238 LSVFYRMLKCGIWPNVVSFNMMIDGACKTGDMRFALQLL--------------------- 276

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              GK+      F       ++ N V YN +IN  CK G    A  +   M+  G+  + 
Sbjct: 277 ---GKMGVMSGNF-------VSPNAVTYNSVINGFCKAGRLDLAERIRGEMVKLGVDCNE 326

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            TY  LV  + +  S +E + L D+M   G+  +   YN+I+  L  E   E
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTE 378


>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g11710, mitochondrial; Flags: Precursor
 gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
 gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
 gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/658 (52%), Positives = 472/658 (71%), Gaps = 10/658 (1%)

Query: 5   FCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN 64
           F +   +  S L R FHV K+F+NP  EDI+F A+C+NLRQR+W  L Q + SLTN L++
Sbjct: 2   FGHVFSRRTSFLVRCFHVAKKFSNPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLIS 61

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHS---LESSCAIVHLLVNWRRFDDALLLMGNLM 121
           RV+ EFR SPKLALEFY WV  +N  + S    E+SC ++HLLV  RRFDDAL +M NLM
Sbjct: 62  RVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLM 121

Query: 122 S--ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           S     +SPL  L GL+ SY+ C ++P VFD+LVRACTQ G  +GAY+VI++ + +G  V
Sbjct: 122 SVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCV 181

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+HA NNF+  L+ +NEI RFWK+YKEM S GYVENVNTFNLVIY+ CKE KL EALS++
Sbjct: 182 SVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVF 241

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
           YRMLK G+WPNVV FNM+I+ AC+ GD+ FAL+L  KMG+MSG+ V PN+VT+N +INGF
Sbjct: 242 YRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGF 301

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK GR++ AE IR  M+K+G+DCN RTY  L+D Y R GSS+EALRLCDEM  +GL+ N 
Sbjct: 302 CKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNT 361

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V+YNS ++WLF EGD+EGA+ VL DM  K++  D FT +I+ +GLCRNG VK+A +   Q
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+ +V D   +N L+++  +   LA A Q+L SM+V+GL  D I++GTLIDGY K G 
Sbjct: 422 ISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
           +E A+++Y+ M K+ K  NLVIYNSI+NGL K     AA++++ A +   + D +TYNTL
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME---IKDIVTYNTL 538

Query: 540 INGYFINGKIAEAFAMFSEMRNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           +N     G + EA  + S+M+      +V+ V +NI+IN LCKFG Y++A+E++K M+  
Sbjct: 539 LNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVER 598

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           G++PD +TY TL+T FSK+ S E+V+ELHD ++L GV+P    Y +I+ PLL  ++  
Sbjct: 599 GVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDRENGR 656


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 218/619 (35%), Positives = 344/619 (55%), Gaps = 7/619 (1%)

Query: 31  TEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGEN-NR 89
           ++  +   + +NL+Q K   L  +   L + +V  V+ + R++ +L   F   +  N   
Sbjct: 68  SDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPN 127

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F HSL+S  A++H+LV  RR  DA  ++  ++  + VS +E +E L+ +Y  C + P VF
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           D LVR   Q        +  + LK KG  VSI+A N+ L  LVK+  +   W++Y+E+V 
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 247

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   NV T N++I ALCK  K+E   S    M + G++P+VV +N +IN  C+ G LE 
Sbjct: 248 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 307

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A +L   M  MSG  + P   T+N IING CK G+   A+ +   M+K G+  +  TY  
Sbjct: 308 AFEL---MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+    R  +  +A R+ DEM  +G++P+ V +++ I  L   G ++ AL    DM +  
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD+  Y+IL  G CRNG + +A K+ +++LE+  V D  +YN ++N LCK   L+ A 
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L + M  RG+ PD  T+ TLI+GY K GN+  AV ++E M +   KP++V YN++I+G 
Sbjct: 485 ELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 544

Query: 510 CKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           CK + ++    L     S+RI   + I+Y  LINGY   G ++EAF ++ EM   G    
Sbjct: 545 CKGSEMEKVNELWNDMISRRI-YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 603

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            +  N ++   C+ G   +A E +  M+L GI+PD +TY TL+  F K  + +    L +
Sbjct: 604 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 663

Query: 628 DMVLSGVSPDNQTYNAIIS 646
            M  SG+ PD  TYN I++
Sbjct: 664 KMENSGLLPDVITYNVILN 682



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 229/449 (51%), Gaps = 33/449 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+ A  + G  E A++++  +  KG    +  +N  ++ L K  +  R   +  EM
Sbjct: 291 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 350

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +  T+N+++   C+   + +A  ++  M   G+ P++V F+ +I    + G L
Sbjct: 351 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 410

Query: 268 EFALKLFRKM----------------------GVMSG-----DSVLPNS-----VTHNCI 295
           + ALK FR M                      GVMS      D +L        VT+N I
Sbjct: 411 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 470

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           +NG CK   +  A+E+   M + G+  +  T+ TLI+GY++ G+  +A+ L + M++R L
Sbjct: 471 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+ V YN+ I       ++E    + +DMI + I P+H +Y IL  G C  GCV +AF+
Sbjct: 531 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L ++++E+       + N ++   C++ N   A + LS+M+++G++PD ITY TLI+G+ 
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 650

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK-SLLQASQRIGLLDAI 534
           K  N++ A  +   M+     P+++ YN I+NG  +   +  A+  +L+  +R    D  
Sbjct: 651 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 710

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           TY +LING+     + EAF +  EM   G
Sbjct: 711 TYTSLINGHVTQNNLKEAFRVHDEMLQRG 739



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 141/254 (55%), Gaps = 1/254 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GL + G V  A++++ +V+   +  + Y+ NI+IN LCK+  +   K  LS M  +G
Sbjct: 225 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 284

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           + PD++TY TLI+ YC+ G +E A ++ ++M     KP +  YN+IINGLCK      AK
Sbjct: 285 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 344

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +L    +IG+  D  TYN L+     N  + +A  +F EM + G+  + V ++ LI  L
Sbjct: 345 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 404

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K GC  QA +  + M   G+ PD V YT L+  F +N    E +++ D+M+  G   D 
Sbjct: 405 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDV 464

Query: 639 QTYNAIISPLLGEK 652
            TYN I++ L  EK
Sbjct: 465 VTYNTILNGLCKEK 478



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 162/316 (51%), Gaps = 3/316 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+    + G    A  V  ++  +G  + +  +N  L+ L K   +    +L+ EM
Sbjct: 431 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 490

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  TF  +I    K+  + +A++L+  M++  + P+VV +N +I+  C+  ++
Sbjct: 491 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 550

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E   +L+  M       + PN +++  +ING+C +G V  A  +   M++ G +  + T 
Sbjct: 551 EKVNELWNDM---ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 607

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T++ GY R G++ +A      M+ +G++P+ + YN+ I+    E +++ A  +++ M +
Sbjct: 608 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 667

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  TY+++  G  R G +++A  +  +++E  +  D  +Y  LIN     NNL  
Sbjct: 668 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 727

Query: 448 AKQLLSSMIVRGLIPD 463
           A ++   M+ RG +PD
Sbjct: 728 AFRVHDEMLQRGFVPD 743



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +++L+    ++  L    +    +  +GL   I    +L+ G  K G ++ A ++Y+ + 
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +   + N+   N +IN LCK+  ++  KS L   +  G+  D +TYNTLIN Y   G + 
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EAF +   M   G+      YN +IN LCK G Y +A+ ++  M+  G+ PD  TY  L+
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
               +N +  +   + D+M   GV PD  +++A+I  LL +    DQ
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG-LLSKNGCLDQ 412



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 26/135 (19%), Positives = 67/135 (49%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +AT    + +V+   + G    A + +  + +KG       +N  ++  +K   + R + 
Sbjct: 601 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 660

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  +M + G + +V T+N+++    ++ +++EA  +  +M++ G+ P+   +  +IN   
Sbjct: 661 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 720

Query: 263 QVGDLEFALKLFRKM 277
              +L+ A ++  +M
Sbjct: 721 TQNNLKEAFRVHDEM 735


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 217/619 (35%), Positives = 343/619 (55%), Gaps = 7/619 (1%)

Query: 31  TEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGEN-NR 89
           ++  +   + +NL+Q K   L  +   L + +V  V+ + R++ +L   F   +  N   
Sbjct: 172 SDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPN 231

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F HSL+S  A++H+LV  RR  DA  ++  ++  + VS +E +E L+ +Y  C + P VF
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           D LVR   Q        +  + LK KG  VSI+A N+ L  LVK+  +   W++Y+E+V 
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   NV T N++I ALCK  K+E   S    M + G++P+VV +N +IN  C+ G LE 
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 411

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A +L   M  MSG  + P   T+N IING CK G+   A+ +   M+K G+  +  TY  
Sbjct: 412 AFEL---MDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+    R  +  +A R+ DEM  +G++P+ V +++ I  L   G ++ AL    DM +  
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD+  Y+IL  G CRNG + +A K+ +++LE+    D  +YN ++N LCK   L+ A 
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L + M  RG+ PD  T+ TLI+GY K GN+  AV ++E M +   KP++V YN++I+G 
Sbjct: 589 ELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGF 648

Query: 510 CKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           CK + ++    L     S+RI   + I+Y  LINGY   G ++EAF ++ EM   G    
Sbjct: 649 CKGSEMEKVNELWNDMISRRI-YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEAT 707

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            +  N ++   C+ G   +A E +  M+L GI+PD +TY TL+  F K  + +    L +
Sbjct: 708 IITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVN 767

Query: 628 DMVLSGVSPDNQTYNAIIS 646
            M  SG+ PD  TYN I++
Sbjct: 768 KMENSGLLPDVITYNVILN 786



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 228/449 (50%), Gaps = 33/449 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+ A  + G  E A++++  +  KG    +  +N  ++ L K  +  R   +  EM
Sbjct: 395 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 454

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +  T+N+++   C+   + +A  ++  M   G+ P++V F+ +I    + G L
Sbjct: 455 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 514

Query: 268 EFALKLFRKM----------------------GVMS-----GDSVLPNS-----VTHNCI 295
           + ALK FR M                      GVMS      D +L        VT+N I
Sbjct: 515 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           +NG CK   +  A+E+   M + G+  +  T+ TLI+GY + G+  +A+ L + M++R L
Sbjct: 575 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+ V YN+ I       ++E    + +DMI + I P+H +Y IL  G C  GCV +AF+
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L ++++E+       + N ++   C++ N   A + LS+M+++G++PD ITY TLI+G+ 
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK-SLLQASQRIGLLDAI 534
           K  N++ A  +   M+     P+++ YN I+NG  +   +  A+  +L+  +R    D  
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 814

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           TY +LING+     + EAF +  EM   G
Sbjct: 815 TYTSLINGHVTQNNLKEAFRVHDEMLQRG 843



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 141/254 (55%), Gaps = 1/254 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GL + G V  A++++ +V+   +  + Y+ NI+IN LCK+  +   K  LS M  +G
Sbjct: 329 LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKG 388

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           + PD++TY TLI+ YC+ G +E A ++ ++M     KP +  YN+IINGLCK      AK
Sbjct: 389 VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAK 448

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +L    +IG+  D  TYN L+     N  + +A  +F EM + G+  + V ++ LI  L
Sbjct: 449 GVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLL 508

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K GC  QA +  + M   G+ PD V YT L+  F +N    E +++ D+M+  G   D 
Sbjct: 509 SKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDV 568

Query: 639 QTYNAIISPLLGEK 652
            TYN I++ L  EK
Sbjct: 569 VTYNTILNGLCKEK 582



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 162/316 (51%), Gaps = 3/316 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+    + G    A  V  ++  +G  + +  +N  L+ L K   +    +L+ EM
Sbjct: 535 IYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEM 594

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  TF  +I    K+  + +A++L+  M++  + P+VV +N +I+  C+  ++
Sbjct: 595 TERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 654

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E   +L+  M       + PN +++  +ING+C +G V  A  +   M++ G +  + T 
Sbjct: 655 EKVNELWNDM---ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 711

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T++ GY R G++ +A      M+ +G++P+ + YN+ I+    E +++ A  +++ M +
Sbjct: 712 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 771

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  TY+++  G  R G +++A  +  +++E  +  D  +Y  LIN     NNL  
Sbjct: 772 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 831

Query: 448 AKQLLSSMIVRGLIPD 463
           A ++   M+ RG +PD
Sbjct: 832 AFRVHDEMLQRGFVPD 847



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +++L+    ++  L    +    +  +GL   I    +L+ G  K G ++ A ++Y+ + 
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +   + N+   N +IN LCK+  ++  KS L   +  G+  D +TYNTLIN Y   G + 
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EAF +   M   G+      YN +IN LCK G Y +A+ ++  M+  G+ PD  TY  L+
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
               +N +  +   + D+M   GV PD  +++A+I  LL +    DQ
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG-LLSKNGCLDQ 516



 Score = 45.4 bits (106), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 26/135 (19%), Positives = 67/135 (49%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +AT    + +V+   + G    A + +  + +KG       +N  ++  +K   + R + 
Sbjct: 705 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 764

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  +M + G + +V T+N+++    ++ +++EA  +  +M++ G+ P+   +  +IN   
Sbjct: 765 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 824

Query: 263 QVGDLEFALKLFRKM 277
              +L+ A ++  +M
Sbjct: 825 TQNNLKEAFRVHDEM 839


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 202/606 (33%), Positives = 313/606 (51%), Gaps = 11/606 (1%)

Query: 15  PLSRAFHVGKQFANPSTED---IVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFR 71
           P+    H      N ST+    I  +++  +++  +W +++ +AP+L+ SL++  +    
Sbjct: 34  PIIDHLHAETLHPNASTDSPLVITHQSLLDSIQSSQWHLIKHLAPNLSPSLISATLLSLH 93

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE- 130
           K   LAL+F T +G        +++ C  V ++         L L+   + +      + 
Sbjct: 94  KKSDLALQFVTHIGFKGL---DIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVKDV 150

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F E  +    +   +  VFD L+RAC ++   + A++    +K KG    I  +N  LS 
Sbjct: 151 FHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSL 210

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
            +KLN+    W LY EM        V TFN++I  LCKE KL++A      M   G+ PN
Sbjct: 211 FLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPN 270

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV +N +I+  C  G +E A  +   + +M    V P+S T+  +I+G CK G++E A  
Sbjct: 271 VVTYNTVIHGYCSRGRVEGARMV---LDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASG 327

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           I   M + G+     TY TLIDGY   G   +A    DEMV+R ++P    YN  IH LF
Sbjct: 328 ILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALF 387

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            EG ++ A  ++ DM D  I PD  TY+IL  G CR G  K+AF LH++++ + +     
Sbjct: 388 LEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLV 447

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  LI  L K N + AA  L   +I  G  PD+I +  LIDG+C  GN++ A  + + M
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
            K    P+ V YN+++ G C++  ++ A+ LL+  +R G+  D I+YNTLI+GY   G I
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +AF +  EM ++G     + YN LI  LCK      A EL+K M+  GI PD  TY +L
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 610 VTRFSK 615
           +    K
Sbjct: 628 IEGIGK 633



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 226/431 (52%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+++I A C+  + ++A   +  M + G+ P +  FN +++   ++   E    L+ +M 
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +   S +    T N +IN  CK G+++ A++   +M   G+  NV TY T+I GY   G
Sbjct: 229 RLKIKSTV---YTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E A  + D M  RG+ P++  Y S I  +   G +E A  +L  M +  + P   TY+
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G + +AF   ++++   ++    +YN+LI+ L     +  A  ++  M   
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G++PD ITY  LI+GYC+ GN + A  +++ M     +P LV Y S+I  L K   + AA
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +   R G   D I +N LI+G+  NG +  AFA+  EM    I  ++V YN L+  
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  ++AREL+K M   GI PD+++Y TL++ +SK     +   + D+M+  G +P 
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585

Query: 638 NQTYNAIISPL 648
             TYNA+I  L
Sbjct: 586 LLTYNALIQGL 596



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 185/431 (42%), Gaps = 74/431 (17%)

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + F+M+I   C++   + A + F    +M    V+P   T N +++ F KL + E    +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECF---DMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVL 223

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M +  I   V T+  +I+   + G  ++A      M   G+ PN V YN+ IH   +
Sbjct: 224 YAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCS 283

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G VEGA  VL  M ++ + P                                   D+Y+
Sbjct: 284 RGRVEGARMVLDIMKNRGVEP-----------------------------------DSYT 308

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  LI+ +CK   L  A  +L  M   GL+P  +TY TLIDGYC  G++  A    + M 
Sbjct: 309 YGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMV 368

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +    P +  YN +I+ L  +  +D A  +++     G++ D+ITYN LINGY   G   
Sbjct: 369 RRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAK 428

Query: 551 EAFAMFSEMRNVGIAVNKVGY-----------------------------------NILI 575
           +AF +  EM + GI    V Y                                   N LI
Sbjct: 429 KAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALI 488

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           +  C  G   +A  L+K M    I+PD VTY TL+    +    EE  EL  +M   G+ 
Sbjct: 489 DGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIR 548

Query: 636 PDNQTYNAIIS 646
           PD+ +YN +IS
Sbjct: 549 PDHISYNTLIS 559



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 5/254 (1%)

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYS--YNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           R   VK  F  H   +    +G   S  +++LI   C+      A +    M  +G++P 
Sbjct: 143 RVAGVKDVF--HELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPK 200

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I T+  ++  + K    E    +Y  M +++ K  +  +N +IN LCK+  L  AK  + 
Sbjct: 201 IETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIG 260

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           + + +G+  + +TYNT+I+GY   G++  A  +   M+N G+  +   Y  LI+ +CK G
Sbjct: 261 SMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGG 320

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             ++A  +++ M   G++P  VTY TL+  +       +     D+MV   + P   TYN
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYN 380

Query: 643 AIISPLLGEKSAED 656
            +I  L  E   ++
Sbjct: 381 LLIHALFLEGKMDE 394



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 59/119 (49%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L++   + G  E A ++++++K +G      ++N  +S   K  +I   + +  EM
Sbjct: 518 TYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEM 577

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +S G+   + T+N +I  LCK  + + A  L   M+  GI P+   +  +I    +V D
Sbjct: 578 LSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDD 636


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 193/529 (36%), Positives = 298/529 (56%), Gaps = 6/529 (1%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           ++  + VS +E +E L+ +Y  C + P VFD LVR   Q        +  + LK KG  V
Sbjct: 1   MVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV 60

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI+A N+ L  LVK+  +   W++Y+E+V  G   NV T N++I ALCK  K+E   S  
Sbjct: 61  SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M + G++P+VV +N +IN  C+ G LE A +L   M  MSG  + P   T+N IING 
Sbjct: 121 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFEL---MDSMSGKGLKPCVFTYNAIINGL 177

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G+   A+ +   M+K G+  +  TY  L+    R  +  +A R+ DEM  +G++P+ 
Sbjct: 178 CKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDL 237

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V +++ I  L   G ++ AL    DM +  + PD+  Y+IL  G CRNG + +A K+ ++
Sbjct: 238 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 297

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +LE+  V D  +YN ++N LCK   L+ A +L + M  RG+ PD  T+ TLI+GY K GN
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 357

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYN 537
           +  AV ++E M +   KP++V YN++I+G CK + ++    L     S+RI   + I+Y 
Sbjct: 358 MNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI-YPNHISYG 416

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LINGY   G ++EAF ++ EM   G     +  N ++   C+ G   +A E +  M+L 
Sbjct: 417 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 476

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           GI+PD +TY TL+  F K  + +    L + M  SG+ PD  TYN I++
Sbjct: 477 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 525



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 229/449 (51%), Gaps = 33/449 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+ A  + G  E A++++  +  KG    +  +N  ++ L K  +  R   +  EM
Sbjct: 134 TYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM 193

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +  T+N+++   C+   + +A  ++  M   G+ P++V F+ +I    + G L
Sbjct: 194 LKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 253

Query: 268 EFALKLFRKM----------------------GVMSG-----DSVLPNS-----VTHNCI 295
           + ALK FR M                      GVMS      D +L        VT+N I
Sbjct: 254 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 313

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           +NG CK   +  A+E+   M + G+  +  T+ TLI+GY++ G+  +A+ L + M++R L
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+ V YN+ I       ++E    + +DMI + I P+H +Y IL  G C  GCV +AF+
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L ++++E+       + N ++   C++ N   A + LS+M+++G++PD ITY TLI+G+ 
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK-SLLQASQRIGLLDAI 534
           K  N++ A  +   M+     P+++ YN I+NG  +   +  A+  +L+  +R    D  
Sbjct: 494 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRS 553

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           TY +LING+     + EAF +  EM   G
Sbjct: 554 TYTSLINGHVTQNNLKEAFRVHDEMLQRG 582



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 145/266 (54%), Gaps = 1/266 (0%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K +C      + L  GL + G V  A++++ +V+   +  + Y+ NI+IN LCK+  +  
Sbjct: 56  KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 115

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            K  LS M  +G+ PD++TY TLI+ YC+ G +E A ++ ++M     KP +  YN+IIN
Sbjct: 116 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 175

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK      AK +L    +IG+  D  TYN L+     N  + +A  +F EM + G+  
Sbjct: 176 GLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVP 235

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V ++ LI  L K GC  QA +  + M   G+ PD V YT L+  F +N    E +++ 
Sbjct: 236 DLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 295

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEK 652
           D+M+  G   D  TYN I++ L  EK
Sbjct: 296 DEMLEQGCVLDVVTYNTILNGLCKEK 321



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 162/316 (51%), Gaps = 3/316 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+    + G    A  V  ++  +G  + +  +N  L+ L K   +    +L+ EM
Sbjct: 274 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 333

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  TF  +I    K+  + +A++L+  M++  + P+VV +N +I+  C+  ++
Sbjct: 334 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 393

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E   +L+  M       + PN +++  +ING+C +G V  A  +   M++ G +  + T 
Sbjct: 394 EKVNELWNDM---ISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITC 450

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T++ GY R G++ +A      M+ +G++P+ + YN+ I+    E +++ A  +++ M +
Sbjct: 451 NTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMEN 510

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  TY+++  G  R G +++A  +  +++E  +  D  +Y  LIN     NNL  
Sbjct: 511 SGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKE 570

Query: 448 AKQLLSSMIVRGLIPD 463
           A ++   M+ RG +PD
Sbjct: 571 AFRVHDEMLQRGFVPD 586



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +++L+    ++  L    +    +  +GL   I    +L+ G  K G ++ A ++Y+ + 
Sbjct: 30  FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +   + N+   N +IN LCK+  ++  KS L   +  G+  D +TYNTLIN Y   G + 
Sbjct: 90  RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EAF +   M   G+      YN +IN LCK G Y +A+ ++  M+  G+ PD  TY  L+
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
               +N +  +   + D+M   GV PD  +++A+I  LL +    DQ
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG-LLSKNGCLDQ 255



 Score = 45.4 bits (106), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 26/135 (19%), Positives = 67/135 (49%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +AT    + +V+   + G    A + +  + +KG       +N  ++  +K   + R + 
Sbjct: 444 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFA 503

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  +M + G + +V T+N+++    ++ +++EA  +  +M++ G+ P+   +  +IN   
Sbjct: 504 LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHV 563

Query: 263 QVGDLEFALKLFRKM 277
              +L+ A ++  +M
Sbjct: 564 TQNNLKEAFRVHDEM 578


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 192/586 (32%), Positives = 312/586 (53%), Gaps = 19/586 (3%)

Query: 44  RQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESS---CAI 100
           R  +W  ++Q+  SLT SL+++ +    +SP++ L+F       N F H L  +   C  
Sbjct: 50  RSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFL------NHFHHKLSDARTLCLA 103

Query: 101 VHLLVNWRRFDDALLLMGNLM---SANSVSPL-EFLEGLLDSYEICKATPAVFDALVRAC 156
           + ++        AL L+   +   + NS+  + EFL    D       +  VFD L+++C
Sbjct: 104 IVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGF--KSSIVFDYLIKSC 161

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
             +   + A++    +K KG   +I   N+ LS  +KLN     W LY EM       +V
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            TFN++I  LCKE KL++A      M  SG+ PN+V +N I++  C  G +E A  +   
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAI--- 278

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +  M    + P+S T+  +I+G CK GR+E A +I   M++ G+  +   Y TLIDG+  
Sbjct: 279 LTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G+ + A    DEM+K+G+ P    YNS IH LF E   + A  ++ ++ +K I PD  T
Sbjct: 339 KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+IL  G CR    K+AF LH+++L   +     +Y  L++ L K N +  A  L   + 
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G++PD+I +  LIDG+C   N++GA ++ ++M +++  P+ V +N+I+ G C++  ++
Sbjct: 459 SEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A+ L    +R G+  D I++NTLI+GY   G I +AF + +EM + G     + YN L+
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             LCK      A EL+K M+  G+ PD  TY TL+   +K   P+E
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 220/431 (51%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+ +I + C   + +EA   +Y M + G+ P +   N +++   ++   E A  L+ +M 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +   S +    T N +IN  CK G+++ A++    M  +G+  N+ TY T++ GY   G
Sbjct: 214 RLRIKSSV---YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E A  +   M ++ + P++  Y S I  +  +G +E A  +  +M+ K + P    Y+
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +  A    +++L++ +     +YN LI+ L        A+ ++  +  +
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD ITY  LI+GYC+  N + A  +++ M     KP    Y S+++ L K   +  A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +     G+L D I +N LI+G+  N  +  AF +  +M  + +  ++V +N ++  
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  ++AREL   M   GI PD++++ TL++ +S+    ++   + ++M+ +G +P 
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570

Query: 638 NQTYNAIISPL 648
             TYNA++  L
Sbjct: 571 VLTYNALVQGL 581



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 177/359 (49%), Gaps = 1/359 (0%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +S+  + +I   C + R + A E  Y M + G+   + T  +L+  + +   +E A  L 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM +  +  +   +N  I+ L  EG ++ A   +  M    + P+  TY+ +  G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V+ A  +   +  + +  D+++Y  LI+ +CK   L  A ++   M+ +GL P  + Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+C  GN++ A    + M K    P +  YNS+I+ L  +   D A+ +++  Q 
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  DAITYN LINGY       +AF +  EM   GI   K  Y  L++ L K    ++
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           A +L K +   G++PD + +  L+     N + +   EL  DM    V PD  T+N I+
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 1/226 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           ++ LI   C  N    A +   +M  +G++P I T  +L+  + K    E A  +Y  M 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           ++  K ++  +N +IN LCK+  L  AK  +   +  G+  + +TYNT+++GY  +G++ 
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A A+ + M+   I  +   Y  LI+ +CK G  ++A ++ + M+  G+ P  V Y TL+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             F    + +      D+M+  G+SP   TYN++I  L  E+  ++
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDE 379



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 39/207 (18%)

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK---PNL 499
           + L+ A+ L  ++++   +P       L+     GG      +++E +     +    + 
Sbjct: 92  HKLSDARTLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSS 151

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
           ++++ +I   C     D A       +  G+L  I T N+L++ +    +   A+ +++E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M  + I  +   +NI+IN LCK G  ++A+             D+V +            
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAK-------------DFVGH------------ 246

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
                     M  SGV P+  TYN I+
Sbjct: 247 ----------METSGVKPNIVTYNTIV 263


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 192/586 (32%), Positives = 311/586 (53%), Gaps = 19/586 (3%)

Query: 44  RQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESS---CAI 100
           R  +W  ++Q+  SLT SL+++ +    +SP++ L+F       N F H L  +   C  
Sbjct: 50  RSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFL------NHFHHKLSDARTLCLA 103

Query: 101 VHLLVNWRRFDDALLLMGNLM---SANSVSPL-EFLEGLLDSYEICKATPAVFDALVRAC 156
           + ++        AL L+   +   + NS+  + EFL    D       +  VFD L+++C
Sbjct: 104 IVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGF--KSSIVFDYLIKSC 161

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
             +   + A++    +K KG   +I   N+ LS  +KLN     W LY EM       +V
Sbjct: 162 CDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSV 221

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            TFN++I  LCKE KL++A      M  SG+ PN+V +N I++  C  G +E A  +   
Sbjct: 222 YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAI--- 278

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +  M    + P+S T+  +I+G CK GR+E A +I   M++ G+  +   Y TLIDG+  
Sbjct: 279 LTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G+ + A    DEM+K+G+ P    YNS IH LF E   + A  ++ ++ +K I PD  T
Sbjct: 339 KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+IL  G CR    K+AF LH+++L   +     +Y  L++ L K N +  A  L   + 
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G++PD I +  LIDG+C   N++GA ++ ++M +++  P+ V +N+I+ G C++  ++
Sbjct: 459 SEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A+ L    +R G+  D I++NTLI+GY   G I +AF + +EM + G     + YN L+
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             LCK      A EL+K M+  G+ PD  TY TL+   +K   P+E
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 221/431 (51%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+ +I + C   + +EA   +Y M + G+ P +   N +++   ++   E A  L+ +M 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +   S +    T N +IN  CK G+++ A++    M  +G+  N+ TY T++ GY   G
Sbjct: 214 RLRIKSSV---YTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSG 270

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E A  +   M ++ + P++  Y S I  +  +G +E A  +  +M+ K + P    Y+
Sbjct: 271 RVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYN 330

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +  A    +++L++ +     +YN LI+ L        A+ ++  +  +
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD ITY  LI+GYC+  N + A  +++ M     KP    Y S+++ L K   +  A
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +     G+L DAI +N LI+G+  N  +  AF +  +M  + +  ++V +N ++  
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  ++AREL   M   GI PD++++ TL++ +S+    ++   + ++M+ +G +P 
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570

Query: 638 NQTYNAIISPL 648
             TYNA++  L
Sbjct: 571 VLTYNALVQGL 581



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 177/359 (49%), Gaps = 1/359 (0%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +S+  + +I   C + R + A E  Y M + G+   + T  +L+  + +   +E A  L 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM +  +  +   +N  I+ L  EG ++ A   +  M    + P+  TY+ +  G C +
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V+ A  +   +  + +  D+++Y  LI+ +CK   L  A ++   M+ +GL P  + Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+C  GN++ A    + M K    P +  YNS+I+ L  +   D A+ +++  Q 
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  DAITYN LINGY       +AF +  EM   GI   K  Y  L++ L K    ++
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           A +L K +   G++PD + +  L+     N + +   EL  DM    V PD  T+N I+
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 1/226 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           ++ LI   C  N    A +   +M  +G++P I T  +L+  + K    E A  +Y  M 
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           ++  K ++  +N +IN LCK+  L  AK  +   +  G+  + +TYNT+++GY  +G++ 
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A A+ + M+   I  +   Y  LI+ +CK G  ++A ++ + M+  G+ P  V Y TL+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             F    + +      D+M+  G+SP   TYN++I  L  E+  ++
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDE 379



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 39/207 (18%)

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK---PNL 499
           + L+ A+ L  ++++   +P       L+     GG      +++E +     +    + 
Sbjct: 92  HKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSS 151

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
           ++++ +I   C     D A       +  G+L  I T N+L++ +    +   A+ +++E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M  + I  +   +NI+IN LCK G  ++A+             D+V +            
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAK-------------DFVGH------------ 246

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
                     M  SGV P+  TYN I+
Sbjct: 247 ----------METSGVKPNIVTYNTIV 263


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 200/586 (34%), Positives = 307/586 (52%), Gaps = 16/586 (2%)

Query: 29  PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENN 88
           P TE+++ +++       +W  +EQ++P+LT +L++ V+      P+L  +F   +    
Sbjct: 68  PITEEVISKSVL----SSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHL---- 119

Query: 89  RFSHSLE--SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL-LDSYEICKAT 145
              H L+  S C  V LL        AL L+  +M     +  E  + L L    +   +
Sbjct: 120 -HPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKS 178

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VFD LVR C ++   + A+     +K KG    I   N+ LS  +KLN +   W LY 
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM        V TFN+++  LCKE KL++A      M   G  PNVV +N II+     G
Sbjct: 239 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           ++E A ++   M V     + P+S T+  +I+G CK GR+E A  +   M++ G+  N  
Sbjct: 299 NIEGARRILDAMRV---KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY TLIDGY   G  E A    DEMVK+G+MP+   YN  +H LF EG +  A  ++ +M
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K I PD  TY+IL  G  R G  K+AF LHN++L + +     +Y  LI  L + N +
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   ++ +G+ PD+I +  ++DG+C  GN+E A  + + M +    P+ V +N++
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           + G C++  ++ A+ LL   +R G+  D I+YNTLI+GY   G I +AF +  EM ++G 
Sbjct: 536 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
               + YN LI  LCK      A EL+K M+  GI PD  TY +L+
Sbjct: 596 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 641



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 225/428 (52%), Gaps = 4/428 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L++   C+  + +EA   +Y M + GI P +   N +++   ++  +E A  L+ +M 
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +   S +    T N ++N  CK G+++ A E    M   G   NV +Y T+I GY+  G
Sbjct: 242 RLRISSTV---YTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           + E A R+ D M  +G+ P++  Y S I  +  EG +E A  +   M++  + P+  TY+
Sbjct: 299 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +++AF   ++++++ ++    +YN+L++ L     +  A  ++  M  +
Sbjct: 359 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+IPD ITY  LI+GY + GN + A  ++  M     +P  V Y S+I  L +   +  A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +     G+  D I +N +++G+  NG +  AF +  EM    +  ++V +N L+  
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  ++AR L+  M   GI PD+++Y TL++ + +    ++   + D+M+  G +P 
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598

Query: 638 NQTYNAII 645
             TYNA+I
Sbjct: 599 LLTYNALI 606



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 220/449 (48%), Gaps = 25/449 (5%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
           N ++S F K  ++ +    WV     F   + S+    +++VN       L   G L  A
Sbjct: 218 NDMLSLFLKLNRMEM---AWVLYAEMFRLRISSTVYTFNIMVN------VLCKEGKLKKA 268

Query: 124 NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                + F+EGL       K     ++ ++   +  G  EGA  ++  ++VKG     + 
Sbjct: 269 REF--IGFMEGL-----GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 321

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           + + +S + K   +     L+ +MV  G V N  T+N +I   C +  LE A S    M+
Sbjct: 322 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 381

Query: 244 KSGIWPNVVCFNMIINE---ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           K GI P+V  +N++++      ++G+ +  +K  RK G+      +P+++T+N +ING+ 
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI------IPDAITYNILINGYS 435

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           + G  + A ++   M+  GI+    TY +LI   +R    +EA  L ++++ +G+ P+ +
Sbjct: 436 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 495

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           ++N+ +    A G+VE A  +L +M  K + PD  T++ L +G CR G V++A  L +++
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 555

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
               +  D  SYN LI+   +  ++  A ++   M+  G  P ++TY  LI   CK    
Sbjct: 556 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 615

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           + A ++ + M      P+   Y S+I G+
Sbjct: 616 DLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 188/406 (46%), Gaps = 39/406 (9%)

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + F++++   C++   + A K F    +M    ++P   T N +++ F KL R+E A  +
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFY---MMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVL 236

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M +  I   V T+  +++   + G  ++A      M   G  PN V YN+ IH   +
Sbjct: 237 YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 296

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G++EGA  +L  M  K I PD                                   +Y+
Sbjct: 297 RGNIEGARRILDAMRVKGIEPD-----------------------------------SYT 321

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  LI+ +CK   L  A  L   M+  GL+P+ +TY TLIDGYC  G++E A    + M 
Sbjct: 322 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 381

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           K    P++  YN +++ L  +  +  A  +++  ++ G++ DAITYN LINGY   G   
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 441

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +AF + +EM + GI    V Y  LI  L +    ++A +L + ++  G+ PD + +  +V
Sbjct: 442 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                N + E    L  +M    V PD  T+N ++     E   E+
Sbjct: 502 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE 547


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  324 bits (830), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 200/586 (34%), Positives = 307/586 (52%), Gaps = 16/586 (2%)

Query: 29  PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENN 88
           P TE+++ +++       +W  +EQ++P+LT +L++ V+      P+L  +F   +    
Sbjct: 46  PITEEVISKSVL----SSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHL---- 97

Query: 89  RFSHSLE--SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL-LDSYEICKAT 145
              H L+  S C  V LL        AL L+  +M     +  E  + L L    +   +
Sbjct: 98  -HPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVKS 156

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VFD LVR C ++   + A+     +K KG    I   N+ LS  +KLN +   W LY 
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM        V TFN+++  LCKE KL++A      M   G  PNVV +N II+     G
Sbjct: 217 EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           ++E A ++   M V     + P+S T+  +I+G CK GR+E A  +   M++ G+  N  
Sbjct: 277 NIEGARRILDAMRV---KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY TLIDGY   G  E A    DEMVK+G+MP+   YN  +H LF EG +  A  ++ +M
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K I PD  TY+IL  G  R G  K+AF LHN++L + +     +Y  LI  L + N +
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   ++ +G+ PD+I +  ++DG+C  GN+E A  + + M +    P+ V +N++
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           + G C++  ++ A+ LL   +R G+  D I+YNTLI+GY   G I +AF +  EM ++G 
Sbjct: 514 MQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
               + YN LI  LCK      A EL+K M+  GI PD  TY +L+
Sbjct: 574 NPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 225/428 (52%), Gaps = 4/428 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L++   C+  + +EA   +Y M + GI P +   N +++   ++  +E A  L+ +M 
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +   S +    T N ++N  CK G+++ A E    M   G   NV +Y T+I GY+  G
Sbjct: 220 RLRISSTV---YTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           + E A R+ D M  +G+ P++  Y S I  +  EG +E A  +   M++  + P+  TY+
Sbjct: 277 NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +++AF   ++++++ ++    +YN+L++ L     +  A  ++  M  +
Sbjct: 337 TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+IPD ITY  LI+GY + GN + A  ++  M     +P  V Y S+I  L +   +  A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +     G+  D I +N +++G+  NG +  AF +  EM    +  ++V +N L+  
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  ++AR L+  M   GI PD+++Y TL++ + +    ++   + D+M+  G +P 
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576

Query: 638 NQTYNAII 645
             TYNA+I
Sbjct: 577 LLTYNALI 584



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 220/449 (48%), Gaps = 25/449 (5%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
           N ++S F K  ++ +    WV     F   + S+    +++VN       L   G L  A
Sbjct: 196 NDMLSLFLKLNRMEM---AWVLYAEMFRLRISSTVYTFNIMVN------VLCKEGKLKKA 246

Query: 124 NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                + F+EGL       K     ++ ++   +  G  EGA  ++  ++VKG     + 
Sbjct: 247 REF--IGFMEGL-----GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 299

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           + + +S + K   +     L+ +MV  G V N  T+N +I   C +  LE A S    M+
Sbjct: 300 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 359

Query: 244 KSGIWPNVVCFNMIINE---ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           K GI P+V  +N++++      ++G+ +  +K  RK G+      +P+++T+N +ING+ 
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI------IPDAITYNILINGYS 413

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           + G  + A ++   M+  GI+    TY +LI   +R    +EA  L ++++ +G+ P+ +
Sbjct: 414 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 473

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           ++N+ +    A G+VE A  +L +M  K + PD  T++ L +G CR G V++A  L +++
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 533

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
               +  D  SYN LI+   +  ++  A ++   M+  G  P ++TY  LI   CK    
Sbjct: 534 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 593

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           + A ++ + M      P+   Y S+I G+
Sbjct: 594 DLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 188/406 (46%), Gaps = 39/406 (9%)

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + F++++   C++   + A K F    +M    ++P   T N +++ F KL R+E A  +
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFY---MMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVL 214

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M +  I   V T+  +++   + G  ++A      M   G  PN V YN+ IH   +
Sbjct: 215 YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 274

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G++EGA  +L  M  K I PD                                   +Y+
Sbjct: 275 RGNIEGARRILDAMRVKGIEPD-----------------------------------SYT 299

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  LI+ +CK   L  A  L   M+  GL+P+ +TY TLIDGYC  G++E A    + M 
Sbjct: 300 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 359

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           K    P++  YN +++ L  +  +  A  +++  ++ G++ DAITYN LINGY   G   
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 419

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +AF + +EM + GI    V Y  LI  L +    ++A +L + ++  G+ PD + +  +V
Sbjct: 420 KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                N + E    L  +M    V PD  T+N ++     E   E+
Sbjct: 480 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE 525


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 203/620 (32%), Positives = 323/620 (52%), Gaps = 5/620 (0%)

Query: 39  ICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGEN-NRFSHSLESS 97
           I   L+Q     L      L+ SL+ +V+   R    L L+F   V  +   F HS  S 
Sbjct: 79  ILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSL 138

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
            A+VH LV  RR  +A   +  ++  + VS ++ +E L+ +     +   ++D LVR   
Sbjct: 139 SAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYV 198

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           Q        +  Q L+ KG SVSI+A N  L  LV+   +   W++Y E+V  G   NV 
Sbjct: 199 QAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVY 258

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T N+++ ALCK+ K E  +     M   G++ ++V +N +IN  C+ G +E A +L   +
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQL---L 315

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
              S   + P  +T+N I+ G CK+G+ + A+++   M++ G+  N  TY TL+    R 
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            +  EA  + DEM +RG++P+ V ++S I  L   G +  AL    +M    I PD+  Y
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +IL  G CRNG +  A K+ +++L      D  +YN  +N LCK    A A  L + M+ 
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVE 495

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RG++PD  T+ TLI GYCK GN++ A+ ++E M +   KP+ V YN++I+G CK   +  
Sbjct: 496 RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGR 555

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           AK L     R  ++ D I+Y T++NG+  +G + EA  +  +M   GI  N V  N LI 
Sbjct: 556 AKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C+ G   +A E +  MI +GIIPD  +Y TL+  + K  + E+   L ++M   G+  
Sbjct: 616 GYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQF 675

Query: 637 DNQTYNAIISPLLGEKSAED 656
           +  TYN I++    E   ++
Sbjct: 676 NIITYNLILNGFCAEGKMQE 695



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 230/433 (53%), Gaps = 6/433 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LL+S+      P +  ++A++    +IG  + A DV+ ++   G + +   +N  L  + 
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           + + I    +++ EM   G + ++ +F+ +I  L +   L +AL  +  M +SGI P+ V
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            + ++I+  C+ G L  ALK+  +M          + VT+N  +NG CK      A+ + 
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEM---LARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M++ G+  +  T+ TLI GY + G+ ++AL L + MV+  L P+ V YN+ I      
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G++  A  +  DMI K I PDH +Y  +  G C +G + +A  L +Q+LE+ +  +  + 
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N LI   C+S ++  A + LS MI  G+IPD  +Y TLIDGY K  N+E A  +   M+K
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
              + N++ YN I+NG C +  +  A+ +L+    IG+  D  TY++LING+     + E
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730

Query: 552 AFAMFSEMRNVGI 564
           AF    EM   G+
Sbjct: 731 AFRFHDEMLQRGL 743



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 167/316 (52%), Gaps = 3/316 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+    + GA   A  +  ++  +G  + +  +N FL+ L K         L+ EM
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G V +  TF  +I   CK+  +++AL+L+  M+++ + P+ V +N +I+  C+ G++
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +L+  M       ++P+ +++  ++NGFC  G +  A  +   M++ GI  N+ T 
Sbjct: 554 GRAKELWDDM---IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI GY R G   +A     +M+  G++P++  YN+ I     E ++E A  ++++M  
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  +  TY+++  G C  G +++A ++  +++E  +  D  +Y+ LIN     +N+  
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730

Query: 448 AKQLLSSMIVRGLIPD 463
           A +    M+ RGL+PD
Sbjct: 731 AFRFHDEMLQRGLVPD 746


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 203/624 (32%), Positives = 324/624 (51%), Gaps = 5/624 (0%)

Query: 35  VFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGEN-NRFSHS 93
           +   I   L+Q     L      L+ SL+ +V+   R    L L+F   V  +   F HS
Sbjct: 75  LLEKILFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHS 134

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV 153
             S  A+VH LV  RR  +A   +  ++  + VS ++ +E L+ +     +   ++D LV
Sbjct: 135 SLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLV 194

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
           R   Q        +  Q L+ KG SVSI+A N  L  LV+   +   W++Y E+V  G  
Sbjct: 195 RTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIE 254

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            NV T N+++ ALCK+ K E  +     M   G++ ++V +N +IN  C+ G +E A +L
Sbjct: 255 LNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQL 314

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
              +   S   + P  +T+N I+ G CK+G+ + A+++   M++ G+  N  TY TL+  
Sbjct: 315 ---LNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             R  +  EA  + DEM +RG++P+ V ++S I  L   G +  AL    +M    I PD
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           +  Y+IL  G CRNG +  A K+ +++L      D  +YN  +N LCK    A A  L +
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFN 491

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+ RG++PD  T+ TLI GYCK GN++ A+ ++E M +   KP+ V YN++I+G CK  
Sbjct: 492 EMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +  AK L     R  ++ D I+Y T++NG+  +G + EA  +  +M   GI  N V  N
Sbjct: 552 EMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCN 611

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI   C+ G   +A E +  MI +GIIPD  +Y TL+  + K  + E+   L ++M   
Sbjct: 612 TLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
           G+  +  TYN I++    E   ++
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQE 695



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 230/433 (53%), Gaps = 6/433 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LL+S+      P +  ++A++    +IG  + A DV+ ++   G + +   +N  L  + 
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           + + I    +++ EM   G + ++ +F+ +I  L +   L +AL  +  M +SGI P+ V
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            + ++I+  C+ G L  ALK+  +M          + VT+N  +NG CK      A+ + 
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEM---LARGCFMDVVTYNTFLNGLCKKKMFADADMLF 490

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M++ G+  +  T+ TLI GY + G+ ++AL L + MV+  L P+ V YN+ I      
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA 550

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G++  A  +  DMI K I PDH +Y  +  G C +G + +A  L +Q+LE+ +  +  + 
Sbjct: 551 GEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N LI   C+S ++  A + LS MI  G+IPD  +Y TLIDGY K  N+E A  +   M+K
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
              + N++ YN I+NG C +  +  A+ +L+    IG+  D  TY++LING+     + E
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730

Query: 552 AFAMFSEMRNVGI 564
           AF    EM   G+
Sbjct: 731 AFRFHDEMLQRGL 743



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 167/316 (52%), Gaps = 3/316 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+    + GA   A  +  ++  +G  + +  +N FL+ L K         L+ EM
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G V +  TF  +I   CK+  +++AL+L+  M+++ + P+ V +N +I+  C+ G++
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +L+  M       ++P+ +++  ++NGFC  G +  A  +   M++ GI  N+ T 
Sbjct: 554 GRAKELWDDM---IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTC 610

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI GY R G   +A     +M+  G++P++  YN+ I     E ++E A  ++++M  
Sbjct: 611 NTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEK 670

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  +  TY+++  G C  G +++A ++  +++E  +  D  +Y+ LIN     +N+  
Sbjct: 671 RGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKE 730

Query: 448 AKQLLSSMIVRGLIPD 463
           A +    M+ RGL+PD
Sbjct: 731 AFRFHDEMLQRGLVPD 746


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  318 bits (814), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 192/589 (32%), Positives = 315/589 (53%), Gaps = 9/589 (1%)

Query: 25  QFANPS-TEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTW 83
           Q  +PS   ++  R I   +   +W  ++ +A  +T SL++  ++   K+P LA +F T 
Sbjct: 1   QTLSPSIPTELTPRTILDLIHSSQWHFIKHLAHKITPSLISTALTSLHKTPDLAFQFVTH 60

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK 143
           +G  +     ++S C  + ++ +      +L L+   +++   S  E    L  +  +  
Sbjct: 61  IGFGDL---DIKSKCLAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLG 117

Query: 144 -ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
             T  ++D L+RAC ++   + A++    +K KG    +HA N+ LS  +K N   + W 
Sbjct: 118 IKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWV 177

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LY EM       +V TFN++I  LCKE KL++A      M   GI PNVV +N II+  C
Sbjct: 178 LYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYC 237

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G +E A  +F    +M    V P+S T+   I+G CK G++E A  +   M + G+  
Sbjct: 238 SRGRVEGARMIF---DLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRP 294

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
              TY TLIDGY   G+ E A    D+MV+ GLMP    YN  IH LF +  ++ A  ++
Sbjct: 295 TAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGII 354

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M +K + PD  TY+IL  G CR G VK+AF LH++++ + +     +Y  LI  L K 
Sbjct: 355 KEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKR 414

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  L   ++ +G+ PD+I +  LIDG+C  GN++ A  + + M +++  P+ V +
Sbjct: 415 GRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTF 474

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N+++ G C++  ++AA+ L++  +  G+  D I+YNTLI+GY   G + +AF +  EM +
Sbjct: 475 NTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLS 534

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +G     + YN LI  LCK      A +L+K MI  GI P+  TY +L+
Sbjct: 535 IGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 229/431 (53%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++L+I A C+  + ++A   +  M   G+ P+V   N +++   +    E A  L+ +M 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M   S +   VT N +IN  CK G+++ A+E    M   GI  NV TY T+I GY   G
Sbjct: 184 RMRIKSSV---VTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRG 240

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E A  + D M  RG+ P++  Y S I  +  EG +E A  +L  M +  + P   TY+
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G ++ AF   ++++ E ++    +YN+LI+ L     +  A  ++  M  +
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL+PD +TY  LI+GYC+ GN++ A  +++ M     +P  V Y S+I  L K   +  A
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +   R G+  D I +N LI+G+  NG +  AFAM  EM  + +  ++V +N L+  
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG 480

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  + AREL++ M   GI PD+++Y TL++ +SK    ++   + D+M+  G +P 
Sbjct: 481 RCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPT 540

Query: 638 NQTYNAIISPL 648
             TYNA+I  L
Sbjct: 541 LLTYNALIQGL 551



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 218/449 (48%), Gaps = 25/449 (5%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
           N ++S F KS +       WV     F   ++SS    ++++N       L   G L  A
Sbjct: 160 NDMLSLFLKSNRTE---KAWVLYAEMFRMRIKSSVVTFNIMIN------VLCKEGKLKKA 210

Query: 124 NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                 EF+ GL+++  I K     ++ ++      G  EGA  +   +K +G     + 
Sbjct: 211 K-----EFI-GLMEALGI-KPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYT 263

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           + +F+S + K  ++     + ++M   G      T+N +I   C +  LE A     +M+
Sbjct: 264 YGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMV 323

Query: 244 KSGIWPNVVCFNMIINE---ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           + G+ P V  +NM+I+     C++ + +  +K       MS   ++P+SVT+N +ING+C
Sbjct: 324 REGLMPTVSTYNMLIHALFLDCKMDEADGIIK------EMSEKGLVPDSVTYNILINGYC 377

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           + G V+ A  +   MI  GI     TY +LI   ++ G  ++A  L +++V++G+ P+ +
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           ++N+ I    A G+++ A  +L +M    + PD  T++ L +G CR G V+ A +L  ++
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
               +  D  SYN LI+   K  ++  A ++   M+  G  P ++TY  LI G CK    
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEG 557

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           + A Q+ + M      PN   Y S+I G+
Sbjct: 558 DHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 186/385 (48%), Gaps = 1/385 (0%)

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++F ++GV  G   +   V ++ +I   C+L R + A E    M   G+  +V     ++
Sbjct: 104 EVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDML 163

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
             + +   +E+A  L  EM +  +  + V +N  I+ L  EG ++ A   +  M    I 
Sbjct: 164 SLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIK 223

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ +  G C  G V+ A  + + +    +  D+Y+Y   I+ +CK   L  A  +
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M   GL P  +TY TLIDGYC  GN+E A    + M +    P +  YN +I+ L  
Sbjct: 284 LEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL 343

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           D  +D A  +++     GL+ D++TYN LINGY   G + +AF +  EM + GI   +V 
Sbjct: 344 DCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LI  L K G  +QA +L + ++  GI PD + +  L+     N + +    +  +M 
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
              V PD  T+N ++     E   E
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVE 488



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 1/158 (0%)

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
           V+Y+ +I   C+    D A       +  G++  +   N +++ +  + +  +A+ +++E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M  + I  + V +NI+IN LCK G  ++A+E + +M   GI P+ VTY T++  +     
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            E    + D M   GV PD+ TY + IS +  E   E+
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  308 bits (788), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 184/544 (33%), Positives = 289/544 (53%), Gaps = 6/544 (1%)

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           V  +R  DA  L+  ++  + VS +E +E L+     C     VFD L+R+  Q      
Sbjct: 74  VRSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNE 133

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
             D  + L+ KG  VSI+A N+ L  LVK+  +   W++Y E+   G   NV T N+++ 
Sbjct: 134 GTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVN 193

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           ALCK+ K+++       M + GI+ ++V +N +IN  C+ G L  A   F  M  MSG  
Sbjct: 194 ALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEA---FEVMNSMSGKG 250

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P   T+N +ING CK GR   A+ +   M+  G+  +  TY TL+    R  +  EA 
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            +  +M+ RG+ P+ + ++S I      G ++ AL    DM    + PD+  Y+IL  G 
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           CRNG + +A ++ +++LE+    D  +YN ++N LCK   LA A  L   M+ RG++PD 
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            T+ TLI G+CK GN+  A+ ++  M +   KP++V YN +I+G CK   ++ A  L   
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490

Query: 525 --SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             S++I   + I+Y  L+NGY   G ++EAF ++ EM   GI    V  N +I   C+ G
Sbjct: 491 MISRKI-FPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSG 549

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A E +  MI  G+ PD +TY TL+  F K    ++   L + M   G+ PD  TYN
Sbjct: 550 DLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYN 609

Query: 643 AIIS 646
            I++
Sbjct: 610 VILN 613



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 226/456 (49%), Gaps = 39/456 (8%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    ++ L+ A  + G    A++V+  +  KG   ++  +N  ++ L K     R   +
Sbjct: 218 ADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EM+S G   +  T+N ++   C+     EA  ++  ML  G+ P+++ F+ +I  + +
Sbjct: 278 FNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSR 337

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G L+ AL  FR M       ++P++V +  +ING+C+ G +  A EIR  M++ G   +
Sbjct: 338 NGHLDQALMYFRDMKT---SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL- 382
           V  Y T+++G  +     +A  L DEMV+RG++P+   + + IH    EG++  AL +  
Sbjct: 395 VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFG 454

Query: 383 ----------------------------------SDMIDKHICPDHFTYSILTKGLCRNG 408
                                             ++MI + I P+H +Y+IL  G C  G
Sbjct: 455 IMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLG 514

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V +AF+L ++++ + +     + N +I   C+S +L+ A + L  MI  G+ PD ITY 
Sbjct: 515 FVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYN 574

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLI+G+ KG  ++ A  +   M+    +P++V YN I+NG C+   +  A+ +L+     
Sbjct: 575 TLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIER 634

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           G+  D  TY TLINGY     + EAF    EM   G
Sbjct: 635 GIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRG 670



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 167/317 (52%), Gaps = 3/317 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            ++  L+    + G    A ++  K+  +G ++ + A+N  L+ L K   +     L+ E
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G V +  TF  +I+  CKE  + +ALSL+  M +  I P++V +N++I+  C+  +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A +L+ +M       + PN +++  ++NG+C LG V  A  +   MI+ GI   + T
Sbjct: 481 MEKANELWNEM---ISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVT 537

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
             T+I GY R G   +A     +M+  G+ P+++ YN+ I+       ++ A F+++ M 
Sbjct: 538 CNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKME 597

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K + PD  TY+++  G CR G +++A  +  +++E  +  D  +Y  LIN     +NL 
Sbjct: 598 TKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLK 657

Query: 447 AAKQLLSSMIVRGLIPD 463
            A +    M+ RG +PD
Sbjct: 658 EAFRFHDEMLQRGFVPD 674



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GL + G V  A++++N++    +  + Y+ NI++N LCK + +   K  L  M  +G
Sbjct: 156 LLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKG 215

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  DI+TY TLI+ YC+ G +  A +V  +M     KP L  YN++INGLCK      AK
Sbjct: 216 IFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAK 275

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +      IGL  D  TYNTL+     N    EA  +FS+M + G++ + + ++ LI   
Sbjct: 276 GVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVS 335

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            + G   QA    + M   G++PD V YT L+  + +N    E +E+ D M+  G + D 
Sbjct: 336 SRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDV 395

Query: 639 QTYNAIISPLLGEKSAED 656
             YN I++ L  +K   D
Sbjct: 396 VAYNTILNGLCKKKLLAD 413


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 183/550 (33%), Positives = 298/550 (54%), Gaps = 7/550 (1%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EICKATPAVFDALVRACTQ 158
           +VH+ V  RR  DA  L+  ++  + VS +E +E L+ S    C     VFD L+R   Q
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
                   +  + L+ KG+ VSI+A N+ L  LVK++ +   W++++E+V  G   NV T
Sbjct: 61  ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            N+++ ALCK+ K ++  S    M  +GI+ ++V +N +I   C+ G LE A   F  M 
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEA---FEIMN 177

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M+   + P+  T+N IING CK GR   A+ I   M+  G+  +  TY TL+    R  
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +  EA  +  EM+++G++P+ V ++S I        ++ AL    DM    + PD+  Y+
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYT 297

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           +L  G CRNG + +A K+ +++LE+  V D  +YN ++N LCK   L  A +L   M+ R
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G +PD  T+ TLI G+C+ GN+  A+ ++  M +   KP++V YN++I+G CK   ++ A
Sbjct: 358 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417

Query: 519 KSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
             L     S++I   + ITY  LIN Y   G ++EAF ++  M   GI    V  N +I 
Sbjct: 418 SELWDGMISRKI-FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 476

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C+ G   +A E +  MI  G+ PD+++Y TL+  F +  + ++     + M   G+ P
Sbjct: 477 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLP 536

Query: 637 DNQTYNAIIS 646
           D  TYN +++
Sbjct: 537 DIITYNVVMN 546



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 220/459 (47%), Gaps = 33/459 (7%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    ++ L+ A  + G  E A++++  +  KG   S+  +N  ++ L K     R   +
Sbjct: 151 ADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGI 210

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             EM++ G   +  T+N ++   C+     EA  ++  ML+ G+ P++V F+ +I    +
Sbjct: 211 LIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSR 270

Query: 264 VGDLEFALKLFRKMG-------------VMSG--------------DSVLPNS-----VT 291
              L+ AL  FR M              +M G              D +L        + 
Sbjct: 271 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N I+NG CK   +  A+++   M++ G   +  T+ TLI G+ + G+  +AL L   M 
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +R + P+ V YN+ I      G++E A  +   MI + I P+H TY IL    C  G V 
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 450

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF+L + ++E+ +     + N +I   C+S + + A + L  MI +G+ PD I+Y TLI
Sbjct: 451 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 510

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           +G+ +  N++ A      M+K    P+++ YN ++NG C+   +  A+ +L+     G+ 
Sbjct: 511 NGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGIN 570

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
            D  TY  LING+     + EAF    EM   G A + V
Sbjct: 571 PDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 132/258 (51%), Gaps = 1/258 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GL +   V+ A+++H +V+   +  + Y+ NI++N LCK       K  LS M   G
Sbjct: 89  LLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNG 148

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  D++TY TLI  YC+ G +E A ++  +M     KP+L  YN+IINGLCK      AK
Sbjct: 149 IYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAK 208

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +L     IGL  D  TYNTL+         +EA  +F EM   G+  + V ++ LI   
Sbjct: 209 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVF 268

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            +     QA    + M   G++PD V YT L+  + +N +  E +++ D+M+  G   D 
Sbjct: 269 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 328

Query: 639 QTYNAIISPLLGEKSAED 656
             YN I++ L  EK   D
Sbjct: 329 IAYNTILNGLCKEKMLTD 346


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 197/587 (33%), Positives = 309/587 (52%), Gaps = 8/587 (1%)

Query: 26  FANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVG 85
           F+ P+T  +    +  ++   +W  +EQ+AP LT SL++  ++  R +P+L L   + + 
Sbjct: 28  FSIPTT--LTESTLLHSIESSQWHFIEQVAPHLTPSLLSSTLTTLRHNPQLVLHLLSHL- 84

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL-MSANSVSPLEFLEGLLDSYEICKA 144
           +N+  S  L +S   + +L        ++ L+  L +S    +   F E  L    +   
Sbjct: 85  QNHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPTCTNRTIFDELALARDRVDAK 144

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T  +FD LVRA  ++     A +    +K KG   +I   N  LS  +KLN     W LY
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            EM       ++ TFN++I  LCKE KL++A      M   G+ PNVV +N II+  C  
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G  + A  +F+    M    + P+  T+N  I+G CK GR+E A  +   M++ G+  N 
Sbjct: 265 GKFQRARVIFQ---TMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LIDGY   G  ++A    DEM+ +G+M + V YN  IH LF EG +  A  ++ +
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M +K + PD  T++IL  G CR G  K+AF L ++++ + +     +Y  LI  L K N 
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A  L S +   GL+PDII +  LIDG+C  GNI+ A Q+ + M  ++  P+ + YN+
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           ++ G C++  ++ A+ LL   +R G+  D I+YNTLI+GY   G + +AF +  EM   G
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
                + YN LI  LCK    + A EL+K M+  GI PD  TY +++
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 234/438 (53%), Gaps = 4/438 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L++ A C+  K  EAL  +Y + + G  PN+   N +++   ++   + A  L+ +M 
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M+  S L    T N +IN  CK G+++ A+E    M   G+  NV TY T+I G+   G
Sbjct: 209 RMNIRSSL---YTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             + A  +   M  +GL P+   YNS I  L  EG +E A  ++  M++  + P+  TY+
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G + +A+   ++++ + ++    +YN+ I+ L     +  A  ++  M  +
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G++PD +T+  LI+GYC+ G+ + A  + + M     +P LV Y S+I  L K   +  A
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +L    Q+ GLL D I +N LI+G+  NG I  AF +  EM N+ +  +++ YN L+  
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  ++AR+L+  M   GI PD+++Y TL++ +SK    ++   + D+M+ +G  P 
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 638 NQTYNAIISPLLGEKSAE 655
             TYNA+I  L   +  E
Sbjct: 566 ILTYNALIQGLCKNQEGE 583



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 222/485 (45%), Gaps = 51/485 (10%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
           +L   L+ R   E +K P  ALE +  + E   F  ++E+   ++ L +   R   A +L
Sbjct: 146 TLIFDLLVRAYCELKK-PNEALECFYLIKEKG-FVPNIETCNQMLSLFLKLNRTQMAWVL 203

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
              +   N  S L                   F+ ++    + G  + A + I  ++  G
Sbjct: 204 YAEMFRMNIRSSL-----------------YTFNIMINVLCKEGKLKKAKEFIGHMETLG 246

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
              ++  +N  +       +  R   +++ M   G   +  T+N  I  LCKE +LEEA 
Sbjct: 247 VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEAS 306

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMS------------ 281
            L  +ML+ G+ PN V +N +I+  C  GDL+ A     +M   G+M+            
Sbjct: 307 GLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHAL 366

Query: 282 ------GDS-----------VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
                 GD+           ++P++VTHN +ING+C+ G  + A  +   M+  GI   +
Sbjct: 367 FMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTL 426

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY +LI    +    +EA  L  ++ + GL+P+ +V+N+ I    A G+++ A  +L +
Sbjct: 427 VTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKE 486

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M +  + PD  TY+ L +G CR G V++A +L +++    +  D  SYN LI+   K  +
Sbjct: 487 MDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGD 546

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A ++   M+  G  P I+TY  LI G CK    E A ++ + M      P+   Y S
Sbjct: 547 MKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLS 606

Query: 505 IINGL 509
           II  +
Sbjct: 607 IIEAM 611


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 183/612 (29%), Positives = 319/612 (52%), Gaps = 10/612 (1%)

Query: 39  ICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGEN-NRFSHSLESS 97
           IC +L+Q    +   +   L    V  V+   R    L   F   +G N   F H+  S 
Sbjct: 48  ICFSLKQGNSNVRNHLI-RLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSL 106

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
            A++H+LV   R  DA   +  ++  + VS +E +  L+ +Y  C +  +VFD L+R   
Sbjct: 107 SAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFV 166

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           Q      AY+    L+ KG++VSI A N  +  LV++  +   W++Y+E+   G   NV 
Sbjct: 167 QARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVY 226

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T N+++ ALCK+ K+E+  +    + + G++P++V +N +I+     G +E A +L   M
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFEL---M 283

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M      P   T+N +ING CK G+ E A+E+   M+++G+  +  TY +L+    + 
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 343

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G + E   +  +M  R ++P+ V ++S +      G+++ AL   + + +  + PD+  Y
Sbjct: 344 GDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 403

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +IL +G CR G + +A  L N++L++    D  +YN +++ LCK   L  A +L + M  
Sbjct: 404 TILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 463

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RGL PD  T   LIDG+CK GN++ A+++++ MK+   K ++V YN++++G  K   +D 
Sbjct: 464 RGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDT 523

Query: 518 AKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
           AK +     S+ I L   I+++ L+N     G ++EAF ++ EM +  I    +  N +I
Sbjct: 524 AKEIWADMVSKEI-LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMI 582

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM--VLSG 633
              C+ G        ++ MI  G +PD ++Y TL+  F K  +  +   L   M     G
Sbjct: 583 KGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGG 642

Query: 634 VSPDNQTYNAII 645
           + PD  TYN+I+
Sbjct: 643 LVPDVFTYNSIL 654



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 115/243 (47%), Gaps = 36/243 (14%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+    ++G  + A ++ +K+K K   + +  +N  L    K+ +I    +++ +MVS  
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD----- 266
            +    +F++++ ALC +  L EA  ++  M+   I P V+  N +I   C+ G+     
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595

Query: 267 ------------------------------LEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
                                         +  A  L +KM    G  ++P+  T+N I+
Sbjct: 596 IFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG-GLVPDVFTYNSIL 654

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +GFC+  +++ AE +   MI+ G++ +  TY +LI+G+    +  EA R  DEM++RG  
Sbjct: 655 HGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFS 714

Query: 357 PNN 359
           P++
Sbjct: 715 PDD 717


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 170/560 (30%), Positives = 298/560 (53%), Gaps = 8/560 (1%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F H+  S  A++H+LV   R  DA   +  ++  + VS LE +  L  ++  C +  +VF
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           D L+R   Q      A++    L+ KG +VSI A N  +  LV++  +   W +Y+E+  
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   NV T N+++ ALCK+ K+E+  +   ++ + G++P++V +N +I+     G +E 
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A +L   M  M G    P   T+N +ING CK G+ E A+E+   M+++G+  +  TY +
Sbjct: 289 AFEL---MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+    + G   E  ++  +M  R ++P+ V ++S +      G+++ AL   + + +  
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD+  Y+IL +G CR G +  A  L N++L++    D  +YN +++ LCK   L  A 
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L + M  R L PD  T   LIDG+CK GN++ A+++++ MK+   + ++V YN++++G 
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525

Query: 510 CKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            K   +D AK +     S+ I L   I+Y+ L+N     G +AEAF ++ EM +  I   
Sbjct: 526 GKVGDIDTAKEIWADMVSKEI-LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            +  N +I   C+ G        ++ MI  G +PD ++Y TL+  F +  +  +   L  
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644

Query: 628 DM--VLSGVSPDNQTYNAII 645
            M     G+ PD  TYN+I+
Sbjct: 645 KMEEEQGGLVPDVFTYNSIL 664



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 213/449 (47%), Gaps = 6/449 (1%)

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           +CG   N + F+L+I    +  KL EA   +  +   G   ++   N +I    ++G +E
Sbjct: 160 NCG--SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE 217

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +++++   S   V  N  T N ++N  CK G++E        + + G+  ++ TY 
Sbjct: 218 LAWGVYQEI---SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI  Y+  G  EEA  L + M  +G  P    YN+ I+ L   G  E A  V ++M+  
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD  TY  L    C+ G V +  K+ + +    +V D   ++ +++   +S NL  A
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
               +S+   GLIPD + Y  LI GYC+ G I  A+ +   M +     ++V YN+I++G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454

Query: 509 LCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK   L  A  L  + ++R    D+ T   LI+G+   G +  A  +F +M+   I ++
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V YN L++   K G    A+E+   M+   I+P  ++Y+ LV          E   + D
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +M+   + P     N++I       +A D
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASD 603



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/501 (24%), Positives = 242/501 (48%), Gaps = 44/501 (8%)

Query: 185 NNFLSHLVKLNEIGRFWKLYK--EMVSCG--YVENVN-----------TFNLVIYALCKE 229
           NN  +HL++LN +     LY+    ++ G  +V+ +            + + +I+ L + 
Sbjct: 67  NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRS 126

Query: 230 CKLEEALSLYYRMLK-SGI----------------WPNVVCFNMIIN---EACQVGDLEF 269
            +L +A S   RM++ SG+                  N   F+++I    +A ++ +   
Sbjct: 127 GRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHE 186

Query: 270 ALKLFRKMG-VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
           A  L R  G  +S D+        N +I    ++G VE A  +   + ++G+  NV T  
Sbjct: 187 AFTLLRSKGFTVSIDAC-------NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +++   + G  E+      ++ ++G+ P+ V YN+ I    ++G +E A  +++ M  K
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P  +TY+ +  GLC++G  ++A ++  ++L   +  D+ +Y  L+   CK  ++   
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           +++ S M  R ++PD++ + +++  + + GN++ A+  + ++K+    P+ VIY  +I G
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419

Query: 509 LCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C+   +  A +L     + G  +D +TYNT+++G      + EA  +F+EM    +  +
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
                ILI+  CK G  Q A EL + M    I  D VTY TL+  F K    +   E+  
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           DMV   + P   +Y+ +++ L
Sbjct: 540 DMVSKEILPTPISYSILVNAL 560



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 158/298 (53%), Gaps = 5/298 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EM+  G   +V T+N +++ LCK   L EA  L+  M +  ++P+     ++I+  C
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++G+L+ A++LF+KM       +  + VT+N +++GF K+G ++ A+EI   M+   I  
Sbjct: 492 KLGNLQNAMELFQKM---KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
              +Y+ L++     G   EA R+ DEM+ + + P  ++ NS I      G+       L
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH--MVGDAYSYNILINYLC 440
             MI +   PD  +Y+ L  G  R   + +AF L  ++ EE   +V D ++YN +++  C
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           + N +  A+ +L  MI RG+ PD  TY  +I+G+    N+  A ++++ M +    P+
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 115/243 (47%), Gaps = 36/243 (14%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+    ++G  + A ++ QK+K K   + +  +N  L    K+ +I    +++ +MVS  
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD----- 266
            +    ++++++ ALC +  L EA  ++  M+   I P V+  N +I   C+ G+     
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 267 ------------------------------LEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
                                         +  A  L +KM    G  ++P+  T+N I+
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG-GLVPDVFTYNSIL 664

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +GFC+  +++ AE +   MI+ G++ +  TY  +I+G+    +  EA R+ DEM++RG  
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724

Query: 357 PNN 359
           P++
Sbjct: 725 PDD 727


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/551 (31%), Positives = 289/551 (52%), Gaps = 7/551 (1%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP---AVFDALVRA 155
            ++H LV  ++  +A  L+  ++  + VS +E ++ L+ +      +     VFD L+R 
Sbjct: 104 TLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLLIRT 163

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
             Q        +  Q L+ +G  VSI+A N  L  +VK+  +   WK+Y++ V  G + N
Sbjct: 164 YVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVN 223

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T N+++ ALCK+ KL+        M + G++ ++V +N ++N  C+ G +  A  L  
Sbjct: 224 VYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGL-- 281

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            +  M+G  + P   T+N +ING CK G  E A+ +   M+  G+  N  T+  ++    
Sbjct: 282 -VDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESC 340

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           R     EA R+ +EM++RG++P+ + ++S +      G++  AL     M    + PD  
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+IL  G CRN  V  A K+ N+++E   V D  +YN L+N LC+   L  A +L   M
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           + RG+ PD  T  TLI GYCK GN+  A+ ++E M     KP++V YN++++G CK   +
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEM 520

Query: 516 DAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           + AK L      R      I+++ LING+   G ++EAF ++ EM+  GI    V  N +
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTI 580

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I    + G   +A + +  MI  G+ PD +TY TL+  F K  + +    L ++M   G+
Sbjct: 581 IKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGL 640

Query: 635 SPDNQTYNAII 645
            P+  TYNAI+
Sbjct: 641 LPNLVTYNAIL 651



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 219/435 (50%), Gaps = 4/435 (0%)

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V  F+L+I    +  KL E    +  + K G   ++   N ++    +VG ++ A K++ 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
              V SG+ V  N  T N ++N  CK G+++        M + G+  ++ TY TL++ Y 
Sbjct: 214 DF-VKSGNIV--NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYC 270

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           R G   EA  L D M  +GL P    YN+ I+ L  EG  E A  VL +M+   +CP+  
Sbjct: 271 RRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++ +    CR   V +A ++ N++L+  +V D  S++ ++    ++  L  A      M
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              GL+PD + Y  LI+GYC+  ++ GA+++   M +     ++V YN+++NGLC+   L
Sbjct: 391 KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKML 450

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           D A  L +     G+  D  T  TLI+GY  +G + +A ++F  M    +  + V YN L
Sbjct: 451 DDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 510

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           ++  CK G  ++A+EL   MI   I P Y++++ L+  F       E   L D+M   G+
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 570

Query: 635 SPDNQTYNAIISPLL 649
            P   T N II   L
Sbjct: 571 KPTLVTCNTIIKGYL 585



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 222/456 (48%), Gaps = 39/456 (8%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    ++ LV A  + G    A+ ++  +  KG    +  +N  ++ L K     R  ++
Sbjct: 257 ADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRV 316

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             EM+  G   N  TFN ++   C++  + EA  ++  ML+ G+ P+++ F+ I+    +
Sbjct: 317 LDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSR 376

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G+L  AL  F KM    G  ++P++V +  +ING+C+   V  A ++R  M++ G   +
Sbjct: 377 NGELGRALAYFEKM---KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRG----------------------------- 354
           V TY TL++G  RG   ++A  L  EMV+RG                             
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493

Query: 355 ------LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
                 L P+ V YN+ +      G++E A  +  DMI + I P + ++SIL  G C  G
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V +AF+L +++ E+ +     + N +I    ++ NL+ A   L++MI  G+ PD ITY 
Sbjct: 554 LVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLI+ + K  N + A  +  NM++    PNLV YN+I+ G  +   +  A+ +L      
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           G+  D  TY +LINGY     + EAF +  EM   G
Sbjct: 674 GINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 167/316 (52%), Gaps = 3/316 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+    +     GA  +  ++  +G  + +  +N  L+ L +   +    +L+KEM
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   +  T   +I+  CK+  + +ALSL+  M    + P+VV +N +++  C+VG++
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEM 520

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A +L+  M       + P+ ++ + +INGFC LG V  A  +   M + GI   + T 
Sbjct: 521 EKAKELWYDM---ISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTC 577

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I GY R G+  +A    + M+  G+ P+ + YN+ I+    E + + A F++++M +
Sbjct: 578 NTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEE 637

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P+  TY+ +  G  R+G +++A  + ++++++ +  D  +Y  LIN     +N+  
Sbjct: 638 RGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKE 697

Query: 448 AKQLLSSMIVRGLIPD 463
           A ++   M+ RG +PD
Sbjct: 698 AFRVHDEMLQRGFVPD 713


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 184/610 (30%), Positives = 308/610 (50%), Gaps = 36/610 (5%)

Query: 75  KLALEFYTWVGENN--RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           +LAL+F  WV +       H         H+LV  R +++A  ++ +L S   V      
Sbjct: 26  RLALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHL-SQMGVGSKSVF 84

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             L+++Y +CK+ P+VFD L+R   + G    A +  + + ++G + S++  N  L  LV
Sbjct: 85  GALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLV 144

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  ++G  W  +KEM++     +V+TFN++I  LC E KL++A  L  +M +SG  P+VV
Sbjct: 145 KERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVV 204

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGV--------------------------------M 280
            +N ++N  C+ G  + AL+L  +MG                                 M
Sbjct: 205 TYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKM 264

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
               + PN +T+N IINGF K G++  A  I   M    +  N  TY  LIDG+   G+ 
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNF 324

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           E+AL + + M   G  PN V Y++ ++ L      E +  +L  M    +      Y+ +
Sbjct: 325 EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAM 384

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GLCRNG + ++ KL +++L++ +V D  ++++LIN  C+   +   K+++  M   GL
Sbjct: 385 IDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P+ I Y TLI  YCK G++  A +VY  M ++    N  I N +++ LCKD  +  A+ 
Sbjct: 445 APNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEY 504

Query: 521 LLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                 +IG + ++IT++ +INGY  +G   +AF+MF EM   G   +   Y  L+  LC
Sbjct: 505 FFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALC 564

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           + G +++A+ L+  +       D VTY T++    K+    + + L D+MV   V PD+ 
Sbjct: 565 RAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624

Query: 640 TYNAIISPLL 649
           TY  I + L+
Sbjct: 625 TYAIIFAGLI 634



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 261/573 (45%), Gaps = 70/573 (12%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +A    ++ LV    +   +   Y +++K++ +  S +   +N+ ++  VK  +IG   +
Sbjct: 235 EADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATR 294

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +++EM     + N  T+N +I   C +   E+AL++   M  +G  PN V ++ ++N  C
Sbjct: 295 IFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLC 354

Query: 263 QVGDLEFALKLFRKM---GVMSG-----------------------------DSVLPNSV 290
           +    E +  +  +M   G++ G                             D V+P+ V
Sbjct: 355 RHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVV 414

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR----- 345
           T + +INGFC++G+++  +EI   M KAG+  N   Y TLI  Y + G   EA +     
Sbjct: 415 TFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAM 474

Query: 346 ------------------LCDE------------MVKRGLMPNNVVYNSTIHWLFAEGDV 375
                             LC +            M K G +PN++ ++  I+     G+ 
Sbjct: 475 SRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNG 534

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  +  +MI     P HFTY  L K LCR G  K+A +L +++       D  +YN +
Sbjct: 535 LKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTI 594

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN-MKKVE 494
           +    KS  L  A  L   M+ R ++PD  TY  +  G  + G +  A+  Y N + K  
Sbjct: 595 LVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGA 654

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
             P  V+Y + ++GL +     AA    +  ++ GL  D I  N ++NGY   GK+A+A 
Sbjct: 655 VSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAG 714

Query: 554 AMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            +F+ M   + I+ +   YNIL++   K     +   L  +M+  GI PD +T  +L+  
Sbjct: 715 DIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILG 774

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           F K+   +  ++L   M+L GV+ D  T+N +I
Sbjct: 775 FCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLI 807



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 139/594 (23%), Positives = 252/594 (42%), Gaps = 82/594 (13%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD        P V  F  L+    ++G  +   ++I K+   G + +   +   + +  
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  ++   +K+Y  M   GY  N    N+++ +LCK+ K+  A   ++ M K G  PN +
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI- 311
            F+ IIN     G+   A  +F +M + +G    P+  T+  ++   C+ G+ + A+ + 
Sbjct: 520 TFDCIINGYGNSGNGLKAFSMFDEM-IKAGHH--PSHFTYGGLLKALCRAGKFKEAKRLL 576

Query: 312 -RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN----------- 359
            +   I + +D    TY T++    + G   +A+ L DEMV+R ++P++           
Sbjct: 577 DKLHYIPSAVD--TVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLI 634

Query: 360 -------------------------VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                                    V+Y + +  LF  G  + AL+   DM    +C D 
Sbjct: 635 RRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADL 694

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY-SYNILINYLCKSNNLAAAKQLLS 453
              +++  G  R G + +A  +   +     +  +  +YNIL++   K  NL+    L +
Sbjct: 695 IATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYN 754

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIE-------------------------------- 481
            M+  G+ PD +T  +LI G+CK   ++                                
Sbjct: 755 IMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETD 814

Query: 482 ---GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
               A  +   M   +  P++  ++SII+ L + +++  +  LL      G + D   Y 
Sbjct: 815 EVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYI 874

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            L+N     G I  AF +  EM  +GI+   V  + L+  L K G  ++A+ ++  M+  
Sbjct: 875 ALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRK 934

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            +IP   T+TTL+  F +N S  E ++L D M    V  D   YN +IS L  +
Sbjct: 935 SLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCAD 988



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 232/495 (46%), Gaps = 13/495 (2%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             +  L++A  + G  + A  ++ KL     +V    +N  L    K   +     L+ EM
Sbjct: 555  TYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEM 614

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMIINEACQVGD 266
            V    + +  T+ ++   L +  K+  AL  Y  +L K  + P  V +   ++   + G 
Sbjct: 615  VQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQ 674

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN--V 324
             + AL     M     + +  + +  N I+NG+ ++G++  A +I + M+ +GI  +  +
Sbjct: 675  SKAALYFCEDM---EKNGLCADLIATNVILNGYSRMGKMAKAGDI-FTMMWSGITISPSL 730

Query: 325  RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             TY  L+ GYA+  +  +   L + M++ G+ P+ +  +S I        ++  L +L  
Sbjct: 731  ATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKK 790

Query: 385  MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            M+   +  D  T+++L    C    V +AF L N +    +  D  +++ +I+ L + + 
Sbjct: 791  MLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVST 850

Query: 445  LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
            +  +  LL  M+ RG IPD   Y  L++  C+ G+I GA ++ + M+ +      V  ++
Sbjct: 851  VQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESA 910

Query: 505  IINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            ++ GL K   ++ AK +L    R  L+  I T+ TL++ +  N  + EA  +   M    
Sbjct: 911  LVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCD 970

Query: 564  IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN---CSPE 620
            + ++ + YN+LI+ LC  G    A +L K +   G+ P+  TY  L+     N    +  
Sbjct: 971  VKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKG 1030

Query: 621  EVI--ELHDDMVLSG 633
            EV+  +L +  V+SG
Sbjct: 1031 EVLLKDLQERGVISG 1045



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 28/264 (10%)

Query: 394 HFTY--SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY--LCKSNNLAAAK 449
           H T+  SI T  L R    + A  +    L +  VG    +  L+N   LCKSN      
Sbjct: 45  HLTHMLSITTHILVRARLYENAKSILKH-LSQMGVGSKSVFGALMNTYPLCKSN------ 97

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
                       P +  +  LI  Y + G +  A++ +  M      P++   N ++  L
Sbjct: 98  ------------PSV--FDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKL 143

Query: 510 CKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            K+  + A     +   ++R+   D  T+N LIN   + GK+ +A  +  +M   G   +
Sbjct: 144 VKERKVGAVWLFFKEMLARRV-CPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPS 202

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V YN ++N+ CK G Y+ A EL+  M   GI  D  TY  LV    KN    +   L  
Sbjct: 203 VVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLK 262

Query: 628 DMVLSGVSPDNQTYNAIISPLLGE 651
            M    +SP+  TYN+II+  + E
Sbjct: 263 KMRKRMISPNEITYNSIINGFVKE 286


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 202/642 (31%), Positives = 317/642 (49%), Gaps = 20/642 (3%)

Query: 28  NPSTEDIVF-RAICVNLRQRK----WKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYT 82
            PS  D  F   I   ++QR+     +IL+          +  V+   R   KL L+F+ 
Sbjct: 56  KPSVTDTDFVHHISTTIKQRRAEPFRRILKPFESKFRPDHLIWVLMSIRDDYKLVLDFFD 115

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLM------GNLMSANSVSPLEFLEGLL 136
           W     R   SLES C +V + V  +    A  L+       +L   NS     F E L+
Sbjct: 116 WA--RLRRDPSLESLCIVVQIAVASKDLRMAHRLVFEFWEKPHLDVGNSFD--RFTERLI 171

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV-KLN 195
            +Y+   A P VFD   +   + G    A  +  KL   G  VS+ + N FL+ L    +
Sbjct: 172 YTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFD 231

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
            I   +++++E    G   N  ++N++++ LC+  K++EA SL  +M   G  P+VV ++
Sbjct: 232 GIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYS 291

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           +I++  CQV  L   LKL   M  +    + PN  T+N II+  CK GRV  AE++   M
Sbjct: 292 VIVDGYCQVEQLGKVLKL---MEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVM 348

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
               I  +   Y TLI G+ + G+     +L DEM ++ ++P+ V Y S IH L   G V
Sbjct: 349 KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKV 408

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  + S+M+ K + PD  TY+ L  G C+ G +K+AF LHNQ++E+ +  +  +Y  L
Sbjct: 409 VEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTAL 468

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           ++ LCK   +  A +LL  M  +GL P++ TY  LI+G CK GNIE AV++ E M     
Sbjct: 469 VDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF 528

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFA 554
            P+ + Y +I++  CK   +  A  LL+     GL   I T+N L+NG+ ++G + +   
Sbjct: 529 FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER 588

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +   M + GI  N   +N L+   C     +   E+ K M   G++PD  TY  L+    
Sbjct: 589 LIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHC 648

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           K  + +E   LH +MV  G S    +YN++I      K  E+
Sbjct: 649 KARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEE 690



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 203/391 (51%), Gaps = 7/391 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     +++++    + G    A  V++ +K +        +   +S   K   +   +K
Sbjct: 319 KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYK 378

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EM     V +  T+  +I+ LC+  K+ EA  L+  ML  G+ P+ V +  +I+  C
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+++ A  L  +M V  G  + PN VT+  +++G CK G V+ A E+ + M + G+  
Sbjct: 439 KAGEMKEAFSLHNQM-VEKG--LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY  LI+G  + G+ E+A++L +EM   G  P+ + Y + +      G++  A  +L
Sbjct: 496 NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+DK + P   T+++L  G C +G ++   +L   +L++ ++ +A ++N L+   C  
Sbjct: 556 RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIR 615

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI- 501
           NN+ A  ++   M  +G++PD  TY  LI G+CK  N++ A  +++ M  VEK  +L   
Sbjct: 616 NNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEM--VEKGFSLTAA 673

Query: 502 -YNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            YNS+I G  K    + A+ L +  +  G +
Sbjct: 674 SYNSLIKGFYKRKKFEEARKLFEEMRTHGFI 704



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 191/392 (48%), Gaps = 11/392 (2%)

Query: 100 IVHLLVNWRRFDDALL---LMGNLMSANSVSPLEFLEGLLDSYEICKATP--AVFDALVR 154
           ++ ++ N R F D ++   L+     + +VS +E+   L D  +  K  P    + +++ 
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLISGFGKSGNVS-VEY--KLFDEMKRKKIVPDFVTYTSMIH 400

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
              Q G    A  +  ++  KG       +   +    K  E+   + L+ +MV  G   
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV T+  ++  LCK  +++ A  L + M + G+ PNV  +N +IN  C+VG++E A+KL 
Sbjct: 461 NVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLM 520

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M +       P+++T+  I++ +CK+G +  A E+   M+  G+   + T+  L++G+
Sbjct: 521 EEMDLAG---FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
              G  E+  RL   M+ +G+MPN   +NS +       ++   + +   M  + + PD 
Sbjct: 578 CMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDT 637

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+IL KG C+   +K+A+ LH +++E+     A SYN LI    K      A++L   
Sbjct: 638 NTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEE 697

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
           M   G I +   Y   +D   + GN E  +++
Sbjct: 698 MRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 186/625 (29%), Positives = 322/625 (51%), Gaps = 23/625 (3%)

Query: 51   LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
            LE+    LT ++V +V+   R     AL F+ W      ++H   +   ++  L+  +R 
Sbjct: 802  LERFTGKLTTTVVGKVLQGVRNG-DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRP 860

Query: 111  DDALLLMGNLM--SANSVSPLEFLEGLL------DSYEICKATPA--------VFDALVR 154
             DAL +  N +  S N  +    + GL        +YE+ K  P         + + +++
Sbjct: 861  KDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIK 920

Query: 155  ACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                    + A ++ ++++  G     +  ++  +  LVK  ++    +L ++MVS G  
Sbjct: 921  GLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCS 980

Query: 214  ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
             NV T++ +++ LCK  KL+EA +L  RM +SG  PN+V +N II+  C++G ++ A  L
Sbjct: 981  PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 1040

Query: 274  FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
              +M V  G    PN VT+  +++ FCK G+ E A  +   M++ G   N+ TY +L+D 
Sbjct: 1041 LEEM-VDGG--CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 1097

Query: 334  YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
            + +    E A +L   M+++G +PN V YN+ I  L     V   + +L  M+  +  PD
Sbjct: 1098 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157

Query: 394  HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              T++ +   +C+   V  A++L N + E     +  +YN L++ LCKS     A+ LL 
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 1217

Query: 454  SMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M  + G  PDIITY T+IDG CK   ++ A +++  M      P+ V Y+ +I+ LCK 
Sbjct: 1218 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 1277

Query: 513  ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
              +D A ++L+   + G    AITY TLI+G+   G + +A  +   + + G   + V +
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 1337

Query: 572  NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
            +I I++L K G  +QA EL++ M+  G++PD VTY TL+  F      E+ ++L + M  
Sbjct: 1338 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397

Query: 632  SGVSPDNQTYNAIISPLLGEKSAED 656
             G  PDN TY  ++  L+ +KS +D
Sbjct: 1398 CGCEPDNATYTTLVGHLVDKKSYKD 1422



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 177/632 (28%), Positives = 293/632 (46%), Gaps = 62/632 (9%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           Q++P +   ++ R++      P  AL F+ W    + + H +     ++++LV   ++  
Sbjct: 90  QLSPEIVGKVLQRLID-----PGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQ 144

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           A  L  +            +EG      +  +T  +    +RA    G    AY++  ++
Sbjct: 145 AHDLFRSR-----------IEGQWGGDTVTYST--LISGFIRA----GKILPAYELFDEM 187

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
             KG         + L  L    +       ++EM      ++V T+N +I  L K  +L
Sbjct: 188 NRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYNTMINGLSKSDRL 246

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           ++A+ L   M+ +G  PNV  +N +++  C+   +E AL L  +M V  G    P+ V++
Sbjct: 247 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM-VTRG--CPPDVVSY 303

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             +ING CKL +V+ A  +   MI+ G   NV TY TL+DG+ R G  + A+ L  +M +
Sbjct: 304 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 363

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG  PN + YN+ +H      D+E A  VL  MI     PD   YS +  G C+ G +++
Sbjct: 364 RGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLRE 423

Query: 413 AFKLHNQVLEE-----------------------------------HMVGDAYSYNILIN 437
           A  L  Q++                                         D  +Y+ILI+
Sbjct: 424 AHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIH 483

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LCK+  L  A+  L  M+     PD++TY +++DG CK   I  A  +++ M+     P
Sbjct: 484 ALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMP 543

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           ++V Y+ +I+  CKD +LD+A  +L+  +    + D +TY+ LING    G + +AF +F
Sbjct: 544 DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVF 603

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM   G A N V YN LI+ LCK    +QA E++++M      PD +TYT L+      
Sbjct: 604 QEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNA 663

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              EE   +  +M   G  PD  TY  ++  L
Sbjct: 664 SRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 246/503 (48%), Gaps = 34/503 (6%)

Query: 131  FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
             LE ++D    C+     +  L+ A  + G  E A  +++ +  KG+  ++  +N+ L  
Sbjct: 1040 LLEEMVDGG--CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 1097

Query: 191  LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
              K +E+ R  +L   M+  G V NV ++N VI  LCK  K+ E + L  +ML +   P+
Sbjct: 1098 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157

Query: 251  VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
            +V FN II+  C+   ++ A +LF    ++      PN VT+N +++G CK  R + AE 
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELF---NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 1214

Query: 311  IRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +   M  K G   ++ TY T+IDG  +    + A +L  +M+  GL P++V Y+  I  L
Sbjct: 1215 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 1274

Query: 370  FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
                 ++ A  VL  M+     P   TY  L  G C+ G + +A ++   +L +    D 
Sbjct: 1275 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 1334

Query: 430  YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             +++I I++L K   L  A +LL +M+  GL+PD +TY TL+ G+C     E AV ++E 
Sbjct: 1335 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEV 1394

Query: 490  MKKVEKKPNLVIYNSIINGLC-----KDASLDAAKSL--------------LQASQRIGL 530
            M++   +P+   Y +++  L      KD   + +KS+              L+AS  +  
Sbjct: 1395 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVE- 1453

Query: 531  LDAITYNTLINGYFINGKIAEAFAMFSEM--RNVGIAVNKVGYNILINFLCKFGCYQQAR 588
             D      +++ +   G   +A  +F  M  RNV      V ++ ++         +QA 
Sbjct: 1454 ADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNV------VLWSAMLGVYVFHKQEEQAF 1507

Query: 589  ELMKVMILHGIIPDYVTYTTLVT 611
             L +VM L G+ PD VT+ +L+T
Sbjct: 1508 GLWRVMGLEGVEPDAVTFLSLLT 1530



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 221/455 (48%), Gaps = 21/455 (4%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEI- 141
           +N F+ ++ S   ++H      R ++AL L+  +++     + VS    + GL    ++ 
Sbjct: 258 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVD 317

Query: 142 -------------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
                        C+     +  LV    ++G  +GA ++++K+  +G+  +   +NN +
Sbjct: 318 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 377

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               + N++ R  ++ + M+  G   +   ++ +I   CK  KL EA  L  +M++ G  
Sbjct: 378 HVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR 437

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V C + +I+  C+   ++ A +L R M +  G    P+ V ++ +I+  CK  R+  A
Sbjct: 438 PDVACLSTLIDALCKAAAIDSAQELLR-MSI--GMDCAPDVVAYSILIHALCKAKRLPEA 494

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           E     M+K     +V TY +++DG  +     +A  L D M   G+MP+ V Y+  IH 
Sbjct: 495 ESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHS 554

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
              + +++ A  +L  M +    PD  TYS L  GLC+ G V +AF +  ++L      +
Sbjct: 555 FCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPN 614

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +YN LI+ LCK N +  A ++L  M  +   PD ITY  LI+G C    +E A +V  
Sbjct: 615 LVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLR 674

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
            MK     P+ + Y +++  L K  +L+  + LL+
Sbjct: 675 EMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLK 709



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 136/595 (22%), Positives = 252/595 (42%), Gaps = 71/595 (11%)

Query: 99   AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
            ++V  L   RR +DA LL  + M A  V P                    +  ++ +  +
Sbjct: 515  SVVDGLCKSRRINDAFLLF-DRMRAAGVMP----------------DVVTYSIVIHSFCK 557

Query: 159  IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
                + A+ +++++K       +  ++  ++ L K   + + + +++EM+ CG   N+ T
Sbjct: 558  DNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVT 617

Query: 219  FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            +N +I  LCK  K+E+A  +   M K    P+ + +  +IN  C    LE A ++ R+M 
Sbjct: 618  YNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREM- 676

Query: 279  VMSGDSVLPNSVTHNCIINGFCK----------LGRVEFAEEIRYA---------MIKAG 319
                   LP+ +T+  ++    K          L  +E  EE ++          +I+  
Sbjct: 677  --KDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRGD 734

Query: 320  I--------DCNVRTYATLIDGYARGGS---SEEALRLCDEMVKRGLMPNNV-VYNSTIH 367
            +           + +   ++D   + G         R+     + G     V + NS   
Sbjct: 735  VLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHKIVRILNSRFA 794

Query: 368  WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL--CRNGCVKQAFKLHNQVLEEHM 425
            W +AE  +E     L             T +++ K L   RNG     F       +E  
Sbjct: 795  WEYAETALERFTGKL-------------TTTVVGKVLQGVRNGDAALGF-FDWATSQEGY 840

Query: 426  VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
              D Y+ N L+  L +      A Q+  + +     P++ T+  LI G C+ G+I  A +
Sbjct: 841  NHDTYTCNCLLQALLRLKRPKDALQVYRNKLC--CSPNMFTFTILIHGLCRAGDIGTAYE 898

Query: 486  VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGY 543
            + + M +     N++++N +I GLC    LD+A  L +  +  G    D  TY+T+++  
Sbjct: 899  LLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSL 958

Query: 544  FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              +GK+ +A  +  +M + G + N V Y+ L++ LCK G   +A  L++ M   G  P+ 
Sbjct: 959  VKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 1018

Query: 604  VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            VTY T++    K    +E   L ++MV  G  P+  TY  ++        AED +
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 1073



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 114/501 (22%), Positives = 220/501 (43%), Gaps = 64/501 (12%)

Query: 99   AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDS----------YEI------- 141
             ++  L    +  + +LL+  ++S N V  +     ++D+          YE+       
Sbjct: 1128 TVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 1187

Query: 142  -CKATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
             C      +++LV   C      +  Y + +  + +G S  I  +N  +  L K   + R
Sbjct: 1188 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 1247

Query: 200  FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             +KL+ +M+S G   +  T+++VI +LCK   ++EA ++   MLK+G  P  + +  +I+
Sbjct: 1248 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 1307

Query: 260  EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              C+ G+L+ AL++ +   ++      P+ VT +  I+   K GR+  A E+   M++AG
Sbjct: 1308 GFCKTGNLDKALEILQ---LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 1364

Query: 320  IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            +  +  TY TL+ G+     +E+A+ L + M + G  P+N  Y + +  L  +   +  L
Sbjct: 1365 LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLL 1424

Query: 380  FVLS-DMIDK-----HICPDHFTYSILTKGLCRNGC-----------------VKQAFKL 416
              +S  M+D      H        SI  +   R GC                 V +    
Sbjct: 1425 AEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQ 1484

Query: 417  HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             N VL   M+G  Y ++              A  L   M + G+ PD +T+ +L+   C 
Sbjct: 1485 RNVVLWSAMLG-VYVFH---------KQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCH 1534

Query: 477  GGNIEGAVQVYENMKK-VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL---LD 532
             G ++ AV  + ++ +    +P +  ++ +I+ L +   ++ A+ L+     +G+     
Sbjct: 1535 AGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLM-----LGMPCKPS 1589

Query: 533  AITYNTLINGYFINGKIAEAF 553
            A T+N L++ Y I G    A 
Sbjct: 1590 AATWNCLLSAYKICGDFERAL 1610


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 174/547 (31%), Positives = 285/547 (52%), Gaps = 12/547 (2%)

Query: 68  SEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS 127
           S+F  S  L L+F  W      FS   +  C  +H+L  ++ +  A  L   ++  N+V 
Sbjct: 57  SQFDSS--LVLKFLDWARSQQFFS--FQCKCLALHILTRYKLYKTAQSLAEEVV-VNTVD 111

Query: 128 PL--EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
               +  + L +SY  CK++ AVFD +V++C ++     A  ++   K  G    + ++N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 186 NFLSHLVKLNEIGRFWK-LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
             L  +++  +  +  + ++KEMV  G   NV T+N++I   C    LE  L  +  M +
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER 231

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           +G  PNVV +N II+  C++  +  A KL R M +     + PN +++N +ING C+ G+
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL---KGLNPNLISYNVVINGLCREGQ 288

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++   EI   M K     +  T+ TLI+GY   G+  +AL L  EMVK GL PN V Y +
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I+ +   G++  A+  L  M D+ + P+  TY+ L  G  + G +KQA+++  +++E  
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
                 +YN LIN  C    +  A  LL  MI RG IPD+++Y T+I G+C+   +E A 
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           Q+   M      P++  Y+S+I GLCK   L     L Q    +GL  D +TY +LIN Y
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
            I G + +A  +  EM   G + + V YN+LIN   K    ++A+ L+  ++    +P+ 
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588

Query: 604 VTYTTLV 610
           +TY TL+
Sbjct: 589 ITYNTLI 595



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 165/557 (29%), Positives = 264/557 (47%), Gaps = 56/557 (10%)

Query: 133 EGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           EG+         +P V+  + L+R     G  E       +++  G   ++  +N  +  
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
             KL +IG  +KL + M   G   N+ ++N+VI  LC+E +++E   +   M K    P+
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
            V FN +IN  C VG+   AL L  +M V +G S  PN VT+  +IN  CK G +  A E
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEM-VKNGLS--PNVVTYTTLINSMCKAGNLNRAME 364

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
               M   G+  N RTY TLIDG+++ G  ++A ++  EMV+ G  P  + YN+ I+   
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHC 424

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +E A  +L +MI++   PD  +YS +  G CRN  +++AF+L  +++ + +  D  
Sbjct: 425 ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y+ LI  LCK   L     L   M+  GL PD +TY +LI+ YC  G+++ A+++++ M
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEM 544

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLIN-------- 541
            +    P++V YN +ING  K +    AK LL +      + + ITYNTLI+        
Sbjct: 545 IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFK 604

Query: 542 -------GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
                  G+ + G + EA  +   M   G  +N+  YN++I+   K G  ++A  L K M
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664

Query: 595 ILHGIIPDYVTYTTLVTRF-----------------------------------SKNCSP 619
           +  G  P  VT   L                                       SK  + 
Sbjct: 665 LHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNM 724

Query: 620 EEVIELHDDMVLSGVSP 636
           + V  +  DM LSG+ P
Sbjct: 725 DAVFNVLKDMALSGLLP 741



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 230/430 (53%), Gaps = 5/430 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD-LEFALKLFRKM 277
           F+LV+ +  +   + +ALS+       G  P V+ +N I++   +    ++ A  +F++M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            V SG  V PN  T+N +I GFC  G +E        M + G   NV TY T+ID Y + 
Sbjct: 195 -VESG--VSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
               EA +L   M  +GL PN + YN  I+ L  EG ++    +L +M  +   PD  T+
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G C  G   QA  LH ++++  +  +  +Y  LIN +CK+ NL  A + L  M  
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RGL P+  TY TLIDG+ + G ++ A Q+ + M +    P ++ YN++ING C    ++ 
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  LLQ     G + D ++Y+T+I+G+  N ++ +AF +  EM   GI+ +   Y+ LI 
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK     +  +L + M+  G+ PD VTYT+L+  +      ++ + LHD+M+  G SP
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 637 DNQTYNAIIS 646
           D  TYN +I+
Sbjct: 552 DIVTYNVLIN 561



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 174/336 (51%), Gaps = 2/336 (0%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEE-ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           G    V +Y  ++D   R   S + A  +  EMV+ G+ PN   YN  I      G++E 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
            L    +M      P+  TY+ +    C+   + +AFKL   +  + +  +  SYN++IN
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+   +    ++L  M  R  +PD +T+ TLI+GYC  GN   A+ ++  M K    P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           N+V Y ++IN +CK  +L+ A   L   +  GL  +  TY TLI+G+   G + +A+ + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM   G     + YN LIN  C  G  + A  L++ MI  G IPD V+Y+T+++ F +N
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
              E+  +L  +MV  G+SPD  TY+++I  L  ++
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 174/547 (31%), Positives = 285/547 (52%), Gaps = 12/547 (2%)

Query: 68  SEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS 127
           S+F  S  L L+F  W      FS   +  C  +H+L  ++ +  A  L   ++  N+V 
Sbjct: 57  SQFDSS--LVLKFLDWARSQQFFS--FQCKCLALHILTRYKLYKTAQSLAEEVV-VNTVD 111

Query: 128 PL--EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
               +  + L +SY  CK++ AVFD +V++C ++     A  ++   K  G    + ++N
Sbjct: 112 ETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYN 171

Query: 186 NFLSHLVKLNEIGRFWK-LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
             L  +++  +  +  + ++KEMV  G   NV T+N++I   C    LE  L  +  M +
Sbjct: 172 AILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER 231

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           +G  PNVV +N II+  C++  +  A KL R M +     + PN +++N +ING C+ G+
Sbjct: 232 NGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL---KGLNPNLISYNVVINGLCREGQ 288

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++   EI   M K     +  T+ TLI+GY   G+  +AL L  EMVK GL PN V Y +
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I+ +   G++  A+  L  M D+ + P+  TY+ L  G  + G +KQA+++  +++E  
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
                 +YN LIN  C    +  A  LL  MI RG IPD+++Y T+I G+C+   +E A 
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           Q+   M      P++  Y+S+I GLCK   L     L Q    +GL  D +TY +LIN Y
Sbjct: 469 QLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAY 528

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
            I G + +A  +  EM   G + + V YN+LIN   K    ++A+ L+  ++    +P+ 
Sbjct: 529 CIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNE 588

Query: 604 VTYTTLV 610
           +TY TL+
Sbjct: 589 ITYNTLI 595



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 165/557 (29%), Positives = 264/557 (47%), Gaps = 56/557 (10%)

Query: 133 EGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           EG+         +P V+  + L+R     G  E       +++  G   ++  +N  +  
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDA 247

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
             KL +IG  +KL + M   G   N+ ++N+VI  LC+E +++E   +   M K    P+
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
            V FN +IN  C VG+   AL L  +M V +G S  PN VT+  +IN  CK G +  A E
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEM-VKNGLS--PNVVTYTTLINSMCKAGNLNRAME 364

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
               M   G+  N RTY TLIDG+++ G  ++A ++  EMV+ G  P  + YN+ I+   
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHC 424

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +E A  +L +MI++   PD  +YS +  G CRN  +++AF+L  +++ + +  D  
Sbjct: 425 ILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVA 484

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y+ LI  LCK   L     L   M+  GL PD +TY +LI+ YC  G+++ A+++++ M
Sbjct: 485 TYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEM 544

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLIN-------- 541
            +    P++V YN +ING  K +    AK LL +      + + ITYNTLI+        
Sbjct: 545 IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFK 604

Query: 542 -------GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
                  G+ + G + EA  +   M   G  +N+  YN++I+   K G  ++A  L K M
Sbjct: 605 SALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEM 664

Query: 595 ILHGIIPDYVTYTTLVTRF-----------------------------------SKNCSP 619
           +  G  P  VT   L                                       SK  + 
Sbjct: 665 LHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNM 724

Query: 620 EEVIELHDDMVLSGVSP 636
           + V  +  DM LSG+ P
Sbjct: 725 DAVFNVLKDMALSGLLP 741



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 230/430 (53%), Gaps = 5/430 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD-LEFALKLFRKM 277
           F+LV+ +  +   + +ALS+       G  P V+ +N I++   +    ++ A  +F++M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            V SG  V PN  T+N +I GFC  G +E        M + G   NV TY T+ID Y + 
Sbjct: 195 -VESG--VSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKL 251

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
               EA +L   M  +GL PN + YN  I+ L  EG ++    +L +M  +   PD  T+
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G C  G   QA  LH ++++  +  +  +Y  LIN +CK+ NL  A + L  M  
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RGL P+  TY TLIDG+ + G ++ A Q+ + M +    P ++ YN++ING C    ++ 
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  LLQ     G + D ++Y+T+I+G+  N ++ +AF +  EM   GI+ +   Y+ LI 
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK     +  +L + M+  G+ PD VTYT+L+  +      ++ + LHD+M+  G SP
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551

Query: 637 DNQTYNAIIS 646
           D  TYN +I+
Sbjct: 552 DIVTYNVLIN 561



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 175/336 (52%), Gaps = 2/336 (0%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEE-ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           G    V +Y  ++D   R   S + A  +  EMV+ G+ PN   YN  I      G++E 
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
            LF   +M      P+  TY+ +    C+   + +AFKL   +  + +  +  SYN++IN
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN 281

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+   +    ++L  M  R  +PD +T+ TLI+GYC  GN   A+ ++  M K    P
Sbjct: 282 GLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           N+V Y ++IN +CK  +L+ A   L   +  GL  +  TY TLI+G+   G + +A+ + 
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM   G     + YN LIN  C  G  + A  L++ MI  G IPD V+Y+T+++ F +N
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
              E+  +L  +MV  G+SPD  TY+++I  L  ++
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQR 497


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/615 (29%), Positives = 317/615 (51%), Gaps = 44/615 (7%)

Query: 76  LALEFYTWV-----GENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           LAL+F  WV      E N  +H L  +    H+LV  R +  A  ++ +L   NS S   
Sbjct: 34  LALKFLKWVIKQPGLEPNHLTHILGIT---THVLVRARLYGYAKSILKHLAQKNSGS--N 88

Query: 131 FLEG-LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           FL G L+D+Y +C + PAVFD L+R   + G    A +    + ++G   S++  N  ++
Sbjct: 89  FLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMA 148

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            +VK       W  +K+M++     NV++FN++I  LC + KL++A+++   M ++G  P
Sbjct: 149 SMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVP 208

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKM---GV--------------------------- 279
            +V +N +++  C+ G  +FAL L   M   G+                           
Sbjct: 209 TIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVL 268

Query: 280 --MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    + PN V++N +INGF K G++  A  +   MI+  +  N+ TY  LI+GY   
Sbjct: 269 KKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCIN 328

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G+ EEALRL D M    + PN V   + ++ L+     + A  +L          +  ++
Sbjct: 329 GNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISH 388

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +++  GLCRNG + +AF+L  ++ ++ +  D  ++++LIN  CK  NL  AK+++S +  
Sbjct: 389 TVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYR 448

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G +P+ + + TLI   CK GN+   ++ Y  M    +  +    NS++  LC++  L  
Sbjct: 449 EGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVE 508

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+  L    RIGL+ +++T++ +INGY   G  + AF++F +M + G   +   Y  L+ 
Sbjct: 509 AEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLK 568

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK   + +AR+L+K +    +  D ++Y TL+   SK+ +  E + L ++M+ + + P
Sbjct: 569 VLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILP 628

Query: 637 DNQTYNAIISPLLGE 651
           D+ TY  I+S L+ E
Sbjct: 629 DSYTYTCILSGLIRE 643



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 144/645 (22%), Positives = 304/645 (47%), Gaps = 43/645 (6%)

Query: 27  ANPSTEDIVFRAICVNLRQRK-WKILEQMAPSLTNS---LVNRVVSEFRKSPKLALEFYT 82
           A+  T ++   ++C N R  + + +L++M   +        N +++ F K  K+ +    
Sbjct: 243 ADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRV 302

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWR----RFDDALLLMGNLMSANSVSPLE-----FLE 133
           +   N     +L  +    ++L+N       F++AL L+ ++M AN V P E      L 
Sbjct: 303 F---NEMIELNLSPNLITYNILINGYCINGNFEEALRLL-DVMEANDVRPNEVTIGTLLN 358

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
           GL  S        A FD              A +++++  +   S++  +    +  L +
Sbjct: 359 GLYKS--------AKFDV-------------ARNILERYSINRTSLNCISHTVMIDGLCR 397

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
              +   ++L  EM   G   ++ TF+++I   CK   L +A  +  ++ + G  PN V 
Sbjct: 398 NGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVI 457

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F+ +I  +C+VG++   +K +  M +   ++   ++ T N ++   C+ G++  AEE  +
Sbjct: 458 FSTLIYNSCKVGNVYEGMKFYAAMNLNGQNA---DNFTCNSLVASLCENGKLVEAEEFLH 514

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            + + G+  N  T+  +I+GYA  G    A  + D+M+  G  P+   Y S +  L    
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQ 574

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           +   A  +L  +    +  D  +Y+ L   + ++G + +A +L  ++++ +++ D+Y+Y 
Sbjct: 575 NFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYT 634

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIP-DIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            +++ L +   L  A   L  ++ + ++  + I Y   IDG  K G  + A+ +++ M++
Sbjct: 635 CILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEE 694

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
                +L+  NSI +G  +   + +A SL+  ++   ++ +  T+N L++GY     I  
Sbjct: 695 KGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMS 754

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
            F +++ MR  G   N++ Y+ LI  LC  G  +   +++K+ I      D +T+  L+ 
Sbjct: 755 CFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIR 814

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  +    ++VI+L  +M +  VS D  T  A+   L+    +++
Sbjct: 815 KCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQN 859



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 117/527 (22%), Positives = 223/527 (42%), Gaps = 42/527 (7%)

Query: 147  AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
              FD ++     +G   GA+ V  K+   GH  S   + + L  L K        KL K+
Sbjct: 526  VTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 207  MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            +       +  ++N +I  + K   L EA+ L+  M+++ I P+   +  I++   + G 
Sbjct: 586  LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            L  A     ++  M  + +  NS+ + C I+G  K G+ + A  +   M + G+  ++  
Sbjct: 646  LVCAFIFLGRL--MQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIA 703

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
              ++ DGY+R G    A  L  +   + ++PN   +N  +H      D+     + + M 
Sbjct: 704  LNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMR 763

Query: 387  DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                 P+  TY  L  GLC +G ++   K+    + E    D  ++N+LI   C+ N+L 
Sbjct: 764  RSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823

Query: 447  AAKQL-----------------------------------LSSMIVRGLIPDIITYGTLI 471
                L                                   +  M+ +G IP    Y T++
Sbjct: 824  KVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMM 883

Query: 472  DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
               C+ G+I+GA ++ + M  +    +     +++ GL     ++ A  +LQ   R+  +
Sbjct: 884  KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943

Query: 532  DAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
                T+ TL++ +       EA  +   M +  + ++ V YN+LI+  C  G    A + 
Sbjct: 944  PTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDF 1003

Query: 591  MKVMILHGIIPDYVTYTTLVTRFSKN--CSPEEVI--ELHDDMVLSG 633
             + +   G++P+  TY  LV+  S     S  E++  +L+D  ++SG
Sbjct: 1004 YEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSG 1050



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 83/198 (41%), Gaps = 13/198 (6%)

Query: 145  TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
            T   +  +++   ++G  +GA+ +  ++   G S+   A    +  L    +I     + 
Sbjct: 875  TSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWIL 934

Query: 205  KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            + M+    +   +TF  +++  CK+   +EA +L   M    +  ++V +N++I+  C  
Sbjct: 935  QRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCAN 994

Query: 265  GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
            GD+  AL  + +   +    +LPN  T+  +++       V   E +   +   G     
Sbjct: 995  GDVITALDFYEE---IKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRG----- 1046

Query: 325  RTYATLIDGYARGGSSEE 342
                 L+ GY  G S + 
Sbjct: 1047 -----LVSGYLDGKSQKS 1059


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 312/625 (49%), Gaps = 15/625 (2%)

Query: 39  ICVNLRQRK----WKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSL 94
           I + ++QR+     ++L+          +  V+   +   +L L F+ W     R   SL
Sbjct: 69  ISIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACL--RRDPSL 126

Query: 95  ESSCAIVHLLVNWRRFDDALLLMGNL-MSAN---SVSPLEFLEGLLDSYEICKATPAVFD 150
           E+ C +  +    +    A  L+ +  ++ N    VS   F+E L+ +Y+   + P VFD
Sbjct: 127 EARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTYKDWGSDPRVFD 186

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK-LNEIGRFWKLYKEMVS 209
              +   + G  + A  +  K+   G  +S+ + N F+SHL + L+ I    K++ E   
Sbjct: 187 IFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPE 246

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   N  ++N++ ++LC+  ++ EA  L  +M   G  P+V+ ++ +IN  CQVG+L+ 
Sbjct: 247 VGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQR 306

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
            LKL  +M +     + PN  T+N +I   CK G+V  AE +   MI  GI  +   Y T
Sbjct: 307 VLKLIEEMQI---KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDG+ + G+   A RL DEM KR + P+ + Y + I  L   G V  A  +  +M+ K 
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  TY+ L  G C+ G +K+AF LHNQ+L+  +  +  +Y  L + LCK   +  A 
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +LL  M  +GL  +I TY +L++G CK GNI+ AV++ ++M+     P+ V Y ++++  
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543

Query: 510 CKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   +  A  LL Q   R      +T+N L+NG+ ++G + +   +   M   GI  N 
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             YN LI   C     +   E+ + M   G++PD  TY  L+    K  + +E   LH D
Sbjct: 604 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 663

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKS 653
           MV  G +    +YNA+I      K 
Sbjct: 664 MVGKGFNLTVSSYNALIKGFYKRKK 688



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 263/552 (47%), Gaps = 46/552 (8%)

Query: 103 LLVNWRRFDDALLLMGNLMSANS----VSPL-EFLEGLLDSYEICKATPAV--------F 149
           +L   R+  D +L  G L+S +S    +S L E L+G+  + ++    P V        +
Sbjct: 197 MLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASY 256

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           + +  +  Q+G    A+ ++ +++++G    + +++  ++   ++ E+ R  KL +EM  
Sbjct: 257 NIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQI 316

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   N  T+N VI  LCK  K+ EA  +   M+  GI P+ V +  +I+  C++G++  
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376

Query: 270 ALKLFRKMG-----------------------VMSGDSVL---------PNSVTHNCIIN 297
           A +LF +M                        VM  D +          P+ VT+  +I+
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G+CK G+++ A  +   M++ G+  N+ TY  L DG  + G  + A  L  EM ++GL  
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N   YNS ++ L   G+++ A+ ++ DM      PD  TY+ L    C++  + +A +L 
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            Q+L+  +     ++N+L+N  C S  L   ++LL  M+ +G++P+  TY +LI  YC  
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
            N+    ++Y  M      P+   YN +I G CK  ++  A  L +     G  L   +Y
Sbjct: 617 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 676

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N LI G++   K  EA  +F +MR  G+  ++  YNI  +     G  +   EL    I 
Sbjct: 677 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIE 736

Query: 597 HGIIPDYVTYTT 608
             ++ D  T  T
Sbjct: 737 KCLVGDIQTKNT 748



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 213/440 (48%), Gaps = 40/440 (9%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD-LEFALKLFRKM 277
           F++    L +   L+EA  L+ +ML  G+  +V   N+ I+   +  D ++ ALK+F + 
Sbjct: 185 FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEF 244

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             +    V  N+ ++N I +  C+LGRV                                
Sbjct: 245 PEVG---VCWNTASYNIITHSLCQLGRVV------------------------------- 270

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
               EA +L  +M  RG +P+ + Y++ I+     G+++  L ++ +M  K + P+ +TY
Sbjct: 271 ----EAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTY 326

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + +   LC+ G V +A ++  +++ E +  D   Y  LI+  CK  N+++A +L   M  
Sbjct: 327 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 386

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           R + PD ITY  +I G C+ G +  A +++  M     +P+ V Y ++I+G CK+  +  
Sbjct: 387 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 446

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A SL     ++GL  + +TY  L +G    G++  A  +  EM   G+ +N   YN L+N
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK G   QA +LMK M + G  PD VTYTTL+  + K+       EL   M+   + P
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566

Query: 637 DNQTYNAIISPLLGEKSAED 656
              T+N +++        ED
Sbjct: 567 TVVTFNVLMNGFCMSGMLED 586


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 180/615 (29%), Positives = 317/615 (51%), Gaps = 44/615 (7%)

Query: 76  LALEFYTWV-----GENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           LAL+F  WV      E N  +H L  +    H+LV  R +  A  ++ +L   NS S   
Sbjct: 34  LALKFLKWVIKQPGLEPNHLTHILGIT---THVLVKARLYGYAKSILKHLAQKNSGS--N 88

Query: 131 FLEG-LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           FL G L+D+Y +C + PAVFD L+R   + G    A +    + ++G   S++  N  ++
Sbjct: 89  FLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMA 148

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            +VK       W  +K+M++     NV++FN++I  LC + KL++A+++   M ++G  P
Sbjct: 149 SMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVP 208

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKM---GV--------------------------- 279
            +V +N +++  C+ G  +FAL L   M   G+                           
Sbjct: 209 TIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVL 268

Query: 280 --MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    + PN V++N +INGF K G++  A  +   MI+  +  N+ TY  LI+GY   
Sbjct: 269 KKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCIN 328

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G+ EEALR+ D M    + PN V   + ++ L+     + A  +L          +  ++
Sbjct: 329 GNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISH 388

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +++  GLCRNG + +AF+L  ++ ++ +  D  ++++LIN  CK  N+  AK+++S +  
Sbjct: 389 TVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYR 448

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G +P+ + + TLI   CK GN+  A++ Y  M    +  +    NS++  LC++  L  
Sbjct: 449 EGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVE 508

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+  L    RIGL+ +++T++ +INGY   G  + AF++F  M + G   +   Y  L+ 
Sbjct: 509 AEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLK 568

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK   + +AR+L+K +    +  D ++Y TL+   SK+ +  E + L ++M+ + + P
Sbjct: 569 VLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILP 628

Query: 637 DNQTYNAIISPLLGE 651
           D+ TY  I+S L+ E
Sbjct: 629 DSYTYTCILSGLIRE 643



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 220/479 (45%), Gaps = 40/479 (8%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  +  ++I  LC+   L+EA  L   M K G+ P+++ F+++IN  C+VG++  A ++ 
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVM 443

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            K+     +  +PN+V  + +I   CK+G V  A +   AM   G + +  T  +L+   
Sbjct: 444 SKI---YREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASL 500

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
              G   EA      + + GL+PN+V ++  I+     GD  GA  V   MI     P  
Sbjct: 501 CENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSP 560

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           FTY  L K LC+     +A KL  ++    +  D  SYN LI  + KS NL  A +L   
Sbjct: 561 FTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEE 620

Query: 455 MIVRGLIPDIITYGTL------------------------------------IDGYCKGG 478
           MI   ++PD  TY  +                                    IDG  K G
Sbjct: 621 MIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAG 680

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
             + A+ +++ M++     +L+  NSI +G  +   + +A SL+  ++   ++ +  T+N
Sbjct: 681 QSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFN 740

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            L++GY     I   F +++ MR  G   N++ Y+ LI  LC  G  +   +++K+ I  
Sbjct: 741 ILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAE 800

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               D +T+  L+ +  +    ++VI+L  +M +  VS D  T  A+   L+    +++
Sbjct: 801 SSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQN 859



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 252/579 (43%), Gaps = 78/579 (13%)

Query: 142 CKATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           CK   A    ++  + +  +   +   Y V++K++ K  + +  ++N  ++  VK  +IG
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV------ 252
              +++ EM+      N+ T+N++I   C     EEAL +   M  + + PN V      
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLL 357

Query: 253 -------------------CFN----------MIINEACQVGDLEFALKLFRKMGVMSGD 283
                              C N          ++I+  C+ G L+ A +L  +M     D
Sbjct: 358 NGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEM---CKD 414

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V P+ +T + +INGFCK+G +  A+E+   + + G   N   ++TLI    + G+  EA
Sbjct: 415 GVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEA 474

Query: 344 LRL---------------CDEMV--------------------KRGLMPNNVVYNSTIHW 368
           ++                C+ +V                    + GL+PN+V ++  I+ 
Sbjct: 475 MKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING 534

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               GD  GA  V   MI     P  FTY  L K LC+     +A KL  ++    +  D
Sbjct: 535 YANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVD 594

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA-VQVY 487
             SYN LI  + KS NL  A +L   MI   ++PD  TY  ++ G  + G +  A + + 
Sbjct: 595 TISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLG 654

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
             M+K     N ++Y   I+GL K     AA  L +  +  GL LD I  N++ +GY   
Sbjct: 655 RLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRM 714

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           GK+  A ++ S+ RN  +  N   +NIL++   +        +L  +M   G  P+ +TY
Sbjct: 715 GKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTY 774

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            +L+     +   E  I++    +    + D+ T+N +I
Sbjct: 775 HSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLI 813



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 116/527 (22%), Positives = 223/527 (42%), Gaps = 42/527 (7%)

Query: 147  AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
              FD ++     +G   GA+ V  ++   GH  S   + + L  L K        KL K+
Sbjct: 526  VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKK 585

Query: 207  MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            +       +  ++N +I  + K   L EA+ L+  M+++ I P+   +  I++   + G 
Sbjct: 586  LHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGR 645

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            L  A     ++  M  + +  NS+ + C I+G  K G+ + A  +   M + G+  ++  
Sbjct: 646  LVCAFIFLGRL--MQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIA 703

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
              ++ DGY+R G    A  L  +   + ++PN   +N  +H      D+     + + M 
Sbjct: 704  LNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMR 763

Query: 387  DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                 P+  TY  L  GLC +G ++   K+    + E    D  ++N+LI   C+ N+L 
Sbjct: 764  RSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLD 823

Query: 447  AAKQL-----------------------------------LSSMIVRGLIPDIITYGTLI 471
                L                                   +  M+ +G IP    Y T++
Sbjct: 824  KVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMM 883

Query: 472  DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
               C+ G+I+GA ++ + M  +    +     +++ GL     ++ A  +LQ   R+  +
Sbjct: 884  KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943

Query: 532  DAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
                T+ TL++ +       EA  +   M +  + ++ V YN+LI+  C  G    A + 
Sbjct: 944  PTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDF 1003

Query: 591  MKVMILHGIIPDYVTYTTLVTRFSKN--CSPEEVI--ELHDDMVLSG 633
             + +   G++P+  TY  LV+  S     S  E++  +L+D  ++SG
Sbjct: 1004 YEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSG 1050



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 83/198 (41%), Gaps = 13/198 (6%)

Query: 145  TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
            T   +  +++   ++G  +GA+ +  ++   G S+   A    +  L    +I     + 
Sbjct: 875  TSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWIL 934

Query: 205  KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            + M+    +   +TF  +++  CK+   +EA +L   M    +  ++V +N++I+  C  
Sbjct: 935  QRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCAN 994

Query: 265  GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
            GD+  AL  + +   +    +LPN  T+  +++       V   E +   +   G     
Sbjct: 995  GDVITALDFYEE---IKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRG----- 1046

Query: 325  RTYATLIDGYARGGSSEE 342
                 L+ GY  G S + 
Sbjct: 1047 -----LVSGYLDGKSQKS 1059


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 186/643 (28%), Positives = 320/643 (49%), Gaps = 16/643 (2%)

Query: 8   CLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKW---KILEQMAPSLTNSLVN 64
           CL +     +R FH    F   S  +IV        R+++W   +I+     +L     +
Sbjct: 51  CLIRFPFVSNRHFHNFDCFDKDSVREIV--------REQRWDDFRIVSLFDSALAPIWAS 102

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
           RV+ E  +  +LAL F+ W      F H+ E+ C +VH+L   R + DA  ++  L+   
Sbjct: 103 RVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLR 162

Query: 125 SVSP-LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
            V P  +  + L  +  +C     VFDAL  A  ++G  E A +   K++         +
Sbjct: 163 RVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRS 222

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
            N  L  L K+       K +K+M + G   +V T+N++I  LCKE  LE A SL+ +M 
Sbjct: 223 CNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK 282

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++G  P++V +N +I+   ++G L+  + +F +M     D   P+ +T+N +IN FCK  
Sbjct: 283 EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD---PDVITYNALINCFCKFE 339

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R+  A E  + M   G+  NV TY+T ID + + G  +EA++   +M +  L PN   Y 
Sbjct: 340 RMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I      G++  AL ++ +++   I  +  TY+ L  GLC  G +K+A ++   +L  
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +  +Y  L++   K+  +  AK +L  M  + + PD++ YGT++ G C    +E A
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLING 542
             +   +K+     N VIY ++++   K      A +LL+    +GL+   +TY  LI+G
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +G + EA   F  M  +G+  N   Y  L++ LCK  C++ A++L   M+  G++PD
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            + YT L+    K+ + +E + L D M+  G+  D   Y A+I
Sbjct: 640 KIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALI 682



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 240/476 (50%), Gaps = 4/476 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E A  +  ++K  G +  I  +N+ +    KL  +     ++++M       +V T+
Sbjct: 269 GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 328

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I   CK  ++ +A    + M  +G+ PNVV ++  I+  C+ G L+ A+K F  M  
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           ++   + PN  T+  +I+  CK G +  A ++   +++AGI  NV TY  L+DG    G 
Sbjct: 389 VA---LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 445

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA  +   M+  G+ PN   Y + +H      ++E A  +L +M +K I PD   Y  
Sbjct: 446 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGT 505

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +  GLC    +++A  L  ++ E  +  +A  Y  L++   KS     A  LL  M+  G
Sbjct: 506 ILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           LI   +TY  LIDG CK G ++ A+  +  M ++  +PN+ +Y ++++GLCK+   + AK
Sbjct: 566 LIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAK 625

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L       G++ D I Y  LI+G   +G + EA  +   M  +G+ ++   Y  LI  L
Sbjct: 626 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 685

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
              G  Q+AR L+  MI  G++PD V Y  L+ ++      +E +EL ++M   G+
Sbjct: 686 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 228/500 (45%), Gaps = 41/500 (8%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYV--ENVNTFNLVIYALCKECKLEEALSLYYRM 242
           N  L  L+ L  +   W ++  + +   V       F+ +  AL +   LEEA   + +M
Sbjct: 152 NAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKM 211

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            K  ++P     N +++   +VG  + + K F+ MG      +  +  T+N +I+  CK 
Sbjct: 212 RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAG---IKRSVFTYNIMIDYLCKE 268

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +E A  +   M +AG   ++ TY +LIDG+ + G  +E + + ++M      P+ + Y
Sbjct: 269 GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 328

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ I+       +  A   L +M    + P+  TYS      C+ G +++A K    +  
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +  + ++Y  LI+  CK+ NLA A +L+  ++  G+  +++TY  L+DG C+ G ++ 
Sbjct: 389 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 448

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYN---- 537
           A +V+  M      PN   Y ++++G  K   ++ AK +L +  ++    D + Y     
Sbjct: 449 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 508

Query: 538 -------------------------------TLINGYFINGKIAEAFAMFSEMRNVGIAV 566
                                          TL++ YF +G+  EA  +  EM ++G+  
Sbjct: 509 GLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIA 568

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
            +V Y  LI+ LCK G  Q+A      M   G+ P+   YT LV    KN   E   +L 
Sbjct: 569 TEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLF 628

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
           D+M+  G+ PD   Y A+I 
Sbjct: 629 DEMLDKGMMPDKIAYTALID 648



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 190/429 (44%), Gaps = 38/429 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++AL+    +      A++ + ++K  G   ++  ++ F+    K   +    
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K + +M       N  T+  +I A CK   L EAL L   +L++GI  NVV +  +++  
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK---- 317
           C+ G ++ A ++FR    M    V PN  T+  +++GF K   +E+A++I   M +    
Sbjct: 441 CEEGRMKEAEEVFR---AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 497

Query: 318 -------------------------------AGIDCNVRTYATLIDGYARGGSSEEALRL 346
                                          +GI+ N   Y TL+D Y + G + EAL L
Sbjct: 498 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 557

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EM+  GL+   V Y + I  L   G V+ A+     M +  + P+   Y+ L  GLC+
Sbjct: 558 LEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           N C + A KL +++L++ M+ D  +Y  LI+   K  NL  A  L   MI  G+  D+  
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI G    G ++ A  + + M      P+ V+Y  +I        +D A  L     
Sbjct: 678 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMA 737

Query: 527 RIGLLDAIT 535
           + G++  ++
Sbjct: 738 KRGMITGLS 746



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 192/401 (47%), Gaps = 4/401 (0%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P    F+ + +   ++G LE A + F KM       V P   + N +++   K+GR + +
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFR---VFPKPRSCNALLHRLSKVGRGDLS 239

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M  AGI  +V TY  +ID   + G  E A  L  +M + G  P+ V YNS I  
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G ++  + +   M D    PD  TY+ L    C+   + +AF+  +++    +  +
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +Y+  I+  CK   L  A +    M    L P+  TY +LID  CK GN+  A+++ E
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            + +   K N+V Y ++++GLC++  +  A+ + +A    G+  +  TY  L++G+    
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++  A  +  EM+   I  + + Y  ++  LC     ++A+ L+  +   GI  + V YT
Sbjct: 480 EMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           TL+  + K+    E + L ++M+  G+     TY A+I  L
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGL 580



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 128/227 (56%), Gaps = 1/227 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           ++YNI+I+YLCK  +L  A+ L + M   G  PDI+TY +LIDG+ K G ++  + ++E 
Sbjct: 256 FTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 315

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           MK  +  P+++ YN++IN  CK   +  A   L   +  GL  + +TY+T I+ +   G 
Sbjct: 316 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA   F +MR V +  N+  Y  LI+  CK G   +A +L++ ++  GI  + VTYT 
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L+    +    +E  E+   M+ +GV+P+ +TY A++   +  K  E
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 147/322 (45%), Gaps = 5/322 (1%)

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL--FAEGDVEGALFVLSDMIDKHICPDHF 395
           G  EEA     +M K  + P     N+ +H L     GD+    F   DM    I    F
Sbjct: 199 GMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF--KDMGAAGIKRSVF 256

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY+I+   LC+ G ++ A  L  Q+ E     D  +YN LI+   K   L     +   M
Sbjct: 257 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
                 PD+ITY  LI+ +CK   +  A +    MK    KPN+V Y++ I+  CK+  L
Sbjct: 317 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 376

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
             A       +R+ L  +  TY +LI+     G +AEA  +  E+   GI +N V Y  L
Sbjct: 377 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 436

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           ++ LC+ G  ++A E+ + M+  G+ P+  TYT LV  F K    E   ++  +M    +
Sbjct: 437 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 496

Query: 635 SPDNQTYNAIISPLLGEKSAED 656
            PD   Y  I+  L  E   E+
Sbjct: 497 KPDLLLYGTILWGLCNESRLEE 518



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 1/199 (0%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +P    +  L     + G +E A + +  M+K    P     N++++ L K    D ++ 
Sbjct: 182 VPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRK 241

Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             +     G+  ++ TYN +I+     G +  A ++F++M+  G   + V YN LI+   
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +   + + M      PD +TY  L+  F K     +  E   +M  +G+ P+  
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361

Query: 640 TYNAIISPLLGEKSAEDQV 658
           TY+  I     E   ++ +
Sbjct: 362 TYSTFIDAFCKEGMLQEAI 380



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           S  +   L  LE +LD   I  AT   + AL+    + G  + A     ++   G   ++
Sbjct: 548 SGQATEALTLLEEMLDLGLI--ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV 605

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             +   +  L K N      KL+ EM+  G + +   +  +I    K   L+EAL+L  R
Sbjct: 606 AVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 665

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ G+  ++  +  +I      G ++ A  L  +M    G  VLP+ V + C+I  +  
Sbjct: 666 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM---IGKGVLPDEVVYMCLIKKYYA 722

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYA 328
           LG+V+ A E++  M K G+   +  +A
Sbjct: 723 LGKVDEALELQNEMAKRGMITGLSDHA 749


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 175/577 (30%), Positives = 289/577 (50%), Gaps = 28/577 (4%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
            P  AL F+ W  +   F H++ +   +   L+  RR D+   ++ N             
Sbjct: 3   DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPG-------- 54

Query: 133 EGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
                       TP VF    +++   + G  + A +++++++  G       +N  +  
Sbjct: 55  -----------ITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHA 103

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K     +    ++ M  C   +NV T+ ++I  LCK  +L EA + + +M K G  PN
Sbjct: 104 LCKARNTAKALDYFRSM-ECE--KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPN 160

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
              +N++IN  C+V  +  A  L ++M       + PN VT++ +I+GFC+  +V+ A +
Sbjct: 161 EWTYNVLINGFCKVHKVHRAYLLLKEM---KESGLAPNVVTYSTVIHGFCRQTKVDTAYK 217

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M++ G   N+ TY TL+ G  R G  +EA  L DEM +RGL P+   Y++ +  L 
Sbjct: 218 LFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLC 277

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G ++ AL V  D  +    PD   YS L  GLC+ G + +A KL  ++ E     D  
Sbjct: 278 KTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV 337

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           ++  L++ LCK + L  A+Q+L +M  R   P++ITY +LIDG CK G +  A +V++ M
Sbjct: 338 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 397

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
                +PN+V YNS+I+G C    +D+A  L++     G L D ITYNTLI+G    G+ 
Sbjct: 398 IVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 457

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            EA  +F +M+      + + Y+ LI   CK      AR L   M+   ++PD VT++TL
Sbjct: 458 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 517

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           V  +      ++   L ++MV S  SPD  TY +++ 
Sbjct: 518 VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 261/518 (50%), Gaps = 6/518 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    + G  + AY+++ +++ +G      +++  ++ L K  +I    
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 286

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++++  +     +V  ++ +I  LCK  +L+EA  L+ +M ++   P+VV F  +++  
Sbjct: 287 KVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   L+ A ++      M   +  PN +T++ +I+G CK G+V  A+E+   MI  GI+
Sbjct: 347 CKGDRLQEAQQVLE---TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 403

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY +LI G+      + AL L +EM   G +P+ + YN+ I  L   G    A  +
Sbjct: 404 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 463

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             DM  K   PD  TYS L  G C+   +  A  L + +L++ ++ D  +++ L+   C 
Sbjct: 464 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 523

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +  A++LL  M+     PD+ TY +L+DG+CK G +  A +V + M K   +PN+V 
Sbjct: 524 AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVT 583

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM- 559
           Y ++I+  C+      A  LL+     G+  + ITY +LI G+   G + EA  +   + 
Sbjct: 584 YTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE 643

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           R+     +   Y ++++ LC+ G    A EL++ +   G  P +  Y  L+    +    
Sbjct: 644 RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 703

Query: 620 EEVIELHDDMVLSGVS-PDNQTYNAIISPLLGEKSAED 656
            + +E+ ++M LS  S P+ + Y A+I  L  E   E+
Sbjct: 704 GKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 741



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 255/538 (47%), Gaps = 40/538 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    ++     AY +++++K  G + ++  ++  +    +  ++   +KL+++M
Sbjct: 163 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM 222

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN----------------- 250
           V  G + N+ T+N ++  LC+   ++EA  L   M + G+ P+                 
Sbjct: 223 VENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKI 282

Query: 251 ------------------VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
                             VV ++ +I   C+ G L+ A KLF KM     +S  P+ VT 
Sbjct: 283 DMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM---RENSCEPDVVTF 339

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             +++G CK  R++ A+++   M       NV TY++LIDG  + G   +A  +   M+ 
Sbjct: 340 TALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 399

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG+ PN V YNS IH       V+ AL ++ +M      PD  TY+ L  GLC+ G   +
Sbjct: 400 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 459

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   +  +    D  +Y+ LI   CK   +  A+ L   M+ + ++PD++T+ TL++
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 519

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GYC  G ++ A ++ E M   +  P++  Y S+++G CK   +  A+ +L+   + G   
Sbjct: 520 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 579

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +TY  LI+ +   GK   A+ +  EM   G+  N + Y  LI   C  G  ++AR+++
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKIL 639

Query: 592 KVMIL-HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + +        D   Y  ++    +       +EL + +  SG  P +  Y A+I  L
Sbjct: 640 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 697



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 204/421 (48%), Gaps = 6/421 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F AL+    +    + A  V++ ++ +  + ++  +++ +  L K  ++    
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +++K M+  G   NV T+N +I+  C    ++ AL L   M  +G  P+++ +N +I+  
Sbjct: 392 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 451

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G    A +LF   G M      P+ +T++C+I GFCKL R++ A  +   M+K  + 
Sbjct: 452 CKTGRAPEANRLF---GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 508

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T++TL++GY   G  ++A RL +EMV     P+   Y S +      G +  A  V
Sbjct: 509 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 568

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M  +   P+  TY+ L    CR G    A++L  +++   +  +  +Y  LI   C 
Sbjct: 569 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCG 628

Query: 442 SNNLAAAKQLLSSMIV-RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           + +L  A+++L  +        D+  Y  ++DG C+ G +  A+++ E +K+    P   
Sbjct: 629 TGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHD 688

Query: 501 IYNSIINGLCKDASLDAAKSLLQAS--QRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           IY ++I GLC+   L  A  +L+     R    +A  Y  +I      G+  EA A+  E
Sbjct: 689 IYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADE 748

Query: 559 M 559
           +
Sbjct: 749 L 749



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 201/397 (50%), Gaps = 7/397 (1%)

Query: 129 LEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L+  + +L++ E    TP V  + +L+    + G    A +V +++ V+G   ++  +N+
Sbjct: 352 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 411

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +      N +     L +EM + G + ++ T+N +I  LCK  +  EA  L+  M    
Sbjct: 412 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P+V+ ++ +I   C++  ++ A  LF  M      +VLP+ VT + ++ G+C  G V+
Sbjct: 472 CNPDVITYSCLIGGFCKLERIDMARTLFDDM---LKQAVLPDVVTFSTLVEGYCNAGLVD 528

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            AE +   M+ +    +V TY +L+DG+ + G   EA R+   M KRG  PN V Y + I
Sbjct: 529 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV-LEEHM 425
                 G    A  +L +M+   + P+  TY  L  G C  G +++A K+  ++  +E+ 
Sbjct: 589 DAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENC 648

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D ++Y ++++ LC++  ++AA +LL ++   G  P    Y  LI G C+G  +  A++
Sbjct: 649 KADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAME 708

Query: 486 VYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSL 521
           V E M    K +PN   Y ++I  L ++   + A +L
Sbjct: 709 VLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 745



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 134/259 (51%), Gaps = 6/259 (2%)

Query: 393 DH--FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
           DH  +TY+ L + L R   + +   +        +  + ++Y ++I  LCKS +L  A +
Sbjct: 21  DHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACE 80

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL  M   G +PD   Y  +I   CK  N   A+  + +M   E + N++ +  +I+GLC
Sbjct: 81  LLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIMIDGLC 137

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   L  A +     ++ G + +  TYN LING+    K+  A+ +  EM+  G+A N V
Sbjct: 138 KANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVV 197

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y+ +I+  C+      A +L + M+ +G +P+ VTY TL++   +N   +E  EL D+M
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257

Query: 630 VLSGVSPDNQTYNAIISPL 648
              G+ PD  +Y+ +++ L
Sbjct: 258 RERGLQPDKFSYDTLMAGL 276


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 198/684 (28%), Positives = 329/684 (48%), Gaps = 53/684 (7%)

Query: 2   FSAFCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNS 61
           FS +       +   SRA++   Q +    E  ++  + ++    +W+ L  MA  L   
Sbjct: 31  FSEYVKERLGXDDAKSRAWNT-TQTSGSDVESSIYTILTID----RWESLNHMAYGL--- 82

Query: 62  LVNRVVSEFRK-SPKLALEFYTWVGENN--RFSHSLESSCAIVHLLVNWRRFDDALLLMG 118
                  + R    +LAL+F  WV +       H     C   H+LV  R +D A  ++ 
Sbjct: 83  ------KQLRPVHGRLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILR 136

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           +L     +        L+D+Y +C + P+VFD L+R   + G  + A +  + + + G  
Sbjct: 137 HLCQM-GIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFK 195

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
            S++  N  L+ +VK       W L++EM   G   NV TFN++I  LC E  L++A +L
Sbjct: 196 PSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNL 255

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GV---------------- 279
             +M ++G  P +V +N ++N  C+ G  + A++L   M   G+                
Sbjct: 256 LKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCT 315

Query: 280 -------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
                        M  + + PN VT+N +INGF K G++  A ++   M K  +  N  T
Sbjct: 316 NHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVT 375

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LI G+   G  EEALRL D M   GL  N V Y + ++ L      E A  +L  M 
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +   H  Y++L  GLC+NG + +A +L   + ++ +  D  +Y+ LIN  C+  N+ 
Sbjct: 436 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           +AK+++  M   GL+ + I Y TLI  +C+ GN+  A++VY  M       +    N ++
Sbjct: 496 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 555

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LC+D  L  A+  L    RIGL+ ++ITY+ +INGY   G    AF+ F +M   G  
Sbjct: 556 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH 615

Query: 566 VNKVGYNILINFLCKFGCYQQARELM-KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            +   Y  L+  LCK G   +A++ + ++  + G + D V Y TL+    K+ +  E + 
Sbjct: 616 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV-DSVMYNTLLAETCKSGNLHEAVA 674

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           L D MV + V PD+ TY+++++ L
Sbjct: 675 LFDKMVQNNVLPDSYTYSSLLTGL 698



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 249/550 (45%), Gaps = 43/550 (7%)

Query: 136 LDSYEICKATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L  Y ICK   A    ++  +        +  AY +++K++ +  S +   +N  ++  V
Sbjct: 290 LIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFV 349

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  +IG   +++ EM       N  T+N +I   C     EEAL L   M  +G+  N V
Sbjct: 350 KEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEV 409

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  ++N  C+    E A +L  +M V   + ++   + +  +I+G CK G ++ A ++ 
Sbjct: 410 TYGTLLNGLCKHEKFELAKRLLERMRV---NDMVVGHIAYTVLIDGLCKNGMLDEAVQLV 466

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M K G++ +V TY++LI+G+ R G+ + A  +   M + GL+ N ++Y++ I+     
Sbjct: 467 GNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQH 526

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G+V  A+ V + M       DHFT ++L   LCR+G + +A K    +    +V ++ +Y
Sbjct: 527 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 586

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG--------------- 477
           + +IN      +   A      MI  G  P   TYG+L+ G CKG               
Sbjct: 587 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 646

Query: 478 --------------------GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
                               GN+  AV +++ M +    P+   Y+S++ GLC+      
Sbjct: 647 IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 706

Query: 518 AKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
           A  L   +   G L  + + Y  L++G    G    AF  F EM   G   + V +N +I
Sbjct: 707 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 766

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           +   + G   +A +    M   G+ P+  TY  L+  FSK  +    + L+  M+  G+ 
Sbjct: 767 DSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF 826

Query: 636 PDNQTYNAII 645
           PD  T++++I
Sbjct: 827 PDKLTFHSLI 836



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 259/553 (46%), Gaps = 26/553 (4%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
            D+A+ L+GN M  + V+P                    + +L+    ++G  + A ++I
Sbjct: 459 LDEAVQLVGN-MYKDGVNP----------------DVITYSSLINGFCRVGNIKSAKEII 501

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            ++   G  ++   ++  + +  +   +    K+Y  M   G+  +  T N+++ +LC++
Sbjct: 502 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 561

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            KL EA      M + G+ PN + ++ IIN    +GD   A   F  M +  G    P+ 
Sbjct: 562 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM-IKCGQH--PSF 618

Query: 290 VTHNCIINGFCKLGRVEFAEEI--RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
            T+  ++ G CK G +  A++   R   I   +D  +  Y TL+    + G+  EA+ L 
Sbjct: 619 FTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM--YNTLLAETCKSGNLHEAVALF 676

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCR 406
           D+MV+  ++P++  Y+S +  L  +G    A+ +    + +  + P+H  Y+ L  GL +
Sbjct: 677 DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSK 736

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G  K AF    +++++    D  ++N +I+   +   +  A    S+M   G+ P++ T
Sbjct: 737 AGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLAT 796

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  L+ G+ K   +   + +Y  M +    P+ + ++S+I GL K    D    LL    
Sbjct: 797 YNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMI 856

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G L D  T+N LIN Y  +GK+ +AF + + M  +G+  ++  YN + N L K   ++
Sbjct: 857 MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFR 916

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           ++  ++  M+ +G+IP +  Y TL+    +    +   +L D+M   G        +A++
Sbjct: 917 ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 976

Query: 646 SPLLGEKSAEDQV 658
             LL     ED +
Sbjct: 977 RGLLHCGKTEDAM 989



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 226/477 (47%), Gaps = 7/477 (1%)

Query: 142  CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
            C   P+ F   +L++   + G    A   + +L     +V    +N  L+   K   +  
Sbjct: 612  CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 671

Query: 200  FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMII 258
               L+ +MV    + +  T++ ++  LC++ K   A+ L+   +  G ++PN V +  ++
Sbjct: 672  AVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 731

Query: 259  NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
            +   + G  + A   F +M         P++V  N II+   + G++  A +    M   
Sbjct: 732  DGLSKAGHPKAAFYFFEEM---MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWW 788

Query: 319  GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            G+  N+ TY  L+ G+++  +    L L   M++ G+ P+ + ++S I  L   G  +  
Sbjct: 789  GVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLG 848

Query: 379  LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
            + +L  MI +    D FT++IL      +G +++AF L N +    +  D  +YN + N 
Sbjct: 849  VKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNG 908

Query: 439  LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            L K +    +  +L  M+  G+IP    Y TLI+G C+ G+I+GA ++ + M+ +    +
Sbjct: 909  LNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSH 968

Query: 499  LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFS 557
             V  ++++ GL      + A  +L    R+ LL  I T+ TL++ +  + KIAEA  +  
Sbjct: 969  EVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKG 1028

Query: 558  EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
             M   G+ ++ V YN+LI  +C  G    A EL + M    + P+  TY  LV   S
Sbjct: 1029 VMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1085



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 183/384 (47%), Gaps = 3/384 (0%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++  LV   ++ G  + A+   +++  KG      A+N  +    +  ++ +    +  M
Sbjct: 726  MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
               G   N+ T+N++++   K+  L   LSLY  M++ GI+P+ + F+ +I    + G  
Sbjct: 786  RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845

Query: 268  EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
            +  +KL  KM +M G   L +  T N +IN + + G++  A ++   M   G+  +  TY
Sbjct: 846  DLGVKLLGKM-IMEG--TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTY 902

Query: 328  ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
              + +G  +  +  E+  +  EM++ G++P +  Y + I+ +   GD++GA  +  +M  
Sbjct: 903  NHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 962

Query: 388  KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                      S + +GL   G  + A  + + +L   ++    ++  L++  C+   +A 
Sbjct: 963  LGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 1022

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            A +L   M + GL  D++ Y  LI G C  G+   A ++YE M+  +  PN+  Y  +++
Sbjct: 1023 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1082

Query: 508  GLCKDASLDAAKSLLQASQRIGLL 531
             +    +L   + LL   Q  GL+
Sbjct: 1083 AISAANNLIQGEKLLTDLQERGLI 1106



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 3/192 (1%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           IP +  +  LI  Y K G I+ AV+ +E +  V  KP++   N I+  + KD   +   S
Sbjct: 162 IPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 219

Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L +     G+   + T+N LING  + G + +A  +  +M   G     V YN L+N+ C
Sbjct: 220 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G Y+ A EL+  MI  GI  D  TY   +     N    +   L   M    +SP+  
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339

Query: 640 TYNAIISPLLGE 651
           TYN +I+  + E
Sbjct: 340 TYNTLINGFVKE 351


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 196/669 (29%), Positives = 325/669 (48%), Gaps = 53/669 (7%)

Query: 17   SRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRK-SPK 75
            SRA++   Q +    E  ++  + ++    +W+ L  MA  L          + R    +
Sbjct: 797  SRAWNT-TQTSGSDVESSIYTILTID----RWESLNHMAYGL---------KQLRPVHGR 842

Query: 76   LALEFYTWVGENN--RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE 133
            LAL+F  WV +       H     C   H+LV  R +D A  ++ +L     +       
Sbjct: 843  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMG-IGSKSIFG 901

Query: 134  GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
             L+D+Y +C + P+VFD L+R   + G  + A +  + + + G   S++  N  L+ +VK
Sbjct: 902  ALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 961

Query: 194  LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
                   W L++EM   G   NV TFN++I  LC E  L++A +L  +M ++G  P +V 
Sbjct: 962  DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 1021

Query: 254  FNMIINEACQVGDLEFALKLFRKM---GV-----------------------------MS 281
            +N ++N  C+ G  + A++L   M   G+                             M 
Sbjct: 1022 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 1081

Query: 282  GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
             + + PN VT+N +INGF K G++  A ++   M K  +  N  TY  LI G+   G  E
Sbjct: 1082 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 1141

Query: 342  EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            EALRL D M   GL  N V Y + ++ L      E A  +L  M    +   H  Y++L 
Sbjct: 1142 EALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLI 1201

Query: 402  KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
             GLC+NG + +A +L   + ++ +  D  +Y+ LIN  C+  N+ +AK+++  M   GL+
Sbjct: 1202 DGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261

Query: 462  PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
             + I Y TLI  +C+ GN+  A++VY  M       +    N +++ LC+D  L  A+  
Sbjct: 1262 LNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKF 1321

Query: 522  LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            L    RIGL+ ++ITY+ +INGY   G    AF+ F +M   G   +   Y  L+  LCK
Sbjct: 1322 LCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCK 1381

Query: 581  FGCYQQARELM-KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G   +A++ + ++  + G + D V Y TL+    K+ +  E + L D MV + V PD+ 
Sbjct: 1382 GGNLVEAKKFLNRLHYIPGAV-DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440

Query: 640  TYNAIISPL 648
            TY+++++ L
Sbjct: 1441 TYSSLLTGL 1449



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 249/550 (45%), Gaps = 43/550 (7%)

Query: 136  LDSYEICKATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
            L  Y ICK   A    ++  +        +  AY +++K++ +  S +   +N  ++  V
Sbjct: 1041 LIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFV 1100

Query: 193  KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
            K  +IG   +++ EM       N  T+N +I   C     EEAL L   M  +G+  N V
Sbjct: 1101 KEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEV 1160

Query: 253  CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             +  ++N  C+    E A +L  +M V   + ++   + +  +I+G CK G ++ A ++ 
Sbjct: 1161 TYGTLLNGLCKHEKFELAKRLLERMRV---NDMVVGHIAYTVLIDGLCKNGMLDEAVQLV 1217

Query: 313  YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
              M K G++ +V TY++LI+G+ R G+ + A  +   M + GL+ N ++Y++ I+     
Sbjct: 1218 GNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQH 1277

Query: 373  GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            G+V  A+ V + M       DHFT ++L   LCR+G + +A K    +    +V ++ +Y
Sbjct: 1278 GNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 1337

Query: 433  NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG--------------- 477
            + +IN      +   A      MI  G  P   TYG+L+ G CKG               
Sbjct: 1338 DCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHY 1397

Query: 478  --------------------GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
                                GN+  AV +++ M +    P+   Y+S++ GLC+      
Sbjct: 1398 IPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVT 1457

Query: 518  AKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  L   +   G L  + + Y  L++G    G    AF  F EM   G   + V +N +I
Sbjct: 1458 AVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAII 1517

Query: 576  NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
            +   + G   +A +    M   G+ P+  TY  L+  FSK  +    + L+  M+  G+ 
Sbjct: 1518 DSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF 1577

Query: 636  PDNQTYNAII 645
            PD  T++++I
Sbjct: 1578 PDKLTFHSLI 1587



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 259/553 (46%), Gaps = 26/553 (4%)

Query: 110  FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
             D+A+ L+GN M  + V+P                    + +L+    ++G  + A ++I
Sbjct: 1210 LDEAVQLVGN-MYKDGVNP----------------DVITYSSLINGFCRVGNIKSAKEII 1252

Query: 170  QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
             ++   G  ++   ++  + +  +   +    K+Y  M   G+  +  T N+++ +LC++
Sbjct: 1253 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 1312

Query: 230  CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
             KL EA      M + G+ PN + ++ IIN    +GD   A   F  M +  G    P+ 
Sbjct: 1313 GKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM-IKCGQH--PSF 1369

Query: 290  VTHNCIINGFCKLGRVEFAEEI--RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
             T+  ++ G CK G +  A++   R   I   +D  +  Y TL+    + G+  EA+ L 
Sbjct: 1370 FTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVM--YNTLLAETCKSGNLHEAVALF 1427

Query: 348  DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCR 406
            D+MV+  ++P++  Y+S +  L  +G    A+ +    + +  + P+H  Y+ L  GL +
Sbjct: 1428 DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSK 1487

Query: 407  NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
             G  K AF    +++++    D  ++N +I+   +   +  A    S+M   G+ P++ T
Sbjct: 1488 AGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLAT 1547

Query: 467  YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
            Y  L+ G+ K   +   + +Y  M +    P+ + ++S+I GL K    D    LL    
Sbjct: 1548 YNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMI 1607

Query: 527  RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
              G L D  T+N LIN Y  +GK+ +AF + + M  +G+  ++  YN + N L K   ++
Sbjct: 1608 MEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFR 1667

Query: 586  QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            ++  ++  M+ +G+IP +  Y TL+    +    +   +L D+M   G        +A++
Sbjct: 1668 ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 1727

Query: 646  SPLLGEKSAEDQV 658
              LL     ED +
Sbjct: 1728 RGLLHCGKTEDAM 1740



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 226/477 (47%), Gaps = 7/477 (1%)

Query: 142  CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
            C   P+ F   +L++   + G    A   + +L     +V    +N  L+   K   +  
Sbjct: 1363 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 1422

Query: 200  FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMII 258
               L+ +MV    + +  T++ ++  LC++ K   A+ L+   +  G ++PN V +  ++
Sbjct: 1423 AVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 1482

Query: 259  NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
            +   + G  + A   F +M         P++V  N II+   + G++  A +    M   
Sbjct: 1483 DGLSKAGHPKAAFYFFEEM---MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWW 1539

Query: 319  GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            G+  N+ TY  L+ G+++  +    L L   M++ G+ P+ + ++S I  L   G  +  
Sbjct: 1540 GVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLG 1599

Query: 379  LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
            + +L  MI +    D FT++IL      +G +++AF L N +    +  D  +YN + N 
Sbjct: 1600 VKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNG 1659

Query: 439  LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            L K +    +  +L  M+  G+IP    Y TLI+G C+ G+I+GA ++ + M+ +    +
Sbjct: 1660 LNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSH 1719

Query: 499  LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFS 557
             V  ++++ GL      + A  +L    R+ LL  I T+ TL++ +  + KIAEA  +  
Sbjct: 1720 EVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKG 1779

Query: 558  EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
             M   G+ ++ V YN+LI  +C  G    A EL + M    + P+  TY  LV   S
Sbjct: 1780 VMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1836



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 183/384 (47%), Gaps = 3/384 (0%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++  LV   ++ G  + A+   +++  KG      A+N  +    +  ++ +    +  M
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
               G   N+ T+N++++   K+  L   LSLY  M++ GI+P+ + F+ +I    + G  
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 268  EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
            +  +KL  KM +M G   L +  T N +IN + + G++  A ++   M   G+  +  TY
Sbjct: 1597 DLGVKLLGKM-IMEG--TLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTY 1653

Query: 328  ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
              + +G  +  +  E+  +  EM++ G++P +  Y + I+ +   GD++GA  +  +M  
Sbjct: 1654 NHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEA 1713

Query: 388  KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                      S + +GL   G  + A  + + +L   ++    ++  L++  C+   +A 
Sbjct: 1714 LGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAE 1773

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            A +L   M + GL  D++ Y  LI G C  G+   A ++YE M+  +  PN+  Y  +++
Sbjct: 1774 ALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVD 1833

Query: 508  GLCKDASLDAAKSLLQASQRIGLL 531
             +    +L   + LL   Q  GL+
Sbjct: 1834 AISAANNLIQGEKLLTDLQERGLI 1857



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 3/192 (1%)

Query: 461  IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            IP +  +  LI  Y K G I+ AV+ +E +  V  KP++   N I+  + KD   +   S
Sbjct: 913  IPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 970

Query: 521  LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            L +     G+   + T+N LING  + G + +A  +  +M   G     V YN L+N+ C
Sbjct: 971  LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 1030

Query: 580  KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
            K G Y+ A EL+  MI  GI  D  TY   +     N    +   L   M    +SP+  
Sbjct: 1031 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090

Query: 640  TYNAIISPLLGE 651
            TYN +I+  + E
Sbjct: 1091 TYNTLINGFVKE 1102


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 186/658 (28%), Positives = 336/658 (51%), Gaps = 16/658 (2%)

Query: 2   FSAFCNCLYKSNSPLSRAFHVGKQF-------ANPSTEDIVFRAICVNLRQRKWKILEQM 54
           FS F   L  S   L R  H+ +         ++P+  ++V R IC  +  R+   + ++
Sbjct: 5   FSIFTPPL-PSRLHLRRPIHLSRTLLWKLRDESHPAPPELVSR-ICRLVLLRRCNAISKL 62

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
               ++ +V+ V+   R +P  +L F+ +V +   F  +++S C +VH+L   R +D+  
Sbjct: 63  NFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETR 122

Query: 115 LLMGNLMSANSVSPLE--FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
             +  L+             + L+  Y     +P VFD +++   + G T+ A  V   +
Sbjct: 123 AYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNM 182

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
              G   S+ + N+ L++LVK  E      +Y++M+  G V +V   ++++ A CK+ K+
Sbjct: 183 GKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKV 242

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +EA     +M   G+ PN+V ++ +IN    +GD+E A  + +    MS   V  N VT+
Sbjct: 243 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLK---FMSEKGVSRNVVTY 299

Query: 293 NCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
             +I G+CK  +++ AE++   M  +A +  + R Y  LIDGY R G  ++A+RL DEM+
Sbjct: 300 TLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML 359

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + GL  N  + NS I+     G++  A  V++ M+D ++ PD ++Y+ L  G CR G   
Sbjct: 360 RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTS 419

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF L +++L+E +     +YN L+  LC+      A Q+   M+ RG+ PD + Y TL+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLL 479

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG  K  N EGA  +++++       + + +N++I+GLCK   +  A+ +    + +G  
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITY TLI+GY     + +AF +   M    I+ +   YN LI+ L K     +  +L
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDL 599

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  M + G+ P+ VTY  L+  + K    ++    + +M  +G+S +    + ++S L
Sbjct: 600 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 261/515 (50%), Gaps = 10/515 (1%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF    +V A  + G  + A   ++K++  G   +I  +++ ++  V L ++     +
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEAC 262
            K M   G   NV T+ L+I   CK+CK++EA  +   M + + + P+   + ++I+  C
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G ++ A++L  +M  +    +  N    N +ING+CK G +  AE +   M+   +  
Sbjct: 344 RTGKIDDAVRLLDEMLRLG---LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  +Y TL+DGY R G + EA  LCD+M++ G+ P  + YN+ +  L   G  + AL + 
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ + + PD   YS L  GL +    + A  L   +L         ++N +I+ LCK 
Sbjct: 461 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A+++   M   G  PD ITY TLIDGYCK  N+  A +V   M++    P++ +Y
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 580

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I+GL K   L     LL      GL  + +TY  LI+G+   G + +AF+ + EM  
Sbjct: 581 NSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 640

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G++ N +  + +++ L + G   +A  LM+ M+ HG  PD+  +     R++   + ++
Sbjct: 641 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA---AIQK 697

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + +  D+   + + P+N  YN  I+ L      +D
Sbjct: 698 IADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 271/536 (50%), Gaps = 13/536 (2%)

Query: 99  AIVHLLVNWRRFDDA----LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
            ++  +V+W    D+     LL G     ++       + +L   E  + T   ++ L++
Sbjct: 388 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ--EGIEPTVLTYNTLLK 445

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
              ++GA + A  +   +  +G +     ++  L  L K+        L+K++++ G+ +
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +  TFN +I  LCK  K+ EA  ++ +M   G  P+ + +  +I+  C+  ++  A   F
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA---F 562

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           +  G M  + + P+   +N +I+G  K  R+    ++   M   G+  N+ TY  LIDG+
Sbjct: 563 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 622

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  ++A     EM + GL  N ++ ++ +  L+  G ++ A  ++  M+D    PDH
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
                  K   R   +++     ++  +  ++ +   YNI I  LCK+  +  A++  S 
Sbjct: 683 ---ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           + ++G +PD  TY TLI GY   GN++ A ++ + M +    PN+V YN++INGLCK  +
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A+ L     + GL  + +TYNTLI+GY   G +  AF +  +M   GI+ + V Y+ 
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           LIN LCK G  +++ +L+  MI  G+    + Y TLV  + ++   +++ +L+D M
Sbjct: 860 LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMM 915



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 253/541 (46%), Gaps = 24/541 (4%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           + DDA+ L+  ++     + L     L++ Y  CK              +I   EG    
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGY--CKRG------------EIHEAEGVITR 392

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +    +K  S   +++N  L    +       + L  +M+  G    V T+N ++  LC+
Sbjct: 393 MVDWNLKPDS---YSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
               ++AL +++ M+K G+ P+ V ++ +++   ++ + E A  L++ +          +
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI---LARGFTKS 506

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            +T N +I+G CK+G++  AEEI   M   G   +  TY TLIDGY +  +  +A ++  
Sbjct: 507 RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 566

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M +  + P+  +YNS I  LF    +     +L++M  + + P+  TY  L  G C+ G
Sbjct: 567 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + +AF  + ++ E  +  +    + +++ L +   +  A  L+  M+  G  PD   + 
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HE 683

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             +    +   I+      +   K    PN ++YN  I GLCK   +D A+         
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + D  TY TLI+GY   G + EAF +  EM   G+  N V YN LIN LCK     +A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
           + L   +   G+ P+ VTY TL+  + K  + +   +L D M+  G+SP   TY+A+I+ 
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863

Query: 648 L 648
           L
Sbjct: 864 L 864



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 164/373 (43%), Gaps = 70/373 (18%)

Query: 165 AYDVIQKLKVKGH------SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           A +V Q  KVKG       S SI  +N+ +S L K   +     L  EM   G   N+ T
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM- 277
           +  +I   CKE  L++A S Y+ M ++G+  N++  + +++   ++G ++ A  L +KM 
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 278 --GVMS------------------GDSV--------LPNSVTHNCIINGFCKLGRVEFAE 309
             G                      DS+        LPN++ +N  I G CK G+V+ A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN----------- 358
                +   G   +  TY TLI GY+  G+ +EA RL DEM++RGL+PN           
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 359 ------------------------NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                                    V YN+ I      G+++ A  +   MI++ I P  
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TYS L  GLC++G ++++ KL NQ+++  +      Y  L+    +S  +    +L   
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDM 914

Query: 455 MIVRGLIPDIITY 467
           M +R L    I++
Sbjct: 915 MHIRCLSTTAISH 927


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 178/589 (30%), Positives = 297/589 (50%), Gaps = 17/589 (2%)

Query: 29  PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENN 88
           P T +I+  +I    R  +W I+E +A  LT SLV+  +    K+P LA  F   +   +
Sbjct: 44  PITSEILLESI----RSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHI---D 96

Query: 89  RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA--NSVSPLEFLEGLLDSYEICKATP 146
            +    ++ C  + ++           L+  ++++  NS+  L F E +L    +   + 
Sbjct: 97  LYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNL-FDELVLAHDRLETKST 155

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +FD LVR C Q+   + A +    +K KG        N+ L+ L +LN I   W  Y +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       NV TFN++I  LCKE KL++A      M   GI P +V +N ++      G 
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A  +  +M         P+  T+N I++  C  GR   A E+   M + G+  +  +
Sbjct: 276 IEGARLIISEM---KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVS 329

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LI G +  G  E A    DEMVK+G++P    YN+ IH LF E  +E A  ++ ++ 
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K I  D  TY+IL  G C++G  K+AF LH++++ + +    ++Y  LI  LC+ N   
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L   ++ +G+ PD++   TL+DG+C  GN++ A  + + M  +   P+ V YN ++
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLC +   + A+ L+   +R G+  D I+YNTLI+GY   G    AF +  EM ++G  
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
              + YN L+  L K    + A EL++ M   GI+P+  ++ +++   S
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 227/438 (51%), Gaps = 7/438 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L++   C+   ++EA+  +Y M + G +P     N I+    ++  +E A   +  M 
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M   S   N  T N +IN  CK G+++ A+     M   GI   + TY TL+ G++  G
Sbjct: 218 RMEIKS---NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E A  +  EM  +G  P+   YN  + W+  EG    A  VL +M +  + PD  +Y+
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYN 331

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL +G   NG ++ AF   ++++++ MV   Y+YN LI+ L   N + AA+ L+  +  +
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G++ D +TY  LI+GYC+ G+ + A  +++ M     +P    Y S+I  LC+      A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +     G+  D +  NTL++G+   G +  AF++  EM  + I  + V YN L+  
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LC  G +++ARELM  M   GI PD+++Y TL++ +SK    +    + D+M+  G +P 
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571

Query: 638 NQTYNAIISPLLGEKSAE 655
             TYNA++  L   +  E
Sbjct: 572 LLTYNALLKGLSKNQEGE 589



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 42/408 (10%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           + + F++++   CQ+  ++ A++ F    +M      P + T N I+    +L R+E A 
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFY---LMKEKGFYPKTETCNHILTLLSRLNRIENAW 210

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                M +  I  NV T+  +I+   + G  ++A      M   G+ P  V YN+ +   
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G +EGA  ++S+M  K   P                                   D 
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQP-----------------------------------DM 295

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YN +++++C   N   A ++L  M   GL+PD ++Y  LI G    G++E A    + 
Sbjct: 296 QTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M K    P    YN++I+GL  +  ++AA+ L++  +  G+ LD++TYN LINGY  +G 
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
             +AFA+  EM   GI   +  Y  LI  LC+    ++A EL + ++  G+ PD V   T
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+       + +    L  +M +  ++PD+ TYN ++  L GE   E+
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 280/528 (53%), Gaps = 5/528 (0%)

Query: 126 VSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           +  LE  E L     +    P +  ++ L+    ++   E AY+++ ++K +  + + + 
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
               ++ L    ++ R  +L++EM+S G   N+  +  ++  L KE + EEA+ +   M 
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+ P+V C+N +I   C+ G +E       +M       + PN  T+   I+G+C+ G
Sbjct: 505 DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEM---IAKGLKPNVYTYGAFIHGYCRAG 561

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            ++ AE     M+ +GI  N      LIDGY + G++ +A      M+ +G++P+   ++
Sbjct: 562 EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             IH L   G ++ A+ V S+++DK + PD FTY+ L   LC+ G +K AF+LH+ + ++
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +  +YN LIN LCK   +A A++L   +  +GL  + +TY T+I GYCK  N+  A
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGY 543
            Q++  MK V   P+  +Y ++I+G CK  + + A SL       G+     +N LI+G+
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGF 801

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
           F  GK+ EA+ +  +M +  I  N V Y ILI + C  G  ++A +L   M    ++P+ 
Sbjct: 802 FKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNV 861

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +TYT+L+  +++     E+  L D+MV  G+ PD+  ++ ++   L E
Sbjct: 862 LTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKE 909



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 188/708 (26%), Positives = 311/708 (43%), Gaps = 124/708 (17%)

Query: 27  ANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKS-----PKLALEFY 81
           A+ +  D   + I   L+Q+ W+ L + +P L N L   VV    K      PK    F+
Sbjct: 36  ADTNQSDNTVKEITSLLKQKNWQFLIESSP-LPNKLNPDVVFLVIKQNQVIDPKRLHGFF 94

Query: 82  TWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYE- 140
            WV     FS +L +   +  +L N   F +A  ++  ++   +   ++ L+ ++  Y+ 
Sbjct: 95  NWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRN-PHVKILDSIIKCYKE 153

Query: 141 ----ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
                  ++  VF+ L+    + G    A  V    K     V +   N+    L+K N 
Sbjct: 154 INGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNR 213

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           +  FWK+YK M+                                      I P+V  +  
Sbjct: 214 VELFWKVYKGMLG------------------------------------AIVPDVYTYTN 237

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +IN  C+VG +E    +   M        +PN VT++ +I G C+ G V+ A E++ +M 
Sbjct: 238 LINAYCRVGKVEEGKHVLFDM---EEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMA 294

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G+  +   YATLIDG+ R   S E   + DEM   GL P++V Y + I+    + D+ 
Sbjct: 295 NKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIG 354

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA----------------------- 413
           GA  V  +M  + I  + FTY  L  GLC+ G +++A                       
Sbjct: 355 GAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI 414

Query: 414 ---FKLHN---------QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
              +K+ N         ++ +E++  +AY    ++N LC   +L  A +L   MI  GL 
Sbjct: 415 EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLK 474

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P+I+ Y T++ G  K G  E A+++   MK     P++  YN++I G CK   ++  KS 
Sbjct: 475 PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSY 534

Query: 522 L----------------------------QASQR--IGLLDA------ITYNTLINGYFI 545
           L                            QA++R  I +LD+      +    LI+GY  
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +G   +AFA F  M + G+  +   +++LI+ L K G  Q+A  +   ++  G++PD  T
Sbjct: 595 DGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL--LGE 651
           YT+L++   K    +   ELHDDM   G++P+  TYNA+I+ L  LGE
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE 702



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 174/347 (50%), Gaps = 6/347 (1%)

Query: 146 PAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF   +L+    + G  + A+++   +  KG + +I  +N  ++ L KL EI +  +L
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  +   G   N  T++ +I   CK   L EA  L++ M   G+ P+   +  +I+  C+
Sbjct: 710 FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCK 769

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G+ E AL LF  M V  G +  P     N +I+GF KLG++  A ++   M+   I  N
Sbjct: 770 AGNTEKALSLFLGM-VEEGIASTP---AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPN 825

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY  LI+ +   G+ +EA +L  EM KR +MPN + Y S +H     G       +  
Sbjct: 826 HVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFD 885

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M+ + I PD   +S++     + G   +A KL + +L E +      Y ILI+ LCK N
Sbjct: 886 EMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHN 945

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           NL+   ++L  +  +G    + T GTL+  + + G  + A++V E+M
Sbjct: 946 NLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 42/86 (48%)

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LIN  C+ G  ++ + ++  M   G IP+ VTY+ ++    +    +E +EL   M 
Sbjct: 235 YTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMA 294

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G+ PDN  Y  +I     +K + +
Sbjct: 295 NKGLLPDNYIYATLIDGFCRQKRSTE 320


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 185/658 (28%), Positives = 335/658 (50%), Gaps = 16/658 (2%)

Query: 2   FSAFCNCLYKSNSPLSRAFHVGKQF-------ANPSTEDIVFRAICVNLRQRKWKILEQM 54
           FS F   L  S   L R  H+ +         ++P+  ++V R IC  +  R+   + ++
Sbjct: 5   FSIFTPPL-PSRLHLRRPIHLSRTLLWKLRDESHPAPPELVSR-ICRLVLLRRCNAISKL 62

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
               ++ +V+ V+   R +P  +L F+ +V +   F  +++S C +VH+L   R +D+  
Sbjct: 63  NFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETR 122

Query: 115 LLMGNLMSANSVSPLE--FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
             +  L+             + L+  Y     +P VFD +++   + G T+ A  V   +
Sbjct: 123 AYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNM 182

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
              G   S+ + N+ L++LVK  E      +Y++M+  G V +V   ++++ A CK+ K+
Sbjct: 183 GKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKV 242

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +EA     +M   G+ PN+V ++ +IN    +GD+E A  + +    MS   V  N VT+
Sbjct: 243 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLK---FMSEKGVSRNVVTY 299

Query: 293 NCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
             +I G+CK  +++ AE++   M  +A +  + R Y  LIDGY R G  ++A+RL DEM+
Sbjct: 300 TLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML 359

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + GL  N  + NS I+     G++  A  V++ M+D ++ PD ++Y+ L  G CR G   
Sbjct: 360 RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTS 419

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF L +++L+E +     +YN L+  LC+      A Q+   M+  G+ PD + Y TL+
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLL 479

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG  K  N EGA  +++++       + + +N++I+GLCK   +  A+ +    + +G  
Sbjct: 480 DGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITY TLI+GY     + +AF +   M    I+ +   YN LI+ L K     +  +L
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDL 599

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  M + G+ P+ VTY  L+  + K    ++    + +M  +G+S +    + ++S L
Sbjct: 600 LTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 265/574 (46%), Gaps = 74/574 (12%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF    +V A  + G  + A   ++K++  G   +I  +++ ++  V L ++     +
Sbjct: 224 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 283

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEAC 262
            K M   G   NV T+ L+I   CK+CK++EA  +   M + + + P+   + ++I+  C
Sbjct: 284 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 343

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G ++ A++L  +M  +    +  N    N +ING+CK G +  AE +   M+   +  
Sbjct: 344 RTGKIDDAVRLLDEMLRLG---LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  +Y TL+DGY R G + EA  LCD+M++ G+ P  + YN+ +  L   G  + AL + 
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+   + PD   YS L  GL +    + A  L   +L         ++N +I+ LCK 
Sbjct: 461 HLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK---------- 492
             +  A+++   M   G  PD ITY TLIDGYCK  N+  A +V   M++          
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMY 580

Query: 493 -------------VEKK------------PNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
                        VE              PN+V Y ++I+G CK+  LD A S       
Sbjct: 581 NSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 640

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI---------------AVNKVG- 570
            GL  + I  +T+++G +  G+I EA  +  +M + G                A+ K+  
Sbjct: 641 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIAD 700

Query: 571 ----------------YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
                           YNI I  LCK G    AR    ++ L G +PD  TY TL+  +S
Sbjct: 701 SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYS 760

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              + +E   L D+M+  G+ P+  TYNA+I+ L
Sbjct: 761 AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 259/517 (50%), Gaps = 13/517 (2%)

Query: 99  AIVHLLVNWRRFDDA----LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
            ++  +V+W    D+     LL G     ++       + +L   E  + T   ++ L++
Sbjct: 388 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ--EGIEPTVLTYNTLLK 445

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
              ++GA + A  +   +   G +     ++  L  L K+        L+K++++ G+ +
Sbjct: 446 GLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +  TFN +I  LCK  K+ EA  ++ +M   G  P+ + +  +I+  C+  ++  A   F
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA---F 562

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           +  G M  + + P+   +N +I+G  K  R+    ++   M   G+  N+ TY  LIDG+
Sbjct: 563 KVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGW 622

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  ++A     EM + GL  N ++ ++ +  L+  G ++ A  ++  M+D    PDH
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
                  K   R   +++     ++  +  ++ +   YNI I  LCK+  +  A++  S 
Sbjct: 683 ---ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           + ++G +PD  TY TLI GY   GN++ A ++ + M +    PN+V YN++INGLCK  +
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A+ L     + GL  + +TYNTLI+GY   G +  AF +  +M   GI+ + V Y+ 
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           LIN LCK G  +++ +L+  MI  G+    + Y TLV
Sbjct: 860 LINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 253/541 (46%), Gaps = 24/541 (4%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           + DDA+ L+  ++     + L     L++ Y  CK              +I   EG    
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGY--CKRG------------EIHEAEGVITR 392

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +    +K  S   +++N  L    +       + L  +M+  G    V T+N ++  LC+
Sbjct: 393 MVDWNLKPDS---YSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
               ++AL +++ M+K G+ P+ V ++ +++   ++ + E A  L++ +          +
Sbjct: 450 VGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI---LARGFTKS 506

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            +T N +I+G CK+G++  AEEI   M   G   +  TY TLIDGY +  +  +A ++  
Sbjct: 507 RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 566

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M +  + P+  +YNS I  LF    +     +L++M  + + P+  TY  L  G C+ G
Sbjct: 567 AMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 626

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + +AF  + ++ E  +  +    + +++ L +   +  A  L+  M+  G  PD   + 
Sbjct: 627 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HE 683

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             +    +   I+      +   K    PN ++YN  I GLCK   +D A+         
Sbjct: 684 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 743

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + D  TY TLI+GY   G + EAF +  EM   G+  N V YN LIN LCK     +A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
           + L   +   G+ P+ VTY TL+  + K  + +   +L D M+  G+SP   TY+A+I+ 
Sbjct: 804 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALING 863

Query: 648 L 648
           L
Sbjct: 864 L 864



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 180/365 (49%), Gaps = 42/365 (11%)

Query: 165 AYDVIQKLKVKGH------SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           A +V Q  KVKG       S SI  +N+ +S L K   +     L  EM   G   N+ T
Sbjct: 555 ASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVT 614

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM- 277
           +  +I   CKE  L++A S Y+ M ++G+  N++  + +++   ++G ++ A  L +KM 
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 278 --GVMS------------------GDSV--------LPNSVTHNCIINGFCKLGRVEFAE 309
             G                      DS+        LPN++ +N  I G CK G+V+ A 
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                +   G   +  TY TLI GY+  G+ +EA RL DEM++RGL+PN V YN+ I+ L
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               +V+ A  +   +  K + P+  TY+ L  G C+ G +  AFKL ++++EE +    
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +Y+ LIN LCK  ++  + +LL+ MI  G+   +I Y TL+ G  K  N       Y  
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN-------YNE 907

Query: 490 MKKVE 494
           M K E
Sbjct: 908 MSKPE 912


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/504 (34%), Positives = 276/504 (54%), Gaps = 12/504 (2%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R+  + G  E A+  +++L VKG    I  +N ++S L + + IG    ++  M   G
Sbjct: 22  LLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVFDGMRKHG 80

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +  N  T+N ++  LC   ++ +A +LY RM+K+G  P+VV +N +++  C+VG L+ AL
Sbjct: 81  FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEAL 140

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           K+F    V  G   +P+ VT+N +INGFCK  +++ A+ I   M+   +  +V TY +L+
Sbjct: 141 KIFDG-AVKRG--FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLV 197

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE-GDVEGALFVLSDMIDKHI 390
           +G  + G  +EA  L   +V +G  PN + Y++ I  L  E   +E A  +L  M+    
Sbjct: 198 NGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGC 254

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  +Y+ L  GL R   V +A KL   VL +    +  +YNILI+ L K + +  A +
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFE 314

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L S ++  GL PD ITY   IDG CK G +E A+ + ++M +    P++V +N++INGLC
Sbjct: 315 LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 374

Query: 511 KDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K+  +D A+ LL   +  G   +AI++NTLI G    GK  +A   F EM   G+    V
Sbjct: 375 KEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVV 434

Query: 570 GYNILINFLCKF---GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
            YNIL++ LCK    G  ++A  L   MI  G +PD VTY+ L+    K    ++   L 
Sbjct: 435 TYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLL 494

Query: 627 DDMVLSGVSPDNQTYNAIISPLLG 650
             M   G  P+  TYN++IS L G
Sbjct: 495 GAMEAKGCIPNVYTYNSLISGLCG 518



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/371 (31%), Positives = 197/371 (53%), Gaps = 6/371 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C ++   E A  +++K+ + G    I ++N  +  L +   +    KL+  ++  GY   
Sbjct: 233 CRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPE 292

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T+N++I  L KE ++ EA  L+  ++K G+ P+ + + + I+  C+ G +E AL + +
Sbjct: 293 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 352

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            M        +P+ V+HN +ING CK  RV+ AE +   M   G   N  ++ TLI G  
Sbjct: 353 DM---DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 409

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL---FAEGDVEGALFVLSDMIDKHICP 392
           R G  ++A+    EM+KRG+ P  V YN  +  L     EG ++ A+ +   MI+K   P
Sbjct: 410 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 469

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TYS L  GL + G +  A +L   +  +  + + Y+YN LI+ LC  + +  A +L 
Sbjct: 470 DVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELF 529

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
            +M+ +G +PD ITYGT+I   CK   ++ A+ +++   +    P   +Y S+I+GLC  
Sbjct: 530 VAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAV 589

Query: 513 ASLDAAKSLLQ 523
           A +D A  LLQ
Sbjct: 590 ARVDEALKLLQ 600



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 229/449 (51%), Gaps = 11/449 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++AL+    +    + A  ++Q++  +     +  +N+ ++ L K    GR  +    +V
Sbjct: 158 YNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCK---NGRVDEARMLIV 214

Query: 209 SCGYVENVNTFNLVIYALCKECK-LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
             G+  NV T++ +I  LC+E + LE A  L  +M+ +G  P++V +N +I+   +   +
Sbjct: 215 DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGV 274

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             ALKLF   G +      P   T+N +I+G  K  RV  A E+   ++K G++ +  TY
Sbjct: 275 SEALKLF---GSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 331

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
              IDG  + G  E+AL +  +M ++G +P+ V +N+ I+ L  E  V+ A  +LS M  
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 391

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  +++ L  G CR G  K+A     ++L+  +     +YNIL++ LCK+     
Sbjct: 392 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 451

Query: 448 AKQ---LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
            K+   L  +MI +G +PD++TY  LIDG  K G ++ A ++   M+     PN+  YNS
Sbjct: 452 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 511

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+GLC    +D A  L  A    G + D ITY T+I+       + +A A+F      G
Sbjct: 512 LISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAG 571

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMK 592
           +      Y  LI+ LC      +A +L++
Sbjct: 572 VVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 193/374 (51%), Gaps = 10/374 (2%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P++ T   ++    K G++E A      ++  G+ C++ T+   I G  R     +A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTV 72

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D M K G  PN + YN+ +  L   G +  A  +   MI     PD  TY+ L  G C+
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G + +A K+ +  ++   V D  +YN LIN  CK++ L  A+++L  M+   L+PD++T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIINGLCKD-ASLDAAKSLLQ 523
           Y +L++G CK G ++ A      M  V+K   PN++ Y+++I+GLC++   L++A+ LL+
Sbjct: 193 YNSLVNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLE 247

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G   D ++YN LI+G      ++EA  +F  +   G       YNILI+ L K  
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A EL   ++ HG+ PD +TYT  +    K    E+ + +  DM   G  PD  ++N
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367

Query: 643 AIISPLLGEKSAED 656
           A+I+ L  EK  ++
Sbjct: 368 AVINGLCKEKRVDE 381



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 38/231 (16%)

Query: 456 IVRGLIPDIITYGTL----------------------------------IDGYCKGGNIE 481
           +VR   PD  T G L                                  I G C+   I 
Sbjct: 8   LVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIG 67

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A  V++ M+K    PN + YN++++GLC    +  A++L +   + G   D +TYNTL+
Sbjct: 68  DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL 127

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G+   GK+ EA  +F      G   + V YN LIN  CK     +A+ +++ M+   ++
Sbjct: 128 HGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           PD VTY +LV    KN   +E   L   +V  G SP+  TY+ +IS L  E
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRE 235


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/621 (28%), Positives = 320/621 (51%), Gaps = 7/621 (1%)

Query: 32  EDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFS 91
           + +    IC  +  R+   + ++    ++ +V+ V+   R +P  +L F+ +V +   F 
Sbjct: 6   QPLAISRICRLVLLRRCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFR 65

Query: 92  HSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE--FLEGLLDSYEICKATPAVF 149
            +++S C +VH+L   R +D+    +  L+             + L+  Y     +P VF
Sbjct: 66  PNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVF 125

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           D +++   + G T+ A  V   +   G   S+ + N+ L++LVK  E      +Y++M+ 
Sbjct: 126 DMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR 185

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V +V   ++++ A CK+ K++EA     +M   G+ PN+V ++ +IN    +GD+E 
Sbjct: 186 VGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEA 245

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYA 328
           A  + +    MS   V  N VT+  +I G+CK  +++ AE++   M  +A +  + R Y 
Sbjct: 246 AKGVLK---FMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LIDGY R G  ++A+RL DEM++ GL  N  + NS I+     G++  A  V++ M+D 
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           ++ PD ++Y+ L  G CR G   +AF L +++L+E +     +YN L+  LC+      A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            Q+   M+ RG+ PD + Y TL+DG  K  N EGA  +++++       + + +N++I+G
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 482

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK   +  A+ +    + +G   D ITY TLI+GY     + +AF +   M    I+ +
Sbjct: 483 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPS 542

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              YN LI+ L K     +  +L+  M + G+ P+ VTY  L+  + K    ++    + 
Sbjct: 543 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 602

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           +M  +G+S +    + ++S L
Sbjct: 603 EMTENGLSANIIICSTMVSGL 623



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 261/515 (50%), Gaps = 10/515 (1%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF    +V A  + G  + A   ++K++  G   +I  +++ ++  V L ++     +
Sbjct: 190 PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGV 249

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEAC 262
            K M   G   NV T+ L+I   CK+CK++EA  +   M + + + P+   + ++I+  C
Sbjct: 250 LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYC 309

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G ++ A++L  +M  +    +  N    N +ING+CK G +  AE +   M+   +  
Sbjct: 310 RTGKIDDAVRLLDEMLRLG---LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 366

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  +Y TL+DGY R G + EA  LCD+M++ G+ P  + YN+ +  L   G  + AL + 
Sbjct: 367 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 426

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ + + PD   YS L  GL +    + A  L   +L         ++N +I+ LCK 
Sbjct: 427 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 486

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A+++   M   G  PD ITY TLIDGYCK  N+  A +V   M++    P++ +Y
Sbjct: 487 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 546

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I+GL K   L     LL      GL  + +TY  LI+G+   G + +AF+ + EM  
Sbjct: 547 NSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 606

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G++ N +  + +++ L + G   +A  LM+ M+ HG  PD+  +     R++   + ++
Sbjct: 607 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA---AIQK 663

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + +  D+   + + P+N  YN  I+ L      +D
Sbjct: 664 IADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 698



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/532 (26%), Positives = 246/532 (46%), Gaps = 24/532 (4%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           + DDA+ L+  ++     + L     L++ Y  CK              +I   EG    
Sbjct: 313 KIDDAVRLLDEMLRLGLKTNLFICNSLINGY--CKRG------------EIHEAEGVITR 358

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +    +K  S   +++N  L    +       + L  +M+  G    V T+N ++  LC+
Sbjct: 359 MVDWNLKPDS---YSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 415

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
               ++AL +++ M+K G+ P+ V ++ +++   ++ + E A  L++ +          +
Sbjct: 416 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI---LARGFTKS 472

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            +T N +I+G CK+G++  AEEI   M   G   +  TY TLIDGY +  +  +A ++  
Sbjct: 473 RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKG 532

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M +  + P+  +YNS I  LF    +     +L++M  + + P+  TY  L  G C+ G
Sbjct: 533 AMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEG 592

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + +AF  + ++ E  +  +    + +++ L +   +  A  L+  M+  G  PD   + 
Sbjct: 593 MLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HE 649

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             +    +   I+      +   K    PN ++YN  I GLCK   +D A+         
Sbjct: 650 CFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLK 709

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + D  TY TLI+GY   G + EAF +  EM   G+  N V YN LIN LCK     +A
Sbjct: 710 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 769

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           + L   +   G+ P+ VTY TL+  + K  + +   +L D M+  G+SP  Q
Sbjct: 770 QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQ 821



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 222/477 (46%), Gaps = 41/477 (8%)

Query: 99  AIVHLLVNWRRFDDA----LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
            ++  +V+W    D+     LL G     ++       + +L   E  + T   ++ L++
Sbjct: 354 GVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ--EGIEPTVLTYNTLLK 411

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
              ++GA + A  +   +  +G +     ++  L  L K+        L+K++++ G+ +
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 471

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +  TFN +I  LCK  K+ EA  ++ +M   G  P+ + +  +I+  C+  ++  A   F
Sbjct: 472 SRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQA---F 528

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           +  G M  + + P+   +N +I+G  K  R+    ++   M   G+  N+ TY  LIDG+
Sbjct: 529 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 588

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  ++A     EM + GL  N ++ ++ +  L+  G ++ A  ++  M+D    PDH
Sbjct: 589 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 648

Query: 395 --------------------------------FTYSILTKGLCRNGCVKQAFKLHNQVLE 422
                                             Y+I   GLC+ G V  A +  + +  
Sbjct: 649 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 708

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           +  V D ++Y  LI+    + N+  A +L   M+ RGL+P+I+TY  LI+G CK  N++ 
Sbjct: 709 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 768

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
           A +++  + +    PN+V YN++I+G CK  ++DAA  L       G+  +I  N L
Sbjct: 769 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQCNLL 825


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 185/626 (29%), Positives = 315/626 (50%), Gaps = 59/626 (9%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM----SANSVSPLEFLEGLLDSYEI- 141
           +N F+ ++ S   ++H      R ++AL L+  ++      + VS    + GL    ++ 
Sbjct: 72  DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131

Query: 142 -------------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
                        C+     +  LV    ++G  +GA ++++K+  +G+  +   +NN +
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
             L    ++    +L+KEM   G    +V T++ ++ +L K  K+++A  L   M+  G 
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGC 251

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            PNVV ++ +++  C+ G L+ A  L ++M   SG S  PN VT+N II+G CKLGR++ 
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSGCS--PNIVTYNTIIDGHCKLGRIDE 308

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M+  G   NV TY  L+D + + G +E+A+ L + MV++G +PN   YNS + 
Sbjct: 309 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 368

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR----------------NGCVK 411
               + +VE A  +LS MI K   P+  +Y+ +  GLC+                N CV 
Sbjct: 369 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 428

Query: 412 Q-------------------AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
                               A++L N + E     +  +YN L++ LCKS     A+ LL
Sbjct: 429 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 488

Query: 453 SSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
             M  + G  PDIITY T+IDG CK   ++ A +++  M      P+ V Y+ +I+ LCK
Sbjct: 489 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              +D A ++L+   + G    AITY TLI+G+   G + +A  +   + + G   + V 
Sbjct: 549 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 608

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           ++I I++L K G  +QA EL++ M+  G++PD VTY TL+  F      E+ ++L + M 
Sbjct: 609 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMR 668

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G  PDN TY  ++  L+ +KS +D
Sbjct: 669 QCGCEPDNATYTTLVGHLVDKKSYKD 694



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/576 (27%), Positives = 285/576 (49%), Gaps = 70/576 (12%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           + C      ++ ++   ++    + A  +++++   G + ++ ++N  L    K N +  
Sbjct: 38  KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVEN 97

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L ++MV  G   +V ++  VI  LCK  +++EA  +  +M++ G  PNV+ +  +++
Sbjct: 98  ALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 157

Query: 260 EACQVGDLEFALKLFRKM-----------------GVMSG---DSVL------------- 286
             C+VGDL+ A++L RKM                 G+ SG   DS L             
Sbjct: 158 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCP 217

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+  T++ I++   K G+V+ A  +  AM+  G   NV TY++L+ G  + G  +EA  L
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M + G  PN V YN+ I      G ++ A  +L +M+D    P+  TY++L    C+
Sbjct: 278 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK 337

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G  + A  L   ++E+  V + ++YN L++  CK + +  A QLLSSMI +G +P++++
Sbjct: 338 CGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397

Query: 467 YGTLIDGYCKGGNIEGAVQVYENM-----------------------------------K 491
           Y T+I G CK   +   V + E M                                   +
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG--LLDAITYNTLINGYFINGKI 549
           +    PNLV YNS+++GLCK    D A+ LL+   R      D ITYNT+I+G   + ++
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             A+ +F +M + G+A + V Y+I+I+ LCK+    +A  ++++M+ +G  P  +TY TL
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 577

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +  F K  + ++ +E+   ++  G  PD  T++  I
Sbjct: 578 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 613



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 257/521 (49%), Gaps = 25/521 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEF-----LEGLLDSYEI------------- 141
           I+H L + R+ D AL L   +  + S  P  F     ++ L+ S ++             
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249

Query: 142 -CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
            C      + +L+    + G  + A  ++Q++   G S +I  +N  +    KL  I   
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + L +EMV  G   NV T+ +++ A CK  K E+A+ L   M++ G  PN+  +N +++ 
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+  ++E A +L   M +  G   +PN V++N +I G CK  +V     +   M+    
Sbjct: 370 FCKKDEVERACQLLSSM-IQKG--CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNC 426

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             ++ T+ T+ID   +    + A  L + + + G  PN V YNS +H L      + A +
Sbjct: 427 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486

Query: 381 VLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
           +L +M  K  C PD  TY+ +  GLC++  V +A+KL  Q+L + +  D  +Y+I+I+ L
Sbjct: 487 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   +  A  +L  M+  G  P  ITYGTLIDG+CK GN++ A+++ + +      P++
Sbjct: 547 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V ++  I+ L K   L  A  LL+   R GL+ D +TYNTL+ G+    +  +A  +F  
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEV 666

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQ-ARELMKVMILHG 598
           MR  G   +   Y  L+  L     Y+    E+ K M+  G
Sbjct: 667 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTG 707



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/409 (33%), Positives = 212/409 (51%), Gaps = 6/409 (1%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M + G+  +      I+   C  G    A+  FR+M      +  P+SVT+N +ING  K
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS----KTCPPDSVTYNTMINGLSK 56

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
             R++ A  +   M+  G   NV +Y T++ G+ +    E AL L ++MV RG  P+ V 
Sbjct: 57  SDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVS 116

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y + I+ L     V+ A  V+  MI +   P+  TY  L  G CR G +  A +L  ++ 
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 176

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG-LIPDIITYGTLIDGYCKGGNI 480
           E     +A +YN +++ LC    L +A QL   M   G   PD+ TY T++D   K G +
Sbjct: 177 ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
           + A ++ E M      PN+V Y+S+++GLCK   LD A +LLQ   R G   + +TYNT+
Sbjct: 237 DDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G+   G+I EA+ +  EM + G   N V Y +L++  CK G  + A  L++VM+  G 
Sbjct: 297 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +P+  TY +L+  F K    E   +L   M+  G  P+  +YN +I+ L
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 405



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 206/404 (50%), Gaps = 11/404 (2%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            LE ++D    C+     +  L+ A  + G  E A  +++ +  KG+  ++  +N+ L  
Sbjct: 312 LLEEMVDGG--CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
             K +E+ R  +L   M+  G V NV ++N VI  LCK  K+ E + L  +ML +   P+
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           +V FN II+  C+   ++ A +LF    ++      PN VT+N +++G CK  R + AE 
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFN---LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486

Query: 311 IRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           +   M  K G   ++ TY T+IDG  +    + A +L  +M+  GL P++V Y+  I  L
Sbjct: 487 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
                ++ A  VL  M+     P   TY  L  G C+ G + +A ++   +L +    D 
Sbjct: 547 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +++I I++L K   L  A +LL +M+  GL+PD +TY TL+ G+C     E AV ++E 
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEV 666

Query: 490 MKKVEKKPNLVIYNSIINGLC-----KDASLDAAKSLLQASQRI 528
           M++   +P+   Y +++  L      KD   + +KS++    ++
Sbjct: 667 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKL 710



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 184/346 (53%), Gaps = 3/346 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G+  +   + +++ G    G   +A+    EM K    P++V YN+ I+ L     
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A+ +L +M+D    P+ F+Y+ +  G C+   V+ A  L  Q++      D  SY  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +IN LCK + +  A +++  MI RG  P++ITYGTL+DG+C+ G+++GAV++   M +  
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEA 552
            +PN + YN+I++GLC    LD+A  L +  +  G    D  TY+T+++    +GK+ +A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +   M + G + N V Y+ L++ LCK G   +A  L++ M   G  P+ VTY T++  
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             K    +E   L ++MV  G  P+  TY  ++        AED +
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 345


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 267/496 (53%), Gaps = 5/496 (1%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           +++  + G    A  +++ + V G   +  A+   ++   +  +  R  +L+ EM+ C  
Sbjct: 232 IKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCL 291

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             +V TFN +++ALCK+  + E+  L+ ++LK G+ PN+  FN+ I   C+ G L+ A++
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           L   +G +S + + P+ VT+N +I G C+  RV  AEE  + M+  G + N  TY ++ID
Sbjct: 352 L---LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GY + G   +A R+  + V +G  P+   Y S ++    +GD + A+ V  D + K + P
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
               Y+ L KGLC+ G +  A +L N++ E+    D ++YN++IN LCK   L+ A  L+
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
              I +G IPDI TY TL+DGYC+   ++ A+++   M      P+++ YN+++NGLCK 
Sbjct: 529 GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKT 588

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           A  +    + +A    G   + ITYNT+I     + K+ EA  +  EM++ G+  + V +
Sbjct: 589 AKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648

Query: 572 NILINFLCKFGCYQQARELMKVM-ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
             LI   CK G    A  L + M   + +     TY  +++ FS+  + +  + L  +M 
Sbjct: 649 GTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMK 708

Query: 631 LSGVSPDNQTYNAIIS 646
            +G  PDN TY  +I 
Sbjct: 709 KNGCDPDNYTYRVLID 724



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 241/493 (48%), Gaps = 10/493 (2%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLV---KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           +I+K K +G   ++  + + L  L    K NE+       +  +    +E V    +  Y
Sbjct: 107 LIKKTK-QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFY 165

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
              ++ K++EA+  + RM      P+V  +N I+N   + G    A K++ +M       
Sbjct: 166 G--RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM---KDKK 220

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V  +  T+   I  FC+ GR   A  +   M   G   N   Y T++ G+   G ++ A 
Sbjct: 221 VESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRAR 280

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L DEM++  L P+   +N  +H L  +G V  +  +   ++ + +CP+ FT++I  +GL
Sbjct: 281 ELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGL 340

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G + +A +L   V  E +  D  +YN +I  LC+ + +  A++ L  M+  G  P+ 
Sbjct: 341 CKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND 400

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY ++IDGYCK G +  A ++ ++      KP+   Y S++NG C+D   D A ++ + 
Sbjct: 401 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460

Query: 525 SQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               GL  + I YNTLI G    G I  A  + +EM   G   +   YN++IN LCK GC
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
              A  L+   I  G IPD  TY TLV  + +    +  IEL + M   G++PD  TYN 
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNT 580

Query: 644 IISPLLGEKSAED 656
           +++ L     +E+
Sbjct: 581 LLNGLCKTAKSEE 593



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 245/501 (48%), Gaps = 4/501 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            V+   +R   + G  + A D  +++ +     S++++N  ++ LV+     +  K+Y  
Sbjct: 156 GVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMR 215

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V T+ + I + C+  +   AL L   M   G + N V +  ++    + GD
Sbjct: 216 MKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGD 275

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + A +LF +M       + P+  T N +++  CK G V  +E +   ++K G+  N+ T
Sbjct: 276 NDRARELFDEMLECC---LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFT 332

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +   I G  + GS + A+RL   + + GL P+ V YN+ I  L  +  V  A   L  M+
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +    P+ FTY+ +  G C+ G V  A ++    + +    D ++Y  L+N  C+  +  
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +    + +GL P II Y TLI G C+ G I  A+Q+   M +   KP++  YN II
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLCK   L  A  L+  +   G + D  TYNTL++GY    K+  A  + + M + G+ 
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + + YN L+N LCK    ++  E+ K M   G  P+ +TY T++     +    E ++L
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632

Query: 626 HDDMVLSGVSPDNQTYNAIIS 646
             +M   G++PD  ++  +I+
Sbjct: 633 LGEMKSKGLTPDVVSFGTLIT 653



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 241/516 (46%), Gaps = 9/516 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L D    C   P V  F+ LV A  + G    +  +  K+  +G   ++  +N F+  L 
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K   + R  +L   +   G   +V T+N VI  LC++ ++ EA    ++M+  G  PN  
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N II+  C+ G +  A ++  K  V  G    P+  T+  ++NGFC+ G  + A  + 
Sbjct: 402 TYNSIIDGYCKKGMVVDANRIL-KDAVFKG--FKPDEFTYCSLVNGFCQDGDPDQAMAVF 458

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
              +  G+  ++  Y TLI G  + G    AL+L +EM ++G  P+   YN  I+ L   
Sbjct: 459 KDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKM 518

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G +  A  ++ D I K   PD FTY+ L  G CR   +  A +L N++  + M  D  +Y
Sbjct: 519 GCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITY 578

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N L+N LCK+       ++  +M  +G  P+IITY T+I+  C    +  AV +   MK 
Sbjct: 579 NTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKS 638

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD--AITYNTLINGYFINGKIA 550
               P++V + ++I G CK   LD A  L +  ++   +     TYN +I+ +     + 
Sbjct: 639 KGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMK 698

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A  +FSEM+  G   +   Y +LI+  CK G   Q  + +   I  G IP   T+  ++
Sbjct: 699 MALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVL 758

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
                    +E + +   MV   + PD  T N I  
Sbjct: 759 NCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFE 792


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 186/625 (29%), Positives = 315/625 (50%), Gaps = 20/625 (3%)

Query: 9   LYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVS 68
           +Y+ +  LS +       + P +  I        ++  +W  ++ +AP+LT SL++  + 
Sbjct: 12  IYRHSKTLSNSSLYTTTTSAPPSPPITETKFLEYIQTSQWHFIKHLAPNLTPSLLSSTLP 71

Query: 69  EFRKSPKLALEFYTWVGENNRFSHSLE--SSCAIVHLLVNWRRFDDALLLMGNLMSANSV 126
              ++P L     T +   +R  H L+  + C  + +L        +  ++  ++   + 
Sbjct: 72  TLHQNPILV---ETLLSHLHRHPHCLDLNTRCITLCILYRLPSPKPSFHILQPILHTTTP 128

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           + + F E  L    +   T  VFD L+ A  Q    + A + +  +K           N+
Sbjct: 129 TVI-FNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNS 187

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            LS L+KLN+I   W +Y+EMV      ++ TFN++I  LC+E K ++A      M   G
Sbjct: 188 LLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYG 247

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PNVV +N +IN  C  G  E A K+F+    M   ++ P+  T+N  I+  CK  R+E
Sbjct: 248 VKPNVVTYNTVINGYCLRGKFEAASKIFK---TMKDKNLKPDCYTYNSFISRLCKERRIE 304

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A  +   ++++G+  N  TY  LIDG    G  ++A    DEM+ RG++ +   YN  I
Sbjct: 305 EASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLI 364

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           H LF E  +E A  ++ +M +K + PD  TY+I   G CR G  K+A  L ++++E+++ 
Sbjct: 365 HALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIR 424

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
               +Y  LI+   K N ++ A++     I  G++PDII +  LIDG+C  GNI+ A Q+
Sbjct: 425 PTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQL 484

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
            + M   +  P+ V +N+++ G C++  ++ AK LL   +  G+  D I+YNTLI+GY  
Sbjct: 485 LKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSK 544

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G + +A  +F EM ++G     + YN LI    K G    A EL++ M   GI PD  T
Sbjct: 545 RGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDST 604

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  ++          E ++ +DD+V
Sbjct: 605 YLYVI----------EAMKTNDDLV 619



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 235/435 (54%), Gaps = 4/435 (0%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V+    F+L++ A C+  K +EAL     M ++ I P     N +++   ++  ++ A  
Sbjct: 144 VKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWF 203

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           ++ +M  M+  S +   VT N +IN  C+ G+ + A++    M   G+  NV TY T+I+
Sbjct: 204 VYEEMVKMNIKSSI---VTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GY   G  E A ++   M  + L P+   YNS I  L  E  +E A  VL  +++  + P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  TY+ L  G C  G + +AF   ++++   +V   ++YN+LI+ L     +  A+ ++
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M  +G+ PD++TY   I+GYC+ GN + A+ +++ M +   +P +  Y S+I+   K 
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  A+   + S + G+L D I +N LI+G+ +NG I  AF +  EM N  +  ++V +
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N L+   C+    ++A++L+  M   GI PD+++Y TL++ +SK    ++ +E+ D+M+ 
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLS 560

Query: 632 SGVSPDNQTYNAIIS 646
            G  P   TYNA+I 
Sbjct: 561 LGFDPTLLTYNALIQ 575



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 1/226 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +++L++  C+      A + L+ M    +IP   T  +L+    K   I+ A  VYE M 
Sbjct: 150 FDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMV 209

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           K+  K ++V +N +IN LC++     AK  +   +  G+  + +TYNT+INGY + GK  
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A  +F  M++  +  +   YN  I+ LCK    ++A  ++  ++  G++P+ VTY  L+
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                    ++     D+M+  G+     TYN +I  L  EK  E+
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEE 375


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/643 (26%), Positives = 322/643 (50%), Gaps = 36/643 (5%)

Query: 27  ANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGE 86
           ++PS   +  +A+   L++  ++ L  ++ + T    + ++ + + + +L L+F TW   
Sbjct: 17  SSPSDSLLADKALTF-LKRHPYQ-LHHLSANFTPEAASNLLLKSQNNQELILKFLTWANP 74

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA---NSVSPLEFLEGLLDSYEICK 143
           +  F+  L   C  +H+L  ++ +  A  L  ++ +    +  + L F   L ++Y++C 
Sbjct: 75  HQFFT--LRCKCITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVF-RSLQETYDLCN 131

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK- 202
           +T +VFD +V++ +++   + A  ++   +  G    + ++N  L   ++      F + 
Sbjct: 132 STSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++KEM+      NV T+N++I   C    L+ AL  + RM K G  PNVV +N +I+  C
Sbjct: 192 VFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  ++   +L R M +     + PN +++N +ING C+ GR++    +   M K G   
Sbjct: 252 KLRKIDDGFELLRSMAL---KGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY TLI GY + G+  +AL +  EM++ GL P+ + Y S IH +   G++  A   L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M  + +CP+  TY+ L  G  + G + +A+++  ++++        +YN LIN  C +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  +L  M  +GL PD+++Y T++ G+C+  +++ A++V   M     KP+ + Y
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +S+I G C+      A  L     R+GL  D  TY  LIN Y + G + +A  + +EM  
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE 548

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP-- 619
            G+  + V Y++LIN L K    ++A+ L+  +     +P  VTY TL+    +NCS   
Sbjct: 549 KGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI----ENCSNIE 604

Query: 620 -----------------EEVIELHDDMVLSGVSPDNQTYNAII 645
                             E  ++ + M+     PD   YN +I
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMI 647



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 233/434 (53%), Gaps = 5/434 (1%)

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG-DLEFALKLFR 275
           + F+LV+ +  + C +++ALS+ +     G  P V+ +N +++   +   ++ FA  +F+
Sbjct: 135 SVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M       V PN  T+N +I GFC  G ++ A      M K G   NV TY TLIDGY 
Sbjct: 195 EM---LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           +    ++   L   M  +GL PN + YN  I+ L  EG ++   FVL++M  +    D  
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY+ L KG C+ G   QA  +H ++L   +     +Y  LI+ +CK+ N+  A + L  M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
            VRGL P+  TY TL+DG+ + G +  A +V + M      P++V YN++ING C    +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKM 431

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
             A ++L+  +  GL  D ++Y+T+++G+  +  + EA  +  +M   GI  + + Y+ L
Sbjct: 432 VDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSL 491

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I   C+    ++A +L   M+  G+ PD  TYT L+  +      ++ I+LH++MV  GV
Sbjct: 492 IQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGV 551

Query: 635 SPDNQTYNAIISPL 648
            PD  TY+ +I+ L
Sbjct: 552 LPDVVTYSVLINGL 565



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 194/398 (48%), Gaps = 3/398 (0%)

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           A +  D E A  +FR +   + D     S   + ++  + +L  ++ A  I +     G 
Sbjct: 107 AAKTLDDEDASLVFRSLQ-ETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGF 165

Query: 321 DCNVRTYATLIDGYARGGSS-EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              V +Y  ++D   R   +   A  +  EM++  + PN   YN  I      G+++ AL
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVAL 225

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M  K   P+  TY+ L  G C+   +   F+L   +  + +  +  SYN++IN L
Sbjct: 226 RFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGL 285

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C+   +     +L+ M  RG   D +TY TLI GYCK GN   A+ ++  M +    P++
Sbjct: 286 CREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSV 345

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y S+I+ +CK  +++ A   L   +  GL  +  TY TL++G+   G + EA+ +  E
Sbjct: 346 ITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKE 405

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G + + V YN LIN  C  G    A  +++ M   G+ PD V+Y+T+++ F ++  
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYD 465

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E + +   MV  G+ PD  TY+++I     ++  ++
Sbjct: 466 VDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKE 503



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/539 (22%), Positives = 234/539 (43%), Gaps = 106/539 (19%)

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
           +L+ G  ++ N    L F + +    + C      ++ L+    ++   +  +++++ + 
Sbjct: 210 ILIRGFCLAGNLDVALRFFDRM--EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA 267

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           +KG   ++ ++N  ++ L +   +     +  EM   GY  +  T+N +I   CKE    
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFH 327

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV-------------- 279
           +AL ++  ML+ G+ P+V+ +  +I+  C+ G++  A +   +M V              
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLV 387

Query: 280 ------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
                             M  +   P+ VT+N +ING C  G++  A  +   M + G+ 
Sbjct: 388 DGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLT 447

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V +Y+T++ G+ R    +EALR+  +MV +G+ P+ + Y+S I     +   + A  +
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + PD FTY+ L    C  G +++A +LHN+++E+ ++ D  +Y++LIN L K
Sbjct: 508 FDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLID----------------------------- 472
                 AK+LL  +     +P  +TY TLI+                             
Sbjct: 568 QARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627

Query: 473 ---------------------GYCKGGNIEGAVQVYENM----------------KKVEK 495
                                G+C+GG+I  A  +Y+ M                K + K
Sbjct: 628 FESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHK 687

Query: 496 KPNLVIYNSIINGL---CKDASLDAAKSLLQASQRIGLLDA---ITYNTLINGYFINGK 548
           +  +   NS+I  +   C+ +  + AK L++ + R G +D    +      +G+  NGK
Sbjct: 688 EGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGK 746


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 189/633 (29%), Positives = 306/633 (48%), Gaps = 45/633 (7%)

Query: 56  PSLTNSLVNRVVSE--FRKSPKLALEFYTWVGEN-NRFSHSLESSCAIVHLLV-NWRRFD 111
           P LT  LV  ++S       P + + F+ W   N   F H+   S   +   + + R+F 
Sbjct: 46  PQLTPPLVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFS 105

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DA  L+   ++ +    L      L    +   + A+ D  + A  Q G    A+ + +K
Sbjct: 106 DAKSLLLGFIATDRRHDLH-----LSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKK 160

Query: 172 LKVKGHSVSIHAWNNFLSHLVKL---NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +K      ++   N  L+ LV+    + +    + + + +  G V NVNTFN+VIY  C 
Sbjct: 161 MKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR------------- 275
           E K ++A+     M K    P+ V +N I++  C+ G L  A  L               
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNT 280

Query: 276 ---------KMG----------VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
                    KMG          +M+ +++LP+  T+N +ING C  GR+E A ++R  M 
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
              +  +V +Y TLI+G        EA +L +EM ++G+ PN V +N  + W   EG ++
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A   ++ M +    PD  TY+ L  G C+ G + +AF+  +++  ++M  D+ + N ++
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LC+   L  A +LLSS   RG   D ++YGTLI GY K GN++ A+++++ MK+ E  
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAM 555
           P+ V YN II GLC+    + A S L      GLL D  TYNT+++GY   G + +AF  
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            ++M       +    NIL+  LC  G  ++A +L    +  G   D VTY TL+T   K
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               ++   L  +M    + PD+ TYNAII+ L
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 232/464 (50%), Gaps = 4/464 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++ A  + G    A D++  +K +G   + + +N  +    K+  +    
Sbjct: 239 CSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            + + M     + +V T+N++I  LC E ++EEA  L   M    + P+VV +N +IN  
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC 358

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            +   +  A KL  +M   S   V PN+VTHN ++  +CK G+++ A      M ++G  
Sbjct: 359 LEWSKISEAFKLLEEM---SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY TLI+GY + G+  EA R  DEM ++ +  ++V  N+ +  L  E  +E A  +
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           LS    +    D  +Y  L  G  ++G V +A KL +++ E+ ++    +YN +I  LC+
Sbjct: 476 LSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQ 535

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A   L+ ++  GL+PD  TY T++ GYC+ G++E A Q +  M +   KP++  
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT 595

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            N ++ GLC +  L+ A  L       G  +D +TYNTLI      G++ +AF + SEM 
Sbjct: 596 CNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEME 655

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
              +  +   YN +I  L   G  ++A E M  M+  G +P  V
Sbjct: 656 EKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 227/460 (49%), Gaps = 33/460 (7%)

Query: 148 VFDALVRACTQIGATEGAY---DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
            ++ L+      G  E A+   D ++ LK+    VS   +N  ++  ++ ++I   +KL 
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS---YNTLINGCLEWSKISEAFKLL 371

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           +EM   G   N  T N+++   CKE K+++A +   +M +SG  P+ V +N +IN  C+ 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G++  A   FR M  M   ++  +SVT N I+   C+  ++E A ++  +  K G   + 
Sbjct: 432 GNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            +Y TLI GY + G+ + AL+L DEM ++ ++P+ V YN  I  L   G  E A+  L++
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           +++  + PD  TY+ +  G CR G V++AF+ HN+++E     D ++ NIL+  LC    
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGM 608

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A +L ++ + +G   D +TY TLI   CK G ++ A  +   M++ E  P+   YN+
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLD------------------------AITYNTLI 540
           II  L     +  A+  +      G L                         ++ Y+  I
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWI 728

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                 GK  +A  +F E +  GI V+K  Y  L++ L K
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 228/475 (48%), Gaps = 48/475 (10%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD---LEFALKLFR 275
            +  I A  +  +   A  ++ +M +  + PN++  N ++N   +      + F+ + F 
Sbjct: 138 LDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFN 197

Query: 276 ---KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
              K+G+      +PN  T N +I G+C   + + A E    M K     +  TY T++D
Sbjct: 198 DAIKLGI------VPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              + G   +A  L  +M  RGL+PN   YN  ++     G ++ A  V+  M   ++ P
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D +TY++L  GLC  G +++AFKL +++    ++ D  SYN LIN   + + ++ A +LL
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING---- 508
             M  +G+ P+ +T+  ++  YCK G ++ A      M++    P+ V YN++ING    
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 509 -------------------------------LCKDASLDAAKSLLQASQRIG-LLDAITY 536
                                          LC++  L+ A  LL ++++ G  +D ++Y
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            TLI GYF +G +  A  ++ EM+   I  + V YN +I  LC+ G  +QA   +  ++ 
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            G++PD  TY T++  + +    E+  + H+ MV +   PD  T N ++  L  E
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCME 606



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 164/333 (49%), Gaps = 6/333 (1%)

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHWLFAEGDVEGALFVLSD 384
           T I  Y + G    A ++  +M +  L PN    N + NS + +  +   V  +    +D
Sbjct: 140 TAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHS-VSFSREAFND 198

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            I   I P+  T++I+  G C     K A +  N + + +   D  +YN +++ LCK   
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGR 258

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A+ LL  M  RGL+P+  TY  L+ GYCK G ++ A  V E M +    P++  YN 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +INGLC +  ++ A  L    + + LL D ++YNTLING     KI+EAF +  EM   G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  N V +NI++ + CK G    A   +  M   G  PD VTY TL+  + K  +  E  
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              D+M    +  D+ T N I+  L  EK  E+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEE 471



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 26/322 (8%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K      + ++R   +    E AY ++   + +G+ +   ++   +    K   + R  K
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EM     + +  T+N +I  LC+  K E+A+S    +L+SG+ P+   +N I++  C
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + GD+E A +   K   M  +S  P+  T N ++ G C  G +E A ++    +  G   
Sbjct: 570 REGDVEKAFQFHNK---MVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAI 626

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY TLI    + G  ++A  L  EM ++ L P++  YN+ I  L   G +  A   +
Sbjct: 627 DTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFM 686

Query: 383 SDMIDKHICPDH-----------------------FTYSILTKGLCRNGCVKQAFKLHNQ 419
           S M++K   P                           YS   K LC  G  K A ++  +
Sbjct: 687 SKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGE 746

Query: 420 VLEEHMVGDAYSYNILINYLCK 441
             ++ +  D  +Y  L++ L K
Sbjct: 747 SKQKGITVDKSTYINLMDGLIK 768


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 189/633 (29%), Positives = 306/633 (48%), Gaps = 45/633 (7%)

Query: 56  PSLTNSLVNRVVSE--FRKSPKLALEFYTWVGEN-NRFSHSLESSCAIVHLLV-NWRRFD 111
           P LT  LV  ++S       P + + F+ W   N   F H+   S   +   + + R+F 
Sbjct: 46  PHLTPPLVLSILSSKTLISRPNILISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHRKFS 105

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DA  L+   ++ +    L      L    +   + A+ D  + A  Q G    A+ + +K
Sbjct: 106 DAKSLLLGFIATDRRHDLH-----LSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKK 160

Query: 172 LKVKGHSVSIHAWNNFLSHLVKL---NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +K      ++   N  L+ LV+    + +    + + + +  G V NVNTFN+VIY  C 
Sbjct: 161 MKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR------------- 275
           E K ++A+     M K    P+ V +N I++  C+ G L  A  L               
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNT 280

Query: 276 ---------KMG----------VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
                    KMG          +M+ +++LP+  T+N +ING C  GR+E A ++R  M 
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
              +  +V +Y TLI+G        EA +L +EM ++G+ PN V +N  + W   EG ++
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD 400

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A   ++ M +    PD  TY+ L  G C+ G + +AF+  +++  ++M  D+ + N ++
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LC+   L  A +LLSS   RG   D ++YGTLI GY K GN++ A+++++ MK+ E  
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAM 555
           P+ V YN II GLC+    + A S L      GLL D  TYNT+++GY   G + +AF  
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            ++M       +    NIL+  LC  G  ++A +L    +  G   D VTY TL+T   K
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               ++   L  +M    + PD+ TYNAII+ L
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 231/474 (48%), Gaps = 36/474 (7%)

Query: 167 DVIQKLKVKGH---SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
           D ++ L V G    S     +N  L  L K   +G    L  +M S G + N NT+N+++
Sbjct: 226 DAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL---------- 273
           Y  CK   L+EA ++   M ++ + P+V  +NM+IN  C  G +E A KL          
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345

Query: 274 ----------------------FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
                                 F+ +  MS   V PN+VTHN ++  +CK G+++ A   
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M ++G   +  TY TLI+GY + G+  EA R  DEM ++ +  ++V  N+ +  L  
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           E  +E A  +LS    +    D  +Y  L  G  ++G V +A KL +++ E+ ++    +
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YN +I  LC+      A   L+ ++  GL+PD  TY T++ GYC+ G++E A Q +  M 
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIA 550
           +   KP++   N ++ GLC +  L+ A  L       G  +D +TYNTLI      G++ 
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
           +AF + SEM    +  +   YN +I  L   G  ++A E M  M+  G +PD V
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 227/460 (49%), Gaps = 33/460 (7%)

Query: 148 VFDALVRACTQIGATEGAY---DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
            ++ L+      G  E A+   D ++ LK+    VS   +N  ++  ++ ++I   +KL 
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVS---YNTLINGCLEWSKISEAFKLL 371

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           +EM   G   N  T N+++   CKE K+++A +   +M +SG  P+ V +N +IN  C+ 
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G++  A   FR M  M   ++  +SVT N I+   C+  ++E A ++  +  K G   + 
Sbjct: 432 GNMGEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            +Y TLI GY + G+ + AL+L DEM ++ ++P+ V YN  I  L   G  E A+  L++
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           +++  + PD  TY+ +  G CR G V++AF+ HN+++E     D ++ NIL+  LC    
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGV 608

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A +L ++ + +G   D +TY TLI   CK G ++ A  +   M++ E  P+   YN+
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLD------------------------AITYNTLI 540
           II  L     +  A+  +      G L                         ++ Y+  I
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWI 728

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                 GK  +A  +F E +  GI V+K  Y  L++ L K
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 164/333 (49%), Gaps = 6/333 (1%)

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHWLFAEGDVEGALFVLSD 384
           T I  Y + G    A ++  +M +  L PN    N + NS + +  +   V  +    +D
Sbjct: 140 TAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHS-VSFSREAFND 198

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            I   I P+  T++I+  G C     K A +  N + + +   D  +YN +++ LCK   
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGR 258

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A+ LL  M  RGL+P+  TY  L+ GYCK G ++ A  V E M +    P++  YN 
Sbjct: 259 LGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNM 318

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +INGLC +  ++ A  L    + + LL D ++YNTLING     KI+EAF +  EM   G
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  N V +NI++ + CK G    A   +  M   G  PD VTY TL+  + K  +  E  
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              D+M    +  D+ T N I+  L  EK  E+
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEE 471


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 292/555 (52%), Gaps = 15/555 (2%)

Query: 68  SEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL-MSANSV 126
           S+F ++  L L+F TW   N+ F  S    C  +H+L  ++ +  A  L   L +SA+  
Sbjct: 67  SQFDQT--LTLKFLTW-ARNHPFFDS-HCKCLSLHILTRFKLYKTAQTLAQELALSASDP 122

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           S     + L DSY +  ++ AVFD +V++ + +   + A + I   K  G    + ++N+
Sbjct: 123 SGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNS 182

Query: 187 FLSHLVKLNEIGRF--WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
            L  +V+     +    ++Y+EM+      NV T+N++I   C   +L++ L  +  M +
Sbjct: 183 VLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMER 242

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           +G  PNVV +N +I+  C++G ++ A  L +    MS   + PN +++N IING C+ G 
Sbjct: 243 NGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKS---MSSKGMQPNLISYNVIINGLCREGS 299

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++ A EI   M   G   +  TY TL++GY + G+  +AL +  EMV+ G+ P+ V Y +
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I+ +    ++  A+     M  + + P+  TY+ L  G  R G + +A+++ N++ E  
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
                 +YN  I+  C    +  A  ++  M+ +GL PD+++Y T+I G+C+ G ++ A 
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAF 479

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           Q+ + M +    P+ V Y+S+I GLC+   L  A  L Q    +GL  D  TY TLIN Y
Sbjct: 480 QMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAY 539

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
            + G + +A  +  EM + G   + V Y++LIN L K    ++A+ L+  +I    +P  
Sbjct: 540 CVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSD 599

Query: 604 VTYTTLVTRFSKNCS 618
           VTY TL+    +NCS
Sbjct: 600 VTYDTLI----ENCS 610



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 228/433 (52%), Gaps = 6/433 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV-GDLEF-ALKLFRK 276
           F+L++ +      +++A++       SG  P V+ +N +++   +  G ++  A +++R+
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M       V PN  T+N +I GFC +G ++        M + G   NV TY TLID Y +
Sbjct: 205 M---IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK 261

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G  +EA  L   M  +G+ PN + YN  I+ L  EG ++ A  +L +M  K   PD  T
Sbjct: 262 MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 321

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ L  G C+ G   QA  +H +++   +     +Y  LIN +CK+ NL  A +    M 
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
           +RGL P+  TY TLIDG+ + G +  A ++   M +    P++V YN+ I+G C    ++
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 441

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  ++Q     GL  D ++Y+T+I+G+   G++  AF M  EM   G++ + V Y+ LI
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
             LC+     +A +L + M+  G+ PD  TYTTL+  +       + + LHD+M+  G  
Sbjct: 502 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 561

Query: 636 PDNQTYNAIISPL 648
           PD  TY+ +I+ L
Sbjct: 562 PDAVTYSVLINGL 574



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 243/491 (49%), Gaps = 22/491 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+ A  ++G  + A+ +++ +  KG   ++ ++N  ++ L +   +   W
Sbjct: 245 CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAW 304

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++ +EM   G+  +  T+N ++   CKE    +AL ++  M+++G+ P+VV +  +IN  
Sbjct: 305 EILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 364

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+  +L  A++ F +M +     + PN  T+  +I+GF + G +  A  I   M ++G  
Sbjct: 365 CKARNLNRAMEFFDQMRI---RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY   I G+      EEAL +  EMV++GL P+ V Y++ I     +G+++ A  +
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M++K + PD  TYS L +GLC    + +A  L  ++L+  +  D ++Y  LIN  C 
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             +L  A  L   MI +G +PD +TY  LI+G  K      A ++   +   E  P+ V 
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 601

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           Y+++I   C +      KS++                LI G+ + G + EA  +F  M  
Sbjct: 602 YDTLIEN-CSNIEF---KSVV---------------ALIKGFCMKGLMHEADRVFESMVE 642

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
                 +  YN++I+  C+ G   +A  L K MI  G +P  VT  TL+    K    EE
Sbjct: 643 RNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 702

Query: 622 VIELHDDMVLS 632
           + E+  D + S
Sbjct: 703 MSEVIGDTLRS 713



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 132/245 (53%), Gaps = 15/245 (6%)

Query: 409 CVKQAFKLHNQ--VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           C+K ++ ++N    + + MV  +YS+  +I+    + NLA +          G +P +++
Sbjct: 130 CLKDSYHVYNSSSAVFDLMV-KSYSHLNMIDQAVNTINLAKSS---------GFMPGVLS 179

Query: 467 YGTLIDGYCKG-GNIE-GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           Y +++D   +  G+++  A +VY  M +    PN+  YN +I G C    L         
Sbjct: 180 YNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGE 239

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +R G L + +TYNTLI+ Y   G+I EAF +   M + G+  N + YN++IN LC+ G 
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A E+++ M   G  PD VTY TL+  + K  +  + + +H +MV +GVSP   TY A
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359

Query: 644 IISPL 648
           +I+ +
Sbjct: 360 LINSM 364


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 174/591 (29%), Positives = 293/591 (49%), Gaps = 17/591 (2%)

Query: 29  PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENN 88
           P T +++  +I    +  +W  +E +   L  SLV+  +    K+P LA  F   +   +
Sbjct: 45  PITSEVLLESI----KSSQWHFIEHVTDKLIPSLVSTTLLSLVKTPDLAFNFVNHI---D 97

Query: 89  RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA--NSVSPLEFLEGLLDSYEICKATP 146
                 ++ C  + ++           L+  ++S   NSV  L F E +L    +   + 
Sbjct: 98  LRCLDFQTQCLAIAVVSKLSSPKSVTQLLKEVVSTRKNSVRDL-FDELVLAHDRLQTKST 156

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +FD +VR   Q+   + A +    +K KG        N+ LS L +LN I   W  Y +
Sbjct: 157 ILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYAD 216

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       NV TFN++I  LCKE KL++A      M   GI P +V +N ++      G 
Sbjct: 217 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A  +  +M         P+  T+N I++  C  GR   A E+   M   G+  +  +
Sbjct: 277 IEGARMIISEM---KSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVS 330

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LI G +  G  E A    DEMVK+G++P    YN+ IH LF E  +E A  ++ ++ 
Sbjct: 331 YNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 390

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K I  D  TY+I+  G C++G  K+AF LH++++ + +    ++Y  LI  LC+ N   
Sbjct: 391 EKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTR 450

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L   ++ +G+ PD++   TL+DG+C  GN++ A  + + M ++   P+ V YN ++
Sbjct: 451 EADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLM 510

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLC +   + A+ L+   +R G+  D I+YNTLI+GY   G    AF +  EM ++G  
Sbjct: 511 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFN 570

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
              + YN L+  L K    + A EL++ M   GI+P+  ++ +++   SK+
Sbjct: 571 PTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 225/438 (51%), Gaps = 7/438 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+ ++   C+   ++EA+  +Y M + G  P     N I++   ++  +E A   +  M 
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M   S   N  T N +IN  CK G+++ A+     M   GI   + TY TL+ GY+  G
Sbjct: 219 RMEIKS---NVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRG 275

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E A  +  EM  +G  P+   YN  + W+  EG    A  VL +M    + PD  +Y+
Sbjct: 276 RIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYN 332

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL +G   NG ++ AF   ++++++ MV   Y+YN LI+ L   N + AA+ L+  +  +
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 392

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G++ D +TY  +I+GYC+ G+ + A  +++ M     KP    Y S+I  LC+      A
Sbjct: 393 GIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREA 452

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +     G+  D +  NTL++G+   G +  AF++  EM  + I  + V YN L+  
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LC  G +++ARELM  M   GI PD+++Y TL++ +SK    +    + D+M+  G +P 
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPT 572

Query: 638 NQTYNAIISPLLGEKSAE 655
             TYNA++  L   +  E
Sbjct: 573 LLTYNALLKGLSKNQDGE 590



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 187/408 (45%), Gaps = 42/408 (10%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           + + F+ ++   CQ+  ++ A++ F  M     D   P + T N I++   +L R+E A 
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFD---PKTETCNHILSLLSRLNRIENAW 211

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                M +  I  NV T+  +I+   + G  ++A      M   G+ P  V YN+ +   
Sbjct: 212 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGY 271

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G +EGA  ++S+M  K   P                                   D 
Sbjct: 272 SLRGRIEGARMIISEMKSKGFQP-----------------------------------DL 296

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YN +++++C   N   A ++L  M   GL+PD ++Y  LI G    G++E A    + 
Sbjct: 297 QTYNPILSWMC---NEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDE 353

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M K    P    YN++I+GL  +  ++AA+ L++  +  G+ LD++TYN +INGY  +G 
Sbjct: 354 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGD 413

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
             +AFA+  EM   GI   +  Y  LI  LC+    ++A EL + ++  G+ PD V   T
Sbjct: 414 AKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNT 473

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+       + +    L  +M    + PD+ TYN ++  L GE   E+
Sbjct: 474 LMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 178/378 (47%), Gaps = 36/378 (9%)

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV- 192
           G+++S+ I K T   ++ LV+  +  G  EGA  +I ++K KG    +  +N  LS +  
Sbjct: 250 GIMESFGI-KPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCN 308

Query: 193 --KLNEIGRFWK----------------------------LYK-EMVSCGYVENVNTFNL 221
             + +E+ R  K                             Y+ EMV  G V    T+N 
Sbjct: 309 EGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNT 368

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I+ L  E K+E A  L   + + GI  + V +N++IN  CQ GD + A  L  +M    
Sbjct: 369 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMT-- 426

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
            D + P   T+  +I   C+  +   A+E+   ++  G+  ++    TL+DG+   G+ +
Sbjct: 427 -DGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            A  L  EM +  + P++V YN  +  L  EG  E A  ++ +M  + I PDH +Y+ L 
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G  + G  K AF + +++L         +YN L+  L K+ +   A++LL  M   G++
Sbjct: 546 SGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIV 605

Query: 462 PDIITYGTLIDGYCKGGN 479
           P+  ++ ++I+   K  N
Sbjct: 606 PNDSSFCSVIEAMSKSDN 623


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 175/583 (30%), Positives = 275/583 (47%), Gaps = 82/583 (14%)

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK----GHSVSIHAWNNFLS 189
           GL   Y  C A   + D  +R        EG  D + ++K      G  +++  +N  + 
Sbjct: 239 GLKPDYNACSA---LIDGFMR--------EGDIDEVLRIKDVMVSCGIPINLITYNVLIH 287

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K  ++ +  ++ K M++ G   N  TF L+I   C+E  +  AL L   M K  + P
Sbjct: 288 GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 347

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGV------------------------------ 279
           + V +  +IN  C   DL  A KL  KM                                
Sbjct: 348 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407

Query: 280 --MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             MS   V P+   +N II+   K G++E A      +   G+  +  T+   I GY++ 
Sbjct: 408 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 467

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVY----------------------------------- 362
           G   EA +  DEM+  GLMPNN +Y                                   
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           ++ IH L   G V+ AL V S++ +K + PD FTYS L  G C+ G V++AF+LH+++  
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  + + YN L++ LCKS ++  A++L   M  +GL PD +TY T+IDGYCK  N+  
Sbjct: 588 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 647

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           A  ++  M     +P+  +YN++++G CK+  ++ A +L +   + G    +++NTLI+G
Sbjct: 648 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDG 707

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y  + KI EA  +F EM    I  + V Y  +I++ CK G  ++A  L K M    +I D
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 767

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            VTYT+L+  ++K     EV  L + MV  GV PD  TY  +I
Sbjct: 768 TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 810



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 184/715 (25%), Positives = 327/715 (45%), Gaps = 102/715 (14%)

Query: 27  ANPSTEDIVF-RAICVNLRQRKWK--ILEQMAPSLTNSLVNRVVSEFRK--SPKLALEFY 81
           + P++E + F + I   L+Q  WK  ++    PS  N  V R V    +   PK  L+F+
Sbjct: 32  STPTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFF 91

Query: 82  TWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA--NSVSPLEFLEGLLDSY 139
            W          L+S   +   L N   F  A  ++  ++    +S S L+ +     +Y
Sbjct: 92  YWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNY 151

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVI------------------------------ 169
               ++P VFD L+ +  ++G  + A +V                               
Sbjct: 152 G--GSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNT 209

Query: 170 -----------------------QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
                                  ++++  G     +A +  +   ++  +I    ++   
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MVSCG   N+ T+N++I+ LCK  K+E+A  +   M+  G  PN   F ++I   C+  +
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  AL+L  +   M   +++P++V++  +ING C    +  A ++   M  +G+  NV  
Sbjct: 330 MGRALELLDE---MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+TLI GYA  G  EEA RL D M   G+ P+   YN+ I  L   G +E A   L ++ 
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL- 445
            + + PD  T+     G  + G + +A K  +++L+  ++ +   Y +LIN   K+ NL 
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 506

Query: 446 ----------------------------------AAAKQLLSSMIVRGLIPDIITYGTLI 471
                                               A ++ S +  +GL+PD+ TY +LI
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
            G+CK G +E A ++++ M      PN+ IYN++++GLCK   +  A+ L       GL 
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D++TY+T+I+GY  +  +AEAF++F EM + G+  +   YN L++  CK G  ++A  L
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            + M+  G     +++ TL+  + K+C  +E  +L  +M+   + PD+ TY  +I
Sbjct: 687 FREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 246/495 (49%), Gaps = 5/495 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    V+  L+      G  E A  ++  +   G +  I  +N  +S L K  ++     
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
              E+   G   +  TF   I    K  K+ EA   +  ML  G+ PN   + ++IN   
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+L  AL +FR +  +    VLP+  T +  I+G  K GRV+ A ++   + + G+  
Sbjct: 501 KAGNLMEALSIFRHLHALG---VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 557

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY++LI G+ + G  E+A  L DEM  +G+ PN  +YN+ +  L   GD++ A  + 
Sbjct: 558 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 617

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +K + PD  TYS +  G C++  V +AF L +++  + +   ++ YN L++  CK 
Sbjct: 618 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 677

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++  A  L   M+ +G     +++ TLIDGYCK   I+ A Q+++ M   +  P+ V Y
Sbjct: 678 GDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 736

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+  CK   ++ A  L +  Q   L+ D +TY +L+ GY   G+ +E FA+F +M  
Sbjct: 737 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVA 796

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  ++V Y ++I   CK     +A +L   ++  G++     +  L+T   K     E
Sbjct: 797 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 856

Query: 622 VIELHDDMVLSGVSP 636
             +L D+M   G+ P
Sbjct: 857 ASKLLDEMGELGLKP 871



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 215/448 (47%), Gaps = 51/448 (11%)

Query: 252 VCFNMIINEACQVGDLEFALKLF---------------RKMGVMSGDSVLPNSVTHNCII 296
           V F+++I+   ++G L+ A  +F                 +  M    ++PN+ T+  I 
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIIT 216

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            G C+  R+  A+     M K G+  +    + LIDG+ R G  +E LR+ D MV  G+ 
Sbjct: 217 AGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP 276

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            N + YN  IH L   G +E A  +L  MI     P+  T+ +L +G CR   + +A +L
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +++ + ++V  A SY  +IN LC   +L+ A +LL  M   GL P+++ Y TLI GY  
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYAS 396

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
            G IE A ++ + M      P++  YN+II+ L K   ++ A + L   Q  GL  DA+T
Sbjct: 397 EGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVT 456

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN------------------- 576
           +   I GY   GK+ EA   F EM + G+  N   Y +LIN                   
Sbjct: 457 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516

Query: 577 ----------------FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
                            L K G  Q+A ++   +   G++PD  TY++L++ F K    E
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  ELHD+M L G++P+   YNA++  L
Sbjct: 577 KAFELHDEMCLKGIAPNIFIYNALVDGL 604



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 196/380 (51%), Gaps = 6/380 (1%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF   +L+    + G  E A+++  ++ +KG + +I  +N  +  L K  +I R  KL
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 616

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M   G   +  T++ +I   CK   + EA SL++ M   G+ P+   +N +++  C+
Sbjct: 617 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 676

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            GD+E A+ LFR+M +  G      +++ N +I+G+CK  +++ A ++   MI   I  +
Sbjct: 677 EGDMEKAMNLFREM-LQKG---FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY T+ID + + G  EEA  L  EM +R L+ + V Y S ++     G       +  
Sbjct: 733 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 792

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M+ K + PD  TY ++    C+   + +AFKL ++V+ + M+     +++LI  LCK  
Sbjct: 793 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 852

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +L  A +LL  M   GL P +    TL+  + + G ++ A +V+E +K +   P+     
Sbjct: 853 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 912

Query: 504 SIINGLCKDASLDAAKSLLQ 523
            ++NG   D   + A++L++
Sbjct: 913 DLVNGNLNDTDSEDARNLIK 932



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 212/426 (49%), Gaps = 12/426 (2%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           GNLM A S+       G+L   + C A        +    + G  + A  V  +LK KG 
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSA-------FIHGLLKNGRVQEALKVFSELKEKGL 555

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
              +  +++ +S   K  E+ + ++L+ EM   G   N+  +N ++  LCK   ++ A  
Sbjct: 556 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 615

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L+  M + G+ P+ V ++ +I+  C+  ++  A  LF +M       V P+S  +N +++
Sbjct: 616 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM---PSKGVQPHSFVYNALVH 672

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK G +E A  +   M++ G    + ++ TLIDGY +    +EA +L  EM+ + +MP
Sbjct: 673 GCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 731

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           ++V Y + I W    G +E A  +  +M ++++  D  TY+ L  G  + G   + F L 
Sbjct: 732 DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF 791

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            +++ + +  D  +Y ++I   CK +NL  A +L   ++ +G++     +  LI   CK 
Sbjct: 792 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 851

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
            ++  A ++ + M ++  KP+L   ++++    +   +D A  + +  + +GL+ D  T 
Sbjct: 852 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 911

Query: 537 NTLING 542
             L+NG
Sbjct: 912 IDLVNG 917


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 185/626 (29%), Positives = 302/626 (48%), Gaps = 18/626 (2%)

Query: 27  ANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNS-----LVNRVVSEFRKSPKLALEFY 81
           + PS +DI   ++           L+Q  P L++S      V++ + + +  PK AL+F+
Sbjct: 64  SKPSFDDIASESM--------RSFLQQDGPHLSDSALAPIWVSKALVKLKGDPKSALKFF 115

Query: 82  TWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSP-LEFLEGLLDSYE 140
              G    F H+ ES C + H+L     + DA  ++   +      P  +F + L  +  
Sbjct: 116 KEAGARAGFRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRN 175

Query: 141 ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           +C+    VFD L      +G  E A     K+        + + N  L  L K ++ G  
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
              +K+MV  G   +V T+N+VI  L +E  LE A SL+  M   G+ P++V +N +I+ 
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             +VG L  A+ +F +M     +   P+ +T+N +IN FCK  R+  A E  + M + G+
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCE---PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV TY+TLID + + G   EA +   +M++ GL PN   Y S I      GD+  A  
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK 412

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           + S+M    +  +  TY+ L  GLC +G +++A +L   +L+     +   Y  L +   
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYI 472

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  +L  M  + L PD++ YGT I G C+   IE ++ V   M       N  
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
           IY ++I+   K      A +LLQ  Q +G+ +  +TY  LI+G    G + +A   F  M
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G+  N + Y  LI+ LCK  C ++A+ L   M+  GI PD + YT+L+    K+ +P
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAII 645
            E + L + MV  G+  D   Y ++I
Sbjct: 653 GEALSLRNRMVEIGMELDLCAYTSLI 678



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 254/493 (51%), Gaps = 6/493 (1%)

Query: 145 TPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +P+VF  + ++    + G  E A  + +++K KG    I  +N+ +    K+  +     
Sbjct: 248 SPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVS 307

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +++EM   G   +V T+N +I   CK  ++ +A    + M + G+ PNVV ++ +I+  C
Sbjct: 308 VFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFC 367

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G L  A K F  M +  G  + PN  T+  +I+  CK+G +  A ++   M +AG++ 
Sbjct: 368 KAGMLLEANKFFVDM-IRVG--LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL 424

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+ TY  L+DG    G   EA  L   ++K G   N  +Y S  H       +E A+ +L
Sbjct: 425 NIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  K++ PD   Y     GLCR   ++ +  +  ++++  +  ++Y Y  LI+   K 
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKV 544

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                A  LL  M   G+   ++TYG LIDG CK G ++ AV+ +++M +   +PN++IY
Sbjct: 545 GKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIY 604

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+GLCK+  L+ AK+L       G+  D + Y +LI+G   +G   EA ++ + M  
Sbjct: 605 TALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           +G+ ++   Y  LI    ++G  Q A+ L+  M+  GIIPD V    L+ ++ +     E
Sbjct: 665 IGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINE 724

Query: 622 VIELHDDMVLSGV 634
            + LHDDM   G+
Sbjct: 725 ALALHDDMARRGL 737



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 1/333 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + TL +     G  EEA +   +M K  ++P     N  +H L        AL    DM+
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + P  FTY+++   L R G ++ A  L  ++  + +  D  +YN LI+   K   L 
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLT 303

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +   M   G  PD+ITY +LI+ +CK   I  A +    MK+   +PN+V Y+++I
Sbjct: 304 GAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +  CK   L  A        R+GL  +  TY +LI+     G + EAF + SEM+  G+ 
Sbjct: 364 DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVN 423

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           +N V Y  L++ LC+ G  ++A EL   ++  G   +   YT+L   + K    E+ +++
Sbjct: 424 LNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDI 483

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            ++M    + PD   Y   I  L  +   ED +
Sbjct: 484 LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 183/424 (43%), Gaps = 32/424 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +++L+    +      A++ +  +K +G   ++  ++  +    K   +    
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K + +M+  G   N  T+  +I A CK   L EA  L   M ++G+  N+V +  +++  
Sbjct: 377 KFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGL 436

Query: 262 CQVGDLEFALKLF-----------------------------RKMGV---MSGDSVLPNS 289
           C+ G +  A +LF                             + M +   M+  ++ P+ 
Sbjct: 437 CEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDL 496

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           + +   I G C+   +E +  +   M+  G+  N   Y TLID Y + G + EA+ L  E
Sbjct: 497 LLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQE 556

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M   G+    V Y   I  L   G V+ A+     M    + P+   Y+ L  GLC+N C
Sbjct: 557 MQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDC 616

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +++A  L N++L++ +  D   Y  LI+   K  N   A  L + M+  G+  D+  Y +
Sbjct: 617 LEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTS 676

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G+ + G ++ A  + + M +    P+ V+   ++    +   ++ A +L     R G
Sbjct: 677 LIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736

Query: 530 LLDA 533
           L+  
Sbjct: 737 LISG 740


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 176/583 (30%), Positives = 275/583 (47%), Gaps = 82/583 (14%)

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK----GHSVSIHAWNNFLS 189
           GL   Y  C A   + D  +R        EG  D + ++K      G  +++  +N  + 
Sbjct: 328 GLKPDYNACSA---LIDGFMR--------EGDIDEVLRIKDVMVSCGIPINLITYNVLIH 376

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K  ++ +  ++ K MV+ G   N  TF L+I   C+E  +  AL L   M K  + P
Sbjct: 377 GLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 436

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGV------------------------------ 279
           + V +  +IN  C   DL  A KL  KM                                
Sbjct: 437 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLL 496

Query: 280 --MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             MS   V P+   +N II+   K G++E A      +   G+  +  T+   I GY++ 
Sbjct: 497 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 556

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVY----------------------------------- 362
           G   EA +  DEM+  GLMPNN +Y                                   
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           ++ IH L   G V+ AL V S++ +K + PD FTYS L  G C+ G V++AF+LH+++  
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  + + YN L++ LCKS ++  A++L   M  +GL PD +TY T+IDGYCK  N+  
Sbjct: 677 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 736

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           A  ++  M     +P+  +YN++++G CK+  ++ A +L +   + G    +++NTLI+G
Sbjct: 737 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDG 796

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y  + KI EA  +F EM    I  + V Y  +I++ CK G  ++A  L K M    +I D
Sbjct: 797 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 856

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            VTYT+L+  ++K     EV  L + MV  GV PD  TY  +I
Sbjct: 857 TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI 899



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 192/648 (29%), Positives = 309/648 (47%), Gaps = 47/648 (7%)

Query: 43  LRQRKWK--ILEQMAPSLTNSLVNRVVSEFRK--SPKLALEFYTWVGENNRFSHSLESSC 98
           L+Q  WK  ++    PS  N  V R V    +   PK  L+F+ W          L+S  
Sbjct: 51  LKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFS 110

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSA--NSVSPLEFLEGLLDSYEICKATPAVFDALVRAC 156
            +   L N   F  A  ++  ++    +S S L+ +     +Y    ++P VFD L+ + 
Sbjct: 111 ILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYG--GSSPVVFDILIDSY 168

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            ++G  + A +V    K     +S+   N+ L  L+K   +  FWK+Y  M+      +V
Sbjct: 169 KRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDV 228

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T+  ++ ALCK   L  A  +   M + G+ PN   ++++I   CQVGD++ A++L R 
Sbjct: 229 YTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRS 288

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           MG      ++PN+ T+  I  G C+  R+  A+     M K G+  +    + LIDG+ R
Sbjct: 289 MG---EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 345

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G  +E LR+ D MV  G+  N + YN  IH L   G +E A  +L  M+     P+  T
Sbjct: 346 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRT 405

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           + +L +G CR   + +A +L +++ + ++V  A SY  +IN LC   +L+ A +LL  M 
Sbjct: 406 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 465

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             GL P+++ Y  LI  Y   G IE A ++ + M      P++  YN+II+ L K   ++
Sbjct: 466 FSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 525

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A + L   Q  GL  DA+T+   I GY   GK+ EA   F EM + G+  N   Y +LI
Sbjct: 526 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 585

Query: 576 N-----------------------------------FLCKFGCYQQARELMKVMILHGII 600
           N                                    L K G  Q+A ++   +   G++
Sbjct: 586 NGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 645

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           PD  TY++L++ F K    E+  ELHD+M L G++P+   YNA++  L
Sbjct: 646 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 693



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 251/504 (49%), Gaps = 5/504 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    V+  L+ A    G  E A  ++  +   G +  I  +N  +S L K  ++     
Sbjct: 470 KPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 529

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
              E+   G   +  TF   I    K  K+ EA   +  ML  G+ PN   + ++IN   
Sbjct: 530 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+L  AL +FR++  +    VLP+  T +  I+G  K GRV+ A ++   + + G+  
Sbjct: 590 KAGNLMEALSIFRRLHALG---VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY++LI G+ + G  E+A  L DEM  +G+ PN  +YN+ +  L   GD++ A  + 
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +K + PD  TYS +  G C++  V +AF L +++  + +   ++ YN L++  CK 
Sbjct: 707 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 766

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++  A  L   M+ +G     +++ TLIDGYCK   I+ A Q+++ M   +  P+ V Y
Sbjct: 767 GDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 825

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+  CK   ++ A  L +  Q   L+ D +TY +L+ GY   G+ +E FA+F +M  
Sbjct: 826 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVA 885

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  ++V Y ++I   CK     +A +L   ++  G++     +  L+T   K     E
Sbjct: 886 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 945

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
             +L D+M   G+ P     N ++
Sbjct: 946 ASKLLDEMGELGLKPSLAACNTLV 969



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 243/529 (45%), Gaps = 42/529 (7%)

Query: 120  LMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGH 177
            +M+  S   +E    LLD        P +F  +A++   ++ G  E A   + +++ +G 
Sbjct: 480  IMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 539

Query: 178  SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
                  +  F+    K  ++    K + EM+  G + N   + ++I    K   L EALS
Sbjct: 540  KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 599

Query: 238  LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
            ++ R+   G+ P+V   +  I+   + G ++ ALK+F ++       ++P+  T++ +I+
Sbjct: 600  IFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL---KEKGLVPDVFTYSSLIS 656

Query: 298  GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
            GFCK G VE A E+   M   GI  N+  Y  L+DG  + G  + A +L D M ++GL P
Sbjct: 657  GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 716

Query: 358  NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
            ++V Y++ I       +V  A  +  +M  K + P  F Y+ L  G C+ G +++A  L 
Sbjct: 717  DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF 776

Query: 418  NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             ++L++       S+N LI+  CKS  +  A QL   MI + ++PD +TY T+ID +CK 
Sbjct: 777  REMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 835

Query: 478  GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
            G +E A  +++ M++     + V Y S++ G  K        +L +     G+  D +TY
Sbjct: 836  GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTY 895

Query: 537  NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-- 594
              +I  +     + EAF +  E+   G+      +++LI  LCK     +A +L+  M  
Sbjct: 896  GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 955

Query: 595  ---------------ILH------------------GIIPDYVTYTTLV 610
                             H                  G++PD  T   LV
Sbjct: 956  LGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 1004



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 196/380 (51%), Gaps = 6/380 (1%)

Query: 146  PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            P VF   +L+    + G  E A+++  ++ +KG + +I  +N  +  L K  +I R  KL
Sbjct: 646  PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 705

Query: 204  YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
            +  M   G   +  T++ +I   CK   + EA SL++ M   G+ P+   +N +++  C+
Sbjct: 706  FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 765

Query: 264  VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
             GD+E A+ LFR+M +  G      +++ N +I+G+CK  +++ A ++   MI   I  +
Sbjct: 766  EGDMEKAMNLFREM-LQKG---FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821

Query: 324  VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
              TY T+ID + + G  EEA  L  EM +R L+ + V Y S ++     G       +  
Sbjct: 822  HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 881

Query: 384  DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
             M+ K + PD  TY ++    C+   + +AFKL ++V+ + M+     +++LI  LCK  
Sbjct: 882  KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 941

Query: 444  NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +L  A +LL  M   GL P +    TL+  + + G ++ A +V+E +K +   P+     
Sbjct: 942  DLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 1001

Query: 504  SIINGLCKDASLDAAKSLLQ 523
             ++NG   D   + A++L++
Sbjct: 1002 DLVNGNLNDTDSEDARNLIK 1021



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 212/426 (49%), Gaps = 12/426 (2%)

Query: 118  GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
            GNLM A S+       G+L   + C A        +    + G  + A  V  +LK KG 
Sbjct: 592  GNLMEALSIFRRLHALGVLPDVQTCSA-------FIHGLLKNGRVQEALKVFSELKEKGL 644

Query: 178  SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
               +  +++ +S   K  E+ + ++L+ EM   G   N+  +N ++  LCK   ++ A  
Sbjct: 645  VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 704

Query: 238  LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
            L+  M + G+ P+ V ++ +I+  C+  ++  A  LF +M       V P+S  +N +++
Sbjct: 705  LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM---PSKGVQPHSFVYNALVH 761

Query: 298  GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
            G CK G +E A  +   M++ G    + ++ TLIDGY +    +EA +L  EM+ + +MP
Sbjct: 762  GCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 820

Query: 358  NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
            ++V Y + I W    G +E A  +  +M ++++  D  TY+ L  G  + G   + F L 
Sbjct: 821  DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF 880

Query: 418  NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             +++ + +  D  +Y ++I   CK +NL  A +L   ++ +G++     +  LI   CK 
Sbjct: 881  EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 940

Query: 478  GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
             ++  A ++ + M ++  KP+L   N+++    +   +D A  + +  + +GL+ D  T 
Sbjct: 941  EDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 1000

Query: 537  NTLING 542
              L+NG
Sbjct: 1001 IDLVNG 1006



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 25/265 (9%)

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           ++SIL   LC +    + F L N VL + +     S +IL + L    N   +       
Sbjct: 108 SFSILAVQLCNS----ELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSP----- 158

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
                    + +  LID Y + G ++ A  V+   K      +L+  NS++  L K   +
Sbjct: 159 ---------VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMM 209

Query: 516 D----AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           +        +L A  ++G  D  TY  L+      G +  A  +  EM   G+  N+  Y
Sbjct: 210 ELFWKVYNGMLDA--KMGF-DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIY 266

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           +++I  +C+ G   +A EL + M   G++P+  TYT +     +     E     ++M  
Sbjct: 267 SLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK 326

Query: 632 SGVSPDNQTYNAIISPLLGEKSAED 656
           +G+ PD    +A+I   + E   ++
Sbjct: 327 TGLKPDYNACSALIDGFMREGDIDE 351


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 185/643 (28%), Positives = 325/643 (50%), Gaps = 16/643 (2%)

Query: 15  PLS-RAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQ---MAPSLTNSLVNRVVSEF 70
           P+S +A       A    ED V R I   L    W+ L +   +   L   ++  V+ + 
Sbjct: 6   PISHKAASFSSSQALTQNEDSV-REITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQN 64

Query: 71  R-KSPKLALEFYTWVGE---NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV 126
           +   PK  L F+ W       +     L+   A+   L N   +  A  L+  ++  NS 
Sbjct: 65  QVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIR-NSD 123

Query: 127 SPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           SPL  L  ++  Y  C  +P   +FD L+ +  ++G    A +V    K      S+ + 
Sbjct: 124 SPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSC 183

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N+ L  L+K N++  FWK++  M +   + +V T+  +I A CK   +++A  +   M +
Sbjct: 184 NSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE 243

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G  PN+V +N+II   C+   L+ A++L R M       ++P+  T++ +INGFC   R
Sbjct: 244 KGCSPNLVTYNVIIGGLCRARLLDEAIELKRSM---VDKGLVPDLYTYDILINGFCMEKR 300

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
              A+ +   MI  G+     TY  LIDG+ R G  E+A R+ DEMV  G+  N +++N+
Sbjct: 301 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 360

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++ +   G +E AL ++ +M++K + PD  TYS+L +G CR   + +AF+L +++ +  
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +     +Y+++IN LC+  NL     +L  M++ GL P+ + Y TL+  + K G +E + 
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS-LLQASQRIGLLDAITYNTLINGY 543
            + E M++    P++  YNS+I G CK   ++ A++ L++  +R    +A TY   I+GY
Sbjct: 481 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 540

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G++  A   F+EM + G+  N   Y  LI   CK G   +A  + + ++   ++ D 
Sbjct: 541 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 600

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            TY+ L+   S+N    E   +  ++   G+ P+  TYN++IS
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 166/572 (29%), Positives = 266/572 (46%), Gaps = 69/572 (12%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K  P  ++AL+    + G  E A+ +  ++   G   ++  WN  L+ + K  ++ +  +
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + +EM+  G   +  T++L+I   C+   +  A  L   M K  + P V+ +++IIN  C
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 263 QVGDLEFALKLFRKMGVMSG---------------------------------DSVLPNS 289
           + G+L+    + R+M VM+G                                   +LP+ 
Sbjct: 437 RCGNLQGTNAILREM-VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 495

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
             +N +I GFCK  R+E A      M++  +  N  TY   IDGY++ G  E A R  +E
Sbjct: 496 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 555

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  G++PN  +Y + I     EG+V  A  V   ++ + +  D  TYS+L  GL RNG 
Sbjct: 556 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           + +AF + +++ E+ ++ +A++YN LI+  CK  N+  A QLL  M ++G+ PDI+TY  
Sbjct: 616 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675

Query: 470 LI-----------------------------------DGYCKGGNIEGAVQVYENMKKVE 494
           LI                                   DGYCK  N   A Q+ E M    
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
             P+  IYN I+N  CK+   + A  L Q     G    +++NTLI GY  +GK+ EA  
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 795

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  EM       N V Y  LI+  CK G   +A+ L   M    ++P   TYT+L+  + 
Sbjct: 796 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 855

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              +  EV  L ++MV  G+ PD  TY  +I 
Sbjct: 856 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 887



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 167/569 (29%), Positives = 285/569 (50%), Gaps = 44/569 (7%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLK 173
           L+G+L+  N V   E    + D     K  P V+    ++ A  ++G  + A  V+ ++ 
Sbjct: 186 LLGDLLKGNKV---ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG 242

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            KG S ++  +N  +  L +   +    +L + MV  G V ++ T++++I   C E +  
Sbjct: 243 EKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 302

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA  +   M+  G+ P  + +N +I+   + GD+E A   FR    M    +  N +  N
Sbjct: 303 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA---FRIKDEMVACGIEANLIIWN 359

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            ++NG CK G++E A EI   M++ G++ + +TY+ LI+G+ RG +   A  L DEM KR
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
            L P  + Y+  I+ L   G+++G   +L +M+   + P+   Y+ L     + G V+++
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             +  ++ E+ ++ D + YN LI   CK+  +  A+  L  M+ R L P+  TYG  IDG
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRI--- 528
           Y K G +E A + +  M      PN+ IY ++I G CK+ ++  A S+ +   S+R+   
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 529 ------------------------------GLL-DAITYNTLINGYFINGKIAEAFAMFS 557
                                         GLL +A TYN+LI+G    G + +A  +  
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   GI  + V YNILI+ LCK G  ++A+ L   +   G+ P+ VTY  +V  + K+ 
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +P    +L ++M+L GV PD   YN I++
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILN 748



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 268/558 (48%), Gaps = 44/558 (7%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQ 170
           +LL+ G+    N     E    LLD  +  K  P V  +  ++    + G  +G   +++
Sbjct: 394 SLLIEGHCRGQNMARAFE----LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 449

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++ + G   +   +   ++   K   +     + + M   G + +V  +N +I   CK  
Sbjct: 450 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 509

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++EEA +    ML+  + PN   +   I+   + G++E A + F +M +  G  VLPN  
Sbjct: 510 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCG--VLPNVG 566

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +  +I G CK G V  A  +   ++   +  +V+TY+ LI G +R G   EA  +  E+
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            ++GL+PN   YNS I     +G+V+ A  +L +M  K I PD  TY+IL  GLC+ G +
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD------- 463
           ++A  L + +    +  +  +Y  +++  CKS N  AA QLL  M++RG+ PD       
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746

Query: 464 ---------------------------IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
                                       +++ TLI+GYCK G ++ A  + E M + +  
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806

Query: 497 PNLVIYNSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
           PN V Y S+I+  CK   +  AK L L+  +R  +  A TY +L++GY   G ++E  A+
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F EM   GI  +K+ Y ++I+  C+ G   +A +L   +++ G+      Y  L+    K
Sbjct: 867 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCK 926

Query: 616 NCSPEEVIELHDDMVLSG 633
                EV++L +++  SG
Sbjct: 927 KEEFFEVLKLLNEIGESG 944



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 199/376 (52%), Gaps = 11/376 (2%)

Query: 287 PNSVTHNCIINGFCKLG-RVE----FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
           PNSV  + +++ + K+G  VE    F     +    + + CN     +L+    +G   E
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCN-----SLLGDLLKGNKVE 197

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
              ++ D M    ++P+   Y + I      G+V+ A  VL +M +K   P+  TY+++ 
Sbjct: 198 LFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVII 257

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GLCR   + +A +L   ++++ +V D Y+Y+ILIN  C       AK +L  MI  GL 
Sbjct: 258 GGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLK 317

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P+ ITY  LIDG+ + G+IE A ++ + M     + NL+I+N+++NG+CK   ++ A  +
Sbjct: 318 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 377

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +Q     G+  D+ TY+ LI G+     +A AF +  EM+   +A   + Y+++IN LC+
Sbjct: 378 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 437

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G  Q    +++ M+++G+ P+ V YTTL+T  +K    EE   + + M   G+ PD   
Sbjct: 438 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 497

Query: 641 YNAIISPLLGEKSAED 656
           YN++I      K  E+
Sbjct: 498 YNSLIIGFCKAKRMEE 513



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 179/376 (47%), Gaps = 4/376 (1%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             +++L+    + G  + A  +++++ +KG +  I  +N  +  L K  EI R   L+ ++
Sbjct: 637  TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 696

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
               G   N  T+  ++   CK      A  L   ML  G+ P+   +N+I+N  C+    
Sbjct: 697  EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 756

Query: 268  EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
            E AL LF++M     +    ++V+ N +I G+CK G+++ A  +   MI+     N  TY
Sbjct: 757  EKALDLFQEML----EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 812

Query: 328  ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +LID   + G   EA RL  EM +R +MP    Y S +H     G++     +  +M+ 
Sbjct: 813  TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 872

Query: 388  KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            K I PD  TY ++    CR G V +A KL +++L + M     +Y+ LI  LCK      
Sbjct: 873  KGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFE 932

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              +LL+ +   G    + T   +  G+   GN++ A +V  +M K     N      +++
Sbjct: 933  VLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVD 992

Query: 508  GLCKDASLDAAKSLLQ 523
            G    A+ + + +LL+
Sbjct: 993  GNQNGANSEDSDNLLK 1008



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 10/178 (5%)

Query: 174  VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
             K ++  +H ++N       +  +     L++EMV+ G   +  T+ ++I A C+E  + 
Sbjct: 844  AKTYTSLLHGYHN-------IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 896

Query: 234  EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            EA  L   +L  G+  +V  ++ +I   C+  +    LKL  ++G       LP   T +
Sbjct: 897  EACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLP---TCS 953

Query: 294  CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
             I  GF   G ++ A E+  +M+K G   N  +   L+DG   G +SE++  L  +M 
Sbjct: 954  VIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 35/163 (21%)

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           G  +++ ++ L++ Y   G + EA  +F   +N     + +  N L+  L K    +   
Sbjct: 141 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRF-----------------SKNCSP------------ 619
           ++   M  H ++PD  TYT +++                    K CSP            
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260

Query: 620 ------EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                 +E IEL   MV  G+ PD  TY+ +I+    EK + +
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSRE 303


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 191/632 (30%), Positives = 311/632 (49%), Gaps = 17/632 (2%)

Query: 33  DIVFRAICVNLRQRKWKIL-------EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVG 85
           D   R   + L+++ W+IL        ++ P +  S++ +  SE   S +L   F+ W  
Sbjct: 55  DDTVREFSMILKRKDWQILLNNEDNVRKLNPEIVCSVLQK--SEIDDSVRLQ-NFFHWSS 111

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EICKA 144
                   L S   +   L N      A  ++  L+      PLE L+ L+  Y E   +
Sbjct: 112 SKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRK-PPLEILDSLVRCYREFGGS 170

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
              VFD  +     +G    A  V      +G   ++   NN +  L+K N +G FWK+Y
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             MV    V +V T+  VI A CK   + +   +   M K    PN+  +N  I   CQ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQT 289

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G ++ AL++ +   +M    + P+  T+  +++GFCK  R + A+ I  +M  +G++ N 
Sbjct: 290 GAVDEALEVKK---LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LIDG+ + G+ EEALR+ DEM+ RGL  N V YN+ I  +   G++  A+ + ++
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+   I PD +TY++L  G  ++  + +A +L  ++    +    ++Y++LI+ LC S++
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A ++L  MI  G+ P++  YGTLI  Y +    E A+++ + M      P+L  YN 
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I GLC+   ++ AK LL      G+  +A TY   IN Y  +G+I  A   F +M + G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I  N V Y ILI   C  G   +A    K M+  G+IPD   Y+ ++   SKN   +E +
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +    + +GV PD   YN++IS    E   E
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 284/578 (49%), Gaps = 28/578 (4%)

Query: 72  KSPKLALEFYTWVGEN-NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           K  KL  E     G N NRF+++     A++          D  +  GN+  A  +    
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYT-----ALI----------DGFIKEGNIEEALRIKDEM 372

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
              GL       K     ++A++    + G    A  +  ++ + G       +N  +  
Sbjct: 373 ITRGL-------KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
            +K +++ +  +L  EM +     +  T++++I  LC    L++A  +  +M+++G+ PN
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  +  +I    Q    E A++L +   +M  + VLP+   +NC+I G C+  +VE A+ 
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLK---IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M + GI  N  TY   I+ Y++ G  + A R   +M+  G++PNNV+Y   I    
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+   AL     M++K + PD   YS +   L +NG  K+A  +  + L+  +V D +
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID--GYCKGGNIEGAVQVYE 488
            YN LI+  CK  ++  A QL   M+  G+ P+I+ Y TLI+  GYCK GN+  A ++++
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGK 548
            M      P+  IY  +I+G  K+ +L+ A SL   +Q+  +     +N+LI+ +  +GK
Sbjct: 723 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGK 782

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA  +F +M +  +  N V Y ILI+   K    ++A +L   M    IIP+ +TYT+
Sbjct: 783 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 842

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           L+  +++  +  ++I L  DM   G++ D   Y  + S
Sbjct: 843 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 880



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 261/532 (49%), Gaps = 21/532 (3%)

Query: 131 FLEGLLDSYEICKA--------------TPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
            ++G L S+++ KA              +P  +  L+         + A +V+ ++   G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
              ++  +   +   V+ +      +L K M++ G + ++  +N +I  LC+  K+EEA 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            L   M + GI PN   +   IN   + G+++ A + F+ M + SG  ++PN+V +  +I
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM-LSSG--IVPNNVIYTILI 598

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            G C +G    A      M++ G+  ++R Y+ +I   ++ G ++EA+ +  + +K G++
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK--GLCRNGCVKQAF 414
           P+  +YNS I     EGD+E A  +  +M+   I P+   Y+ L    G C++G + +AF
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAF 718

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           KL ++++ + +  D Y Y ILI+   K  NL  A  L      +  +  +  + +LID +
Sbjct: 719 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSF 777

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL-LQASQRIGLLDA 533
           CK G +  A +++++M   +  PN+V Y  +I+   K   ++ A+ L L    R  + + 
Sbjct: 778 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 837

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TY +L+  Y   G   +  ++F +M   GIA + + Y ++ +  CK G   +A +L+  
Sbjct: 838 LTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNK 897

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            ++ GI  +   +  L+    K      V+EL  +M    +S  ++T N ++
Sbjct: 898 SLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 949



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 253/548 (46%), Gaps = 26/548 (4%)

Query: 121 MSANSVSPLEF-----LEGLLDSYEICKAT------------PAVF--DALVRACTQIGA 161
           M A  ++P  F     + GL  S ++ KA             P VF    L++A  Q   
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            E A ++++ +   G    +  +N  +  L +  ++     L  +M   G   N +T+  
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
            I    K  +++ A   +  ML SGI PN V + ++I   C VG+   AL  F+    M 
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK---CML 618

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              ++P+   ++ II+   K G+ + A  +    +K G+  +V  Y +LI G+ + G  E
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTI--HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
           +A +L DEM+  G+ PN VVYN+ I  +     G++  A  +  +MI K I PD + Y I
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 738

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G  + G +++A  L ++  ++  VG   ++N LI+  CK   +  A++L   M+ + 
Sbjct: 739 LIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 797

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L P+I+TY  LID Y K   +E A Q++ +M+     PN + Y S++    +  +     
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           SL +  +  G+  DAI Y  + + Y   GK  EA  + ++    GI +    ++ LI  L
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 917

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK        EL+  M    +     T  TL+  F K+ + +E  ++   M   G  P +
Sbjct: 918 CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 977

Query: 639 QTYNAIIS 646
            +    IS
Sbjct: 978 LSLTDSIS 985



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 163/308 (52%), Gaps = 2/308 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MV+  ++P+   Y + I      GDV     VLS+M +K   P+ FTY+    GLC+ G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA 291

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V +A ++   ++E+ +  D ++Y +L++  CK      AK +  SM   GL P+  TY  
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+ K GNIE A+++ + M     K N+V YN++I G+ K   +  A SL       G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D  TYN LI+GY  +  +A+A  + +EM+   +  +   Y++LI+ LC     Q+A 
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           E++  MI +G+ P+   Y TL+  + +    E  IEL   M+ +GV PD   YN +I  L
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 649 LGEKSAED 656
              K  E+
Sbjct: 532 CRAKKVEE 539



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 251/516 (48%), Gaps = 24/516 (4%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
            ++   V   R++ A+ L+  +M AN V P  F                 ++ L+    +
Sbjct: 491 TLIKAYVQESRYEMAIELL-KIMIANGVLPDLF----------------CYNCLIIGLCR 533

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
               E A  ++  +  KG   + H +  F++   K  EI    + +K+M+S G V N   
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           + ++I   C      EALS +  ML+ G+ P++  ++ II+   + G  + A+ +F K  
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF- 652

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID--GYAR 336
           + +G  V+P+   +N +I+GFCK G +E A ++   M+  GI+ N+  Y TLI+  GY +
Sbjct: 653 LKTG--VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCK 710

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G+  EA +L DEM+ +G+ P+  +Y   I     EG++E AL +  +   K +      
Sbjct: 711 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-A 769

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           ++ L    C++G V +A +L + ++++ +  +  +Y ILI+   K+  +  A+QL   M 
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            R +IP+ +TY +L+  Y + GN    + ++++M+      + + Y  + +  CK+    
Sbjct: 830 TRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSL 889

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  LL  S   G+ L+   ++ LI       +I+    + SEM    ++++    N L+
Sbjct: 890 EALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 949

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
               K G   +A +++ VM   G +P  ++ T  ++
Sbjct: 950 LGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 985



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 192/401 (47%), Gaps = 13/401 (3%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQ 170
            +L+ G+    N+V  L   + +L+   I    P +  + A++ + ++ G T+ A  V  
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLI----PDIRAYSAIIHSLSKNGKTKEAMGVFL 650

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI--YALCK 228
           K    G    +  +N+ +S   K  +I +  +LY EM+  G   N+  +N +I  Y  CK
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCK 710

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
              L EA  L+  M+  GI P+   + ++I+   + G+LE AL LF +    S  S+   
Sbjct: 711 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL--- 767

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
               N +I+ FCK G+V  A E+   M+   +  N+ TY  LID Y +    EEA +L  
Sbjct: 768 -SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 826

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +M  R ++PN + Y S +      G+    + +  DM  + I  D   Y ++    C+ G
Sbjct: 827 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 886

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
              +A KL N+ L E +  +   ++ LI +LCK   ++   +LLS M    L     T  
Sbjct: 887 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 946

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKP-NLVIYNSIING 508
           TL+ G+ K GN + A +V   M+++   P +L + +SI  G
Sbjct: 947 TLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTG 987


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/507 (31%), Positives = 275/507 (54%), Gaps = 14/507 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQ-KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           V  +L RA    G T  A ++ + ++   G + +I  +N  ++ L K N++G   +L++E
Sbjct: 7   VLQSLCRA----GDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE 62

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +V  G+  +V T+N +I +LCK   LEEA  L+  M   G  PNVV ++++IN  C+VG 
Sbjct: 63  LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--IDCNV 324
           ++ A +L ++M   S D VLPN +T+N  ++G CK      A E+  ++      +  + 
Sbjct: 123 IDEARELIQEMTRKSCD-VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T++TLIDG  + G  +EA  + D+M+  G +PN + YN+ ++ L     +E A  ++  
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH-----MVGDAYSYNILINYL 439
           M+DK + PD  TYS+L    C+   V +A +L + +         +V D  ++NILI   
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+ N   A  L   M+ + L PD++T+G LIDG CK G +E A  + + M  +   PN+
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN++++GLCK   ++ A   L+     G + D+ITY +L+       +  +A  + SE
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           +++ G   + V YNIL++ L K G  +QA  +++ M+  G  PD  T+    +   ++ +
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
               +EL   ++  G+ PD  T ++I+
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSIL 508



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 251/479 (52%), Gaps = 14/479 (2%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYK-EMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           +  +N  L  L +  +  R  ++++ EM   G    + T+N +I  LCK   L   + L+
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +++ G  P+VV +N +I+  C+ GDLE A +L    G MS    +PN VT++ +ING 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLH---GDMSSRGCVPNVVTYSVLINGL 117

Query: 300 CKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM- 356
           CK+GR++ A E+   M +   D   N+ TY + +DG  +   + EA  L   +    L  
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 177

Query: 357 -PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+ V +++ I  L   G ++ A  V  DMI     P+  TY+ L  GLC+   +++A  
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG-----LIPDIITYGTL 470
           +   ++++ +  D  +Y++L++  CK++ +  A +LL  M  RG     L+PD +T+  L
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I G CK GN E A  ++E M     +P+++ + ++I+GLCK   ++AA+ +L     +G+
Sbjct: 298 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             + +TYN L++G   +G+I EA     EM + G   + + Y  L+  LC+      A +
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L+  +   G  PD VTY  LV    K+   E+ I + ++MV  G  PD+ T+ A  S L
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGL 476



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 236/454 (51%), Gaps = 14/454 (3%)

Query: 216 VNTFNLVIYALCKECKLEEALSLYY-RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           V  +N+V+ +LC+      AL ++   M + G+ P +V +N IIN  C+  DL   ++LF
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            ++ V  G    P+ VT+N +I+  CK G +E A  +   M   G   NV TY+ LI+G 
Sbjct: 61  EEL-VERGHH--PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGL 117

Query: 335 ARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HI 390
            + G  +EA  L  EM ++   ++PN + YNS +  L  +     A  ++  + D    +
Sbjct: 118 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 177

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  T+S L  GLC+ G + +A  + + ++    V +  +YN L+N LCK++ +  A  
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 237

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL-----VIYNSI 505
           ++ SM+ +G+ PD+ITY  L+D +CK   ++ A+++   M      PN+     V +N +
Sbjct: 238 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNIL 297

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I G CK  + + A +L +      L  D +T+  LI+G    G++  A  +   M N+G+
Sbjct: 298 IAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 357

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N V YN L++ LCK G  ++A + ++ M+  G +PD +TY +LV    +    ++ ++
Sbjct: 358 PPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           L  ++   G  PD  TYN ++  L      E  +
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAI 451



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 227/453 (50%), Gaps = 14/453 (3%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+ +L  A  +     L G + S   C      +  L+    ++G  + A ++IQ++  K
Sbjct: 78  LIDSLCKAGDLEEARRLHGDMSSRG-CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 136

Query: 176 GHSV--SIHAWNNFLSHLVKLNEIGRFWKLYKEMV--SCGYVENVNTFNLVIYALCKECK 231
              V  +I  +N+FL  L K +      +L + +   S     +  TF+ +I  LCK  +
Sbjct: 137 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 196

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++EA S++  M+  G  PNV+ +N ++N  C+   +E A  +   M V  G  V P+ +T
Sbjct: 197 IDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM-VDKG--VTPDVIT 253

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR-----TYATLIDGYARGGSSEEALRL 346
           ++ +++ FCK  RV+ A E+ + M   G   NV      T+  LI G  + G+ E+A  L
Sbjct: 254 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASAL 313

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EMV + L P+ + + + I  L   G VE A  +L  M +  + P+  TY+ L  GLC+
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +G +++A +   +++    V D+ +Y  L+  LC+++    A QL+S +   G  PD +T
Sbjct: 374 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 433

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  L+DG  K G  E A+ V E M     +P+   + +  +GL +  +L     LL+   
Sbjct: 434 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
             G+L DA T +++++    +GK+ +  AM  E
Sbjct: 494 AKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 272/539 (50%), Gaps = 38/539 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ALV+   + G  E A  ++ ++ + G       +NN +   +K     R   L  EM
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                V    T  ++I  LC+   +E+A  ++  M+  G+ PN V +  +I    Q G  
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+++ +   VM    V P+ + +N +I G CK  ++E A++    MI+ G+  NV TY
Sbjct: 498 QEAVRILK---VMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV-------------------------- 361
             LI GY + G  + A R   EM+  G+ PN+VV                          
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLG 614

Query: 362 ---------YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
                    Y++ IH L   G ++GA+ +LS+ ++K + PD FTY+ +  G C+ G + +
Sbjct: 615 RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGK 674

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF+LH  + ++ +  +  +YN LIN LCK+  +  A++L   +  +GL  + +TY T+ID
Sbjct: 675 AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           GYCK GN+  A ++++ M      P+  +Y+++I+G  K+ + + A SL   S + G   
Sbjct: 735 GYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS 794

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             + N L++G+  +GK+ EA  +  +M +  +  + V Y ILI++ CK G  ++A +   
Sbjct: 795 TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            M    ++P+ +TYT L++ ++      E+  L D+M+   + PD  T++ +I   L E
Sbjct: 855 DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKE 913



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 181/630 (28%), Positives = 313/630 (49%), Gaps = 24/630 (3%)

Query: 35  VFRAICVNLRQRKWK-ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHS 93
           +   I   L Q+ W+ +L  ++  L+  +V+ V+++    PK  L+F+ WV     FS  
Sbjct: 41  IVNEITTFLNQKNWESLLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQK 100

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA--------- 144
           L+S   +  +L N R F  A  ++  ++  +S    E L+ L+ S   CK          
Sbjct: 101 LQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKS---CKEFDLNNVNGN 157

Query: 145 -------TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
                     VF+ L+    + G  + A       K  G  V +   N  LS L+K N++
Sbjct: 158 ENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKL 217

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
             FW+ Y  M+    + +V T+  +I A  +    +E   L + M + G  P++V +N++
Sbjct: 218 ELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVV 277

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I   C+ G+++ A +L +   +M    ++ +  T++ +I+GF K  R   A+ +   M  
Sbjct: 278 IGGLCRAGEVDEAFELKK---LMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFS 334

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+      Y  LIDG+ R G S EA R+ +EM+ RG+  N   YN+ +  +   GD+E 
Sbjct: 335 KGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEK 394

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +L++MI   I PD  TY+ + +G  +     +   L +++ + ++V  AY+  ++IN
Sbjct: 395 ADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIIN 454

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+  ++  A ++   M+  G+ P+ + Y TLI G+ + G  + AV++ + M K   +P
Sbjct: 455 GLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP 514

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +++ YNS+I GLCK   ++ AK  L      GL   + TY  LI+GY  +G++  A   F
Sbjct: 515 DVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYF 574

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM   GIA N V    LI+  CK G   +A  + + M+   + PD  TY+ L+    +N
Sbjct: 575 KEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRN 634

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              +  +EL  + +  G+ PD  TYN+IIS
Sbjct: 635 GKLQGAMELLSEFLEKGLVPDVFTYNSIIS 664



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/577 (28%), Positives = 278/577 (48%), Gaps = 42/577 (7%)

Query: 116 LMGNLMSANSVSPL-EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           L+ +L+ AN +     F  G+L++  +       +  L+ A  + G  +    ++ +++ 
Sbjct: 207 LLSDLLKANKLELFWRFYNGMLEANVLHDVY--TYTHLINAHFRAGNAKEGKRLLFEMEE 264

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG S S+  +N  +  L +  E+   ++L K M   G V +V T++++I    K+ +  E
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  +   M   G+ P  V +  +I+   + GD   + + FR    M    V  N  T+N 
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQGD---SGEAFRVKEEMLARGVKLNLFTYNA 381

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY-------------------- 334
           ++ G CK G +E A+ +   MI  GI  + +TY  +I+GY                    
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSN 441

Query: 335 ---------------ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
                           R GS E+A R+ + MV  G+ PN V+Y + I     EG  + A+
Sbjct: 442 LVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAV 501

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L  M  K + PD   Y+ +  GLC++  +++A     +++E  +  + Y+Y  LI+  
Sbjct: 502 RILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGY 561

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CKS  +  A +    M+  G+ P+ +    LIDGYCK G+   A  ++  M      P++
Sbjct: 562 CKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDV 621

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
             Y+++I+GL ++  L  A  LL      GL+ D  TYN++I+G+   G I +AF +   
Sbjct: 622 RTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEY 681

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   GI+ N + YN LIN LCK G  ++AREL   +   G+  + VTY T++  + K+ +
Sbjct: 682 MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGN 741

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             +   L D+M L GV PD+  Y+A+I     E + E
Sbjct: 742 LSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 229/522 (43%), Gaps = 76/522 (14%)

Query: 198  GRFW---KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
            GRF    ++ K M   G   +V  +N VI  LCK  K+EEA      M++ G+ PNV  +
Sbjct: 495  GRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554

Query: 255  NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
              +I+  C+ G+++ A + F++M    G  + PN V    +I+G+CK G    A  I   
Sbjct: 555  GALIHGYCKSGEMQVADRYFKEM---LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRC 611

Query: 315  MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
            M+   +  +VRTY+ LI G  R G  + A+ L  E +++GL+P+   YNS I     +G 
Sbjct: 612  MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 375  VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            +  A  +   M  K I P+  TY+ L  GLC+ G +++A +L + +  + +  +A +Y  
Sbjct: 672  IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731

Query: 435  LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG--------------------- 473
            +I+  CKS NL+ A +L   M ++G+ PD   Y  LIDG                     
Sbjct: 732  IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791

Query: 474  -------------YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
                         +CK G +  A Q+ E+M     KP+ V Y  +I+  CK   L  A+ 
Sbjct: 792  FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQ 851

Query: 521  LLQASQRIGLL------------------------------------DAITYNTLINGYF 544
                 Q+  L+                                    D +T++ +I+ + 
Sbjct: 852  FFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHL 911

Query: 545  INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
              G   +   +  +M   G  V+K   ++LI+ LC+     +  ++++ +   G+     
Sbjct: 912  KEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLA 971

Query: 605  TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            T +TLV  F K    +    +   MV     PD+   N +I+
Sbjct: 972  TCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 216/484 (44%), Gaps = 73/484 (15%)

Query: 163  EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN------- 215
            E A D + ++  +G   +++ +   +    K  E+    + +KEM+ CG   N       
Sbjct: 533  EEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTAL 592

Query: 216  ----------------------------VNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
                                        V T++ +I+ L +  KL+ A+ L    L+ G+
Sbjct: 593  IDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGL 652

Query: 248  WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
             P+V  +N II+  C+ G +  A +L      M    + PN +T+N +ING CK G +E 
Sbjct: 653  VPDVFTYNSIISGFCKQGGIGKAFQLHE---YMCQKGISPNIITYNALINGLCKAGEIER 709

Query: 308  AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
            A E+   +   G+  N  TYAT+IDGY + G+  +A RL DEM  +G+ P++ VY++ I 
Sbjct: 710  ARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALID 769

Query: 368  WLFAEGDVEGALFV----------------------------------LSDMIDKHICPD 393
                EG+ E AL +                                  L DM+DKH+ PD
Sbjct: 770  GCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPD 829

Query: 394  HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
            H TY+IL    C+ G +K+A +    + + +++ +A +Y  L++    +   +    L  
Sbjct: 830  HVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFD 889

Query: 454  SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
             MI + + PD +T+  +ID + K G+    +++ ++M K     +  + + +I+ LC+  
Sbjct: 890  EMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKE 949

Query: 514  SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
             +     +L+  +  GL L   T +TL+  +   GK+  A  +   M       +    N
Sbjct: 950  HVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELN 1009

Query: 573  ILIN 576
             LIN
Sbjct: 1010 DLIN 1013



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 206/449 (45%), Gaps = 13/449 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRM--LKSGIWPNVVCFNMIINEACQVGDLE 268
           G+ + + +F+++   LC       A S+  +M  + SG +  ++  + +I ++C+  DL 
Sbjct: 96  GFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEIL--DSLI-KSCKEFDLN 152

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
                        G       V    +I+G+ K G  + A        + G    +    
Sbjct: 153 NVNGNENSNNNDRG-------VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCN 205

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+    +    E   R  + M++  ++ +   Y   I+  F  G+ +    +L +M +K
Sbjct: 206 GLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEK 265

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P   TY+++  GLCR G V +AF+L   + ++ +V D ++Y+ILI+   K      A
Sbjct: 266 GCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEA 325

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K +L  M  +GL P  + Y  LIDG+ + G+   A +V E M     K NL  YN+++ G
Sbjct: 326 KLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKG 385

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +CK   ++ A +LL     +G+  D  TYN +I GY      +    + SEM+   +   
Sbjct: 386 VCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPT 445

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
                ++IN LC+ G  + A  + ++M+  G+ P+ V YTTL+    +    +E + +  
Sbjct: 446 AYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILK 505

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            M   GV PD   YN++I  L   +  E+
Sbjct: 506 VMDKKGVQPDVLCYNSVIIGLCKSRKMEE 534



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/313 (21%), Positives = 136/313 (43%), Gaps = 39/313 (12%)

Query: 160  GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
            G    A+ +  ++ +KG       ++  +    K     +   L+ E V  G+  + ++ 
Sbjct: 740  GNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA-STSSL 798

Query: 220  NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            N ++   CK  K+ EA  L   M+   + P+ V + ++I+  C+ G L+ A + F  M  
Sbjct: 799  NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDM-- 856

Query: 280  MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                +++PN++T+  +++G+   GR      +   MI   I+ +  T++ +ID + + G 
Sbjct: 857  -QKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGD 915

Query: 340  SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
              + L+L D+M+K+G                  G+V            K++C       +
Sbjct: 916  HVKTLKLVDDMLKKG------------------GNVS-----------KNVC------HV 940

Query: 400  LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
            L   LCR   V +  K+  ++ E+ +     + + L+    K+  +  A ++L SM+   
Sbjct: 941  LIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFK 1000

Query: 460  LIPDIITYGTLID 472
             +PD      LI+
Sbjct: 1001 WVPDSTELNDLIN 1013



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 69/323 (21%), Positives = 123/323 (38%), Gaps = 48/323 (14%)

Query: 99   AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL-DSYEICKATPAVFDALVRACT 157
             + H  V +    D     GNL  A  +     L+G+  DS+        V+ AL+  C 
Sbjct: 721  GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSF--------VYSALIDGCR 772

Query: 158  QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
            + G TE A  +  +   KG + S  + N  +    K  ++    +L ++MV      +  
Sbjct: 773  KEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831

Query: 218  TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            T+ ++I   CK   L+EA   +  M K  + PN + +  +++     G       LF +M
Sbjct: 832  TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891

Query: 278  GVMSGDSVLPNSVTHNCIINGFCKLG--------------------------------RV 305
                   + P+ VT + +I+   K G                                R 
Sbjct: 892  ---IAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRK 948

Query: 306  EFAEEIRYAMIK---AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
            E   E+   + K    G++ ++ T +TL+  + + G  + A R+   MV+   +P++   
Sbjct: 949  EHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTEL 1008

Query: 363  NSTIHWLFAEGDVEGALFVLSDM 385
            N  I+      D E A   L  M
Sbjct: 1009 NDLINVEQDSTDSENAGDFLKQM 1031


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 190/632 (30%), Positives = 311/632 (49%), Gaps = 17/632 (2%)

Query: 33  DIVFRAICVNLRQRKWKIL-------EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVG 85
           D   R   + L+++ W+IL        ++ P +  S++ +  SE   S +L   F+ W  
Sbjct: 55  DDTVREFSMILKRKDWQILLNNEDNVRKLNPEIVCSVLQK--SEIDDSVRLQ-NFFYWSS 111

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EICKA 144
                   L S   +   L N      A  ++  L+      PLE L+ L+  Y E   +
Sbjct: 112 SKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRK-PPLEILDSLVRCYREFGGS 170

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
              VFD  +     +G    A  V      +G   ++   NN +  L+K N +G FWK+Y
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             MV    V +V T+  VI A CK   + +   +   M K    PN+  +N  I   CQ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQT 289

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G ++ AL++ +   +M    + P+  T+  +++GFCK  R + A+ I  +M  +G++ N 
Sbjct: 290 GAVDEALEVKK---LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LIDG+ + G+ EEALR+ DEM+ RGL  N V YN+ I  +   G++  A+ + ++
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+   + PD +TY++L  G  ++  + +A +L  ++    +    ++Y++LI+ LC S++
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A ++L  MI  G+ P++  YGTLI  Y +    E A+++ + M      P+L  YN 
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I GLC+   ++ AK LL      G+  +A TY   IN Y  +G+I  A   F +M + G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I  N V Y ILI   C  G   +A    K M+  G+IPD   Y+ ++   SKN   +E +
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +    + +GV PD   YN++IS    E   E
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/611 (26%), Positives = 291/611 (47%), Gaps = 61/611 (9%)

Query: 72  KSPKLALEFYTWVGEN-NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           K  KL  E     G N NRF+++     A++          D  +  GN+  A  +    
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYT-----ALI----------DGFIKEGNIEEALRIKDEM 372

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
              GL       K     ++A++    + G    A  +  ++ + G       +N  +  
Sbjct: 373 ITRGL-------KLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
            +K +++ +  +L  EM +     +  T++++I  LC    L++A  +  +M+++G+ PN
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  +  +I    Q    E A++L +   +M  + VLP+   +NC+I G C+  +VE A+ 
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLK---IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKM 542

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY-------- 362
           +   M + GI  N  TY   I+ Y++ G  + A R   +M+  G++PNNV+Y        
Sbjct: 543 LLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHC 602

Query: 363 ---------------------------NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
                                      ++ IH L   G  + A+ V    +   + PD F
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+ L  G C+ G +++A +L++++L   +  +   YN LIN LCK   +  A++L   +
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI 722

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
             + L+PD++TY T+IDGYCK GN+  A ++++ M      P+  IY  +I+G  K+ +L
Sbjct: 723 EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 782

Query: 516 DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
           + A SL   +Q+  +     +N+LI+ +  +GK+ EA  +F +M +  +  N V Y ILI
Sbjct: 783 EKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 842

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           +   K    ++A +L   M    IIP+ +TYT+L+  +++  +  ++I L  DM   G++
Sbjct: 843 DAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIA 902

Query: 636 PDNQTYNAIIS 646
            D   Y  + S
Sbjct: 903 CDAIAYGVMAS 913



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 270/564 (47%), Gaps = 52/564 (9%)

Query: 131 FLEGLLDSYEICKA--------------TPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
            ++G L S+++ KA              +P  +  L+         + A +V+ ++   G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
              ++  +   +   V+ +      +L K M++ G + ++  +N +I  LC+  K+EEA 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            L   M + GI PN   +   IN   + G+++ A + F+ M + SG  ++PN+V +  +I
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM-LSSG--IVPNNVIYTILI 598

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            G C +G    A      M++ G+  ++R Y+ +I   ++ G ++EA+ +  + +K G++
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+  +YNS I     EGD+E A  +  +M+   I P+   Y+ L  GLC+ G V +A +L
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +++ E+ +V D  +Y+ +I+  CKS NL  A +L   MI +G+ PD   Y  LIDG  K
Sbjct: 719 FDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 778

Query: 477 GGNIEGAVQVYENMKK--------------------------------VEKK--PNLVIY 502
            GN+E A+ ++   ++                                V+KK  PN+V Y
Sbjct: 779 EGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838

Query: 503 NSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +I+   K   ++ A+ L L    R  + + +TY +L+  Y   G   +  ++F +M  
Sbjct: 839 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            GIA + + Y ++ +  CK G   +A +L+   ++ GI  +   +  L+    K      
Sbjct: 899 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIST 958

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
           V+EL  +M    +S  ++T N ++
Sbjct: 959 VLELLSEMGKEELSLSSKTCNTLL 982



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 263/549 (47%), Gaps = 22/549 (4%)

Query: 99   AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
             ++   V   R++ A+ L+  +M AN V P  F                 ++ L+    +
Sbjct: 491  TLIKAYVQESRYEMAIELL-KIMIANGVLPDLF----------------CYNCLIIGLCR 533

Query: 159  IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
                E A  ++  +  KG   + H +  F++   K  EI    + +K+M+S G V N   
Sbjct: 534  AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 219  FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            + ++I   C      EALS +  ML+ G+ P++  ++ II+   + G  + A+ +F K  
Sbjct: 594  YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF- 652

Query: 279  VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            + +G  V+P+   +N +I+GFCK G +E A ++   M+  GI+ N+  Y TLI+G  + G
Sbjct: 653  LKTG--VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLG 710

Query: 339  SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
               +A  L DE+ ++ L+P+ V Y++ I      G++  A  +  +MI K I PD + Y 
Sbjct: 711  EVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 770

Query: 399  ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            IL  G  + G +++A  L ++  ++  VG   ++N LI+  CK   +  A++L   M+ +
Sbjct: 771  ILIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDK 829

Query: 459  GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
             L P+I+TY  LID Y K   +E A Q++ +M+     PN + Y S++    +  +    
Sbjct: 830  KLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM 889

Query: 519  KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             SL +  +  G+  DAI Y  + + Y   GK  EA  + ++    GI +    ++ LI  
Sbjct: 890  ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFH 949

Query: 578  LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            LCK        EL+  M    +     T  TL+  F K+ + +E  ++   M   G  P 
Sbjct: 950  LCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPT 1009

Query: 638  NQTYNAIIS 646
            + +    IS
Sbjct: 1010 SLSLTDSIS 1018



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 163/308 (52%), Gaps = 2/308 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MV+  ++P+   Y + I      GDV     VLS+M +K   P+ FTY+    GLC+ G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA 291

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V +A ++   ++E+ +  D ++Y +L++  CK      AK +  SM   GL P+  TY  
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+ K GNIE A+++ + M     K N+V YN++I G+ K   +  A SL       G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D  TYN LI+GY  +  +A+A  + +EM+   +  +   Y++LI+ LC     Q+A 
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           E++  MI +G+ P+   Y TL+  + +    E  IEL   M+ +GV PD   YN +I  L
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 649 LGEKSAED 656
              K  E+
Sbjct: 532 CRAKKVEE 539



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 179/366 (48%), Gaps = 7/366 (1%)

Query: 146  PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            P VF  ++L+    + G  E A  +  ++   G + +I  +N  ++ L KL E+ +  +L
Sbjct: 659  PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718

Query: 204  YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
            + E+     V +V T++ +I   CK   L EA  L+  M+  GI P+   + ++I+   +
Sbjct: 719  FDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 778

Query: 264  VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
             G+LE AL LF +    S  S+       N +I+ FCK G+V  A E+   M+   +  N
Sbjct: 779  EGNLEKALSLFHEAQQKSVGSL----SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPN 834

Query: 324  VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
            + TY  LID Y +    EEA +L  +M  R ++PN + Y S +      G+    + +  
Sbjct: 835  IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 894

Query: 384  DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            DM  + I  D   Y ++    C+ G   +A KL N+ L E +  +   ++ LI +LCK  
Sbjct: 895  DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 954

Query: 444  NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP-NLVIY 502
             ++   +LLS M    L     T  TL+ G+ K GN + A +V   M+++   P +L + 
Sbjct: 955  QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014

Query: 503  NSIING 508
            +SI  G
Sbjct: 1015 DSISTG 1020


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 185/618 (29%), Positives = 297/618 (48%), Gaps = 43/618 (6%)

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLV--NWRRFDDALL--LMGNLMSANSVSPLEF 131
           L L F+ W     R   SLE+ C I+H+ V  N  R    L+     N      V   +F
Sbjct: 118 LVLAFFDWA--RVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQF 175

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
              L+ +Y+     P  FD   +   +IG    A  ++ KL   G  V++ + N FLS +
Sbjct: 176 THRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRI 235

Query: 192 VKLNE-IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
              +E I    K++ E    G   N  ++N++IY+LC+  K++EA  L  +M      P+
Sbjct: 236 ANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPD 292

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGV------------------------------- 279
           VV ++ +I+  C +G+L+ ALKL   M +                               
Sbjct: 293 VVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLR 352

Query: 280 -MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M    ++P++V +  +I+GF KLG V  A +    M+   I  +  TY TLI G+ +GG
Sbjct: 353 EMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGG 412

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              E   L  EM+ RGL P+ V Y + I      G++  A  + ++M+   + P+  TY 
Sbjct: 413 KVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYG 472

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC++G +  A +L +++ ++ +  +   YN ++N +CK+ N+  A +L+  M V 
Sbjct: 473 ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA 532

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD ITY T+ID YC+ G+I+ A ++ + M     +P +V +N ++NG C    L+  
Sbjct: 533 GIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG 592

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL      G++ DAITYNTL+  + I   +     ++  MRN G+A +   YNILI  
Sbjct: 593 DRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG 652

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            CK    ++A  L K MI  G +P   +Y  L+ RF K     E  EL ++M   G+  D
Sbjct: 653 HCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVAD 712

Query: 638 NQTYNAIISPLLGEKSAE 655
            + YN  +     E   E
Sbjct: 713 GEIYNFFVDMCYEEGDVE 730



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 135/281 (48%), Gaps = 5/281 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +  + AL+    + G  + A +++ +++ KG  +++  +N+ ++ + K   I +  K
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L KEM   G   +  T+  VI A C+   +++A  L   ML  G+ P VV FN+++N  C
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G LE   +L   +G M    ++P+++T+N ++   C    +    +I   M   G+  
Sbjct: 585 MLGMLEDGDRL---LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY  LI G+ +  + +EA  L  EM+++G +P    YN+ I   + +     A  + 
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELF 701

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
            +M    +  D   Y+         G V+    L ++ +E+
Sbjct: 702 EEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 186/628 (29%), Positives = 300/628 (47%), Gaps = 43/628 (6%)

Query: 66  VVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV--NWRRFDDALL--LMGNLM 121
           V+   +    L L F+ W     R   SLE+ C I+H+ V  N  R    L+     N  
Sbjct: 108 VLMNIKNDYNLVLAFFDWA--RVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSK 165

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
               V   +F   L+ +Y+     P  FD   +   +IG    A  ++ KL   G  V++
Sbjct: 166 LEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTV 225

Query: 182 HAWNNFLSHLVKLNE-IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
            + N FLS +   +E I    K++ E    G   N  ++N++IY+LC+  K++EA  L  
Sbjct: 226 DSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLM 282

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV--------------------- 279
           +M      P+VV ++ +I+  C +G+L+ ALKL   M +                     
Sbjct: 283 QMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIG 342

Query: 280 -----------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
                      M    ++P++V +  +I+GF KLG V  A +    M+   I  +  TY 
Sbjct: 343 KSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYT 402

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI G+ +GG   E   L  EM+ RGL P+ V Y + I      G++  A  + ++M+  
Sbjct: 403 TLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM 462

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+  TY  L  GLC++G +  A +L +++ ++ +  +   YN ++N +CK+ N+  A
Sbjct: 463 GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQA 522

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L+  M V G+ PD ITY T+ID YC+ G+I+ A ++ + M     +P +V +N ++NG
Sbjct: 523 IKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNG 582

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C    L+    LL      G++ DAITYNTL+  + I   +     ++  MRN G+A +
Sbjct: 583 FCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD 642

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              YNILI   CK    ++A  L K MI  G +P   +Y  L+ RF K     E  EL +
Sbjct: 643 SNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFE 702

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +M   G+  D + YN  +     E   E
Sbjct: 703 EMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 136/281 (48%), Gaps = 5/281 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +  + AL+    + G  + A +++ +++ KG  +++  +N+ ++ + K   I +  K
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L KEM   G   +  T+  VI A C+   +++A  L   ML  G+ P VV FN+++N  C
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G LE   +L   +G M    ++P+++T+N ++   C    +    +I   M   G+  
Sbjct: 585 MLGMLEDGDRL---LGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAP 641

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY  LI G+ +  + +EA  L  EM+++G +P    YN+ I   + +  +  A  + 
Sbjct: 642 DSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELF 701

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
            +M    +  D   Y+         G V+    L ++ +E+
Sbjct: 702 EEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 199/709 (28%), Positives = 329/709 (46%), Gaps = 70/709 (9%)

Query: 1   MFSAFCNCLYKSNSPLS-RAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQ---MAP 56
           M+   C        P+S +A       A    ED V R I   L    W+ L +   +  
Sbjct: 1   MWRLTCRSFMAKPRPISHKAASFSSSQALTQNEDSV-REITTLLNSHNWQALMESSDIPK 59

Query: 57  SLTNSLVNRVVSEFR-KSPKLALEFYTWVGE---NNRFSHSLESSCAIVHLLVNWRRFDD 112
            L   ++  V+ + +   PK  L F+ W       +     L+   A+   L N   +  
Sbjct: 60  KLNTDIIRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGP 119

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQ 170
           A  L+  ++  NS SPL  L  ++  Y  C  +P   +FD L+ +  ++G    A +V  
Sbjct: 120 ASDLIKCIIR-NSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFL 178

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY-------------------------- 204
             K      S+ + N+ L  L+K N++  FWK++                          
Sbjct: 179 GPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVG 238

Query: 205 --------------------------KEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
                                     + MV  G V ++ T++++I   C E +  EA  +
Sbjct: 239 NVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 298

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
              M+  G+ P  + +N +I+   + GD+E A   FR    M    +  N +  N ++NG
Sbjct: 299 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQA---FRIKDEMVACGIEANLIIWNTLLNG 355

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK G++E A EI   M++ G++ + +TY+ LI+G+ RG +   A  L DEM KR L P 
Sbjct: 356 VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 415

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            + Y+  I+ L   G+++G   +L +M+   + P+   Y+ L     + G V+++  +  
Sbjct: 416 VLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE 475

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ E+ ++ D + YN LI   CK+  +  A+  L  M+ R L P+  TYG  IDGY K G
Sbjct: 476 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 535

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITY 536
            +E A + +  M      PN+ IY ++I G CK+ ++  A S+ +   S+R+ L D  TY
Sbjct: 536 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV-LQDVQTY 594

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + LI+G   NGK+ EAF +FSE++  G+  N   YN LI+  CK G   +A +L++ M +
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            GI PD VTY  L+    K    E    L DD+   G++P+  TY A++
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 266/571 (46%), Gaps = 69/571 (12%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K  P  ++AL+    + G  E A+ +  ++   G   ++  WN  L+ + K  ++ +  +
Sbjct: 308 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 367

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + +EM+  G   +  T++L+I   C+   +  A  L   M K  + P V+ +++IIN  C
Sbjct: 368 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 427

Query: 263 QVGDLEFALKLFRKMGVMSG---------------------------------DSVLPNS 289
           + G+L+    + R+M VM+G                                   +LP+ 
Sbjct: 428 RCGNLQGTNAILREM-VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
             +N +I GFCK  R+E A      M++  +  N  TY   IDGY++ G  E A R  +E
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  G++PN  +Y + I     EG+V  A  V   ++ + +  D  TYS+L  GL RNG 
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           + +AF + +++ E+ ++ +A++YN LI+  CK  N+  A QLL  M ++G+ PDI+TY  
Sbjct: 607 MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 666

Query: 470 LI-----------------------------------DGYCKGGNIEGAVQVYENMKKVE 494
           LI                                   DGYCK  N   A Q+ E M    
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
             P+  IYN I+N  CK+   + A  L Q     G    +++NTLI GY  +GK+ EA  
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANH 786

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  EM       N V Y  LI+  CK G   +A+ L   M    ++P   TYT+L+  + 
Sbjct: 787 LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYH 846

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              +  EV  L ++MV  G+ PD  TY  +I
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 877



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 254/524 (48%), Gaps = 44/524 (8%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQ 170
           +LL+ G+    N     E    LLD  +  K  P V  +  ++    + G  +G   +++
Sbjct: 385 SLLIEGHCRGQNMARAFE----LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 440

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++ + G   +   +   ++   K   +     + + M   G + +V  +N +I   CK  
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 500

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++EEA +    ML+  + PN   +   I+   + G++E A + F +M +  G  VLPN  
Sbjct: 501 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM-LSCG--VLPNVG 557

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +  +I G CK G V  A  +   ++   +  +V+TY+ LI G +R G   EA  +  E+
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            ++GL+PN   YNS I     +G+V+ A  +L +M  K I PD  TY+IL  GLC+ G +
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD------- 463
           ++A  L + +    +  +  +Y  +++  CKS N  AA QLL  M++RG+ PD       
Sbjct: 678 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737

Query: 464 ---------------------------IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
                                       +++ TLI+GYCK G ++ A  + E M + +  
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 797

Query: 497 PNLVIYNSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
           PN V Y S+I+  CK   +  AK L L+  +R  +  A TY +L++GY   G ++E  A+
Sbjct: 798 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           F EM   GI  +K+ Y ++I+  C+ G   +A +L   +++ G+
Sbjct: 858 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 901



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 222/439 (50%), Gaps = 17/439 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + A +   ++ G  E A     ++   G   ++  +   +    K   +   + +++ +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S   +++V T++++I+ L +  K+ EA  ++  + + G+ PN   +N +I+ +C+ G++
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A +L  +M +     + P+ VT+N +I+G CK G +E A+ +   +   G+  N  TY
Sbjct: 643 DKASQLLEEMCI---KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           A ++DGY +  +   A +L +EM+ RG+ P+  +YN  +++   E   E AL +  +M++
Sbjct: 700 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 759

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K       +++ L +G C++G +++A  L  +++E+  + +  +Y  LI++ CK+  +  
Sbjct: 760 KGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 818

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK+L   M  R ++P   TY +L+ GY   GN+     ++E M     +P+ + Y  +I+
Sbjct: 819 AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 878

Query: 508 GLCKDASLDAAKSL----------LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
             C++ ++  A  L          +++  R+GL    T + +  G+ I G + EA  +  
Sbjct: 879 AYCREGNVMEACKLKDEILVKGMPMKSGFRLGL---PTCSVIARGFQIAGNMDEAAEVLR 935

Query: 558 EMRNVGIAVNKVGYNILIN 576
            M   G   N      L++
Sbjct: 936 SMVKFGWVSNTTSLGDLVD 954



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 175/352 (49%), Gaps = 18/352 (5%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N   +  L+D Y + G   EA+ +          P+ +  NS +  L     VE    V 
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVK-----------------QAFKLHNQVLEEHM 425
             M    + PD +TY+ +    C+ G VK                 +A +L   ++++ +
Sbjct: 213 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGL 272

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
           V D Y+Y+ILIN  C       AK +L  MI  GL P+ ITY  LIDG+ + G+IE A +
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 332

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           + + M     + NL+I+N+++NG+CK   ++ A  ++Q     G+  D+ TY+ LI G+ 
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 392

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
               +A AF +  EM+   +A   + Y+++IN LC+ G  Q    +++ M+++G+ P+ V
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 452

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            YTTL+T  +K    EE   + + M   G+ PD   YN++I      K  E+
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEE 504



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 168/349 (48%), Gaps = 10/349 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+    + G  + A  +++++ +KG +  I  +N  +  L K  EI R   L+ ++
Sbjct: 628 TYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI 687

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N  T+  ++   CK      A  L   ML  G+ P+   +N+I+N  C+    
Sbjct: 688 EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKF 747

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL LF++M     +    ++V+ N +I G+CK G+++ A  +   MI+     N  TY
Sbjct: 748 EKALDLFQEML----EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LID   + G   EA RL  EM +R +MP    Y S +H     G++     +  +M+ 
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA------YSYNILINYLCK 441
           K I PD  TY ++    CR G V +A KL +++L + M   +       + +++      
Sbjct: 864 KGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQI 923

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           + N+  A ++L SM+  G + +  + G L+DG   G N E +  + + M
Sbjct: 924 AGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/521 (31%), Positives = 269/521 (51%), Gaps = 6/521 (1%)

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           S L+ +  LL S    +  P VFD L+R  TQ      A++  + L      +   A N 
Sbjct: 72  SRLDIVSSLLASSPTPQ--PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNA 129

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            L+ L +          Y+ ++S     N  T N+++++ CK  +  E  ++   M K  
Sbjct: 130 LLAALSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRC 189

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           ++P+VV  N++++   + GD+E A+ L   M V  G  + P  VT+N ++ G  + GR +
Sbjct: 190 VFPDVVTHNVMVDARFRAGDVEAAMALIDSM-VSKG--IKPGLVTYNSVLKGLLRNGRWD 246

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A E+  AM   G+  +VR++  LI G+ R G  EEALR   EM  R + P+ V ++  I
Sbjct: 247 KAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI 306

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
                 G+++ A   L +M +  + PD   Y+++  G CR G + +A ++ ++++    +
Sbjct: 307 GLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCL 366

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +YN L+N LCK   L+ A++LL+ M  RG+ PD+ T+ TLI GYC+ GNIE A+Q 
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFI 545
           ++ +     +P++V YN++I+G+C+   L  A  L      R    + +TY+ LI+ +  
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCE 486

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G++  AFA   EM N GI  N + YN +I   C+ G   + ++ +  M    ++PD +T
Sbjct: 487 KGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLIT 546

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           Y TL+  + K     E   L   M    V PD  TYN IIS
Sbjct: 547 YNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIIS 587



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 240/438 (54%), Gaps = 4/438 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   MVS G    + T+N V+  L +  + ++A  ++  M   G+ P+V  FNM+I   C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+LE AL+ +++M    G  V P+ V+ +C+I  F + G ++ A E    M + G+  
Sbjct: 276 RAGELEEALRFYKEM---RGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMP 332

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +   Y  +I G+ R G   EALR+ DEMV  G +P+ V YN+ ++ L  E  +  A  +L
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M ++ + PD  T++ L  G CR+G +++A +  + + ++ +  D  +YN LI+ +C+ 
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQ 452

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +L  A +L   M  R + P+ +TY  LID +C+ G ++ A    + M      PN++ Y
Sbjct: 453 GDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTY 512

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NSII G C+  ++   +  L   +   ++ D ITYNTLI+GY   GK+ EAF +   M N
Sbjct: 513 NSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMEN 572

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +  + V YN++I+     G  Q+A  + K M   GI PD  TY +++       + ++
Sbjct: 573 ENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKK 632

Query: 622 VIELHDDMVLSGVSPDNQ 639
             +LHD+M+  G++PD++
Sbjct: 633 SFQLHDEMLQKGLAPDDK 650



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 228/451 (50%), Gaps = 33/451 (7%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           + +V A  + G  E A  +I  +  KG    +  +N+ L  L++     +  ++++ M +
Sbjct: 198 NVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDA 257

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
           CG   +V +FN++I   C+  +LEEAL  Y  M    + P+VV F+ +I    + G+++ 
Sbjct: 258 CGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDH 317

Query: 270 ALKLFRKM---GVMSGDSV-----------------------------LPNSVTHNCIIN 297
           A +  R+M   G+M    +                             LP+ VT+N ++N
Sbjct: 318 AAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLN 377

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK  R+  AEE+   M + G+  ++ T+ TLI GY R G+ E+AL+  D +  + L P
Sbjct: 378 GLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP 437

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + V YN+ I  +  +GD+  A  +  DM  + I P+H TYSIL    C  G V  AF   
Sbjct: 438 DIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFL 497

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           ++++ + +V +  +YN +I   C+S N++  +Q L  M    ++PD+ITY TLI GY K 
Sbjct: 498 DEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKE 557

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G +  A  + + M+    +P+ V YN II+G     ++  A  + +     G+  D  TY
Sbjct: 558 GKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTY 617

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            ++ING+ + G   ++F +  EM   G+A +
Sbjct: 618 MSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 121/230 (52%), Gaps = 1/230 (0%)

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           + Y+ NI+++  CK+        ++S M  R + PD++T+  ++D   + G++E A+ + 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           ++M     KP LV YNS++ GL ++   D A+ + +A    G+  D  ++N LI G+   
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G++ EA   + EMR   +  + V ++ LI    + G    A E ++ M   G++PD V Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           T ++  F +     E + + D+MV  G  PD  TYN +++ L  E+   D
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 162/503 (32%), Positives = 259/503 (51%), Gaps = 5/503 (0%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEG 134
           +L L F+ W  +  R S+ LE +  ++H L N +R+      + + +     +       
Sbjct: 59  ELVLRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHS 118

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           LL       AT  + D LV A  +      AY+   + K  G  +S+ + N  LS LVK 
Sbjct: 119 LLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKE 178

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           N+IG    +YKEM+      N+NTFN+ I  LC+  KL +A      M   GI PNVV +
Sbjct: 179 NKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTY 238

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +++  C+ G      K    M  M  + + PN VT N +I+GFCK   V  A++    
Sbjct: 239 NTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEE 298

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M K G+  N+ TY +LI+G    G  EEA+ L D+MV  GL PN V YN+ I+    +  
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  V  D+  + + P+  T++ +    C+ G +++ F L + +L+E ++ +  +YN 
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI  LC+  +L AAK+LL+ M  +GL  D++TY  LIDG CK      A ++   M  + 
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478

Query: 495 KKPNLVIYNSIINGLCKDASLDAA---KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
            KPN V YN++++G C +  L AA   ++ ++  ++    + +TYN LI GY    K+  
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQP--NVVTYNVLIKGYCKINKLEA 536

Query: 552 AFAMFSEMRNVGIAVNKVGYNIL 574
           A  + +EM   G+  N+  Y+I+
Sbjct: 537 ANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 161/302 (53%), Gaps = 4/302 (1%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM+KR +  N   +N  I+ L   G +  A   + DM    I P+  TY+ L  G C+ G
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249

Query: 409 CVKQAFKLH---NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
              + +K      ++L   +  +  ++N LI+  CK  N+AAAK+    M  +GL P+I+
Sbjct: 250 SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIV 309

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQA 524
           TY +LI+G C  G +E A+ +++ M  +  KPN+V YN++ING CK   + +A K     
Sbjct: 310 TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV 369

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           S++  + + IT+NT+I+ Y   G + E F++ S M + GI  N   YN LI  LC+    
Sbjct: 370 SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDL 429

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           Q A+EL+  M   G+  D VTY  L+    KN       +L ++M   G+ P++ TYN +
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTL 489

Query: 645 IS 646
           + 
Sbjct: 490 MD 491



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 145/280 (51%), Gaps = 7/280 (2%)

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           GDVE   +V  +MI + I  +  T++I   GLCR G + +A      +    +  +  +Y
Sbjct: 182 GDVE---YVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTY 238

Query: 433 NILINYLCK---SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           N L++  CK   +  +  A+  +  M+   + P+ +T+ TLIDG+CK  N+  A + +E 
Sbjct: 239 NTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEE 298

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M+K   KPN+V YNS+INGLC +  L+ A  L      +GL  + +TYN LING+     
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA  +F ++    +  N + +N +I+  CK G  ++   L   M+  GI+P+  TY  
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L+    +    +   EL ++M   G+  D  TYN +I  L
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 158/311 (50%), Gaps = 25/311 (8%)

Query: 363 NSTIHWLFAEGDVEGALFVLSDMI--------DKHICPDHFTYS-------------ILT 401
           +S  H L  +G   GA  ++ DM+        + H   + FT +              L 
Sbjct: 113 SSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLL 172

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
             L +   +     ++ ++++  +  +  ++NI IN LC++  L  A+  +  M   G+ 
Sbjct: 173 SALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGIS 232

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK---PNLVIYNSIINGLCKDASLDAA 518
           P+++TY TL+DGYCK G+     +    MK++      PN V +N++I+G CKD ++ AA
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAA 292

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K   +  Q+ GL  + +TYN+LING   NGK+ EA  ++ +M  +G+  N V YN LIN 
Sbjct: 293 KKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            CK    ++A ++   +    ++P+ +T+ T++  + K    EE   L   M+  G+ P+
Sbjct: 353 FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412

Query: 638 NQTYNAIISPL 648
             TYN +I+ L
Sbjct: 413 VSTYNCLIAGL 423



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 127/266 (47%), Gaps = 3/266 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     +++L+      G  E A D+  K+   G   +I  +N  ++   K   +    K
Sbjct: 305 KPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATK 364

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ ++     V NV TFN +I A CKE  +EE  SL   ML  GI PNV  +N +I   C
Sbjct: 365 VFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLC 424

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +  DL+ A +L  +M       +  + VT+N +I+G CK  +   AE++   M   G+  
Sbjct: 425 RKQDLQAAKELLNEM---ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY TL+DGY   G  + AL +   M K    PN V YN  I        +E A  +L
Sbjct: 482 NHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLL 541

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNG 408
           ++M++K + P+  TY I+   +   G
Sbjct: 542 NEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 110/243 (45%), Gaps = 8/243 (3%)

Query: 424 HMVGDAYSYNILINYLCK--SNNLAAAKQLLSSMIVRGLIP--DIITYGTLIDGYCKGGN 479
           H + ++  Y+ + ++L     N       +  S+++ G  P    +    L+  Y K   
Sbjct: 86  HFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLE 145

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNT 538
           +  A + +   K    K +L   N +++ L K+  + D      +  +R    +  T+N 
Sbjct: 146 LHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNI 205

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC---YQQARELMKVMI 595
            ING    GK+ +A     +M+  GI+ N V YN L++  CK G      +A   MK M+
Sbjct: 206 FINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEML 265

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            + I P+ VT+ TL+  F K+ +     +  ++M   G+ P+  TYN++I+ L      E
Sbjct: 266 ANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLE 325

Query: 656 DQV 658
           + +
Sbjct: 326 EAI 328


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/434 (34%), Positives = 238/434 (54%), Gaps = 4/434 (0%)

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
           +NV T+ ++I  LCK  +L EA + + +M K G  PN   +N++IN  C+V  +  A  L
Sbjct: 5   KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 64

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            ++M       + PN VT++ +I+GFC+  +V+ A ++   M++ G   N+ TY TL+ G
Sbjct: 65  LKEM---KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             R G  +EA  L DEM +RGL P+   Y++ +  L   G ++ AL V  D  +    PD
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              YS L  GLC+ G + +A KL  ++ E     D  ++  L++ LCK + L  A+Q+L 
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 241

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
           +M  R   P++ITY +LIDG CK G +  A +V++ M     +PN+V YNS+I+G C   
Sbjct: 242 TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTN 301

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D+A  L++     G L D ITYNTLI+G    G+  EA  +F +M+      + + Y+
Sbjct: 302 GVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYS 361

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI   CK      AR L   M+   ++PD VT++TLV  +      ++   L ++MV S
Sbjct: 362 CLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVAS 421

Query: 633 GVSPDNQTYNAIIS 646
             SPD  TY +++ 
Sbjct: 422 DCSPDVYTYTSLVD 435



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 260/487 (53%), Gaps = 4/487 (0%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K+K KG   +   +N  ++   K++++ R + L KEM   G   NV T++ VI+  C++ 
Sbjct: 32  KMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQT 91

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K++ A  L+ +M+++G  PN+V +N +++  C+ G ++ A +L  +M       + P+  
Sbjct: 92  KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM---RERGLQPDKF 148

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           +++ ++ G CK G+++ A ++           +V  Y+TLI G  + G  +EA +L ++M
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            +    P+ V + + +  L     ++ A  VL  M D++  P+  TYS L  GLC+ G V
Sbjct: 209 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 268

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           + A ++  +++   +  +  +YN LI+  C +N + +A  L+  M   G +PDIITY TL
Sbjct: 269 RDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTL 328

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDG CK G    A +++ +MK     P+++ Y+ +I G CK   +D A++L     +  +
Sbjct: 329 IDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 388

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           L D +T++TL+ GY   G + +A  +  EM     + +   Y  L++  CK G   +AR 
Sbjct: 389 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 448

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++K M   G  P+ VTYT L+  F +   P    +L ++MV +GV P+  TY ++I    
Sbjct: 449 VLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFC 508

Query: 650 GEKSAED 656
           G    E+
Sbjct: 509 GTGDLEE 515



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 261/518 (50%), Gaps = 6/518 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    + G  + AY+++ +++ +G      +++  ++ L K  +I    
Sbjct: 108 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 167

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++++  +     +V  ++ +I  LCK  +L+EA  L+ +M ++   P+VV F  +++  
Sbjct: 168 KVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   L+ A ++      M   +  PN +T++ +I+G CK G+V  A+E+   MI  GI+
Sbjct: 228 CKGDRLQEAQQVLE---TMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE 284

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY +LI G+      + AL L +EM   G +P+ + YN+ I  L   G    A  +
Sbjct: 285 PNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             DM  K   PD  TYS L  G C+   +  A  L + +L++ ++ D  +++ L+   C 
Sbjct: 345 FGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCN 404

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +  A++LL  M+     PD+ TY +L+DG+CK G +  A +V + M K   +PN+V 
Sbjct: 405 AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVT 464

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM- 559
           Y ++I+  C+      A  LL+     G+  + ITY +LI G+   G + EA  M   + 
Sbjct: 465 YTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           R+     +   Y ++++ LC+ G    A EL++ +   G  P +  Y  L+    +    
Sbjct: 525 RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 584

Query: 620 EEVIELHDDMVLSGVS-PDNQTYNAIISPLLGEKSAED 656
            + +E+ ++M LS  S P+ + Y A+I  L  E   E+
Sbjct: 585 GKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 622



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 255/538 (47%), Gaps = 40/538 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    ++     AY +++++K  G + ++  ++  +    +  ++   +KL+++M
Sbjct: 44  TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM 103

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN----------------- 250
           V  G + N+ T+N ++  LC+   ++EA  L   M + G+ P+                 
Sbjct: 104 VENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKI 163

Query: 251 ------------------VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
                             VV ++ +I   C+ G L+ A KLF KM     +S  P+ VT 
Sbjct: 164 DMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM---RENSCEPDVVTF 220

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             +++G CK  R++ A+++   M       NV TY++LIDG  + G   +A  +   M+ 
Sbjct: 221 TALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 280

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG+ PN V YNS IH       V+ AL ++ +M      PD  TY+ L  GLC+ G   +
Sbjct: 281 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 340

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   +  +    D  +Y+ LI   CK   +  A+ L   M+ + ++PD++T+ TL++
Sbjct: 341 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 400

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GYC  G ++ A ++ E M   +  P++  Y S+++G CK   +  A+ +L+   + G   
Sbjct: 401 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 460

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +TY  LI+ +   GK   A+ +  EM   G+  N + Y  LI   C  G  ++AR+++
Sbjct: 461 NVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKML 520

Query: 592 KVMIL-HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + +        D   Y  ++    +       +EL + +  SG  P +  Y A+I  L
Sbjct: 521 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 578



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 224/452 (49%), Gaps = 6/452 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+    + G  + A  + +K++       +  +   +  L K + +    
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 237

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++ + M       NV T++ +I  LCK  ++ +A  ++ RM+  GI PNVV +N +I+  
Sbjct: 238 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    ++ AL L  +   M+    LP+ +T+N +I+G CK GR   A  +   M     +
Sbjct: 298 CMTNGVDSALLLMEE---MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 354

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY+ LI G+ +    + A  L D+M+K+ ++P+ V +++ +      G V+ A  +
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M+     PD +TY+ L  G C+ G + +A ++  ++ +     +  +Y  LI+  C+
Sbjct: 415 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 474

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLV 500
           +     A +LL  M+  G+ P++ITY +LI G+C  G++E A ++ E +++ E  K ++ 
Sbjct: 475 AGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMF 534

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  +++GLC+   + AA  LL+A ++ G       Y  LI G     ++ +A  +  EM
Sbjct: 535 AYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 594

Query: 560 R-NVGIAVNKVGYNILINFLCKFGCYQQAREL 590
             +     N   Y  +I  L + G +++A  L
Sbjct: 595 TLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 204/421 (48%), Gaps = 6/421 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F AL+    +    + A  V++ ++ +  + ++  +++ +  L K  ++    
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +++K M+  G   NV T+N +I+  C    ++ AL L   M  +G  P+++ +N +I+  
Sbjct: 273 EVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 332

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G    A +LF   G M      P+ +T++C+I GFCKL R++ A  +   M+K  + 
Sbjct: 333 CKTGRAPEANRLF---GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 389

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T++TL++GY   G  ++A RL +EMV     P+   Y S +      G +  A  V
Sbjct: 390 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 449

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M  +   P+  TY+ L    CR G    A+KL  +++   +  +  +Y  LI   C 
Sbjct: 450 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCG 509

Query: 442 SNNLAAAKQLLSSMIV-RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           + +L  A+++L  +        D+  Y  ++DG C+ G +  A+++ E +K+    P   
Sbjct: 510 TGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHD 569

Query: 501 IYNSIINGLCKDASLDAAKSLLQAS--QRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           IY ++I GLC+   L  A  +L+     R    +A  Y  +I      G+  EA A+  E
Sbjct: 570 IYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADE 629

Query: 559 M 559
           +
Sbjct: 630 L 630



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 88/157 (56%), Gaps = 1/157 (0%)

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
           +E + N++ +  +I+GLCK   L  A +     ++ G + +  TYN LING+    K+  
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A+ +  EM+  G+A N V Y+ +I+  C+      A +L + M+ +G +P+ VTY TL++
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              +N   +E  EL D+M   G+ PD  +Y+ +++ L
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGL 157


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 161/505 (31%), Positives = 271/505 (53%), Gaps = 11/505 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQ-KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           V  +L RA    G T  A ++ + ++   G + +I  +N  ++ L K NE+G   +L++E
Sbjct: 51  VLQSLCRA----GETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEE 106

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +V  G+  +V T+N +I +LCK   LEEA  L+  M   G  PNVV ++++IN  C+VG 
Sbjct: 107 LVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGR 166

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--IDCNV 324
           ++ A +L ++M   S D VLPN +T+N  ++G CK      A E+  ++      +  + 
Sbjct: 167 IDEARELIQEMTRKSCD-VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 225

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T++TLIDG  + G ++EA    D+M+  G +PN V YN+ ++ L     +E A  ++  
Sbjct: 226 VTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIES 283

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+DK + PD  TYS+L    C+   V +A +L + +       +  ++N +I+ LCKS+ 
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
              A Q+   +  R L+PD +T+  LI G CK GN E A  ++E M     +P+++ + +
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+GLCK   ++AA+ +L     +G+  + +TYN L++G   +G+I E      EM + G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
                + Y  L+  LC+      A +L+  +   G  PD VTY  LV    K+   E+ I
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            + ++MV  G  PD+ T+ A    L
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGL 548



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 145/451 (32%), Positives = 244/451 (54%), Gaps = 11/451 (2%)

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYY-RMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
            +V  +N+V+ +LC+  +   AL ++   M + G+ P +V +N IIN  C+  +L   ++
Sbjct: 43  RSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGME 102

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           LF ++ V  G    P+ VT+N +I+  CK G +E A  +   M   G   NV TY+ LI+
Sbjct: 103 LFEEL-VKRGHH--PDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLIN 159

Query: 333 GYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-- 388
           G  + G  +EA  L  EM ++   ++PN + YNS +  L  +     A  ++  + D   
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD  T+S L  GLC+ G   +A   ++ ++    V +  +YN L+N LCK++ +  A
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERA 277

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             ++ SM+ +G+ PD+ITY  L+D +CK   ++ A+++   M      PN+V +NSII+G
Sbjct: 278 HAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 337

Query: 509 LCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK D S +A +  LQ   R+ + D +T+N LI G    G   +A A+F EM    +  +
Sbjct: 338 LCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPD 397

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + +  LI+ LCK G  + AR+++ +M   G+ P+ VTY  LV    K+   EE  E  +
Sbjct: 398 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLE 457

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +MV SG  P++ TY +++  L      +D +
Sbjct: 458 EMVSSGCVPESMTYGSLVYALCRASRTDDAL 488



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 247/482 (51%), Gaps = 6/482 (1%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           ++ ++L  +GH   +  +N  +  L K  ++    +L+  M S G V NV T++++I  L
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161

Query: 227 CKECKLEEALSLYYRMLKSG--IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           CK  +++EA  L   M +    + PN++ +N  ++  C+      A +L R +   S   
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS-LR 220

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V P++VT + +I+G CK G+ +  E     MI  G   NV TY  L++G  +    E A 
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            + + MV +G+ P+ + Y+  +        V+ AL +L  M  +   P+  T++ +  GL
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C++    +AF++  QV    +V D  ++NILI   CK+ N   A  L   M+ + + PD+
Sbjct: 339 CKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDV 398

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +T+G LIDG CK G +E A  + + M  +   PN+V YN +++GLCK   ++     L+ 
Sbjct: 399 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G + +++TY +L+       +  +A  + S++++ G   + V YNIL++ L K G 
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            +QA  +++ M+  G  PD  T+        ++ +    +EL   ++  G+ PD  T ++
Sbjct: 519 TEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 578

Query: 644 II 645
           I+
Sbjct: 579 IL 580



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 191/415 (46%), Gaps = 18/415 (4%)

Query: 97  SCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRAC 156
           SC ++  ++ +  F D L      M+A +    E +  L D           F  L+   
Sbjct: 181 SCDVLPNIITYNSFLDGLCKQS--MTAEAC---ELMRSLRDGSLRVSPDTVTFSTLIDGL 235

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            + G T+ A +    +   G+  ++  +N  ++ L K +++ R   + + MV  G   +V
Sbjct: 236 CKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 293

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD----LEFALK 272
            T+++++ A CK  +++EAL L + M   G  PNVV FN II+  C+        + AL+
Sbjct: 294 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQ 353

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           ++ +M       ++P+ VT N +I G CK G  E A  +   M+   +  +V T+  LID
Sbjct: 354 VYNRM-------LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALID 406

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  + G  E A  + D M   G+ PN V YN  +H L   G +E     L +M+     P
Sbjct: 407 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVP 466

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  TY  L   LCR      A +L +++       D  +YNIL++ L KS     A  +L
Sbjct: 467 ESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 526

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
             M+ +G  PD  T+     G  + GN+ G +++   +      P+    +SI++
Sbjct: 527 EEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 180/654 (27%), Positives = 318/654 (48%), Gaps = 54/654 (8%)

Query: 58  LTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLM 117
           L  S+   ++++   + +L  +FY W      F H++ S    ++LLV       A+ L 
Sbjct: 75  LHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLF 134

Query: 118 ---------------GNLMSAN--SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
                            L+ A   +   +E   G          + A ++ ++++  + G
Sbjct: 135 RSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAG 194

Query: 161 ATEGAYDVIQ-KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
            T  A ++ + ++   G + +I  +N  ++ L K NE+G   +L++E+V  G+  +V T+
Sbjct: 195 ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTY 254

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I +LCK   LEEA  L+  M      PNVV ++++IN  C+VG ++ A +L ++M  
Sbjct: 255 NTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR 314

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--IDCNVRTYATLIDGYARG 337
            S D VLPN +T+N  ++G CK      A E+  ++      +  +  T++TLIDG  + 
Sbjct: 315 KSCD-VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC 373

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +EA  + D+M+  G +PN + YN+ ++ L     +E A  ++  M+DK + PD  TY
Sbjct: 374 GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 433

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           S+L    C+   V +A +L + +       +  ++N +I+ LCKS+    A Q+   M +
Sbjct: 434 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMAL 493

Query: 458 R-GLIPDIITYGTLID-------------------------------GYCKGGNIEGAVQ 485
           + GL+PD ITY TLID                               G  K G++  A+Q
Sbjct: 494 KHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQ 553

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYF 544
           VY  M ++E  P+ V +N +I G CK  + + A +L +      L  D +T+  LI+G  
Sbjct: 554 VYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 613

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G++  A  +   M N+G+  N V YN L++ LCK G  ++A + ++ M+  G +PD +
Sbjct: 614 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 673

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           TY +LV    +    ++ ++L  ++   G  PD  TYN ++  L      E  +
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 188/663 (28%), Positives = 298/663 (44%), Gaps = 120/663 (18%)

Query: 97  SCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRAC 156
           SC ++  ++ +  F D L      M+A +    E +  L D           F  L+   
Sbjct: 316 SCDVLPNIITYNSFLDGLCKQS--MTAEAC---ELMRSLRDGSLRVSPDTVTFSTLIDGL 370

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            + G  + A  V   +   G+  ++  +N  ++ L K +++ R   + + MV  G   +V
Sbjct: 371 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 430

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T+++++ A CK  +++EAL L + M   G  PNVV FN II+  C+      A ++F  
Sbjct: 431 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDD 490

Query: 277 MGVMSGDSVLPNSVTH-------------------------------NCIINGFCKLGRV 305
           M +  G  ++P+ +T+                               NC ING  KLG V
Sbjct: 491 MALKHG--LVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDV 548

Query: 306 EFAEEIRYAMI-------------------KAG----------------IDCNVRTYATL 330
             A ++   M+                   KAG                +  +V T+  L
Sbjct: 549 SRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGAL 608

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDG  + G  E A  + D M   G+ PN V YN+ +H L   G +E A   L +M+    
Sbjct: 609 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGC 668

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQ------------------------------- 419
            PD  TY  L   LCR      A +L ++                               
Sbjct: 669 VPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAIT 728

Query: 420 VLEEHMVG-----DAYSYNILINYLCKSNNLAAAKQL---LSSMIVRGLIPDIITYGTLI 471
           VLEE MVG     D  +YN LI+ LCK+ +L  A++L   +SS + R  +P+++TY  LI
Sbjct: 729 VLEE-MVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 472 DGYCKGGNIEGAVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQAS 525
           +G CK G I+ A ++ + M  K  +  PN++ YNS ++GLCK + +  A    +SL   S
Sbjct: 788 NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            R+   D +T++TLI+G    G+  EA  +F +M   G   N V YN+L+N LCK    +
Sbjct: 848 LRVS-PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  +++ M+  G+ PD +TY+ LV  F K    +E +EL   M   G +P+  T+N+II
Sbjct: 907 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSII 966

Query: 646 SPL 648
             L
Sbjct: 967 DGL 969



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 263/510 (51%), Gaps = 19/510 (3%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             F AL+    + G  E A D++  +   G   ++  +N  +  L K   I    +  +EM
Sbjct: 604  TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM 663

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            VS G V +  T+  ++YALC+  + ++AL L   +   G  P+ V +N++++   + G  
Sbjct: 664  VSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQT 723

Query: 268  EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC---NV 324
            E A+ +  +M    G    P+ VT+N +I+  CK G +E A  +   M      C   NV
Sbjct: 724  EQAITVLEEM---VGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNV 780

Query: 325  RTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVL 382
             TY+ LI+G  + G  +EA  L  EM+++   ++PN + YNS +  L  +  +  A  ++
Sbjct: 781  VTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM 840

Query: 383  SDMIDK--HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
              + D    + PD  T+S L  GLC+ G   +A  + + ++    V +  +YN+L+N LC
Sbjct: 841  RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLC 900

Query: 441  KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
            K++ +  A  ++ SM+ +G+ PD+ITY  L+D +CK  +++ A+++   M      PN+V
Sbjct: 901  KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVV 960

Query: 501  IYNSIINGLCK-DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
             +NSII+GLCK D S +A +     + + GL  D ITY TLI+G F  G   +A  +   
Sbjct: 961  TFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDA 1020

Query: 559  MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
            M +     +   +N  IN L K G    +R L +++ L  ++PD VT+  L+    K  +
Sbjct: 1021 MPD----PDTYAFNCCINGLSKLG--DVSRALHRMLELE-LVPDKVTFNILIAGACKAGN 1073

Query: 619  PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             E+   L ++MV   + PD  T+ A+I  L
Sbjct: 1074 FEQASALFEEMVAKNLQPDVMTFGALIDGL 1103



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 249/501 (49%), Gaps = 28/501 (5%)

Query: 112  DALLLMGNL-MSANSVSPLEFLEGLLDSYEI--------------CKATPAVFDALVRAC 156
            D L LMGNL +  N V+    + GL  S  I              C      + +LV A 
Sbjct: 623  DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYAL 682

Query: 157  TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
             +   T+ A  ++ +LK  G       +N  +  L K  +  +   + +EMV  G+  +V
Sbjct: 683  CRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDV 742

Query: 217  NTFNLVIYALCKECKLEEALSLYYRM---LKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
             T+N +I +LCK   LEEA  L+  M   +     PNVV ++++IN  C+VG ++ A +L
Sbjct: 743  VTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAREL 802

Query: 274  FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--IDCNVRTYATLI 331
             ++M   S D VLPN +T+N  ++G CK   +  A E+  ++      +  +  T++TLI
Sbjct: 803  IQEMMRKSCD-VLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLI 861

Query: 332  DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            DG  + G ++EA  + D+M+  G +PN V YN  ++ L     +E A  ++  M+DK + 
Sbjct: 862  DGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT 921

Query: 392  PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
            PD  TYS+L    C+   V +A +L + +       +  ++N +I+ LCKS+    A Q+
Sbjct: 922  PDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQM 981

Query: 452  LSSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
               M ++ GL PD ITY TLIDG  + G    A  + + M      P+   +N  INGL 
Sbjct: 982  FDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLS 1037

Query: 511  KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
            K    D +++L +  +   + D +T+N LI G    G   +A A+F EM    +  + + 
Sbjct: 1038 KLG--DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 1095

Query: 571  YNILINFLCKFGCYQQARELM 591
            +  LI+ LCK G  +   ++M
Sbjct: 1096 FGALIDGLCKAGQVEATWDIM 1116



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 223/479 (46%), Gaps = 69/479 (14%)

Query: 99   AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT------------- 145
            A+VH L    R ++A   +  ++S+  V P     G L  Y +C+A+             
Sbjct: 642  ALVHGLCKSGRIEEACQFLEEMVSSGCV-PDSITYGSL-VYALCRASRTDDALQLVSELK 699

Query: 146  -------PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
                      ++ LV    + G TE A  V++++  KGH   +  +N  +  L K  ++ 
Sbjct: 700  SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE 759

Query: 199  RFWKLYKEM---VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--IWPNVVC 253
               +L+ +M   VS   V NV T++++I  LCK  +++EA  L   M++    + PN++ 
Sbjct: 760  EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819

Query: 254  FNMIINEACQVGDLEFALKLFRKMG----VMSGDSV------------------------ 285
            +N  ++  C+   +  A +L R +      +S D+V                        
Sbjct: 820  YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879

Query: 286  ------LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                  +PN VT+N ++NG CK  ++E A  +  +M+  G+  +V TY+ L+D + +   
Sbjct: 880  MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939

Query: 340  SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTYS 398
             +EAL L   M  RG  PN V +NS I  L        A  +  DM  KH + PD  TY 
Sbjct: 940  VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYC 999

Query: 399  ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
             L  GL R G   QA  L + + +     D Y++N  IN L K  +++ A   L  M+  
Sbjct: 1000 TLIDGLFRTGWAGQAEVLLDAMPDP----DTYAFNCCINGLSKLGDVSRA---LHRMLEL 1052

Query: 459  GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
             L+PD +T+  LI G CK GN E A  ++E M     +P+++ + ++I+GLCK   ++A
Sbjct: 1053 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 1111



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 149/323 (46%), Gaps = 14/323 (4%)

Query: 94   LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV 153
            +  SC ++  ++ +  F D L     +  A      E +  L D           F  L+
Sbjct: 807  MRKSCDVLPNIITYNSFLDGLCKQSMMAEA-----CELMRSLRDGSLRVSPDTVTFSTLI 861

Query: 154  RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                + G T+ A +V   +   G+  ++  +N  ++ L K +++ R   + + MV  G  
Sbjct: 862  DGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVT 921

Query: 214  ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
             +V T+++++ A CK   ++EAL L + M   G  PNVV FN II+  C+      A ++
Sbjct: 922  PDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQM 981

Query: 274  FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            F  M +  G  + P+ +T+  +I+G  + G    AE +  AM     D +   +   I+G
Sbjct: 982  FDDMTLKHG--LAPDKITYCTLIDGLFRTGWAGQAEVLLDAM----PDPDTYAFNCCING 1035

Query: 334  YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             ++ G    AL     M++  L+P+ V +N  I      G+ E A  +  +M+ K++ PD
Sbjct: 1036 LSKLGDVSRALH---RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 1092

Query: 394  HFTYSILTKGLCRNGCVKQAFKL 416
              T+  L  GLC+ G V+  + +
Sbjct: 1093 VMTFGALIDGLCKAGQVEATWDI 1115


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 186/640 (29%), Positives = 306/640 (47%), Gaps = 52/640 (8%)

Query: 53  QMAPSLTNSLVNRVVSEFRKS--PKLALEFYTWVGENNRFSHSLESSCAIVHL---LVNW 107
           +++P+  +SLV R  S       PKL L+F+ W   + + + S  +  A  HL   L   
Sbjct: 78  RLSPAAISSLVRRRPSPSSPRLHPKLLLDFFYW--SSPQLAPSAPAPDAFAHLAMSLCAG 135

Query: 108 RRFDDALLLMGNLMSANSVSPL---EFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
             F+ A  L+  ++ A    P+        L DS      +PAV D LV    + G  + 
Sbjct: 136 SLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGH---RSPAVLDVLVDTYKKSGRVQD 192

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A +V+  ++ +G + SI   N  L  L++ + +   WK+ + MV  G   +V T++ +I 
Sbjct: 193 AAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIE 252

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A CK  + + A  +   M + G   N V +N++I   C+ G +E A   F+K   M    
Sbjct: 253 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKK--DMEDYG 309

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++P+  T+  +ING CK  R   A+ +   M  A +  NV  YA LIDG+ R G+++EA 
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++  EMV  G+ PN + Y++ +  L   G ++ A  +L  M+     PD  TY+++ +G 
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            R+   K AF+L +++    +  + Y+Y+I+I+ LC+S     A  LL  M  +GL P+ 
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
             Y  LI GYC+ GN+  A ++++ M KV   P+L  YNS+I GL K   ++ +      
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV-------------- 569
            Q  GLL +  TY+ LI+GY  NG +  A  +   M + G+  N V              
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609

Query: 570 ---------------------GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
                                 Y ILI+ L   G  + A  ++  +  +G +PD   Y++
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L++   K    E+   + D+M   GV P+   YNA+I  L
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 281/571 (49%), Gaps = 48/571 (8%)

Query: 116 LMGNLMSANSVSPL----EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           L+ +L+ A++++ L    EF+ G   S ++       +  L+ A  ++   + A  V+ +
Sbjct: 215 LLKDLLRADAMALLWKVREFMVGAGISPDV-----YTYSTLIEAYCKVREFDTAKKVLVE 269

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           ++ +G  ++   +N  ++ L +   +   +   K+M   G V +  T+  +I  LCK  +
Sbjct: 270 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 329

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             EA +L   M  + + PNVV +  +I+   + G+ + A K+ ++M V +G  V PN +T
Sbjct: 330 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM-VAAG--VQPNKIT 386

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ ++ G CK+G+++ A  +   M++     +  TY  +I+G+ R  S ++A RL  EM 
Sbjct: 387 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEME 446

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G+ PN   Y+  IH L   G+ E A  +L +M  K + P+ F Y+ L  G CR G V 
Sbjct: 447 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS 506

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A ++ +++ + +++ D Y YN LI  L K   +  + +  + M  RGL+P+  TY  LI
Sbjct: 507 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 566

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIY----------------------------- 502
            GY K G++E A Q+ + M     KPN VIY                             
Sbjct: 567 HGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM 626

Query: 503 ------NSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAM 555
                   +I+ L    +++AA  +L   ++ G + D   Y++LI+G        +AF +
Sbjct: 627 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 686

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             EM   G+  N V YN LI+ LCK G    AR +   ++  G++P+ VTYT+L+    K
Sbjct: 687 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 746

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
                    L+++M+ +G++PD   Y+ + +
Sbjct: 747 VGDISNAFYLYNEMLATGITPDAFVYSVLTT 777



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 259/527 (49%), Gaps = 40/527 (7%)

Query: 133 EGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           + LLD     +  P   V+  L+    + G  + A+ +I+++   G   +   ++N +  
Sbjct: 334 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 393

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K+ ++ R   L K+MV   +  +  T+NL+I    +    ++A  L   M  +GI PN
Sbjct: 394 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 453

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  ++++I+  CQ G+ E A  L  +M   +   + PN+  +  +I+G+C+ G V  A E
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEEM---TTKGLKPNAFVYAPLISGYCREGNVSLACE 510

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           I   M K  +  ++  Y +LI G ++ G  EE+ +   +M +RGL+PN   Y+  IH   
Sbjct: 511 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             GD+E A  ++  M+D  + P+   Y  L +   ++  +++       +L++ ++ D  
Sbjct: 571 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 630

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            Y ILI+ L  S N+ AA ++LS +   G +PD+  Y +LI G CK  + E A  + + M
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
            K    PN+V YN++I+GLCK   +  A+++  +    GL+ + +TY +LI+G    G I
Sbjct: 691 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 750

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNIL----------------------------------I 575
           + AF +++EM   GI  +   Y++L                                  +
Sbjct: 751 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV 810

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           +  CK G  Q+  +L+ V++  G++P+ +T   +++  S+     EV
Sbjct: 811 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEV 857



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 225/451 (49%), Gaps = 4/451 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           + N +   ++       +K+ KEMV+ G   N  T++ ++  LCK  +++ A  L  +M+
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           +    P+ + +N+II    +    + A   FR +  M    + PN  T++ +I+G C+ G
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSKKDA---FRLLSEMENAGISPNVYTYSIMIHGLCQSG 468

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             E A ++   M   G+  N   YA LI GY R G+   A  + D+M K  ++P+   YN
Sbjct: 469 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 528

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L   G VE +    + M ++ + P+ FTYS L  G  +NG ++ A +L  ++L+ 
Sbjct: 529 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT 588

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +   Y  L+    KS+++        SM+ +G++ D   YG LI      GN+E A
Sbjct: 589 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 648

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
            +V   ++K    P++ +Y+S+I+GLCK A  + A  +L    + G+  + + YN LI+G
Sbjct: 649 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 708

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +G I+ A  +F+ +   G+  N V Y  LI+  CK G    A  L   M+  GI PD
Sbjct: 709 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
              Y+ L T  S     E+ + L ++M L G
Sbjct: 769 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 148/606 (24%), Positives = 260/606 (42%), Gaps = 126/606 (20%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +D LVR   ++G  + A  +++++    H      +N  +    + +     ++L  EM
Sbjct: 386 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 445

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G   NV T++++I+ LC+  + E+A  L   M   G+ PN   +  +I+  C+ G++
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A ++F KM  ++   VLP+   +N +I G  K+GRVE + +    M + G+  N  TY
Sbjct: 506 SLACEIFDKMTKVN---VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 562

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY----------------NST------ 365
           + LI GY + G  E A +L   M+  GL PN+V+Y                +ST      
Sbjct: 563 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 622

Query: 366 -------------IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
                        IH L + G++E A  VLS +      PD   YS L  GLC+    ++
Sbjct: 623 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK 682

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF + +++ ++ +  +   YN LI+ LCKS +++ A+ + +S++ +GL+P+ +TY +LID
Sbjct: 683 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLID 742

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIY------------------------------ 502
           G CK G+I  A  +Y  M      P+  +Y                              
Sbjct: 743 GSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHAS 802

Query: 503 ----NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
               N++++G CK   +     LL      GL+ +A+T   +I+G    GK++E   +F 
Sbjct: 803 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 862

Query: 558 EM-------------------------------------------------RNVGIAVNK 568
           E+                                                 R+V +A + 
Sbjct: 863 ELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSA 922

Query: 569 ----VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
                 Y  +++ LC+ G   +A  L+K M   GI P       L+T    +   +E   
Sbjct: 923 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNT 982

Query: 625 LHDDMV 630
           + D+M+
Sbjct: 983 VLDNML 988



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 216/507 (42%), Gaps = 54/507 (10%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    V+  L+    + G    A ++  K+        ++ +N+ +  L K+  +    K
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            + +M   G + N  T++ +I+   K   LE A  L  RML +G+ PN V +  ++    
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605

Query: 263 QVGDLEFALKLFRKM---GVMSGDSV-----------------------------LPNSV 290
           +  D+E     F+ M   GVM  + +                             +P+  
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            ++ +I+G CK    E A  I   M K G+D N+  Y  LIDG  + G    A  + + +
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           + +GL+PN V Y S I      GD+  A ++ ++M+   I PD F YS+LT G    G +
Sbjct: 726 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 785

Query: 411 KQA-FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +QA F +    L  H      S+N L++  CK   +    +LL  ++ RGL+P+ +T   
Sbjct: 786 EQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843

Query: 470 LIDGYCKGGNIEGAVQVYENMKKV------------------EKKPNLVIYNSIINGLCK 511
           +I G  + G +     ++  +++                   + K  L + + +I   CK
Sbjct: 844 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 903

Query: 512 DASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           + +LD A  L      +   +   +Y  +++     GK++EA  +  EM   GI  ++  
Sbjct: 904 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQ 963

Query: 571 YNILINFLCKFGCYQQARELMKVMILH 597
             IL+  L   G  Q+   ++  M+ H
Sbjct: 964 CLILLTNLHTSGYIQEHNTVLDNMLCH 990



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 1/188 (0%)

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+D Y K G ++ A +V   M+     P++   N+++  L +  ++     + +     G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D  TY+TLI  Y    +   A  +  EMR  G  +N V YN+LI  LC+ G  ++A 
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              K M  +G++PD  TY  L+    K+    E   L D+M  + + P+   Y  +I   
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359

Query: 649 LGEKSAED 656
           + E +A++
Sbjct: 360 MREGNADE 367


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 196/669 (29%), Positives = 315/669 (47%), Gaps = 41/669 (6%)

Query: 17  SRAFHVGKQFANPSTEDIVFRAI---CVNLRQRKWKILEQMAPSLTN-SLVNRVVSEFRK 72
           S + H    F+    +D++ ++I     N     W +  Q  P + +  L  RV+S FR 
Sbjct: 35  STSNHSAPPFSETHFQDVISKSIREKPSNFSNYYW-LSHQFGPVIVDPDLFVRVLSSFRT 93

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN-------- 124
           SP++AL  + W      F  S    CAI+ +L        A  +M  +++AN        
Sbjct: 94  SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153

Query: 125 ---------SVSPLEFLEGLLDSYEICKATPAVFDALVRA--------CTQI-------G 160
                    SV  L+ L  +     + +   +VFD ++++        C +I        
Sbjct: 154 IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKD 213

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
               A +V + +   G   +I  +N  L    K  ++ +   L  EM   G   N  T+N
Sbjct: 214 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           ++I  L K+ + E+A  L   MLK+G+  +   +N +I      G L  AL L  +M V+
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM-VL 332

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
            G S  P   T+N  I G CKLGR+  A +    M+   +  +V +Y TLI GY R G+ 
Sbjct: 333 KGAS--PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
            +A  L DE+    L P  V YN+ +  L  +G++E A  +  +MI++ I PD  TY+IL
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G C+ G +  A +  +++L E +  D+Y+Y   I    K  + + A  L   M+ +G 
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD+I Y  ++DG CK GN+E A ++ + M      P+ V Y SII+   ++  L   + 
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           +       GL  ++ TY  LI+G+   G++  AF  FSEM+  GI  N + YN LIN LC
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K     QA      M+  GI P+  +YT L+       + +E + L+  M+  GV PD+ 
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSC 690

Query: 640 TYNAIISPL 648
           T++A++  L
Sbjct: 691 THSALLKQL 699



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 237/485 (48%), Gaps = 37/485 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+   ++ G  E A  +I ++   G  VS + +N  +        +    
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L +EMV  G    V T+N  IY LCK  ++ +A+     ML + + P+VV +N +I   
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++G+L  A  LF ++  +    + P  VT+N +++G C+ G +E A++++  MI  GI 
Sbjct: 385 CRLGNLMKAFLLFDELRSIY---LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY  L++G  + GS   A    DEM+  GL  ++  Y + I      GD   A  +
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ K   PD   Y+++  GLC+ G +++A +L  +++ + ++ D  +Y  +I+   +
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  L   +++   M+ +GL P ++TY  LI G+   G +E A   +  M++    PN++ 
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YNS+INGLCK   +D                                  +A+  F+EM  
Sbjct: 622 YNSLINGLCKVRRMD----------------------------------QAYNFFAEMVE 647

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            GI  NK  Y ILIN  C  G +Q+A  L K M+  G+ PD  T++ L+ +  K+C  + 
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQA 707

Query: 622 VIELH 626
           V +L 
Sbjct: 708 VRQLE 712



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 231/442 (52%), Gaps = 4/442 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V   +L+I+   K+  +E+ LS++ +M+KS + P+V   N I+        +  A++++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R MG      + P  VT+N +++ +CK G+V+   ++   M + G   N  TY  LI+G 
Sbjct: 223 RTMGEFG---IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           ++ G  E+A  L  EM+K GL  +   YN  I+  F +G +  AL +  +M+ K   P  
Sbjct: 280 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+    GLC+ G +  A +  + +L  +++ D  SYN LI   C+  NL  A  L   
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           +    L P I+TY TL+DG C+ G +E A Q+   M      P++V Y  ++NG CK  S
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L  A+         GL LD+  Y T I G    G  + AF++  EM   G   + + YN+
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +++ LCK G  ++A EL++ M+  G+IPDYVTYT+++    +N    +  E+  +M+  G
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579

Query: 634 VSPDNQTYNAIISPLLGEKSAE 655
           ++P   TY  +I    G+   E
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLE 601


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/536 (30%), Positives = 274/536 (51%), Gaps = 16/536 (2%)

Query: 51  LEQMAPSLTNSLVNRVVS--EFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           L+++ PSLT   V+++++       P   L F+  +     F H+L S C ++H L   R
Sbjct: 74  LKRILPSLTPRHVSKLITLNPLCLPPSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHR 133

Query: 109 RFDDALLLMGNLMS---ANSVSPL--EFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
               A  L+  L+S    NS S L    L  +   +    +   VFDAL+ A    G T 
Sbjct: 134 MLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTP 193

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN--EIGRFWKLYKEMVSCGYVENVNTFNL 221
            A    + +      V I    N L  +V+L   EI R W LY E++  GY   +  FN+
Sbjct: 194 DAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNV 253

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +++  CK   +  A  ++  + K G+ P VV FN +I+  C+ GD+E     FR  GVM 
Sbjct: 254 LMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEG---FRLKGVME 310

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
            + V P+  T + +ING CK GR++    +   M   G+  N  T+ TLIDG  +GG  +
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            AL+    M+ +G+ P+ V YN+ I+ L   GD++ A  ++++M    + PD  T++ L 
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G C++G ++ A ++  +++EE +  D  ++  LI+ LC+   +  A ++L+ M+  G  
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD  TY  +ID +CK G+++   ++ + M+     P +V YN+++NGLCK   +  AK L
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKML 550

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           L A   +G+  + ITYN L++G+  +G   +     SE    G+  +   Y  L+N
Sbjct: 551 LDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEK---GLVTDYASYTALVN 603



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 176/342 (51%), Gaps = 1/342 (0%)

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +E +  +   ++ +G    +  +  L+ G+ + G    A  + DE+ KRGL P  V +N+
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I      GDVE    +   M  + +CPD FT+S L  GLC+ G + +   L +++    
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +V +  ++  LI+  CK   +  A +    M+ +G+ PD++TY  LI+G CK G+++ A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           ++   M     KP+ + + ++I+G CKD  +++A  + +     G+ LD + +  LI+G 
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G++ +A  M ++M + G   +   Y ++I+  CK G  +   +L+K M   G +P  
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGV 528

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           VTY  L+    K    +    L D M+  GV+P++ TYN ++
Sbjct: 529 VTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 157/301 (52%), Gaps = 1/301 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E++  G  P    +N  +H     GDV  A  V  ++  + + P   +++ L  G C++G
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V++ F+L   +  E +  D ++++ LIN LCK   L     L   M  RGL+P+ +T+ 
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG CKGG ++ A++ ++ M     +P+LV YN++INGLCK   L  A+ L+      
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D IT+ TLI+G   +G +  A  +   M   GI ++ V +  LI+ LC+ G    A
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             ++  M+  G  PD  TYT ++  F K    +   +L  +M   G  P   TYNA+++ 
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNG 537

Query: 648 L 648
           L
Sbjct: 538 L 538



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 135/248 (54%), Gaps = 1/248 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +++++ L+ +VL+       Y +N+L++  CK+ ++  A+ +   +  RGL P ++++ T
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G CK G++E   ++   M+     P++  ++++INGLCK+  LD    L       G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L+ + +T+ TLI+G    GK+  A   F  M   G+  + V YN LIN LCK G  ++AR
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L+  M   G+ PD +T+TTL+    K+   E  +E+   MV  G+  D+  + A+IS L
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 649 LGEKSAED 656
             E    D
Sbjct: 469 CREGRVHD 476



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 157/325 (48%), Gaps = 9/325 (2%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV-----VYNSTIHWLFAEGDVEGALFV 381
           +  LI  Y   G + +A++ C  +V +   P  +     +    +     E +   AL++
Sbjct: 179 FDALISAYVDSGFTPDAVQ-CFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYL 237

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +++D    P  + +++L  G C+ G V  A  + +++ +  +     S+N LI+  CK
Sbjct: 238 --EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCK 295

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S ++    +L   M   G+ PD+ T+  LI+G CK G ++    +++ M      PN V 
Sbjct: 296 SGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVT 355

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           + ++I+G CK   +D A    Q     G+  D +TYN LING    G + EA  + +EM 
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  +K+ +  LI+  CK G  + A E+ + M+  GI  D V +T L++   +     
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           +   +  DM+ +G  PD+ TY  +I
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVI 500



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 53/104 (50%)

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +I  ++A++ E+ + G       +N+L++  CK G    AR +   +   G+ P  V++ 
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           TL++   K+   EE   L   M   GV PD  T++A+I+ L  E
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKE 331


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 196/669 (29%), Positives = 315/669 (47%), Gaps = 41/669 (6%)

Query: 17  SRAFHVGKQFANPSTEDIVFRAI---CVNLRQRKWKILEQMAPSLTN-SLVNRVVSEFRK 72
           S + H    F+    +D++ ++I     N     W +  Q  P + +  L  RV+S FR 
Sbjct: 35  STSNHSAPPFSETHFQDVISKSIREKPSNFSNYYW-LSHQFGPVIVDPDLFVRVLSSFRT 93

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN-------- 124
           SP++AL  + W      F  S    CAI+ +L        A  +M  +++AN        
Sbjct: 94  SPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVL 153

Query: 125 ---------SVSPLEFLEGLLDSYEICKATPAVFDALVRA--------CTQI-------G 160
                    SV  L+ L  +     + +   +VFD ++++        C +I        
Sbjct: 154 IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKD 213

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
               A +V + +   G   +I  +N  L    K  ++ +   L  EM   G   N  T+N
Sbjct: 214 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 273

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           ++I  L K+ + E+A  L   MLK+G+  +   +N +I      G L  AL L  +M V+
Sbjct: 274 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM-VL 332

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
            G S  P   T+N  I G CKLGR+  A +    M+   +  +V +Y TLI GY R G+ 
Sbjct: 333 KGAS--PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
            +A  L DE+    L P  V YN+ +  L  +G++E A  +  +MI++ I PD  TY+IL
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G C+ G +  A +  +++L E +  D+Y+Y   I    K  + + A  L   M+ +G 
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD+I Y  ++DG CK GN+E A ++ + M      P+ V Y SII+   ++  L   + 
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           +       GL  ++ TY  LI+G+   G++  AF  FSEM+  GI  N + YN LIN LC
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLC 630

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K     QA      M+  GI P+  +YT L+       + +E + L+  M+  GV PD+ 
Sbjct: 631 KVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSC 690

Query: 640 TYNAIISPL 648
           T++A++  L
Sbjct: 691 THSALLKQL 699



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 235/481 (48%), Gaps = 37/481 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+   ++ G  E A  +I ++   G  VS + +N  +        +    
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L +EMV  G    V T+N  IY LCK  ++ +A+     ML + + P+VV +N +I   
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGY 384

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++G+L  A  LF ++  +    + P  VT+N +++G C+ G +E A++++  MI  GI 
Sbjct: 385 CRLGNLMKAFLLFDELRSIY---LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIA 441

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY  L++G  + GS   A    DEM+  GL  ++  Y + I      GD   A  +
Sbjct: 442 PDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSL 501

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ K   PD   Y+++  GLC+ G +++A +L  +++ + ++ D  +Y  +I+   +
Sbjct: 502 QEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLE 561

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  L   +++   M+ +GL P ++TY  LI G+   G +E A   +  M++    PN++ 
Sbjct: 562 NGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVIT 621

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YNS+INGLCK   +D                                  +A+  F+EM  
Sbjct: 622 YNSLINGLCKVRRMD----------------------------------QAYNFFAEMVE 647

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            GI  NK  Y ILIN  C  G +Q+A  L K M+  G+ PD  T++ L+ +  K+C  + 
Sbjct: 648 KGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQA 707

Query: 622 V 622
           V
Sbjct: 708 V 708



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/442 (31%), Positives = 231/442 (52%), Gaps = 4/442 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V   +L+I+   K+  +E+ LS++ +M+KS + P+V   N I+        +  A++++
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVY 222

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R MG      + P  VT+N +++ +CK G+V+   ++   M + G   N  TY  LI+G 
Sbjct: 223 RTMGEFG---IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           ++ G  E+A  L  EM+K GL  +   YN  I+  F +G +  AL +  +M+ K   P  
Sbjct: 280 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+    GLC+ G +  A +  + +L  +++ D  SYN LI   C+  NL  A  L   
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           +    L P I+TY TL+DG C+ G +E A Q+   M      P++V Y  ++NG CK  S
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L  A+         GL LD+  Y T I G    G  + AF++  EM   G   + + YN+
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +++ LCK G  ++A EL++ M+  G+IPDYVTYT+++    +N    +  E+  +M+  G
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579

Query: 634 VSPDNQTYNAIISPLLGEKSAE 655
           ++P   TY  +I    G+   E
Sbjct: 580 LTPSVVTYTVLIHGHAGKGRLE 601


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 269/528 (50%), Gaps = 8/528 (1%)

Query: 123 ANSVSPLEFLEGLLDSYEICKATP----AVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           +N+ + +   + L   Y + +  P      F   + +  +      A  +  ++ + G +
Sbjct: 69  SNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVT 128

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
            ++++ N  ++ L +L+ +     +  +M   G   +  TFN +I  LC E K++EA+ L
Sbjct: 129 HNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGL 188

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           +  M+ SG  PNV+ +N +IN  C+ G+   A+++FRKM    G    PN VT+N II+ 
Sbjct: 189 FNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGK---PNVVTYNTIIDS 245

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK   V  A E    M+  GI  +V TY T++ G+   G   EA RL  EMV R +MP+
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V +N  +  L  EG V  A  V   M +K   P+ +TY+ L  G C +  + +A K+  
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            ++ +    +  SYNILIN  CKS  +  AK+LLS M  + L PD +TY TL+ G C+ G
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYN 537
               A+ +++ M      P+L+ Y+ +++G CK   LD A  LL +  +R    + I Y 
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LI G FI GK+  A  +FS++   GI  +   YN++I  L K G   +A E  + M   
Sbjct: 486 ILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDD 545

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           G +PD  +Y  ++  F +N      I+L D+MV    S D+ T+  ++
Sbjct: 546 GFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 242/480 (50%), Gaps = 4/480 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +  FL  + K  +      L  +M   G   NV + N++I  LC+   ++ A+S+ 
Sbjct: 95  SVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVM 154

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M K GI P+ + FN +IN  C  G ++ A+ LF +M V SG    PN +++N +ING 
Sbjct: 155 GKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM-VWSGHE--PNVISYNTVINGL 211

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G    A  +   M +     NV TY T+ID   +     EA+    EMV RG+ P+ 
Sbjct: 212 CKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDV 271

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V YN+ +H   + G +  A  +  +M+ +++ PD  T++IL  GLC+ G V +A  +   
Sbjct: 272 VTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSET 331

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+    +AY+YN L++  C  N +  A ++L  MI +G  P++ +Y  LI+GYCK   
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           +  A ++   M +    P+ V Y++++ GLC+      A +L +     GLL D + Y+ 
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G+  +G + EA  +  EM    I  N + Y ILI  +   G  + A+EL   +   G
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           I PD  TY  ++    K    +E  E    M   G  PD+ +YN II   L  + +   +
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAI 571



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 163/309 (52%), Gaps = 1/309 (0%)

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           S ++AL     MV+    P+ V +   +  +  +     A+ + + M    +  + ++ +
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           +L   LCR   V  A  +  ++ +  +  DA ++N LIN LC    +  A  L + M+  
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P++I+Y T+I+G CK GN   AV+V+  M++   KPN+V YN+II+ LCKD  ++ A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
              L      G+  D +TYNT+++G+   G++ EA  +F EM    +  + V +NIL++ 
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G   +AR + + M   G  P+  TY  L+  +  +   +E I++   M+  G +P+
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 638 NQTYNAIIS 646
             +YN +I+
Sbjct: 376 LSSYNILIN 384



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 166/340 (48%), Gaps = 32/340 (9%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A + + ++  +G    +  +N  L     L ++    +L+KEMV    + +  TFN+++ 
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF---------- 274
            LCKE  + EA  +   M + G  PN   +N +++  C    ++ A+K+           
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374

Query: 275 ----------------------RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
                                 R +  MS  ++ P++VT++ ++ G C++GR   A  + 
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M  +G+  ++  Y+ L+DG+ + G  +EAL+L  EM +R + PN ++Y   I  +F  
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA 494

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G +E A  + S +    I PD +TY+++ KGL + G   +A++   ++ ++  + D+ SY
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSY 554

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           N++I    ++ + + A QL+  M+ +    D  T+  L+D
Sbjct: 555 NVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 194/677 (28%), Positives = 316/677 (46%), Gaps = 84/677 (12%)

Query: 52  EQMAPSLTNSLVNRVVSEFRKS--PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
           +Q+ P L+    + V    R++  PK AL F+ +  ++  F  +L S C ++  L+    
Sbjct: 135 KQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGF 194

Query: 110 FDDALLLMGNLMSAN--------SVSPLEFLEGLLDSYEICKATPAV--FDALVRA-CTQ 158
              A LL+  L+               +E    + D  E+ ++  AV   D L+   CTQ
Sbjct: 195 VSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQ 254

Query: 159 IG--ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
                   A  V + L  KG   ++      LS LVK NE+ + + +++ M   G   +V
Sbjct: 255 FRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDV 313

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
             F+  I A CK  K+E+A+ L++ M K G+ PNVV +N +I+  C+ G+L+ A +   K
Sbjct: 314 YLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 373

Query: 277 M-----------------GVM------SGDSVL---------PNSVTHNCIINGFCKLGR 304
           M                 G+M        +SVL         PN V +N +I+G+CK+G 
Sbjct: 374 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 433

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A  IR  M+  GI+ N  T  ++I G+ + G  E+A  + +EM+ RG   N   + +
Sbjct: 434 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 493

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            IHWL      E AL  L +M+ +++ P+    + L  GLC+ G    A +L  ++LE+ 
Sbjct: 494 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 553

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              +  + N LI+ LCK+ N+  A +LL  M+ RG + D ITY TLI G CK G +E   
Sbjct: 554 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 613

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-------------- 530
           ++   M K   +P+   YN +I+G+C+   LD A +L    +   L              
Sbjct: 614 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 673

Query: 531 ----------------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
                                 L+++ YNTLI  Y  NG   EAF +  +MR+ GI    
Sbjct: 674 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 733

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             Y+ LI+ +C  G  + A+ L+  M   G++P+ V YT L+  + K    ++V+ +  +
Sbjct: 734 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 793

Query: 629 MVLSGVSPDNQTYNAII 645
           M    + P+  TY  +I
Sbjct: 794 MSSYDIHPNKITYTVMI 810



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 249/488 (51%), Gaps = 4/488 (0%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           AT   +  L+    ++     A  V+++   KG + +   +N  +    K+  +G   ++
Sbjct: 381 ATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 440

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             +MVS G   N  T N +I   CK  ++E+A  +   ML  G   N   F  II+  C 
Sbjct: 441 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 500

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
               E AL+  R+M + +   + PN      ++ G CK G+   A E+ + +++ G   N
Sbjct: 501 NSRFESALRFLREMLLRN---MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGAN 557

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + T   LI G  + G+ +EA+RL  +M++RG + + + YN+ I     EG VE    +  
Sbjct: 558 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 617

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M+ + I PD FTY++L  G+CR G + +A  L N+     +V + Y+Y ++I+  CK++
Sbjct: 618 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 677

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +   ++L + ++ + L  + + Y TLI  YC+ GN   A +++++M+     P    Y+
Sbjct: 678 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 737

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           S+I+G+C    ++ AK L+   ++ GLL + + Y  LI GY   G++ +   +  EM + 
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            I  NK+ Y ++I+   K G  + A +L+  M+  GI+PD VTY  L   F K    EE 
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857

Query: 623 IELHDDMV 630
             L +D V
Sbjct: 858 KLLAEDGV 865



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 2/282 (0%)

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A+ V   + +K + P   T + L   L +   +++++ +  + + + +  D Y ++  IN
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVF-ETMRQGVSPDVYLFSTAIN 321

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             CK   +  A QL   M   G+ P+++TY  LI G CK GN++ A +  E M K     
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
            L+ Y+ +INGL K    + A S+L+ +   G   + + YNTLI+GY   G + +A  + 
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            +M + GI  N V  N +I   CK G  +QA  +++ M+  G   +   +TT++     N
Sbjct: 442 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 501

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              E  +    +M+L  + P++     ++  L  E    D V
Sbjct: 502 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 156/342 (45%), Gaps = 6/342 (1%)

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           A +D  +  Y T      R      A+ +   +  +G+ P        +  L    ++E 
Sbjct: 242 AAVDLLIHVYCTQF----RNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEK 297

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           + +V   M  + + PD + +S      C+ G V+ A +L   + +  +  +  +YN LI+
Sbjct: 298 SYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIH 356

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LCK  NL  A +    M+  G+   +ITY  LI+G  K      A  V +   +    P
Sbjct: 357 GLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTP 416

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           N V+YN++I+G CK  +L  A  +       G+  +++T N++I G+   G++ +A  + 
Sbjct: 417 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 476

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM + G ++N   +  +I++LC    ++ A   ++ M+L  + P+    TTLV    K 
Sbjct: 477 EEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKE 536

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
               + +EL   ++  G   +  T NA+I  L    + ++ V
Sbjct: 537 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 293/591 (49%), Gaps = 7/591 (1%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
           +L    V RV+ E ++ PKLA +F+ W    N F HS+ES C + H+L   R + DA  +
Sbjct: 105 TLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSV 164

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           +  ++   S +  +  + L  +  +C     VFDAL      +G  E A     K+K   
Sbjct: 165 LKEMVL--SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR 222

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
                 + N  L    KL +     + +K+M+  G    V T+N++I  +CKE  +E A 
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            L+  M   G+ P+ V +N +I+   +VG L+  +  F +M  M  +   P+ +T+N +I
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE---PDVITYNALI 339

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           N FCK G++    E    M   G+  NV +Y+TL+D + + G  ++A++   +M + GL+
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           PN   Y S I      G++  A  + ++M+   +  +  TY+ L  GLC    +K+A +L
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++    ++ +  SYN LI+   K+ N+  A +LL+ +  RG+ PD++ YGT I G C 
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
              IE A  V   MK+   K N +IY ++++   K  +      LL   + + + +  +T
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRN-VGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +  LI+G   N  +++A   F+ + N  G+  N   +  +I+ LCK    + A  L + M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +  G++PD   YT+L+    K  +  E + L D M   G+  D   Y +++
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 240/487 (49%), Gaps = 7/487 (1%)

Query: 144 ATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           A P VF  + ++    + G  E A  + +++K +G       +N+ +    K+  +    
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             ++EM       +V T+N +I   CK  KL   L  Y  M  +G+ PNVV ++ +++  
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G ++ A+K +  M  +    ++PN  T+  +I+  CK+G +  A  +   M++ G++
Sbjct: 378 CKEGMMQQAIKFYVDMRRVG---LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY  LIDG       +EA  L  +M   G++PN   YN+ IH      +++ AL +
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L+++  + I PD   Y     GLC    ++ A  + N++ E  +  ++  Y  L++   K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK-KVEKKPNLV 500
           S N      LL  M    +   ++T+  LIDG CK   +  AV  +  +      + N  
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
           I+ ++I+GLCKD  ++AA +L +   + GL+ D   Y +L++G F  G + EA A+  +M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
             +G+ ++ + Y  L+  L      Q+AR  ++ MI  GI PD V   +++ +  +    
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 734

Query: 620 EEVIELH 626
           +E +EL 
Sbjct: 735 DEAVELQ 741



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 204/433 (47%), Gaps = 41/433 (9%)

Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +E   GL +  +     P    +++++    ++G  +      +++K       +  +N 
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            ++   K  ++    + Y+EM   G   NV +++ ++ A CKE  +++A+  Y  M + G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PN   +  +I+  C++G+L  A +L  +M  +    V  N VT+  +I+G C   R++
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG---VEWNVVTYTALIDGLCDAERMK 454

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP--------- 357
            AEE+   M  AG+  N+ +Y  LI G+ +  + + AL L +E+  RG+ P         
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514

Query: 358 --------------------------NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                                     N+++Y + +   F  G+    L +L +M +  I 
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQ 450
               T+ +L  GLC+N  V +A    N++  +  +  +A  +  +I+ LCK N + AA  
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M+ +GL+PD   Y +L+DG  K GN+  A+ + + M ++  K +L+ Y S++ GL 
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 694

Query: 511 KDASLDAAKSLLQ 523
               L  A+S L+
Sbjct: 695 HCNQLQKARSFLE 707



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 1/301 (0%)

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P   V+++    L   G +E A+   S M    + P   + + L     + G      +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
               ++        ++YNI+I+ +CK  ++ AA+ L   M  RGL+PD +TY ++IDG+ 
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K G ++  V  +E MK +  +P+++ YN++IN  CK   L       +  +  GL  + +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +Y+TL++ +   G + +A   + +MR VG+  N+  Y  LI+  CK G    A  L   M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  G+  + VTYT L+         +E  EL   M  +GV P+  +YNA+I   +  K+ 
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488

Query: 655 E 655
           +
Sbjct: 489 D 489



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 2/263 (0%)

Query: 388 KHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +++C P    +  L   L   G +++A +  +++    +     S N L++   K     
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             K+    MI  G  P + TY  +ID  CK G++E A  ++E MK     P+ V YNS+I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G  K   LD      +  + +    D ITYN LIN +   GK+      + EM+  G+ 
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V Y+ L++  CK G  QQA +    M   G++P+  TYT+L+    K  +  +   L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
            ++M+  GV  +  TY A+I  L
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGL 447



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 141/311 (45%), Gaps = 3/311 (0%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+  L  A  +   E L G +D+  +     A ++AL+    +    + A +++ +LK +
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVI-PNLASYNALIHGFVKAKNMDRALELLNELKGR 501

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G    +  +  F+  L  L +I     +  EM  CG   N   +  ++ A  K     E 
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L L   M +  I   VV F ++I+  C+   +  A+  F ++    G  +  N+     +
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG--LQANAAIFTAM 619

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK  +VE A  +   M++ G+  +   Y +L+DG  + G+  EAL L D+M + G+
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             + + Y S +  L     ++ A   L +MI + I PD      + K     GC+ +A +
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739

Query: 416 LHNQVLEEHMV 426
           L + +++  ++
Sbjct: 740 LQSYLMKHQLL 750


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 289/577 (50%), Gaps = 50/577 (8%)

Query: 51  LEQMAPSLT-NSLVNRV-VSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           L+++ PSLT N L++ + ++    SP   L F+ W+   + F  S+ S C + H L   +
Sbjct: 58  LKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHK 117

Query: 109 RFDDALLLMGNLMS---ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGA 165
              +A  L+  ++S    NS S +     +L++    ++   VF  L+ A T  G    A
Sbjct: 118 MLSEAQSLLQFVVSRKGKNSASSV--FTSVLEARGTHQSN-LVFSVLMNAYTDSGYFSDA 174

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
               + ++     +  H+       L+KLN     W  Y+E++ CGY  +V  FN++++ 
Sbjct: 175 IQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHR 234

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LCKE K+ EA  L+  + K G+ P VV FN +IN  C+ G+L+   +L R    M  + V
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR---FMMENRV 291

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            P+  T++ +ING CK G+++ A ++   M   G+  N  T+ TLI+G+   G ++  + 
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGME 351

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           +  +M+++G+ P+ + YN+ I+ L   GD+  A  ++ +M  + + PD FTY++L  G C
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCC 411

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G ++ A ++  ++++E +  D  ++  LI+  C+   +  A++ L  M+  G+ PD  
Sbjct: 412 KEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY  +I G+CK G+++   ++ + M+     P +V YN ++NGLCK   +  A  LL A 
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
             +G++ D ITYN L+ G+                                   CK G  
Sbjct: 532 LNLGVVPDDITYNILLEGH-----------------------------------CKHG-- 554

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
               +  K+    G++ DY +YT+L+    K C   +
Sbjct: 555 -NREDFDKLQSEKGLVQDYGSYTSLIGDLRKTCKERQ 590



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 207/426 (48%), Gaps = 9/426 (2%)

Query: 235 ALSLYYRMLKS-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           A S++  +L++ G   + + F++++N     G    A++ FR   V   +  +P    H+
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRL--VRKHNLQIP---FHS 192

Query: 294 C--IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           C  + +   KL     A      ++  G   +V  +  L+    +     EA  L  E+ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KRGL P  V +N+ I+     G+++    +   M++  + PD FTYS+L  GLC+ G + 
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLD 312

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A KL  ++ +  +V +  ++  LIN  C +       ++   M+ +G+ PD+ITY TLI
Sbjct: 313 DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLI 372

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           +G CK G++  A ++   M +   KP+   Y  +I+G CK+  L++A  + +   + G+ 
Sbjct: 373 NGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIE 432

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           LD + +  LI+G+   G++ EA     EM   GI  +   Y ++I+  CK G  +   +L
Sbjct: 433 LDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKL 492

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +K M   G +P  VTY  L+    K    +    L D M+  GV PD+ TYN ++     
Sbjct: 493 LKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCK 552

Query: 651 EKSAED 656
             + ED
Sbjct: 553 HGNRED 558


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 183/631 (29%), Positives = 312/631 (49%), Gaps = 16/631 (2%)

Query: 28  NPSTEDI-VFRAICVNLRQRKW----KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYT 82
           NPS  D  + R +   L++R      ++L+        S +  V+   +    L L  + 
Sbjct: 42  NPSISDTDLVRRVTTTLKRRHLEPFRRVLKPYESRFKPSHLIWVLINLKNDYPLVLNLFN 101

Query: 83  WVGENNR--FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE----FLEGLL 136
           W    ++  F  +LES C +VHL V       A  L+    +   +   +    F E L+
Sbjct: 102 WAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLI 161

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL-VKLN 195
            +Y+   + P VFD   +   + G    A  +  KL   G  VS+ + N FLS L     
Sbjct: 162 YTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFE 221

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
            I    K+++E    G   N  + N+V++ LC+  K+ EA +L  +M   G +P+VV + 
Sbjct: 222 GIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYG 281

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           ++++  C++G+L+  LKL  ++    G  + P+   +N II   CK G V  AE++   M
Sbjct: 282 VVVSGYCRIGELDKVLKLVDEL---KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGM 338

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
            K G+  +   Y T+I G+ + G+   A +L DEM ++ ++P+ V Y S IH +   G +
Sbjct: 339 RKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKM 398

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  + ++M+ K + PD  TY+ L  G C+ G +K+AF +HNQ++++ +  +  +Y  L
Sbjct: 399 VEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTAL 458

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
            + LCK+  +  A +LL  M  +GL P++ TY T+++G CK GNIE  V++ E M     
Sbjct: 459 ADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGF 518

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFA 554
            P+ + Y ++++  CK   +  A  LL+      L    +T+N L+NG+ ++G + +   
Sbjct: 519 YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGER 578

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +   M   GI  N   +N L+   C     +   E+ K M   G++PD  TY  L+    
Sbjct: 579 LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHC 638

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           K  + +E   LH +MV  G S    TY+A+I
Sbjct: 639 KARNMKEAWFLHKEMVEKGYSVTAATYDALI 669



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 252/479 (52%), Gaps = 6/479 (1%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           Q+G    A++++ ++  +G+   + ++   +S   ++ E+ +  KL  E+   G   +  
Sbjct: 254 QLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEY 313

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +N +I  LCK  ++ EA  L   M K G++P+ V +  +I+  C++G++  A KLF +M
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                  ++P+ VT+  +I+G CK G++  A E+   M+  G++ +  TY  LIDGY + 
Sbjct: 374 ---RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKA 430

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +EA  + ++MV++GL PN V Y +    L   G+++ A  +L +M  K + P+ +TY
Sbjct: 431 GEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTY 490

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + +  GLC+ G ++Q  KL  ++       D  +Y  L++  CK   +A A +LL  M+ 
Sbjct: 491 NTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLN 550

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           + L P ++T+  L++G+C  G +E   ++ E M +    PN   +NS++   C   ++ A
Sbjct: 551 KRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRA 610

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
              + +A    G++ D+ TYN LI G+     + EA+ +  EM   G +V    Y+ LI 
Sbjct: 611 TTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIR 670

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV--LSG 633
              K   + +AR+L + M  HG++ +   Y   V    +  + E  +EL D+ +  LSG
Sbjct: 671 GFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSG 729



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 229/455 (50%), Gaps = 41/455 (9%)

Query: 196 EIGRFWKLYKEMVSCGYVE---NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           ++ + + L+ EM+   Y +   +   F+L    L +   + EA  L++++L+ G+  +V 
Sbjct: 148 DVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVD 207

Query: 253 CFNMIINE-ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             N+ ++  +C    ++ A+K+F +   +    V  N+V+ N +++  C+LG+V  A  +
Sbjct: 208 SCNLFLSRLSCNFEGIKIAVKVFEEFPELG---VCWNTVSCNIVLHCLCQLGKVREAHNL 264

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M   G   +V +Y  ++ GY R G  ++ L+L DE+  +GL P+  +YN+ I  L  
Sbjct: 265 LVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCK 324

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G+V  A  +L  M    + PD+  Y+ +  G C+ G V  A KL +++  + +V D  +
Sbjct: 325 NGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVT 384

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  +I+ +CKS  +  A+++ + M+V+GL PD +TY  LIDGYCK G ++ A  V+  M 
Sbjct: 385 YTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMV 444

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           +    PN+V Y ++ +GLCK                                  NG+I  
Sbjct: 445 QKGLTPNVVTYTALADGLCK----------------------------------NGEIDV 470

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +  EM   G+  N   YN ++N LCK G  +Q  +LM+ M L G  PD +TYTTL+ 
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + K     +  EL   M+   + P   T+N +++
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN 565



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 175/354 (49%), Gaps = 5/354 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L D     K  P +  + +++    + G    A ++  ++ VKG       +   +    
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  E+   + ++ +MV  G   NV T+  +   LCK  +++ A  L + M + G+ PNV 
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N I+N  C++G++E  +KL  +M +       P+++T+  +++ +CK+G +  A E+ 
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAG---FYPDTITYTTLMDAYCKMGEMAKAHELL 545

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M+   +   + T+  L++G+   G  E+  RL + M+++G+MPN   +NS +     +
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            ++     +   M D+ + PD  TY+IL KG C+   +K+A+ LH +++E+     A +Y
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
           + LI    K      A++L   M   GL+ +   Y   +D   + GN E  +++
Sbjct: 666 DALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 144/275 (52%), Gaps = 1/275 (0%)

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A+ V  +  +  +C +  + +I+   LC+ G V++A  L  Q+ +     D  SY +
Sbjct: 223 IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGV 282

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +++  C+   L    +L+  +  +GL PD   Y  +I   CK G +  A Q+   M+K  
Sbjct: 283 VVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG 342

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P+ V+Y ++I+G CK  ++ AA  L    +R  ++ D +TY ++I+G   +GK+ EA 
Sbjct: 343 VFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAR 402

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            MF+EM   G+  ++V Y  LI+  CK G  ++A  +   M+  G+ P+ VTYT L    
Sbjct: 403 EMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGL 462

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            KN   +   EL  +M   G+ P+  TYN I++ L
Sbjct: 463 CKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGL 497


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 169/584 (28%), Positives = 291/584 (49%), Gaps = 11/584 (1%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV----SPLE 130
           +L L+F+ W    +R   +LES C ++HL V  +    A  L+ +      +    S ++
Sbjct: 102 RLVLDFFDWA--RSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQ 159

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F + L+ +Y+   + P VFD   +     G    A  V +K+   G  +S+ + N +L+ 
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219

Query: 191 LVK-LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
           L K   +      +++E    G   NV ++N+VI+ +C+  +++EA  L   M   G  P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +V+ ++ ++N  C+ G+L+   K+++ + VM    + PNS  +  II   C++ ++  AE
Sbjct: 280 DVISYSTVVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E    MI+ GI  +   Y TLIDG+ + G    A +   EM  R + P+ + Y + I   
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              GD+  A  +  +M  K + PD  T++ L  G C+ G +K AF++HN +++     + 
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +Y  LI+ LCK  +L +A +LL  M   GL P+I TY ++++G CK GNIE AV++   
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGK 548
            +      + V Y ++++  CK   +D A+ +L+     GL   I T+N L+NG+ ++G 
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +   + + M   GIA N   +N L+   C     + A  + K M   G+ PD  TY  
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           LV    K  + +E   L  +M   G S    TY+ +I   L  K
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 257/486 (52%), Gaps = 6/486 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A ++ ++    Q+G  + A+ ++  +++KG++  + +++  ++   +  E+ + WKL + 
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   N   +  +I  LC+ CKL EA   +  M++ GI P+ V +  +I+  C+ GD
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A K F +M       + P+ +T+  II+GFC++G +  A ++ + M   G++ +  T
Sbjct: 367 IRAASKFFYEM---HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  LI+GY + G  ++A R+ + M++ G  PN V Y + I  L  EGD++ A  +L +M 
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + P+ FTY+ +  GLC++G +++A KL  +     +  D  +Y  L++  CKS  + 
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A+++L  M+ +GL P I+T+  L++G+C  G +E   ++   M      PN   +NS++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603

Query: 507 NGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
              C   +L AA ++ +   S+ +G  D  TY  L+ G+     + EA+ +F EM+  G 
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           +V+   Y++LI    K   + +ARE+   M   G+  D   +        K   P+ +++
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 722

Query: 625 LHDDMV 630
             D+++
Sbjct: 723 PIDEII 728



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 36/264 (13%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           SYNI+I+++C+   +  A  LL  M ++G  PD+I+Y T+++GYC+ G ++   ++ E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
           K+   KPN  IY SII  LC+   L  A+       R G+L D + Y TLI+G+   G I
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367

Query: 550 -----------------------------------AEAFAMFSEMRNVGIAVNKVGYNIL 574
                                               EA  +F EM   G+  + V +  L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           IN  CK G  + A  +   MI  G  P+ VTYTTL+    K    +   EL  +M   G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487

Query: 635 SPDNQTYNAIISPLLGEKSAEDQV 658
            P+  TYN+I++ L    + E+ V
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAV 511



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/304 (20%), Positives = 120/304 (39%), Gaps = 45/304 (14%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF- 149
           +H +++ C+    +V +    D L   G+L SAN +    +  GL          P +F 
Sbjct: 445 NHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL---------QPNIFT 493

Query: 150 -DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            +++V    + G  E A  ++ + +  G +     +   +    K  E+ +  ++ KEM+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G    + TFN+++   C    LE+   L   ML  GI PN   FN ++ + C   +L+
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613

Query: 269 FALKLFRKM---GV-----------------------------MSGDSVLPNSVTHNCII 296
            A  +++ M   GV                             M G     +  T++ +I
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            GF K  +   A E+   M + G+  +   +    D   +G   +  +   DE+++  L+
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733

Query: 357 PNNV 360
              +
Sbjct: 734 DEQL 737


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 311/651 (47%), Gaps = 100/651 (15%)

Query: 42  NLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHS-LESSCAI 100
           N+R+R    LEQ   +L  ++V+RV+    K P+ A+ F+ W G+   F HS    +C +
Sbjct: 79  NIRER----LEQWRGTLQPAVVSRVLQRL-KDPQTAIVFFVWAGDRG-FKHSTFTRNCFL 132

Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
             LL N               S++ +                   PA+F+ ++ A     
Sbjct: 133 QTLLENG--------------SSDRI-------------------PAMFERMLDA----- 154

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
                          G++   + ++  +  L ++N+I + + +  +    G+   V+ + 
Sbjct: 155 ---------------GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYT 199

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           ++  A CK  +L++AL ++ R + S   P+ + +N II+  C+  D + AL+  ++M   
Sbjct: 200 ILTRAFCKTGRLKDALEIF-RNIPS---PDAIAYNAIIHGHCRKNDCDGALEFLKEM--- 252

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +   V P+  T+N +I+G CK  + + A E+ + M+  G+  +  T+ +++DG  + G  
Sbjct: 253 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 312

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           E A  L   M +R   P+   YN+ I  L  + +V+ A  ++ + +     PD  TYSIL
Sbjct: 313 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSIL 372

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GLC+ G + +AF+L  ++  +    +  +YN LI+ LCK++    A +LL S++  G 
Sbjct: 373 ADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGF 432

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +PD++TY  ++DG CK G ++ A+++ E M K    P+++ Y +++ GLC+   +D A  
Sbjct: 433 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 492

Query: 521 LLQ--------------------------ASQRIGLLDAI-------TYNTLINGYFING 547
           + +                            +   ++D I        YN L++GY   G
Sbjct: 493 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEG 552

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ E   +F +M   G   N   YNI+++ LCK G   +A   ++ M   G +PD V+Y 
Sbjct: 553 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 612

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            ++    K   P+E  ++ D M+ +G+ PD  TYN +++    E+  +D V
Sbjct: 613 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 663



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 257/518 (49%), Gaps = 12/518 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ +   ++ L+    +    + A D++ +    G    +  ++     L K   I   +
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L KEM   G   N+ T+N +I  LCK  K E+A  L   ++ SG  P+VV + +I++  
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ ALK+   M +  G    P+ +T+  ++ G C+ GRV+ A  I   M+     
Sbjct: 447 CKEGRLDKALKMVEGM-LKRG--CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 503

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +   Y +L++GY +   ++EA ++ D +  RG  P   VYN+ +     EG ++    V
Sbjct: 504 ADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRLDEIPNV 560

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             DM  +   P+  TY+I+  GLC++G V +AF     +     V D  SYNI+I+ L K
Sbjct: 561 FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFK 620

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           ++    A+Q+L  MI  G+ PD +TY TL+  +CK    + AV + +NM K    P+ V 
Sbjct: 621 ASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVT 680

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDA--ITYNTLINGYFINGKIAEAFAMFSEM 559
           YN++I+GL +   L  A  L+    R G + +   TYNT+I+     G + +A  +   M
Sbjct: 681 YNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHM 740

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G+  N V YNI I+ LCK G   +A  L+  M     + D V+YTT++    K    
Sbjct: 741 TGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQL 797

Query: 620 EEVIELHDDMV-LSGVSPDNQTYNAIISPLLGEKSAED 656
           +   +L  +MV + G+   + T+N +I      K  ++
Sbjct: 798 DRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 259/528 (49%), Gaps = 33/528 (6%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A+++++++  KG + ++  +N  +  L K ++  + ++L + +VS G+V +V T+
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-- 277
            +++  LCKE +L++AL +   MLK G  P+V+ +  ++   C+ G ++ A  +F++M  
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499

Query: 278 ---------------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
                                       V+ G    P    +N +++G+CK GR++    
Sbjct: 500 KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPN 559

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G   N++TY  ++DG  + G  +EA    + M   G +P+ V YN  I  LF
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
                + A  VL  MI   I PD  TY+ L    C+      A  +   +++  +  D  
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG-LIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           +YN LI+ L ++N L  A +L+  M+  G ++    TY T+ID  CK G ++ A+ + ++
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKI 549
           M     + N V YN  I+ LCK+  LD A SLL  S+   L D ++Y T+I G     ++
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL--SEMDTLRDEVSYTTVIIGLCKAEQL 797

Query: 550 AEAFAMFSEMRNV-GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
             A  +  EM  V G+ +    +N+LI+   K     +A  L+ +M+  G  P  +TY  
Sbjct: 798 DRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNM 857

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++T   K    ++  EL D+M + G+   + +Y  +I  L G+   ++
Sbjct: 858 VITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKE 905



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 248/538 (46%), Gaps = 41/538 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    +   TE AY++++ L   G    +  +   +  L K   + +  
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 456

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK----------------- 244
           K+ + M+  G   +V T+  ++  LC+  +++EA  ++  M+                  
Sbjct: 457 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 516

Query: 245 -------------SGI--WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
                         GI   P +  +N +++  C+ G L+    +F  M        +PN 
Sbjct: 517 CKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG---CVPNI 573

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+N +++G CK G+V+ A     +M  AG   +V +Y  +IDG  +    +EA ++ D+
Sbjct: 574 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 633

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M++ G+ P+ V YN+ +     E   + A+ +L +MI   + PD+ TY+ L  GL +   
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 693

Query: 410 VKQAFKLHNQVLEEHMVGDA-YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           +  A++L +++L    V  A  +YN +I+ LCK   L  A  L+  M   G+  + +TY 
Sbjct: 694 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 753

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             ID  CK G ++ A  +   M  +  +   V Y ++I GLCK   LD A  L +    +
Sbjct: 754 IFIDRLCKEGRLDEASSLLSEMDTLRDE---VSYTTVIIGLCKAEQLDRASKLAREMVAV 810

Query: 529 -GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL + + T+N LI+ +    ++ EA  +   M   G + + + YN++I  LCK     +
Sbjct: 811 KGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDK 870

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           A EL   M + GI+   V+YT L+         +E +++ ++M  S    D+  +  +
Sbjct: 871 AWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 169/584 (28%), Positives = 291/584 (49%), Gaps = 11/584 (1%)

Query: 75   KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV----SPLE 130
            +L L+F+ W    +R   +LES C ++HL V  +    A  L+ +      +    S ++
Sbjct: 545  RLVLDFFDWA--RSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQ 602

Query: 131  FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            F + L+ +Y+   + P VFD   +     G    A  V +K+   G  +S+ + N +L+ 
Sbjct: 603  FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 662

Query: 191  LVK-LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K   +      +++E    G   NV ++N+VI+ +C+  +++EA  L   M   G  P
Sbjct: 663  LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 722

Query: 250  NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
            +V+ ++ ++N  C+ G+L+   K+++ + VM    + PNS  +  II   C++ ++  AE
Sbjct: 723  DVISYSTVVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779

Query: 310  EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            E    MI+ GI  +   Y TLIDG+ + G    A +   EM  R + P+ + Y + I   
Sbjct: 780  EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 839

Query: 370  FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               GD+  A  +  +M  K + PD  T++ L  G C+ G +K AF++HN +++     + 
Sbjct: 840  CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 899

Query: 430  YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             +Y  LI+ LCK  +L +A +LL  M   GL P+I TY ++++G CK GNIE AV++   
Sbjct: 900  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959

Query: 490  MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGK 548
             +      + V Y ++++  CK   +D A+ +L+     GL   I T+N L+NG+ ++G 
Sbjct: 960  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019

Query: 549  IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
            + +   + + M   GIA N   +N L+   C     + A  + K M   G+ PD  TY  
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079

Query: 609  LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            LV    K  + +E   L  +M   G S    TY+ +I   L  K
Sbjct: 1080 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 1123



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 257/486 (52%), Gaps = 6/486 (1%)

Query: 147  AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            A ++ ++    Q+G  + A+ ++  +++KG++  + +++  ++   +  E+ + WKL + 
Sbjct: 690  ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749

Query: 207  MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            M   G   N   +  +I  LC+ CKL EA   +  M++ GI P+ V +  +I+  C+ GD
Sbjct: 750  MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +  A K F +M       + P+ +T+  II+GFC++G +  A ++ + M   G++ +  T
Sbjct: 810  IRAASKFFYEM---HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
            +  LI+GY + G  ++A R+ + M++ G  PN V Y + I  L  EGD++ A  +L +M 
Sbjct: 867  FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926

Query: 387  DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
               + P+ FTY+ +  GLC++G +++A KL  +     +  D  +Y  L++  CKS  + 
Sbjct: 927  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986

Query: 447  AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             A+++L  M+ +GL P I+T+  L++G+C  G +E   ++   M      PN   +NS++
Sbjct: 987  KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046

Query: 507  NGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
               C   +L AA ++ +   S+ +G  D  TY  L+ G+     + EA+ +F EM+  G 
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 1105

Query: 565  AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            +V+   Y++LI    K   + +ARE+   M   G+  D   +        K   P+ +++
Sbjct: 1106 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 1165

Query: 625  LHDDMV 630
              D+++
Sbjct: 1166 PIDEII 1171



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 36/264 (13%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           SYNI+I+++C+   +  A  LL  M ++G  PD+I+Y T+++GYC+ G ++   ++ E M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
           K+   KPN  IY SII  LC+   L  A+       R G+L D + Y TLI+G+   G I
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810

Query: 550 -----------------------------------AEAFAMFSEMRNVGIAVNKVGYNIL 574
                                               EA  +F EM   G+  + V +  L
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           IN  CK G  + A  +   MI  G  P+ VTYTTL+    K    +   EL  +M   G+
Sbjct: 871 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930

Query: 635 SPDNQTYNAIISPLLGEKSAEDQV 658
            P+  TYN+I++ L    + E+ V
Sbjct: 931 QPNIFTYNSIVNGLCKSGNIEEAV 954



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 121/300 (40%), Gaps = 45/300 (15%)

Query: 91   SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF- 149
            +H +++ C+    +V +    D L   G+L SAN        E L + ++I    P +F 
Sbjct: 888  NHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSAN--------ELLHEMWKI-GLQPNIFT 936

Query: 150  -DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
             +++V    + G  E A  ++ + +  G +     +   +    K  E+ +  ++ KEM+
Sbjct: 937  YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
              G    + TFN+++   C    LE+   L   ML  GI PN   FN ++ + C   +L+
Sbjct: 997  GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 1056

Query: 269  FALKLFRKM---GV-----------------------------MSGDSVLPNSVTHNCII 296
             A  +++ M   GV                             M G     +  T++ +I
Sbjct: 1057 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116

Query: 297  NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
             GF K  +   A E+   M + G+  +   +    D   +G   +  +   DE+++  L+
Sbjct: 1117 KGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1176


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 181/667 (27%), Positives = 315/667 (47%), Gaps = 89/667 (13%)

Query: 30  STEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNR 89
           S  D +     + L +R    L  ++  +T  L + ++ + +    L L+F  +   +  
Sbjct: 17  SPTDALLAEKALTLLKRYPYHLNSISSQITPELASYLLLQTQNDRTLTLKFINFAKPHQF 76

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE--FLEGLLDSYEICKATPA 147
           F+      C  +H+L  ++ +  A  L  +L + NSV      F + L D+Y +C ++ A
Sbjct: 77  FNP--HCKCIALHILTKFKLYKTAQNLAQDL-AENSVDEKGNYFFQCLKDTYFMCNSSSA 133

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW-KLYKE 206
           VFD +V++C+ +   E A +++   K+ G    + ++N  L  +V+  +   F  K+Y+E
Sbjct: 134 VFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYRE 193

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M++ G   NV ++N++I   C    LE  L  +  M ++   PNVV +N +I   C++  
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253

Query: 267 LEFALKLFRKMGV--------------------------------MSGDSVLPNSVTHNC 294
           ++ A KL R MG+                                M      P+ VT+N 
Sbjct: 254 IDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNT 313

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID---------------------- 332
           ++NG+CK+G    A  +   M++ G+  +V TY +LI+                      
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373

Query: 333 -------------GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
                        G+++ G  +EA R+ DEM++ G  P  V YN+ ++     G +E A+
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L  M  K + PD  +YS +  G CR   + +AF+++ +++E+ +  DA +Y+ LI  L
Sbjct: 434 GLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL 493

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C+   L  A  L   M+ + L+PD  TY +LI+GYCK G++  A+ +++ M K    P+ 
Sbjct: 494 CEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDT 553

Query: 500 VIYNSIINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNT---------------LINGY 543
           V YN +INGL K A + +A + LL+      + + ITY+T               LI G+
Sbjct: 554 VTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGF 613

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
            + G + EA  +F  M       N+  YN++I+  C+ G   +A +L K M+  G IP  
Sbjct: 614 CMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHT 673

Query: 604 VTYTTLV 610
           VT   LV
Sbjct: 674 VTIIALV 680



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 233/432 (53%), Gaps = 5/432 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV-GDLEFALKLFRKM 277
           F+LV+ +      +E+AL++      +G  P V+ +N I++   +    + FA K++R+M
Sbjct: 135 FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREM 194

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            + SG S+  N  ++N +I GFC  G +E        M +     NV TY T+I  Y + 
Sbjct: 195 -IASGVSL--NVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              +EA +L   M   GL PN + YN  I+ L   G +E    VL++M  K   PD  TY
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G C+ G   QA  LH+++L   +  D  +Y  LIN +CK+ NL  A +    M V
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHV 371

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RGL P+ +TY +LI+G+ + G ++ A ++++ M +    P +V YN+++NG C    ++ 
Sbjct: 372 RGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEE 431

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  LL+  +  GL  D ++Y+T+I G+    ++  AF M +EM   G++ + + Y+ LI 
Sbjct: 432 AIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQ 491

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LC+     +A +L + M+   ++PD  TYT+L+  + K     E + LHD+M+  G  P
Sbjct: 492 GLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551

Query: 637 DNQTYNAIISPL 648
           D  TYN +I+ L
Sbjct: 552 DTVTYNVLINGL 563



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 163/311 (52%), Gaps = 1/311 (0%)

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A ++  EM+  G+  N   YN  I    A G++E  L    +M      P+  TY+ +  
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
             C+   + +AFKL   +  E +  +  +YN++IN LC+   +     +L+ M  +G  P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D +TY TL++GYCK GN   A+ ++  M +    P++V Y S+IN +CK  +L+ A    
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                 GL  + +TY +LING+   G + EA+ ++ EM   G     V YN L+N  C  
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  ++A  L++ M   G+ PD V+Y+T++  F +    +   +++ +MV  GVSPD  TY
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 642 NAIISPLLGEK 652
           +++I  L  ++
Sbjct: 487 SSLIQGLCEQR 497



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 195/403 (48%), Gaps = 36/403 (8%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +L+    + G    A +   ++ V+G   +   + + ++   +   +   ++++ EM
Sbjct: 345 TYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM 404

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G+   + T+N ++   C   ++EEA+ L   M   G+ P+VV ++ II   C+  +L
Sbjct: 405 IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQEL 464

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M V  G  V P+++T++ +I G C+  R+  A ++   M+   +  +  TY
Sbjct: 465 DRAFQMNAEM-VEKG--VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTY 521

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI+GY + G   EAL L DEM+K+G +P+ V YN  I+ L  +     A  +L  +  
Sbjct: 522 TSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFY 581

Query: 388 KHICPDHFTYSILT---------------KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
               P+  TY  L                KG C  G + +A ++   +++ +   +   Y
Sbjct: 582 DESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVY 641

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG-YCKGGNIEGAVQVYENMK 491
           N++I+  C+  N+  A +L   M+  G IP  +T   L+   Y +G              
Sbjct: 642 NVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-------------- 687

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
            ++++ NLVI + + +  CK +  + +K+L+Q + + G +DA+
Sbjct: 688 -MDEQLNLVIRDILRS--CKLSDAELSKALVQINHKEGNIDAV 727



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 18/333 (5%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++AL+      G  E A  +++ ++ KG S  + +++  ++   +  E+ R +++ 
Sbjct: 412 TIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMN 471

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            EMV  G   +  T++ +I  LC++ +L EA  L+  ML   + P+   +  +IN  C+ 
Sbjct: 472 AEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKE 531

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE-------------- 310
           GDL  AL L  +M +  G   LP++VT+N +ING  K  R   A+               
Sbjct: 532 GDLNEALNLHDEM-IKKG--FLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588

Query: 311 IRY-AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           I Y  +I++  D   ++   LI G+   G   EA ++ + M+KR   PN  VYN  IH  
Sbjct: 589 ITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGH 648

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +G+V  A  +  +M+D    P   T   L K L   G  +Q   +   +L    + DA
Sbjct: 649 CRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDA 708

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
                L+    K  N+ A   LL+ M   G +P
Sbjct: 709 ELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/609 (27%), Positives = 295/609 (48%), Gaps = 36/609 (5%)

Query: 75  KLALEFYTWVGENNRFS--HSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           KLAL+F  WV +       H ++  C   H+LV  R +D A  ++  L   +  S   F 
Sbjct: 51  KLALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLMSGKSSFVF- 109

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             L+ +Y +C + P+VFD L+R   + G  + + ++ + + + G + S++  N  L  +V
Sbjct: 110 GALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIV 169

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  E    W   KEM+      +V TFN++I  LC E   +++  L  +M KSG  P +V
Sbjct: 170 KSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIV 229

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGV--------------------------------M 280
            +N +++  C+ G  + A++L   M +                                M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
               + PN VT+N ++NGF   G+V  A ++   M+  G+  N  T+  LIDG+   G+ 
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +EAL++   M  +GL+   V Y   +  L    + + A      M    +C    TY+ +
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GLC+NG + +A  + N++ ++ +  D  +Y+ LIN  C+   L  AK+++  +   GL
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P+ I Y TLI   C+ G ++  +++YE M      P+   +N ++  LCK   +  A+ 
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            ++     G+L +A++++ LINGY  +G+  +AF++F EM  VG       Y  L+  LC
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G    A + +K +       D V   TL+T   K+ + ++ + L  +MV   + PD+ 
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649

Query: 640 TYNAIISPL 648
           TY ++IS L
Sbjct: 650 TYTSLISGL 658



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 235/488 (48%), Gaps = 5/488 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +++  + +KG +  +  +N  +  L + N   + + L ++M       N  T+
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY 301

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N ++     E K+  A  L   ML  G+ PN V FN +I+     G+ + ALK+F    +
Sbjct: 302 NTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH---M 358

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    ++   V++  +++G CK    + A      M + G+     TY  +IDG  + G 
Sbjct: 359 MEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA+ + +EM K G+ P+ V Y++ I+     G ++ A  ++  +    + P+   YS 
Sbjct: 419 LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L    CR GC+K+  +++  ++ E    D +++N+L+  LCK+  +A A++ +  M   G
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           ++P+ +++  LI+GY   G    A  V++ M KV   P    Y S++ GLCK   L AA+
Sbjct: 539 ILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAE 598

Query: 520 SLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             L++ Q +   +D +  NTLI     +G + +A ++F EM    I  +   Y  LI+ L
Sbjct: 599 KFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGL 658

Query: 579 CKFGCYQQARELMKVMILHG-IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           C+ G    A    K     G ++P+ V YT  V    K    +        M   G++ D
Sbjct: 659 CRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRD 718

Query: 638 NQTYNAII 645
             T NA+I
Sbjct: 719 VVTTNAMI 726



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 224/485 (46%), Gaps = 46/485 (9%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++  M + G +    ++ +++  LCK  + + A   Y RM ++G+    + +  +I+  
Sbjct: 354 KMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ A+ +  +M   S D + P+ VT++ +INGFC++GR++ A+EI   + + G+ 
Sbjct: 414 CKNGFLDEAVVMLNEM---SKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLS 470

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMV------------------------------ 351
            N   Y+TLI    R G  +E +R+ + M+                              
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEF 530

Query: 352 -----KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
                  G++PN V ++  I+   + G+   A  V  +M      P  FTY  L KGLC+
Sbjct: 531 MRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A K    +       D    N LI  +CKS NL  A  L   M+ R ++PD  T
Sbjct: 591 GGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFT 650

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKK----PNLVIYNSIINGLCKDASLDAAKSLL 522
           Y +LI G C+ G    A+      K+ E +    PN V+Y   ++G+ K     A     
Sbjct: 651 YTSLISGLCRKGKTVIAILF---AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFR 707

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           Q   ++GL  D +T N +I+GY   GKI +   +  EM N     N   YNIL++   K 
Sbjct: 708 QQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKR 767

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
                +  L + MIL GI+PD +T  +++    ++   E  +++    +  GV  D  T+
Sbjct: 768 KHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTF 827

Query: 642 NAIIS 646
           N +IS
Sbjct: 828 NMLIS 832



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 220/508 (43%), Gaps = 7/508 (1%)

Query: 149  FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            FD L+      G    A+ V  ++   GH  +   + + L  L K   +    K  K + 
Sbjct: 546  FDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQ 605

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
            +     +    N +I A+CK   L++A+SL+  M++  I P+   +  +I+  C+ G   
Sbjct: 606  NVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTV 665

Query: 269  FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
             A+ LF K     G+ ++PN V + C ++G  K G+ +     R  M K G+  +V T  
Sbjct: 666  IAI-LFAKEAEARGN-LVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTN 723

Query: 329  TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
             +IDGY+R G  E+   L  EM  +   PN   YN  +H       V  +  +   MI  
Sbjct: 724  AMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILS 783

Query: 389  HICPDHFT-YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I PD  T YSI+  G+C +  ++   K+    +   +  D +++N+LI+  C +  +  
Sbjct: 784  GILPDKLTCYSIIL-GICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINW 842

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            A  +++ M   G+  D  T   ++    +    + +  V   M K    P    Y  ++N
Sbjct: 843  AFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLN 902

Query: 508  GLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLC+   +  A  + +   + +I   + +  + ++      GK  EA  +   M  + + 
Sbjct: 903  GLCRVGDIKTAFVVKEEMIAHKICPPN-VAESAMVRALAKCGKADEASLLLRSMLKMKLV 961

Query: 566  VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
                 +  L++  CK G   +A EL  VM   G+  D V+Y  L+T            EL
Sbjct: 962  PTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFEL 1021

Query: 626  HDDMVLSGVSPDNQTYNAIISPLLGEKS 653
             ++M   G   +  TY A++  +L + +
Sbjct: 1022 FEEMKRDGFLANVTTYKALVGGILSQGT 1049



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/541 (23%), Positives = 237/541 (43%), Gaps = 46/541 (8%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++  L+  C ++G  +    + + + ++G++     +N  ++ L K  ++    +  + M
Sbjct: 475  IYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP------------------ 249
             S G + N  +F+ +I       +  +A S++  M K G  P                  
Sbjct: 535  TSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 250  -----------------NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
                             + V  N +I   C+ G+L+ A+ LF   G M   S+LP+S T+
Sbjct: 595  IAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLF---GEMVQRSILPDSFTY 651

Query: 293  NCIINGFCKLGR----VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              +I+G C+ G+    + FA+E   A  +  +  N   Y   +DG  + G  +       
Sbjct: 652  TSLISGLCRKGKTVIAILFAKE---AEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQ 708

Query: 349  EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            +M K GL  + V  N+ I      G +E    +L +M +++  P+  TY+IL  G  +  
Sbjct: 709  QMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRK 768

Query: 409  CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
             V  +F L+  ++   ++ D  +   +I  +C+SN L    ++L + I RG+  D  T+ 
Sbjct: 769  HVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFN 828

Query: 469  TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             LI   C  G I  A  +   M  +    +    ++I++ L ++     ++ +L    + 
Sbjct: 829  MLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 529  GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
            G+  ++  Y  L+NG    G I  AF +  EM    I    V  + ++  L K G   +A
Sbjct: 889  GISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 588  RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
              L++ M+   ++P   ++TTL+  F KN +  E +EL   M   G+  D  +YN +I+ 
Sbjct: 949  SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITG 1008

Query: 648  L 648
            L
Sbjct: 1009 L 1009



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/396 (23%), Positives = 185/396 (46%), Gaps = 6/396 (1%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++   V    + G  +  +   Q++   G +  +   N  +    ++ +I +   L  EM
Sbjct: 686  MYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEM 745

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN-VVCFNMIINEACQVGD 266
             +     N+ T+N++++   K   +  +  LY  M+ SGI P+ + C+++I+   C+   
Sbjct: 746  GNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILG-ICESNM 804

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            LE  LK+ +   +  G  V  +  T N +I+  C  G + +A ++   M   GI  +  T
Sbjct: 805  LEIGLKILKAF-ICRGVEV--DRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNT 861

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
               ++    R    +E+  +  EM K+G+ P +  Y   ++ L   GD++ A  V  +MI
Sbjct: 862  CDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMI 921

Query: 387  DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
               ICP +   S + + L + G   +A  L   +L+  +V    S+  L++  CK+ N+ 
Sbjct: 922  AHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVT 981

Query: 447  AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             A +L   M   GL  D+++Y  LI G C  G++  A +++E MK+     N+  Y +++
Sbjct: 982  EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041

Query: 507  NG-LCKDASLDAAKSLLQASQRIGLLDAITYNTLIN 541
             G L +         +L+     G + A+++N +IN
Sbjct: 1042 GGILSQGTEFSGTDIILKDLLARGFITAMSFNHMIN 1077



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 195/433 (45%), Gaps = 7/433 (1%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA-WNNFLSHLVKLNEIGRFWKLYKE 206
             + +L+    + G T  A    ++ + +G+ V     +  F+  + K  +    +   ++
Sbjct: 650  TYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQ 709

Query: 207  MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            M   G   +V T N +I    +  K+E+   L + M      PN+  +N++++   +   
Sbjct: 710  MDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKH 769

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +  +  L+R M ++SG  +LP+ +T   II G C+   +E   +I  A I  G++ +  T
Sbjct: 770  VSTSFMLYRSM-ILSG--ILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHT 826

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
            +  LI      G    A  + + M   G+  +    ++ +  L      + +  VL +M 
Sbjct: 827  FNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMS 886

Query: 387  DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
             + I P+   Y  L  GLCR G +K AF +  +++   +     + + ++  L K     
Sbjct: 887  KQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 447  AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             A  LL SM+   L+P I ++ TL+  +CK GN+  A+++   M     K +LV YN +I
Sbjct: 947  EASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 507  NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING-KIAEAFAMFSEMRNVGI 564
             GLC    +  A  L +  +R G L +  TY  L+ G    G + +    +  ++   G 
Sbjct: 1007 TGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGF 1066

Query: 565  AVNKVGYNILINF 577
             +  + +N +INF
Sbjct: 1067 -ITAMSFNHMINF 1078



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 7/224 (3%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           ++ILI    +   +  + ++   M + G  P + T   ++    K       V V+  +K
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCE---DVSVWSFLK 182

Query: 492 KVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
           ++ K+   P++  +N +IN LC + S   +  L+Q  ++ G    I TYNT+++ Y   G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +   A  +   M   G+  +   YN+LI+ LC+     +   L++ M    I P+ VTY 
Sbjct: 243 RFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           TL+  FS         +L ++M+  G+SP++ T+NA+I   + E
Sbjct: 303 TLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISE 346



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 40/83 (48%)

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           ++ILI    + G  Q + E+ ++M L+G  P   T   ++    K+C    V     +M+
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEML 185

Query: 631 LSGVSPDNQTYNAIISPLLGEKS 653
              + PD  T+N +I+ L  E S
Sbjct: 186 KRKICPDVATFNILINVLCAEGS 208


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 169/584 (28%), Positives = 287/584 (49%), Gaps = 11/584 (1%)

Query: 75   KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV----SPLE 130
            +L L+F+ W    +R   +LES C ++HL V  +    A  L+ +      +    S ++
Sbjct: 525  RLVLDFFDWA--RSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQ 582

Query: 131  FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            F + L+ +Y+   + P VFD   +   + G    A  V +K+   G  +S+ + N +L+ 
Sbjct: 583  FFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLAR 642

Query: 191  LVK-LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K  N+      +++E    G   NV ++N+VI+ +C+  ++ EA  L   M   G  P
Sbjct: 643  LSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTP 702

Query: 250  NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
            +V+ ++ +IN  C+ G+L+   KL  KM       + PNS T+  II   C++ ++  AE
Sbjct: 703  DVISYSTVINGYCRFGELDKVWKLIEKM---KQKGLKPNSYTYGSIIGLLCRICKLAEAE 759

Query: 310  EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            E    MI  GI  +   Y TL+DG+ + G    A +   EM  R + P+ + Y + I   
Sbjct: 760  EAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 819

Query: 370  FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               GD+  A  +  +M+ + + PD  T++ L  G C+ G +K AF++HN +++     + 
Sbjct: 820  CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879

Query: 430  YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             +Y  LI+ LCK  +L +A +LL  M   GL P+I TY ++++G CK GNIE AV++   
Sbjct: 880  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939

Query: 490  MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGK 548
             +      + V Y ++++  CK   +D A+ +L      GL   I T+N L+NG+ ++G 
Sbjct: 940  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999

Query: 549  IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
            + +   + + M   GIA N   +N L+   C     + A  + K M   G+ PD  TY  
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059

Query: 609  LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            LV       + +E   L  +M   G S    TY+ +I      K
Sbjct: 1060 LVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 257/485 (52%), Gaps = 4/485 (0%)

Query: 147  AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            A ++ ++    Q+G    A+ ++  +++KG++  + +++  ++   +  E+ + WKL ++
Sbjct: 670  ASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEK 729

Query: 207  MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            M   G   N  T+  +I  LC+ CKL EA   +  M+  GI P+ + +  +++  C+ GD
Sbjct: 730  MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +  A K F +M       + P+ +T+  II+GFC++G +  A ++ + M+  G++ ++ T
Sbjct: 790  IRAASKFFYEM---HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIIT 846

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
            +  L++GY + G  ++A R+ + M++ G  PN V Y + I  L  EGD++ A  +L +M 
Sbjct: 847  FTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 906

Query: 387  DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
               + P+ FTY+ +  GLC++G +++A KL  +     +  D  +Y  L++  CKS  + 
Sbjct: 907  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 966

Query: 447  AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             A+++L+ M+ +GL P I+T+  L++G+C  G +E   ++   M      PN   +N ++
Sbjct: 967  KAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026

Query: 507  NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
               C   +L AA ++ +     G+  D  TY  L+ G+     + EA+ +F EM+  G +
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFS 1086

Query: 566  VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            V+   Y++LI    K   + +ARE+   M   G+  D   +        K   P+ +++ 
Sbjct: 1087 VSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDP 1146

Query: 626  HDDMV 630
             D+++
Sbjct: 1147 IDEII 1151



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 125/266 (46%), Gaps = 40/266 (15%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           SYNI+I+++C+   +  A  LL  M ++G  PD+I+Y T+I+GYC+ G ++   ++ E M
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG---LLDAITYNTLINGYFING 547
           K+   KPN   Y SII  LC+   L  A+     S+ IG   L D I Y TL++G+   G
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAF--SEMIGQGILPDTIVYTTLVDGFCKRG 788

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD----- 602
            I  A   F EM +  I  + + Y  +I+  C+ G   +A +L   M+  G+ PD     
Sbjct: 789 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848

Query: 603 ------------------------------YVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
                                          VTYTTL+    K    +   EL  +M   
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 908

Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
           G+ P+  TYN+I++ L    + E+ V
Sbjct: 909 GLQPNIFTYNSIVNGLCKSGNIEEAV 934



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 45/300 (15%)

Query: 91   SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF- 149
            +H +++ C+    +V +    D L   G+L SAN        E L + ++I    P +F 
Sbjct: 868  NHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSAN--------ELLHEMWKI-GLQPNIFT 916

Query: 150  -DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
             +++V    + G  E A  ++ + +  G +     +   +    K  E+ +  ++  EM+
Sbjct: 917  YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEML 976

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
              G    + TFN+++   C    LE+   L   ML  GI PN   FN ++ + C   +L+
Sbjct: 977  GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLK 1036

Query: 269  FALKLFRKM---GV-----------------------------MSGDSVLPNSVTHNCII 296
             A  +++ M   GV                             M G     +  T++ +I
Sbjct: 1037 AATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1096

Query: 297  NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
             GF K  +   A EI   M + G+  +   +    D   +G   +  +   DE+++  L+
Sbjct: 1097 KGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 1156


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 267/502 (53%), Gaps = 4/502 (0%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P VFD L+R  TQ      A++  + L      V   A N  L+ L +        + Y+
Sbjct: 87  PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYR 146

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            ++S     N  T N+++++ CK  + ++A ++   M K  ++P+VV  N++I+   + G
Sbjct: 147 LVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAG 206

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D++ A+ L   +  M+   + P  VT N ++ G CK  R + A+E+  AM +  +  +VR
Sbjct: 207 DVDAAIAL---VDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVR 263

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           ++  LI G+ R G  EEA++   EM +RG+ P+ V ++  I      G ++ A   L +M
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM 323

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD   Y+++  G CR G + +A ++ ++++    + D  +YN L+N LCK + L
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRL 383

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A++LL+ M  RG+ PD+ T+ TLI GYC+ GN E A+Q+++ +     +P++V YNS+
Sbjct: 384 LDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSL 443

Query: 506 INGLCKDASLDAAKSLLQASQ-RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+G+C+   L  A  L      R    + +TY+ LI+ +   G++ EAF    EM + G 
Sbjct: 444 IDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGN 503

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N + YN +I   C+ G  ++ ++ ++ M+   I+PD +T+ TL+  + K  +      
Sbjct: 504 LPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFN 563

Query: 625 LHDDMVLSGVSPDNQTYNAIIS 646
           + + M    V PD  TYN II+
Sbjct: 564 VFNIMEKEMVQPDAVTYNMIIN 585



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 140/438 (31%), Positives = 239/438 (54%), Gaps = 4/438 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   M + G    + TFN V+  LCK  + ++A  ++  M +  + P+V  FN++I   C
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +VG++E A+K +++M       V P+ V+ +C+I  F   G+++ A      M   G+  
Sbjct: 274 RVGEVEEAMKFYKEM---QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVP 330

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +   Y  +I G+ R GS  EALR+ DEMV  G +P+ V YN+ ++ L  +  +  A  +L
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M ++ + PD  T++ L  G CR+G  ++A +L + +L + +  D  +YN LI+ +C+ 
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRK 450

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +LA A +L   M  R + P+ +TY  LID +C+ G +E A    + M      PN++ Y
Sbjct: 451 GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTY 510

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NSII G C+  ++   +  LQ   +  +L D IT+NTLI+GY     +  AF +F+ M  
Sbjct: 511 NSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +  + V YN++IN   + G  ++A  + K M   GI PD  TY +L+       + +E
Sbjct: 571 EMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKE 630

Query: 622 VIELHDDMVLSGVSPDNQ 639
             +LHD+M+  G +PD++
Sbjct: 631 AFQLHDEMMHRGFAPDDK 648



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 230/451 (50%), Gaps = 33/451 (7%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           + L+ A  + G  + A  ++  +  KG    I  +N+ L  L K     +  ++++ M  
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQ 255

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
           C    +V +FN++I   C+  ++EEA+  Y  M + G+ P+VV F+ +I      G ++ 
Sbjct: 256 CSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDH 315

Query: 270 ALKLFRKM----------------------GVMS----------GDSVLPNSVTHNCIIN 297
           A    R+M                      G MS          G   LP+ VT+N ++N
Sbjct: 316 AAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLN 375

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK  R+  AEE+   M + G+  ++ T+ TLI GY R G+ E+AL+L D ++ + L P
Sbjct: 376 GLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + V YNS I  +  +GD+  A  +  DM  + I P+H TYSIL    C  G V++AF   
Sbjct: 436 DVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFL 495

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           ++++ +  + +  +YN +I   C+S N+   +Q L  M+   ++PD+IT+ TLI GY K 
Sbjct: 496 DEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKE 555

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
            N+ GA  V+  M+K   +P+ V YN IING  +  +++ A  + +     G+  D  TY
Sbjct: 556 ENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTY 615

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            +LING+   G   EAF +  EM + G A +
Sbjct: 616 MSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 161/500 (32%), Positives = 261/500 (52%), Gaps = 6/500 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L++   Q G +  A D+   +K         ++N  ++ L K   +    +L+KEM 
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 N  TF+ +I   CK   +EE   L   M K G+  +V  ++ +I+  C  GD+E
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
              +LF +M      +V PN VT++C++N  CK  + + A ++   M    +  +V  Y 
Sbjct: 252 RGKELFNEM---LRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYT 308

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L DG ++ G + +A+++ D MVKRG  PNNV YN+ I+ L  EG V+ AL +L  M  K
Sbjct: 309 VLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKK 368

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL--EEHMVGDAYSYNILINYLCKSNNLA 446
              PD  TYS L KGLC  G + +A  L N ++  E H+  D +++N++I  LCK   L 
Sbjct: 369 GKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLR 428

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK++  +M+ RG   +I+TY  LIDGY   G +  A++++++       PN   Y  +I
Sbjct: 429 HAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLI 488

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLCK   L  AK L    +  G    ++ YNTL+        + +A  +F EMRN    
Sbjct: 489 NGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD 548

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + V +NI+I+   K G  + A+EL+  M+   ++PD +T++ L+ RF K    +E   L
Sbjct: 549 PDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASL 608

Query: 626 HDDMVLSGVSPDNQTYNAII 645
           ++ MV  G  PD   +++++
Sbjct: 609 YERMVSCGHVPDAVLFDSLL 628



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 223/448 (49%), Gaps = 6/448 (1%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G+  NV  FNL++   C+     +A+ L+  M ++ + P+ V +N +IN  C+   L  A
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            +LF++M    G    PNSVT + +I+GFCK G VE    +   M K G++ +V  Y+ L
Sbjct: 184 KELFKEM---KGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I G+   G  E    L +EM+++ + PN V Y+  ++ L  +   + A  +L  M    +
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKV 300

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD   Y++L  GL +NG    A K+ + +++     +  +YN +IN LCK   +  A  
Sbjct: 301 RPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALG 360

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVIYNSIING 508
           +L +M  +G  PD++TY TL+ G C  G I+ AV +   +  K+   KP++  +N +I  
Sbjct: 361 ILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQE 420

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK   L  AK +       G   + +TYN LI+GY   GK+ +A  ++ +  + GI+ N
Sbjct: 421 LCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPN 480

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              Y +LIN LCK      A+ L       G  P    Y TL+    +  S E+   L  
Sbjct: 481 AATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQ 540

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +M  +   PD  ++N II   L     E
Sbjct: 541 EMRNANHDPDVVSFNIIIDGTLKAGDVE 568



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 253/517 (48%), Gaps = 23/517 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     F AL+    + G  E  + ++++++  G    +  ++  +S      +I R  
Sbjct: 195 CKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGK 254

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ EM+      NV T++ ++ ALCK+ K +EA  +   M    + P+VV + ++ +  
Sbjct: 255 ELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGL 314

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G    A+K+   M V  G+   PN+VT+N IING CK GRV+ A  I   M K G  
Sbjct: 315 SKNGRASDAIKVLDLM-VKRGEE--PNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKR--GLMPNNVVYNSTIHWLFAEGDVEGAL 379
            +V TY+TL+ G    G  +EA+ L + ++ +   + P+   +N  I  L  +  +  A 
Sbjct: 372 PDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAK 431

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V   M+++    +  TY+IL  G    G + +A +L    ++  +  +A +Y +LIN L
Sbjct: 432 RVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   L+ AK L +     G  P +  Y TL+   C+  ++E A  +++ M+     P++
Sbjct: 492 CKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDV 551

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V +N II+G  K   +++AK LL     + L+ D IT++ LIN +   G++ EA +++  
Sbjct: 552 VSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYER 611

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT------- 611
           M + G   + V ++ L+      G  ++   +++ M    ++ D    +T++        
Sbjct: 612 MVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671

Query: 612 ---------RFSKNCSPEEVIELHD-DMVLSGVSPDN 638
                    +FS++ S    I+ ++  M L+ V PDN
Sbjct: 672 DVDIEKILPKFSQHTSVGASIKCNELLMKLNKVHPDN 708



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 153/302 (50%), Gaps = 1/302 (0%)

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+    N+ I  L      +  + V S M    + P   + S L +          AF 
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   +++     + Y++N+L+   C+S +   A  L   M    LIPD ++Y T+I+G C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           KG  +  A ++++ MK  E KPN V ++++I+G CK+  ++    LL+  +++GL  D  
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y+ LI+G+   G I     +F+EM    +  N V Y+ L+N LCK   +++A +++  M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
               + PD V YT L    SKN    + I++ D MV  G  P+N TYNAII+ L  E   
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 655 ED 656
           +D
Sbjct: 356 DD 357



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 189/430 (43%), Gaps = 51/430 (11%)

Query: 232 LEEALSLYYRMLKSGIWPNVV----CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           L E+LS ++  L+   +PN +      N +I+   +    +  + +  KM  +S   V P
Sbjct: 38  LSESLSHFHHTLQD--YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVS---VFP 92

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL- 346
              + + +I  F    +  FA  +   ++K G   NV  +  L+ G+ + G S +A+ L 
Sbjct: 93  CFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLF 152

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
           C  M+KR  +                                   PD  +Y+ +  GLC+
Sbjct: 153 C--MMKRNCL----------------------------------IPDCVSYNTVINGLCK 176

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
              + +A +L  ++       ++ +++ LI+  CK+ ++     LL  M   GL  D+  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI G+C  G+IE   +++  M +    PN+V Y+ ++N LCK      A  +L    
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
              +  D + Y  L +G   NG+ ++A  +   M   G   N V YN +IN LCK G   
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG---VSPDNQTYN 642
            A  +++ M   G  PD VTY+TLV         +E ++L  ++++S    + PD   +N
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL-NLLMSKEFHIKPDVFAFN 415

Query: 643 AIISPLLGEK 652
            +I  L  ++
Sbjct: 416 LVIQELCKQR 425



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 1/331 (0%)

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLID   +    +  + +  +M    + P     ++ I           A  VL  ++ +
Sbjct: 64  TLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKR 123

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               + + +++L KG C++G   +A  L   +    ++ D  SYN +IN LCK   L  A
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K+L   M      P+ +T+  LIDG+CK G++E    + E M+K+  + ++ +Y+++I+G
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C    ++  K L     R  +  + +TY+ L+N      K  EA  M   M    +  +
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y +L + L K G    A +++ +M+  G  P+ VTY  ++    K    ++ + + +
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILE 363

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            M   G  PD  TY+ ++  L G    ++ V
Sbjct: 364 TMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 192/412 (46%), Gaps = 10/412 (2%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +LD+   CK  P V  +  L    ++ G    A  V+  +  +G   +   +N  ++ L 
Sbjct: 291 MLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLC 350

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS--GIWPN 250
           K   +     + + M   G   +V T++ ++  LC   K++EA+ L   ++     I P+
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPD 410

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP-NSVTHNCIINGFCKLGRVEFAE 309
           V  FN++I E C+   L  A +++  M V  G    P N VT+N +I+G+   G++  A 
Sbjct: 411 VFAFNLVIQELCKQRRLRHAKRVYYTM-VERG---FPSNIVTYNILIDGYLSAGKLTKAL 466

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E+    + +GI  N  TY  LI+G  +      A  L ++    G  P    YN+ +  L
Sbjct: 467 ELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASL 526

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             E  VE A  +  +M + +  PD  +++I+  G  + G V+ A +L  ++L  ++V D 
Sbjct: 527 CRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDN 586

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +++ILIN   K   L  A  L   M+  G +PD + + +L+ GY   G  E  V + + 
Sbjct: 587 ITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQ 646

Query: 490 MKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLI 540
           M   +   +  + ++I+  LC     +D  K L + SQ   +  +I  N L+
Sbjct: 647 MADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELL 698


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/567 (28%), Positives = 291/567 (51%), Gaps = 33/567 (5%)

Query: 109 RFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA--- 161
           R D     +GN++      ++++    L+GL       K T    D ++R  TQ+G    
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCAD----KRTSDAMDIVLRRMTQLGCIPN 161

Query: 162 ----------------TEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKL 203
                           ++ A +++Q +   G      + ++   ++   K  ++ + +  
Sbjct: 162 VFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y EM+  G + NV T+N +I ALCK   +++A+ +   M+K+G+ PN   +N I++  C 
Sbjct: 222 YHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G  + A+   +KM     D V P+ VT+N +++  CK GR   A ++  +M K G+   
Sbjct: 282 SGQPKEAIGFLKKM---HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY TL+ GYA  G+  E   L D MV+ G+ PN+ V++  I     +G V+ A+ V S
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  + + PD  TY  +   LC++G V+ A +   Q+++E +      YN LI+ LC  +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               AK+L+  M+ RG+  D I + ++ID +CK G +  + ++++ M ++  KPN++ Y+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYS 518

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G C    +D A  LL +   +G+  D +TYNTLINGY    ++ +A  +F EM + 
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G++ + + YNI++  L +      A+EL   +   G   +  TY  ++    KN   +E 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +  ++ L+ +  + +T+N +I  LL
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 202/425 (47%), Gaps = 15/425 (3%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE-----FALKLFRKMGVMSGDSVLP 287
           E+A  ++  +L+ G   ++   N      C + D+       A+  + +M     D V P
Sbjct: 36  EDARHVFDELLRRGRGASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTP 89

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+  +I   C  GR++        +IK G   +   +  L+ G      + +A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 348 -DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HICPDHFTYSILTKGL 404
              M + G +PN   YN  +  L  E   + AL +L  M D      PD  +Y+ +  G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G + +A+  ++++L+  ++ +  +YN +I  LCK+  +  A ++L+SM+  G++P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY +++ GYC  G  + A+   + M     +P++V YNS+++ LCK+     A+ +  +
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             + GL   I TY TL+ GY   G + E   +   M   GI  N   ++ILI    K G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             QA  +   M   G+ PD VTY T++    K+   E+ +   + M+   +SP N  YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 644 IISPL 648
           +I  L
Sbjct: 450 LIHSL 454



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 205/441 (46%), Gaps = 4/441 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+    + G    A  +   +  +G    I  +   L        +     L   M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   N   F+++I A  K+ K+++A+ ++ +M + G+ P+ V +  +I   C+ G +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A++ F +M     + + P ++ +N +I+  C   + + A+E+   M+  GI  +   +
Sbjct: 426 EDAMRYFEQM---IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            ++ID + + G   E+ +L D MV+ G+ PN + Y++ I      G ++ A  +L+ M+ 
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  TY+ L  G C+   ++ A  L  ++    +  D  +YNI++  L ++   AA
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK+L   +   G   ++ TY  ++ G CK    + A+++++N+   + +     +N +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L K    D AK L  A    GL+ D  TY+ +       G + E   +F  M   G   
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 567 NKVGYNILINFLCKFGCYQQA 587
           N    N ++  L + G   +A
Sbjct: 723 NSRMLNSIVRKLLQRGDITRA 743



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+ A  + G  + A  V  K++ +G +     +   +  L K   +    + +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +          +N +I++LC   K ++A  L   ML  GI  + + FN II+  C+ G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V PN +T++ +I+G+C  G+++ A ++  +M+  G+  +  TY
Sbjct: 496 IESEKLF---DLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY +    E+AL L  EM   G+ P+ + YN  +  LF       A  +   + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K      
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +++   GL+PD+ TY  + +   + G +E    ++ +M++     N  + NSI+ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 142/322 (44%), Gaps = 25/322 (7%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA-----TPAVFDALV 153
           +++H L  + ++D A  L+  ++         F   ++DS+  CK      +  +FD +V
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH--CKEGRVIESEKLFDLMV 506

Query: 154 RACTQ---------------IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           R   +                G  + A  ++  +   G       +N  ++   K++ + 
Sbjct: 507 RIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L++EM S G   ++ T+N+++  L +  +   A  LY  + +SG    +  +N+I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +  C+    + AL++F+ + +     +   + T N +I    K+GR + A+++  A+   
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD---LQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  +VRTY+ + +     G  EE   L   M + G   N+ + NS +  L   GD+  A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743

Query: 379 LFVLSDMIDKHICPDHFTYSIL 400
              L  + +KH   +  T S+ 
Sbjct: 744 GTYLFMIDEKHFSLEASTASLF 765


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 311/627 (49%), Gaps = 39/627 (6%)

Query: 57  SLTNSLVNRVVSEFRK-SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           +L+ ++V+ V+   R   P +A+ F+ ++     F HS+ S   + H+L    RF +   
Sbjct: 79  TLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDS 138

Query: 116 LMGNLMSANSVSPLEFL-EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           ++ NL+    +     + + LL+ +    +   V+D L  A ++      A  VI K+K 
Sbjct: 139 VIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKD 198

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
                S+  +N+ L H ++  +I   W +Y E+   G  ++  T +++I+ LC++ KLE+
Sbjct: 199 LNFQASVPTYNSLL-HNMRHTDI--MWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLED 255

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF-------------------- 274
           A+S  +   K  + P++V  N I+++ C+VG ++ A   F                    
Sbjct: 256 AISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLH 314

Query: 275 ---------RKMGV---MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                      +G    M    V P+ VT+N +  GF  LG +  A ++   M+  G++ 
Sbjct: 315 GLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNP 374

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ TY TLI G+ + G+ EEAL+L  E + RG   N + YN  +  L   G +E AL + 
Sbjct: 375 DLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF 434

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M    + PD   YSIL  GLC+ G V++A++L+ Q+  +      ++   ++  L K+
Sbjct: 435 DEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN 494

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N++ A+    +     L+ D++ Y  +IDGY +   I  A+Q+Y  M +    P++V +
Sbjct: 495 GNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++ING C+   L  A+ +L+  +  GL+ + +TY TL+N Y   G + E F    EM  
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEA 614

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +    V Y +LI  LC+     ++ +L++ M   G++PD VTY T++  F K     +
Sbjct: 615 NAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITK 674

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
            ++L++ M+L    P   TY  +I+ L
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINAL 701



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 247/503 (49%), Gaps = 6/503 (1%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           G  D  E     P V  ++ L +    +G   GA  V+QK+ ++G +  +  +   +   
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            ++  I    KL +E +S G+  NV  +N+++  LCK  ++EEAL+L+  M    + P+ 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + ++++I+  C+ G ++ A +L+ +M +       P+      ++ G  K G +  A   
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRK---FPHHFAQRAVLLGLFKNGNISEARNY 503

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
                +  +  +V  Y  +IDGY R     EA++L  +M++RG+ P+ V +N+ I+    
Sbjct: 504 FDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCR 563

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            GD+  A  +L  +  K + P   TY+ L    C  G +++ F   +++    +V    +
Sbjct: 564 RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVT 623

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y +LI  LC+ N +  + QLL  M  +GL+PD +TY T+I  +CKG  I  A+Q+Y  M 
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML 683

Query: 492 KVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
                P  V Y  +IN LC    L D  + ++    R   L  +TY T+I  +   G+++
Sbjct: 684 LHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVS 743

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A   F++M   G  ++   Y+ +IN LCK G   +A+    +M+  G+ PD     T++
Sbjct: 744 KALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVL 803

Query: 611 TRFSKNCSPEEVIELHDDMVLSG 633
             F +  +   V E    +V SG
Sbjct: 804 NAFHQQGNNSSVFEFLAMVVKSG 826


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 183/644 (28%), Positives = 306/644 (47%), Gaps = 49/644 (7%)

Query: 56  PSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           PSL  SL+N       ++P   L+FYT++  +    HS     +++  ++ +R F  A  
Sbjct: 33  PSLLISLLNS--KTLIQNPNTLLQFYTYLPPSITH-HSPLPLLSLLPSILRYRHFYAAKS 89

Query: 116 LMGNLMSANSVSPLEFL----EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           L+ + +  +  S L +L    +   +       +  + D  + A    G    A  +  +
Sbjct: 90  LLSSFIPVDKSSSLHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIFNR 149

Query: 172 LKVKGHSVSIHAWNNFLSHLVKL---NEIGRFWKLYKEMVSCGYVENVNTFNLVIYA--- 225
           +K  G   ++   N  L+ LV+    + I     ++ + +  G   N N+FN++I+    
Sbjct: 150 MKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCM 209

Query: 226 --------------------------------LCKECKLEEALSLYYRMLKSGIWPNVVC 253
                                           LCK+ +L EA  L   M   G++PN   
Sbjct: 210 ENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTT 269

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           FN+++   C++G L+ A  +     +MS +SV+P++ T+N +I+GFCK GR+  A  +R 
Sbjct: 270 FNILVVGCCRLGWLKEAANVIE---LMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLRE 326

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M    +  +V TY TLI+G    GSSEE  +L +EM  RG+ PN+V YN  + W   +G
Sbjct: 327 EMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKG 386

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++     +  M +    PD  TY+ L    C+ G + +AF+L +++  + +  D  + N
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLN 446

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            ++  LC+   L  A  LL S   RG   D ++YGTLI GY K      A+++++ MK+ 
Sbjct: 447 TMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK 506

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
           E  P+++ YNS+I GLC+    + A   L      GL+ D ITYNT+I+GY   G++ +A
Sbjct: 507 EIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKA 566

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           F   ++M       + V  N L+  LCK G  ++A +L    I  G   D V+Y T++  
Sbjct: 567 FQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILS 626

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             K     E  +L ++M    + PD  TYNAI+  L      +D
Sbjct: 627 LCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKD 670



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 202/425 (47%), Gaps = 8/425 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW--NNFLSHLVKLNEIGRFWKLY 204
             F+ LV  C ++G  + A +VI+ +    +SV   AW  N  +S   K   I    +L 
Sbjct: 268 TTFNILVVGCCRLGWLKEAANVIELMS--QNSVVPDAWTYNVMISGFCKQGRIAEAMRLR 325

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           +EM +     +V T+N +I    +    EE   L   M   G+ PN V +N+++    + 
Sbjct: 326 EEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKK 385

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G ++   K  RK   M     LP+ VT+N +I+  CK+G+++ A  +   M + G+  + 
Sbjct: 386 GKMDEVDKTVRK---MEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDD 442

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T  T++    R    +EA  L     +RG   + V Y + I   F       AL +  +
Sbjct: 443 VTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDE 502

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M +K I P   TY+ +  GLC+ G   QA    +++LE  +V D  +YN +I+  C+   
Sbjct: 503 MKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQ 562

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A Q  + M+ +   PD++T  TL+ G CK G +E A++++       K  + V YN+
Sbjct: 563 VEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNT 622

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           II  LCK+     A  LL+  +   L  D  TYN ++ G    G++ +A    S++   G
Sbjct: 623 IILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682

Query: 564 IAVNK 568
            + N+
Sbjct: 683 KSENQ 687



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 224/466 (48%), Gaps = 30/466 (6%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           LMS NSV P        D++         ++ ++    + G    A  + ++++    S 
Sbjct: 292 LMSQNSVVP--------DAW--------TYNVMISGFCKQGRIAEAMRLREEMENLKLSP 335

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
            +  +N  ++   +       +KL +EM   G   N  T+N+++    K+ K++E     
Sbjct: 336 DVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTV 395

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M +SG  P++V +N +I+  C+VG ++ A +L  +MG      +  + VT N ++   
Sbjct: 396 RKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMG---RKGLKMDDVTLNTMLRAL 452

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C+  +++ A ++  +  + G   +  +Y TLI GY +   + +ALRL DEM ++ ++P+ 
Sbjct: 453 CRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSI 512

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + YNS I  L   G    A+  L ++++  + PD  TY+ +  G C+ G V++AF+ HN+
Sbjct: 513 ITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNK 572

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++E++   D  + N L+  LCK   L  A +L ++ I +G   D ++Y T+I   CK   
Sbjct: 573 MVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKR 632

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
              A  + E M++ +  P+   YN+I+ GL     +  A+  +      G  +       
Sbjct: 633 FGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSE------- 685

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            N +   GK  +A    SE+       N + Y+  IN LC  G Y+
Sbjct: 686 -NQFLELGKRQDART--SEIPQEP-HPNAIAYSNKINELCSQGRYK 727


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 274/527 (51%), Gaps = 11/527 (2%)

Query: 129 LEFLEGLLDSYEICKATPA------VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
           L+ L+  +  ++ C   P         + L+ A  +    + AYD+ +  +    S    
Sbjct: 109 LDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSI 168

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            ++  ++   K  +  + ++L  EM   G V +   +N +I  LC   +++ AL ++YR 
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRD 227

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           ++    P+V+ + ++++  C+   +  A  +   M + +G    PN VT+N +INGFCKL
Sbjct: 228 MQRNCAPSVITYTILVDALCKSARISDASLILEDM-IEAG--CAPNVVTYNTLINGFCKL 284

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G ++ A  +   M++     +V TY  LIDGY +    ++  +L  EMVK G  PN + Y
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ +  L   G    A  +   M+ +   P HFT++++    C+ G +  A++L   + +
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 404

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
              + D Y+YNI+I+  C++N +  A+QLL  M   G  PD++TY +++ G CK   ++ 
Sbjct: 405 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 464

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLIN 541
           A +VYE ++      ++V  +++I+GLCK   LD A+ LL+  +R G   D + Y  LI+
Sbjct: 465 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 524

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G+    ++ ++ A FSEM + G     + Y+I+I+ LCK    +    L+K M+  G+ P
Sbjct: 525 GFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTP 584

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D + YT+++    K+ S +E  EL+  M  +G +P   TYN ++  L
Sbjct: 585 DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 291/638 (45%), Gaps = 66/638 (10%)

Query: 58  LTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLM 117
           L  S+V RV+ +     K A++F+ W      + HS  +   ++   V  ++  +A  L 
Sbjct: 97  LVPSVVGRVLQQLDDLDK-AVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLF 155

Query: 118 GN----LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
            N    L S +S++    + G       CKA                  + AY ++ +++
Sbjct: 156 KNHRCGLCSPDSITYSTLINGF------CKAR---------------DFQQAYRLLDEME 194

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            +G       +N  +  L     +      Y++M       +V T+ +++ ALCK  ++ 
Sbjct: 195 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARIS 253

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +A  +   M+++G  PNVV +N +IN  C++G+++ A+ LF +M     +S  P+  T+N
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM---LENSCSPDVFTYN 310

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I+G+CK  R +   ++   M+K G + N  TY TL+D   + G   +A  L   M++R
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
              P++  +N  I      G ++ A  +   M D+   PD +TY+I+  G CR   +  A
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 430

Query: 414 FKLHNQVLEEHMVGDAYSYN-----------------------------------ILINY 438
            +L  ++ E     D  +YN                                    LI+ 
Sbjct: 431 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 490

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LCKS  L  A++LL  M   G  PD++ Y  LI G+CK   ++ ++  +  M      P 
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 550

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           ++ Y+ +I+ LCK A +     LL+     G+  DAI Y ++I+G   +    EA+ ++ 
Sbjct: 551 VITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYK 610

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            M+  G A   V YN+L++ LCK     +A  L++VM   G +PD VTY ++   F K+ 
Sbjct: 611 LMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSA 670

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             ++   L   M   G SP    Y+ +++ L+ E+  +
Sbjct: 671 EHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMD 708



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 236/483 (48%), Gaps = 7/483 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN-TFNLVIYALCKECKLEE 234
           G+  S    N  LS  V+  +    + L+K    CG     + T++ +I   CK    ++
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNH-RCGLCSPDSITYSTLINGFCKARDFQQ 185

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L   M K GI P+   +N II   C  G ++ AL  +R M      +  P+ +T+  
Sbjct: 186 AYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ----RNCAPSVITYTI 241

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +++  CK  R+  A  I   MI+AG   NV TY TLI+G+ + G+ +EA+ L ++M++  
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+   YN  I     +   +    +L +M+     P+  TY+ L   L ++G    AF
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L   +L        +++N++I+  CK   L  A +L   M  RG +PDI TY  +I G 
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDA 533
           C+   I+ A Q+ E M +    P++V YNSI++GLCK + +D A  + +  +  G  LD 
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +T +TLI+G   + ++ +A  +  EM   G A + V Y ILI+  CK     ++      
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M+  G +P  +TY+ ++ +  K+    +   L   M+  GV+PD   Y ++I  L    S
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601

Query: 654 AED 656
            ++
Sbjct: 602 YDE 604



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 217/460 (47%), Gaps = 23/460 (5%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLL-DSYEICKATPAVFDALVRACTQIGATEGAYDV 168
            D+A++L  N M  NS SP  F   +L D Y                C Q    +GA  +
Sbjct: 287 MDEAVVLF-NQMLENSCSPDVFTYNILIDGY----------------CKQERPQDGA-KL 328

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +Q++   G   +   +N  +  LVK  +    + L + M+      +  TFNL+I   CK
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             +L+ A  L+  M   G  P++  +N++I+ AC+   ++ A +L  +M   +     P+
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM---TEAGCPPD 445

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            VT+N I++G CK  +V+ A E+   +   G   +V T +TLIDG  +    ++A +L  
Sbjct: 446 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 505

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM + G  P+ V Y   IH       ++ +L   S+M+DK   P   TYSI+   LC++ 
Sbjct: 506 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 565

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V+    L   +LE  +  DA  Y  +I+ LCKS++   A +L   M   G  P ++TY 
Sbjct: 566 RVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYN 625

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            L+D  CK   ++ A+ + E M+     P+ V YNS+ +G  K A  D A  L QA +  
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685

Query: 529 GLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           G       Y+ L+       K+ +A  ++ E    G  V+
Sbjct: 686 GCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 311/627 (49%), Gaps = 39/627 (6%)

Query: 57  SLTNSLVNRVVSEFRK-SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           +L+ ++V+ V+   R   P +A+ F+ ++     F HS+ S   + H+L    RF +   
Sbjct: 79  TLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDS 138

Query: 116 LMGNLMSANSVSPLEFL-EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           ++ NL+    +     + + LL+ +    +   V+D L  A ++      A  VI K+K 
Sbjct: 139 VIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKD 198

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
                S+  +N+ L H ++  +I   W +Y E+   G  ++  T +++I+ LC++ KLE+
Sbjct: 199 LNFQASVPTYNSLL-HNMRHTDI--MWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLED 255

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF-------------------- 274
           A+S  +   K  + P++V  N I+++ C+VG ++ A   F                    
Sbjct: 256 AISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLH 314

Query: 275 ---------RKMGV---MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                      +G    M    V P+ VT+N +  GF  LG +  A ++   M+  G++ 
Sbjct: 315 GLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNP 374

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ TY TLI G+ + G+ EEAL+L  E + RG   N + YN  +  L   G +E AL + 
Sbjct: 375 DLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLF 434

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M    + PD   YSIL  GLC+ G V++A++L+ Q+  +      ++   ++  L K+
Sbjct: 435 DEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKN 494

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N++ A+    +     L+ D++ Y  +IDGY +   I  A+Q+Y  M +    P++V +
Sbjct: 495 GNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTF 554

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++ING C+   L  A+ +L+  +  GL+ + +TY TL+N Y   G + E F    EM  
Sbjct: 555 NTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEA 614

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +    V Y +LI  LC+     ++ +L++ M   G++PD VTY T++  F K     +
Sbjct: 615 NAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITK 674

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
            ++L++ M+L    P   TY  +I+ L
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINAL 701



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 246/503 (48%), Gaps = 6/503 (1%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           G  D  E     P V  ++ L +    +G   GA  V+QK+ ++G +  +  +   +   
Sbjct: 327 GFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGH 386

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            ++  I    KL +E +S G+  NV  +N+++  LCK  ++EEAL+L+  M    + P+ 
Sbjct: 387 CQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDF 446

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + ++++I+  C+ G ++ A +L+ +M +       P+      ++ G  K G +  A   
Sbjct: 447 IVYSILIHGLCKEGFVQRAYQLYEQMRLKRK---FPHHFAQRAVLLGLFKNGNISEARNY 503

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
                +  +  +V  Y  +IDGY R     EA++L  +M++RG+ P+ V +N+ I+    
Sbjct: 504 FDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCR 563

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            GD+  A  +L  +  K + P   TY+ L    C  G +++ F   +++    +V    +
Sbjct: 564 RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVT 623

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y +LI  LC+ N +  + QLL  M  +GL+PD +TY T+I  +CKG  I  A+Q+Y  M 
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMML 683

Query: 492 KVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
                P  V Y  +IN LC    L D  + ++    R   L   TY T+I  +   G+++
Sbjct: 684 LHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVS 743

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A   F++M   G  ++   Y+ +IN LCK G   +A+    +M+  G+ PD     T++
Sbjct: 744 KALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVL 803

Query: 611 TRFSKNCSPEEVIELHDDMVLSG 633
             F +  +   V E    +V SG
Sbjct: 804 NAFHQQGNNSSVFEFLAMVVKSG 826


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 200/723 (27%), Positives = 323/723 (44%), Gaps = 119/723 (16%)

Query: 52  EQMAPSLTNSLVNRVVSEFRKS--PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
           +Q+ P L+    + V    R++  PK AL F+ +  ++  F  +L S C ++  L+    
Sbjct: 68  KQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGF 127

Query: 110 FDDALLLMGNLMSAN--------SVSPLEFLEGLLDSYEICKATPAV--FDALVRA-CTQ 158
              A LL+  L+               +E    + D  E+ ++  AV   D L+   CTQ
Sbjct: 128 VSPARLLLIRLIDRKLPVLFGDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQ 187

Query: 159 IG--ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
                   A  V + L  KG   ++      LS LVK NE+ + + +++ M   G   +V
Sbjct: 188 FRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDV 246

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
             F+  I A CK  K+E+A+ L++ M K G+ PNVV +N +I+  C+ G+L+ A +   K
Sbjct: 247 YLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEK 306

Query: 277 M-----------------GVM------SGDSVL---------PNSVTHNCIINGFCKLGR 304
           M                 G+M        +SVL         PN V +N +I+G+CK+G 
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN 366

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A  IR  M+  GI+ N  T  ++I G+ + G  E+A  + +EM+ RG   N   + +
Sbjct: 367 LGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTT 426

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            IHWL      E AL  L +M+ +++ P+    + L  GLC+ G    A +L  ++LE+ 
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              +  + N LI+ LCK+ N+  A +LL  M+ RG + D ITY TLI G CK G +E   
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-------------- 530
           ++   M K   +P+   YN +I+G+C+   LD A +L    +   L              
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606

Query: 531 ----------------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
                                 L+++ YNTLI  Y  NG   EAF +  +MR+ GI    
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV------------------------ 604
             Y+ LI+ +C  G  + A+ L+  M   G++P+ V                        
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726

Query: 605 -----------TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
                      TYT ++  +SK+   +   +L  +MV  G+ PD  TYN + +    E  
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786

Query: 654 AED 656
            E+
Sbjct: 787 IEE 789



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 256/503 (50%), Gaps = 4/503 (0%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           AT   +  L+    ++     A  V+++   KG + +   +N  +    K+  +G   ++
Sbjct: 314 ATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 373

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             +MVS G   N  T N +I   CK  ++E+A  +   ML  G   N   F  II+  C 
Sbjct: 374 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 433

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
               E AL+  R+M + +   + PN      ++ G CK G+   A E+ + +++ G   N
Sbjct: 434 NSRFESALRFLREMLLRN---MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGAN 490

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + T   LI G  + G+ +EA+RL  +M++RG + + + YN+ I     EG VE    +  
Sbjct: 491 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 550

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M+ + I PD FTY++L  G+CR G + +A  L N+     +V + Y+Y ++I+  CK++
Sbjct: 551 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 610

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +   ++L + ++ + L  + + Y TLI  YC+ GN   A +++++M+     P    Y+
Sbjct: 611 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 670

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           S+I+G+C    ++ AK L+   ++ GLL + + Y  LI GY   G++ +   +  EM + 
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 730

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            I  NK+ Y ++I+   K G  + A +L+  M+  GI+PD VTY  L   F K    EE 
Sbjct: 731 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 790

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
            ++ D M   G+  D  TY  ++
Sbjct: 791 FKICDYMSQEGLPLDEITYTTLV 813



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 225/430 (52%), Gaps = 4/430 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             +++++   +IG  E A  +++++  +G S++  A+   +  L   +      +  +EM
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +      N      ++  LCKE K  +A+ L++R+L+ G   N+V  N +I+  C+ G++
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A++L +KM  +    VL + +T+N +I+G CK G+VE   ++R  M+K GI+ +  TY
Sbjct: 508 QEAVRLLKKM--LERGFVL-DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTY 564

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G  R G  +EA+ L +E   R L+PN   Y   I        +E    + ++++ 
Sbjct: 565 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 624

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +++  +   Y+ L +  CRNG   +AFKLH+ +  + +     +Y+ LI+ +C    +  
Sbjct: 625 QNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMED 684

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L+  M   GL+P+++ Y  LI GYCK G ++  V V + M   +  PN + Y  +I+
Sbjct: 685 AKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMID 744

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G  K   +  A  LL      G++ D +TYN L NG+   GKI E F +   M   G+ +
Sbjct: 745 GYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPL 804

Query: 567 NKVGYNILIN 576
           +++ Y  L++
Sbjct: 805 DEITYTTLVH 814



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 215/426 (50%), Gaps = 20/426 (4%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           FS +  +   I+H L    RF+ AL  +  ++  N    +   +GLL +           
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN----MRPNDGLLTT----------- 461

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
             LV    + G    A ++  +L  KG   ++   N  +  L K   +    +L K+M+ 
Sbjct: 462 --LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 519

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G+V +  T+N +I   CKE K+EE   L   M+K GI P+   +N++I+  C++G L+ 
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+ L+ +        ++PN  T+  +I+G+CK  ++E  E++   ++   ++ N   Y T
Sbjct: 580 AVNLWNEC---KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 636

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI  Y R G++ EA +L D+M  +G+ P    Y+S IH +   G +E A  ++ +M  + 
Sbjct: 637 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 696

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + P+   Y+ L  G C+ G + +   +  ++    +  +  +Y ++I+   KS ++  A 
Sbjct: 697 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 756

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +LL  M+ +G++PD +TY  L +G+CK G IE   ++ + M +     + + Y ++++G 
Sbjct: 757 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816

Query: 510 CKDASL 515
            + ++L
Sbjct: 817 QQPSAL 822



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 2/282 (0%)

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A+ V   + +K + P   T + L   L +   +++++ +  + + + +  D Y ++  IN
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVF-ETMRQGVSPDVYLFSTAIN 254

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             CK   +  A QL   M   G+ P+++TY  LI G CK GN++ A +  E M K     
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
            L+ Y+ +INGL K    + A S+L+ +   G   + + YNTLI+GY   G + +A  + 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            +M + GI  N V  N +I   CK G  +QA  +++ M+  G   +   +TT++     N
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              E  +    +M+L  + P++     ++  L  E    D V
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 2/310 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           +  +G+ P        +  L    ++E + +V   M  + + PD + +S      C+ G 
Sbjct: 203 LANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGK 261

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V+ A +L   + +  +  +  +YN LI+ LCK  NL  A +    M+  G+   +ITY  
Sbjct: 262 VEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSV 321

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+G  K      A  V +   +    PN V+YN++I+G CK  +L  A  +       G
Sbjct: 322 LINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKG 381

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  +++T N++I G+   G++ +A  +  EM + G ++N   +  +I++LC    ++ A 
Sbjct: 382 INPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESAL 441

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             ++ M+L  + P+    TTLV    K     + +EL   ++  G   +  T NA+I  L
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501

Query: 649 LGEKSAEDQV 658
               + ++ V
Sbjct: 502 CKTGNMQEAV 511


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 261/515 (50%), Gaps = 17/515 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  + A ++  +R   +      A ++   L  KG    +  +   +  L K+ E     
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++  EM+  G+V +    + ++  L K+  +  A  L  ++ K G+ P++  +N +IN  
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ A  LF  MG      + PN VT++ +I+ FCK G+++ A      M + GI 
Sbjct: 366 CKDGKLDEAESLFNNMG---HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIK 422

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             V  Y++LI G+ + G    A  L DEM+  GL PN V+Y S I     EG++  A  +
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  K I P+ +T++ L  GLC    + +A KL  +++E +++ +  +YN+LI   CK
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCK 542

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK----- 496
             N   A +LL  M+ +GL+PD  TY  LI G C  G +  A +   +++  ++K     
Sbjct: 543 EGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE 602

Query: 497 ---PNLVIYNSIINGLCKDASLDAAKSLLQ---ASQRIGLLDAITYNTLINGYFINGKIA 550
              PN+V Y ++INGLCK   +D A+ L +   AS    L +  TY   ++     G I 
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASN--SLPNQNTYACFLDYLTSEGNIE 660

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A  +   +   G   N V YNILI   CK G  Q+A E++  MI  GI PD ++Y+T++
Sbjct: 661 KAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 719

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             + +    +E I+L + M+  GV+PD   YN +I
Sbjct: 720 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLI 754



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 267/518 (51%), Gaps = 11/518 (2%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L SY+  +A    +  LV    ++   E   +++ ++   G   S  A +N +  L K  
Sbjct: 275 LLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKG 334

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
            IG  + L  ++   G   ++  +N +I ++CK+ KL+EA SL+  M   G++PN V ++
Sbjct: 335 NIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYS 394

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           ++I+  C+ G L+ AL     +G M+   +      ++ +I+G CKLG++  A+ +   M
Sbjct: 395 ILIDSFCKRGKLDVALHF---LGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           I  G+  NV  Y +LI GY + G    A RL  EM  +G+ PN   + + I  L     +
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  +  +M++ ++ P+  TY++L +G C+ G   +AF+L ++++E+ +V D Y+Y  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 436 INYLCKSNNLAAAKQLLSSMI--------VRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           I+ LC +  ++ A++ ++ +         + G +P+++TY  LI+G CK G ++ A  + 
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLC 631

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFING 547
             M      PN   Y   ++ L  + +++ A  L        L + +TYN LI G+   G
Sbjct: 632 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 691

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +I EA  +   M + GI+ + + Y+ +I   C+ G  ++A +L + M+  G+ PD V Y 
Sbjct: 692 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 751

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            L+          +  EL DDM+  GV P+  TYN++I
Sbjct: 752 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 789



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 167/615 (27%), Positives = 286/615 (46%), Gaps = 14/615 (2%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDA 113
           ++ +L    V +V+ +     +LAL F+ ++G +  F HS  S C ++H LV    +  A
Sbjct: 53  ISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPA 112

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICK-ATPAVFDALVRACTQIGATEGAYDVIQKL 172
             L+   +    ++P    E  LDSY  C  +T   FD L++   Q         V++ +
Sbjct: 113 SSLL-QTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLM 171

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
              G    I   +  L+ L+++ +      L+ E+VS G   +V  +  V+ +LC+    
Sbjct: 172 MDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDF 231

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
             A  +  RM  SG   +V  +N+ I   C+   +  A+++     ++S   +  +  T+
Sbjct: 232 IRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI---KNLLSYKGLRADVGTY 288

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             ++ G CK+   E  EE+   MI+ G   +    + L+DG  + G+   A  L +++ K
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+  VYN+ I+ +  +G ++ A  + ++M  K + P+  TYSIL    C+ G +  
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A     ++ E  +    Y Y+ LI+  CK   L AAK L   MI  GL P+++ Y +LI 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GYCK G +  A ++Y  M      PN   + ++I+GLC    +  A  L        ++ 
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +TYN LI G+   G    AF +  EM   G+  +   Y  LI+ LC  G   +ARE M
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 592 --------KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
                   K+  + G +P+ VTYT L+    K    ++   L  +M+ S   P+  TY  
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648

Query: 644 IISPLLGEKSAEDQV 658
            +  L  E + E  +
Sbjct: 649 FLDYLTSEGNIEKAI 663



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 220/478 (46%), Gaps = 46/478 (9%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           + A    LV    + G    A+D++ K+K  G + S+  +N  ++ + K  ++     L+
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             M   G   N  T++++I + CK  KL+ AL    +M + GI   V  ++ +I+  C++
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G L  A  LF +M     + + PN V +  +I+G+CK G +  A  + + M   GI  N 
Sbjct: 439 GKLRAAKSLFDEM---IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T+  LI G        EA +L  EMV+  ++PN V YN  I     EG+   A  +L +
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM--------VGDAYSYNILI 436
           M++K + PD +TY  L  GLC  G V +A +  N +  E          + +  +Y  LI
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALI 615

Query: 437 NYLCKSNNLAAAKQL----------------------------------LSSMIVRGLIP 462
           N LCK   +  A+ L                                  L  +++ G + 
Sbjct: 616 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA 675

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +TY  LI G+CK G I+ A +V  NM      P+ + Y++II   C+   L  A  L 
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 735

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           ++    G+  D + YN LI G  + G++ +AF +  +M   G+  N+  YN LI+  C
Sbjct: 736 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 206/419 (49%), Gaps = 13/419 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+ +  + G  + A   + K+   G   +++ +++ +S   KL ++     L+ EM
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           ++ G   NV  +  +I   CKE +L  A  LY+ M   GI PN   F  +I+  C    +
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KLF   G M   +V+PN VT+N +I G CK G    A E+   M++ G+  +  TY
Sbjct: 512 AEANKLF---GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR--------GLMPNNVVYNSTIHWLFAEGDVEGAL 379
             LI G    G   EA    +++           G +PN V Y + I+ L   G ++ A 
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAE 628

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +  +M+  +  P+  TY+     L   G +++A +LH+ VL E  + +  +YNILI   
Sbjct: 629 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD-VLLEGFLANTVTYNILIRGF 687

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   +  A ++L +MI  G+ PD I+Y T+I  YC+ G+++ A++++E+M      P+ 
Sbjct: 688 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 747

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           V YN +I G C    L  A  L     R G+  +  TYN+LI+G  +   ++     FS
Sbjct: 748 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 199/384 (51%), Gaps = 12/384 (3%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KAT   + +L+    ++G    A  +  ++   G   ++  + + +S   K  E+   ++
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LY EM   G   N  TF  +I  LC   ++ EA  L+  M++  + PN V +N++I   C
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHC 541

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV----EFAEEIRYAMIK- 317
           + G+   A +L  +M V  G  ++P++ T+  +I+G C  GRV    EF  +++    K 
Sbjct: 542 KEGNTVRAFELLDEM-VEKG--LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 318 ---AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
               G   NV TY  LI+G  + G  ++A  LC EM+    +PN   Y   + +L +EG+
Sbjct: 599 NEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 658

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A+  L D++ +    +  TY+IL +G C+ G +++A ++   +++  +  D  SY+ 
Sbjct: 659 IEKAI-QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 717

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +I   C+  +L  A +L  SM+ RG+ PD + Y  LI G C  G +  A ++ ++M +  
Sbjct: 718 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 777

Query: 495 KKPNLVIYNSIINGLCKDASLDAA 518
            KPN   YNS+I+G C  +S+ + 
Sbjct: 778 VKPNRATYNSLIHGTCLMSSVSST 801



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 17/366 (4%)

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           +G L +A S+       GL       K    ++ +L+    + G    A+ +  ++  KG
Sbjct: 438 LGKLRAAKSLFDEMIANGL-------KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
            S + + +   +S L   N +    KL+ EMV    + N  T+N++I   CKE     A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF-------RKMGVMSGDSVLPNS 289
            L   M++ G+ P+   +  +I+  C  G +  A +         +K+  + G   LPN 
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG--CLPNV 608

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+  +ING CK+G ++ AE +   M+ +    N  TYA  +D     G+ E+A++L D 
Sbjct: 609 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDV 668

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           +++ G + N V YN  I      G ++ A  VL +MID  I PD  +YS +    CR G 
Sbjct: 669 LLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGD 727

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +K+A KL   +L   +  D  +YN LI   C +  L  A +L   M+ RG+ P+  TY +
Sbjct: 728 LKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNS 787

Query: 470 LIDGYC 475
           LI G C
Sbjct: 788 LIHGTC 793


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 259/505 (51%), Gaps = 4/505 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           +PAV D LV    + G  + A +V+  ++ +G + SI   N  L  L++ + +   WK+ 
Sbjct: 46  SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR 105

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           + MV  G   +V T++ +I A CK  + + A  +   M + G   N V +N++I   C+ 
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G +E A   F+K   M    ++P+  T+  +ING CK  R   A+ +   M  A +  NV
Sbjct: 166 GAVEEAFG-FKK--DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 222

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             YA LIDG+ R G+++EA ++  EMV  G+ PN + Y++ +  L   G ++ A  +L  
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+     PD  TY+++ +G  R+   K AF+L +++    +  + Y+Y+I+I+ LC+S  
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
              A  LL  M  +GL P+   Y  LI GYC+ GN+  A ++++ M KV   P+L  YNS
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 402

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I GL K   ++ +       Q  GLL +  TY+ LI+GY  NG +  A  +   M + G
Sbjct: 403 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 462

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  N V Y  L+    K    ++     K M+  G++ D   Y  L+   S + + E   
Sbjct: 463 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 522

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            +  ++  +G  PD   Y+++IS L
Sbjct: 523 RVLSEIEKNGSVPDVHVYSSLISGL 547



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 281/571 (49%), Gaps = 48/571 (8%)

Query: 116 LMGNLMSANSVSPL----EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           L+ +L+ A++++ L    EF+ G   S ++       +  L+ A  ++   + A  V+ +
Sbjct: 88  LLKDLLRADAMALLWKVREFMVGAGISPDV-----YTYSTLIEAYCKVREFDTAKKVLVE 142

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           ++ +G  ++   +N  ++ L +   +   +   K+M   G V +  T+  +I  LCK  +
Sbjct: 143 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 202

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             EA +L   M  + + PNVV +  +I+   + G+ + A K+ ++M V +G  V PN +T
Sbjct: 203 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM-VAAG--VQPNKIT 259

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ ++ G CK+G+++ A  +   M++     +  TY  +I+G+ R  + ++A RL  EM 
Sbjct: 260 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEME 319

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G+ PN   Y+  IH L   G+ E A  +L +M  K + P+ F Y+ L  G CR G V 
Sbjct: 320 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS 379

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A ++ +++ + +++ D Y YN LI  L K   +  + +  + M  RGL+P+  TY  LI
Sbjct: 380 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 439

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIY----------------------------- 502
            GY K G++E A Q+ + M     KPN VIY                             
Sbjct: 440 HGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM 499

Query: 503 ------NSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAM 555
                   +I+ L    +++AA  +L   ++ G + D   Y++LI+G        +AF +
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGI 559

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             EM   G+  N V YN LI+ LCK G    AR +   ++  G++P+ VTYT+L+    K
Sbjct: 560 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 619

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
                    L+++M+ +G++PD   Y+ + +
Sbjct: 620 VGDISNAFYLYNEMLATGITPDAFVYSVLTT 650



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 259/527 (49%), Gaps = 40/527 (7%)

Query: 133 EGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           + LLD     +  P   V+  L+    + G  + A+ +I+++   G   +   ++N +  
Sbjct: 207 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 266

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K+ ++ R   L K+MV   +  +  T+NL+I    +    ++A  L   M  +GI PN
Sbjct: 267 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN 326

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  ++++I+  CQ G+ E A  L  +M   +   + PN+  +  +I+G+C+ G V  A E
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEEM---TTKGLKPNAFVYAPLISGYCREGNVSLACE 383

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           I   M K  +  ++  Y +LI G ++ G  EE+ +   +M +RGL+PN   Y+  IH   
Sbjct: 384 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             GD+E A  ++  M+D  + P+   Y  L +   ++  +++       +L++ ++ D  
Sbjct: 444 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 503

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            Y ILI+ L  S N+ AA ++LS +   G +PD+  Y +LI G CK  + E A  + + M
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
            K    PN+V YN++I+GLCK   +  A+++  +    GL+ + +TY +LI+G    G I
Sbjct: 564 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 623

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNIL----------------------------------I 575
           + AF +++EM   GI  +   Y++L                                  +
Sbjct: 624 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV 683

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           +  CK G  Q+  +L+ V++  G++P+ +T   +++  S+     EV
Sbjct: 684 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEV 730



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 226/451 (50%), Gaps = 4/451 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           + N +   ++       +K+ KEMV+ G   N  T++ ++  LCK  +++ A  L  +M+
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           +    P+ + +N+II    +  + + A   FR +  M    + PN  T++ +I+G C+ G
Sbjct: 285 RDSHRPDTITYNLIIEGHFRHHNKKDA---FRLLSEMENAGISPNVYTYSIMIHGLCQSG 341

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             E A ++   M   G+  N   YA LI GY R G+   A  + D+M K  ++P+   YN
Sbjct: 342 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 401

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L   G VE +    + M ++ + P+ FTYS L  G  +NG ++ A +L  ++L+ 
Sbjct: 402 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT 461

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +   Y  L+    KS+++        SM+ +G++ D   YG LI      GN+E A
Sbjct: 462 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 521

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
            +V   ++K    P++ +Y+S+I+GLCK A  + A  +L    + G+  + + YN LI+G
Sbjct: 522 FRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 581

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +G I+ A  +F+ +   G+  N V Y  LI+  CK G    A  L   M+  GI PD
Sbjct: 582 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 641

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
              Y+ L T  S     E+ + L ++M L G
Sbjct: 642 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 219/528 (41%), Gaps = 71/528 (13%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    V+  L+    + G    A ++  K+        ++ +N+ +  L K+  +    K
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            + +M   G + N  T++ +I+   K   LE A  L  RML +G+ PN V +  ++    
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478

Query: 263 QVGDLEFALKLFRKM---GVMSGDSV-----------------------------LPNSV 290
           +  D+E     F+ M   GVM  + +                             +P+  
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            ++ +I+G CK    E A  I   M K G+D N+  Y  LIDG  + G    A  + + +
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           + +GL+PN V Y S I      GD+  A ++ ++M+   I PD F YS+LT G    G +
Sbjct: 599 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 658

Query: 411 KQA-FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +QA F +    L  H      S+N L++  CK   +    +LL  ++ RGL+P+ +T   
Sbjct: 659 EQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 716

Query: 470 LIDGYCKGGNIEGAVQVYENMKKV------------------EKKPNLVIYNSIINGLCK 511
           +I G  + G +     ++  +++                   + K  L + + +I   CK
Sbjct: 717 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 776

Query: 512 DASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           + +LD A  L      +   +   +Y  +++     GK++EA  +  EM   G       
Sbjct: 777 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG------- 829

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
            N+    +   G +   R        H I+   V  T + TRF K+ S
Sbjct: 830 -NLQPTLVALLGIFWFRRH-------HHILNKSV--TKMATRFGKDSS 867



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 1/188 (0%)

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+D Y K G ++ A +V   M+     P++   N+++  L +  ++     + +     G
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D  TY+TLI  Y    +   A  +  EMR  G  +N V YN+LI  LC+ G  ++A 
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              K M  +G++PD  TY  L+    K+    E   L D+M  + + P+   Y  +I   
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 649 LGEKSAED 656
           + E +A++
Sbjct: 233 MREGNADE 240



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/288 (20%), Positives = 109/288 (37%), Gaps = 53/288 (18%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           G+LD        P +  ++AL+    + G    A +V   +  KG   +   + + +   
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617

Query: 192 VKLNEIGRFWKLYKEMVSCGYVEN----------------------------------VN 217
            K+ +I   + LY EM++ G   +                                  ++
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 677

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +FN ++   CK  K++E L L + ++  G+ PN +    II+   + G L     +F ++
Sbjct: 678 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 737

Query: 278 GVMSGDSV----------------LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              + +S                 +P  V  + +I   CK G ++ A  +R  ++     
Sbjct: 738 QQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALMLRDVIVAKSAP 796

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
               +Y  ++D   R G   EAL L  EM KRG +   +V    I W 
Sbjct: 797 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWF 844


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 165/537 (30%), Positives = 279/537 (51%), Gaps = 7/537 (1%)

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           NL  +NS +   F+E L+ +Y+   + P VFD   +   + G    A     KL   G +
Sbjct: 14  NLDISNSFT--HFVERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVA 71

Query: 179 VSIHAWNNFLSHLV-KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           +S  + N +L+ L  K + +G   K++ E    G   N  ++N+++ +L +  K+ EA  
Sbjct: 72  LSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHH 131

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L  RM   G  P+VV +  II+  C VG+L+  ++L ++M +     + PN  T++ II 
Sbjct: 132 LLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQL---KGLKPNLYTYSSIIL 188

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             CK G+V   E++   M+K G+  +   Y TLIDG+ + G+++ A +L  EM  R ++P
Sbjct: 189 LLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP 248

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           +++ +++ I  L   G V  A  + ++MI K   PD  TY+ L  G C+ G +K+AF LH
Sbjct: 249 DSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLH 308

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           NQ+++  +  +  +Y  L + LCKS  L  A +LL  M  +GL  +I TY T+++G CK 
Sbjct: 309 NQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKA 368

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TY 536
           GNI  AV++ E MK+    P+ + Y ++++   K   +  A+ LL+     GL   + T+
Sbjct: 369 GNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTF 428

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N L+NG  ++GK+ +   +   M   GI  N   YN ++   C     + + E+ + M  
Sbjct: 429 NVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCA 488

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
            G++PD  TY  L+    K  + +E   LH +MV    +    +YNA+I      K 
Sbjct: 489 QGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKK 545



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 268/543 (49%), Gaps = 19/543 (3%)

Query: 103 LLVNWRRFDDALLLMGNLMSANSV--------SPLEFLEGLLDSYE------ICKATPAV 148
           LL   R+F D LL  G  +SA S         S  + L  +L  +       +C  T + 
Sbjct: 54  LLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTES- 112

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ L+ +  ++G    A+ ++ +++ KG    + ++   +     + E+ +  +L KEM 
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   N+ T++ +I  LCK  K+ E   +   M+K G++P+ V +  +I+  C++G+ +
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A KLF +   M    ++P+S+  + +I G    G+V  A+++   MIK G + +  TY 
Sbjct: 233 AAYKLFSE---MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYT 289

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LIDGY + G  ++A  L ++MV+ GL PN V Y +    L   G+++ A  +L +M  K
Sbjct: 290 ALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK 349

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            +  +  TY+ +  GLC+ G + QA KL  ++ E  +  D  +Y  L++   K+  +  A
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++LL  M+ RGL P ++T+  L++G C  G +E   ++ + M +    PN   YNSI+  
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQ 469

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C   ++  +  + +     G++ D+ TYN LI G+     + EA+ +  EM      + 
Sbjct: 470 YCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              YN LI    K     +AR+L + M   G++     Y   V    +  + E  +EL D
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCD 589

Query: 628 DMV 630
           + +
Sbjct: 590 EAI 592



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 172/339 (50%), Gaps = 1/339 (0%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  N  +Y  L++   R G   EA  L   M  +G +P+ V Y + I      G+++  
Sbjct: 105 GVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKV 164

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
           + ++ +M  K + P+ +TYS +   LC++G V +  K+  ++++  +  D   Y  LI+ 
Sbjct: 165 VQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDG 224

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            CK  N  AA +L S M  R ++PD I +  LI G    G +  A +++  M K   +P+
Sbjct: 225 FCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPD 284

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
            V Y ++I+G CK   +  A  L     +IGL  + +TY  L +G   +G++  A  +  
Sbjct: 285 EVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLH 344

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   G+ +N   YN ++N LCK G   QA +LM+ M   G+ PD +TYTTL+  + K  
Sbjct: 345 EMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTG 404

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              +  EL  +M+  G+ P   T+N +++ L      ED
Sbjct: 405 EMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLED 443



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 194/385 (50%), Gaps = 3/385 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+    ++G T+ AY +  +++ +       A++  +  L    ++    KL+ EM
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G+  +  T+  +I   CK  ++++A  L+ +M++ G+ PNVV +  + +  C+ G+L
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A +L  +M       +  N  T+N I+NG CK G +  A ++   M +AG+  +  TY
Sbjct: 337 DTANELLHEM---CRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL+D Y + G   +A  L  EM+ RGL P  V +N  ++ L   G +E    +L  M++
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I P+  TY+ + K  C    ++ + +++  +  + +V D+ +YNILI   CK+ N+  
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   M+ +       +Y  LI G+ K   +  A Q++E M++     +  IYN  ++
Sbjct: 514 AWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVD 573

Query: 508 GLCKDASLDAAKSLLQASQRIGLLD 532
              ++ +++    L   +    LLD
Sbjct: 574 MNYEEGNMETTLELCDEAIEKCLLD 598



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 5/291 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP V  + AL     + G  + A +++ ++  KG  ++I  +N  ++ L K   I +  K
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L +EM   G   +  T+  ++ A  K  ++ +A  L   ML  G+ P VV FN+++N  C
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G LE   +L +    M    ++PN+ T+N I+  +C    +  + EI   M   G+  
Sbjct: 437 MSGKLEDGERLLK---WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVP 493

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY  LI G+ +  + +EA  L  EMV++        YN+ I   F    +  A  + 
Sbjct: 494 DSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLF 553

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +M  + +      Y++        G ++   +L ++ +E+ ++  A + N
Sbjct: 554 EEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLLDKARNGN 604


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 176/591 (29%), Positives = 289/591 (48%), Gaps = 24/591 (4%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
           ++   ALE +  V      + + +   AI+H+L   + +  A  LM +L+     S    
Sbjct: 48  RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSR 107

Query: 132 L----EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           +      +L   E  K TP VF  L+ A +++G  E A  V  K+ V     ++ A N  
Sbjct: 108 ICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMV 164

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L  LVK       WK+Y +MV+ G   NV T+  +I   C++    +A  L+  M++  I
Sbjct: 165 LDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI 224

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
           +P VV + ++I   C    +  A  +FR    M    +LPN  T+N +++G+CK+  V+ 
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFR---TMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A E+   M+  G+  NV T+  LIDG  +      A +   +M   G++PN  VYN  I 
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G++  AL + S++    I PD FTYSIL KGLC    +++A  L  ++ ++  + 
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +A +YN LI+  CK  N+  A ++ S M  +G+ P+IIT+ TLIDGYCK G +E A+ +Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
             M      P++V Y ++I+G  KD +   A  L +  Q  GL  +  T + LI+G   +
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 547 GKIAEAFAMF-------------SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           G+I++A  +F             +E+     + N V Y  LI  LC  G   +A +    
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           M   G+ PD  T   ++    +     +V+ L  D++  G+ P++  Y  +
Sbjct: 582 MRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 230/419 (54%), Gaps = 9/419 (2%)

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           R+  S   PNV  F ++I    ++G +E AL ++ KM       VLP     N +++G  
Sbjct: 118 RLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM------DVLPAMQACNMVLDGLV 169

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K GR +   ++   M+  G   NV TY TLIDG  R G   +A RL DEM+++ + P  V
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +Y   I  L  E  +  A  +   M +  + P+ +TY+ +  G C+   VK+A +L+ ++
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           L + ++ +  ++ ILI+ LCK++ + +A++ L  M   G++P+I  Y  LIDGYCK GN+
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
             A+ ++  ++K E  P++  Y+ +I GLC    ++ A  LLQ  ++ G L +A+TYNTL
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GY   G + +A  + S+M   GI  N + ++ LI+  CK G  + A  L   M++ G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +PD V YT L+    K+ + +E   LH +M  +G+ P+  T + +I  L  +    D +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 239/508 (47%), Gaps = 35/508 (6%)

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM----SANSVSPLEFLEGLLDS 138
           WV        ++++   ++  LV   RFD    + G+++    S N V+    ++G    
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 139 YEICKA--------------TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
            +  KA              T  ++  L+R          A  + + ++  G   +++ +
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +    K+  + +  +LY EM+  G + NV TF ++I  LCK  ++  A      M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G+ PN+  +N +I+  C+ G+L  AL L  +   +    +LP+  T++ +I G C + R
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE---IEKHEILPDVFTYSILIKGLCGVDR 383

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +E A+ +   M K G   N  TY TLIDGY + G+ E+A+ +C +M ++G+ PN + +++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I      G +E A+ + ++M+ K + PD   Y+ L  G  ++G  K+AF+LH ++ E  
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLL------------SSMIVRGLI-PDIITYGTLI 471
           +  + ++ + LI+ LCK   ++ A +L             ++ + R L  P+ + Y  LI
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G C  G I  A + + +M+    +P++     II G  +   L     L     ++G++
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSE 558
            ++  Y  L  GY  +G +  A +   E
Sbjct: 624 PNSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 114/498 (22%), Positives = 201/498 (40%), Gaps = 83/498 (16%)

Query: 126 VSPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           V  +E  +GLL   +     P    ++ L+    + G  E A +V  ++  KG   +I  
Sbjct: 381 VDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIIT 440

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           ++  +    K  ++     LY EMV  G + +V  +  +I    K+   +EA  L+  M 
Sbjct: 441 FSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ 500

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLF-RKMGVMSGDSVL---------PNSVTHN 293
           ++G+ PNV   + +I+  C+ G +  A+KLF  K G  +  S           PN V + 
Sbjct: 501 EAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYT 560

Query: 294 CIINGFCKLGRV----EFAEEIRYA-------------------------------MIKA 318
            +I G C  GR+    +F  ++R +                               ++K 
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS-TIHWLFAEGDVEG 377
           GI  N   Y  L  GY   G  + AL  C E V+     N+  + S TI           
Sbjct: 621 GIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIR---------- 670

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH---MVGDAYSYNI 434
           + F L  + +K  C  H +Y  LT           AF +H+ VL  +   ++     + I
Sbjct: 671 SRFQLCVVTEKKEC--HSSY--LT-----------AFGIHSFVLLWYFHTILKPPSPHEI 715

Query: 435 L--INYLCKSNNLAAAK--QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           L  + ++ +  +    K  QL   M +    PDI+T    +      G ++    ++  +
Sbjct: 716 LKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYI 775

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
           +      +L + NS+IN   K   +  A+ L   +Q+    D  T+ ++I G+ ++G+  
Sbjct: 776 RHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQK---KDVTTWTSMIVGHALHGQAE 832

Query: 551 EAFAMFSEMRNVGIAVNK 568
           EA  +F+EM+       K
Sbjct: 833 EALQLFTEMKETNKRARK 850



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 122/286 (42%), Gaps = 42/286 (14%)

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA--LKLFRKMGVMSGDSVLPNSVT 291
           +AL L+ +M      P++V   + ++    +G L+    +  + +   +  D  L NS  
Sbjct: 732 KALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNS-- 789

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              +IN + K G +  A  +     K     +V T+ ++I G+A  G +EEAL+L  EM 
Sbjct: 790 ---LINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMK 842

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +          N         G+ E +L          + P+  T+  +       G V+
Sbjct: 843 ETNKRARKNKRN---------GEXESSL----------VLPNDVTFMGVLMACSHAGLVE 883

Query: 412 QAFKLHNQVLEEHMVGDAYS-YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           +  +    + E++ +    S +  +++ LC++  L  A + +  M VR   P+ + + TL
Sbjct: 884 EGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTL 940

Query: 471 IDGYC-----KGGNIEGAVQVYENMKK--VEKKPNLVIYNSIINGL 509
           + G C       GN    +++    ++  +E +P+ V  N I++ L
Sbjct: 941 L-GACSLQGDSNGNGNSNIKIXSEARRQLLELEPSHVGDNVIMSNL 985


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 165/533 (30%), Positives = 265/533 (49%), Gaps = 9/533 (1%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATP----AVFDALVRACTQIGATEGAYDVIQKLK 173
           G  +S NS + +   + L   Y + +  P    A F   + +  +         +  ++ 
Sbjct: 57  GGFVSNNSTN-ISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMD 115

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           + G + ++++ N  ++ L +LN +     +  +M   G     +TFN +I  LC E K++
Sbjct: 116 LFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIK 175

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA+ L+  M++ G  PNV+ +N IIN  C+ G+   A+ +F+KM     +   P+ VT+N
Sbjct: 176 EAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM---EQNGCKPDVVTYN 232

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            II+  CK   V  A E    M+  GI  NV TY  ++ G+   G   EA RL  EMV R
Sbjct: 233 TIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR 292

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
            +MP+ V     +  L  EG V  A  V   M +K + P+  TY+ L  G C    + +A
Sbjct: 293 DVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEA 352

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            K+   ++ +      +SYNILIN  CKS  +  AK LL+ M  + L PD +TY TL+ G
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
            C+ G  + A+ +++ M      PNLV Y+ +++G CK   LD A  LL++ Q   L   
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPN 472

Query: 534 ITYNT-LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           I ++T LI G FI GK+  A  +FS++   GI      Y ++I  L K G   +A +L +
Sbjct: 473 IVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFR 532

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            M   G +P+  +Y  ++  F +N      I L D+MV    S +  T+  ++
Sbjct: 533 KMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 234/480 (48%), Gaps = 4/480 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +  FL    K  +      L  +M   G   NV + N++I  LC+   ++ A+S+ 
Sbjct: 87  SVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSIL 146

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M K GI P    FN +IN  C  G ++ A++LF +M V  G    PN +++N IING 
Sbjct: 147 GKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEM-VRRGHE--PNVISYNTIINGL 203

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G    A ++   M + G   +V TY T+ID   +     +A+    EM+ RG+ PN 
Sbjct: 204 CKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNV 263

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YN  +H     G +  A  +  +M+ + + PD  T +IL  GLC+ G V +A  +   
Sbjct: 264 FTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFET 323

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+ +  +  +YN L++  C    +  AK++   MI +G  P + +Y  LI+G+CK   
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRR 383

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A  +   M      P+ V Y++++ GLC+      A ++ +     GLL + +TY+ 
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G+  +G + EA  +   M+   +  N V + ILI  +   G  + A+EL   +   G
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADG 503

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           I P   TYT ++    K    +E  +L   M   G  P++ +YN +I   L  + +   +
Sbjct: 504 IRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 563



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 159/337 (47%), Gaps = 1/337 (0%)

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
           Y M++     +V  +   +  +A+       + LC++M   G+  N    N  I+ L   
Sbjct: 77  YRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRL 136

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             V+ A+ +L  M    I P   T++ L  GLC  G +K+A +L N+++      +  SY
Sbjct: 137 NHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISY 196

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N +IN LCK+ N + A  +   M   G  PD++TY T+ID  CK   +  A++    M  
Sbjct: 197 NTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLD 256

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
               PN+  YN +++G C    L+ A  L  +   R  + D +T   L++G    G ++E
Sbjct: 257 RGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSE 316

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +F  M   G+  N   YN L++  C      +A+++ ++MI  G  P   +Y  L+ 
Sbjct: 317 ARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILIN 376

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            F K+   +E   L  +M    ++PD  TY+ ++  L
Sbjct: 377 GFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 413



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 178/371 (47%), Gaps = 3/371 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     ++ ++ +  +      A + + ++  +G   ++  +N  +     L ++    
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEAT 283

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+KEMV    + +  T  +++  LCKE  + EA  ++  M + G+ PN+  +N +++  
Sbjct: 284 RLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    +  A K+F    +M      P   ++N +INGFCK  R++ A+ +   M    ++
Sbjct: 344 CLQRLMNEAKKVFE---IMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN 400

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY+TL+ G  + G  +EAL +  EM   GL+PN V Y+  +      G ++ AL +
Sbjct: 401 PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL 460

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M +K + P+   ++IL +G+   G ++ A +L +++  + +     +Y ++I  L K
Sbjct: 461 LKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A  L   M   G +P+  +Y  +I G+ +  +   A+++ + M       NL  
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLST 580

Query: 502 YNSIINGLCKD 512
           +  +++   +D
Sbjct: 581 FQMLLDLESQD 591



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 1/179 (0%)

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYN 537
           +I+ A+  +  M ++  +P++  +   +    K        SL       G+   + + N
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LIN       +  A ++  +M  +GI      +N LIN LC  G  ++A EL   M+  
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           G  P+ ++Y T++    K  +    +++   M  +G  PD  TYN II  L  ++   D
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 267/512 (52%), Gaps = 4/512 (0%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P VFD L+R  TQ      A++  + L      V   A N  L+ L +        + Y+
Sbjct: 87  PQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYR 146

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            ++S     N  T N+++++ CK  + + A ++   M K  ++P+VV  N++I+   + G
Sbjct: 147 LVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAG 206

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D++ A+ L   +  M+   + P  VT+N ++ G CK  R + A+E+   M +  +  +VR
Sbjct: 207 DVDAAIAL---VDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           ++  LI G+ R G  +EA++   EM  R + P+ V ++  I      G+++ A   L +M
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD   Y+++  G CR G + +A ++ ++++    + D  +YN L+N LCK + L
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRL 383

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A++LL+ M  RG+ PD+ T+ TLI GYC+ GN E A+Q+++ + +   +P++V YNS+
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSL 443

Query: 506 INGLCKDASLDAAKSLLQASQ-RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+G+C+   L  A  L      R  L + ITY+ LI+ +   G++ +AF    EM   G 
Sbjct: 444 IDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGN 503

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N   YN +I   C+ G  ++ ++ ++ M    + PD +T+ TL+  + K  +      
Sbjct: 504 LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFN 563

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + + M    V PD  TYN II+    + + +D
Sbjct: 564 VFNIMEKEMVRPDAVTYNMIINGFSEQGNMQD 595



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 252/478 (52%), Gaps = 4/478 (0%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           +GA  VI +++ +     +   N  +    +  ++     L   M + G    + T+N V
Sbjct: 174 DGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSV 233

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +  LCK  + ++A  ++  M +  + P+V  FN++I   C+VG+++ A+K +++M     
Sbjct: 234 LKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEM---QH 290

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             V P+ V+ +C+I  F + G ++ A      M   G+  +   Y  +I G+ R GS  E
Sbjct: 291 RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE 350

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           ALR+ DEMV  G +P+ V YN+ ++ L  +  +  A  +L++M ++ + PD  T++ L  
Sbjct: 351 ALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIH 410

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G CR G  + A +L + +L + +  D  +YN LI+ +C+  +LA A +L   M  R ++P
Sbjct: 411 GYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILP 470

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + ITY  LID +C+ G +E A    + M K    PN+  YNSII G C+  ++   +  L
Sbjct: 471 NHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFL 530

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           Q  ++  +  D IT+NTLI+GY     +  AF +F+ M    +  + V YN++IN   + 
Sbjct: 531 QKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQ 590

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           G  Q A  + K M   GI PD  TY +L+       + ++  +LHD+M+  G +PD++
Sbjct: 591 GNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 179/604 (29%), Positives = 300/604 (49%), Gaps = 34/604 (5%)

Query: 46  RKWKILE-QMAP----SLTNSLVNRVVSEFRKSPKLALEFYTWVGEN-NRFSHSLESSCA 99
           R W  +E  ++P    S T  +V RVV+   K  KLAL F+ W   +   FSH+  S  +
Sbjct: 24  RPWSAIEPDLSPFSGASTTPRIVGRVVNSL-KDAKLALAFFRWAPASIPGFSHTAFSWNS 82

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++ +LV  ++  +A    G+L          F   LL S   C+     ++ ++      
Sbjct: 83  LLQVLVRCKKHREA----GDL----------FRSELLAS---CEPDVCSYNIVISGFCNA 125

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A ++++++K  G +         ++ +    ++       + M   G   NV T+
Sbjct: 126 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 182

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I A  +  KLEEA+ L   M + G  PN+V +N++++  C++  +  A  + +KM  
Sbjct: 183 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM-- 240

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           + G    PN +T N +++GFCK G V+ A ++   M+  G+  NV TY+ LIDG  +   
Sbjct: 241 IEG-GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  + +EM  RG+ P+   Y++ IH L     +E A  +L  M      PD   YS 
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +    C++G + +A K   ++ ++    D  +YN +I+ LCK   +A A+ +L  M   G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 460 -LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            ++PD++TY T+I+G CK   +  A ++ + M K    P++V Y +II+GLCK   L+ A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + LLQ  +R G   + +TY TLI+G     K+ EA  +  EMRN G   N V YN ++N 
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539

Query: 578 LCKFGCYQQARELMKVMI--LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           LC  G  ++A++L++ M        PD  TY T+V     +   +E  +L + M  +  S
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTTSS 599

Query: 636 PDNQ 639
              Q
Sbjct: 600 QQEQ 603



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 244/481 (50%), Gaps = 16/481 (3%)

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           + G S +  +WN+ L  LV+  +      L++  +      +V ++N+VI   C    L 
Sbjct: 70  IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLH 129

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            AL L   M  +G  P+      II      GDL+ A+   R MG        PN VT+ 
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD------PNVVTYT 183

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I  F +  ++E A ++   M + G   N+ TY  L+D   +      A  +  +M++ 
Sbjct: 184 ALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 243

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G  PN + +NS +      G+V+ A  +L  M+ K + P+  TYS L  GLC++    Q 
Sbjct: 244 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS----QK 299

Query: 414 FKLHNQVLEEH----MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           F    +VLEE     +  DA++Y+ LI+ LCK++ +  A+Q+L  M   G  PD++ Y +
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           +I  +CK G +  A +  + M+K  K P++V YN++I+GLCK   +  A+ +L+  Q  G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 530 --LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
             L D +TY+T+ING   +  + EA  +   M   G   + V Y  +I+ LCK G  ++A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             L++ M   G  P+ VTYTTL++   K    +E   + ++M  +G  P+  TYN +++ 
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539

Query: 648 L 648
           L
Sbjct: 540 L 540



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/448 (33%), Positives = 229/448 (51%), Gaps = 8/448 (1%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G+     ++N ++  L +  K  EA  L+   L +   P+V  +N++I+  C  GDL  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+L  +M         P++ TH  II      G ++ A +   +M   G D NV TY  L
Sbjct: 132 LELLEEM---KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTAL 185

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I  +AR    EEA++L +EM +RG  PN V YN  +  L     V  A  V+  MI+   
Sbjct: 186 IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  T++ L  G C+ G V  A KL   ++ + M  +  +Y+ LI+ LCKS     AK+
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 305

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L  M  RG+ PD  TY  LI G CK   IE A Q+   M      P++V+Y+SII+  C
Sbjct: 306 VLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 365

Query: 511 KDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG-IAVNK 568
           K   L +A K+L +  ++    D +TYNT+I+G    GKIAEA  +  +M+  G +  + 
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V Y+ +IN LCK     +A++L+  M   G  PD VTYTT++    K    EE   L   
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAED 656
           M  +G +P+  TY  +IS L   +  ++
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDE 513



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 50/103 (48%)

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           + K+A AF  ++     G +     +N L+  L +   +++A +L +  +L    PD  +
Sbjct: 55  DAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCS 114

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           Y  +++ F         +EL ++M  +G +PD  T+  II+ +
Sbjct: 115 YNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAM 157


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 267/496 (53%), Gaps = 12/496 (2%)

Query: 51  LEQMAPSLT-NSLVNRV-VSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           L+++ PSLT N L++ + ++    SP   L F+ W+   + F  S+ S C + H L   +
Sbjct: 58  LKRILPSLTPNHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHK 117

Query: 109 RFDDALLLMGNLMS---ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGA 165
              +A  L+  ++S    NS S +     +L++    ++   VF  L+ A T  G    A
Sbjct: 118 MLSEAQSLLQFVVSRKGKNSASSV--FTSVLEARGTHQSN-LVFSVLMNAYTDSGYFSDA 174

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
               + ++     +  H+       L+KLN     W  Y+E++ CGY  +V  FN++++ 
Sbjct: 175 IQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHR 234

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LCKE K+ EA  L+  + K G+ P VV FN +IN  C+ G+L+   +L R    M  + V
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKR---FMMENRV 291

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            P+  T++ +ING CK G+++ A ++   M   G+  N  T+ TLI+G+   G ++  + 
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGME 351

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           +  +M+++G+ P+ + YN+ I+ L   GD+  A  ++ +M  + + PD FTY++L  G C
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCC 411

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G ++ A ++  ++++E +  D  ++  LI+  C+   +  A++ L  M+  G+ PD  
Sbjct: 412 KEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDA 471

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY  +I G+CK G+++   ++ + M+     P +V YN ++NGLCK   +  A  LL A 
Sbjct: 472 TYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531

Query: 526 QRIGLL-DAITYNTLI 540
             +G++ D ITYN L+
Sbjct: 532 LNLGVVPDDITYNILL 547



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 205/419 (48%), Gaps = 9/419 (2%)

Query: 235 ALSLYYRMLKS-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           A S++  +L++ G   + + F++++N     G    A++ FR   V   +  +P    H+
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRL--VRKHNLQIP---FHS 192

Query: 294 C--IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           C  + +   KL     A      ++  G   +V  +  L+    +     EA  L  E+ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KRGL P  V +N+ I+     G+++    +   M++  + PD FTYS+L  GLC+ G + 
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLD 312

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A KL  ++ +  +V +  ++  LIN  C +       ++   M+ +G+ PD+ITY TLI
Sbjct: 313 DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLI 372

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           +G CK G++  A ++   M +   KP+   Y  +I+G CK+  L++A  + +   + G+ 
Sbjct: 373 NGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIE 432

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           LD + +  LI+G+   G++ EA     EM   GI  +   Y ++I+  CK G  +   +L
Sbjct: 433 LDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKL 492

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +K M   G +P  VTY  L+    K    +    L D M+  GV PD+ TYN ++   L
Sbjct: 493 LKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTL 551



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 26/207 (12%)

Query: 60  NSLVNRV--VSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLM 117
           N+L+N +  V + R++ KL +E      + ++F++++                 D     
Sbjct: 369 NTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM---------------LIDGCCKE 413

Query: 118 GNLMSANSVSPLEFLEGL-LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           G+L SA  +      EG+ LD+          F AL+    + G    A   ++++   G
Sbjct: 414 GDLESALEIRKEMVKEGIELDN--------VAFTALISGFCREGQVIEAERTLREMLEAG 465

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
                  +   +    K  ++   +KL KEM   G+V  V T+N+++  LCK+ +++ A 
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQ 263
            L   ML  G+ P+ + +N+++    Q
Sbjct: 526 MLLDAMLNLGVVPDDITYNILLERTLQ 552



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 27/240 (11%)

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           + H     +SY  + ++LC    L+ A+ LL  ++ R                 KG N  
Sbjct: 96  QHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSR-----------------KGKNSA 138

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLIN 541
            +V       +   + NLV ++ ++N          A    +  ++  L   I +++   
Sbjct: 139 SSVFTSVLEARGTHQSNLV-FSVLMNAYTDSGYFSDAIQCFRLVRKHNL--QIPFHSC-- 193

Query: 542 GYFINGKI-----AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           GY  +  +     + A+A + E+ + G   +   +N+L++ LCK     +A+ L   +  
Sbjct: 194 GYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK 253

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G+ P  V++ TL+  + K+ + ++   L   M+ + V PD  TY+ +I+ L  E   +D
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/467 (33%), Positives = 241/467 (51%), Gaps = 4/467 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++++ N  ++ L +LN +     +  +M   G   +  TFN +I  LC E K++EA+ L+
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELF 186

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M+K G  PNV+ +  +IN  C+ G+   A+ +F+KM     +   PN VT++ II+  
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM---EQNGCKPNVVTYSTIIDSL 243

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK   V  A E    M++ GI  NV TY +++ G+   G   EA RL  EMV R +MPN 
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V +   +  L  EG V  A  V   M +K + PD  TY+ L  G C    + +A K+   
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +     A+SYNILIN  CKS  +  AK LL+ M  + L PD +TY TL+ G C+ G 
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNT 538
            + A+ +++ M      PNLV Y  +++G CK   LD A  LL++ +   L   I  Y  
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI G FI GK+  A  +FS++   G   +   Y ++I  L K G   +A +L + M   G
Sbjct: 484 LIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 543

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            +P+  +Y  ++  F +N      I L D+MV    S +  T+  ++
Sbjct: 544 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 234/480 (48%), Gaps = 4/480 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +  FL    K  +      L  +M       NV + N++I  LC+   ++ ++S+ 
Sbjct: 92  SVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVL 151

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M K GI P+ + FN +IN  C  G ++ A++LF +M V  G    PN +++  +ING 
Sbjct: 152 GKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEM-VKRGHE--PNVISYTTVINGL 208

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G    A ++   M + G   NV TY+T+ID   +     +A+    EMV+RG+ PN 
Sbjct: 209 CKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV 268

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS +H     G +  A  +  +M+ + + P+  T++IL  GLC+ G V +A  +   
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+ +  D  +YN L++  C    +  AK++   MI +G  P   +Y  LI+GYCK   
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A  +   M      P+ V Y++++ GLC+      A +L +     G   + +TY  
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G+  +G + EA  +   M+   +  N V Y ILI  +   G  + A+EL   +   G
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG 508

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             PD  TYT ++    K    +E  +L   M   G  P++ +YN +I   L  + +   +
Sbjct: 509 TRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 568



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 238/454 (52%), Gaps = 4/454 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  MV      +V  F   + +  K+ +    +SL  +M    +  NV   N++IN  C+
Sbjct: 81  FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +  ++F++ +  KM  +    + P+++T N +ING C  G+++ A E+   M+K G + N
Sbjct: 141 LNHVDFSVSVLGKMFKL---GIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPN 197

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y T+I+G  + G++  A+ +  +M + G  PN V Y++ I  L  +  V  A+  LS
Sbjct: 198 VISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLS 257

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M+++ I P+ FTY+ +  G C  G + +A +L  +++   ++ +  ++ IL++ LCK  
Sbjct: 258 EMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEG 317

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            ++ A+ +  +M  +G+ PDI TY  L+DGYC    +  A +V+E M +    P    YN
Sbjct: 318 MVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYN 377

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +ING CK   +D AKSLL       L  D +TY+TL+ G    G+  EA  +F EM + 
Sbjct: 378 ILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSY 437

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   N V Y IL++  CK G   +A +L+K M    + P+ V YT L+         E  
Sbjct: 438 GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVA 497

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            EL   +   G  PD +TY  +I  LL E  +++
Sbjct: 498 KELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDE 531



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 221/431 (51%), Gaps = 4/431 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+AL+      G  + A ++  ++  +GH  ++ ++   ++ L K         ++K+M
Sbjct: 165 TFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV T++ +I +LCK+  + +A+     M++ GI PNV  +N I++  C +G L
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +LF++   M G  V+PN+VT   +++G CK G V  A  +   M + G++ ++ TY
Sbjct: 285 NEATRLFKE---MVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTY 341

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+DGY       EA ++ + M+++G  P    YN  I+       ++ A  +L++M  
Sbjct: 342 NALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + PD  TYS L +GLC+ G  K+A  L  ++       +  +Y IL++  CK  +L  
Sbjct: 402 KALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDE 461

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL SM  + L P+I+ Y  LI+G    G +E A +++  +     +P++  Y  +I 
Sbjct: 462 ALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIK 521

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL K+   D A  L +  +  G L ++ +YN +I G+  N   + A  +  EM     +V
Sbjct: 522 GLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSV 581

Query: 567 NKVGYNILINF 577
           N   + +L++ 
Sbjct: 582 NLSTFQMLLDL 592



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 207/406 (50%), Gaps = 7/406 (1%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           KL +   +++ +A  N L +  K+ E     +L+ EMV  G+  NV ++  VI  LCK  
Sbjct: 156 KLGIHPDAITFNALINGLCNEGKIKEA---VELFNEMVKRGHEPNVISYTTVINGLCKTG 212

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
               A+ ++ +M ++G  PNVV ++ II+  C+   +  A++   +M V  G  + PN  
Sbjct: 213 NTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM-VERG--IPPNVF 269

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N I++GFC LG++  A  +   M+   +  N  T+  L+DG  + G   EA  + + M
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            ++G+ P+   YN+ +     +  +  A  V   MI K   P   +Y+IL  G C++  +
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  L  ++  + +  D  +Y+ L+  LC+      A  L   M   G  P+++TY  L
Sbjct: 390 DEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVIL 449

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +DG+CK G+++ A+++ ++MK+ + +PN+V Y  +I G+     L+ AK L       G 
Sbjct: 450 LDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGT 509

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
             D  TY  +I G    G   EA+ +F +M + G   N   YN++I
Sbjct: 510 RPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMI 555



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 177/371 (47%), Gaps = 3/371 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  ++ +  +      A + + ++  +G   ++  +N+ +     L ++    
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+KEMV    + N  TF +++  LCKE  + EA  ++  M + G+ P++  +N +++  
Sbjct: 289 RLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGY 348

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    +  A K+F    +M      P + ++N +ING+CK  R++ A+ +   M    ++
Sbjct: 349 CLQRLMNEAKKVFE---IMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALN 405

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY+TL+ G  + G  +EAL L  EM   G  PN V Y   +      G ++ AL +
Sbjct: 406 PDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKL 465

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M +K + P+   Y+IL +G+   G ++ A +L +++  +    D  +Y ++I  L K
Sbjct: 466 LKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLK 525

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A  L   M   G +P+  +Y  +I G+ +  +   A+++ + M       NL  
Sbjct: 526 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLST 585

Query: 502 YNSIINGLCKD 512
           +  +++   +D
Sbjct: 586 FQMLLDLESQD 596



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 1/246 (0%)

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           N CV  A     +++  +       +   +    K    +    L + M +  +  ++ +
Sbjct: 71  NVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYS 130

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QAS 525
              LI+  C+  +++ +V V   M K+   P+ + +N++INGLC +  +  A  L  +  
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV 190

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +R    + I+Y T+ING    G  + A  +F +M   G   N V Y+ +I+ LCK     
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A E +  M+  GI P+  TY ++V  F       E   L  +MV   V P+  T+  ++
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 646 SPLLGE 651
             L  E
Sbjct: 311 DGLCKE 316



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 1/178 (0%)

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNT 538
           ++ A+  +  M ++  +P++V +   +    K        SL        +   + + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LIN       +  + ++  +M  +GI  + + +N LIN LC  G  ++A EL   M+  G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             P+ ++YTT++    K  +    +++   M  +G  P+  TY+ II  L  ++   D
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVND 251


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 176/591 (29%), Positives = 289/591 (48%), Gaps = 24/591 (4%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
           ++   ALE +  V      + + +   AI+H+L   + +  A  LM +L+     S    
Sbjct: 48  RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSR 107

Query: 132 L----EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           +      +L   E  K TP VF  L+ A +++G  E A  V  K+ V     ++ A N  
Sbjct: 108 ICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV---LPAMQACNMV 164

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L  LVK       WK+Y +MV+ G   NV T+  +I   C++    +A  L+  M++  I
Sbjct: 165 LDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKI 224

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
           +P VV + ++I   C    +  A  +FR    M    +LPN  T+N +++G+CK+  V+ 
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFR---TMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A E+   M+  G+  NV T+  LIDG  +      A +   +M   G++PN  VYN  I 
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G++  AL + S++    I PD FTYSIL KGLC    +++A  L  ++ ++  + 
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +A +YN LI+  CK  N+  A ++ S M  +G+ P+IIT+ TLIDGYCK G +E A+ +Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
             M      P++V Y ++I+G  KD +   A  L +  Q  GL  +  T + LI+G   +
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 547 GKIAEAFAMF-------------SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           G+I++A  +F             +E+     + N V Y  LI  LC  G   +A +    
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           M   G+ PD  T   ++    +     +V+ L  D++  G+ P++  Y  +
Sbjct: 582 MRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 230/419 (54%), Gaps = 9/419 (2%)

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           R+  S   PNV  F ++I    ++G +E AL ++ KM       VLP     N +++G  
Sbjct: 118 RLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM------DVLPAMQACNMVLDGLV 169

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K GR +   ++   M+  G   NV TY TLIDG  R G   +A RL DEM+++ + P  V
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +Y   I  L  E  +  A  +   M +  + P+ +TY+ +  G C+   VK+A +L+ ++
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           L + ++ +  ++ ILI+ LCK++ + +A++ L  M   G++P+I  Y  LIDGYCK GN+
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
             A+ ++  ++K E  P++  Y+ +I GLC    ++ A  LLQ  ++ G L +A+TYNTL
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GY   G + +A  + S+M   GI  N + ++ LI+  CK G  + A  L   M++ G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +PD V YT L+    K+ + +E   LH +M  +G+ P+  T + +I  L  +    D +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 243/515 (47%), Gaps = 35/515 (6%)

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM----SANSVSPLEFLEGLLDS 138
           WV        ++++   ++  LV   RFD    + G+++    S N V+    ++G    
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQ 206

Query: 139 YEICKA--------------TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
            +  KA              T  ++  L+R          A  + + ++  G   +++ +
Sbjct: 207 GDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTY 266

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +    K+  + +  +LY+EM+  G + NV TF ++I  LCK  ++  A      M  
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G+ PN+  +N +I+  C+ G+L  AL L  +   +    +LP+  T++ +I G C + R
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE---IEKHEILPDVFTYSILIKGLCGVDR 383

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +E A+ +   M K G   N  TY TLIDGY + G+ E+A+ +C +M ++G+ PN + +++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I      G +E A+ + ++M+ K + PD   Y+ L  G  ++G  K+AF+LH ++ E  
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLL------------SSMIVRGLI-PDIITYGTLI 471
           +  + ++ + LI+ LCK   ++ A +L             ++ + R L  P+ + Y  LI
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALI 563

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G C  G I  A + + +M+    +P++     II G  +   L     L     ++G++
Sbjct: 564 QGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGII 623

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            ++  Y  L  GY  +G +  A     ++  +GI 
Sbjct: 624 PNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/558 (30%), Positives = 274/558 (49%), Gaps = 34/558 (6%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           L++G+  + N    L+   G+ D    E C      +  L+      G  + A D+++++
Sbjct: 281 LILGHCRNRN----LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
             KG   +++ +   ++ L  +       +L   M   G   NV T+  +I  L +  KL
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 396

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           E A+ LY++MLK G+ PN V +N +INE C  G    ALK+F     M G   L N+ T+
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH---WMEGHGSLANTQTY 453

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N II G C  G +E A  +   M+K G    V TY TLI+GY   G+   A RL D M +
Sbjct: 454 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 513

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+   YN  +      G +E A F   +M++  + P+  +Y+ L  G  ++G V  
Sbjct: 514 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDI 573

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  L  ++ E     +  SYN +IN L K N  + A+++   M  +GL+P++ITY TLID
Sbjct: 574 ALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLID 633

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G C+ G  + A +++ +M+K +  PNL  Y+S+I GLC++   D A+ LL+  +R GL  
Sbjct: 634 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 693

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK----------- 580
           D +T+ +LI+G+ + G+I  AF +   M +VG   N   Y++L+  L K           
Sbjct: 694 DEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAV 753

Query: 581 -------FGCYQQ------ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
                  F  +++         L+  M   G  P   TY+TLV+   +     E  +L  
Sbjct: 754 QHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 813

Query: 628 DMVLSGVSPDNQTYNAII 645
           DM   G  PD + Y +++
Sbjct: 814 DMKERGFCPDREIYYSLL 831



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 174/644 (27%), Positives = 307/644 (47%), Gaps = 45/644 (6%)

Query: 21  HVGKQFANPSTEDIVFRAI----CVNLRQRKWK---ILEQMAPSLTNSLVNRVVSEFRKS 73
           H+   FA P++ +  F+AI    C  L + +WK    L+Q++P L    V  +V+   K 
Sbjct: 72  HISSHFAVPASRE-PFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVA-VHKD 129

Query: 74  PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE 133
            +  ++F+ W+ +   + H++    ++++ LV  R F                +P + + 
Sbjct: 130 TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVF----------------APADHIR 173

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            L+                ++AC          D + ++   G   S+++ N  L  L K
Sbjct: 174 ILM----------------IKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAK 217

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
              +     LYK+M++ G   ++ TFN +I  L K+ K+ EA  +  ++ +  + P+V  
Sbjct: 218 FEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFT 277

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +I   C+  +L+ A  +F +M     D   PNSVT++ +ING C  GRV+ A ++  
Sbjct: 278 YTSLILGHCRNRNLDLAFGVFDRMVKEGCD---PNSVTYSTLINGLCNEGRVDEALDMLE 334

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            MI+ GI+  V TY   I         EEA+ L   M KRG  PN   Y + I  L   G
Sbjct: 335 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 394

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +E A+ +   M+ + + P+  TY+ L   LC  G    A K+ + +     + +  +YN
Sbjct: 395 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 454

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +I  LC   ++  A  L   M+  G +P ++TY TLI+GY   GN+  A ++ + MK+ 
Sbjct: 455 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 514

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
             +P+   YN +++G  K   L++A    Q     GL  + ++Y TLI+G+  +GK+  A
Sbjct: 515 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIA 574

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            ++   M  +G   N   YN +IN L K   + +A ++   M   G++P+ +TYTTL+  
Sbjct: 575 LSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDG 634

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +N   +   ++  DM      P+  TY+++I  L  E  A++
Sbjct: 635 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 191/431 (44%), Gaps = 33/431 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++ LV   ++ G  E A    Q++   G + +  ++   +    K  ++    
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L + M   G   NV ++N VI  L KE +  EA  +  +M + G+ PNV+ +  +I+  
Sbjct: 576 SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGL 635

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G  +FA K+F  M        LPN  T++ +I G C+ G+ + AE +   M + G+ 
Sbjct: 636 CRNGRTQFAFKIFHDM---EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 692

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL------------ 369
            +  T+ +LIDG+   G  + A  L   MV  G  PN   Y+  +  L            
Sbjct: 693 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVA 752

Query: 370 --------FA--EGDVEGALF--VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
                   F+  E DV   +   +L+ M +    P   TYS L  GLCR G   +A +L 
Sbjct: 753 VQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 812

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             + E     D   Y  L+   CK+  +  A ++  S+  +G    +  Y  LI   CK 
Sbjct: 813 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 872

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYN 537
           G +E A  +++NM + E   + +++  +++GL K+  LD    LL       ++++  + 
Sbjct: 873 GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLH------IMESKNFT 926

Query: 538 TLINGYFINGK 548
             I  Y I G+
Sbjct: 927 PNIQTYVILGR 937



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 126/291 (43%), Gaps = 27/291 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      + +L+    Q G  + A  ++++++ KG +     + + +   V L  I   +
Sbjct: 656 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 715

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKL-EEALSLYY-------------------- 240
            L + MV  G   N  T+++++  L KEC L EE +++ +                    
Sbjct: 716 LLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSN 775

Query: 241 ---RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
              RM + G  P +  ++ +++  C+ G    A +L + M         P+   +  ++ 
Sbjct: 776 LLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM---KERGFCPDREIYYSLLI 832

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             CK   V+ A +I +++   G   ++  Y  LI    + G  EEA  L D M+++    
Sbjct: 833 AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNA 892

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           + +V+   +  L  EG+++  + +L  M  K+  P+  TY IL + L R G
Sbjct: 893 DEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 291/567 (51%), Gaps = 33/567 (5%)

Query: 109 RFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA--- 161
           R D     +GN++      ++++    L+GL       K T    D ++R  TQ+G    
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCAD----KRTSDAMDIVLRRMTQLGCIPN 161

Query: 162 ----------------TEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKL 203
                           ++ A +++Q +   G      + ++   ++   K  ++ + +  
Sbjct: 162 VFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y EM+  G + NV T++ +I ALCK   +++A+ +   M+K+G+ PN   +N I++  C 
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G  + A+   +KM     D V P+ VT+N +++  CK GR   A ++  +M K G+   
Sbjct: 282 SGQPKEAIGFLKKM---HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY TL+ GYA  G+  E   L D MV+ G+ PN+ V++  I     +G V+ A+ V S
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  + + PD  TY  +   LC++G V+ A +   Q+++E +      YN LI+ LC  +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               AK+L+  M+ RG+  D I + ++ID +CK G +  + ++++ M ++  KP+++ Y+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G C    +D A  LL +   +G+  D +TYNTLINGY    ++ +A  +F EM + 
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G++ + + YNI++  L +      A+EL   +   G   +  TY  ++    KN   +E 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +  ++ L+ +  + +T+N +I  LL
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 202/425 (47%), Gaps = 15/425 (3%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE-----FALKLFRKMGVMSGDSVLP 287
           E+A  ++  +L+ G   ++   N      C + D+       A+  + +M     D V P
Sbjct: 36  EDARHVFDELLRRGRGASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTP 89

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+  +I   C  GR++        +IK G   +   +  L+ G      + +A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 348 -DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HICPDHFTYSILTKGL 404
              M + G +PN   YN  +  L  E   + AL +L  M D      PD  +Y+ +  G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G + +A+  ++++L+  ++ +  +Y+ +I  LCK+  +  A ++L+SM+  G++P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY +++ GYC  G  + A+   + M     +P++V YNS+++ LCK+     A+ +  +
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             + GL   I TY TL+ GY   G + E   +   M   GI  N   ++ILI    K G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             QA  +   M   G+ PD VTY T++    K+   E+ +   + M+   +SP N  YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 644 IISPL 648
           +I  L
Sbjct: 450 LIHSL 454



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 133/581 (22%), Positives = 229/581 (39%), Gaps = 103/581 (17%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F   +LL G      S   LE L+ + D    C      +  ++    + G  + AY   
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            ++  +G   ++  +++ ++ L K   + +  ++   MV  G + N  T+N +++  C  
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM------------ 277
            + +EA+    +M   G+ P+VV +N +++  C+ G    A K+F  M            
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 278 --------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
                                +M  + + PN    + +I  + K G+V+ A  +   M +
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G++ +  TY T+I    + G  E+A+R  ++M+   L P N+VYNS IH L      + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 378 ALFVLSDMIDKHIC-----------------------------------PDHFTYSILTK 402
           A  ++ +M+D+ IC                                   PD  TYS L  
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C  G + +A KL   ++   M  D  +YN LIN  CK + +  A  L   M   G+ P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 463 DIITY--------------------------GT---------LIDGYCKGGNIEGAVQVY 487
           DIITY                          GT         ++ G CK    + A++++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           +N+   + +     +N +I  L K    D AK L  A    GL+ D  TY+ +       
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + E   +F  M   G   N    N ++  L + G   +A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+ A  + G  + A  V  K++ +G +     +   +  L K   +    + +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +          +N +I++LC   K ++A  L   ML  GI  + + FN II+  C+ G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V P+ +T++ +I+G+C  G+++ A ++  +M+  G+  +  TY
Sbjct: 496 IESEKLF---DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY +    E+AL L  EM   G+ P+ + YN  +  LF       A  +   + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K      
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +++   GL+PD+ TY  + +   + G +E    ++ +M++     N  + NSI+ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/380 (21%), Positives = 165/380 (43%), Gaps = 34/380 (8%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA-----TPAVFDALV 153
           +++H L  + ++D A  L+  ++         F   ++DS+  CK      +  +FD +V
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH--CKEGRVIESEKLFDLMV 506

Query: 154 RACTQ---------------IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           R   +                G  + A  ++  +   G       +N  ++   K++ + 
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L++EM S G   ++ T+N+++  L +  +   A  LY  + +SG    +  +N+I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +  C+    + AL++F+ + +     +   + T N +I    K+GR + A+++  A+   
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD---LQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  +VRTY+ + +     G  EE   L   M + G   N+ + NS +  L   GD+  A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCR------NGCVKQA-FKL--HNQVLEEHMVGDA 429
              L  + +KH   +  T S+    L        + C++   F L  +++V E H++   
Sbjct: 744 GTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHSCIRGGIFSLCVNSEVQENHLLDSE 803

Query: 430 YSYNILINYLCKSNNLAAAK 449
              + L+  L    NL  +K
Sbjct: 804 SGVHFLLKLLNPPVNLVDSK 823


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 177/612 (28%), Positives = 293/612 (47%), Gaps = 42/612 (6%)

Query: 75  KLALEFYTWVGENNRF--SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           KLAL+F  WV +       H ++  C   H+LV  R +D A  ++  L   +  S   F 
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF- 109

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             L+ +Y +C + P+V+D L+R   + G  + + ++ + + + G + S++  N  L  +V
Sbjct: 110 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  E    W   KEM+      +V TFN++I  LC E   E++  L  +M KSG  P +V
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N +++  C+ G  + A++L   M     D+   +  T+N +I+  C+  R+     + 
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA---DVCTYNMLIHDLCRSNRIAKGYLLL 286

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M K  I  N  TY TLI+G++  G    A +L +EM+  GL PN+V +N+ I    +E
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G+ + AL +   M  K + P   +Y +L  GLC+N     A   + ++    +     +Y
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             +I+ LCK+  L  A  LL+ M   G+ PDI+TY  LI+G+CK G  + A ++   + +
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNT------------- 538
           V   PN +IY+++I   C+   L  A  + +A    G   D  T+N              
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 539 ----------------------LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
                                 LINGY  +G+  +AF++F EM  VG       Y  L+ 
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK G  ++A + +K +       D V Y TL+T   K+ +  + + L  +MV   + P
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646

Query: 637 DNQTYNAIISPL 648
           D+ TY ++IS L
Sbjct: 647 DSYTYTSLISGL 658



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 230/532 (43%), Gaps = 39/532 (7%)

Query: 115  LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
            +L+ +L  A  V+  E     + S  I   T + FD L+      G    A+ V  ++  
Sbjct: 513  VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS-FDCLINGYGNSGEGLKAFSVFDEMTK 571

Query: 175  KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
             GH  +   + + L  L K   +    K  K + +     +   +N ++ A+CK   L +
Sbjct: 572  VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 631

Query: 235  ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            A+SL+  M++  I P+   +  +I+  C+ G    A+ LF K     G+ VLPN V + C
Sbjct: 632  AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGN-VLPNKVMYTC 689

Query: 295  IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
             ++G  K G+ +     R  M   G   ++ T   +IDGY+R G  E+   L  EM  + 
Sbjct: 690  FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 355  LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
              PN   YN  +H      DV  +  +   +I   I PD  T   L  G+C +  ++   
Sbjct: 750  GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 415  KLHNQVLEEHMVGDAYSYNILINYLC---------------------------------- 440
            K+    +   +  D Y++N+LI+  C                                  
Sbjct: 810  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 441  -KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
             +++    ++ +L  M  +G+ P+   Y  LI+G C+ G+I+ A  V E M   +  P  
Sbjct: 870  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 500  VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
            V  ++++  L K    D A  LL+   ++ L+  I ++ TL++    NG + EA  +   
Sbjct: 930  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989

Query: 559  MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            M N G+ ++ V YN+LI  LC  G    A EL + M   G + +  TY  L+
Sbjct: 990  MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 164/349 (46%), Gaps = 4/349 (1%)

Query: 176  GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
            GH+  I   N  +    ++ +I +   L  EM +     N+ T+N++++   K   +  +
Sbjct: 714  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 236  LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
              LY  ++ +GI P+ +  + ++   C+   LE  LK+ +   +  G  V  +  T N +
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF-ICRGVEV--DRYTFNML 830

Query: 296  INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
            I+  C  G + +A ++   M   GI  +  T   ++    R    +E+  +  EM K+G+
Sbjct: 831  ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 890

Query: 356  MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             P +  Y   I+ L   GD++ A  V  +MI   ICP +   S + + L + G   +A  
Sbjct: 891  SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 950

Query: 416  LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
            L   +L+  +V    S+  L++  CK+ N+  A +L   M   GL  D+++Y  LI G C
Sbjct: 951  LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1010

Query: 476  KGGNIEGAVQVYENMKKVEKKPNLVIYNSIING-LCKDASLDAAKSLLQ 523
              G++  A ++YE MK      N   Y ++I G L ++ +   A  +L+
Sbjct: 1011 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+ILI    +   +  + ++   M + G  P + T   ++    K G     V V+  +K
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE---DVSVWSFLK 182

Query: 492 KVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
           ++ K+   P++  +N +IN LC + S + +  L+Q  ++ G    I TYNT+++ Y   G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +   A  +   M++ G+  +   YN+LI+ LC+     +   L++ M    I P+ VTY 
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           TL+  FS         +L ++M+  G+SP++ T+NA+I   + E
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346



 Score = 38.9 bits (89), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 40/85 (47%)

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y+ILI    + G  Q + E+ ++M L+G  P   T   ++    K+     V     +M+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
              + PD  T+N +I+ L  E S E
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFE 210


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 291/567 (51%), Gaps = 33/567 (5%)

Query: 109 RFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA--- 161
           R D     +GN++      ++++    L+GL       K T    D ++R  TQ+G    
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCAD----KRTSDAMDIVLRRMTQLGCIPN 161

Query: 162 ----------------TEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKL 203
                           ++ A +++Q +   G      + ++   ++   K  ++ + +  
Sbjct: 162 VFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y EM+  G + NV T++ +I ALCK   +++A+ +   M+K+G+ PN   +N I++  C 
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G  + A+   +KM     D V P+ VT+N +++  CK GR   A ++  +M K G+   
Sbjct: 282 SGQPKEAIGFLKKM---HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY TL+ GYA  G+  E   L D MV+ G+ PN+ V++  I     +G V+ A+ V S
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  + + PD  TY  +   LC++G V+ A +   Q+++E +      YN LI+ LC  +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               AK+L+  M+ RG+  D I + ++ID +CK G +  + ++++ M ++  KP+++ Y+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G C    +D A  LL +   +G+  D +TYNTLINGY    ++ +A  +F EM + 
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G++ + + YNI++  L +      A+EL   +   G   +  TY  ++    KN   +E 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +  ++ L+ +  + +T+N +I  LL
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 202/425 (47%), Gaps = 15/425 (3%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE-----FALKLFRKMGVMSGDSVLP 287
           E+A  ++  +L+ G   ++   N      C + D+       A+  + +M     D V P
Sbjct: 36  EDARHVFDELLRRGRGASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTP 89

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+  +I   C  GR++        +IK G   +   +  L+ G      + +A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 348 -DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HICPDHFTYSILTKGL 404
              M + G +PN   YN  +  L  E   + AL +L  M D      PD  +Y+ +  G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G + +A+  ++++L+  ++ +  +Y+ +I  LCK+  +  A ++L+SM+  G++P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY +++ GYC  G  + A+   + M     +P++V YNS+++ LCK+     A+ +  +
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             + GL   I TY TL+ GY   G + E   +   M   GI  N   ++ILI    K G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             QA  +   M   G+ PD VTY T++    K+   E+ +   + M+   +SP N  YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 644 IISPL 648
           +I  L
Sbjct: 450 LIHSL 454



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/581 (22%), Positives = 229/581 (39%), Gaps = 103/581 (17%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F   +LL G      S   LE L+ + D    C      +  ++    + G  + AY   
Sbjct: 163 FSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            ++  +G   ++  +++ ++ L K   + +  ++   MV  G + N  T+N +++  C  
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM------------ 277
            + +EA+    +M   G+ P+VV +N +++  C+ G    A K+F  M            
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 278 --------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
                                +M  + + PN    + +I  + K G+V+ A  +   M +
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G++ +  TY T+I    + G  E+A+R  ++M+   L P N+VYNS IH L      + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 378 ALFVLSDMIDKHIC-----------------------------------PDHFTYSILTK 402
           A  ++ +M+D+ IC                                   PD  TYS L  
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C  G + +A KL   ++   M  D  +YN LIN  CK + +  A  L   M   G+ P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 463 DIITY--------------------------GT---------LIDGYCKGGNIEGAVQVY 487
           DIITY                          GT         ++ G CK    + A++++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           +N+   + +     +N +I  L K    D AK L  A    GL+ D  TY+ +       
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + E   +F  M   G   N    N ++  L + G   +A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+ A  + G  + A  V  K++ +G +     +   +  L K   +    + +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +          +N +I++LC   K ++A  L   ML  GI  + + FN II+  C+ G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V P+ +T++ +I+G+C  G+++ A ++  +M+  G+  +  TY
Sbjct: 496 IESEKLF---DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY +    E+AL L  EM   G+ P+ + YN  +  LF       A  +   + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K      
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +++   GL+PD+ TY  + +   + G +E    ++ +M++     N  + NSI+ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 142/322 (44%), Gaps = 25/322 (7%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA-----TPAVFDALV 153
           +++H L  + ++D A  L+  ++         F   ++DS+  CK      +  +FD +V
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH--CKEGRVIESEKLFDLMV 506

Query: 154 RACTQ---------------IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           R   +                G  + A  ++  +   G       +N  ++   K++ + 
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L++EM S G   ++ T+N+++  L +  +   A  LY  + +SG    +  +N+I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +  C+    + AL++F+ + +     +   + T N +I    K+GR + A+++  A+   
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD---LQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  +VRTY+ + +     G  EE   L   M + G   N+ + NS +  L   GD+  A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743

Query: 379 LFVLSDMIDKHICPDHFTYSIL 400
              L  + +KH   +  T S+ 
Sbjct: 744 GTYLFMIDEKHFSLEASTASLF 765


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 291/567 (51%), Gaps = 33/567 (5%)

Query: 109 RFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA--- 161
           R D     +GN++      ++++    L+GL       K T    D ++R  TQ+G    
Sbjct: 106 RLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCAD----KRTSDAMDIVLRRMTQLGCIPN 161

Query: 162 ----------------TEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKL 203
                           ++ A +++Q +   G      + ++   ++   K  ++ + +  
Sbjct: 162 VFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y EM+  G + NV T++ +I ALCK   +++A+ +   M+K+G+ PN   +N I++  C 
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G  + A+   +KM     D V P+ VT+N +++  CK GR   A ++  +M K G+   
Sbjct: 282 SGQPKEAIGFLKKM---HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY TL+ GYA  G+  E   L D MV+ G+ PN+ V++  I     +G V+ A+ V S
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  + + PD  TY  +   LC++G V+ A +   Q+++E +      YN LI+ LC  +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               AK+L+  M+ RG+  D I + ++ID +CK G +  + ++++ M ++  KP+++ Y+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G C    +D A  LL +   +G+  D +TYNTLINGY    ++ +A  +F EM + 
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G++ + + YNI++  L +      A+EL   +   G   +  TY  ++    KN   +E 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +  ++ L+ +  + +T+N +I  LL
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 202/425 (47%), Gaps = 15/425 (3%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE-----FALKLFRKMGVMSGDSVLP 287
           E+A  ++  +L+ G   ++   N      C + D+       A+  + +M     D V P
Sbjct: 36  EDARHVFDELLRRGRGASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTP 89

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+  +I   C  GR++        +IK G   +   +  L+ G      + +A+ + 
Sbjct: 90  NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149

Query: 348 -DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HICPDHFTYSILTKGL 404
              M + G +PN   YN  +  L  E   + AL +L  M D      PD  +Y+ +  G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G + +A+  ++++L+  ++ +  +Y+ +I  LCK+  +  A ++L+SM+  G++P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY +++ GYC  G  + A+   + M     +P++V YNS+++ LCK+     A+ +  +
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             + GL   I TY TL+ GY   G + E   +   M   GI  N   ++ILI    K G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             QA  +   M   G+ PD VTY T++    K+   E+ +   + M+   +SP N  YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 644 IISPL 648
           +I  L
Sbjct: 450 LIHSL 454



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 132/577 (22%), Positives = 228/577 (39%), Gaps = 103/577 (17%)

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
           +LL G      S   LE L+ + D    C      +  ++    + G  + AY    ++ 
Sbjct: 167 ILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            +G   ++  +++ ++ L K   + +  ++   MV  G + N  T+N +++  C   + +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---------------- 277
           EA+    +M   G+ P+VV +N +++  C+ G    A K+F  M                
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 278 ----------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
                            +M  + + PN    + +I  + K G+V+ A  +   M + G++
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY T+I    + G  E+A+R  ++M+   L P N+VYNS IH L      + A  +
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 382 LSDMIDKHIC-----------------------------------PDHFTYSILTKGLCR 406
           + +M+D+ IC                                   PD  TYS L  G C 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G + +A KL   ++   M  D  +YN LIN  CK + +  A  L   M   G+ PDIIT
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 467 Y--------------------------GT---------LIDGYCKGGNIEGAVQVYENMK 491
           Y                          GT         ++ G CK    + A+++++N+ 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
             + +     +N +I  L K    D AK L  A    GL+ D  TY+ +       G + 
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           E   +F  M   G   N    N ++  L + G   +A
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+ A  + G  + A  V  K++ +G +     +   +  L K   +    + +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +          +N +I++LC   K ++A  L   ML  GI  + + FN II+  C+ G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V P+ +T++ +I+G+C  G+++ A ++  +M+  G+  +  TY
Sbjct: 496 IESEKLF---DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY +    E+AL L  EM   G+ P+ + YN  +  LF       A  +   + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K      
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +++   GL+PD+ TY  + +   + G +E    ++ +M++     N  + NSI+ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 168/380 (44%), Gaps = 34/380 (8%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA-----TPAVFDALV 153
           +++H L  + ++D A  L+  ++         F   ++DS+  CK      +  +FD +V
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH--CKEGRVIESEKLFDLMV 506

Query: 154 RACTQ---------------IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           R   +                G  + A  ++  +   G       +N  ++   K++ + 
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L++EM S G   ++ T+N+++  L +  +   A  LY  + +SG    +  +N+I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +  C+    + AL++F+ + +     +   + T N +I    K+GR + A+++  A+   
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD---LQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  +VRTY+ + +     G  EE   L   M + G   N+ + NS +  L   GD+  A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743

Query: 379 LFVLSDMIDKHICPDHFTYS----ILTKGLCR--NGCVKQA-FKL--HNQVLEEHMVGDA 429
              L  + +KH   +  T S    +L+ G  +  + C++   F L  +++V E H++   
Sbjct: 744 GTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHSCIRGGIFSLCVNSEVQENHLLDSE 803

Query: 430 YSYNILINYLCKSNNLAAAK 449
              + L+  L    NL  +K
Sbjct: 804 SGVHFLLKLLNPPVNLVDSK 823


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 177/612 (28%), Positives = 293/612 (47%), Gaps = 42/612 (6%)

Query: 75  KLALEFYTWVGENNRF--SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           KLAL+F  WV +       H ++  C   H+LV  R +D A  ++  L   +  S   F 
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF- 109

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             L+ +Y +C + P+V+D L+R   + G  + + ++ + + + G + S++  N  L  +V
Sbjct: 110 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  E    W   KEM+      +V TFN++I  LC E   E++  L  +M KSG  P +V
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N +++  C+ G  + A++L   M     D+   +  T+N +I+  C+  R+     + 
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA---DVCTYNMLIHDLCRSNRIAKGYLLL 286

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M K  I  N  TY TLI+G++  G    A +L +EM+  GL PN+V +N+ I    +E
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G+ + AL +   M  K + P   +Y +L  GLC+N     A   + ++    +     +Y
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             +I+ LCK+  L  A  LL+ M   G+ PDI+TY  LI+G+CK G  + A ++   + +
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNT------------- 538
           V   PN +IY+++I   C+   L  A  + +A    G   D  T+N              
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 539 ----------------------LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
                                 LINGY  +G+  +AF++F EM  VG       Y  L+ 
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK G  ++A + +K +       D V Y TL+T   K+ +  + + L  +MV   + P
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646

Query: 637 DNQTYNAIISPL 648
           D+ TY ++IS L
Sbjct: 647 DSYTYTSLISGL 658



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 216/498 (43%), Gaps = 38/498 (7%)

Query: 149  FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            FD L+      G    A+ V  ++   GH  +   + + L  L K   +    K  K + 
Sbjct: 546  FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
            +     +   +N ++ A+CK   L +A+SL+  M++  I P+   +  +I+  C+ G   
Sbjct: 606  AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

Query: 269  FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
             A+ LF K     G+ VLPN V + C ++G  K G+ +     R  M   G   ++ T  
Sbjct: 666  IAI-LFAKEAEARGN-VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723

Query: 329  TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
             +IDGY+R G  E+   L  EM  +   PN   YN  +H      DV  +  +   +I  
Sbjct: 724  AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783

Query: 389  HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC-------- 440
             I PD  T   L  G+C +  ++   K+    +   +  D Y++N+LI+  C        
Sbjct: 784  GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843

Query: 441  ---------------------------KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                                       +++    ++ +L  M  +G+ P+   Y  LI+G
Sbjct: 844  FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903

Query: 474  YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
             C+ G+I+ A  V E M   +  P  V  ++++  L K    D A  LL+   ++ L+  
Sbjct: 904  LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963

Query: 534  I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            I ++ TL++    NG + EA  +   M N G+ ++ V YN+LI  LC  G    A EL +
Sbjct: 964  IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1023

Query: 593  VMILHGIIPDYVTYTTLV 610
             M   G + +  TY  L+
Sbjct: 1024 EMKGDGFLANATTYKALI 1041



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 164/349 (46%), Gaps = 4/349 (1%)

Query: 176  GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
            GH+  I   N  +    ++ +I +   L  EM +     N+ T+N++++   K   +  +
Sbjct: 714  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 236  LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
              LY  ++ +GI P+ +  + ++   C+   LE  LK+ +   +  G  V  +  T N +
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF-ICRGVEV--DRYTFNML 830

Query: 296  INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
            I+  C  G + +A ++   M   GI  +  T   ++    R    +E+  +  EM K+G+
Sbjct: 831  ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 890

Query: 356  MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             P +  Y   I+ L   GD++ A  V  +MI   ICP +   S + + L + G   +A  
Sbjct: 891  SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 950

Query: 416  LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
            L   +L+  +V    S+  L++  CK+ N+  A +L   M   GL  D+++Y  LI G C
Sbjct: 951  LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1010

Query: 476  KGGNIEGAVQVYENMKKVEKKPNLVIYNSIING-LCKDASLDAAKSLLQ 523
              G++  A ++YE MK      N   Y ++I G L ++ +   A  +L+
Sbjct: 1011 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+ILI    +   +  + ++   M + G  P + T   ++    K G     V V+  +K
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE---DVSVWSFLK 182

Query: 492 KVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
           ++ K+   P++  +N +IN LC + S + +  L+Q  ++ G    I TYNT+++ Y   G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +   A  +   M++ G+  +   YN+LI+ LC+     +   L++ M    I P+ VTY 
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           TL+  FS         +L ++M+  G+SP++ T+NA+I   + E
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346



 Score = 38.9 bits (89), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 40/85 (47%)

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y+ILI    + G  Q + E+ ++M L+G  P   T   ++    K+     V     +M+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
              + PD  T+N +I+ L  E S E
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFE 210


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 177/612 (28%), Positives = 293/612 (47%), Gaps = 42/612 (6%)

Query: 75  KLALEFYTWVGENNRF--SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           KLAL+F  WV +       H ++  C   H+LV  R +D A  ++  L   +  S   F 
Sbjct: 91  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF- 149

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             L+ +Y +C + P+V+D L+R   + G  + + ++ + + + G + S++  N  L  +V
Sbjct: 150 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 209

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  E    W   KEM+      +V TFN++I  LC E   E++  L  +M KSG  P +V
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N +++  C+ G  + A++L   M     D+   +  T+N +I+  C+  R+     + 
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA---DVCTYNMLIHDLCRSNRIAKGYLLL 326

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M K  I  N  TY TLI+G++  G    A +L +EM+  GL PN+V +N+ I    +E
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G+ + AL +   M  K + P   +Y +L  GLC+N     A   + ++    +     +Y
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             +I+ LCK+  L  A  LL+ M   G+ PDI+TY  LI+G+CK G  + A ++   + +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNT------------- 538
           V   PN +IY+++I   C+   L  A  + +A    G   D  T+N              
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566

Query: 539 ----------------------LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
                                 LINGY  +G+  +AF++F EM  VG       Y  L+ 
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK G  ++A + +K +       D V Y TL+T   K+ +  + + L  +MV   + P
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686

Query: 637 DNQTYNAIISPL 648
           D+ TY ++IS L
Sbjct: 687 DSYTYTSLISGL 698



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 216/498 (43%), Gaps = 38/498 (7%)

Query: 149  FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            FD L+      G    A+ V  ++   GH  +   + + L  L K   +    K  K + 
Sbjct: 586  FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
            +     +   +N ++ A+CK   L +A+SL+  M++  I P+   +  +I+  C+ G   
Sbjct: 646  AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705

Query: 269  FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
             A+ LF K     G+ VLPN V + C ++G  K G+ +     R  M   G   ++ T  
Sbjct: 706  IAI-LFAKEAEARGN-VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763

Query: 329  TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
             +IDGY+R G  E+   L  EM  +   PN   YN  +H      DV  +  +   +I  
Sbjct: 764  AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823

Query: 389  HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC-------- 440
             I PD  T   L  G+C +  ++   K+    +   +  D Y++N+LI+  C        
Sbjct: 824  GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883

Query: 441  ---------------------------KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                                       +++    ++ +L  M  +G+ P+   Y  LI+G
Sbjct: 884  FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943

Query: 474  YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
             C+ G+I+ A  V E M   +  P  V  ++++  L K    D A  LL+   ++ L+  
Sbjct: 944  LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003

Query: 534  I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            I ++ TL++    NG + EA  +   M N G+ ++ V YN+LI  LC  G    A EL +
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1063

Query: 593  VMILHGIIPDYVTYTTLV 610
             M   G + +  TY  L+
Sbjct: 1064 EMKGDGFLANATTYKALI 1081



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 164/349 (46%), Gaps = 4/349 (1%)

Query: 176  GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
            GH+  I   N  +    ++ +I +   L  EM +     N+ T+N++++   K   +  +
Sbjct: 754  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813

Query: 236  LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
              LY  ++ +GI P+ +  + ++   C+   LE  LK+ +   +  G  V  +  T N +
Sbjct: 814  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF-ICRGVEV--DRYTFNML 870

Query: 296  INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
            I+  C  G + +A ++   M   GI  +  T   ++    R    +E+  +  EM K+G+
Sbjct: 871  ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930

Query: 356  MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             P +  Y   I+ L   GD++ A  V  +MI   ICP +   S + + L + G   +A  
Sbjct: 931  SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990

Query: 416  LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
            L   +L+  +V    S+  L++  CK+ N+  A +L   M   GL  D+++Y  LI G C
Sbjct: 991  LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050

Query: 476  KGGNIEGAVQVYENMKKVEKKPNLVIYNSIING-LCKDASLDAAKSLLQ 523
              G++  A ++YE MK      N   Y ++I G L ++ +   A  +L+
Sbjct: 1051 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1099



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+ILI    +   +  + ++   M + G  P + T   ++    K G     V V+  +K
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE---DVSVWSFLK 222

Query: 492 KVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
           ++ K+   P++  +N +IN LC + S + +  L+Q  ++ G    I TYNT+++ Y   G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +   A  +   M++ G+  +   YN+LI+ LC+     +   L++ M    I P+ VTY 
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           TL+  FS         +L ++M+  G+SP++ T+NA+I   + E
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386



 Score = 38.9 bits (89), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 40/85 (47%)

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y+ILI    + G  Q + E+ ++M L+G  P   T   ++    K+     V     +M+
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
              + PD  T+N +I+ L  E S E
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFE 250


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 291/567 (51%), Gaps = 33/567 (5%)

Query: 109 RFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA--- 161
           R D     +GN++      ++++    L+GL       K T    D ++R  TQ+G    
Sbjct: 106 RLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCAD----KRTSDAMDIVLRRMTQLGCIPN 161

Query: 162 ----------------TEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKL 203
                           ++ A +++Q +   G      + ++   ++   K  ++ + +  
Sbjct: 162 VFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y EM+  G + NV T++ +I ALCK   +++A+ +   M+K+G+ PN   +N I++  C 
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G  + A+   +KM     D V P+ VT+N +++  CK GR   A ++  +M K G+   
Sbjct: 282 SGQPKEAIGFLKKM---HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY TL+ GYA  G+  E   L D MV+ G+ PN+ V++  I     +G V+ A+ V S
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  + + PD  TY  +   LC++G V+ A +   Q+++E +      YN LI+ LC  +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               AK+L+  M+ RG+  D I + ++ID +CK G +  + ++++ M ++  KP+++ Y+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G C    +D A  LL +   +G+  D +TYNTLINGY    ++ +A  +F EM + 
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G++ + + YNI++  L +      A+EL   +   G   +  TY  ++    KN   +E 
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +  ++ L+ +  + +T+N +I  LL
Sbjct: 639 LRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 202/425 (47%), Gaps = 15/425 (3%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE-----FALKLFRKMGVMSGDSVLP 287
           E+A  ++  +L+ G   ++   N      C + D+       A+  + +M     D V P
Sbjct: 36  EDARHVFDELLRRGRGASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTP 89

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+  ++   C  GR++        +IK G   +   +  ++ G      + +A+ + 
Sbjct: 90  NLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIV 149

Query: 348 -DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HICPDHFTYSILTKGL 404
              M + G +PN   YN  +  L  +   + AL +L  M D      PD  +Y+ +  G 
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G + +A+  ++++L+  ++ +  +Y+ +I  LCK+  +  A ++L+SM+  G++P+ 
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY +++ GYC  G  + A+   + M     +P++V YNS+++ LCK+     A+ +  +
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             + GL   I TY TL+ GY   G + E   +   M   GI  N   ++ILI    K G 
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             QA  +   M   G+ PD VTY T++    K+   E+ +   + M+   +SP N  YN+
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 644 IISPL 648
           +I  L
Sbjct: 450 LIHSL 454



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/581 (22%), Positives = 229/581 (39%), Gaps = 103/581 (17%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F   +LL G      S   LE L+ + D    C      +  ++    + G  + AY   
Sbjct: 163 FSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTY 222

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            ++  +G   ++  +++ ++ L K   + +  ++   MV  G + N  T+N +++  C  
Sbjct: 223 HEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM------------ 277
            + +EA+    +M   G+ P+VV +N +++  C+ G    A K+F  M            
Sbjct: 283 GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342

Query: 278 --------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
                                +M  + + PN    + +I  + K G+V+ A  +   M +
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQ 402

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G++ +  TY T+I    + G  E+A+R  ++M+   L P N+VYNS IH L      + 
Sbjct: 403 QGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDK 462

Query: 378 ALFVLSDMIDKHIC-----------------------------------PDHFTYSILTK 402
           A  ++ +M+D+ IC                                   PD  TYS L  
Sbjct: 463 AKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 522

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C  G + +A KL   ++   M  D  +YN LIN  CK + +  A  L   M   G+ P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582

Query: 463 DIITY--------------------------GT---------LIDGYCKGGNIEGAVQVY 487
           DIITY                          GT         ++ G CK    + A++++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           +N+   + +     +N +I  L K    D AK L  A    GL+ D  TY+ +       
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + E   +F  M   G   N    N ++  L + G   +A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 181/375 (48%), Gaps = 3/375 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+ A  + G  + A  V  K++ +G +     +   +  L K   +    + +++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +          +N +I++LC   K ++A  L   ML  GI  + + FN II+  C+ G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V P+ +T++ +I+G+C  G+++ A ++  +M+  G+  +  TY
Sbjct: 496 IESEKLF---DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY +    E+AL L  EM   G+ P+ + YN  +  LF       A  +   + +
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITE 612

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K      
Sbjct: 613 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 672

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +++   GL+PD+ TY  + +   + G +E    ++ +M++     N  + NSI+ 
Sbjct: 673 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 732

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 733 KLLQRGDITRAGTYL 747



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/322 (21%), Positives = 142/322 (44%), Gaps = 25/322 (7%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA-----TPAVFDALV 153
           +++H L  + ++D A  L+  ++         F   ++DS+  CK      +  +FD +V
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH--CKEGRVIESEKLFDLMV 506

Query: 154 RACTQ---------------IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           R   +                G  + A  ++  +   G       +N  ++   K++ + 
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L++EM S G   ++ T+N+++  L +  +   A  LY  + +SG    +  +N+I+
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +  C+    + AL++F+ + +     +   + T N +I    K+GR + A+++  A+   
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD---LQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  +VRTY+ + +     G  EE   L   M + G   N+ + NS +  L   GD+  A
Sbjct: 684 GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743

Query: 379 LFVLSDMIDKHICPDHFTYSIL 400
              L  + +KH   +  T S+ 
Sbjct: 744 GTYLFMIDEKHFSLEASTASLF 765


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 179/623 (28%), Positives = 299/623 (47%), Gaps = 65/623 (10%)

Query: 66  VVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANS 125
           V S  R S +LA++ +  V  + R S S+++  A++          +AL   GNL +   
Sbjct: 166 VTSSARGSLRLAVDAF-HVLSSRRASPSVKTCNALL----------EALARTGNLGATCK 214

Query: 126 VSPLEFLEGLLDSYEICKA-TPA--VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
           V          D    CK  TP    + ++++A  ++G  +  + ++  L   G   S  
Sbjct: 215 V---------FDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAG 265

Query: 183 A--WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           A  +N  +  L K   +    +L   M       ++ TF ++I  L +  +  E  +L  
Sbjct: 266 AVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLR 325

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M   GI PN V  N +I+  C+ G    A++LF +M       +   +VT+N I    C
Sbjct: 326 EMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEM---VSKEMKSTAVTYNLIARALC 382

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY-ARGGSSEEALRLCDEMVKRGLMPNN 359
           K G +E AE I   M+  G+  +   + +++ G   R G  E  +RL  EMVKRG+ PN+
Sbjct: 383 KEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPND 442

Query: 360 VVY-----------------------------------NSTIHWLFAEGDVEGALFVLSD 384
            +                                    N+ IH L    +++GA  VL  
Sbjct: 443 ALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRT 502

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M++K +  D+ TY+I+ +G C++  +++A KL + ++ +    DAY +N +I+  C    
Sbjct: 503 MVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGK 562

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A  LL  M + G+ PD+++YGT+IDGYCK  +I+ A +    +     KPN VIYN+
Sbjct: 563 MEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNA 622

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I G  ++ ++  A  +L   + IG+    +TY +L++     G + EA  MF + R   
Sbjct: 623 LIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNS 682

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I V  VGY I+I  LCK G   +A    + M    I P+ +TYTTL+  + K+ + EE  
Sbjct: 683 IEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEAS 742

Query: 624 ELHDDMVLSGVSPDNQTYNAIIS 646
           +L D+MV SG+ PDN +YN +++
Sbjct: 743 KLFDEMVSSGIVPDNVSYNTLVT 765



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 172/340 (50%), Gaps = 7/340 (2%)

Query: 150 DALVRACT----QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           DAL+ ACT    Q    + A  +  K+  KG  ++I   N  +  L +   +    ++ +
Sbjct: 442 DALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLR 501

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            MV+ G   +  T+N++I   CK+ K+EEAL L   M++ G  P+   FN II+  C +G
Sbjct: 502 TMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLG 561

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +E AL L  +M +   + V P+ V++  II+G+CK   ++ A E    ++  G+  N  
Sbjct: 562 KMEEALHLLGQMKI---EGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAV 618

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  LI GY R G+   A+ + D M   G+ P NV Y S +HW+   G V+ A  +    
Sbjct: 619 IYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQS 678

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               I      Y+I+ +GLC+ G + +A     ++    +  +  +Y  L+   CKS N 
Sbjct: 679 RKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNN 738

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             A +L   M+  G++PD ++Y TL+ G+ +  +++ A++
Sbjct: 739 EEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIE 778



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 37/411 (9%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW- 201
           K+T   ++ + RA  + G  E A  +++++   G ++    +N+ ++ L  L   GR   
Sbjct: 368 KSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGL--LQRTGRLES 425

Query: 202 --KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             +L  EMV  G   N          LC+  + +EA+ ++ +ML+ G+  N+   N +I+
Sbjct: 426 VVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIH 485

Query: 260 EACQVGDLEFALKLFRKM--GVMSGDSVL------------------------------P 287
             C+  +++ A ++ R M    M  D++                               P
Sbjct: 486 GLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKP 545

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++   N II+ +C LG++E A  +   M   G+  +V +Y T+IDGY +    ++A    
Sbjct: 546 DAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYL 605

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E++  GL PN V+YN+ I      G++ GA+ VL  M    I P + TY  L   +C  
Sbjct: 606 NELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHA 665

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V +A  +  Q  +  +      Y I+I  LCK   +  A      M  R + P+ ITY
Sbjct: 666 GLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITY 725

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            TL+  YCK GN E A ++++ M      P+ V YN+++ G  +  SLD A
Sbjct: 726 TTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKA 776



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 110/223 (49%), Gaps = 8/223 (3%)

Query: 433 NILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM- 490
           N L+  L ++ NL A  ++   M   + + P+  +Y ++I   CK G ++   ++  ++ 
Sbjct: 197 NALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLI 256

Query: 491 -KKVEKKPNLVIYNSIINGLCKDASLDAA---KSLLQASQRIGLLDAITYNTLINGYFIN 546
              +++    V YN +++ LCK   +D A   K  ++ S+    +  +T+  LING   +
Sbjct: 257 HAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSM--VTFGILINGLKRS 314

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            +  E  A+  EM  +GI  N+V  N LI++ C+ G + +A  L   M+   +    VTY
Sbjct: 315 DRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTY 374

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             +     K    E    + ++M+ +G++  +  +N++++ LL
Sbjct: 375 NLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLL 417



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 7/232 (3%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIV---RGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           S ++LIN    S+   + +  + +  V   R   P + T   L++   + GN+    +V+
Sbjct: 157 SSDLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVF 216

Query: 488 ENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD---AITYNTLINGY 543
           + M+  +   PN   Y S+I  LCK   +D    +L      GL     A+ YN L++  
Sbjct: 217 DEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDAL 276

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
             +G++ EA  +   M    +A + V + ILIN L +   + +   L++ M   GI P+ 
Sbjct: 277 CKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNE 336

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           V    L+    +     E I L D+MV   +     TYN I   L  E   E
Sbjct: 337 VICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEME 388



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 4/171 (2%)

Query: 134 GLLDSYEICKATPA--VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           G+LD+ E     P    + +L+      G  + A  + ++ +     V +  +   +  L
Sbjct: 638 GVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGL 697

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K+ ++      ++EM S     N  T+  ++YA CK    EEA  L+  M+ SGI P+ 
Sbjct: 698 CKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDN 757

Query: 252 VCFNMIINEACQVGDLEFALKLFRKM-GVMSGDSVLPNSVTHNCIINGFCK 301
           V +N ++    QV  L+ A++   ++  +M+ +  L N V  N I   +C+
Sbjct: 758 VSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDCLDN-VLVNRITTPWCE 807


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 182/681 (26%), Positives = 321/681 (47%), Gaps = 74/681 (10%)

Query: 3   SAFCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSL 62
           S F    + S SPL R  ++ +  ++P++      +I       K   L+ M P+++ S 
Sbjct: 35  SPFTRRQFCSVSPLIR--NLPEDESDPTSVPHRLFSILSKPNWHKCPSLKSMVPAISPSH 92

Query: 63  VNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS 122
           V+ + S     PK AL F  W+ +N R+ HS+ S  +++ LL+N                
Sbjct: 93  VSSLFS-LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLIN---------------- 135

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK-----GH 177
            N    + F   LL               ++++C  +  T    D+ +K+         +
Sbjct: 136 -NGYVGVVFKIRLL---------------MIKSCDSVADTLFVLDLCRKMNKDESFELKY 179

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
            + I  +N  L+ L +   +    ++Y EM+      N+ T+N ++   CK   +EEA  
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQ 239

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV------------------ 279
               ++++G+ P+   +  +I   CQ  DL+ A K+F++M +                  
Sbjct: 240 YVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC 299

Query: 280 --------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
                         M  D   P   T+  +I   C   R   A  +   M + GI  N+ 
Sbjct: 300 VERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIH 359

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  LID        E+A  L  +M+++GLMPN + YN+ I+     G +E AL V+  M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             +++ P+  TY+ L KG C+   V +A  + N++LE  ++ D  +YN LI+  C+S N 
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
            +A +LLS M  RGL+PD  TY ++ID  CK   +E A  +++++++ +  PN+V+Y ++
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 506 INGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+G CK   ++ A  +L+    +  L +++T+N LI+G   +GK+ EA  +  +M  + +
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
                   ILI+ L K G +  A    + M+  G  PD  TYTT +  + +    ++  +
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           +   M  +GVSPD  TY+++I
Sbjct: 659 MVAKMKENGVSPDLFTYSSLI 679



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 247/470 (52%), Gaps = 15/470 (3%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFNLVIYALCKECKLEEALSL 238
           S++++ + L+ L+    +G  +K+   M+ SC  V +     L +  LC++   +E+  L
Sbjct: 122 SVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADT----LFVLDLCRKMNKDESFEL 177

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
            Y+++       + C+N ++N   + G ++   +++ +M     D V PN  T+N ++NG
Sbjct: 178 KYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEM---LEDKVCPNIYTYNKMVNG 227

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           +CK+G VE A +    +++AG+D +  TY +LI GY +    + A ++  EM  +G   N
Sbjct: 228 YCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRN 287

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V Y   IH L  E  ++ A+ +   M D    P   TY++L K LC +    +A  L  
Sbjct: 288 EVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVK 347

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ E+ +  + ++Y +LI+ LC    L  A++LL  M+ +GL+P++ITY  LI+GYCK G
Sbjct: 348 EMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
            IE A+ V E M+    +PN   YN +I G CK     A   L +  +R  L D +TYN+
Sbjct: 408 MIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNS 467

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI+G   +G    A+ + S M + G+  +   Y  +I+ LCK    ++A +L   +    
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKD 527

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +IP+ V YT L+  + K     E   + + M+     P++ T+NA+I  L
Sbjct: 528 VIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL 577



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 253/517 (48%), Gaps = 23/517 (4%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +L+    Q    + A+ V +++ +KG   +  A+ + +  L     I     L+ +M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM 314

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                   V T+ ++I ALC   +  EAL+L   M + GI PN+  + ++I+  C    L
Sbjct: 315 KDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKL 374

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A +L   +G M    ++PN +T+N +ING+CK G +E A ++   M    +  N RTY
Sbjct: 375 EKAREL---LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTY 431

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI GY +  +  +A+ + ++M++R ++P+ V YNS I      G+ + A  +LS M D
Sbjct: 432 NELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + PD +TY+ +   LC++  V++A  L + + ++ ++ +   Y  LI+  CK+  +  
Sbjct: 491 RGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNE 550

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+ +  +P+ +T+  LI G C  G ++ A  + E M K++ +P +     +I+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIH 610

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L KD   D A    Q     G   DA TY T I  Y   G++ +A  M ++M+  G++ 
Sbjct: 611 RLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSP 670

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF-------SKNCSP 619
           +   Y+ LI      G    A  ++K M   G  P   T+ +L+           K   P
Sbjct: 671 DLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEP 730

Query: 620 -----------EEVIELHDDMVLSGVSPDNQTYNAII 645
                      + V+EL + MV  GV+P+ ++Y  ++
Sbjct: 731 GVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLM 767



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 240/538 (44%), Gaps = 50/538 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+         + A D+  K+K      ++  +   +  L          
Sbjct: 284 CRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L KEM   G   N++T+ ++I +LC +CKLE+A  L  +ML+ G+ PNV+ +N +IN  
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 262 CQVGDLEFALKLF----------------------------RKMGVMSG---DSVLPNSV 290
           C+ G +E AL +                             + MGV++      VLP+ V
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVV 463

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +I+G C+ G  + A  +   M   G+  +  TY ++ID   +    EEA  L D +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            ++ ++PN V+Y + I      G V  A  +L  M+ K+  P+  T++ L  GLC +G +
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL 583

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K+A  L  ++++  +     +  ILI+ L K  +   A +    M+  G  PD  TY T 
Sbjct: 584 KEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTF 643

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I  YC+ G ++ A  +   MK+    P+L  Y+S+I G       ++A  +L+     G 
Sbjct: 644 IQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGC 703

Query: 531 LDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             +  T+ +LI                 EM+   +   + G  ++ N +     +    E
Sbjct: 704 EPSQHTFLSLIKHLL-------------EMKYGKVKGGEPGVCVMSNMM----EFDIVVE 746

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL-SGVSPDNQTYNAIIS 646
           L++ M+ HG+ P+  +Y  L+    +  +     ++ D M    G+SP    +NA++S
Sbjct: 747 LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLS 804



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 138/600 (23%), Positives = 265/600 (44%), Gaps = 74/600 (12%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H L   RR D+A+ L   +   +                 C  T   +  L++A    
Sbjct: 294 LIHGLCVERRIDEAMDLFVKMKDDD-----------------CYPTVRTYTVLIKALCGS 336

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                A +++++++ KG   +IH +   +  L    ++ +  +L  +M+  G + NV T+
Sbjct: 337 ERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITY 396

Query: 220 NLVIYALCKECKLEEALSLYY----------------------------------RMLKS 245
           N +I   CK   +E+AL +                                    +ML+ 
Sbjct: 397 NALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLER 456

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
            + P+VV +N +I+  C+ G+ + A   +R + +M+   ++P+  T+  +I+  CK  RV
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSA---YRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRV 513

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           E A ++  ++ +  +  NV  Y  LIDGY + G   EA  + ++M+ +  +PN++ +N+ 
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           IH L  +G ++ A  +   M+   + P   T +IL   L ++G    A++   Q+L    
Sbjct: 574 IHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGT 633

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             DA++Y   I   C+   L  A+ +++ M   G+ PD+ TY +LI GY   G    A  
Sbjct: 634 KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFV 693

Query: 486 VYENMKKVEKKPNLVIYNSIIN---------------GLCKDASL---DAAKSLLQASQR 527
           V + M     +P+   + S+I                G+C  +++   D    LL+    
Sbjct: 694 VLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVE 753

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV-GIAVNKVGYNILINFLCKFGCYQ 585
            G+  +A +Y  L+ G    G +  A  +F  M+   GI+ +++ +N L++  CK   + 
Sbjct: 754 HGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHN 813

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A +++  MI  G +P   +   L+ R  K    E    +  +++  G   D   +  II
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIII 873



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 207/459 (45%), Gaps = 30/459 (6%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           +V +    D     GN  SA  +  L    GL+         P  + +++ +  +    E
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV-------PDPWTYTSMIDSLCKSKRVE 514

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A D+   L+ K    ++  +   +    K  ++     + ++M+S   + N  TFN +I
Sbjct: 515 EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
           + LC + KL+EA  L  +M+K  + P V    ++I+   + GD + A + F++M + SG 
Sbjct: 575 HGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM-LSSGT 633

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
              P++ T+   I  +C+ GR++ AE++   M + G+  ++ TY++LI GY   G +  A
Sbjct: 634 K--PDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSA 691

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAE--GDVEGA----------------LFVLSDM 385
             +   M   G  P+   + S I  L     G V+G                 + +L  M
Sbjct: 692 FVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKM 751

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA-YSYNILINYLCKSNN 444
           ++  + P+  +Y  L  G+C  G ++ A K+ + + ++  +  +   +N L++  CK   
Sbjct: 752 VEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEK 811

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
              A +++  MI  G +P + +   LI    K G  E    V++N+ +     + + +  
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKI 871

Query: 505 IINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLING 542
           II+G+ K   ++A   L    ++ G    + TY+ LI G
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%)

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           YNTL+N     G + E   ++ EM    +  N   YN ++N  CK G  ++A + + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             G+ PD+ TYT+L+  + +    +   ++  +M L G   +   Y  +I  L  E+  +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 656 D 656
           +
Sbjct: 306 E 306


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 176/650 (27%), Positives = 322/650 (49%), Gaps = 20/650 (3%)

Query: 2   FSAFCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNS 61
           F A  N L++    LS+          P   D + R + +    R++  L  ++ S +N 
Sbjct: 54  FLASTNALFRDELKLSQ----------PDLVDRISRLLVL----RRFDALANLSFSFSNE 99

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL- 120
           L++ V+   R +P  +LEF+    +  +F   + S C IVH+L   R + +  + +  L 
Sbjct: 100 LMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELV 159

Query: 121 -MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
            +  N+       + L+  Y     +P VFD +++   + G T+ A  V   +   G   
Sbjct: 160 VLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVP 219

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+ + N+ LS+LV+  E  +   +Y++M++ G + ++ ++ +++ A CKE +++EA +  
Sbjct: 220 SLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFV 279

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M +S   PNVV +N +I+    +GD+  A K+   + +MS   +  NS T+  +I G+
Sbjct: 280 KEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKV---LALMSEKGIPENSRTYTLLIKGY 336

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G++E AE++   M++  +  +   Y  LI  Y   G  ++ALR+ D M+K GL  N 
Sbjct: 337 CKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNT 396

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V+ NS I+     G V  A  VL  M D ++ PD + Y+ L  G C+     +AFKL ++
Sbjct: 397 VICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDE 456

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +  + +     +YN L+  L    ++  A  + + M  RG+ P+ +TY TL+D + K G 
Sbjct: 457 MHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGT 516

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
            + A+ ++++        ++ +YN++I G CK   L  A+ +    + +G   D ITY T
Sbjct: 517 FDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRT 576

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI+GY   G + EA  +       GI+ +   YN LI  + +    Q+   L+  M    
Sbjct: 577 LIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRE 636

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + P+ VTY +L+  +      ++    +  M+  G++P+    + I+S L
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSL 686



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 265/564 (46%), Gaps = 29/564 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H      R DDAL +   ++            GL  +  IC       ++L+    ++
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKV----------GLKMNTVIC-------NSLINGYCKL 409

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A +V+  +K        + +N  L    K  +  + +KL  EM + G    V T+
Sbjct: 410 GHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTY 469

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N ++  L     +E AL ++  M K G+ PN V +  +++   +VG  + A+ +++   +
Sbjct: 470 NTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKD-AL 528

Query: 280 MSGDSVLPNSVT-HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
             G      S+T +N +I GFCK+ ++  A+EI   M + G   +  TY TLIDGY + G
Sbjct: 529 SKG---FTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +  EAL+L D   + G+  +  +YNS I  +F   +++    +L++M ++ + P+  TY 
Sbjct: 586 NLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYG 645

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G + +A+  + +++++ +  +    + +++ L +   +  A  +L  +   
Sbjct: 646 SLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQI--- 702

Query: 459 GLIPDIITYGTLID-GYCKGGNIEGAVQVYENMKKVEKKP--NLVIYNSIINGLCKDASL 515
             I  I  +   ++       ++E    V    KK    P  N ++YN  I GLCK  ++
Sbjct: 703 ADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNI 762

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           D  + +L      G   D  TY +LI+     GK+ EAF +  +M N G+  N V YN L
Sbjct: 763 DDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNAL 822

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           IN LCK G   +AR L   +   G+ P  VTY TL+  + K     E +EL D M   G+
Sbjct: 823 INGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882

Query: 635 SPDNQTYNAIISPLLGEKSAEDQV 658
            P + TY+ +I  L  E  +E  V
Sbjct: 883 CPSSITYSTLIHGLYMEGKSEQSV 906



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 228/475 (48%), Gaps = 12/475 (2%)

Query: 133 EGLLDSYEICKA--------TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           E  + ++++C          T   ++ L++    +G  E A  +   +  +G + +   +
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTY 504

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
              L    K+    R   ++K+ +S G+ +++  +N +I   CK  KL +A  ++ +M +
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G  P+ + +  +I+  C+VG+L  ALKL     +   D +  ++  +N +I G  +   
Sbjct: 565 LGFPPDEITYRTLIDGYCKVGNLVEALKL---KDMSERDGISSSTEMYNSLITGVFRSEE 621

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++    +   M    +  NV TY +LI G+   G  ++A     +M+ +G+ PN ++ + 
Sbjct: 622 LQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSK 681

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            +  L+  G ++ A  +L  + D      H     L K   R+   ++      +     
Sbjct: 682 IVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSI 741

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
            + +   YNI I  LCKS N+   +++LS ++++G  PD  TY +LI      G +  A 
Sbjct: 742 PISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAF 801

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGY 543
            + ++M      PN+V+YN++INGLCK  +LD A+ L     R GL    +TYNTLI+GY
Sbjct: 802 CLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGY 861

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
              G+  EA  +  +MR  GI  + + Y+ LI+ L   G  +Q+  L+  M+  G
Sbjct: 862 CKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 157/335 (46%), Gaps = 9/335 (2%)

Query: 167 DVIQKLKVK------GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
           ++++ LK+K      G S S   +N+ ++ + +  E+ +   L  EM +     NV T+ 
Sbjct: 586 NLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYG 645

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            +I   C +  +++A + Y++M+  GI PN++  + I++   + G ++ A  +  ++  +
Sbjct: 646 SLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADI 705

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
             D +  ++ +     +    L   +  +      +   I  N+  Y   I G  +  + 
Sbjct: 706 --DPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNI-VYNIAITGLCKSKNI 762

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           ++  R+  +++ +G  P+N  Y S IH   A G V  A  +  DMI+  + P+   Y+ L
Sbjct: 763 DDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNAL 822

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GLC++G + +A +L N++  + +     +YN LI+  CK      A +L   M   G+
Sbjct: 823 INGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGI 882

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
            P  ITY TLI G    G  E +V +   M K  K
Sbjct: 883 CPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGK 917


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 183/646 (28%), Positives = 300/646 (46%), Gaps = 43/646 (6%)

Query: 51  LEQMAPSLTNSLVNRVVS--EFRKSPKLALEFYTWVGENNRFS--HSLESSCAIVHLLVN 106
           L+Q  P LT  ++  ++S       P+  L F+ W   N   S  HS +    ++  L++
Sbjct: 42  LQQFIPHLTLPIIISILSYKPLHSQPETLLSFFKWFQSNAHSSLIHSPKPLLTLLPPLLS 101

Query: 107 WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAY 166
            R+F DA  L+ N +S++   P   L   L   +     P + D  + A          +
Sbjct: 102 RRKFSDAKSLLLNFISSDH--PHHSLHAHLLRSDHTIPKP-LLDTSLAAYVISKQPHLGH 158

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF---WKLYKEMVSCGYVENVNTFNLVI 223
            +  K+K      ++   N  L+ LV+ N         +++++ V  G   NVNTFN++I
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC------QVGDLEFALK---LF 274
           +  C +   EEAL L  +M + G  P+ V +N ++   C      QV DL   +K   LF
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 275 RK-----------------------MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
                                    + +M+G  +LP+  T+N ++ G C  G+++ A  +
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
           R  M    +  +V TY TLIDG      S+ A +L +EM  RG+  N V +N  I W   
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           EG ++ A  V+  M++    PD FTY+ +  G C+ G + +A+K+ +++  + +  D ++
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            N L++ +C    L  A  L      RG I D +TYGTLI GY K    + A++++E MK
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +      ++ YN+II GLC     D A   L      GL+ D  T N +I+GY   G + 
Sbjct: 519 ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVE 578

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +AF   ++M    +  +    NIL+  LC+ G  ++   L    I  G   D VTY  ++
Sbjct: 579 KAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIII 638

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + F K    E+  +L  +M    + PD  TYNAI++ L      E+
Sbjct: 639 SSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEE 684



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 218/445 (48%), Gaps = 15/445 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ +VR     G  + A  +  K++       +  +N  +    +       +KL +EM
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEM 377

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G  EN  T N++I   C E K++EA ++  +M++SG  P+   +N +IN  C+ G +
Sbjct: 378 KARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKM 437

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A K+  +MG      +  ++ T N +++  C   +++ A  +     K G   +  TY
Sbjct: 438 AEAYKMMDEMG---RKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTY 494

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI GY +   ++ AL+L +EM + G++   + YN+ I  L   G  + A+  L+++++
Sbjct: 495 GTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLE 554

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + PD  T +I+  G C  G V++AF+ HN+++E  +  D ++ NIL+  LC+   L  
Sbjct: 555 KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK 614

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              L ++ I +G   D +TY  +I  +CK   +E A  +   M+    +P+   YN+I+ 
Sbjct: 615 GLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVT 674

Query: 508 GLCKDASLDAAKSL----LQASQRIGLLDA--------ITYNTLINGYFINGKIAEAFAM 555
           GL K    + A+ L     +  Q++   D         + Y+  I+     GK  +A  +
Sbjct: 675 GLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKL 734

Query: 556 FSEMRNVGIAVNKVGYNILINFLCK 580
           F +    G+++NK  Y  L++ L K
Sbjct: 735 FQQAEQKGVSLNKYTYIKLMDGLLK 759



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/587 (24%), Positives = 244/587 (41%), Gaps = 85/587 (14%)

Query: 109 RFDDALL----LMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGAT 162
           RF   LL    L+  L+ +NS   L F   +          P V  F+ L+        T
Sbjct: 168 RFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNT 227

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A  +I ++   G       +N  L+ L K +++ +   L  +M + G   N NT+N++
Sbjct: 228 EEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNIL 287

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV--- 279
           ++  CK   L+EA  +   M   G+ P+V  +N ++   C  G ++ A++L  KM     
Sbjct: 288 VHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKL 347

Query: 280 -----------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
                                        M    V  N VTHN +I  FC  G+++ A  
Sbjct: 348 VPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASN 407

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+++G   +  TY T+I+GY + G   EA ++ DEM ++GL  +    N+ +H + 
Sbjct: 408 VMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMC 467

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            E  ++ A  +      +    D  TY  L  G  ++    +A KL  ++ E  +V    
Sbjct: 468 LEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATII 527

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN +I  LC S     A   L+ ++ +GL+PD  T   +I GYC  G +E A Q +  M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKI 549
            +   KP++   N ++ GLC++  L+   +L       G  +D +TYN +I+ +    ++
Sbjct: 588 VEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRL 647

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNIL----------------------------------- 574
            +AF + +EM    +  ++  YN +                                   
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPE 707

Query: 575 -----------INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
                      I+ LC  G Y+ A +L +     G+  +  TY  L+
Sbjct: 708 LGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLM 754



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 14/305 (4%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + AY +  K + +G+ +    +   +    K  +  R  KL++EM   G V  + T+N +
Sbjct: 473 DDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTI 532

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I  LC   K ++A+     +L+ G+ P+    N+II+  C  G +E A +   KM     
Sbjct: 533 IRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM---VE 589

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
            S+ P+  T N ++ G C+ G +E    +    I  G   +  TY  +I  + +    E+
Sbjct: 590 HSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLED 649

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-----------HIC 391
           A  L  EM  + L P+   YN+ +  L   G  E A  +     +K            + 
Sbjct: 650 AFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELG 709

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
                YS     LC  G  K A KL  Q  ++ +  + Y+Y  L++ L K         L
Sbjct: 710 TSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSL 769

Query: 452 LSSMI 456
           L  M+
Sbjct: 770 LPFMV 774



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 4/178 (2%)

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKD---ASLDAAKSLLQASQRIGLLDAI-TYNTLI 540
           Q++  MK++  +PNL+  N+++N L +     SL  ++ + Q + ++G+   + T+N LI
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +GY  +    EA  + ++M   G   + V YN ++  LCK     Q R+L+  M   G+ 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           P+  TY  LV  + K    +E  E+ + M   G+ PD  TYN ++  L  E   ++ V
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAV 336


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/383 (37%), Positives = 212/383 (55%), Gaps = 4/383 (1%)

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E KL++A      M   G  PNVV +N II+     G++E A ++   M V     + P+
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV---KGIEPD 242

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           S T+  +I+G CK GR+E A  +   M++ G+  N  TY TLIDGY   G  E A    D
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EMVK+G+MP+   YN  +H LF EG +  A  ++ +M  K I PD  TY+IL  G  R G
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
             K+AF LHN++L + +     +Y  LI  L + N +  A  L   ++ +G+ PD+I + 
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            +IDG+C  GN+E A  + + M +    P+ V +N+++ G C++  ++ A+ LL   +  
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  D I+YNTLI+GY   G I +AF +  EM ++G     + YN LI  LCK      A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542

Query: 588 RELMKVMILHGIIPDYVTYTTLV 610
            EL+K M+  GI PD  TY +L+
Sbjct: 543 EELLKEMVNKGISPDDSTYLSLI 565



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 205/381 (53%), Gaps = 2/381 (0%)

Query: 267 LEFALKLFRK-MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           LE  LK  R+ +G M G    PN V++N II+G+   G +E A  I  AM   GI+ +  
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY +LI G  + G  EEA  L D+MV+ GL+PN V YN+ I     +GD+E A     +M
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           + K I P   TY++L   L   G + +A  +  ++ ++ ++ DA +YNILIN   +  N 
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L + M+ +G+ P  +TY +LI    +   ++ A  ++E +      P+++++N++
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+G C + +++ A  LL+   R  +  D +T+NTL+ G    GK+ EA  +  EM+  GI
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGI 484

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             + + YN LI+   + G  + A  +   M+  G  P  +TY  L+    KN   +   E
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 544

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           L  +MV  G+SPD+ TY ++I
Sbjct: 545 LLKEMVNKGISPDDSTYLSLI 565



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 244/516 (47%), Gaps = 50/516 (9%)

Query: 29  PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENN 88
           P TZ+++ +++       +W  +EQ++P+LT +L++ V+      P+L  +F   +    
Sbjct: 68  PITZEVISKSVL----SSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHL---- 119

Query: 89  RFSHSLE--SSCAIVHLLVNW---------------------RRFDDALLLMGNLMSANS 125
              H L+  S C  V LL                        R   D L L  + +S  S
Sbjct: 120 -HPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKS 178

Query: 126 VSPLEFLEGLLDS-------YEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKG 176
               + LEG L          E     P V  ++ ++   +  G  EGA  ++  ++VKG
Sbjct: 179 SIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 238

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
                + + + +S + K   +     L+ +MV  G V N  T+N +I   C +  LE A 
Sbjct: 239 IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAF 298

Query: 237 SLYYRMLKSGIWPNVVCFNMIINE---ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           S    M+K GI P+V  +N++++      ++G+ +  +K  RK G+      +P+++T+N
Sbjct: 299 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI------IPDAITYN 352

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +ING+ + G  + A ++   M+  GI+    TY +LI   +R    +EA  L ++++ +
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P+ +++N+ I    A G+VE A  +L +M  K + PD  T++ L +G CR G V++A
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L +++    +  D  SYN LI+   +  ++  A  +   M+  G  P ++TY  LI  
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            CK    + A ++ + M      P+   Y S+I G+
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 141/304 (46%), Gaps = 36/304 (11%)

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G  PN V YN+ IH   + G++EGA  +L  M  K I PD                    
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPD-------------------- 242

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                          +Y+Y  LI+ +CK   L  A  L   M+  GL+P+ +TY TLIDG
Sbjct: 243 ---------------SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 287

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           YC  G++E A    + M K    P++  YN +++ L  +  +  A  +++  ++ G++ D
Sbjct: 288 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 347

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           AITYN LINGY   G    AF + +EM + GI    V Y  LI  L +    ++A +L +
Sbjct: 348 AITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 407

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            ++  G+ PD + +  ++     N + E    L  +M    V PD  T+N ++     E 
Sbjct: 408 KILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 467

Query: 653 SAED 656
             E+
Sbjct: 468 KVEE 471


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/545 (29%), Positives = 276/545 (50%), Gaps = 40/545 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    ++G  E A+++ +++KV+    +I  +N+ L+ L +   +    ++ +EM
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313

Query: 208 VSCGYVENVNTF-----------------------------------NLVIYALCKECKL 232
              G+V +  T+                                   ++++ ALCKE  +
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           E+A  +  + L++G+ P  V FN I+N  CQVGD+  A     KM  +    + PN VT+
Sbjct: 374 EKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG---LRPNHVTY 430

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++  FC++  +E AE+    M++ G+  NV TY TLIDGY R    +   ++ +EM K
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +GL PN + Y   I+ L  + ++  A  +L DM+ + + P+   Y++L  G C  G +K 
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKD 550

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF+  ++++   +V    +YNILIN LCK   +  A+ L S +  +GL  D+ITY +LI 
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GY   GN++ A+++YE MKK   KP L  Y+ +I G C    L   + + Q   ++ L+ 
Sbjct: 611 GYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVP 669

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D + YN LI+ Y  +G + +A ++ S M   GI  +K+ YN LI    K G   + + L+
Sbjct: 670 DRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLV 729

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M + G+IP   TY  L+    K    +     + +M  +G +P     + +I+ L  E
Sbjct: 730 NDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREE 789

Query: 652 KSAED 656
             + D
Sbjct: 790 GRSHD 794



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/537 (29%), Positives = 268/537 (49%), Gaps = 39/537 (7%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P   D L+  C++      + ++   +K  G   S+ + N FL  LV         +L+ 
Sbjct: 112 PLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFS 171

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E+V  G   +   +   I A  K   L+ A+ L   M + G+ P V  +N++I   C+  
Sbjct: 172 EIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEK 231

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            ++ A KLF +   M    V PN +T+N +I+G+CK+G++E A  IR  M    ++  + 
Sbjct: 232 RMKDAEKLFDE---MLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ +L++G  R    EEA R+ +EM   G +P+   Y +        G+V+ ++ +  + 
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM----------------VGD- 428
           + K +    +T SIL   LC+ G +++A ++  + LE  +                VGD 
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 429 --AY----------------SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             AY                +YN L+   C+  N+  A++ +  M+ +G++P++ TY TL
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDGY +    +   Q+ E M+K   KPN++ Y  +IN LCKDA++  A+ +L      G+
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + +A  YN LI+G  I GK+ +AF  F EM    I    V YNILIN LCK G   +A  
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAEN 588

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           L   +   G+  D +TY +L++ +S   + ++ +EL++ M  SG+ P   TY+ +I+
Sbjct: 589 LASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIA 645



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 277/579 (47%), Gaps = 59/579 (10%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           LV+ +R++D L L   ++ +  + P +F+ G        KA        ++A  ++G  +
Sbjct: 157 LVSTKRYEDTLQLFSEIVES-GLRPDQFMYG--------KA--------IQAAVKLGDLK 199

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A +++  +K  G S  +  +N  +  L K   +    KL+ EM+      N  T+N +I
Sbjct: 200 RAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLI 259

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV---- 279
              CK  +LEEA ++  RM    + P ++ FN ++N  C+   +E A ++  +M V    
Sbjct: 260 DGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFV 319

Query: 280 ------------------------MSGDSVLPN----SVTHNCIINGFCKLGRVEFAEEI 311
                                   +S ++V         T + ++N  CK G +E AEE+
Sbjct: 320 PDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEV 379

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
               ++ G+      + T+++GY + G   +A    ++M   GL PN+V YNS +     
Sbjct: 380 LKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCE 439

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
             ++E A   +  M++K + P+  TY+ L  G  R+    + F++  ++ ++ +  +  S
Sbjct: 440 MKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVIS 499

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  LIN LCK  N+  A+ +L  M+ RG++P+   Y  LIDG C  G ++ A + ++ M 
Sbjct: 500 YGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMV 559

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
             E  P LV YN +INGLCK   +  A++L     R GL  D ITYN+LI+GY   G + 
Sbjct: 560 AREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQ 619

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA----RELMKVMILHGIIPDYVTY 606
           +A  ++  M+  GI      Y+ LI      GC ++      ++ + M+   ++PD V Y
Sbjct: 620 KALELYETMKKSGIKPTLNTYHRLIA-----GCGKEGLVLVEKIYQEMLQMNLVPDRVIY 674

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             L+  + ++   ++   LH  M   G+ PD  TYN +I
Sbjct: 675 NALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLI 713



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 227/448 (50%), Gaps = 4/448 (0%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +LY  M   G + +V + NL + +L    + E+ L L+  +++SG+ P+   +   I  A
Sbjct: 133 ELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAA 192

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            ++GDL+ A++L   M  M    V P    +N +I G CK  R++ AE++   M+   + 
Sbjct: 193 VKLGDLKRAIEL---MTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVA 249

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TLIDGY + G  EEA  + + M    + P  + +NS ++ L     +E A  V
Sbjct: 250 PNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRV 309

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M      PD FTY+ L  G  + G V  +  L  + + + +    Y+ +IL+N LCK
Sbjct: 310 LEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCK 369

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             N+  A+++L   +  GL P  + + T+++GYC+ G+I  A    E M+ V  +PN V 
Sbjct: 370 EGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVT 429

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS++   C+  +++ A+  ++     G+L  + TYNTLI+GY  +      F +  EM 
Sbjct: 430 YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME 489

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  N + Y  LIN LCK     +A  ++  M+  G++P+   Y  L+         +
Sbjct: 490 KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLK 549

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +     D+MV   + P   TYN +I+ L
Sbjct: 550 DAFRFFDEMVAREIVPTLVTYNILINGL 577



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 160/308 (51%), Gaps = 1/308 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M K G++P+    N  +  L +    E  L + S++++  + PD F Y    +   + G 
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGD 197

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +K+A +L   +    +    + YN++I  LCK   +  A++L   M+ R + P+ ITY T
Sbjct: 198 LKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNT 257

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDGYCK G +E A  + E MK    +P ++ +NS++NGLC+   ++ A+ +L+  +  G
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
            + D  TY TL +G+   G +  +  +  E    G+ +     +IL+N LCK G  ++A 
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           E++K  + +G+ P  V + T+V  + +     +     + M   G+ P++ TYN+++   
Sbjct: 378 EVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKF 437

Query: 649 LGEKSAED 656
              K+ E+
Sbjct: 438 CEMKNMEE 445



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 46/108 (42%)

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           ++E+  ++  M+  G+  +    N+ +  L     Y+   +L   ++  G+ PD   Y  
Sbjct: 128 VSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGK 187

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +    K    +  IEL   M   GVSP    YN +I  L  EK  +D
Sbjct: 188 AIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 175/620 (28%), Positives = 306/620 (49%), Gaps = 70/620 (11%)

Query: 75  KLALEFYTWVGENNRFSHSLE--SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           +LAL+F+ W      FS SL+  +  +++ LL ++R F +  L++ N M A  + P    
Sbjct: 71  ELALKFFDW-ASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLEN-MKAQHLKP---- 124

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV-SIHAWNNFLSHL 191
                       T   F AL+ A  + G+ + A  +   ++   + + ++ A N+ L+ L
Sbjct: 125 ------------TREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGL 172

Query: 192 VKLNEIGRFWKLYKEMVSC----GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           VK  ++    +LY +M+      G V +  T ++V+  LC   K+EE   L       G 
Sbjct: 173 VKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGC 232

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+VV +NMII+  C+ GDL+ A +  +++  M G  VLP   T+  +INGFCK G  E 
Sbjct: 233 VPHVVFYNMIIDGYCKKGDLQCATRTLKELK-MKG--VLPTVETYGALINGFCKAGEFEA 289

Query: 308 AEEIRYAMIKAGIDCNVR-----------------------------------TYATLID 332
            +++   M   G++ NV+                                   TY T+I+
Sbjct: 290 VDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMIN 349

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD---VEGALFVLSDMIDKH 389
              +GG  +EA    ++  +RGL+PN   Y   +H    +GD     G LF ++++ +K 
Sbjct: 350 FSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEK- 408

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             PD  +Y     G+  +G +  A  +  +++E+ +  DA  YN+L++ LCK+    A K
Sbjct: 409 --PDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMK 466

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            LLS M+ R + PD+  + TL+DG+ + G ++ A+++++ + +    P +V YN++I G 
Sbjct: 467 LLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGF 526

Query: 510 CKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   +  A S L   + +    D  TY+T+I+GY     ++ A  MF +M       N 
Sbjct: 527 CKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNV 586

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           + Y  LIN  CK     +A ++ + M    ++P+ VTYTTLV  F K   PE+   + + 
Sbjct: 587 ITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFEL 646

Query: 629 MVLSGVSPDNQTYNAIISPL 648
           M+++G  P++ T++ +I+ L
Sbjct: 647 MLMNGCPPNDATFHYLINGL 666



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 254/526 (48%), Gaps = 30/526 (5%)

Query: 59  TNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSL---ESSCAIVHLLVNWRRFDDA 113
           +NSL+N +V    KS K+  AL+ Y  + + +  + ++    ++  +V  L N  + ++ 
Sbjct: 165 SNSLLNGLV----KSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEG 220

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
             L+ +      V  + F   ++D Y  CK                G  + A   +++LK
Sbjct: 221 RRLVKDRWGKGCVPHVVFYNMIIDGY--CKK---------------GDLQCATRTLKELK 263

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           +KG   ++  +   ++   K  E     +L  EM + G   NV  FN VI A  K   + 
Sbjct: 264 MKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVT 323

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +A     RM + G  P++  +N +IN +C+ G ++ A +   K        +LPN  ++ 
Sbjct: 324 KAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKA---KERGLLPNKFSYT 380

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +++ +CK G    A  + + + + G   ++ +Y   I G    G  + AL + ++M+++
Sbjct: 381 PLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEK 440

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P+  +YN  +  L   G       +LS+M+D+++ PD + ++ L  G  RNG + +A
Sbjct: 441 GVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEA 500

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            K+   ++ + +      YN +I   CK   +  A   L+ M      PD  TY T+IDG
Sbjct: 501 IKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDG 560

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y K  ++  A++++  M K + KPN++ Y S+ING CK A +  A+ + +  +   L+ +
Sbjct: 561 YVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPN 620

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +TY TL+ G+F  GK  +A ++F  M   G   N   ++ LIN L
Sbjct: 621 VVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL 666



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 224/469 (47%), Gaps = 35/469 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN---NFLSHLVKLNEIGRFWKLY 204
           VF+ ++ A  + G    A + ++++   G    I  +N   NF     ++ E   F +  
Sbjct: 308 VFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKA 367

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           KE    G + N  ++  +++A CK+    +A  + +R+ + G  P++V +   I+     
Sbjct: 368 KER---GLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVH 424

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+++ AL +  KM       V P++  +N +++G CK GR    + +   M+   +  +V
Sbjct: 425 GEIDVALMVREKM---MEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDV 481

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             +ATL+DG+ R G  +EA+++   ++++G+ P  V YN+ I      G +  AL  L+ 
Sbjct: 482 YVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNK 541

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M + H  PD +TYS +  G  +   +  A K+  Q+++     +  +Y  LIN  CK  +
Sbjct: 542 MKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKAD 601

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+++   M    L+P+++TY TL+ G+ K G  E A  ++E M      PN   ++ 
Sbjct: 602 MIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHY 661

Query: 505 IINGLCKDAS---LDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +INGL   A+   L   K  ++ ++R  +LD  T                   M SE  +
Sbjct: 662 LINGLTNTATSPVLIEEKDSME-NERSLILDFFTM------------------MLSEGWD 702

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             IA     YN +I  LCK G    A+ L+  M+  G + D V +T ++
Sbjct: 703 QVIA----AYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAML 747



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 173/416 (41%), Gaps = 42/416 (10%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +V D E ALK F           L + V H+ ++            E +   M    +  
Sbjct: 66  RVHDAELALKFFDWASTRPFSCSL-DGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKP 124

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
               ++ LI  Y   GS + AL+L   + +    +P  V  NS ++ L   G V+ AL +
Sbjct: 125 TREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQL 184

Query: 382 LSDMIDKH----ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
              M+          D++T SI+ KGLC  G +++  +L      +  V     YN++I+
Sbjct: 185 YDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIID 244

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA-------------- 483
             CK  +L  A + L  + ++G++P + TYG LI+G+CK G  E                
Sbjct: 245 GYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNM 304

Query: 484 -VQVYENMKKVEKK--------------------PNLVIYNSIINGLCKDASLDAAKSLL 522
            V+V+ N+   E K                    P++  YN++IN  CK   +  A   L
Sbjct: 305 NVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFL 364

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           + ++  GLL +  +Y  L++ Y   G   +A  M   +  +G   + V Y   I+ +   
Sbjct: 365 EKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVH 424

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           G    A  + + M+  G+ PD   Y  L++   KN     +  L  +M+   V PD
Sbjct: 425 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPD 480



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 146/326 (44%), Gaps = 21/326 (6%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           ++ +   +   ++  E+    K++K ++  G    +  +N +I   CK  K+ +ALS   
Sbjct: 481 VYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 540

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           +M      P+   ++ +I+   +  D+  ALK+F   G M      PN +T+  +INGFC
Sbjct: 541 KMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMF---GQMMKHKFKPNVITYTSLINGFC 597

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K   +  AE++   M    +  NV TY TL+ G+ + G  E+A  + + M+  G  PN+ 
Sbjct: 598 KKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDA 657

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMID--KHICPDHFTYSILTKG--------------L 404
            ++  I+ L         L    D ++  + +  D FT  +L++G              L
Sbjct: 658 TFHYLINGL-TNTATSPVLIEEKDSMENERSLILDFFTM-MLSEGWDQVIAAYNSVIVCL 715

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C++G V  A  L  ++L +  + D+  +  +++ LC        + ++S  + +  +   
Sbjct: 716 CKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTA 775

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENM 490
           + Y   +D Y   G +  A  + + +
Sbjct: 776 VKYSLTLDKYLYQGRLSEASVILQTL 801



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 130/328 (39%), Gaps = 52/328 (15%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+    + G  + A  + + +  KG    I  +N  +    K  ++        +M
Sbjct: 483 VFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKM 542

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            +  +  +  T++ VI    K+  +  AL ++ +M+K    PNV+ +  +IN  C+  D+
Sbjct: 543 KNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADM 602

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A K+FR  G+ S D ++PN VT+  ++ GF K G+ E A  I   M+  G   N  T+
Sbjct: 603 IRAEKVFR--GMKSFD-LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATF 659

Query: 328 ATLIDGYARGGSS----------------------------------------------- 340
             LI+G     +S                                               
Sbjct: 660 HYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHG 719

Query: 341 --EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             + A  L  +M+ +G + ++V + + +H L  +G  +    ++S  ++K        YS
Sbjct: 720 MVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYS 779

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +        G + +A  +   ++EE  V
Sbjct: 780 LTLDKYLYQGRLSEASVILQTLIEEDRV 807


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 186/607 (30%), Positives = 302/607 (49%), Gaps = 39/607 (6%)

Query: 57  SLT-NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           SLT +SL+  V++   +SP  ALEF+    E N   +S     AI+H+LV  +    A  
Sbjct: 27  SLTPDSLITTVLN--CRSPWKALEFFNAAPEKNIQLYS-----AIIHVLVGSKLLSHARY 79

Query: 116 LMGNLMS--ANSVSP-----LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           L+ +L+     S  P     L F E  L   +  K TP V+  L+    ++   E A  +
Sbjct: 80  LLNDLVQNLVKSHKPYHACQLAFSE--LSRLKSSKFTPNVYGELIIVLCKMELVEEALSM 137

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
             K+   G +++I A N  L  LVK       W++Y+EM+S G   +V TF  +I   C+
Sbjct: 138 YHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCR 194

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           +  L  A  ++  M   GI P V+ + ++I   C    +E A  + R M  +    V PN
Sbjct: 195 QGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVG---VYPN 251

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T+N +++G+CKL   + A  +   M+  G+  +V T+  LIDG  + G  + A  L  
Sbjct: 252 VYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFV 311

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M+K  + PN  VYNS I      GDV  A+ +  ++    + PD FTYSIL +GLC   
Sbjct: 312 NMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVS 371

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
             ++A  +  ++ +E ++ ++ +YN LI+  CK   +  A ++ S M   G+ P++IT+ 
Sbjct: 372 RTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFS 431

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDGYCK  N++ A+ +Y  M      P++V Y ++I+G CK  S+  A  L       
Sbjct: 432 TLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDN 491

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMR-------NVGIA------VNKVGYNIL 574
           G+  +  T + L++G   +GKI++A  +F+E         NV          N V Y  L
Sbjct: 492 GITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTAL 551

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I+ LC+ G + +A +L   M  +G+ PD V Y  ++    +      ++ LH DM+  GV
Sbjct: 552 IHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQ--VKYILMMLHADMLKFGV 609

Query: 635 SPDNQTY 641
            P++  +
Sbjct: 610 IPNSAVH 616



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 225/428 (52%), Gaps = 11/428 (2%)

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
           C+L  A S   R+  S   PNV  +  +I   C++  +E AL ++ K+G           
Sbjct: 98  CQL--AFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKVGAALTIQAC--- 150

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
              N ++    K GR E    I   MI  G+  +V T+ TLIDG  R G    A  + DE
Sbjct: 151 ---NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDE 207

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M  +G++P  +VY   I  L ++  +E A  +   M +  + P+ +TY+ L  G C+   
Sbjct: 208 MRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLAN 267

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            KQA +L+  +L E +V D  ++ ILI+ LCK   + AA+ L  +MI   + P+I  Y +
Sbjct: 268 AKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNS 327

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LID YCK G++  A+ ++  +++ E  P++  Y+ +I GLC  +  + A ++ +   + G
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +L +++TYN+LI+G    GK+ +A  + S+M   G+  N + ++ LI+  CK    Q A 
Sbjct: 388 ILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAM 447

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +   M++  + PD VTYT ++    K  S +E ++L+ DM+ +G++P+  T + ++  L
Sbjct: 448 GIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGL 507

Query: 649 LGEKSAED 656
             +    D
Sbjct: 508 CKDGKISD 515


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 188/701 (26%), Positives = 316/701 (45%), Gaps = 117/701 (16%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN--SVSPLE 130
           +PK AL F+ +V E  +F  +  S C ++HLLV       A LL+  L+     +     
Sbjct: 99  NPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAFYARN 158

Query: 131 FLEGLLDSYEICKATPAVFDALVRA-----CTQIGATEG-------AYDVIQKLKVKGHS 178
           F     +  +I      VF+ ++          + +T+        A DV   L  KG  
Sbjct: 159 FESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLF 218

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
            S+      LS LVK NE+ + +++Y  +   G + +V+ F+ +I A CK  + ++A+ L
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------------------- 277
           + +M K G+ PNVV +N II+  C+ G L+ A +   KM                     
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338

Query: 278 -----------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
                        MS    +PN V +N +I+G+CK+G +  A +IR  M+  GI  N  T
Sbjct: 339 LEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
             +LI G+ +     +A  + +EM+ RGL  N   ++  I+WL  +     AL  + +M+
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            +++ P+    + L  GLC+ G   +A +L  ++L +  V +  + N LI+ LCK+ N+ 
Sbjct: 459 LRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQ 518

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              +LL  M+ RGL+ D ITY TLI G CK G ++   ++ E M K   +P++  +N ++
Sbjct: 519 ETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLL 578

Query: 507 NGLCKDASLDAAKSLLQASQRIGL------------------------------------ 530
           +GLC    +D A  L    ++ G                                     
Sbjct: 579 HGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLE 638

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           L+++ YN+LI  Y ING +  AF +  +M++ G+ ++   Y+ L++ LC  G    A+ L
Sbjct: 639 LNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHL 698

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSK-----------------NCSP-------------- 619
           +  M   G++P+ V YTT++  +SK                 N  P              
Sbjct: 699 LDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCK 758

Query: 620 ----EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               +E  +L ++M   G+ PD  TYNA  + L  E   E+
Sbjct: 759 LGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEE 799



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 269/559 (48%), Gaps = 35/559 (6%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GL    E     P V  ++ ++    + G  + AY   +K+  +  S S+  ++ F++ L
Sbjct: 277 GLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGL 336

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           +KL +I     + KEM   G+V N   +N +I   CK   + EAL +   ML  GI PN 
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396

Query: 252 VCFNMIINEAC---QVGDLEFALK--LFRKMGVMSGD----------------------- 283
           V  N +I   C   Q+G  E  L+  + R + +  G                        
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIRE 456

Query: 284 ----SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
               ++ PN      +++G CK G+   A E+   ++  G   N+ T   LI G  + G+
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +E L+L  +M++RGL+ + + YN+ I     EG V+    +  +M+ K I PD +T+++
Sbjct: 517 MQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNL 576

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC    + +A +L ++  +   V + Y+Y ++I+  CK+N +   + LL+ ++ + 
Sbjct: 577 LLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKK 636

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L  + + Y +LI  YC  GN+  A ++ ++MK      +   Y+S+++GLC    +D AK
Sbjct: 637 LELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAK 696

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL   ++ GLL + + Y T+I GY   G++ +   +  EM +  I  NK  Y I+I+  
Sbjct: 697 HLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGF 756

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G  ++A +L+  M   GI+PD VTY        K    EE  ++ D+M    V  D 
Sbjct: 757 CKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDE 816

Query: 639 QTYNAIISPLLGEKSAEDQ 657
            TY  +I       +A +Q
Sbjct: 817 ITYTTLIDGCHQPSTATNQ 835


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 163/533 (30%), Positives = 267/533 (50%), Gaps = 11/533 (2%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATP----AVFDALVRACTQIGATEGAYDVIQKLK 173
           G  +S NS+S     + L   Y + +  P      F   + +  +         +  ++ 
Sbjct: 63  GGFLSNNSIS---IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMD 119

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           + G + ++++ N  ++ L +LN +     +  +M   G   +  TFN +I   C E +++
Sbjct: 120 LFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIK 179

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA+ L+  M++ G  P+V+ ++ +IN  C+ G+   AL+L RKM         PN V + 
Sbjct: 180 EAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM---EEKGCKPNLVAYT 236

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            II+  CK   V  A ++   M+  GI  +V TY+T++ G+   G   EA  L +EMV R
Sbjct: 237 TIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
            +MPN V +   +  L  EG V  A  V   M  K   P+ +TY+ L  G C N  + +A
Sbjct: 297 NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEA 356

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            K+ + ++++      +SYNILIN  CK   L  AK LL  M  + L PD +TY TL+ G
Sbjct: 357 QKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQG 416

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
            C+ G  + A+ +++ M      P+L+ Y+++++GLCK   LD A  LL++ Q   +  D
Sbjct: 417 LCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPD 476

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            + YN LI G FI GK+  A  +FS++   GI      Y I+I  L K G   +A EL +
Sbjct: 477 IVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFR 536

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            M   G +P+  +Y  ++  F +N      I L D+MV    S D+ T+  ++
Sbjct: 537 KMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 249/480 (51%), Gaps = 4/480 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +  FL  + K  +      L  +M   G   NV + N++I  LC+   +  A+S+ 
Sbjct: 91  SVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVL 150

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M K GI P+ + FN +IN  C  G+++ A+ LF +M V  G    P+ ++++ +ING 
Sbjct: 151 GKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM-VRRGHQ--PDVISYSTVINGL 207

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G    A ++   M + G   N+  Y T+ID   +     +A+ L  EMV RG+ P+ 
Sbjct: 208 CKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDV 267

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V Y++ +H   + G +  A  + ++M+ +++ P+  T++IL  GLC+ G V +A  +   
Sbjct: 268 VTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEA 327

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + ++    +AY+YN L++  C +N +  A+++L  M+ +G  P + +Y  LI+GYCK   
Sbjct: 328 MTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR 387

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A  +   M + E  P+ V Y++++ GLC+      A +L +     GLL D +TY+T
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G   +G + EA  +   M+   I  + V YNILI  +   G  + A+EL   +   G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           I P   TYT ++    K    +E  EL   M   G  P++ +YN II   L  + +   +
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAI 567



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 216/431 (50%), Gaps = 4/431 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+      G  + A  +  ++  +GH   + +++  ++ L K        +L ++M
Sbjct: 164 TFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N+  +  +I +LCK+  + +A+ L   M+  GI P+VV ++ I++  C +G L
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  LF +M    G +V+PN+VT   +++G CK G V  A  +  AM K G + N  TY
Sbjct: 284 NEATILFNEM---VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTY 340

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+DGY      +EA ++ D MV +G  P    YN  I+       ++ A  +L +M +
Sbjct: 341 NALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSE 400

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + PD  TYS L +GLC+ G  ++A  L  ++    ++ D  +Y+ L++ LCK  +L  
Sbjct: 401 KELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDE 460

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL SM    + PDI+ Y  LI+G    G +E A +++  +     +P +  Y  +I 
Sbjct: 461 ALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIK 520

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL K+   D A  L +  +  G L ++ +YN +I G+  N   + A  +  EM     + 
Sbjct: 521 GLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSA 580

Query: 567 NKVGYNILINF 577
           +   + +L++ 
Sbjct: 581 DSSTFQMLLDL 591



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 174/372 (46%), Gaps = 36/372 (9%)

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
           Y M++     +V  +   +   A+       + LC++M   G+  N    N  I+ L   
Sbjct: 81  YRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRL 140

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             V  A+ VL  M    I PD  T++ L  G C  G +K+A  L N+++      D  SY
Sbjct: 141 NHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISY 200

Query: 433 NILINYLCKSNNLAAAKQ-----------------------------------LLSSMIV 457
           + +IN LCKS N + A Q                                   LLS M+ 
Sbjct: 201 STVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVD 260

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RG+ PD++TY T++ G+C  G++  A  ++  M      PN V +  +++GLCK+  +  
Sbjct: 261 RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+ + +A  + G   +A TYN L++GY +N ++ EA  +   M + G A     YNILIN
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             CK     +A+ L+  M    + PD VTY+TL+    +   P+E + L  +M  SG+ P
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440

Query: 637 DNQTYNAIISPL 648
           D  TY+ ++  L
Sbjct: 441 DLMTYSTLLDGL 452


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 166/596 (27%), Positives = 287/596 (48%), Gaps = 43/596 (7%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           LE++AP L++ +VN V+ E R+ P+L   F+ W      F  S  +   ++ +L     F
Sbjct: 55  LEKLAPFLSSEIVNDVMREQRR-PELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGF 112

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           D    ++  L ++N   P                 P  F  L+ A  + G  E A +   
Sbjct: 113 DTYWKILEELKNSNIQIP-----------------PPTFSVLIAAYAKSGMAEKAVESFG 155

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K+K  G    +  +N+ L  +V+         +Y +M+   Y  N  TF +++  LCK  
Sbjct: 156 KMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNG 215

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K ++AL ++  M + GI PN + + +I++  CQ    +   +L   M V SG    P+S+
Sbjct: 216 KTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV-SG--CCPDSI 272

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +++GFCKLG+++ A  +     K G    ++ Y++LIDG  R    +E    C +M
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM 332

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            K G+ P+ V+Y   I      G V+ AL +L+DM  + + PD + Y+ L KG C  G +
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  L  ++ +      + +Y ILI  +C++  L  A+Q+ + M   G  P I+T+  L
Sbjct: 393 DKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDG CK G +E A  ++  M ++ K P+L +                   L Q + R+  
Sbjct: 453 IDGLCKAGELEEARHLFYKM-EIGKNPSLFL------------------RLSQGADRV-- 491

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           +D  +  T++     +G I +A+ +  ++ + G+  + + YN+LIN  CK      A +L
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKL 551

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + + L G  PD VTY TL+  F +    E+   + D MV +G +P +  Y  +++
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMT 607



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 244/559 (43%), Gaps = 55/559 (9%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  ++    Q   T+  + ++  +KV G        N  L    KL +I   + L +  
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLF 297

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              GYV  +  ++ +I  L +  + +E      +M K+GI P+VV + ++I   C+VG +
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           ++AL +   M   +   + P++  +N +I GFC +G ++ A  ++  + K        TY
Sbjct: 358 DYALNMLNDM---TQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTY 414

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--------- 378
             LI G  R G  +EA ++ ++M   G  P+ + +N+ I  L   G++E A         
Sbjct: 415 TILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI 474

Query: 379 -----LFV-LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
                LF+ LS   D+ +  D  +   + + LC +G + +A+KL  Q+ +  +V D  +Y
Sbjct: 475 GKNPSLFLRLSQGADRVM--DTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTY 532

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N+LIN  CK+ N+  A +L   + ++G  PD +TYGTLIDG+ +    E A +V + M K
Sbjct: 533 NVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK 592

Query: 493 VEKKPNLVIYNSIINGLCKDASLD-----------------------------------A 517
               P+  +Y  ++   C+   L                                    A
Sbjct: 593 NGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKA 652

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            + LL+ + ++   +   Y   + G     +  EA  +F  ++   + VN     +LIN 
Sbjct: 653 VRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLING 712

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G  + A ++    +  G +        L+         +  ++L + M  +G   D
Sbjct: 713 LCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLD 772

Query: 638 NQTYNAIISPLLGEKSAED 656
              ++ I S LL    A++
Sbjct: 773 EYLHHRIKSYLLSVWKAQE 791



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 175/360 (48%), Gaps = 1/360 (0%)

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VTHN +I+   K    +   +I   +  + I     T++ LI  YA+ G +E+A+    +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M   G  P+   YNS +H +  +     AL V + M+  +  P+  T+ IL  GLC+NG 
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
              A K+ +++ ++ +  +   Y I+++ LC++       +LL++M V G  PD IT   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+DG+CK G I+ A  + +  +K      +  Y+S+I+GL +    D  +   +   + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D + Y  LI G+   G +  A  M ++M   G++ +   YN LI   C  G   +AR
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   +  +   P   TYT L+    +N   +E  ++ + M   G SP   T+NA+I  L
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 110/271 (40%), Gaps = 33/271 (12%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A    +V    + G    AY ++ +L   G    I  +N  ++   K   I   +KL++E
Sbjct: 495 ASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRE 554

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +   G+  +  T+  +I    +  + E+A  +  +M+K+G  P+   +  ++  +C+ G 
Sbjct: 555 LQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGK 614

Query: 267 LEFA----LKLFRKMGVMSGDSVLPNSVTH----------NCIIN--------------- 297
           L  A    LK  R +     D  L  +  H           C++                
Sbjct: 615 LSVAFSLWLKYLRSLPSQE-DETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTI 673

Query: 298 ---GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
              G C+  R E A +I   + +  +D N  +   LI+G  + G+ E A+ +    +++G
Sbjct: 674 WLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKG 733

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            M    + N  +  L  +  ++ AL +L+ M
Sbjct: 734 FMLMPRICNQLLRSLILQDKMKHALDLLNRM 764


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/450 (33%), Positives = 245/450 (54%), Gaps = 11/450 (2%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EM+      +V TFN V++ALC++  + E+ +L  ++LK G+  N    N+ I   C
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC 257

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G LE A+ L  +MG      V P+ VT+N ++ G CK  +V+ A +    M+  G   
Sbjct: 258 EDGRLEEAVALVERMGAY----VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP 313

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY T+IDGY + G  +EA  L  + V +G +P+ V Y S I+ L AEGD+E AL + 
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++   K + PD   Y+ L KGLCR G +  A ++ N+++EE    D ++YNI+IN LCK 
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKM 433

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N++ A  +++  IV+G +PD+ T+ TLIDGYCK   ++ A+Q+ E M      P+++ Y
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL----LDAITYNTLINGYFINGKIAEAFAMFSE 558
           NS++NGLCK      AK + +  + + L     +AITYN LI  +    ++ EA  +   
Sbjct: 494 NSVLNGLCKAGK---AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G+  + V +N LI+  C+ G    A  L + +   G      T+  L+  +S   +
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 610

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +   ++  +M+  G  PD  TY  ++  L
Sbjct: 611 MQMAEKIFGEMISKGYKPDLYTYRILVDGL 640



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 236/478 (49%), Gaps = 22/478 (4%)

Query: 197 IGRFWKLYKEMVSCGYVENVNT-----------------FNLVIYALCKECKLEEALSLY 239
           I  +  L +E+VS G +++V+                  +   I A  +  +L  A+  +
Sbjct: 35  IPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAF 94

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            RM      P    +N I++        + A K++ +M + +G  V P++ TH   +  F
Sbjct: 95  ERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRM-LAAG--VAPDARTHTVRLKSF 151

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C  GR   A  +  ++ + G D     Y T++ G    G    A  L DEM+ R + P+ 
Sbjct: 152 CLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDV 211

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             +N+ +H L  +GDV  +  +L+ ++ + +  + FT +I  +GLC +G +++A  L  +
Sbjct: 212 ATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVER 271

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
            +  ++  D  +YN L+  LCK + +  A Q L  M+ +G IPD  TY T+IDGYCK G 
Sbjct: 272 -MGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGM 330

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A ++ ++       P+ V Y S+INGLC +  ++ A  L   +Q   L  D + YN+
Sbjct: 331 LQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNS 390

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L+ G    G I  A  + +EM   G   +   YNI+IN LCK G    A  +M   I+ G
Sbjct: 391 LVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKG 450

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +PD  T+ TL+  + K    +  ++L + M   G++PD  TYN++++ L     A++
Sbjct: 451 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKE 508



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 4/418 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+R   +    + A   + ++  +G       +N  +    K   +    +L K+ 
Sbjct: 282 TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDA 341

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+V +  T+  +I  LC E  +E AL L+       + P++V +N ++   C+ G +
Sbjct: 342 VFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLI 401

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL++   M  M  +   P+  T+N IING CK+G +  A  +    I  G   +V T+
Sbjct: 402 LHALQV---MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDGY +    + AL+L + M   G+ P+ + YNS ++ L   G  +       +MI 
Sbjct: 459 NTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMIL 518

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  TY+IL +  C+   +++A  +  ++ ++ +V DA S+N LI+  C++ +L  
Sbjct: 519 KGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDG 578

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   +  +G      T+  LI  Y    N++ A +++  M     KP+L  Y  +++
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVD 638

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           GLCK A++D A + L      G + ++ T+  ++N   +N +++EA A+   M  +G+
Sbjct: 639 GLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGV 696



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 193/396 (48%), Gaps = 11/396 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++    + G  + A ++++    KG       + + ++ L    +I R  +L+ E 
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            +     ++  +N ++  LC++  +  AL +   M++ G  P++  +N+IIN  C++G++
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436

Query: 268 EFALKLFRKMGVMSGDSV----LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
             A        V+  D++    LP+  T N +I+G+CK  +++ A ++   M   GI  +
Sbjct: 437 SDA-------AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD 489

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY ++++G  + G ++E     +EM+ +G  PN + YN  I        +E A  V+ 
Sbjct: 490 VITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIV 549

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M    + PD  +++ L  G CRNG +  A+ L  ++ E+     A ++NILI       
Sbjct: 550 RMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKL 609

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N+  A+++   MI +G  PD+ TY  L+DG CK  N++ A      M      P++  + 
Sbjct: 610 NMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFG 669

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
            ++N L  +  +  A +++    R+G++  +    L
Sbjct: 670 RMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTIL 705



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 192/402 (47%), Gaps = 12/402 (2%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E A ++  + + K     +  +N+ +  L +   I    ++  EMV  G   ++ T+
Sbjct: 364 GDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTY 423

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I  LCK   + +A  +    +  G  P+V  FN +I+  C+   L+ AL+L  +M  
Sbjct: 424 NIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWT 483

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                + P+ +T+N ++NG CK G+ +   E    MI  G   N  TY  LI+ + +   
Sbjct: 484 YG---IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            EEA  +   M + GL+P+ V +N+ IH     GD++GA  +   + +K       T++I
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L         ++ A K+  +++ +    D Y+Y IL++ LCK+ N+  A   L+ MI +G
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKG 660

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +P + T+G +++       +  AV +   M ++   P +V  ++I++   K+  + A K
Sbjct: 661 FVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTDKKE--IAAPK 716

Query: 520 SLLQASQRIGLLDAITYNTLINGYFIN-----GKIAEAFAMF 556
            L++   + G +    Y  L  G   N      + A+A  MF
Sbjct: 717 ILVEELMKKGHISYRAYEVLHEGVRDNKLTRKARKADASIMF 758



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 4/231 (1%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT--YGTLIDGYCKGGNIEGAVQVYE 488
           +Y  LI  L  +  L      L+S     L PD +   Y   I  Y + G +  AV  +E
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M      P    YN+I++ L   A  D A  +       G+  DA T+   +  + + G
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +   A  +   +   G       Y  ++  L   G    AR L   M+   + PD  T+ 
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            ++    +     E   L   ++  G+S +  T N  I  L  +   E+ V
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV 266



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/109 (23%), Positives = 55/109 (50%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           AT   F+ L+ A +     + A  +  ++  KG+   ++ +   +  L K   + R +  
Sbjct: 593 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAH 652

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
             EM+S G+V ++ TF  ++  L    ++ EA+++ + M++ G+ P VV
Sbjct: 653 LAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 188/677 (27%), Positives = 307/677 (45%), Gaps = 83/677 (12%)

Query: 43  LRQRKW---KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCA 99
           ++Q  W   KI+     +L    V++++   R+ PKLAL+F+ W G    F H+ ES C 
Sbjct: 109 IQQDLWNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCI 168

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEF-----LEGLLDSYEICKATPAVFDALVR 154
           IVHL+   R + DA   +  ++  NS   + F      + L  +  IC +   VFD L  
Sbjct: 169 IVHLVFRARMYTDAHDTVKEVI-MNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFS 227

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
              ++G  E A +   +++         + N  L  L K        K + +M+  G   
Sbjct: 228 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAP 287

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V T+N++I  LCKE  LE +  L+ +M + G+ P+VV +N +I+   +VG LE    LF
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M  +     +P+ +T+N +IN +CK  ++  A E    M   G+  NV TY+TLID +
Sbjct: 348 NEMKDVG---CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAF 404

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  + A++L  +M + GL+PN   Y S I      G++  A  +L+DM+   +  + 
Sbjct: 405 CKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNI 464

Query: 395 FTYSILTKGLCRNGCV-----------------------------------KQAFKLHNQ 419
            TY+ L  GLC+ G +                                   + A K+  Q
Sbjct: 465 VTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQ 524

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD---------------- 463
           + E ++  D   Y  +I   C    L   K +L  M  RG+  +                
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584

Query: 464 -------------------IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
                              I+TY  LIDG CK G +E AV  +  M  +  +PN+ +Y S
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTS 644

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+GLCK+  +++AK L    Q  G+   IT +  LI+G   +G + EA  + S M  + 
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I  +   Y  L++   + G   QAR+    MI  GI+P+ V    L+  + K    +E I
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764

Query: 624 ELHDDMVLSGVSPDNQT 640
           EL ++M   G+  ++ T
Sbjct: 765 ELKNEMERMGLITESAT 781



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 223/469 (47%), Gaps = 39/469 (8%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V     F+++     +   LEEA   + RM      P     N +++   + G+ +   K
Sbjct: 216 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 275

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
            F  M    G  + P+  T+N +I+  CK G +E +  +   M + G+  +V TY +LID
Sbjct: 276 FFNDM---IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 332

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GY + GS EE   L +EM   G +P+ + YN  I+       +  A    S+M +  + P
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 392

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  TYS L    C+ G ++ A KL   +    ++ + ++Y  LI+  CK+ NL  A +LL
Sbjct: 393 NVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 452

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGG---------------------------------- 478
           + M+  G+  +I+TY  L+DG CK G                                  
Sbjct: 453 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 512

Query: 479 -NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
             +E A+++ + M +   KP+L++Y SII G C    L+  K +L+  +  G+  + +  
Sbjct: 513 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 572

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            T+I+ YF  GK ++A   F EM++VG+    V Y +LI+ LCK G  + A +    M+ 
Sbjct: 573 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            G+ P+   YT+L+    KN   E   +L D+M   G++PD   + A+I
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALI 681



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 145/285 (50%), Gaps = 1/285 (0%)

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G +E A    S M +    P   + + L   L ++G  +   K  N ++   +    ++Y
Sbjct: 233 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 292

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N++I+YLCK  +L  +++L   M   GL PD++TY +LIDGY K G++E    ++  MK 
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 352

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
           V   P+++ YN +IN  CK   +  A       +  GL  + +TY+TLI+ +   G +  
Sbjct: 353 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 412

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +F +MR  G+  N+  Y  LI+  CK G   +A +L+  M+  G+  + VTYT L+ 
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 472

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              K     E  E+   M+  G+SP+ Q Y A++   +  +  ED
Sbjct: 473 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 267/504 (52%), Gaps = 6/504 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           + + +++   + G    A  +I+++  K  S  I ++N  ++ L K  ++     L  EM
Sbjct: 146 IMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 205

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G   N  T   ++  LCK+ +++EA+ L   M K G   +VV +  +I+  C  G+L
Sbjct: 206 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 265

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +   +LF +M    G  +  N VT++C+++G C+LG+ + A  +  AM + GI  +V TY
Sbjct: 266 DRGKELFDEM---LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LIDG  + G +  A+ L + MV++G  P+NV YN  +  L  EG V  A  +L  MI+
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH--MVGDAYSYNILINYLCKSNNL 445
           K    D  TY+ L KGLC  G V +A KL N + +    +  + +++N+LI  LCK   L
Sbjct: 383 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 442

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A ++   M+ +G   +++TY  L+ G  K G I+ A+++++ +  +   PN   Y+ +
Sbjct: 443 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 502

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+G CK   L+ AK L    +  GL  A+  YNTL+      G + +A ++F EM N   
Sbjct: 503 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             + + +N +I+   K G +Q  +EL   M+  G+ PD +T++TL+ R SK    +E   
Sbjct: 563 EPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKS 622

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
             + MV SG +PD   Y++++  L
Sbjct: 623 ALERMVASGFTPDALVYDSLLKGL 646



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/442 (32%), Positives = 230/442 (52%), Gaps = 6/442 (1%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G+  NV   N+V+  LC+   + EA+ L   M +  + P++V +N +IN  C+   L+ A
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEA 198

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           + L  +M         PNSVT   +++G CK GR++ A E+  AM K G D +V  Y TL
Sbjct: 199 VGLLLEM---EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I G+   G+ +    L DEM+ +G+  N V Y+  +H L   G  + A  VL+ M +  I
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  TY+ L  GLC++G    A  L N ++E+       +YN+L++ LCK   +  A +
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 375

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIING 508
           +L  MI +G   D++TY TL+ G C  G ++ A++++ +M   E   +PN+  +N +I G
Sbjct: 376 ILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG 435

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK+  L  A  + +   + G   + +TYN L+ G    GKI EA  ++ ++ ++G   N
Sbjct: 436 LCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPN 495

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              Y+ILI+  CK      A+ L   M  HG+ P    Y TL+    K  S E+   L  
Sbjct: 496 SFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQ 555

Query: 628 DMVLSGVSPDNQTYNAIISPLL 649
           +M  +   PD  ++N +I   L
Sbjct: 556 EMGNANCEPDIISFNTMIDGTL 577



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 238/469 (50%), Gaps = 6/469 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A ++++ +K KG    +  +   +S       + R  +L+ EM+  G   NV T+
Sbjct: 228 GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTY 287

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           + +++ LC+  + +EA ++   M + GI P+VV +  +I+  C+ G    A+ L   M V
Sbjct: 288 SCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM-V 346

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
             G+   P++VT+N +++G CK G V  A +I   MI+ G   +V TY TL+ G    G 
Sbjct: 347 EKGEE--PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 404

Query: 340 SEEALRLCDEMV--KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            +EAL+L + M   +  L PN   +N  I  L  EG +  A+ +   M+ K  C +  TY
Sbjct: 405 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 464

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           ++L  G  + G +K+A +L  QVL+   V ++++Y+ILI+  CK   L  AK L   M  
Sbjct: 465 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 524

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL P +  Y TL+   CK G++E A  +++ M     +P+++ +N++I+G  K      
Sbjct: 525 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 584

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            K L      +GL  DA+T++TLIN     G++ EA +    M   G   + + Y+ L+ 
Sbjct: 585 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 644

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            L   G   +   L+  M   G + D    +T++T    +    +V+EL
Sbjct: 645 GLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 693



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 230/477 (48%), Gaps = 7/477 (1%)

Query: 183 AWNNFL-SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           A  NFL   L +    G  + +Y+ M     + +  + + +I       K +    +   
Sbjct: 75  ATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGL 134

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           +LK G   NV   N+++   C+ G +  A+ L R+MG     SV P+ V++N +ING CK
Sbjct: 135 VLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR---KSVSPDIVSYNTLINGLCK 191

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
             +++ A  +   M  AG   N  T  TL+DG  + G  +EA+ L + M K+G   + V+
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 251

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y + I      G+++    +  +M+ K I  +  TYS L  GLCR G  K+A  + N + 
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +  D  +Y  LI+ LCK      A  LL+ M+ +G  P  +TY  L+ G CK G + 
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 371

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA---SQRIGLLDAITYNT 538
            A ++   M +  KK ++V YN+++ GLC    +D A  L  +   ++     +  T+N 
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI G    G++ +A  +  +M   G   N V YN+L+    K G  ++A EL K ++  G
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +P+  TY+ L+  F K         L  +M   G++P    YN +++ L  E S E
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 548



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 222/466 (47%), Gaps = 37/466 (7%)

Query: 217 NTFNLVIYALCKE--CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N     + +LC++   +  EA+SL++  L   + P+    N +++   +  +   A  ++
Sbjct: 38  NDLETQLRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVY 97

Query: 275 RKM---------GVMS------GDSVLP-----------------NSVTHNCIINGFCKL 302
           R+M         G +S       D+  P                 N    N ++ G C+ 
Sbjct: 98  RRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRN 157

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G V  A  +   M +  +  ++ +Y TLI+G  +    +EA+ L  EM   G  PN+V  
Sbjct: 158 GGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC 217

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            + +  L  +G ++ A+ +L  M  K    D   Y  L  G C NG + +  +L +++L 
Sbjct: 218 TTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLG 277

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  +  +Y+ L++ LC+      A  +L++M   G+ PD++TY  LIDG CK G    
Sbjct: 278 KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATH 337

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNTLIN 541
           A+ +   M +  ++P+ V YN +++GLCK+   +DA K L    ++    D +TYNTL+ 
Sbjct: 338 AMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMK 397

Query: 542 GYFINGKIAEAFAMFSEMRNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           G    GK+ EA  +F+ M +    +  N   +N+LI  LCK G   +A ++ + M+  G 
Sbjct: 398 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGS 457

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             + VTY  L+    K    +E +EL   ++  G  P++ TY+ +I
Sbjct: 458 CGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 503



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 194/437 (44%), Gaps = 37/437 (8%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    +  LV    ++G  + A  V+  +   G    +  +   +  L K         L
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
              MV  G   +  T+N+++  LCKE  + +A  +   M++ G   +VV +N ++   C 
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ ALKLF  M   + + + PN  T N +I G CK GR+  A +I   M+K G   N
Sbjct: 402 KGKVDEALKLFNSM-FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGN 460

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY  L+ G  + G  +EA+ L  +++  G +PN+                        
Sbjct: 461 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS------------------------ 496

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
                      FTYSIL  G C+   +  A  L  ++    +    + YN L+  LCK  
Sbjct: 497 -----------FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +L  AK L   M      PDII++ T+IDG  K G+ +   ++   M ++  +P+ + ++
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++IN L K   LD AKS L+     G   DA+ Y++L+ G    G   E   +  +M   
Sbjct: 606 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665

Query: 563 GIAVNKVGYNILINFLC 579
           G  +++   + ++  LC
Sbjct: 666 GTVLDRKIVSTILTCLC 682



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 154/311 (49%), Gaps = 1/311 (0%)

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA+ L    +   L+P+    N  +  L    +   A  V   M    + P   + S L 
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           +        +  F +   VL+     + +  NI++  LC++  +  A  L+  M  + + 
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PDI++Y TLI+G CK   ++ AV +   M+     PN V   ++++GLCKD  +D A  L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L+A ++ G   D + Y TLI+G+  NG +     +F EM   GI+ N V Y+ L++ LC+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G +++A  ++  M  HGI PD VTYT L+    K+      ++L + MV  G  P N T
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 641 YNAIISPLLGE 651
           YN ++S L  E
Sbjct: 357 YNVLLSGLCKE 367



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 3/371 (0%)

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           ++LP+  T N +++   +      A  +   M    +  +  + + LI+ +A     +  
Sbjct: 69  NLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLG 128

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             +   ++KRG   N  + N  +  L   G V  A+ ++ +M  K + PD  +Y+ L  G
Sbjct: 129 FGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLING 188

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+   +K+A  L  ++       ++ +   L++ LCK   +  A +LL +M  +G   D
Sbjct: 189 LCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDAD 248

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++ YGTLI G+C  GN++   ++++ M       N+V Y+ +++GLC+      A ++L 
Sbjct: 249 VVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLN 308

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           A    G+  D +TY  LI+G   +G+   A  + + M   G   + V YN+L++ LCK G
Sbjct: 309 AMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEG 368

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG--VSPDNQT 640
               A +++++MI  G   D VTY TL+         +E ++L + M  +   + P+  T
Sbjct: 369 LVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFT 428

Query: 641 YNAIISPLLGE 651
           +N +I  L  E
Sbjct: 429 FNMLIGGLCKE 439



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 175/358 (48%), Gaps = 7/358 (1%)

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNV-RTYAT---LIDGYARGGSSEEALRLCDEMV 351
           +   C+    +F E +  ++  + +D N+  ++AT   L+D  AR  +   A  +   M 
Sbjct: 44  LRSLCQKPNSQFTEAV--SLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMT 101

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
              ++P+    ++ I         +    V+  ++ +    + F  +I+ KGLCRNG V 
Sbjct: 102 HVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVF 161

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L  ++  + +  D  SYN LIN LCK+  L  A  LL  M   G  P+ +T  TL+
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG CK G ++ A+++ E MKK     ++V+Y ++I+G C + +LD  K L       G+ 
Sbjct: 222 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + +TY+ L++G    G+  EA  + + M   GI  + V Y  LI+ LCK G    A +L
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + +M+  G  P  VTY  L++   K     +  ++   M+  G   D  TYN ++  L
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 3/279 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L+    + D+    +     F+ L+    + G    A  + +K+  KG   ++  +N  L
Sbjct: 409 LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 468

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
              +K  +I    +L+K+++  G+V N  T++++I   CK   L  A  L+  M   G+ 
Sbjct: 469 GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 528

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P +  +N ++   C+ G LE A  LF++MG  + +   P+ ++ N +I+G  K G  +F 
Sbjct: 529 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE---PDIISFNTMIDGTLKAGDFQFV 585

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           +E++  M++ G+  +  T++TLI+  ++ G  +EA    + MV  G  P+ +VY+S +  
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           L ++GD    + +L  M  K    D    S +   LC +
Sbjct: 646 LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 684



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 177/391 (45%), Gaps = 60/391 (15%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    + G    A+ +++ +  KG    +  +N  +  L    ++    KL+  M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415

Query: 208 V---SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
               +C    NV TFN++I  LCKE +L +A+ ++ +M+K G   N+V +NM++    + 
Sbjct: 416 FDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 474

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL---------------------- 302
           G ++ A++L++++  +     +PNS T++ +I+GFCK+                      
Sbjct: 475 GKIKEAMELWKQVLDLG---FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 531

Query: 303 -------------GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
                        G +E A+ +   M  A  + ++ ++ T+IDG  + G  +    L  +
Sbjct: 532 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMK 591

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MV+ GL P+ + +++ I+ L   G+++ A   L  M+     PD   Y  L KGL   G 
Sbjct: 592 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD 651

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +   L +Q+  +  V D    + ++  LC S         +  + V  L+P      T
Sbjct: 652 TTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS---------IQEVDVMELLP------T 696

Query: 470 LIDGYCKGGNI---EGAVQVYENMKKVEKKP 497
              G  +G +I   E  +Q++++  K++  P
Sbjct: 697 FFQGTSEGASISCNELLMQLHQSHPKLQLHP 727


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 184/637 (28%), Positives = 296/637 (46%), Gaps = 47/637 (7%)

Query: 50  ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNW-- 107
           I  +++P+  +SL+ R  S  R  PKL L+F+ W     R + S  +  A  HL V+   
Sbjct: 75  IPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYW--SRTRLAPSAPAPDAFAHLAVSLCA 132

Query: 108 -RRFDDALLLMGNLMSANSVSPLEF--LEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
              +  A  L+  ++ A    PL    +   L   +  +  P V D LV    + G    
Sbjct: 133 AGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGR-RPVVLDVLVDTYKKTGRVRD 191

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
             +V+  +K  G + S+   N  L  L++ + +   WK+   M   G   +V T++ +I 
Sbjct: 192 GAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIE 251

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A CK   LE A  +   M ++G   NVV +N +I   C+ G +E A    ++   M    
Sbjct: 252 AYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKE---MEDYG 308

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++P+  T+  IING CK GR + A+ +   M  AG+  NV  Y+TLIDG+ R G+++EA 
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++  EM   G+ PN + Y++ I  L   G +  A  +L  M       D  TY+++ +G 
Sbjct: 369 KIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGH 428

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            R    ++AF L N++ +  +  + Y+Y+I+IN LC+      A  LL  MI  GL P+ 
Sbjct: 429 LRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNA 488

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
             Y  LI GYC+ G+   A +  + M +    P+L  YNS+I GL     +D A      
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN---------------- 567
               G   +  TY  LI+GY + G + +A  +  +M N G+  N                
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDN 608

Query: 568 --KVG-----------------YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
             KV                  Y I+I+ L   G  Q A  ++ V+  +G++PD + Y +
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           L++ F K    E+ + L D+M   G+ P    YNA+I
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALI 705



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 251/533 (47%), Gaps = 39/533 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+ A  ++   E A  V+++++  G S+++  +N  +  L +   I   +   KEM
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEM 304

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G V +  T+  +I  LCK  + ++A  L   M  +G+ PNVV ++ +I+   + G+ 
Sbjct: 305 EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNA 364

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A K+ ++M   S   V PN +T++ +I G CKLGR+  A  I   M K G   +  TY
Sbjct: 365 DEAFKIVKEM---SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I+G+ R  + EEA  L +EM K G+ PN   Y+  I+ L   G+ E A  +L  MI 
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIA 481

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+ F Y+ L  G CR G    A +   ++  E++  D Y YN LI  L     +  
Sbjct: 482 DGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDE 541

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +    M+ +G  P+  TYG LI GY   GN+E A Q+   M      PN  IY  I+ 
Sbjct: 542 AIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILE 601

Query: 508 GLCKDASLDAAKSLLQASQRIGLL------------------------------------ 531
           G  K  +L+   S L++    GL+                                    
Sbjct: 602 GYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVP 661

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D++ Y +LI+G+     + +A  +  EM   GI      YN LI+  CK      AR + 
Sbjct: 662 DSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIF 721

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             +I  G+ P+ VTYTTL+  + K     + I+L+++M+  GV+PD   Y+ +
Sbjct: 722 NSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVL 774



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 241/491 (49%), Gaps = 24/491 (4%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+ ++ +++  G S +++ ++  ++ L ++ E  R   L ++M++ G   N   +  +
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I   C+E     A     +M +  + P++ C+N +I     VG ++ A++ + +M     
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM---LE 551

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               PN  T+  +I+G+   G +E AE++ + M+ +G++ N   YA +++GY +  + E+
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEK 611

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
                  M+++GLMP+N +Y   IH L + G ++ A+ VLS +    + PD   Y  L  
Sbjct: 612 VSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLIS 671

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+   +++A  L +++ ++ +      YN LI+  CKS++++ A+ + +S+I +GL P
Sbjct: 672 GFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPP 731

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +TY TLIDGYCK G+I  A+ +Y  M      P+  +Y+ +  G      L  A  + 
Sbjct: 732 NCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFIT 791

Query: 523 QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM------------RNVGIAVNKVG 570
           +     G     ++NTL++G+   GK+ E       M             N+ I + + G
Sbjct: 792 EEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAG 851

Query: 571 -----YNILINFLCKFGCYQQARELMKV---MILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
                + I +    K   ++    L  +   MI  G++P  V +  ++    K    ++ 
Sbjct: 852 KLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIH-NMIQSHCKQGYLDKA 910

Query: 623 IELHDDMVLSG 633
           + LHD +V  G
Sbjct: 911 LMLHDALVAKG 921



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 120/222 (54%), Gaps = 1/222 (0%)

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D Y+Y+ LI   CK  +L +AK+++  M   G   +++TY TLI G C+ G IE A    
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           + M+     P+   Y +IINGLCK    D AK LL      GL+ + + Y+TLI+G+   
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQ 361

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G   EAF +  EM   G+  NK+ Y+ LI  LCK G   +A  ++K M   G + D +TY
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             ++    +  + EE   L ++M   G+SP+  TY+ II+ L
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGL 463



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 21/276 (7%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH--------MVGDAYS----------YN 433
           PD F +  L   LC  G   QA  L +Q++  +         V  A S           +
Sbjct: 120 PDAFAH--LAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVVLD 177

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           +L++   K+  +    +++  M   GL P +     L+    +   ++   +V   M+  
Sbjct: 178 VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGA 237

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
              P++  Y+++I   CK   L++AK +++  +  G  L+ +TYNTLI G    G I EA
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           F    EM + G+  +   Y  +IN LCK G   QA+ L+  M   G++P+ V Y+TL+  
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           F +  + +E  ++  +M  +GV P+  TY+ +I  L
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 128/276 (46%), Gaps = 20/276 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++ +L+    +    E A  ++ ++  KG    I  +N  +    K ++I     ++  +
Sbjct: 665 IYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI 724

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N  T+  +I   CK   + +A+ LY  ML  G+ P+   ++++       GDL
Sbjct: 725 ICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDL 784

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL +  +M +  G +++    + N +++GFCK G+++   +  + M+   I  ++ T 
Sbjct: 785 QQALFITEEM-IARGYAIIS---SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTV 840

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++ G    G   EA  +  E+ ++     N  +  T H          +LF  +DMI+
Sbjct: 841 ENIVIGLGEAGKLSEAHTIFVELQQK-----NASHRDTDHL--------SSLF--TDMIN 885

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + + P    ++++ +  C+ G + +A  LH+ ++ +
Sbjct: 886 QGLVPLDVIHNMI-QSHCKQGYLDKALMLHDALVAK 920


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 263/496 (53%), Gaps = 7/496 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C   G  E A  +I+++  K  S  I ++N  ++ L K  ++     L  EM + G   N
Sbjct: 9   CRNGGVFE-AMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPN 67

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
             T   ++  LCK+ +++EA+ L   M K G   +VV +  +I+  C  G+L+   +LF 
Sbjct: 68  SVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFD 127

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M    G  +  N VT++C+++G C+LG+ + A  +  AM + GI  +V TY  LIDG  
Sbjct: 128 EM---LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 184

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G +  A+ L + MV++G  P+NV YN  +  L  EG V  A  +L  MI+K    D  
Sbjct: 185 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV 244

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEH--MVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           TY+ L KGLC  G V +A KL N + +    +  + +++N+LI  LCK   L  A ++  
Sbjct: 245 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 304

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+ +G   +++TY  L+ G  K G I+ A+++++ +  +   PN   Y+ +I+G CK  
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMR 364

Query: 514 SLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            L+ AK L    +  GL  A+  YNTL+      G + +A ++F EM N     + + +N
Sbjct: 365 MLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFN 424

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            +I+   K G +Q  +EL   M+  G+ PD +T++TL+ R SK    +E     + MV S
Sbjct: 425 TMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVAS 484

Query: 633 GVSPDNQTYNAIISPL 648
           G +PD   Y++++  L
Sbjct: 485 GFTPDALVYDSLLKGL 500



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 226/434 (52%), Gaps = 6/434 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            N+V+  LC+   + EA+ L   M +  + P++V +N +IN  C+   L+ A+ L  +M 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM- 59

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                   PNSVT   +++G CK GR++ A E+  AM K G D +V  Y TLI G+   G
Sbjct: 60  --EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           + +    L DEM+ +G+  N V Y+  +H L   G  + A  VL+ M +  I PD  TY+
Sbjct: 118 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC++G    A  L N ++E+       +YN+L++ LCK   +  A ++L  MI +
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIINGLCKDASLD 516
           G   D++TY TL+ G C  G ++ A++++ +M   E   +PN+  +N +I GLCK+  L 
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  + +   + G   + +TYN L+ G    GKI EA  ++ ++ ++G   N   Y+ILI
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           +  CK      A+ L   M  HG+ P    Y TL+    K  S E+   L  +M  +   
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417

Query: 636 PDNQTYNAIISPLL 649
           PD  ++N +I   L
Sbjct: 418 PDIISFNTMIDGTL 431



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 238/469 (50%), Gaps = 6/469 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A ++++ +K KG    +  +   +S       + R  +L+ EM+  G   NV T+
Sbjct: 82  GRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTY 141

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           + +++ LC+  + +EA ++   M + GI P+VV +  +I+  C+ G    A+ L   M V
Sbjct: 142 SCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM-V 200

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
             G+   P++VT+N +++G CK G V  A +I   MI+ G   +V TY TL+ G    G 
Sbjct: 201 EKGEE--PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 258

Query: 340 SEEALRLCDEMV--KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            +EAL+L + M   +  L PN   +N  I  L  EG +  A+ +   M+ K  C +  TY
Sbjct: 259 VDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTY 318

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           ++L  G  + G +K+A +L  QVL+   V ++++Y+ILI+  CK   L  AK L   M  
Sbjct: 319 NMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRT 378

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL P +  Y TL+   CK G++E A  +++ M     +P+++ +N++I+G  K      
Sbjct: 379 HGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQF 438

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            K L      +GL  DA+T++TLIN     G++ EA +    M   G   + + Y+ L+ 
Sbjct: 439 VKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLK 498

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            L   G   +   L+  M   G + D    +T++T    +    +V+EL
Sbjct: 499 GLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMEL 547



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 203/405 (50%), Gaps = 6/405 (1%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N+++   C+ G +  A+ L R+MG     SV P+ V++N +ING CK  +++ A  +  
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGR---KSVSPDIVSYNTLINGLCKAKKLKEAVGLLL 57

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M  AG   N  T  TL+DG  + G  +EA+ L + M K+G   + V+Y + I      G
Sbjct: 58  EMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 117

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           +++    +  +M+ K I  +  TYS L  GLCR G  K+A  + N + E  +  D  +Y 
Sbjct: 118 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 177

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+ LCK      A  LL+ M+ +G  P  +TY  L+ G CK G +  A ++   M + 
Sbjct: 178 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 237

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQA---SQRIGLLDAITYNTLINGYFINGKIA 550
            KK ++V YN+++ GLC    +D A  L  +   ++     +  T+N LI G    G++ 
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A  +  +M   G   N V YN+L+    K G  ++A EL K ++  G +P+  TY+ L+
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             F K         L  +M   G++P    YN +++ L  E S E
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 402



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 194/437 (44%), Gaps = 37/437 (8%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    +  LV    ++G  + A  V+  +   G    +  +   +  L K         L
Sbjct: 136 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 195

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
              MV  G   +  T+N+++  LCKE  + +A  +   M++ G   +VV +N ++   C 
Sbjct: 196 LNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 255

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ ALKLF  M   + + + PN  T N +I G CK GR+  A +I   M+K G   N
Sbjct: 256 KGKVDEALKLFNSM-FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGN 314

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY  L+ G  + G  +EA+ L  +++  G +PN+                        
Sbjct: 315 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNS------------------------ 350

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
                      FTYSIL  G C+   +  A  L  ++    +    + YN L+  LCK  
Sbjct: 351 -----------FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 399

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +L  AK L   M      PDII++ T+IDG  K G+ +   ++   M ++  +P+ + ++
Sbjct: 400 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 459

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++IN L K   LD AKS L+     G   DA+ Y++L+ G    G   E   +  +M   
Sbjct: 460 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519

Query: 563 GIAVNKVGYNILINFLC 579
           G  +++   + ++  LC
Sbjct: 520 GTVLDRKIVSTILTCLC 536



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 138/279 (49%), Gaps = 3/279 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L+    + D+    +     F+ L+    + G    A  + +K+  KG   ++  +N  L
Sbjct: 263 LKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 322

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
              +K  +I    +L+K+++  G+V N  T++++I   CK   L  A  L+  M   G+ 
Sbjct: 323 GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 382

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P +  +N ++   C+ G LE A  LF++MG  + +   P+ ++ N +I+G  K G  +F 
Sbjct: 383 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE---PDIISFNTMIDGTLKAGDFQFV 439

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           +E++  M++ G+  +  T++TLI+  ++ G  +EA    + MV  G  P+ +VY+S +  
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           L ++GD    + +L  M  K    D    S +   LC +
Sbjct: 500 LSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS 538



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/391 (23%), Positives = 177/391 (45%), Gaps = 60/391 (15%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    + G    A+ +++ +  KG    +  +N  +  L    ++    KL+  M
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 269

Query: 208 V---SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
               +C    NV TFN++I  LCKE +L +A+ ++ +M+K G   N+V +NM++    + 
Sbjct: 270 FDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 328

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL---------------------- 302
           G ++ A++L++++  +     +PNS T++ +I+GFCK+                      
Sbjct: 329 GKIKEAMELWKQVLDLG---FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 385

Query: 303 -------------GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
                        G +E A+ +   M  A  + ++ ++ T+IDG  + G  +    L  +
Sbjct: 386 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMK 445

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MV+ GL P+ + +++ I+ L   G+++ A   L  M+     PD   Y  L KGL   G 
Sbjct: 446 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD 505

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +   L +Q+  +  V D    + ++  LC S         +  + V  L+P      T
Sbjct: 506 TTEIINLLHQMAAKGTVLDRKIVSTILTCLCHS---------IQEVDVMELLP------T 550

Query: 470 LIDGYCKGGNI---EGAVQVYENMKKVEKKP 497
              G  +G +I   E  +Q++++  K++  P
Sbjct: 551 FFQGTSEGASISCNELLMQLHQSHPKLQLHP 581


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 240/455 (52%), Gaps = 6/455 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G+  +V T++ +I  LCK  K+ EAL +   M + G+ P+V  + +I++  C+ G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A +LF KM +  G S   N+V +N +ING CK   +E A ++   M   G + +  T
Sbjct: 61  VDEADELFHKM-IERGCSA--NTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--LFVLSD 384
           Y T++ G  R G   EA +  D M  RG  P+ V YN  +  L+ EG V  A  LF   D
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M D+ + PD  TY+ L  G CR     +A KL   V+ +  + D  +YN ++  L + +N
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+++   M+  G  P+  TY  ++ G+C+ GN+   +++YE M +    P++++ N+
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+ LCK   +D A  +L+   +IG + D +TYN L++G      + +A  +FS M + G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
            A + V Y++++N LCK      AR L   MI   ++PD VT+  L+    K    +E  
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +L D M    V PD  T   ++  L  +K  ++ V
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/504 (29%), Positives = 261/504 (51%), Gaps = 8/504 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           + D L RA    G  + A ++  K+  +G S +  A+N  ++ L K   I R +KL +EM
Sbjct: 51  IVDRLCRA----GKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEM 106

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S GY  +  T+N ++  LC+  K+ EA   +  M   G  P+VV +N +++   + G +
Sbjct: 107 ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKV 166

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  LF+ M  M+   V P+ +T+N +I+GFC++ + + A ++   +I  G   +  TY
Sbjct: 167 AEAWGLFKTMD-MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTY 225

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +++ G AR  + +EA  +  +MV  G  PN   Y+  +      G++   L +  +M +
Sbjct: 226 NSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   PD    + +   LC+   V  A K+  ++ +   V D  +YNIL++ LCK+N +  
Sbjct: 286 KRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDK 345

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L S+M+  G  PDI++Y  +++G CK   +  A  +++ M + +  P++V +N +++
Sbjct: 346 AHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMD 405

Query: 508 GLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK   LD AK LL   S+   L D +T  TL++G   + +  EA  +F  M   G   
Sbjct: 406 GLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVA 465

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHG--IIPDYVTYTTLVTRFSKNCSPEEVIE 624
           + + +NI++  LC+ G   QA    K M+       PD VTYTTLV    +    ++ ++
Sbjct: 466 DVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVD 525

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
               M  SG +PD   YN +++ L
Sbjct: 526 YFQQMTGSGCAPDYVAYNTLMNGL 549



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 250/480 (52%), Gaps = 8/480 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C A    ++AL+    +    E AY +++++  KG+      +N  LS L ++ ++    
Sbjct: 76  CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAK 135

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY--YRMLKSGIWPNVVCFNMIIN 259
           + +  M S GY  +V  +N ++ AL KE K+ EA  L+    M    + P+++ +N +I+
Sbjct: 136 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLID 195

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+V   + A+KLF+ + +  G   +P++VT+N I+ G  +   ++ AEE+   M+ +G
Sbjct: 196 GFCRVEKTDEAMKLFKDV-IAKG--YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              N  TY+ ++ G+ R G+    L L +EM ++   P+ ++ N+ I  L     V+ A 
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAH 312

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            VL +M      PD  TY+IL  GLC+   V +A +L + +++     D  SY++++N L
Sbjct: 313 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 372

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+N +  A+ L   MI R L+PD++T+  L+DG CK G ++ A  + + M +    P+ 
Sbjct: 373 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDG 432

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V   ++++GLC+D   D A  L Q     G + D + +N ++ G    GK+A+A   F  
Sbjct: 433 VTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492

Query: 559 M--RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           M   +   + + V Y  L+N L + G   QA +  + M   G  PDYV Y TL+    K 
Sbjct: 493 MVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 235/496 (47%), Gaps = 30/496 (6%)

Query: 45  QRKWKILEQMAP---SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           +R +K+LE+MA       N   N ++S   +  K        V E  +F  S+ S     
Sbjct: 97  ERAYKLLEEMASKGYEPDNITYNTILSGLCRMGK--------VSEAKQFFDSMPSR-GYS 147

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEIC--KATPAV--FDALVRACT 157
             +V +    DAL   G +  A          GL  + ++   K  P +  ++ L+    
Sbjct: 148 PDVVAYNGLLDALYKEGKVAEA---------WGLFKTMDMADRKVAPDLITYNTLIDGFC 198

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           ++  T+ A  + + +  KG+      +N+ L  L + + +    +++K+MV  G   N  
Sbjct: 199 RVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGA 258

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+++V+   C+   +   L LY  M +    P+V+  N +I+  C+   ++ A K+  +M
Sbjct: 259 TYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             +     +P+ VT+N +++G CK   V+ A E+   M+  G   ++ +Y+ +++G  + 
Sbjct: 319 SKIGA---VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 375

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
               +A  L D M++R L+P+ V +N  +  L   G ++ A  +L  M + ++ PD  T 
Sbjct: 376 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTC 435

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  GLCR+    +A +L   ++E+  V D   +NI++  LC+   LA A     SM+ 
Sbjct: 436 TTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVK 495

Query: 458 RG--LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
                 PD++TY TL++   + G ++ AV  ++ M      P+ V YN+++NGL K    
Sbjct: 496 SDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRH 555

Query: 516 DAAKSLLQASQRIGLL 531
             A  L QA +  G L
Sbjct: 556 IQADRLTQAMKEKGFL 571



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 157/322 (48%), Gaps = 11/322 (3%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQ 170
           +++L G+    N    LE  E + +     + +P V   +A++    +    + A+ V++
Sbjct: 261 SIVLSGHCRVGNMARCLELYEEMTEK----RFSPDVLLCNAVIDMLCKAKKVDDAHKVLE 316

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++   G    +  +N  L  L K N + +  +L+  MV  G   ++ ++++V+  LCK  
Sbjct: 317 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 376

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K+ +A  L+ RM++  + P+VV FN++++  C+ G L+ A  L   + VMS  +VLP+ V
Sbjct: 377 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL---LDVMSEHNVLPDGV 433

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T   +++G C+  R + A  +   M++ G   +V  +  ++ G  R G   +AL     M
Sbjct: 434 TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM 493

Query: 351 VKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           VK      P+ V Y + ++ L   G V+ A+     M      PD+  Y+ L  GL + G
Sbjct: 494 VKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQG 553

Query: 409 CVKQAFKLHNQVLEEHMVGDAY 430
              QA +L   + E+  + D +
Sbjct: 554 RHIQADRLTQAMKEKGFLSDCF 575


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 232/435 (53%), Gaps = 7/435 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V T+N++I  LCK  K ++A  + + M+  G+ P+ V FN I++  C+ G  E A  L 
Sbjct: 9   DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL- 67

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
             + VM+  +  P+  T+N +I+G CK   V+ A+ +    + +G   +V TY+ L DG 
Sbjct: 68  --LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  +EA  L  EM   G  PN V YN+ I  L      E A  +L  ++     PD 
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+I+  GLC+ G + +A K+   +L+        +Y  L+  LC++  +  A  +   
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+ +    D + Y +L++GYCK    + A +V + ++     P + +YN++++G CK+  
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGR 302

Query: 515 LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD   ++ +     G +  I TYN +++G   +GK+ EAF     M + G   + V YNI
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I+ L K    ++AR+++  MI  GI PD VTY TL+ +F K    ++ + +  +M+ +G
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 422

Query: 634 VSPDNQTYNAIISPL 648
           V PDN TYN +IS L
Sbjct: 423 VDPDNVTYNTLISGL 437



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 254/515 (49%), Gaps = 14/515 (2%)

Query: 143 KATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K  P VF  + L+    +   T+ A +++ ++  +G +     +N+ +  L K  +  R 
Sbjct: 5   KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             L   M       +  T+N +I  LCK+  ++ A +L    + SG  P+VV ++++ + 
Sbjct: 65  HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G ++ A +L ++   MSG+   PN VT+N +I+G CK  + E A E+   ++ +G 
Sbjct: 125 LCKRGRIDEAFELVKE---MSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY  ++DG  + G  ++AL++ + M+KRG  P+ + Y + +  L   G V+ A  
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY--SYNILINY 438
           +  +M+ K    D   Y  L  G C++   K+A K+ + +      G  Y   YN L++ 
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR-----GTPYIDVYNALMDG 296

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            CK   L     +   M  RG +P+I TY  ++DG CK G ++ A    E+M      P+
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           +V YN II+GL K +    A+ +L    + G+  DA+TYNTL+  +    +  +A  +  
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG-IIPDYVTYTTLVTRFSKN 616
            M   G+  + V YN LI+ L +      A ELM  M+ +G ++    TY T++ R  K 
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
              ++ + L D M   GV  +  TYN  I  L  E
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKE 511



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 264/549 (48%), Gaps = 43/549 (7%)

Query: 145 TP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP    F++++    + G  E A+ ++  +  +    S   +N  +S L K   + R   
Sbjct: 42  TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKT 101

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  E VS G+V +V T++++   LCK  +++EA  L   M  +G  PN+V +N +I+  C
Sbjct: 102 LVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLC 161

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +    E A +L   + V SG   +P+ VT+  I++G CK GR++ A ++   M+K G   
Sbjct: 162 KASKTEKAYELLETL-VSSG--FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 218

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV---------------------- 360
           +V TY  L++G  R G  +EA  +  EMV +    + +                      
Sbjct: 219 SVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 278

Query: 361 ----------VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
                     VYN+ +     EG ++    V  DM  +   P+  TY+I+  GLC++G V
Sbjct: 279 DGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +AF     +     V D  SYNI+I+ L K++    A+Q+L  MI  G+ PD +TY TL
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +  +CK    + AV + +NM K    P+ V YN++I+GL +   L  A  L+    R G 
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458

Query: 531 LDA--ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           + +   TYNT+I+     G + +A  +   M   G+  N V YNI I+ LCK G   +A 
Sbjct: 459 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 518

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV-LSGVSPDNQTYNAIISP 647
            L+  M     + D V+YTT++    K    +   +L  +MV + G+   + T+N +I  
Sbjct: 519 SLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 575

Query: 648 LLGEKSAED 656
               K  ++
Sbjct: 576 FTKTKRLDE 584



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 215/417 (51%), Gaps = 5/417 (1%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M +  + P+V  +N++I+  C+    + A ++  +M V  G  V P++VT N I++G CK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM-VDRG--VTPDTVTFNSIMDGLCK 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            G+ E A  +   M +     +  TY TLI G  +  + + A  L DE V  G +P+ V 
Sbjct: 58  AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y+     L   G ++ A  ++ +M      P+  TY+ L  GLC+    ++A++L   ++
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
               V D  +Y I+++ LCK   L  A +++  M+ RG  P +ITY  L++G C+ G ++
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVD 237

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLIN 541
            A  +++ M   +   + + Y S++NG CK +    A+ ++   +    +D   YN L++
Sbjct: 238 EAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV--YNALMD 295

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           GY   G++ E   +F +M   G   N   YNI+++ LCK G   +A   ++ M   G +P
Sbjct: 296 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 355

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           D V+Y  ++    K   P+E  ++ D M+ +G+ PD  TYN +++    E+  +D V
Sbjct: 356 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAV 412



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 256/553 (46%), Gaps = 45/553 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    +   TE AY++++ L   G    +  +   +  L K   + +  
Sbjct: 146 CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKAL 205

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK----------------- 244
           K+ + M+  G   +V T+  ++  LC+  +++EA  ++  M+                  
Sbjct: 206 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 265

Query: 245 -------------SGI--WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
                         GI   P +  +N +++  C+ G L+    +F  M        +PN 
Sbjct: 266 CKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG---CVPNI 322

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+N +++G CK G+V+ A     +M  AG   +V +Y  +IDG  +    +EA ++ D+
Sbjct: 323 KTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 382

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M++ G+ P+ V YN+ +     E   + A+ +L +MI   + PD+ TY+ L  GL +   
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNR 442

Query: 410 VKQAFKLHNQVLEEHMVGDA-YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           +  A++L +++L    V  A  +YN +I+ LCK   L  A  L+  M   G+  + +TY 
Sbjct: 443 LGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYN 502

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             ID  CK G ++ A  +   M  +  +   V Y ++I GLCK   LD A  L +    +
Sbjct: 503 IFIDRLCKEGRLDEASSLLSEMDTLRDE---VSYTTVIIGLCKAEQLDRASKLAREMVAV 559

Query: 529 -GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL + + T+N LI+ +    ++ EA  +   M   G + + + YN++I  LCK     +
Sbjct: 560 KGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDK 619

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN----QTYN 642
           A EL   M + GI+   V+YT L+         +E +++ ++M  S    D+    + Y 
Sbjct: 620 AWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYL 679

Query: 643 AIISPLLGEKSAE 655
           A+     GE++AE
Sbjct: 680 ALRGQGRGEEAAE 692


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 252/473 (53%), Gaps = 14/473 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL--VKLNEIGRFWKLYKE 206
           FDAL+R+   +     A   +      G++ S+ A+N  L  L    L    RF      
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLS---S 142

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   NV T+N+++ ALC   +LEEA+ +   M  +G  PN V +N ++   C+ G+
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 267 LEFA---LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           L+ A   + L R+ G     +  PN VT N ++NG CK GR+E A ++   M++ G+  +
Sbjct: 203 LDGAERVVSLMREEG-----NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y TL+ GY + G   E+L +  EM +RGL+P+ V + S IH     G++E A+ +++
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M ++ +  +  T++ L  G C+ G +  A     ++ +  +      YN LIN  CK  
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A++L+  M  + + PD++TY T+I GYCK GN++ A Q+ + M K    P+ + Y+
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           S+I GLC++  L+ A  L +   ++G+  D  TY TLI+G+   G + +A ++  EM   
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           G+  + V Y++LIN L K    ++A  L+  +     +PD + Y  L+   SK
Sbjct: 498 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/442 (32%), Positives = 237/442 (53%), Gaps = 16/442 (3%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  +V  +N V+ AL  +  L  A      ML+ G+ PNV  +N+++   C  G LE A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG-IDCNVRTYAT 329
           + +   +G M G    PN+VT+N ++  FC+ G ++ AE +   M + G    N+ T+ +
Sbjct: 172 VGV---VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +++G  + G  E A ++ DEMV+ GL P+ V YN+ +      G +  +L V S+M  + 
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  T++ L    C+ G ++QA  L  Q+ E  +  +  ++  LI+  CK   L  A 
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             +  M   G+ P ++ Y  LI+GYCK G ++ A ++   M+    KP++V Y++II+G 
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK  +LD+A  L Q   + G+L DAITY++LI G     ++ +A  +F  M  +G+  ++
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL--- 625
             Y  LI+  CK G  ++A  L   MI  G++PD VTY+ L+   SK+   +E   L   
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 626 --HDDMVLSGVSPDNQTYNAII 645
             H+D V     PDN  Y+A++
Sbjct: 529 LYHEDPV-----PDNIKYDALM 545



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 224/418 (53%), Gaps = 16/418 (3%)

Query: 246 GIWPNVVCFNMII---NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           G  P+V  +N ++   ++A       F   + R         V PN  T+N ++   C  
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLSSMLRH-------GVAPNVYTYNILVRALCAR 165

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVV 361
           GR+E A  +   M  AG   N  TY TL+  + R G  + A R+   M + G   PN V 
Sbjct: 166 GRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVT 225

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +NS ++ L   G +EGA  V  +M+ + + PD  +Y+ L  G C+ GC+ ++  + +++ 
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  +V D  ++  LI+  CK+ NL  A  L++ M  RGL  + +T+  LIDG+CK G ++
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTL 539
            A+   E M+K   +P++V YN++ING CK   +D A+ L++   ++R+   D +TY+T+
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTI 404

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GY   G +  AF +  +M   G+  + + Y+ LI  LC+      A EL + M+  G+
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
            PD  TYTTL+    K  + E+ + LHD+M+  GV PD  TY+ +I+ L   KSA  +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL--SKSARTK 520



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 241/478 (50%), Gaps = 25/478 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     F+++V    + G  EGA  V  ++  +G +  + ++N  LS   K+  +     
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 279

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ EM   G V +V TF  +I+A CK   LE+A++L  +M + G+  N V F  +I+  C
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339

Query: 263 QVGDLE---FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           + G L+    A++  RK G+       P+ V +N +ING+CKLGR++ A E+   M    
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQ------PSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V TY+T+I GY + G+ + A +L  +M+K+G++P+ + Y+S I  L  E  +  A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +  +M+   + PD FTY+ L  G C+ G V++A  LH++++ + ++ D  +Y++LIN L
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYG---------------TLIDGYCKGGNIEGAV 484
            KS     A +LL  +     +PD I Y                 L+ G+C  G ++ A 
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 573

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           +VY++M     K +  +Y+ +I+G C+  ++  A S  +   R G   ++ +  +L+ G 
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           F  G + EA     ++       +      LI+   K G      +++  M   G++P
Sbjct: 634 FEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 691


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 151/422 (35%), Positives = 233/422 (55%), Gaps = 11/422 (2%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M K G WPN + +N +++  C  G +  A  L+ +M + +G S  P+ VT+N +++GFCK
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM-IKAGYS--PDVVTYNTLLHGFCK 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G ++ A +I    +K G   +V TY  LI+G+ +    +EA R+   MV   L+P+ V 
Sbjct: 58  VGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN-GCVKQAFKLHNQV 420
           YNS ++ L   G V+ A  ++   +DK   P+  TYS L  GLCR    V +A KL   V
Sbjct: 118 YNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSV 174

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           L++    +  +YNILI+ L K + +  A +L S ++  GL PD ITY   IDG CK G +
Sbjct: 175 LKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
           E A+ + ++M +    P++V +N++INGLCK+  +D A+ LL   +  G   +AI++NTL
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF---GCYQQARELMKVMIL 596
           I G    GK  +A   F EM   G+    V YNIL++ LCK    G  ++A  L   MI 
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G +PD VTY+ L+    K    ++   L   M   G  P+  TYN++IS L G +  ++
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414

Query: 657 QV 658
            +
Sbjct: 415 AL 416



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/434 (33%), Positives = 231/434 (53%), Gaps = 11/434 (2%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  LS L     +     LY+ M+  GY  +V T+N +++  CK  +L+EAL ++   
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           +K G  P+VV +N +IN  C+   L+ A ++ ++M     ++++P+ VT+N ++NG CK 
Sbjct: 72  VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM---VSENLVPDVVTYNSLVNGLCKN 128

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG-GSSEEALRLCDEMVKRGLMPNNVV 361
           GRV+   E R  ++  G   NV TY+TLI G  R      EAL+L   ++K+G  P    
Sbjct: 129 GRVD---EARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPT 185

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  I  L  E  V  A  + S ++   + PD  TY++   GLC+ G V+ A  +   + 
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E+  V D  S+N +IN LCK   +  A+ LLS M  +G  P+ I++ TLI G C+ G  +
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 305

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCK---DASLDAAKSLLQASQRIGLL-DAITYN 537
            A+  ++ M K   KP +V YN +++GLCK   +  +  A +L  A    G + D +TY+
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 365

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LI+G    GK+ +A  +   M   G   N   YN LI+ LC      +A EL   M+  
Sbjct: 366 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEK 425

Query: 598 GIIPDYVTYTTLVT 611
           G +PD +TY T+++
Sbjct: 426 GCVPDTITYGTIIS 439



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 222/434 (51%), Gaps = 11/434 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++AL+      G    A  + +++   G+S  +  +N  L    K+ E+    K++   
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+V +V T+N +I   CK  KL+EA  +  RM+   + P+VV +N ++N  C+ G +
Sbjct: 72  VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK-LGRVEFAEEIRYAMIKAGIDCNVRT 326
           + A  L    G        PN +T++ +I+G C+ L  V  A ++  +++K G +  V T
Sbjct: 132 DEARMLIVDKGFS------PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPT 185

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LIDG  +     EA  L   +VK GL P+ + Y   I  L   G VE AL +L DM 
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K   PD  +++ +  GLC+   V +A  L + +  +    +A S+N LI   C++    
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 305

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKG---GNIEGAVQVYENMKKVEKKPNLVIYN 503
            A      M+ RG+ P ++TY  L+DG CK    G I+ A+ +++ M +  + P++V Y+
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 365

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+GL K   LD A+ LL A +  G +  + TYN+LI+G     K+ EA  +F  M   
Sbjct: 366 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEK 425

Query: 563 GIAVNKVGYNILIN 576
           G   + + Y  +I+
Sbjct: 426 GCVPDTITYGTIIS 439


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 177/634 (27%), Positives = 306/634 (48%), Gaps = 66/634 (10%)

Query: 47  KWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVN 106
           K   L+ M  +++ S V+ + S     PK AL F  W+ +N R+ HS+ S  +++ LL+N
Sbjct: 77  KSPSLKSMVSAISPSHVSSLFS-LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLIN 135

Query: 107 WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDAL--VRACTQIGATEG 164
                            N    + F   LL    + K+  +V DAL  +  C ++   E 
Sbjct: 136 -----------------NGYVGVVFKIRLL----MIKSCDSVGDALYVLDLCRKMNKDE- 173

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
                 + ++K + + I  +N  L+ L +   +    ++Y EM+      N+ T+N ++ 
Sbjct: 174 ------RFELK-YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN 226

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV----- 279
             CK   +EEA     +++++G+ P+   +  +I   CQ  DL+ A K+F +M +     
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286

Query: 280 ---------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
                                      M  D   P   T+  +I   C   R   A  + 
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M + GI  N+ TY  LID        E+A  L  +M+++GLMPN + YN+ I+     
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G +E A+ V+  M  + + P+  TY+ L KG C++  V +A  + N++LE  ++ D  +Y
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N LI+  C+S N  +A +LLS M  RGL+PD  TY ++ID  CK   +E A  +++++++
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAE 551
               PN+V+Y ++I+G CK   +D A  +L+    +  L +++T+N LI+G   +GK+ E
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +  +M  +G+        ILI+ L K G +  A    + M+  G  PD  TYTT + 
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            + +     +  ++   M  +GVSPD  TY+++I
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 247/473 (52%), Gaps = 15/473 (3%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFNLVIYALCKECKLEEALSL 238
           S++++ + L+ L+    +G  +K+   M+ SC  V +     L +  LC++   +E   L
Sbjct: 122 SVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDA----LYVLDLCRKMNKDERFEL 177

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
            Y+++       + C+N ++N   + G ++   +++ +M     D V PN  T+N ++NG
Sbjct: 178 KYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEM---LEDKVCPNIYTYNKMVNG 227

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           +CKLG VE A +    +++AG+D +  TY +LI GY +    + A ++ +EM  +G   N
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRN 287

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V Y   IH L     ++ A+ +   M D    P   TY++L K LC +    +A  L  
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ E  +  + ++Y +LI+ LC       A++LL  M+ +GL+P++ITY  LI+GYCK G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
            IE AV V E M+  +  PN   YN +I G CK     A   L +  +R  L D +TYN+
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNS 467

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI+G   +G    A+ + S M + G+  ++  Y  +I+ LCK    ++A +L   +   G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + P+ V YT L+  + K    +E   + + M+     P++ T+NA+I  L  +
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 23/517 (4%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +L+    Q    + A+ V  ++ +KG   +  A+ + +  L     I     L+ +M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                   V T+ ++I +LC   +  EAL+L   M ++GI PN+  + ++I+  C     
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A +L   +G M    ++PN +T+N +ING+CK G +E A ++   M    +  N RTY
Sbjct: 375 EKAREL---LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI GY +  +  +A+ + ++M++R ++P+ V YNS I      G+ + A  +LS M D
Sbjct: 432 NELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + PD +TY+ +   LC++  V++A  L + + ++ +  +   Y  LI+  CK+  +  
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+ +  +P+ +T+  LI G C  G ++ A  + E M K+  +P +     +I+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L KD   D A S  Q     G   DA TY T I  Y   G++ +A  M ++MR  G++ 
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF-------SKNCSP 619
           +   Y+ LI      G    A +++K M   G  P   T+ +L+           K   P
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730

Query: 620 E-----------EVIELHDDMVLSGVSPDNQTYNAII 645
           E            V+EL + MV   V+P+ ++Y  +I
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/600 (23%), Positives = 267/600 (44%), Gaps = 74/600 (12%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H L   RR D+A+ L   +                   + C  T   +  L+++    
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKD-----------------DECFPTVRTYTVLIKSLCGS 336

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                A +++++++  G   +IH +   +  L    +  +  +L  +M+  G + NV T+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396

Query: 220 NLVIYALCKECKLEEA----------------------------------LSLYYRMLKS 245
           N +I   CK   +E+A                                  + +  +ML+ 
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
            + P+VV +N +I+  C+ G+ + A   +R + +M+   ++P+  T+  +I+  CK  RV
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSA---YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           E A ++  ++ + G++ NV  Y  LIDGY + G  +EA  + ++M+ +  +PN++ +N+ 
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           IH L A+G ++ A  +   M+   + P   T +IL   L ++G    A+    Q+L    
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             DA++Y   I   C+   L  A+ +++ M   G+ PD+ TY +LI GY   G    A  
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCK---------DASLDAAKSLLQASQRIGLLD---- 532
           V + M+    +P+   + S+I  L +         +  L A  ++++    + LL+    
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753

Query: 533 ------AITYNTLINGYFINGKIAEAFAMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQ 585
                 A +Y  LI G    G +  A  +F  M RN GI+ +++ +N L++  CK   + 
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A +++  MI  G +P   +   L+    K    E    +  +++  G   D   +  II
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 9/348 (2%)

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E++Y +I   I C    Y TL++  AR G  +E  ++  EM++  + PN   YN  ++  
Sbjct: 176 ELKYKLI---IGC----YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G+VE A   +S +++  + PD FTY+ L  G C+   +  AFK+ N++  +    + 
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +Y  LI+ LC +  +  A  L   M      P + TY  LI   C       A+ + + 
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M++   KPN+  Y  +I+ LC     + A+ LL      GL+ + ITYN LINGY   G 
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I +A  +   M +  ++ N   YN LI   CK   ++ A  ++  M+   ++PD VTY +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNS 467

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    ++ + +    L   M   G+ PD  TY ++I  L   K  E+
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 193/415 (46%), Gaps = 23/415 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +++ +  +    E A D+   L+ KG + ++  +   +    K  ++     + ++M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S   + N  TFN +I+ LC + KL+EA  L  +M+K G+ P V    ++I+   + GD 
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A   F++M + SG    P++ T+   I  +C+ GR+  AE++   M + G+  ++ TY
Sbjct: 619 DHAYSRFQQM-LSSGTK--PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF--AEGDVEGA------- 378
           ++LI GY   G +  A  +   M   G  P+   + S I  L     G  +G+       
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735

Query: 379 ---------LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE-EHMVGD 428
                    + +L  M++  + P+  +Y  L  G+C  G ++ A K+ + +   E +   
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              +N L++  CK      A +++  MI  G +P + +   LI G  K G  E    V++
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
           N+ +     + + +  II+G+ K   ++A   L    ++ G    + TY+ LI G
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 203/484 (41%), Gaps = 30/484 (6%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           G+L+     K  P V  +++L+    + G  + AY ++  +  +G       + + +  L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K   +     L+  +   G   NV  +  +I   CK  K++EA  +  +ML     PN 
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + FN +I+  C  G L+ A  L  KM  +    + P   T   +I+   K G  + A   
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKI---GLQPTVSTDTILIHRLLKDGDFDHAYSR 624

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M+ +G   +  TY T I  Y R G   +A  +  +M + G+ P+   Y+S I     
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G    A  VL  M D    P   T+  L K L      KQ                   
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE------------- 731

Query: 432 YNILINYLCKSNNLA---AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
                  LC  +N+       +LL  M+   + P+  +Y  LI G C+ GN+  A +V++
Sbjct: 732 -------LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784

Query: 489 NMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFIN 546
           +M++ E   P+ +++N++++  CK    + A  ++     +G L  + +   LI G +  
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G+     ++F  +   G   +++ + I+I+ + K G  +   EL  VM  +G      TY
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904

Query: 607 TTLV 610
           + L+
Sbjct: 905 SLLI 908



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 8/256 (3%)

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LCR     + F+L  +++    +G    YN L+N L +   +   KQ+   M+   + P+
Sbjct: 165 LCRKMNKDERFELKYKLI----IG---CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I TY  +++GYCK GN+E A Q    + +    P+   Y S+I G C+   LD+A  +  
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G   + + Y  LI+G  +  +I EA  +F +M++         Y +LI  LC   
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A  L+K M   GI P+  TYT L+      C  E+  EL   M+  G+ P+  TYN
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397

Query: 643 AIISPLLGEKSAEDQV 658
           A+I+        ED V
Sbjct: 398 ALINGYCKRGMIEDAV 413


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 282/545 (51%), Gaps = 12/545 (2%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLK 173
           ++G L  AN +   E +E L +  E  +  P  +  + ++      G  + AY ++++ K
Sbjct: 306 MIGVLCKANRLD--EAVE-LFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQK 362

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            KG   S+ A+N  L+ L K   +    ++++EM     V NV T+N++I  LC+E KL 
Sbjct: 363 AKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLN 421

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV-LPNSVTH 292
            AL +   M ++G++PNV+  N++I+  C+   LE A  +F  M     D V  PN+VT 
Sbjct: 422 AALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD----DKVCTPNAVTF 477

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           + +I+G  K GRV+ A  +   M+  G       Y +LI  + + G  E+  ++  EMV 
Sbjct: 478 SSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 537

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+  + N+ +  +F  G+ E    +  ++      PD  +YSIL  GL + G   +
Sbjct: 538 TGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANE 597

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
            ++L   + E+  V D ++YN +I+  CKS  +  A QLL  M V+G  P ++TYG++ID
Sbjct: 598 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVID 657

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G  K   ++ A  ++E  K    K N+V+Y+S+I+G  K   +D A  +++   + GL  
Sbjct: 658 GLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 717

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
            + T+N L++      +I EA   F  M+++    N++ Y+ILIN LC+   + +A    
Sbjct: 718 NVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFW 777

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + M   G+ P+ +TYTT+++  +K  +  E   L      +G  PD+ +YNA+I  L   
Sbjct: 778 QEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSA 837

Query: 652 KSAED 656
             A D
Sbjct: 838 NKAMD 842



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/600 (23%), Positives = 264/600 (44%), Gaps = 31/600 (5%)

Query: 52  EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD 111
           E+  P L   ++ R+     K    A+ ++ W  +     H  E+  +++ ++     FD
Sbjct: 88  EKPLPELVIGVLKRL-----KDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFD 142

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA--VFDALVRACTQIGATEGAYDVI 169
                               LE +L+   +    P+  +   LV  C +      A+D+I
Sbjct: 143 -------------------HLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDII 183

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           Q ++      +  A+   +  L ++ E      L+ +M   GY  NV+ F  +I    +E
Sbjct: 184 QTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +++ ALSL   M  + +  ++V +N+ I+   + G ++ + K F +   M    ++P+ 
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHE---MKSHGLMPDD 300

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+  +I   CK  R++ A E+   + +         Y T+I GY   G  +EA  L + 
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
              +G +P+ + YN  +  L  +  VE AL +  +M  +   P+  TY+IL   LCR G 
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGK 419

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A ++ + +    +  +  + NI+I+ LCK+  L  A  +   M  +   P+ +T+ +
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSS 479

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG  K G ++ A  +YE M      P  ++Y S+I    K    +    + +     G
Sbjct: 480 LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTG 539

Query: 530 LLDAITY-NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
               +T  NT ++  F  G+  +  A+F E+   G   +   Y+ILI+ L K G   +  
Sbjct: 540 CSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETY 599

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           EL   M   G + D   Y  ++  F K+    +  +L ++M + G  P   TY ++I  L
Sbjct: 600 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 198/406 (48%), Gaps = 4/406 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +++ +  L K   +   + LY++M+ CG+V     +  +I +  K  + E+   +Y  M
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           + +G  P++   N  ++   + G+ E    LFR++   +    +P++ +++ +I+G  K 
Sbjct: 536 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI---NAHGFIPDARSYSILIHGLVKA 592

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G      E+ YAM + G   +   Y  +IDG+ + G   +A +L +EM  +G  P  V Y
Sbjct: 593 GLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTY 652

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            S I  L     ++ A  +  +     I  +   YS L  G  + G + +A+ +  ++++
Sbjct: 653 GSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQ 712

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  + Y++N L++ L K+  +  A     SM      P+ ITY  LI+G C+      
Sbjct: 713 KGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK 772

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLIN 541
           A   ++ M+K+  KPN + Y ++I+GL K  ++  A  L  +     G+ D+ +YN +I 
Sbjct: 773 AFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIE 832

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G     K  +A+A+F E R  G  ++     +L++ L K  C +QA
Sbjct: 833 GLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 190/412 (46%), Gaps = 23/412 (5%)

Query: 91  SHSLESSCAIVHLL---------VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEI 141
           +  LE +C+I   +         V +    D L   G +  A S+      E +LD    
Sbjct: 452 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL-----YEKMLD---- 502

Query: 142 CKATPA--VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C   P   V+ +L+R+  + G  E  + + +++   G S  +   N ++  + K  E  +
Sbjct: 503 CGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEK 562

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L++E+ + G++ +  +++++I+ L K     E   L+Y M + G   +   +N +I+
Sbjct: 563 GRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 622

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G +  A +L  +M V       P  VT+  +I+G  K+ R++ A  +       G
Sbjct: 623 GFCKSGKVNKAYQLLEEMKVKGHP---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 679

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  NV  Y++LIDG+ + G  +EA  + +E++++GL PN   +N  +  L    ++  AL
Sbjct: 680 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 739

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M D    P+  TYSIL  GLCR     +AF    ++ +  +  +  +Y  +I+ L
Sbjct: 740 ICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 799

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            K+ N+  A  L S     G IPD  +Y  +I+G         A  ++E  +
Sbjct: 800 AKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 851



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 146/338 (43%), Gaps = 3/338 (0%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           + G TE    + +++   G      +++  +  LVK       ++L+  M   G V + +
Sbjct: 556 KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 615

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +N VI   CK  K+ +A  L   M   G  P VV +  +I+   ++  L+ A  LF + 
Sbjct: 616 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 675

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                + +  N V ++ +I+GF K+GR++ A  I   +++ G+  NV T+  L+D   + 
Sbjct: 676 ---KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 732

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
               EAL     M      PN + Y+  I+ L        A     +M    + P+  TY
Sbjct: 733 EEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY 792

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + +  GL + G + +A  L ++      + D+ SYN +I  L  +N    A  L     +
Sbjct: 793 TTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRL 852

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +G      T   L+D   K   +E A  V   +K+  K
Sbjct: 853 KGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAK 890



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 11/273 (4%)

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE-HMVGDAYSYNILINYLC---KSNNLA 446
           CP+   Y+ L   + RN      F    ++LEE  + G   S NI I  +    KS  L 
Sbjct: 124 CPE--AYNSLLMVMARN----TEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLR 177

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  ++ +M      P    Y  LI    +    +  + ++  M+++  + N+ ++ ++I
Sbjct: 178 EAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLI 237

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
               ++  +DAA SLL   +   L  D + YN  I+ +   GK+  ++  F EM++ G+ 
Sbjct: 238 RVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLM 297

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + V Y  +I  LCK     +A EL + +  +  +P    Y T++  +      +E   L
Sbjct: 298 PDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGL 357

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +     G  P    YN I++ L  ++  E+ +
Sbjct: 358 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEAL 390


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 242/437 (55%), Gaps = 6/437 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G++ S+ A+N  L  L   + +    +L   M+  G   NV T+N+++ ALC   + EEA
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 236 LSLYYR-MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           L +    M  +G  PNVV +N ++   C+ G+++ A +L   +GVM    V P+ VT N 
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERL---VGVMREGGVRPSLVTFNT 230

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++NG CK GR+E A ++   M + G+  +  +Y TL+ GY + G   EAL +  EM ++G
Sbjct: 231 VVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           ++P+ V + S IH +   G++E A+ ++  M ++ +  + FT++ L  G CRNG +  A 
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
               ++ E  +      YN+LIN  CK   +  A++L+  M  +G+ PD++TY T++ GY
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           CK G+ + A ++   M K    P+ + Y+S+I GLC++  L  A  L +   ++GL  D 
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TY TLI+G+   G + +A ++  EM   G+  + V Y++LI+ L K    ++A+ L+  
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFK 530

Query: 594 MILHGIIPDYVTYTTLV 610
           +     +PD + Y  L+
Sbjct: 531 LYYEDPVPDNIKYEALM 547



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 232/436 (53%), Gaps = 4/436 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  ++  +N V+ AL  +  L  A  L   ML+ G+ PNV  +N+++   C  G  E A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L +      M G    PN VT+N ++  FC+ G V+ AE +   M + G+  ++ T+ T+
Sbjct: 174 LGVVGD--DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTV 231

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           ++G  + G  E+A ++ DEM + GL P+ V YN+ +      G +  AL V ++M  K +
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  T++ L   +CR G +++A  L  Q+ E  +  + +++  LI+  C++  L  A  
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL 351

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
            +  M    + P ++ Y  LI+GYCK G ++ A ++   M+    KP++V Y++I++G C
Sbjct: 352 AMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYC 411

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K    D+A  L +   + G++ DAITY++LI G     ++ +A  +F +M  +G+  ++ 
Sbjct: 412 KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF 471

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  LI+  CK G  Q+A  L   MI  G++PD VTY+ L+   SK+   +E   L   +
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531

Query: 630 VLSGVSPDNQTYNAII 645
                 PDN  Y A++
Sbjct: 532 YYEDPVPDNIKYEALM 547



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 220/414 (53%), Gaps = 8/414 (1%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+++ +N ++  A     L  A +L   +  M  D V PN  T+N ++   C  G+ 
Sbjct: 115 GYAPSLLAYNAVL-LALSDASLPSARRL---LASMLRDGVAPNVYTYNILVRALCARGQR 170

Query: 306 EFA-EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           E A   +   M  AG   NV TY TL+  + R G  + A RL   M + G+ P+ V +N+
Sbjct: 171 EEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNT 230

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++ L   G +E A  +  +M  + + PD  +Y+ L  G C+ GC+ +A  +  ++ ++ 
Sbjct: 231 VVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +V D  ++  LI+ +C++ NL  A  L+  M  RGL  +  T+  LIDG+C+ G ++ A+
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDAL 350

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
              + M++   +P++V YN +ING CK   +D A+ L+   +  G+  D +TY+T+++GY
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G    AF +  +M   G+  + + Y+ LI  LC+      A EL + M+  G+ PD 
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
            TYTTL+    K  + ++ + LHD+M+  GV PD  TY+ +I  L   KSA  +
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGL--SKSARTK 522



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 228/475 (48%), Gaps = 29/475 (6%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ LV A  + G  + A  ++  ++  G   S+  +N  ++ L K   +    
Sbjct: 186 CAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDAR 245

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++ EM   G   +  ++N ++   CK   L EAL+++  M + G+ P+VV F  +I+  
Sbjct: 246 KMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA----EEIRYAMIK 317
           C+ G+LE A+ L   +G M    +  N  T   +I+GFC+ G ++ A    +E+R   I+
Sbjct: 306 CRAGNLERAVAL---VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQ 362

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
             + C    Y  LI+GY + G  +EA  L  EM  +G+ P+ V Y++ +      GD + 
Sbjct: 363 PSVVC----YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDS 418

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +   M+ K + PD  TYS L +GLC    +  A +L  ++L+  +  D ++Y  LI+
Sbjct: 419 AFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID 478

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             CK  N+  A  L   MI +G++PD++TY  LIDG  K    + A ++   +   +  P
Sbjct: 479 GHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVP 538

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-----------------LDAITYNTLI 540
           + + Y ++++  C+ A   +  +LL+     GL                 LD   Y+ LI
Sbjct: 539 DNIKYEALMH-CCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLI 597

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           +G+   G I +A +   ++   G + N      L+  L + G   +A  +++ ++
Sbjct: 598 HGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 53/375 (14%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F +L+ A  + G  E A  ++ +++ +G  ++   +   +    +   +       KEM
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
             C    +V  +N++I   CK  +++EA  L + M   G+ P+VV ++ I++  C++GD 
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A +L RKM       V+P+++T++ +I G C+  R+  A E+   M++ G+  +  TY
Sbjct: 417 DSAFELNRKM---LKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA---LF---- 380
            TLIDG+ + G+ ++AL L DEM+K+G++P+ V Y+  I  L      + A   LF    
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 381 -------------------------------------------VLSDMIDKHICPDHFTY 397
                                                      V   M+D+H   D   Y
Sbjct: 534 EDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVY 593

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           S+L  G CR G + +A   H Q+L      ++ S   L+  L +      A  ++  ++ 
Sbjct: 594 SVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLN 653

Query: 458 RGLIPDIITYGTLID 472
              + D  T   LID
Sbjct: 654 CCSLADAETSKALID 668


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/483 (31%), Positives = 254/483 (52%), Gaps = 4/483 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ ++    + G    A  ++ ++K  G S  +  +N+ +    K  E+    KL  EM
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
             CG   +V T+N ++   CK  ++E A S +  M + G+  NVV F+  ++  C+ G +
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A+KLF +M  M G  + PN VT+ C+++G CK GR++ A  +   M++ G+  NV TY
Sbjct: 316 REAMKLFAQMR-MKG--MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+DG  + G   EA  +   M + G+  N ++Y + IH  F   + E AL +LS+M D
Sbjct: 373 TVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKD 432

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K +  D   Y  L  GLC    + +A  L N++ E  +  +   Y  +++   K+   + 
Sbjct: 433 KGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESE 492

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  LL  M+  G  P+I+TY  L+DG CK G+I+ A+  +  M  +  +PN+  Y ++++
Sbjct: 493 AIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVD 552

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK+  LD A  LL      G+ LD +   +L++G+   G + +AFA+ ++M N G+ +
Sbjct: 553 GLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL 612

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +  GY   +   C     Q+ARE++  MI +GI PD V Y  L+ +  K  + EE   L 
Sbjct: 613 DLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQ 672

Query: 627 DDM 629
           ++M
Sbjct: 673 NEM 675



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 157/578 (27%), Positives = 264/578 (45%), Gaps = 42/578 (7%)

Query: 84  VGENNRFSHSLESS---CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYE 140
           V  ++  SH L SS   C   H+L   R F  +  L+  L++      L           
Sbjct: 57  VPADHLLSHPLPSSAHLCLAAHILARARLFPHSRSLLSRLLAPGHHPHL----------- 105

Query: 141 ICKATPAVFDALVRACTQIGATEGAY-DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
                 ++ D L RA   +G    A   V+  L      +S+ A    L   V    + R
Sbjct: 106 ----AASLVDLLHRAALALGPRRSALPSVVDTL------LSLLADRGLLDDAVL--ALAR 153

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             +L           N  T N ++  L +E   E    L +R+ +    PNV  FN++I+
Sbjct: 154 VRELR-------VPPNTRTCNHILLCLARERSSE----LAWRLFEQLPAPNVFTFNIMID 202

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ GDL  A  L  +M  +      P+ VT+N +I+G+ K G +E  E++   M   G
Sbjct: 203 FLCKEGDLAEARALLARMKAIGCS---PDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              +V TY  L++ + + G  E A     EM + G+M N V +++ +      G V  A+
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + + M  K + P+  TY+ L  G C+ G +  A  L N+++++ +  +  +Y +L++ L
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGL 379

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   +A A+ +   M   G+  + + Y TLI G+    N E A+ +   MK    + ++
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDV 439

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
            +Y ++I GLC    LD AKSLL      GL  + + Y  +++  F   K +EA A+  +
Sbjct: 440 SLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQK 499

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G   N V Y  L++ LCK G   +A      M+  G+ P+   YT LV    KN  
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            ++ + L D+M+  G+S DN    +++   L + + +D
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 210/457 (45%), Gaps = 39/457 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +++L+    + G  E    ++ +++  G    +  +N  ++   K   + R +
Sbjct: 225 CSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAY 284

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             + EM   G + NV TF+  + A CK   + EA+ L+ +M   G+ PN V +  +++  
Sbjct: 285 SYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGT 344

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ AL L  +M V  G  V  N VT+  +++G CK G+V  AE++   M +AGI 
Sbjct: 345 CKAGRLDDALVLTNEM-VQQG--VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIR 401

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKR---------------------------- 353
            N   Y TLI G+    +SE AL L  EM  +                            
Sbjct: 402 ANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSL 461

Query: 354 -------GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
                  GL PNNV+Y + +   F       A+ +L  M+D    P+  TY  L  GLC+
Sbjct: 462 LNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCK 521

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G + +A    N++++  +  +  +Y  L++ LCK+  L  A  LL  MI +G+  D + 
Sbjct: 522 AGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVV 581

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
             +L+DG+ K GN++ A  +   M     + +L  Y   + G C    +  A+ +L    
Sbjct: 582 CTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMI 641

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
             G+  DA+ YN LIN     G + EA  + +EM ++
Sbjct: 642 ENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMESL 678



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 188/375 (50%), Gaps = 5/375 (1%)

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V PN+ T N I+   C L R E + E+ + + +     NV T+  +ID   + G   EA 
Sbjct: 159 VPPNTRTCNHIL--LC-LAR-ERSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEAR 214

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L   M   G  P+ V YNS I      G++E    ++ +M      PD  TY+ L    
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G +++A+    ++  E ++ +  +++  ++  CK+  +  A +L + M ++G+ P+ 
Sbjct: 275 CKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNE 334

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY  L+DG CK G ++ A+ +   M +     N+V Y  +++GLCK+  +  A+ + + 
Sbjct: 335 VTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRL 394

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +R G+  + + Y TLI+G+F+      A ++ SEM++ G+ ++   Y  LI  LC    
Sbjct: 395 MERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQK 454

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A+ L+  M   G+ P+ V YT ++    K     E I L   M+ SG  P+  TY A
Sbjct: 455 LDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCA 514

Query: 644 IISPLLGEKSAEDQV 658
           ++  L    S ++ +
Sbjct: 515 LVDGLCKAGSIDEAI 529


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 252/473 (53%), Gaps = 14/473 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL--VKLNEIGRFWKLYKE 206
           FDAL+R+   +     A   +      G++ S+ A+N  L  L    L    RF      
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDASLPSARRFLS---S 142

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   NV T+N+++ ALC   +LEEA+ +   M  +G  PN V +N ++   C+ G+
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202

Query: 267 LEFA---LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           L+ A   + L R+ G     +  PN VT N ++NG CK GR+E A ++   M++ G+  +
Sbjct: 203 LDGAERVVSLMREEG-----NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y TL+ GY + G   E+L +  EM +RGL+P+ V + S IH     G++E A+ +++
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M ++ +  +  T++ L  G C+ G +  A     ++ +  +      YN LIN  CK  
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A++L+  M  + + PD++TY T+I GYCK GN++ A Q+ + M K    P+ + Y+
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           S+I GLC++  L+ A  L +   ++G+  D  TY TLI+G+   G + +A ++  EM   
Sbjct: 438 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 497

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           G+  + V Y++LIN L K    ++A  L+  +     +PD + Y  L+   SK
Sbjct: 498 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/442 (32%), Positives = 237/442 (53%), Gaps = 16/442 (3%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  +V  +N V+ AL  +  L  A      ML+ G+ PNV  +N+++   C  G LE A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG-IDCNVRTYAT 329
           + +   +G M G    PN+VT+N ++  FC+ G ++ AE +   M + G    N+ T+ +
Sbjct: 172 VGV---VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +++G  + G  E A ++ DEMV+ GL P+ V YN+ +      G +  +L V S+M  + 
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  T++ L    C+ G ++QA  L  Q+ E  +  +  ++  LI+  CK   L  A 
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             +  M   G+ P ++ Y  LI+GYCK G ++ A ++   M+    KP++V Y++II+G 
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK  +LD+A  L Q   + G+L DAITY++LI G     ++ +A  +F  M  +G+  ++
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL--- 625
             Y  LI+  CK G  ++A  L   MI  G++PD VTY+ L+   SK+   +E   L   
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 626 --HDDMVLSGVSPDNQTYNAII 645
             H+D V     PDN  Y+A++
Sbjct: 529 LYHEDPV-----PDNIKYDALM 545



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 137/415 (33%), Positives = 224/415 (53%), Gaps = 10/415 (2%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+V  +N ++  A     L  A +    +  M    V PN  T+N ++   C  GR+
Sbjct: 113 GYAPSVPAYNAVL-LALSDASLPSARRF---LSSMLRHGVAPNVYTYNILVRALCARGRL 168

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNS 364
           E A  +   M  AG   N  TY TL+  + R G  + A R+   M + G   PN V +NS
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++ L   G +EGA  V  +M+ + + PD  +Y+ L  G C+ GC+ ++  + +++ +  
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +V D  ++  LI+  CK+ NL  A  L++ M  RGL  + +T+  LIDG+CK G ++ A+
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLING 542
              E M+K   +P++V YN++ING CK   +D A+ L++   ++R+   D +TY+T+I+G
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP-DVVTYSTIISG 407

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y   G +  AF +  +M   G+  + + Y+ LI  LC+      A EL + M+  G+ PD
Sbjct: 408 YCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD 467

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
             TYTTL+    K  + E+ + LHD+M+  GV PD  TY+ +I+ L   KSA  +
Sbjct: 468 EFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL--SKSARTK 520



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 225/429 (52%), Gaps = 25/429 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     F+++V    + G  EGA  V  ++  +G +  + ++N  LS   K+  +     
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 279

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ EM   G V +V TF  +I+A CK   LE+A++L  +M + G+  N V F  +I+  C
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339

Query: 263 QVGDLE---FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           + G L+    A++  RK G+       P+ V +N +ING+CKLGR++ A E+   M    
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQ------PSVVCYNALINGYCKLGRMDLARELIREMEAKR 393

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V TY+T+I GY + G+ + A +L  +M+K+G++P+ + Y+S I  L  E  +  A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +  +M+   + PD FTY+ L  G C+ G V++A  LH++++ + ++ D  +Y++LIN L
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYG---------------TLIDGYCKGGNIEGAV 484
            KS     A +LL  +     +PD I Y                 L+ G+C  G ++ A 
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 573

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           +VY++M     K +  +Y+ +I+G C+  ++  A S  +   R G   ++ +  +L+ G 
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633

Query: 544 FINGKIAEA 552
           F  G + EA
Sbjct: 634 FEEGMVVEA 642



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 139/303 (45%), Gaps = 57/303 (18%)

Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C   P+V  ++AL+    ++G  + A ++I++++ K     +  ++  +S   K+  +  
Sbjct: 357 CGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDS 416

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            ++L ++M+  G + +  T++ +I  LC+E +L +A  L+  ML+ G+ P+   +  +I+
Sbjct: 417 AFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING--------------------- 298
             C+ G++E AL L  +M +  G  VLP+ VT++ +ING                     
Sbjct: 477 GHCKEGNVEKALSLHDEM-IRKG--VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 299 -----------------------------FCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
                                        FC  G ++ A+++  +M+      +   Y+ 
Sbjct: 534 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 593

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI G+ RGG+  +AL    +M++ G  PN+    S +  LF EG V  A   + D++   
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT-- 651

Query: 390 ICP 392
            CP
Sbjct: 652 CCP 654


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 190/649 (29%), Positives = 305/649 (46%), Gaps = 63/649 (9%)

Query: 50  ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
           +L  ++PS  + L   +    + +P   L F+ +   + +F  ++ S C ++ LL+  + 
Sbjct: 67  LLPHLSPSQFDQLFFSI--GLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKF 124

Query: 110 FDDALLLMGNLMSAN--------------SVSPLEFLEGLLDSYEICKATPAVFDALVRA 155
              A LL+  L+  N                + L  L  ++  +E  +A    FD L+  
Sbjct: 125 IPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQA----FDLLIHV 180

Query: 156 CTQIGATEG---AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
            +      G   A DV   L  KG   S+   N  LS LVK NE  +  ++++ M S G 
Sbjct: 181 YSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGA 239

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             +V +F  VI ALCK  K+E A+ L+ +M K GI PNVV +N IIN  CQ G L+ A +
Sbjct: 240 CPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFE 299

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           L  KM V     V PN  T+  +ING  KL   +    +   MI +G + NV  +  LID
Sbjct: 300 LKEKMTV---KGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLID 356

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNV-VYN---------------------------- 363
           GY + G+ E AL++ D M+ + + P +V +Y+                            
Sbjct: 357 GYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSI 416

Query: 364 ------STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
                 S +HWL  +     A      M+ ++  P     ++L  GLC++G   +A +L 
Sbjct: 417 HPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELW 476

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++LE+       + N LI+ LC +  L  A +++  M+ RGL  D ITY  LI G+C  
Sbjct: 477 FRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNE 536

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TY 536
           G +EG  ++ E M K   +P++  YN ++ GLC    LD A  L    +  GL+  I TY
Sbjct: 537 GKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTY 596

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             ++ GY    +I +   +F+E+ +  + +N + YNI+I   C+ G    A +L++ M  
Sbjct: 597 GIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 656

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            GI+P+  TY++L+         E+   L D+M   G  P+   Y A+I
Sbjct: 657 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 705



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 254/532 (47%), Gaps = 35/532 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++    Q G  + A+++ +K+ VKG   ++  +   ++ L+KLN   +   +  EM
Sbjct: 280 TYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEM 339

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G+  NV  FN +I   CK   +E AL +   M+   I P  V    ++   C+   +
Sbjct: 340 IGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQI 399

Query: 268 EFALKLFRKMGVMSGDSVLPN---SVTH------------------------------NC 294
           E A     ++ + SG S+ P+   SV H                                
Sbjct: 400 EHAENALEEI-LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTM 458

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++ G CK G+   A E+ + +++ G   +  T   LI G    G   EA R+  EM++RG
Sbjct: 459 LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERG 518

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L  + + YN+ I     EG VEG   +  +M  + I PD +TY+ L +GLC  G +  A 
Sbjct: 519 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 578

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           KL ++     ++ + ++Y I++   CK+N +   + L + ++ + +  + I Y  +I  +
Sbjct: 579 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           C+ GN+  A+Q+ ENMK     PN   Y+S+I+G+C    ++ AK L+   ++ G + + 
Sbjct: 639 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 698

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + Y  LI GY   G++  A + + EM +  I  NK  Y ++I+  CK G  ++A  L+  
Sbjct: 699 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 758

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           M   GI+PD VTY  L   F K    +   ++ D M   G+  D  TY  ++
Sbjct: 759 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 177/343 (51%), Gaps = 4/343 (1%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+  ++  G   +  T N +I+ LC   KL EA  +   ML+ G+  + + +N +I   
Sbjct: 474 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 533

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G +E   +L  +M   +   + P+  T+N ++ G C +G+++ A ++      +G+ 
Sbjct: 534 CNEGKVEGCFRLREEM---TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 590

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+ TY  +++GY +    E+   L +E++ + +  N++VYN  I      G+V  AL +
Sbjct: 591 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 650

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M  K I P+  TYS L  G+C  G V+ A  L +++ +E  V +   Y  LI   CK
Sbjct: 651 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A+     MI   + P+  TY  +IDGYCK GN+E A  +   MK+    P++V 
Sbjct: 711 LGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVT 770

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           YN + NG CK   +D A  +       GL +D ITY TL++G+
Sbjct: 771 YNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           ++VH L    R+  A      ++S N   P + L  +L    +C         L +    
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSRN-FRPSDLLLTML----VC--------GLCKDGKH 469

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           + ATE  + +++K    G   S    N  +  L    ++    ++ KEM+  G   +  T
Sbjct: 470 LEATELWFRLLEK----GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT 525

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I   C E K+E    L   M K GI P++  +N ++   C VG L+ A+KL+ +  
Sbjct: 526 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF- 584

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 ++ N  T+  ++ G+CK  R+E  E +   ++   ++ N   Y  +I  + + G
Sbjct: 585 --KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNG 642

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +   AL+L + M  +G++PN   Y+S IH +   G VE A  ++ +M  +   P+   Y+
Sbjct: 643 NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 702

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C+ G +  A     +++  ++  + ++Y ++I+  CK  N+  A  LL  M   
Sbjct: 703 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES 762

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           G++PD++TY  L +G+CK  +++ A +V + M       + + Y ++++G
Sbjct: 763 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 167/390 (42%), Gaps = 43/390 (11%)

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE---EALRLCDEMVKRGLMPNNVVYNS 364
           A ++ Y + + G   +++T   L+    +    E   E  R+  E    G  P+   + +
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE----GACPDVFSFTN 248

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I+ L   G +E A+ +   M    I P+  TY+ +  GLC+NG +  AF+L  ++  + 
Sbjct: 249 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 308

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  +  +Y  LIN L K N       +L  MI  G  P+++ +  LIDGYCK GNIEGA+
Sbjct: 309 VQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGAL 368

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-------------- 530
           ++ + M      P  V   S++ G CK   ++ A++ L+     GL              
Sbjct: 369 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 428

Query: 531 ----------------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
                                    +    L+ G   +GK  EA  ++  +   G   +K
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 488

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V  N LI+ LC  G   +A  ++K M+  G+  D +TY  L+  F      E    L ++
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           M   G+ PD  TYN ++  L      +D +
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 578


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 272/520 (52%), Gaps = 16/520 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK T   +  ++    +    + A ++ +++K +G    + ++ + +    +  +  +  
Sbjct: 117 CKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAK 176

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM+  G   +V T +++I  LCKE K+ EA  L   M++ G   ++V ++ +I   
Sbjct: 177 CLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI----K 317
           C    +  A +LF  M  +      P+++ +  ++ G C+ G +  A ++   M+    +
Sbjct: 237 CMKHRISEATRLFMSMQKLG---CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGR 293

Query: 318 AGIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
            GI C   + +Y+ +IDG  +    +EA  L  EM  +G+MP+ + Y + IH     G  
Sbjct: 294 YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKW 353

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           E A  + ++M+D  I PD  T S+L   LC+ G V +A KL   V++   + D  +   L
Sbjct: 354 EKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTL 413

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK--- 492
           +  LC  + ++ A QL   M   G +P+++T  TL+ G C+ GNI+ A+++++NM     
Sbjct: 414 VKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTS 473

Query: 493 ---VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
              +  KPN + Y+ II+GLCK    D A+ L +  + +G++ D I+Y +LI+G+  +GK
Sbjct: 474 PYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGK 533

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
             +A  +F+EM ++G+  +   +++LI+ LCK G   +A EL++VMI  G IP+ VTYTT
Sbjct: 534 WKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTT 593

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           LV     N    E  +L   M   G  PD  TY  ++  L
Sbjct: 594 LVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 633



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 139/417 (33%), Positives = 228/417 (54%), Gaps = 16/417 (3%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   +V T  ++I   CKE K+ EA  L   M++ G   ++V ++ +I   C    
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI----KAGIDC 322
           +  A +LF  M  +      P+++ +  ++ G C+ G++  A  +   M+    + GI C
Sbjct: 61  ISEATQLFMSMKKLG---CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 117

Query: 323 --NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              + +Y+ +IDG  +    +EA  L  EM  +G+MP+ + Y S IH     G  E A  
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           + ++M+D  I  D  T S+L   LC+ G V +A +L   +++   + D  +Y+ LI  LC
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK------VE 494
             + ++ A +L  SM   G  PD I YGTL+ G C+ GNI  A+Q+++ M        ++
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
            KP L+ Y+ II+GLCKD   D A+ L +  +  G++ D I+Y TLI+G+ ++GK  +A 
Sbjct: 298 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 357

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            +F+EM +VGI  +    ++LI+ LCK G   +A +L++V+I  G IPD VT TTLV
Sbjct: 358 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 260/490 (53%), Gaps = 20/490 (4%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDS---YEI-CKATPAVFDALVRACTQIGATEGAYDVIQ 170
           L+ G   + N  + L+  + +L+    Y I CK T   +  ++    +    + A ++ +
Sbjct: 267 LMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFK 326

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++K +G    + ++   +       +  +   L+ EM+  G   +V T +++I  LCK+ 
Sbjct: 327 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 386

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K+ EA  L   +++ G  P+VV    ++   C    +  A +LF KM  +     +PN V
Sbjct: 387 KVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG---CMPNVV 443

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKA----GIDC--NVRTYATLIDGYARGGSSEEAL 344
           T   ++ G C+ G ++ A E+   M+      GI+C  N  +Y+ +IDG  + G  +EA 
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  EM   G++P+ + Y S IH     G  + A ++ ++M+D  + PD  T+S+L   L
Sbjct: 504 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G V +A +L   +++   + +  +Y  L+  LC ++ ++ A QL   M   G +PD+
Sbjct: 564 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 623

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKK------VEKKPNLVIYNSIINGLCKDASLDAA 518
           +TYGTL+ G C+ GNI+ A+++++ M           KP+++ Y+ II+GLCK    D A
Sbjct: 624 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEA 683

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + L +  + +G++ + I+Y +LI+G+  +GK+ +A  +F+EM + G+ +N V Y+++I+ 
Sbjct: 684 RELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 743

Query: 578 LCKFGCYQQA 587
            CK G   +A
Sbjct: 744 FCKEGQIDKA 753



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 264/541 (48%), Gaps = 57/541 (10%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A ++++ +  +G  + I  ++  +  L   + I    +L+  M   G   +   +  ++ 
Sbjct: 29  ANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMK 88

Query: 225 ALCKECKLEEALSLYYRML----KSGIW--PNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            LC+  K+  AL L+  ML    + GI   P +V +++II+  C+    + A +LF++M 
Sbjct: 89  GLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEM- 147

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 ++P+ +++  +I+GFC+ G+ E A+ +   M+  GI  +V T + LID   + G
Sbjct: 148 --KAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEG 205

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              EA  L + M++RG + + V Y++ I  L  +  +  A  +   M      PD   Y 
Sbjct: 206 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYG 265

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEE------HMVGDAYSYNILINYLCKSNNLAAAKQLL 452
            L KGLC+ G +  A +LH ++L +             SY+I+I+ LCK      A++L 
Sbjct: 266 TLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 325

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M  +G++PD+I+Y TLI G+C  G  E A  ++  M  V  +P++   + +I+ LCK 
Sbjct: 326 KEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 385

Query: 513 ASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG-------- 563
             +  A  LL+   QR  + D +T  TL+ G  +  +I++A  +F +M+ +G        
Sbjct: 386 GKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 445

Query: 564 --------------IAV-------------------NKVGYNILINFLCKFGCYQQAREL 590
                         IA+                   N + Y+I+I+ LCK G   +AREL
Sbjct: 446 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            K M   G+IPD ++YT+L+  F ++   ++   L ++MV  GV PD  T++ +I  L  
Sbjct: 506 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565

Query: 651 E 651
           E
Sbjct: 566 E 566



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 258/530 (48%), Gaps = 86/530 (16%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L + M+  G + ++ T++ +I  LC + ++ EA  L+  M K G  P+ + +  ++   
Sbjct: 212 ELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGL 271

Query: 262 CQVGDLEFALKLFRKM-------GV-------------------------------MSGD 283
           CQ G++  AL+L ++M       G+                               M   
Sbjct: 272 CQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 331

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            ++P+ +++  +I+GFC  G+ E A+ +   M+  GI  +V T + LID   + G   EA
Sbjct: 332 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 391

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            +L + +++RG +P+ V   + +  L  +  +  A  +   M      P+  T + L KG
Sbjct: 392 NKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 451

Query: 404 LCRNGCVKQAFKLHNQVLEE------HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           LC++G +K A +LH  +L +      +   +A SY+I+I+ LCK      A++L   M  
Sbjct: 452 LCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKA 511

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G+IPD+I+Y +LI G+C+ G  + A  ++  M  +  +P++  ++ +I+ LCK+  +  
Sbjct: 512 LGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIE 571

Query: 518 AKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG------------- 563
           A  LL+   QR  + + +TY TL+ G  +N +I+EA  +F +M+ +G             
Sbjct: 572 ANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMK 631

Query: 564 -----------IAVNK-----------------VGYNILINFLCKFGCYQQARELMKVMI 595
                      + ++K                 + Y+I+I+ LCK G   +AREL K M 
Sbjct: 632 GLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMK 691

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             G+IP+ ++YT+L+  F ++   E+   L ++MV  GV  +  TY+ +I
Sbjct: 692 ALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 243/494 (49%), Gaps = 22/494 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L++   Q G    A  + Q++        I      +S+ + ++ + +  
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316

Query: 202 K------LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           +      L+KEM + G + +V ++  +I+  C   K E+A  L+  ML  GI P+V   +
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           ++I+  C+ G +  A KL     V+     +P+ VT   ++ G C   R+  A ++   M
Sbjct: 377 VLIDMLCKKGKVIEANKLLE---VVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKM 433

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR------GLMPNNVVYNSTIHWL 369
            K G   NV T ATL+ G  + G+ + AL L   M+           PN + Y+  I  L
Sbjct: 434 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G  + A  +  +M    + PD  +Y+ L  G CR+G  K A  L N++++  +  D 
Sbjct: 494 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 553

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++++LI+ LCK   +  A +LL  MI RG IP+ +TY TL+ G C    I  A Q++  
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGL---LDAITYNTLING 542
           M+K+   P++V Y +++ GLC+  ++  A    K +L  + + G     D I+Y+ +I+G
Sbjct: 614 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 673

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +G+  EA  +F EM+ +G+  N + Y  LI+  C+ G  + A+ L   M+  G+  +
Sbjct: 674 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733

Query: 603 YVTYTTLVTRFSKN 616
            VTY+ ++  F K 
Sbjct: 734 AVTYSVMIHGFCKE 747



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 162/337 (48%), Gaps = 50/337 (14%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS----GI--W 248
           + I +  +L+ +M   G + NV T   ++  LC+   ++ AL L+  ML      GI   
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN + +++II+  C+ G  + A +LF++M  +    V+P+ +++  +I+GFC+ G+ + A
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALG---VIPDVISYTSLIHGFCRSGKWKDA 537

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           + +   M+  G+  +V T++ LID   + G   EA  L + M++RG +PN V Y + +  
Sbjct: 538 KYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE----- 423
           L     +  A  +   M      PD  TY  L KGLC+ G +K A +LH ++L +     
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657

Query: 424 -HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII----------------- 465
            +   D  SY+I+I+ LCK      A++L   M   G+IP++I                 
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717

Query: 466 ------------------TYGTLIDGYCKGGNIEGAV 484
                             TY  +I G+CK G I+ A+
Sbjct: 718 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 42/310 (13%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDS---YEI-CKATPAVFDALVRACTQIGATEGAYDV 168
           A L+ G   S N    LE  + +L     Y I CK     +  ++    + G  + A ++
Sbjct: 446 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
            +++K  G    + ++ + +    +  +      L+ EMV  G   +V TF+++I  LCK
Sbjct: 506 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565

Query: 229 ECK-----------------------------------LEEALSLYYRMLKSGIWPNVVC 253
           E K                                   + EA  L+ +M K G  P+VV 
Sbjct: 566 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 625

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGD---SVLPNSVTHNCIINGFCKLGRVEFAEE 310
           +  ++   CQ G+++ AL+L +KM   +G    +  P+ ++++ II+G CK GR + A E
Sbjct: 626 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 685

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G+  NV +Y +LI G+ R G  E+A  L +EMV +G+  N V Y+  IH   
Sbjct: 686 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 745

Query: 371 AEGDVEGALF 380
            EG ++ ALF
Sbjct: 746 KEGQIDKALF 755



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%)

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M +VGI  +     +LI+  CK G   +A EL++VM+  G I D VTY+TL+        
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             E  +L   M   G  PD   Y  ++  L
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGL 90



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 41/155 (26%)

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFA 554
           +P++     +I+  CK+  +  A  LL+   QR  +LD +TY+TLI G  +  +I+EA  
Sbjct: 7   QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F  M+                   K GC                 PD + Y TL+    
Sbjct: 67  LFMSMK-------------------KLGCR----------------PDAIAYGTLMKGLC 91

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +       + LH +M+      D   Y     P L
Sbjct: 92  QTGKINIALHLHQEML-----NDTSQYGIKCKPTL 121


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/603 (28%), Positives = 275/603 (45%), Gaps = 99/603 (16%)

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK----VKGHSVSIHAWNNFLS 189
           GL   Y  C A   + D  +R        EG  D + ++K      G  +++  +N  + 
Sbjct: 40  GLKPDYNACSA---LIDGFMR--------EGDIDEVLRIKDVMVSCGIPINLITYNVLIH 88

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K  ++ +  ++ K M++ G   N  TF L+I   C+E  +  AL L   M K  + P
Sbjct: 89  GLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 148

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGV------------------------------ 279
           + V +  +IN  C   DL  A KL  KM                                
Sbjct: 149 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 208

Query: 280 --MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             MS   V P+   +N II+   K G++E A      +   G+  +  T+   I GY++ 
Sbjct: 209 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 268

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVY----------------------------------- 362
           G   EA +  DEM+  GLMPNN +Y                                   
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           ++ IH L   G V+ AL V S++ +K + PD FTYS L  G C+ G V++AF+LH+++  
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  + + YN L++ LCKS ++  A++L   M  +GL PD +TY T+IDGYCK  N+  
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 448

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           A  ++  M     +P+  +YN++++G CK+  ++ A +L +   + G    +++NTLI+G
Sbjct: 449 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDG 508

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK---------- 592
           Y  + KI EA  +F EM    I  + V Y  +I++ CK G  ++A  L K          
Sbjct: 509 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 568

Query: 593 -------VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                   M+  G+ PD VTY  ++    K  +  E  +L D++V  G+      ++ +I
Sbjct: 569 TVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 628

Query: 646 SPL 648
           + L
Sbjct: 629 TAL 631



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 261/515 (50%), Gaps = 40/515 (7%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
             ++++  G     +A +  +   ++  +I    ++   MVSCG   N+ T+N++I+ LC
Sbjct: 32  TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 91

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K  K+E+A  +   M+  G  PN   F ++I   C+  ++  AL+L  +   M   +++P
Sbjct: 92  KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDE---MEKRNLVP 148

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++V++  +ING C    +  A ++   M  +G+  NV  Y+TLI GYA  G  EEA RL 
Sbjct: 149 SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 208

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D M   G+ P+   YN+ I  L   G +E A   L ++  + + PD  T+     G  + 
Sbjct: 209 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKT 268

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL---------------------- 445
           G + +A K  +++L+  ++ +   Y +LIN   K+ NL                      
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328

Query: 446 -------------AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
                          A ++ S +  +GL+PD+ TY +LI G+CK G +E A ++++ M  
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
               PN+ IYN++++GLCK   +  A+ L       GL  D++TY+T+I+GY  +  +AE
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 448

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           AF++F EM + G+  +   YN L++  CK G  ++A  L + M+  G     +++ TL+ 
Sbjct: 449 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLID 507

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + K+C  +E  +L  +M+   + PD+ TY  +I 
Sbjct: 508 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 542



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 223/437 (51%), Gaps = 4/437 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G V N  T+ ++   LC+  ++ EA   +  M K+G+ P+    + +I+   + GD++  
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID-- 62

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            ++ R   VM    +  N +T+N +I+G CK G++E A EI   MI  G   N RT+  L
Sbjct: 63  -EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLL 121

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I+GY R  +   AL L DEM KR L+P+ V Y + I+ L    D+  A  +L  M    +
Sbjct: 122 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 181

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+   YS L  G    G +++A +L + +    +  D + YN +I+ L K+  +  A  
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
            L  +  RGL PD +T+G  I GY K G +  A + ++ M      PN  +Y  +ING  
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K  +L  A S+ +    +G+L D  T +  I+G   NG++ EA  +FSE++  G+  +  
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y+ LI+  CK G  ++A EL   M L GI P+   Y  LV    K+   +   +L D M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 630 VLSGVSPDNQTYNAIIS 646
              G+ PD+ TY+ +I 
Sbjct: 422 PEKGLEPDSVTYSTMID 438



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 250/532 (46%), Gaps = 22/532 (4%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    V+  L+      G  E A  ++  +   G +  I  +N  +S L K  ++     
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
              E+   G   +  TF   I    K  K+ EA   +  ML  G+ PN   + ++IN   
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+L  AL +FR +  +    VLP+  T +  I+G  K GRV+ A ++   + + G+  
Sbjct: 302 KAGNLMEALSIFRHLHALG---VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 358

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY++LI G+ + G  E+A  L DEM  +G+ PN  +YN+ +  L   GD++ A  + 
Sbjct: 359 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 418

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +K + PD  TYS +  G C++  V +AF L +++  + +   ++ YN L++  CK 
Sbjct: 419 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 478

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++  A  L   M+ +G     +++ TLIDGYCK   I+ A Q+++ M   +  P+ V Y
Sbjct: 479 GDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 537

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL------------------DAITYNTLINGYF 544
            ++I+  CK   ++ A  L +  Q   L+                  D +TY  +I  + 
Sbjct: 538 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHC 597

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
               + EAF +  E+   G+      +++LI  LCK     +A +L+  M   G+ P   
Sbjct: 598 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 657

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +TLV  F +    +E   + + +   G+ PD  T   +++  L +  +ED
Sbjct: 658 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSED 709



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 199/405 (49%), Gaps = 36/405 (8%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    ++PN+ T+  I  G C+  R+  A+     M K G+  +    + LIDG+ R G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +E LR+ D MV  G+  N + YN  IH L   G +E A  +L  MI     P+  T+ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L +G CR   + +A +L +++ + ++V  A SY  +IN LC   +L+ A +LL  M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L P+++ Y TLI GY   G IE A ++ + M      P++  YN+II+ L K   ++ A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN-- 576
           + L   Q  GL  DA+T+   I GY   GK+ EA   F EM + G+  N   Y +LIN  
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 577 ---------------------------------FLCKFGCYQQARELMKVMILHGIIPDY 603
                                             L K G  Q+A ++   +   G++PD 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            TY++L++ F K    E+  ELHD+M L G++P+   YNA++  L
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 207/423 (48%), Gaps = 28/423 (6%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           GNLM A S+       G+L   + C        A +    + G  + A  V  +LK KG 
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTC-------SAFIHGLLKNGRVQEALKVFSELKEKGL 356

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
              +  +++ +S   K  E+ + ++L+ EM   G   N+  +N ++  LCK   ++ A  
Sbjct: 357 VPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARK 416

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L+  M + G+ P+ V ++ +I+  C+  ++  A  LF +M       V P+S  +N +++
Sbjct: 417 LFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM---PSKGVQPHSFVYNALVH 473

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK G +E A  +   M++ G    + ++ TLIDGY +    +EA +L  EM+ + +MP
Sbjct: 474 GCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 532

Query: 358 NNVVYNSTIHWLFAEGDVEGA--LF---------------VLSDMIDKHICPDHFTYSIL 400
           ++V Y + I W    G +E A  LF               +   M+ K + PD  TY ++
Sbjct: 533 DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLV 592

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               C+   + +AFKL ++V+ + M+     +++LI  LCK  +L  A +LL  M   GL
Sbjct: 593 IYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGL 652

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P +    TL+  + + G ++ A +V+E +K +   P+      ++NG   D   + A++
Sbjct: 653 KPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARN 712

Query: 521 LLQ 523
           L++
Sbjct: 713 LIK 715



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 157/361 (43%), Gaps = 50/361 (13%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF   +L+    + G  E A+++  ++ +KG + +I  +N  +  L K  +I R  KL
Sbjct: 358 PDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKL 417

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M   G   +  T++ +I   CK   + EA SL++ M   G+ P+   +N +++  C+
Sbjct: 418 FDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCK 477

Query: 264 VGDLEFALKLFRKM-------------------------------GVMSGDSVLPNSVTH 292
            GD+E A+ LFR+M                                 M    ++P+ VT+
Sbjct: 478 EGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 537

Query: 293 NCIINGFCKLGRVEFA----EEIRY-------------AMIKAGIDCNVRTYATLIDGYA 335
             +I+  CK G++E A    +E++               M+  G+  +  TY  +I  + 
Sbjct: 538 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHC 597

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           +  +  EA +L DE+V +G++    +++  I  L    D+  A  +L +M +  + P   
Sbjct: 598 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 657

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
             S L +     G + +A ++   V    +V D  +   L+N      +   A+ L+  +
Sbjct: 658 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717

Query: 456 I 456
           +
Sbjct: 718 V 718


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 187/650 (28%), Positives = 308/650 (47%), Gaps = 79/650 (12%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWV------GENNRFSHSLESSC 98
           Q ++   E +A  + + +++R+     +  +L L+F+ WV      G  N F++S     
Sbjct: 49  QTRFSESEVLASDVAHLVLDRI-----RDVELGLKFFDWVSRGQYSGPINGFAYS----- 98

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +++ LL   R F +  +++ N M    +SP                T      +++A + 
Sbjct: 99  SLLKLLARSRVFSEMEVVLEN-MRVEEMSP----------------TREAMSIVIQAYSD 141

Query: 159 IGATEGAYDVIQ-KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY----- 212
            G  E A ++    LK   +   + A N+ L+ LVKL  I    KLY EM+         
Sbjct: 142 SGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRC 201

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V+N +T  +++  LCKE KLEE   L       G  PN++ +N +I+  C+ GD+E A  
Sbjct: 202 VDNYSTC-IMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANG 260

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI--------------------- 311
           LF ++ +      LP   T+  IINGFCK G  +  + +                     
Sbjct: 261 LFIELKL---KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIID 317

Query: 312 -RY-------------AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
            RY              MI+ G   ++ TY TLI G  R G   EA +L ++ + +GLMP
Sbjct: 318 ARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMP 377

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N   Y   IH    +G  + A   L +M ++   PD  TY  L  GL   G V  A  + 
Sbjct: 378 NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR 437

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++LE  +  DA  YNIL++ LCK   L AAK LL+ M+ + ++PD   Y TL+DG+ + 
Sbjct: 438 EKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRN 497

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITY 536
           GN++ A +++E   +    P +V YN++I G CK   + DA   + +  +R    D  TY
Sbjct: 498 GNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 557

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           +T+I+GY     +  A  MF EM  +    N V Y  LIN  C+ G   ++ ++ + M  
Sbjct: 558 STVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQA 617

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            G++P+ VTY+ L+  F K     +     ++M+++   P++ T+N +++
Sbjct: 618 CGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVN 667



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 160/603 (26%), Positives = 283/603 (46%), Gaps = 38/603 (6%)

Query: 60  NSLVNRVVSEFRK--SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLM 117
           NSL+N +V   R   + KL  E     G  +R   +  S+C +V  L    + ++   L+
Sbjct: 169 NSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNY-STCIMVKGLCKEGKLEEGRKLI 227

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
            +      +  + F   L+D Y  CK                G  E A  +  +LK+KG 
Sbjct: 228 EDRWGQGCIPNIIFYNTLIDGY--CKK---------------GDMEMANGLFIELKLKGF 270

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
             ++  +   ++   K  +     +L  EM S G   NV  +N +I A  K   + +A+ 
Sbjct: 271 LPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVE 330

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
               M++ G  P++V +N +I+ +C+ G +  A +L  +     G  ++PN  ++  +I+
Sbjct: 331 TIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQA---LGKGLMPNKFSYTPLIH 387

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
            +CK G  + A      M + G   ++ TY  L+ G    G  + AL + ++M++RG+ P
Sbjct: 388 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFP 447

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           +  +YN  +  L  +  +  A  +L++M+D+ + PD F Y+ L  G  RNG + +A KL 
Sbjct: 448 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 507

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
              +E+ M      YN +I   CK   +  A   ++ M  R L PD  TY T+IDGY K 
Sbjct: 508 ELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQ 567

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
            +++GA +++  M K++ KPN+V Y S+ING C+   L  +  + +  Q  GL+ + +TY
Sbjct: 568 HDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTY 627

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC---------YQQA 587
           + LI  +    K+ +A + F EM       N V +N L+N   K G          +Q+ 
Sbjct: 628 SILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQEN 687

Query: 588 RELMKV-----MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
           ++ M +     MI  G  P    Y +++    +       ++L + M   G  PD+ ++ 
Sbjct: 688 KQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFV 747

Query: 643 AII 645
           A++
Sbjct: 748 ALL 750



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 18/351 (5%)

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVY 362
           RVE     R AM            + +I  Y+  G  E+AL L   ++K     P+ +  
Sbjct: 121 RVEEMSPTREAM------------SIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIAC 168

Query: 363 NSTIHWLFAEGDVEGALFVLSDMID----KHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           NS ++ L   G +E A  +  +M++       C D+++  I+ KGLC+ G +++  KL  
Sbjct: 169 NSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIE 228

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
               +  + +   YN LI+  CK  ++  A  L   + ++G +P + TYG +I+G+CK G
Sbjct: 229 DRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKG 288

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYN 537
           + +   ++   M       N+ +YN+II+   K   +  A   ++     G   D +TYN
Sbjct: 289 DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYN 348

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLI+G   +GK++EA  +  +    G+  NK  Y  LI+  CK G Y +A   +  M   
Sbjct: 349 TLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTER 408

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           G  PD VTY  LV         +  + + + M+  GV PD   YN ++S L
Sbjct: 409 GHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 459



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 154/333 (46%), Gaps = 12/333 (3%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL----FV 381
            Y++L+   AR     E   + + M    + P     +  I      G VE AL    FV
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA----YSYNILIN 437
           L         PD    + L   L + G ++ A KL++++LE    GD     YS  I++ 
Sbjct: 156 LKTYT---YFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LCK   L   ++L+     +G IP+II Y TLIDGYCK G++E A  ++  +K     P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
            +  Y +IING CK     A   LL      GL ++   YNT+I+  + +G I +A    
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             M   G   + V YN LI+  C+ G   +A +L++  +  G++P+  +YT L+  + K 
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQ 392

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              +       +M   G  PD  TY A++  L+
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLV 425



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/478 (22%), Positives = 198/478 (41%), Gaps = 87/478 (18%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+ A  + G  + A + + ++  +GH   +  +   +  LV   E+     + ++M+
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 441

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +   +N+++  LCK+ KL  A  L   ML   + P+   +  +++   + G+L+
Sbjct: 442 ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLD 501

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A KLF ++ +  G +  P  V +N +I G+CK G ++ A      M K  +  +  TY+
Sbjct: 502 EARKLF-ELTIEKGMN--PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYS 558

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDGY +    + A ++  EMVK    PN V Y S I+    +GD+  +L +  +M   
Sbjct: 559 TVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQAC 618

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY---------- 438
            + P+  TYSIL    C+   +  A     ++L    V +  ++N L+N           
Sbjct: 619 GLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAIS 678

Query: 439 ---------------------------------------LCKSNNLAAAKQLLSSMIVRG 459
                                                  LC+      A QL + M  +G
Sbjct: 679 EKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKG 738

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            IPD +++  L+ G C    +EG  + ++N+                       S +  +
Sbjct: 739 CIPDSVSFVALLHGVC----LEGRSKEWKNI----------------------VSCNLNE 772

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LQ         A+ Y+++++ Y   G  +EA  +   M     + +KVG NI ++F
Sbjct: 773 RELQI--------AVNYSSILDQYLPQG-TSEASVILQTMFEECQSHSKVGDNIQVSF 821



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 36/339 (10%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVI 169
           D  +  GNL  A  +  L   +G+          P +  ++A+++   + G  + A   I
Sbjct: 492 DGFIRNGNLDEARKLFELTIEKGM---------NPGIVGYNAMIKGYCKFGMMKDAMACI 542

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            ++K +  +     ++  +   VK +++    K+++EMV      NV T+  +I   C++
Sbjct: 543 NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRK 602

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
             L  +L ++  M   G+ PNVV ++++I   C+   L  A   F +M +   +  +PN 
Sbjct: 603 GDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLM---NKCVPND 659

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT N ++NGF K G    +E+        G +      +  ++ + R             
Sbjct: 660 VTFNYLVNGFSKNGTRAISEK--------GNEFQENKQSMFLNFFGR------------- 698

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  G  P +  YNS +  L   G    AL + + M  K   PD  ++  L  G+C  G 
Sbjct: 699 MISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758

Query: 410 VKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAA 447
            K+   + +  L E  +  A +Y +IL  YL +  + A+
Sbjct: 759 SKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEAS 797


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 260/502 (51%), Gaps = 4/502 (0%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P VFD L+R  TQ      A++  + +      +   A N  L+ L +          Y+
Sbjct: 86  PRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYR 145

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            + S     N  T N++++  CK  + ++  ++   M K  ++P+VV  N++++   + G
Sbjct: 146 LVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 205

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D E A+ L   +  M    + P  VT+N ++ G C+ G  + A E+   M   G+  +VR
Sbjct: 206 DAEAAMAL---VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           ++  LI G+ R G  EEAL++  EM  RG+ P+ V ++  I      G ++ A+  L +M
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD   Y+++  G CR G +  A ++ ++++    + D  +YN L+N LCK   L
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A+ LL+ M  RG+ PD+ T+ TLI GYC  G ++ A+Q+++ M     +P++V YN++
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442

Query: 506 INGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+G+C+   LD A  L      R    + +TY+ LI+ +   G++ +AF    EM N GI
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 502

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N + YN +I   C+ G   + ++ ++ M+++ + PD +TY TL+  + K     +  +
Sbjct: 503 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 562

Query: 625 LHDDMVLSGVSPDNQTYNAIIS 646
           L + M    V PD  TYN +I+
Sbjct: 563 LLNMMEKEKVQPDVVTYNMLIN 584



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 237/443 (53%), Gaps = 14/443 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   MVS G    + T+N V+  LC+    ++A  ++  M   G+ P+V  F ++I   C
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA----EEIR-YAMIK 317
           +VG++E ALK++++M       + P+ V+ +C+I  F + G+++ A     E+R + ++ 
Sbjct: 273 RVGEIEEALKIYKEM---RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 329

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+      Y  +I G+ R G   +ALR+ DEMV  G +P+ V YN+ ++ L  E  +  
Sbjct: 330 DGV-----IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 384

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +L++M ++ + PD  T++ L  G C  G + +A +L + +L + +  D  +YN LI+
Sbjct: 385 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 444

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            +C+  +L  A  L   M  R + P+ +TY  LID +C+ G +E A    + M      P
Sbjct: 445 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 504

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           N++ YNSII G C+  ++   +  LQ      +  D ITYNTLI+GY    K+ +AF + 
Sbjct: 505 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M    +  + V YN+LIN     G  Q+A  + + M   GI PD  TY +++      
Sbjct: 565 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 624

Query: 617 CSPEEVIELHDDMVLSGVSPDNQ 639
            + +E  +LHD+M+  G +PD++
Sbjct: 625 GNSKEAFQLHDEMLQRGFAPDDK 647



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 244/486 (50%), Gaps = 37/486 (7%)

Query: 119 NLMSANSVSPLEF--LEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKV 174
           N+M  N    LEF  ++ ++   E     P V   + +V A  + G  E A  ++  +  
Sbjct: 160 NIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 219

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG    I  +N+ L  L +     + W+++KEM   G   +V +F ++I   C+  ++EE
Sbjct: 220 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 279

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----------------- 277
           AL +Y  M   GI P++V F+ +I    + G ++ A+   R+M                 
Sbjct: 280 ALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIG 339

Query: 278 -----GVMS----------GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                G+MS          G   LP+ VT+N ++NG CK  R+  AE +   M + G+  
Sbjct: 340 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 399

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ T+ TLI GY   G  ++AL+L D M+ + L P+ V YN+ I  +  +GD++ A  + 
Sbjct: 400 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM  + I P+H TYSIL    C  G V+ AF   ++++ + ++ +  +YN +I   C+S
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N++  ++ L  M+V  + PD+ITY TLI GY K   +  A ++   M+K + +P++V Y
Sbjct: 520 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 579

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +ING     ++  A  + +     G+  D  TY ++ING+   G   EAF +  EM  
Sbjct: 580 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 639

Query: 562 VGIAVN 567
            G A +
Sbjct: 640 RGFAPD 645



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 222/474 (46%), Gaps = 39/474 (8%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L+I    +  K  EA   +  +L   +       N ++    + G    A   +R   
Sbjct: 89  FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRL-- 146

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           V S +S + N+ T N +++ +CK    +  + +   M K  +  +V T+  ++D   R G
Sbjct: 147 VFSSNSEV-NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 205

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +E A+ L D MV +GL P  V YNS +  L   G  + A  V  +M D  + PD  +++
Sbjct: 206 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 265

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL  G CR G +++A K++ ++    +  D  S++ LI    +   +  A   L  M   
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL+PD + Y  +I G+C+ G +  A++V + M      P++V YN+++NGLCK+  L  A
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385

Query: 519 KSLLQASQRIGLL------------------------------------DAITYNTLING 542
           + LL   +  G+                                     D +TYNTLI+G
Sbjct: 386 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 445

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G + +A  ++ +M +  I  N V Y+ILI+  C+ G  + A   +  MI  GI+P+
Sbjct: 446 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 505

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +TY +++  + ++ +  +  +    M+++ VSPD  TYN +I   + E    D
Sbjct: 506 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 559


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 267/511 (52%), Gaps = 7/511 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++      G  + AY ++++ K KG   S+ A+N  L+ L K   +    ++++EM
Sbjct: 92  AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 151

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                V NV T+N++I  LC+E KL  AL +   M ++G++PNV+  N++I+  C+   L
Sbjct: 152 KR-DAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 210

Query: 268 EFALKLFRKMGVMSGDSV-LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           E A  +F  M     D V  PN+VT + +I+G  K GRV+ A  +   M+  G       
Sbjct: 211 EEACSIFEGMD----DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 266

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LI  + + G  E+  ++  EMV  G  P+  + N+ +  +F  G+ E    +  ++ 
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 326

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                PD  +YSIL  GL + G   + ++L   + E+  V D ++YN +I+  CKS  + 
Sbjct: 327 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A QLL  M V+G  P ++TYG++IDG  K   ++ A  ++E  K    K N+V+Y+S+I
Sbjct: 387 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G  K   +D A  +++   + GL   + T+N L++      +I EA   F  M+++   
Sbjct: 447 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 506

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N++ Y+ILIN LC+   + +A    + M   G+ P+ +TYTT+++  +K  +  E   L
Sbjct: 507 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                 +G  PD+ +YNA+I  L     A D
Sbjct: 567 FSRFKANGGIPDSASYNAMIEGLSSANKAMD 597



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 198/405 (48%), Gaps = 4/405 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +++ +  L K   +   + LY++M+ CG+V     +  +I +  K  + E+   +Y  M+
Sbjct: 232 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 291

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
            +G  P++   N  ++   + G+ E    LFR++   +    +P++ +++ +I+G  K G
Sbjct: 292 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREI---NAHGFIPDARSYSILIHGLVKAG 348

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
                 E+ YAM + G   +   Y  +IDG+ + G   +A +L +EM  +G  P  V Y 
Sbjct: 349 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 408

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L     ++ A  +  +     I  +   YS L  G  + G + +A+ +  +++++
Sbjct: 409 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 468

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  + Y++N L++ L K+  +  A     SM      P+ ITY  LI+G C+      A
Sbjct: 469 GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKA 528

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLING 542
              ++ M+K+  KPN + Y ++I+GL K  ++  A  L  +     G+ D+ +YN +I G
Sbjct: 529 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEG 588

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
                K  +A+A+F E R  G  ++     +L++ L K  C +QA
Sbjct: 589 LSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 190/412 (46%), Gaps = 23/412 (5%)

Query: 91  SHSLESSCAIVHLL---------VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEI 141
           +  LE +C+I   +         V +    D L   G +  A S+      E +LD    
Sbjct: 207 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL-----YEKMLD---- 257

Query: 142 CKATPA--VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C   P   V+ +L+R+  + G  E  + + +++   G S  +   N ++  + K  E  +
Sbjct: 258 CGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEK 317

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L++E+ + G++ +  +++++I+ L K     E   L+Y M + G   +   +N +I+
Sbjct: 318 GRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 377

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G +  A +L  +M V       P  VT+  +I+G  K+ R++ A  +       G
Sbjct: 378 GFCKSGKVNKAYQLLEEMKVKGHP---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 434

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  NV  Y++LIDG+ + G  +EA  + +E++++GL PN   +N  +  L    ++  AL
Sbjct: 435 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 494

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M D    P+  TYSIL  GLCR     +AF    ++ +  +  +  +Y  +I+ L
Sbjct: 495 ICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGL 554

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            K+ N+  A  L S     G IPD  +Y  +I+G         A  ++E  +
Sbjct: 555 AKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 606



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 2/235 (0%)

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+   + +A +L  Q+ +   V  AY+YN +I     +     A  LL     +G IP 
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           +I Y  ++    K   +E A++++E MK+ +  PN+  YN +I+ LC++  L+AA  +  
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAALEIRD 183

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             +R GL  + +T N +I+      K+ EA ++F  M +     N V ++ LI+ L K G
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
               A  L + M+  G +P  + YT+L+  F K    E+  +++ +MV +G SPD
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 298



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 12/258 (4%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYS-YNILIN----------YLCKSNNLAAAKQLLSSMIVR 458
           +++AF +  Q + +     A+S Y ILI            LCK+N L  A +L   +   
Sbjct: 26  LREAFDII-QTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQN 84

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
             +P    Y T+I GY   G  + A  + E  K     P+++ YN I+  L K   ++ A
Sbjct: 85  RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 144

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             + +  +R  + +  TYN LI+     GK+  A  +  +M   G+  N +  NI+I+ L
Sbjct: 145 LRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRL 204

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK    ++A  + + M      P+ VT+++L+    K    ++   L++ M+  G  P  
Sbjct: 205 CKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGA 264

Query: 639 QTYNAIISPLLGEKSAED 656
             Y ++I         ED
Sbjct: 265 IVYTSLIRSFFKCGRKED 282


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 260/502 (51%), Gaps = 4/502 (0%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P VFD L+R  TQ      A++  + +      +   A N  L+ L +          Y+
Sbjct: 25  PRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYR 84

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            + S     N  T N++++  CK  + ++  ++   M K  ++P+VV  N++++   + G
Sbjct: 85  LVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 144

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D E A+ L   +  M    + P  VT+N ++ G C+ G  + A E+   M   G+  +VR
Sbjct: 145 DAEAAMAL---VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           ++  LI G+ R G  EEAL++  EM  RG+ P+ V ++  I      G ++ A+  L +M
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD   Y+++  G CR G +  A ++ ++++    + D  +YN L+N LCK   L
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A+ LL+ M  RG+ PD+ T+ TLI GYC  G ++ A+Q+++ M     +P++V YN++
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381

Query: 506 INGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+G+C+   LD A  L      R    + +TY+ LI+ +   G++ +AF    EM N GI
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 441

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N + YN +I   C+ G   + ++ ++ M+++ + PD +TY TL+  + K     +  +
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 501

Query: 625 LHDDMVLSGVSPDNQTYNAIIS 646
           L + M    V PD  TYN +I+
Sbjct: 502 LLNMMEKEKVQPDVVTYNMLIN 523



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 232/437 (53%), Gaps = 14/437 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   MVS G    + T+N V+  LC+    ++A  ++  M   G+ P+V  F ++I   C
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA----EEIR-YAMIK 317
           +VG++E ALK++++M       + P+ V+ +C+I  F + G+++ A     E+R + ++ 
Sbjct: 212 RVGEIEEALKIYKEM---RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+      Y  +I G+ R G   +ALR+ DEMV  G +P+ V YN+ ++ L  E  +  
Sbjct: 269 DGV-----IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 323

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +L++M ++ + PD  T++ L  G C  G + +A +L + +L + +  D  +YN LI+
Sbjct: 324 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 383

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            +C+  +L  A  L   M  R + P+ +TY  LID +C+ G +E A    + M      P
Sbjct: 384 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 443

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           N++ YNSII G C+  ++   +  LQ      +  D ITYNTLI+GY    K+ +AF + 
Sbjct: 444 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M    +  + V YN+LIN     G  Q+A  + + M   GI PD  TY +++      
Sbjct: 504 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 563

Query: 617 CSPEEVIELHDDMVLSG 633
            + +E  +LHD+M+  G
Sbjct: 564 GNSKEAFQLHDEMLQRG 580



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 242/482 (50%), Gaps = 37/482 (7%)

Query: 119 NLMSANSVSPLEF--LEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKV 174
           N+M  N    LEF  ++ ++   E     P V   + +V A  + G  E A  ++  +  
Sbjct: 99  NIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVS 158

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG    I  +N+ L  L +     + W+++KEM   G   +V +F ++I   C+  ++EE
Sbjct: 159 KGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE 218

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----------------- 277
           AL +Y  M   GI P++V F+ +I    + G ++ A+   R+M                 
Sbjct: 219 ALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIG 278

Query: 278 -----GVMS----------GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                G+MS          G   LP+ VT+N ++NG CK  R+  AE +   M + G+  
Sbjct: 279 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 338

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ T+ TLI GY   G  ++AL+L D M+ + L P+ V YN+ I  +  +GD++ A  + 
Sbjct: 339 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 398

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM  + I P+H TYSIL    C  G V+ AF   ++++ + ++ +  +YN +I   C+S
Sbjct: 399 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 458

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N++  ++ L  M+V  + PD+ITY TLI GY K   +  A ++   M+K + +P++V Y
Sbjct: 459 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 518

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +ING     ++  A  + +     G+  D  TY ++ING+   G   EAF +  EM  
Sbjct: 519 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 578

Query: 562 VG 563
            G
Sbjct: 579 RG 580



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 222/474 (46%), Gaps = 39/474 (8%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L+I    +  K  EA   +  +L   +       N ++    + G    A   +R   
Sbjct: 28  FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRL-- 85

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           V S +S + N+ T N +++ +CK    +  + +   M K  +  +V T+  ++D   R G
Sbjct: 86  VFSSNSEV-NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 144

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +E A+ L D MV +GL P  V YNS +  L   G  + A  V  +M D  + PD  +++
Sbjct: 145 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 204

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL  G CR G +++A K++ ++    +  D  S++ LI    +   +  A   L  M   
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL+PD + Y  +I G+C+ G +  A++V + M      P++V YN+++NGLCK+  L  A
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324

Query: 519 KSLLQASQRIGLL------------------------------------DAITYNTLING 542
           + LL   +  G+                                     D +TYNTLI+G
Sbjct: 325 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 384

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G + +A  ++ +M +  I  N V Y+ILI+  C+ G  + A   +  MI  GI+P+
Sbjct: 385 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 444

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +TY +++  + ++ +  +  +    M+++ VSPD  TYN +I   + E    D
Sbjct: 445 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 498


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 279/525 (53%), Gaps = 7/525 (1%)

Query: 135 LLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L +  ++ ++ P V+  + ++      G  + AY ++++ K KG   S+ A+N  L+ L 
Sbjct: 330 LFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLG 389

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +  ++    +++ EM       N+ T+N++I  LCK  +LE AL +   M ++G++PN++
Sbjct: 390 RKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM 448

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             N++I+  C+   L+ A  +F  +G +      P+S T   +I+G  + GRV+ A  + 
Sbjct: 449 TVNIMIDRLCKAQKLDEACSIF--LG-LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLY 505

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M+ +    NV  Y +LI  + + G  E+  ++  EMV RG  P+ ++ NS +  +F  
Sbjct: 506 EKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKA 565

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G+VE    +  ++  + + PD  +YSIL  GL + G  ++ +KL  ++ E+ +  D  +Y
Sbjct: 566 GEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAY 625

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N +I+  CKS  +  A QLL  M  +GL P ++TYG+++DG  K   ++ A  ++E  K 
Sbjct: 626 NTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 685

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
           +    N+VIY+S+I+G  K   +D A  +L+   + GL  ++ T+N L++      +I E
Sbjct: 686 IGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A   F  M+N+  + N + Y+I+IN LC    + +A    + M   G+ P+ +TYTT++ 
Sbjct: 746 AQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +K  +  E   L D    SG  PD+  YNA+I  L     A D
Sbjct: 806 GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMD 850



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 217/453 (47%), Gaps = 25/453 (5%)

Query: 63  VNRVVSEFRKSPKLALEFYTWVGENNRF-SHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
           VN ++    K+ KL      ++G +++  S    + C+++  L    R DDA  L     
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSL----- 504

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
                      E +LDS +I      V+ +L++   + G  E  + + +++  +G S  +
Sbjct: 505 ----------YEKMLDSDQI--PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDL 552

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
              N+++  + K  E+ +   L++E+ + G V +V +++++I+ L K     E   L+Y 
Sbjct: 553 MLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYE 612

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M + G+  +V+ +N +I+  C+ G ++ A +L  +M       + P  VT+  +++G  K
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT---KGLQPTVVTYGSVVDGLAK 669

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           + R++ A  +       G+D NV  Y++LIDG+ + G  +EA  + +E++++GL PN+  
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT 729

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +  L    +++ A     +M +    P+  TYSI+  GLC      +AF    ++ 
Sbjct: 730 WNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQ 789

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           ++ +  +  +Y  +I  L K+ N+  A+ L       G +PD   Y  +I+G        
Sbjct: 790 KQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAM 849

Query: 482 GAVQVYENMK----KVEKKPNLVIYNSIINGLC 510
            A  V+E  +    +V  K  +V+ +++    C
Sbjct: 850 DAYIVFEETRLKGCRVNSKTCVVLLDALHKADC 882



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 198/415 (47%), Gaps = 7/415 (1%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRF---WKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           H V       F S +  L   GR    + LY++M+    + NV  +  +I    K  + E
Sbjct: 475 HKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKE 534

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +   +Y  M+  G  P+++  N  ++   + G++E    LF ++       ++P+  +++
Sbjct: 535 DGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI---KAQGLVPDVRSYS 591

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I+G  K G      ++ Y M + G+  +V  Y T+IDG+ + G  ++A +L +EM  +
Sbjct: 592 ILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK 651

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           GL P  V Y S +  L     ++ A  +  +     +  +   YS L  G  + G + +A
Sbjct: 652 GLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEA 711

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           + +  +++++ +  ++Y++N L++ L K+  +  A+    +M      P+ +TY  +I+G
Sbjct: 712 YLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMING 771

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLD 532
            C       A   ++ M+K   KPN + Y ++I GL K  ++  A+ L    +  G + D
Sbjct: 772 LCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPD 831

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           +  YN +I G     K  +A+ +F E R  G  VN     +L++ L K  C +QA
Sbjct: 832 SACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 37/348 (10%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y TLI   +     +  L L  +M + G   N  ++ + +     EG ++ AL +L +M
Sbjct: 205 AYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEM 264

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                  D   Y++      + G V  A+K  +++  + +V D  +Y  LI  LCK+  L
Sbjct: 265 KSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRL 324

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGY------------------------------- 474
             A +L   + +   +P +  Y T+I GY                               
Sbjct: 325 DEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCI 384

Query: 475 --CKG--GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
             C G  G +E A+++++ M++ +  PNL  YN +I+ LCK   L+AA  +    +  GL
Sbjct: 385 LTCLGRKGKVEEALRIHDEMRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGL 443

Query: 531 LDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
              I T N +I+      K+ EA ++F  + +   + +   +  LI+ L + G    A  
Sbjct: 444 FPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYS 503

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L + M+    IP+ V YT+L+  F K    E+  +++ +MV  G SPD
Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 136/329 (41%), Gaps = 34/329 (10%)

Query: 337 GGSSEEALRLCDEM--------VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           G   EEAL + DEM        V + L   NV +    ++ + E   + A          
Sbjct: 84  GPDVEEALNVFDEMSQPEVIVGVMKRLKDVNVAFQ---YFRWVERKTQQA---------- 130

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV-GDAYSYNI---LINYLCKSNN 444
           H CP+ +   ++     RN           Q+LEE  V G   S ++   L+    KS+ 
Sbjct: 131 H-CPEVYNAFLMVMARTRN------LDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHK 183

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A  ++  M      P    Y TLI         +  + ++  M+++  + N+ ++ +
Sbjct: 184 LKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTT 243

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           ++    ++  +DAA SLL   +      D + YN  I+ +   GK+  A+  F EM+  G
Sbjct: 244 LVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG 303

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V Y  LI  LCK     +A EL + + L+  +P    Y T++  +      +E  
Sbjct: 304 LVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAY 363

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            L +     G  P    YN I++  LG K
Sbjct: 364 SLLERQKRKGCIPSVIAYNCILT-CLGRK 391


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 171/615 (27%), Positives = 290/615 (47%), Gaps = 75/615 (12%)

Query: 79  EFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDS 138
           +FY        F HS  S   + H+L   RRF D  L++  ++     S +         
Sbjct: 48  DFYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVASRM--------- 98

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
                    V DAL               V+ K+K +    SI  +N+ L +L       
Sbjct: 99  ---------VHDALF--------------VLVKMKEQNLRPSIQTYNSLLYNL---RHTD 132

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL---------------------- 236
             W +Y ++   G  ++  T ++++  LC + +  +A+                      
Sbjct: 133 IMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIM 192

Query: 237 -------------SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
                        S +  MLK GI P+   +N++I+     G +E AL+L   M      
Sbjct: 193 SRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDM---EKQ 249

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEE 342
            + P+ VT+  +  GF  LG +  A EI   M+   G+  ++ TY  LI G+ + G+ EE
Sbjct: 250 GLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEE 309

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           ALRL  +++  G   N ++Y+  +  L   G V+ AL +L +M   ++ PD  TYSIL  
Sbjct: 310 ALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIH 369

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLC+ G V+QA +L+ ++    +  ++++++ ++  LC+   L+ A+    S+I+  L P
Sbjct: 370 GLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRP 429

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D+  Y  +IDGY K G++E AV++Y+ ++     P++V +NS+I G CK+  +  A+ LL
Sbjct: 430 DVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLL 489

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           ++ +  GL   A+TY TL+N Y   G I +   +  EM    I    V Y ++I  LCK 
Sbjct: 490 ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQ 549

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
              +++ +L++ M   G+ PD +TY T++  F K     +  EL DDM++  + P   TY
Sbjct: 550 RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATY 609

Query: 642 NAIISPLLGEKSAED 656
           N +I  L      ED
Sbjct: 610 NVLIDGLCRYGDVED 624



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 243/484 (50%), Gaps = 11/484 (2%)

Query: 159 IGATEGAYDVIQK-LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +G   GA ++IQK L  +G    +  +   +    ++  I    +L ++++S G+  NV 
Sbjct: 268 LGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVI 327

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +++++ +LCK  +++EAL L Y M  + + P++V ++++I+  C+ G ++ A++L+++M
Sbjct: 328 LYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                + + PNS  H+ I+ G C+ G +  A     ++I + +  +V  Y  +IDGY + 
Sbjct: 388 CF---NRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKL 444

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  EEA+RL   +  + + P+ V +NS I+       V  A  +L  +    + P   TY
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTY 504

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLE---EHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + L    C  G +    KLH  +LE   + +     +Y ++I  LCK   L  + QLL  
Sbjct: 505 TTLMNAYCEEGNIN---KLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  +GL PD ITY T+I  +CK  ++  A ++ ++M     +P    YN +I+GLC+   
Sbjct: 562 MRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGD 621

Query: 515 L-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           + DA + L+    R   L  + Y T+I  + + G    A  +F +M   G  V+   Y+ 
Sbjct: 622 VEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSA 681

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +IN LCK     +A+    +M+  G+ PD   +  ++  F +      V EL   M+  G
Sbjct: 682 VINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFG 741

Query: 634 VSPD 637
           +  D
Sbjct: 742 LLHD 745



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL-SHLVKLNEIGRFW 201
           + TPA ++ L+    + G  E A  V+  L+ +  +++  A+   + +H VK  +  R  
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVK-GDAQRAV 661

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++ +MV  G+  ++  ++ VI  LCK C + EA   +  ML  G+ P+   F M++N  
Sbjct: 662 KVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAF 721

Query: 262 CQVGDLEFALKLFRKM 277
            + G +    +L   M
Sbjct: 722 HRAGHVHSVFELLAVM 737


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 241/478 (50%), Gaps = 4/478 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G    A D+ QKL   G + S  A+ + +  L   N      +L+ +M 
Sbjct: 13  YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +  T+N++I A CK   LEEA  L  +M++ G  P+VV +N +++  C+ G +E
Sbjct: 73  RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL LF +M  +      PN  +HN II G C+  +++ A ++ + M    I  +  +Y 
Sbjct: 133 EALLLFNEMERL---GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LIDG A+ G   EA +L   M+  G+ P+ V YN  IH +     ++ AL +   M  K
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P  FT++IL    C+ G + +AF+L  ++ ++  V D  +Y+ LI+ LC    +  A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           + LL  M+ R   P ++T  TLI G CK G I+ A +V + M    + P++V YN++++G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C+    + A+ LL      GL  + +TY  L++G     ++ EA  +F++M++ G A N
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
              Y  LI   C  G      +L   M+  GI PD+V Y TL     K+      +E+
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/429 (33%), Positives = 235/429 (54%), Gaps = 4/429 (0%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           ++ ++I  L K  KL +A  L+ ++L SG+ P+ V +  +I+  C     + A +LF  M
Sbjct: 12  SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
              +     P+ VT+N II+  CK G +E A ++   MI+ G   +V TY T++DG  + 
Sbjct: 72  ---NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  EEAL L +EM + G  PN   +N+ I  L  +  ++ A  V  +M  + I PD ++Y
Sbjct: 129 GRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSY 188

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
            IL  GL + G + +A+KL  ++L+  +   A +YN++I+ +C +  L  A +L  SM  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           +G  P   T+  LID +CK G ++ A ++ + M      P++V Y+++I+GLC  A +D 
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 518 AKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+ LL+   +R      +T NTLI+G    G+I EA  +   M + G + + V YN L++
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C+ G  ++AREL+  M+  G+ P+ VTYT LV+   K     E   +   M  SG +P
Sbjct: 369 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428

Query: 637 DNQTYNAII 645
           +  TY A+I
Sbjct: 429 NLFTYTALI 437



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 243/475 (51%), Gaps = 6/475 (1%)

Query: 177 HSVSIHAWNN--FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            +VS  +W+    +  L K  ++     L+++++  G   +   +  +I+ LC     ++
Sbjct: 4   RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L+  M + G  P+ V +N+II+ +C+ G LE A  L +KM     D  +P+ VT+N 
Sbjct: 64  ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKM---IEDGHVPDVVTYNT 120

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +++G CK GRVE A  +   M + G   N R++ T+I G  +    ++A ++  EM  R 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P++  Y   I  L   G +  A  +   M+D  I P   TY+++  G+C    + +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L   +  +      +++NILI+  CK   +  A +LL  M   G +PD++TY TLI G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           C    ++ A  + E+M K + KP +V  N++I+GLCK   +  A+ +L A    G   D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYNTL++G+   G+   A  + S+M   G+A N V Y  L++ LCK     +A  +   
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           M   G  P+  TYT L+  F      +  ++L  +MV +G+SPD+  Y  + + L
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 243/521 (46%), Gaps = 23/521 (4%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +++H L     FDDA  L  ++                 +   C  +P  ++ ++ A  +
Sbjct: 50  SLIHGLCMANSFDDARELFADM-----------------NRRGCPPSPVTYNVIIDASCK 92

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A D+I+K+   GH   +  +N  +  L K   +     L+ EM   G   N  +
Sbjct: 93  RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRS 152

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            N +I  LC++ K+++A  +++ M    I P+   + ++I+   + G L  A KLFR+M 
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM- 211

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           + SG  + P++VT+N +I+G C    ++ A E+  +M   G   +  T+  LID + + G
Sbjct: 212 LDSG--ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             +EA RL   M   G +P+ V Y++ I  L +   V+ A  +L DM+ +   P   T +
Sbjct: 270 KMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC+ G +K+A ++ + ++      D  +YN L++  C++     A++LLS M+ R
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL P+++TY  L+ G CK   +  A  V+  MK     PNL  Y ++I G C    +D  
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV--GIAVNKVGYNILI 575
             L       G+  D + Y TL      +G+ A A  +  E R      A     Y   +
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 509

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + L   G  + A   ++ M+  G +P      +LV    K+
Sbjct: 510 DGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS 550



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 214/408 (52%), Gaps = 4/408 (0%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M +  + P+   + ++I+   + G L  A  LF+K+ + SG  V P++V +  +I+G C 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKL-LHSG--VTPSTVAYTSLIHGLCM 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
               + A E+   M + G   +  TY  +ID   + G  EEA  L  +M++ G +P+ V 
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ +  L   G VE AL + ++M      P+  +++ +  GLC+   + QA ++ +++ 
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D++SY ILI+ L K+  L  A +L   M+  G+ P  +TY  +I G C    ++
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLI 540
            A++++++M+    +P+   +N +I+  CK   +D A  LL+     G + D +TY+TLI
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G     ++ +A  +  +M         V  N LI+ LCK G  ++ARE++  M+  G  
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           PD VTY TLV    +    E   EL  DMV  G++P+  TY A++S L
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 175/378 (46%), Gaps = 40/378 (10%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           ++   +  L K  ++   +KL++ M+  G   +  T+N+VI+ +C    L+EAL L+  M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              G  P+   FN++I+  C+ G ++ A +L ++M   + D  +P+ VT++ +I+G C +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRM---TDDGHVPDVVTYSTLISGLCSI 303

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
            RV+ A  +   M+K      V T  TLI G  + G  +EA  + D MV  G  P+ V Y
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ +H     G  E A  +LSDM+ + + P+  TY+ L  GLC+   + +A  +  Q+  
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL------------ 470
                + ++Y  LI   C +  +    +L   M+  G+ PD + YGTL            
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 471 -------------------------IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
                                    +DG    G +E A+    +M +  + P      S+
Sbjct: 484 ALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 506 INGLCKDASLDAAKSLLQ 523
           + GLCK      A+++L+
Sbjct: 544 VAGLCKSGQGGEARAVLE 561



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 187/441 (42%), Gaps = 64/441 (14%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA 147
           NR SH+      I+  L    + D A  +  + M A  + P  +  G+L           
Sbjct: 149 NRRSHN-----TIILGLCQQSKIDQACQVF-HEMEARDIPPDSWSYGIL----------- 191

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             D L +A    G    AY + +++   G + S   +N  +  +     +    +L+K M
Sbjct: 192 -IDGLAKA----GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   +  TFN++I A CK  K++EA  L  RM   G  P+VV ++ +I+  C +  +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L   M         P  VT N +I+G CK GR++ A E+  AM+ +G   +V TY
Sbjct: 307 DDARHLLEDM---VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL------------FAE--- 372
            TL+ G+ R G +E A  L  +MV RGL PN V Y + +  L            FA+   
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 373 --------------------GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
                               G V+G L +  +M+   I PDH  Y  L   LC++G   +
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 413 AFKL---HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           A ++     + L     GD   Y   ++ L  +  +  A   +  M+  G +P      +
Sbjct: 484 ALEILREGRESLRSEAWGDEV-YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCAS 542

Query: 470 LIDGYCKGGNIEGAVQVYENM 490
           L+ G CK G    A  V E +
Sbjct: 543 LVAGLCKSGQGGEARAVLEEI 563



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 55/341 (16%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ +   F+ L+ A  + G  + A+ +++++   GH   +  ++  +S L  +  +    
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L ++MV       V T N +I+ LCK  +++EA  +   M+ SG  P+VV +N +++  
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G  E A +L   M V  G  + PN VT+  +++G CK  R+  A  +   M  +G  
Sbjct: 371 CRAGQTERARELLSDM-VARG--LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS----------------- 364
            N+ TY  LI G+   G  +  L+L  EMV  G+ P++VVY +                 
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 365 --------------------TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
                                +  L   G +E AL  + DM+     P     + L  GL
Sbjct: 488 LREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547

Query: 405 CRNGCVKQAFKLHNQVLE---------------EHMVGDAY 430
           C++G   +A  +  ++++               E MVG  Y
Sbjct: 548 CKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEEMVGKGY 588



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%)

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D+ +Y  LI+G    GK+ +A  +F ++ + G+  + V Y  LI+ LC    +  AREL 
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M   G  P  VTY  ++    K    EE  +L   M+  G  PD  TYN ++  L   
Sbjct: 69  ADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 652 KSAEDQV 658
              E+ +
Sbjct: 129 GRVEEAL 135


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 275/529 (51%), Gaps = 9/529 (1%)

Query: 61  SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
           SLVN+  + +   PK  L F+ ++     FSH+++S C++VH L+  R    A  L+  +
Sbjct: 79  SLVNQ--NPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFV 136

Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
           +S         +   +   +   ++  VFDAL+   T+ G    A    +  K     + 
Sbjct: 137 VSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIP 196

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
            +     L  ++K++      + Y E++  GY  NV TFN+++  LCKE K+++A  ++ 
Sbjct: 197 FNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            + K+G+ P  V FN +IN  C+ G+LE   +L  KM VM    V P+  T++ +I+G C
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRL--KM-VMEEFRVFPDVFTYSALIDGLC 313

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K  ++E A  +   M   G+  N  T+ TLI+G  + G  + AL +  +M  +GL  + V
Sbjct: 314 KECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLV 373

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +YN+ I  L   G    A   + +M  + + PD FTY+ L  G C+ G ++ A ++  ++
Sbjct: 374 LYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEM 433

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           ++E +  D  ++  +I+ LC+   +  A++ L  M+  GL PD  TY  ++DG+CK G++
Sbjct: 434 VKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDV 493

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           +   ++ + M+     P ++ YN ++NGLCK   +  A  LL A   +G++ D ITYN L
Sbjct: 494 KMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNIL 553

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           + G+  +GK+ +   + +EM   G+  +   Y  L++ L K    +Q R
Sbjct: 554 LQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLLHELSKASKDRQKR 599



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 175/354 (49%), Gaps = 1/354 (0%)

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           C++    K+     A E    ++ +G   NV T+  L++   + G  ++A  + DE+ K 
Sbjct: 202 CLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKT 261

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           GL P  V +N+ I+     G++E    +   M +  + PD FTYS L  GLC+   ++ A
Sbjct: 262 GLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDA 321

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L  ++ +  +V +  ++  LIN  CK+  +  A ++   M  +GL  D++ Y TLIDG
Sbjct: 322 NHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDG 381

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
            CKGG    A +    M K    P+   Y ++++G CK+  L+ A  + +   + G+ LD
Sbjct: 382 LCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLD 441

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            + +  +I+G   +GKI +A     EM   G+  +   Y ++++  CK G  +   +L+K
Sbjct: 442 NVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLK 501

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M   G IP  +TY  L+    K    +    L + M+  GV PD+ TYN ++ 
Sbjct: 502 EMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQ 555



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 52/105 (49%)

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A   + E+ + G   N   +N+L+N LCK G  + A+ +   +   G+ P  V++ TL+ 
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + K+ + EE   L   M    V PD  TY+A+I  L  E   ED
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLED 320


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 267/548 (48%), Gaps = 55/548 (10%)

Query: 149 FDALVR---ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           F+ L++   +C+++      +  I KL   G    +  ++  L  L   + +     L+ 
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKL---GFQPDVVTFSTLLHGLCVEDRVSEALDLFH 171

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +M       NV TF  ++  LC+E ++ EA++L  RM++ G+ PN + +  I++  C++G
Sbjct: 172 QMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227

Query: 266 DLEFALKLFRKMGVMSG---------------------------------DSVLPNSVTH 292
           D   AL L RKM  MS                                    + P+  T+
Sbjct: 228 DTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY 287

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           NC+I+GFC  GR   A+ +   M++  I+ NV TY+ LI+ Y +     EA  L DEM+ 
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG++PN + YNS I     +  ++ A  +   M  K   PD FT++ L  G C    +  
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
             +L +++ E  +V D  +YN LI+  C   +L AA  L   MI  G+ PDI+T  TL+D
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467

Query: 473 GYCKGGNIEGAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSL 521
           G C  G ++ A+++++ M+K +            +P++  YN +I+GL  +     A+ L
Sbjct: 468 GLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEEL 527

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +     G++ + ITY+++ING     ++ EA  MF  M +   + + V +N L++  CK
Sbjct: 528 YKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCK 587

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G      EL   M   GI+ D +TY TL+  F K  +    +++  +M+ SGV PD  T
Sbjct: 588 AGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTIT 647

Query: 641 YNAIISPL 648
             ++++ L
Sbjct: 648 IRSMLTVL 655



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 257/537 (47%), Gaps = 55/537 (10%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +I   E A D+   +       S+  +N  +  +V++        LY++M       +V 
Sbjct: 54  EIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVY 113

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +FN++I   C   KL  ALS + ++ K G  P+VV F+ +++  C    +  AL LF +M
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM 173

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                    PN VT   ++NG C+ GRV  A  +   M++ G+  N  TY T++DG  + 
Sbjct: 174 -------CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226

Query: 338 GSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
           G +  AL L  +M +   + PN V+Y++ I  L+ +G    A  + ++M +K I PD FT
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFT 286

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ +  G C +G   +A +L  ++LE  +  +  +Y+ LIN   K      A++L   M+
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            RG+IP+ ITY ++IDG+CK   ++ A  ++  M      P++  +N++I+G C    +D
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRID 406

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFI------------------------------ 545
               LL      GL+ D  TYNTLI+G+ +                              
Sbjct: 407 DGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 466

Query: 546 -----NGKIAEAFAMFSEMRNV-----------GIAVNKVGYNILINFLCKFGCYQQARE 589
                NGK+ +A  MF  M+             G+  +   YNILI+ L   G + +A E
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           L K M   GI+P+ +TY++++    K    +E  ++ D M     SPD  T+N ++S
Sbjct: 527 LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVS 583



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 185/373 (49%), Gaps = 14/373 (3%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++Q++  +  + ++  ++  ++  VK  +     +LY EM+  G + N  T+N +I 
Sbjct: 303 AQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMID 362

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             CK+ +L+ A  ++Y M   G  P+V  FN +I+  C    ++   +L  +M   +   
Sbjct: 363 GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEM---TETG 419

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++ ++ T+N +I+GFC +G +  A ++   MI +G+  ++ T  TL+DG    G  ++AL
Sbjct: 420 LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479

Query: 345 RLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
            +   M K            G+ P+   YN  I  L  EG    A  +  +M  + I P+
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TYS +  GLC+   + +A ++ + +  +    D  ++N L++  CK+  +    +L  
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M  RG++ D ITY TLI G+ K GNI GA+ +++ M      P+ +   S++  L    
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKE 659

Query: 514 SLDAAKSLLQASQ 526
            L  A ++L+  Q
Sbjct: 660 ELKRAVAMLEDLQ 672


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 171/622 (27%), Positives = 302/622 (48%), Gaps = 44/622 (7%)

Query: 43  LRQRKW---KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCA 99
           ++Q +W   K +  +  SL    V+RV+ E ++ PKLAL+F+ W      F  + ES C 
Sbjct: 75  IQQDQWNDPKFVRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGFCLTTESYCL 134

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSP-LEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +VH+L   R + DA   +  L+S+  + P  +  E L  +  +C     VFDAL     +
Sbjct: 135 LVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIE 194

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +G  E A     ++          + N FL  L K  +     K +++MV  G  ++V T
Sbjct: 195 LGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFT 254

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N++I  +CKE  +  A SL+++M + G+ P++V +N +I+   ++G L+ +  LF +M 
Sbjct: 255 YNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMK 314

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +  +   P+ +T+N +IN FCK  ++  A    + M  +G+  NV TY+TLID   +  
Sbjct: 315 DVGCE---PDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEH 371

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             ++A++   +M + GL PN   Y S I      G +  AL +  +M+   +  +  TY+
Sbjct: 372 MLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYT 431

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC+ G                                    +  A+ L  +MI  
Sbjct: 432 TLLDGLCKEG-----------------------------------RMMEAEDLFRAMIKA 456

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P++ TY  L+ G+ K   +E A+++ + +K+ + KP+L++Y +II GLC    L+  
Sbjct: 457 GVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEEC 516

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + ++   +  G+  +++ Y   ++ YF  GK  EA  +  EM ++G+ V  V + +LI+ 
Sbjct: 517 EFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDG 576

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTY-TTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           LCK G  ++A +    M    + P+ V   T L+    KN   E   +L D+M    + P
Sbjct: 577 LCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVP 636

Query: 637 DNQTYNAIISPLLGEKSAEDQV 658
           D   Y A+I   L  K  ++ +
Sbjct: 637 DKIAYTALIDGNLKHKDFQEAL 658



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 218/454 (48%), Gaps = 42/454 (9%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +  +++L+    ++G  + ++ + +++K  G    +  +N  ++   K  ++ + + 
Sbjct: 284 TPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFH 343

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
              EM + G   NV T++ +I ALCKE  L++A+     M + G+ PN   +  +I+  C
Sbjct: 344 FLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANC 403

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G L  ALKL  +M  +    V  N VT+  +++G CK GR+  AE++  AMIKAG+  
Sbjct: 404 KAGYLSDALKLADEMLQV---QVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTP 460

Query: 323 NVRTYATLIDGYAR-------------------------------GGSSEEALRLCD--- 348
           N++TY  L+ G+ +                               G  S+  L  C+   
Sbjct: 461 NLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVM 520

Query: 349 -EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM   G+  N+V+Y   +   F  G    AL +L +M D  +     T+ +L  GLC+ 
Sbjct: 521 SEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKK 580

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           G V++A     ++ + ++  +  +    LI+ LCK+N + AAK+L   M  + ++PD I 
Sbjct: 581 GLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIA 640

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LIDG  K  + + A+ +   M ++  + +L  Y S++ GL +   +  A+  L    
Sbjct: 641 YTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMI 700

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
             G++ D I    L+  Y+  G I EA  +  E+
Sbjct: 701 GKGIVPDEILCIRLLRKYYELGSIDEAIELHDEL 734



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 162/349 (46%), Gaps = 10/349 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +L+ A  + G    A  +  ++       ++  +   L  L K   +     L++ M
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAM 453

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N+ T+  +++   K  ++E AL L   + +  I P+++ +  II   C    L
Sbjct: 454 IKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKL 513

Query: 268 E---FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           E   F +   +  G+ +      NSV +   ++ + K G+   A  +   M   G++  +
Sbjct: 514 EECEFVMSEMKACGIRA------NSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTI 567

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV-VYNSTIHWLFAEGDVEGALFVLS 383
            T+  LIDG  + G  EEA+     M    L PNNV V  + I  L     +E A  +  
Sbjct: 568 VTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFD 627

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M DK++ PD   Y+ L  G  ++   ++A  + +++ E  M  D ++Y  L+  L + N
Sbjct: 628 EMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGN 687

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            +  A+  L+ MI +G++PD I    L+  Y + G+I+ A+++++ + K
Sbjct: 688 LVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLK 736


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 174/648 (26%), Positives = 301/648 (46%), Gaps = 83/648 (12%)

Query: 43  LRQRKW---KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCA 99
           ++Q  W   KI+     +L    V++++   R+ PKLAL+F+ W G    F H+ ES C 
Sbjct: 50  IQQDLWNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCI 109

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEF-----LEGLLDSYEICKATPAVFDALVR 154
           IVHL+   R + DA   +  ++  NS   + F      + L  +  IC +   VFD L  
Sbjct: 110 IVHLVFRARMYTDAHDTVKEVI-MNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFS 168

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
              ++G  E A +   +++            NF              +   +  SC    
Sbjct: 169 VFVELGLLEEANECFSRMR------------NF--------------RTLPKARSC---- 198

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
                N +++ L K    +     +  M+ +GI P+V  +N++I+  C+ GDLE + +LF
Sbjct: 199 -----NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLF 253

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M  M    + P+ VT+N +I+G+ K+G +E    +   M   G   ++ TY  LI+ Y
Sbjct: 254 VQMREMG---LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCY 310

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            +      A     EM   GL PN V Y++ I     EG ++GA+ +L DM    + P+ 
Sbjct: 311 CKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNE 370

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           FTY+ L    C+ G + +A+KL N +L+  +  +  +Y  L++ LCK+  +  A+++  S
Sbjct: 371 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 430

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G+ P+   Y  L+ GY K   +E A+++ + M +   KP+L++Y SII G C    
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L+  K +L+  +  G+  + +   T+I+ YF  GK ++A   F EM++VG+    V Y +
Sbjct: 491 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 550

Query: 574 LINFLCKFG-----------------------------------CYQQARELMKVMILHG 598
           LI+ LC+ G                                   C + A++L   M   G
Sbjct: 551 LIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRG 610

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + PD   +T L+    K+ + +E + L   M    +  D   Y +++S
Sbjct: 611 MTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVS 658



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 222/473 (46%), Gaps = 47/473 (9%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+    ++G+ E    +  ++K  G    I  +N  ++   K  ++ R ++ + EM
Sbjct: 267 TYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM 326

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G   NV T++ +I A CKE  ++ A+ L   M ++G+ PN   +  +I+  C+ G+L
Sbjct: 327 KNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNL 386

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KL   M + +G  V  N VT+  +++G CK GR+  AEE+  +M+K GI  N + Y
Sbjct: 387 TEAWKLLNDM-LQAG--VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY 443

Query: 328 ATLIDGYARGGSSEEALRLC-----------------------------------DEMVK 352
             L+ GY +    E+A+++                                    +EM  
Sbjct: 444 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 503

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG+  N V+  + I   F  G    AL    +M D  +     TY +L  GLC  G V+ 
Sbjct: 504 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVEL 563

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A     ++L   +  +   Y  LI+ LC +N + +AK+L   M  RG+ PDI  +  LID
Sbjct: 564 AVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALID 623

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G  K GN++ A+ +   M ++  + +L +Y S+++G  +   L  A+         G+L 
Sbjct: 624 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 683

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG--------IAVNKVGYNILIN 576
           + +    L+  Y+  G++ EA  + +EM  +         +A N+ G N+ ++
Sbjct: 684 EEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFDAQLAYNEQGVNLTLH 736



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 161/331 (48%), Gaps = 1/331 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L   +   G  EEA      M     +P     N  +H L   G+ +      +DMI
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I P  FTY+++   LC+ G ++ + +L  Q+ E  +  D  +YN LI+   K  +L 
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
               L + M   G +PDIITY  LI+ YCK   +  A + +  MK    KPN+V Y+++I
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +  CK+  +  A  LL   +R GLL +  TY +LI+     G + EA+ + ++M   G+ 
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 402

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           +N V Y  L++ LCK G   +A E+ + M+  GI P+   YT LV  + K    E+ +++
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 462

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              M    + PD   Y +II     ++  E+
Sbjct: 463 LKQMTECNIKPDLILYGSIIWGHCSQRKLEE 493


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 158/549 (28%), Positives = 269/549 (48%), Gaps = 52/549 (9%)

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           +C+++      +  I KL   G   ++  +N  L  L   + I     L+ +M       
Sbjct: 128 SCSKLPFALSTFGKITKL---GFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----P 180

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV TF  ++  LC+E ++ EA++L  RML+ G+ PN + +  I++  C++GD   AL L 
Sbjct: 181 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 240

Query: 275 RKM------------------GV---------------MSGDSVLPNSVTHNCIINGFCK 301
           RKM                  G+               M    + P+ VT+NC+INGFC 
Sbjct: 241 RKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCI 300

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   AE++   M++  I+ +V T++ LI+ + + G   EA  L DEM+ R ++P+ V 
Sbjct: 301 SGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVT 360

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y+S I     +  ++ A  +      K   PD  T++ L  G CR   V    KL +++ 
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +V +  +Y  LI+  C+  +L AA+ LL  MI  G+ P+++T  TL+DG C  G ++
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480

Query: 482 GAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
            A+++++ M+K +            +P++  YN +I GL  +     A+ L +     G+
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D ITY+++I+G     ++ EA  MF  M +   + + V +N LI   CK G      E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M   GI+ D +TY TL+  F K  + +  +++  +M+ SGV PD  T   +++ L 
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660

Query: 650 GEKSAEDQV 658
            ++  E  V
Sbjct: 661 SKEELERAV 669



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 247/515 (47%), Gaps = 55/515 (10%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +   +  +V++        L+K+M       N  +F +++   C   KL  ALS +
Sbjct: 80  SVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTF 139

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            ++ K G  P VV FN +++  C    +  AL LF +M         PN VT   ++NG 
Sbjct: 140 GKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM-------CKPNVVTFTTLMNGL 192

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPN 358
           C+ GRV  A  +   M++ G+  N  TY T++DG  + G +  AL L  +M +   ++PN
Sbjct: 193 CREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPN 252

Query: 359 NVVYNSTIHWLFAEGDVEGA--LFV---------------------------------LS 383
            V+YN+ I  L+ +G    A  LF+                                 L 
Sbjct: 253 VVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQ 312

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M+++ I PD  T+S L     + G   +A +L++++L   ++    +Y+ +I+  CK N
Sbjct: 313 EMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQN 372

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            L AA+ +      +G  PDIIT+ TLI GYC+   ++  +++   M +     N + Y 
Sbjct: 373 RLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 432

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G C+   L+AA+ LLQ     G+  + +T NTL++G   NGK+ +A  MF  M+  
Sbjct: 433 TLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492

Query: 563 -----------GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
                      G+  +   YNILI  L   G + +A EL + M   GI+PD +TY++++ 
Sbjct: 493 KMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              K    +E  ++ D M     SPD  T+N +I+
Sbjct: 553 GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLIT 587



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 224/465 (48%), Gaps = 49/465 (10%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-------------- 277
           L++A+ L+  M++S   P+V+ F  ++    ++G  +  + L +KM              
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 278 ------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
                             G ++     P  VT N +++G C   R+  A ++ + M K  
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKP- 180

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              NV T+ TL++G  R G   EA+ L D M++ GL PN + Y + +  +   GD   AL
Sbjct: 181 ---NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 380 FVLSDMID-KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
            +L  M +  HI P+   Y+ +  GL ++G    A  L  ++ E+ +  D  +YN +IN 
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C S   + A+QLL  M+ R + PD++T+  LI+ + K G    A ++Y+ M      P+
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
            V Y+S+I+G CK   LDAA+ +   +   G   D IT+NTLI GY    ++ +   +  
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   G+  N + Y  LI+  C+ G    A++L++ MI  G+ P+ VT  TL+     N 
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 618 SPEEVIELHDDMVLS-----------GVSPDNQTYNAIISPLLGE 651
             ++ +E+   M  S           GV PD QTYN +I  L+ E
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINE 522



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 188/378 (49%), Gaps = 14/378 (3%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A  ++Q++  +  +  +  ++  ++  VK  +     +LY EM+    + +  T+
Sbjct: 302 GRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           + +I   CK+ +L+ A  ++Y     G  P+++ FN +I   C+   ++  +KL  +M  
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM-- 419

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            +   ++ N++T+  +I+GFC++G +  A+++   MI +G+  NV T  TL+DG    G 
Sbjct: 420 -TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478

Query: 340 SEEALRLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            ++AL +   M K            G+ P+   YN  I  L  EG    A  +  +M  +
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I PD  TYS +  GLC+   + +A ++ + +  +    D  ++N LI   CK+  +   
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L   M  RG++ D ITY TLI G+ K  NI+GA+ +++ M      P+ +   +++ G
Sbjct: 599 LELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTG 658

Query: 509 LCKDASLDAAKSLLQASQ 526
           L     L+ A ++L+  Q
Sbjct: 659 LWSKEELERAVAMLEDLQ 676



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 185/385 (48%), Gaps = 9/385 (2%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  L+ A+ LF   G M     LP+ +    ++    ++GR +    +   M    + C
Sbjct: 58  EIKGLDDAIDLF---GYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  ++  L+  +        AL    ++ K G  P  V +N+ +H L  E  +  AL   
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL--- 171

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            D+  +   P+  T++ L  GLCR G V +A  L +++LE+ +  +  +Y  +++ +CK 
Sbjct: 172 -DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230

Query: 443 NNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +A  LL  M  V  +IP+++ Y T+IDG  K G    A  ++  M++ E  P++V 
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +ING C       A+ LLQ   +R    D +T++ LIN +   GK  EA  ++ EM 
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
              I  + V Y+ +I+  CK      A  +  +    G  PD +T+ TL+  + +    +
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + I+L  +M  +G+  +  TY  +I
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLI 435



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 178/362 (49%), Gaps = 16/362 (4%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K  P V  F AL+ A  + G    A ++  ++  +    S   +++ +    K N +   
Sbjct: 318 KINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA 377

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             ++    + G   ++ TFN +I   C+  ++++ + L + M ++G+  N + +  +I+ 
Sbjct: 378 EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 437

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-- 318
            CQVGDL  A  L ++M + SG  V PN VT N +++G C  G+++ A E+  AM K+  
Sbjct: 438 FCQVGDLNAAQDLLQEM-ISSG--VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 319 ---------GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                    G++ +V+TY  LI G    G   EA  L +EM  RG++P+ + Y+S I  L
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +  ++ A  +   M  K   PD  T++ L  G C+ G V    +L  ++ +  +V DA
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +Y  LI    K +N+  A  +   MI  G+ PD IT   ++ G      +E AV + E+
Sbjct: 615 ITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLED 674

Query: 490 MK 491
           ++
Sbjct: 675 LQ 676



 Score = 40.0 bits (92), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/118 (20%), Positives = 52/118 (44%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  +   +  K  S  +  +N  ++   K   +    +L+ EM   G V +  T+  +IY
Sbjct: 563 ATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIY 622

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
              K   ++ AL ++  M+ SG++P+ +    ++       +LE A+ +   + +  G
Sbjct: 623 GFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMSVG 680


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 183/654 (27%), Positives = 303/654 (46%), Gaps = 83/654 (12%)

Query: 43  LRQRKW---KILEQMAPSLTNSLVNRVVSEFR-----KSPKLALEFYTWVGENNRFSHSL 94
           L  R+W   +  +++APS+T +    V   FR       P  AL F+ W+   + F H+ 
Sbjct: 34  LSTRRWNKGRAYKRLAPSVTAA---HVADLFRADSTAPEPATALAFFEWLARRDGFRHTA 90

Query: 95  ESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
           +S  A++HLL   R                  +P ++ E L+ S   C  T    D  V 
Sbjct: 91  DSHAALLHLLSRRR------------------APAQY-ERLVVSMLNCSDTAE--DMRVS 129

Query: 155 ACTQIGATEGAYDVIQKLKVKGH---SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           A           D IQ ++  G    ++S   +N  L  L + +      ++Y ++V  G
Sbjct: 130 A-----------DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDG 178

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            + +  T+N +I + CKE  L  A   +  +L+ G+ P     N ++   C+ G+L  A 
Sbjct: 179 LLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKAC 238

Query: 272 KLFRKMGV--------------------------------MSGDSVLPNSVTHNCIINGF 299
            LF  M +                                M  D   PN      +I+G 
Sbjct: 239 WLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGL 298

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK GRV  A  +  AM + G+  +V TY  +I GY++ G   +AL++ + M K G  P++
Sbjct: 299 CKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 358

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YN+ I+ L  +   E A  +L++ + +   P   T++ L  G C       A ++ N+
Sbjct: 359 WTYNTLIYGL-CDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNK 417

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++      D   +  LIN L K + L  AK+LL+ +   GL+P++ITY ++IDGYCK G 
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A++V + M++   +PN   YNS++ GL KD  L  A +LL   Q+ G++ + ITY T
Sbjct: 478 VDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT 537

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L+ G         AF +F  M   G+  ++  Y +L + LCK G   +A E    ++  G
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKG 594

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    V YTTL+  FSK  + +    L + M+  G +PD+ TY+ ++  L  +K
Sbjct: 595 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK 648



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/621 (25%), Positives = 249/621 (40%), Gaps = 119/621 (19%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L++          A  +   +K  G S ++ A+   +S L K   +G   
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 202 KLYKEMVSCGYVENVN-----------------------------------TFNLVIYAL 226
            L+  M   G V +V                                    T+N +IY L
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
           C + K EEA  L    +K G  P VV F  +IN  C     + AL++  KM         
Sbjct: 369 CDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
                                    +S + ++PN +T+  II+G+CK G+V+ A E+   
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G   N  TY +L+ G  +     +A+ L  +M K G++PN + Y + +     E D
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK------------------- 415
            + A  +   M    + PD   Y++LT  LC+ G  ++A+                    
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 607

Query: 416 -------------LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
                        L  ++++E    D+Y+Y++L++ LCK   L  A  +L  M +RG+  
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            I  Y  LID   + G  + A ++Y  M     KP+   Y   IN  CK+  L+ A+ L+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              +R G+  D +TYN LI+G    G I  AF+    M       N   Y +L+  L K 
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK- 786

Query: 582 GCYQQAR-----------------ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           G     R                 +L++ M+ HG+ P   TY++L+  F K    EE   
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           L D M   G+SP+   Y  +I
Sbjct: 847 LLDHMCGKGLSPNEDIYTLLI 867



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 40/558 (7%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           +FDDAL +   +MS+                  CK    VF  L+ +  +    + A ++
Sbjct: 407 KFDDALRMKNKMMSSK-----------------CKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + ++   G   ++  + + +    K  ++    ++ K M   G   N  T+N ++Y L K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + KL +A++L  +M K GI PNV+ +  ++   C   D + A +LF    +M  + + P+
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE---MMEQNGLKPD 566

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              +  + +  CK GR   AEE    +++ G+      Y TLIDG+++ G+++ A  L +
Sbjct: 567 EHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M+  G  P++  Y+  +H L  +  +  AL +L  M  + I    F Y+IL   + R G
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A +++N++        A +Y + IN  CK   L  A+ L+  M   G+ PD++TY 
Sbjct: 684 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 743

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK---------DAS----- 514
            LIDG    G I+ A    + M     +PN   Y  ++  L K         D S     
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 515 --LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    LL+   + GL   + TY++LI G+   G++ EA  +   M   G++ N+  Y
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
            +LI   C    +++A   + +M   G  P   +Y  LV         E+V  L  D++ 
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923

Query: 632 SGVSPDNQTYNAIISPLL 649
            G + D   +  +   LL
Sbjct: 924 LGYNHDEVAWKILNDGLL 941



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 254/542 (46%), Gaps = 19/542 (3%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVK 175
           G+L +A+    L  LEG L+        P  F  +ALV    + G    A  +   + + 
Sbjct: 197 GDLTTAHRYFRL-LLEGGLE--------PETFTCNALVLGYCRTGELRKACWLFLMMPLM 247

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   + +++   +  L     + +   L+  M   G   NV  F  +I  LCK  ++ +A
Sbjct: 248 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L+  M ++G+ P+V+ +N +I    ++G +  ALK+     +M  +   P+  T+N +
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKE---LMEKNGCHPDDWTYNTL 364

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I G C   + E AEE+    +K G    V T+  LI+GY      ++ALR+ ++M+    
Sbjct: 365 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             +  V+   I+ L  +  ++ A  +L+++    + P+  TY+ +  G C++G V  A +
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   +  +    +A++YN L+  L K   L  A  LL+ M   G+IP++ITY TL+ G C
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
              + + A +++E M++   KP+   Y  + + LCK    + A S +    R G+ L  +
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKV 600

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y TLI+G+   G    A  +   M + G   +   Y++L++ LCK     +A  ++  M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
            L GI      YT L+    +    +    ++++M  SG  P   TY   I+    E   
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 655 ED 656
           ED
Sbjct: 721 ED 722



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 197/456 (43%), Gaps = 54/456 (11%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           FD+A  L   +M  N + P E             A   + DAL +A    G  E AY  I
Sbjct: 548 FDNAFRLF-EMMEQNGLKPDE------------HAYAVLTDALCKA----GRAEEAYSFI 590

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            +   KG +++   +   +    K         L + M+  G   +  T++++++ALCK+
Sbjct: 591 VR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +L EAL +  +M   GI   +  + ++I+E  + G  + A +++ +M   SG    P++
Sbjct: 648 KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM-TSSGHK--PSA 704

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+   IN +CK GR+E AE++   M + G+  +V TY  LIDG    G  + A      
Sbjct: 705 TTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764

Query: 350 MVKRGLMPN--------------NVVYNSTIH----WLFAEGDVEGALFVLSDMIDKHIC 391
           MV     PN              N+ Y  ++     W   E D+   L  L  M+   + 
Sbjct: 765 MVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQL--LERMVKHGLN 822

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS-----YNILINYLCKSNNLA 446
           P   TYS L  G C+ G +++A      +L +HM G   S     Y +LI   C +    
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEAC-----LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A   +S M   G  P + +Y  L+ G C  G+ E    ++ ++ ++    + V +  + 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 507 NGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLIN 541
           +GL K   +D    +L    +R   + + TY  + N
Sbjct: 938 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 177/666 (26%), Positives = 317/666 (47%), Gaps = 50/666 (7%)

Query: 27  ANPSTEDIVFRAICVNLR-----QRKW-KILEQMAPSLTNSLVNRVVSEFR-KSPKLALE 79
           A+ S  +   R I + LR     +  W    + +A  L    V++++   R  +   AL 
Sbjct: 41  ADASIPNDAVRQILIGLRSFGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSDSALF 100

Query: 80  FYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDS 138
            +  +     F HS  S   + H++    +  +   ++  ++    S S     E L +S
Sbjct: 101 LFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           +        V+D L  A ++      A  V+ K+KV    VSI  +N+ L     L    
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTD 217

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL---------------------- 236
             W +Y E+ + G  +N  T  ++I  LC++ +L++A+                      
Sbjct: 218 IMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALM 277

Query: 237 -------------SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
                        S +  M+K G+ P+V  +N++++  C  G +E AL+       M   
Sbjct: 278 SGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND---MENH 334

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V P+ VT+N + NGF  LG +  A ++   M+  G++ ++ TY  LI G+ + G+ EE+
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            +L ++M+ +GL  + V Y   +  L   G ++ A+ +L +M    + PD  TYS+L  G
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHG 454

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+ G V++A +L+ ++  + +  +++  + +I+ L +   ++ A+    S+    +  +
Sbjct: 455 LCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEE 514

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           II Y  +IDGY K GNI  AV+ Y+ + +    P +V +NS+I G CK   L  A  LL 
Sbjct: 515 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLD 574

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             +  GL+  ++TY TL+NGY   G +   F M  EM    I   ++ Y +++  LCK G
Sbjct: 575 TIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 634

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              ++ +L+K M   G+ PD +TY T++  F K    ++  +LH+ M+   + P   TYN
Sbjct: 635 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 694

Query: 643 AIISPL 648
            +I+ L
Sbjct: 695 VLINGL 700



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 249/479 (51%), Gaps = 4/479 (0%)

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +G   GA+ V+Q++ + G +  +  +   +    ++  I   +KL ++M+S G   ++ T
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           + +++ +LCK  +++EA+ L + M   G+ P+++ ++++I+  C+ G +E A++L+ +M 
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM- 471

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 + PNS   + II+G  + G +  A+    ++ K+ +   +  Y  +IDGYA+ G
Sbjct: 472 --CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +  EA+R   +++++G+ P  V +NS I+    +G +  A+ +L  +    + P   TY+
Sbjct: 530 NIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYT 589

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +   F + +++  + +     +Y +++  LCK   L  + QLL  M  R
Sbjct: 590 TLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR 649

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL PD ITY T+I  +CK  +++ A Q++  M +   +P+ V YN +INGLC   +L  A
Sbjct: 650 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 709

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL   Q   + L  + Y T+I  +   G +  A   F +M   G  V+   Y+ +IN 
Sbjct: 710 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 769

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           LCK      A+    +M+ HGI PD      ++  F ++  P  V E+   M+  G+ P
Sbjct: 770 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 256/539 (47%), Gaps = 43/539 (7%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P + D L R        + A   +++   +    S+ ++N  +S   K+  +      + 
Sbjct: 239 PILIDGLCRQ----SRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFC 294

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            M+  G + +V ++N++++ LC    +EEAL     M   G+ P++V +N++ N    +G
Sbjct: 295 MMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILG 354

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +  A K+ ++M +++G  + P+ VT+  +I G C++G +E + +++  M+  G+  ++ 
Sbjct: 355 LISGAWKVVQRM-LLNG--LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIV 411

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  L+    + G  +EA+ L  EM   GL P+ + Y+  IH L   G VE A+ +  +M
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEM 471

Query: 386 IDKHICPDHFT-----------------------------------YSILTKGLCRNGCV 410
             K I P+ F                                    Y+I+  G  + G +
Sbjct: 472 CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNI 531

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A + + Q++E+ +     ++N LI   CK   LA A +LL ++ V GL+P  +TY TL
Sbjct: 532 GEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTL 591

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GYC+ G++     +   M+    KP  + Y  ++ GLCK+  L  +  LL+     GL
Sbjct: 592 MNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGL 651

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D ITYNT+I  +     + +AF + ++M    +  + V YN+LIN LC +G  + A  
Sbjct: 652 FPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADR 711

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L+  +    I    V YTT++         +  +     MV  G     + Y+A+I+ L
Sbjct: 712 LLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRL 770



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 236/524 (45%), Gaps = 57/524 (10%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           ALEF      N+  +H +E      ++L N  R      ++G +  A  V     L GL 
Sbjct: 324 ALEF-----TNDMENHGVEPDIVTYNILANGFR------ILGLISGAWKVVQRMLLNGL- 371

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
                       +  L+    Q+G  E ++ + +K+  +G  +SI  +   LS L K   
Sbjct: 372 ------NPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR 425

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           I     L  EM   G   ++ T++++I+ LCK   +EEA+ LY  M    I+PN    + 
Sbjct: 426 IDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSA 485

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           II+   + G +  A   F  +   +   V    + +N +I+G+ KLG +  A      +I
Sbjct: 486 IISGLFEKGAISEAQMYFDSV---TKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 542

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           + GI   + T+ +LI G+ + G   EA++L D +   GL+P +V Y + ++    EGD+ 
Sbjct: 543 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 602

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNG---------------------------- 408
               +L +M  K I P   TY+++ KGLC+ G                            
Sbjct: 603 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 662

Query: 409 ---C----VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
              C    +++AF+LHNQ+L+  +     +YN+LIN LC   NL  A +LL ++  + + 
Sbjct: 663 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 722

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
              + Y T+I  +C  G+++ A+  +  M +   + ++  Y+++IN LCK   +  AK  
Sbjct: 723 LTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFF 782

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
                  G+  D      ++N +  +G     F +F+ M   G+
Sbjct: 783 FCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGL 826


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 183/654 (27%), Positives = 303/654 (46%), Gaps = 83/654 (12%)

Query: 43  LRQRKW---KILEQMAPSLTNSLVNRVVSEFR-----KSPKLALEFYTWVGENNRFSHSL 94
           L  R+W   +  +++APS+T +    V   FR       P  AL F+ W+   + F H+ 
Sbjct: 34  LSTRRWNKGRAYKRLAPSVTAA---HVADLFRAESTAPEPATALAFFEWLARRDGFRHTA 90

Query: 95  ESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
           +S  A++HLL   R                  +P ++ E L+ S   C  T    D  V 
Sbjct: 91  DSHAALLHLLSRRR------------------APAQY-ERLVVSMLNCSDTAE--DMRVS 129

Query: 155 ACTQIGATEGAYDVIQKLKVKGH---SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           A           D IQ ++  G    ++S   +N  L  L + +      ++Y ++V  G
Sbjct: 130 A-----------DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDG 178

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            + +  T+N +I + CKE  L  A   +  +L+ G+ P     N ++   C+ G+L  A 
Sbjct: 179 LLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKAC 238

Query: 272 KLFRKMGV--------------------------------MSGDSVLPNSVTHNCIINGF 299
            LF  M +                                M  D   PN      +I+G 
Sbjct: 239 WLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGL 298

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK GRV  A  +  AM + G+  +V TY  +I GY++ G   +AL++ + M K G  P++
Sbjct: 299 CKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDD 358

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YN+ I+ L  +   E A  +L++ + +   P   T++ L  G C       A ++ N+
Sbjct: 359 WTYNTLIYGL-CDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNK 417

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++      D   +  LIN L K + L  AK+LL+ +   GL+P++ITY ++IDGYCK G 
Sbjct: 418 MMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGK 477

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A++V + M++   +PN   YNS++ GL KD  L  A +LL   Q+ G++ + ITY T
Sbjct: 478 VDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT 537

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L+ G         AF +F  M   G+  ++  Y +L + LCK G   +A E    ++  G
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKG 594

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    V YTTL+  FSK  + +    L + M+  G +PD+ TY+ ++  L  +K
Sbjct: 595 VALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK 648



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/621 (25%), Positives = 250/621 (40%), Gaps = 119/621 (19%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L++   +      A  +   +K  G S ++ A+   +S L K   +G   
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 202 KLYKEMVSCGYVENVN-----------------------------------TFNLVIYAL 226
            L+  M   G V +V                                    T+N +IY L
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
           C + K EEA  L    +K G  P VV F  +IN  C     + AL++  KM         
Sbjct: 369 CDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
                                    +S + ++PN +T+  II+G+CK G+V+ A E+   
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G   N  TY +L+ G  +     +A+ L  +M K G++PN + Y + +     E D
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK------------------- 415
            + A  +   M    + PD   Y++LT  LC+ G  ++A+                    
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 607

Query: 416 -------------LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
                        L  ++++E    D+Y+Y++L++ LCK   L  A  +L  M +RG+  
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            I  Y  LID   + G  + A ++Y  M     KP+   Y   IN  CK+  L+ A+ L+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              +R G+  D +TYN LI+G    G I  AF+    M       N   Y +L+  L K 
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK- 786

Query: 582 GCYQQAR-----------------ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           G     R                 +L++ M+ HG+ P   TY++L+  F K    EE   
Sbjct: 787 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 846

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           L D M   G+SP+   Y  +I
Sbjct: 847 LLDHMCGKGLSPNEDIYTLLI 867



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 40/558 (7%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           +FDDAL +   +MS+                  CK    VF  L+ +  +    + A ++
Sbjct: 407 KFDDALRMKNKMMSSK-----------------CKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + ++   G   ++  + + +    K  ++    ++ K M   G   N  T+N ++Y L K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + KL +A++L  +M K GI PNV+ +  ++   C   D + A +LF    +M  + + P+
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE---MMEQNGLKPD 566

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              +  + +  CK GR   AEE    +++ G+      Y TLIDG+++ G+++ A  L +
Sbjct: 567 EHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M+  G  P++  Y+  +H L  +  +  AL +L  M  + I    F Y+IL   + R G
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A +++N++        A +Y + IN  CK   L  A+ L+  M   G+ PD++TY 
Sbjct: 684 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 743

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK---------DAS----- 514
            LIDG    G I+ A    + M     +PN   Y  ++  L K         D S     
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 515 --LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    LL+   + GL   + TY++LI G+   G++ EA  +   M   G++ N+  Y
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
            +LI   C    +++A   + +M   G  P   +Y  LV         E+V  L  D++ 
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923

Query: 632 SGVSPDNQTYNAIISPLL 649
            G + D   +  +   LL
Sbjct: 924 LGYNHDEVAWKILNDGLL 941



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 254/542 (46%), Gaps = 19/542 (3%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVK 175
           G+L +A+    L  LEG L+        P  F  +ALV    + G    A  +   + + 
Sbjct: 197 GDLTTAHRCFRL-LLEGGLE--------PETFTCNALVLGYCRTGELRKACWLFLMMPLM 247

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   + +++   +  L +   +     L+  M   G   NV  F  +I  LCK  ++ +A
Sbjct: 248 GCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L+  M ++G+ P+V+ +N +I    ++G +  ALK+     +M  +   P+  T+N +
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKE---LMEKNGCHPDDWTYNTL 364

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I G C   + E AEE+    +K G    V T+  LI+GY      ++ALR+ ++M+    
Sbjct: 365 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 423

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             +  V+   I+ L  +  ++ A  +L+++    + P+  TY+ +  G C++G V  A +
Sbjct: 424 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 483

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   +  +    +A++YN L+  L K   L  A  LL+ M   G+IP++ITY TL+ G C
Sbjct: 484 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
              + + A +++E M++   KP+   Y  + + LCK    + A S +    R G+ L  +
Sbjct: 544 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKV 600

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y TLI+G+   G    A  +   M + G   +   Y++L++ LCK     +A  ++  M
Sbjct: 601 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
            L GI      YT L+    +    +    ++++M  SG  P   TY   I+    E   
Sbjct: 661 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 720

Query: 655 ED 656
           ED
Sbjct: 721 ED 722



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 197/456 (43%), Gaps = 54/456 (11%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           FD+A  L   +M  N + P E             A   + DAL +A    G  E AY  I
Sbjct: 548 FDNAFRLF-EMMEQNGLKPDE------------HAYAVLTDALCKA----GRAEEAYSFI 590

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            +   KG +++   +   +    K         L + M+  G   +  T++++++ALCK+
Sbjct: 591 VR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +L EAL +  +M   GI   +  + ++I+E  + G  + A +++ +M   SG    P++
Sbjct: 648 KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM-TSSGHK--PSA 704

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+   IN +CK GR+E AE++   M + G+  +V TY  LIDG    G  + A      
Sbjct: 705 TTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 764

Query: 350 MVKRGLMPN--------------NVVYNSTIH----WLFAEGDVEGALFVLSDMIDKHIC 391
           MV     PN              N+ Y  ++     W   E D+   L  L  M+   + 
Sbjct: 765 MVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQL--LERMVKHGLN 822

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS-----YNILINYLCKSNNLA 446
           P   TYS L  G C+ G +++A      +L +HM G   S     Y +LI   C +    
Sbjct: 823 PTVTTYSSLIAGFCKAGRLEEAC-----LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A   +S M   G  P + +Y  L+ G C  G+ E    ++ ++ ++    + V +  + 
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 937

Query: 507 NGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLIN 541
           +GL K   +D    +L    +R   + + TY  + N
Sbjct: 938 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 973


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 153/474 (32%), Positives = 246/474 (51%), Gaps = 10/474 (2%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYD 167
           F    L++G+  + N    L+   G+ D    E C      +  L+      G  + A D
Sbjct: 234 FTYTSLILGHCRNRN----LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 289

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +++++  KG   +++ +   ++ L  +       +L   M   G   NV T+  +I  L 
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           +  KLE A+ LY++MLK G+ PN V +N +INE C  G    ALK+F     M G   L 
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH---WMEGHGSLA 406

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N+ T+N II G C  G +E A  +   M+K G    V TY TLI+GY   G+   A RL 
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D M + G  P+   YN  +      G +E A F   +M++  + P+  +Y+ L  G  ++
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V  A  L  ++ E     +  SYN +IN L K N  + A+++   M+ +GL+P++ITY
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG C+ G  + A +++ +M+K +  PNL  Y+S+I GLC++   D A+ LL+  +R
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 646

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            GL  D +T+ +LI+G+ + G+I  AF +   M ++G   N   Y++L+  L K
Sbjct: 647 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 173/644 (26%), Positives = 307/644 (47%), Gaps = 45/644 (6%)

Query: 21  HVGKQFANPSTEDIVFRAI----CVNLRQRKWK---ILEQMAPSLTNSLVNRVVSEFRKS 73
           H+   FA P++ +  F+AI    C  L + +WK    L+Q++P L    V  +V+   K 
Sbjct: 30  HISSHFAVPASRE-PFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVA-VHKD 87

Query: 74  PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE 133
            +  ++F+ W+ +   + H++    ++++ LV  R F                +P + + 
Sbjct: 88  TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVF----------------APADHIR 131

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            L+                ++AC          D + ++   G   S+++ N  L  L K
Sbjct: 132 ILM----------------IKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAK 175

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
              +     LYK+M++ G   ++ TFN +I  L K+ K+ EA  +  ++ +  + P+V  
Sbjct: 176 FEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFT 235

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +I   C+  +L+ A  +F +M     D   PNSVT++ +ING C  GRV+ A ++  
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCD---PNSVTYSTLINGLCNEGRVDEALDMLE 292

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            MI+ GI+  V TY   I         EEA+ L   M KRG  PN   Y + I  L   G
Sbjct: 293 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +E A+ +   M+ + + P+  TY+ L   LC  G    A K+ + +     + +  +YN
Sbjct: 353 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 412

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +I  LC   ++  A  L   M+  G +P ++TY TLI+GY   GN+  A ++ + MK+ 
Sbjct: 413 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
             +P+   YN +++G  K   L++A    Q     GL  + ++Y  LI+G+  +GK+  A
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            ++   M  +G   N   YN +IN L K   + +A ++   M+  G++P+ +TYTTL+  
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG 592

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +N   +   ++  DM      P+  TY+++I  L  E  A++
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 192/374 (51%), Gaps = 3/374 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     + AL+   +++G  E A  +  K+  +G   +   +N  ++ L          
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++  M   G + N  T+N +I  LC    +E+A+ L+ +MLK G  P VV +N +IN  
Sbjct: 394 KIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGY 453

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G++  A +L   + +M  +   P+  T+N +++GF K G++E A      M++ G++
Sbjct: 454 LTKGNVNNAARL---LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  +Y  LIDG+++ G  + AL L   M + G  PN   YN+ I+ L  E     A  +
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+++ + P+  TY+ L  GLCRNG  + AFK+ + + +   + + Y+Y+ LI  LC+
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A+ LL  M  +GL PD +T+ +LIDG+   G I+ A  +   M  +  KPN   
Sbjct: 631 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRT 690

Query: 502 YNSIINGLCKDASL 515
           Y+ ++ GL K+  L
Sbjct: 691 YSVLLKGLQKECLL 704


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 173/637 (27%), Positives = 311/637 (48%), Gaps = 7/637 (1%)

Query: 16  LSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPK 75
           L +++H   +  +  T   +   I   L   ++  L+ +    ++ +++ V+ + + +P 
Sbjct: 16  LRKSYHWKPRHESKLTRPELIDRISRLLVLGRYHALKDLNFQFSDYILDSVLLKLKFNPI 75

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM--SANSVSPLEFLE 133
            +L F+    + + F  ++ S C +VH+L   R +D+    +  L+  S N+ S L    
Sbjct: 76  ASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWN 135

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            L+  +E  K +P VFD +++   + G  + A  V   +   G   S+ + N  LS LV+
Sbjct: 136 ELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVR 195

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
             E      +Y  +   G V +V T ++++ A CK+  +  A+     M   G   NVV 
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +N +I+    +GD+E A  + + MG      +L N VT   +I G+C+  ++E AE++  
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMG---ERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312

Query: 314 AMIKA-GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
            M ++ G+  +   Y  LIDGY R    ++A+RL DEM+  GL  N  + N+ I+     
Sbjct: 313 EMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKN 372

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G V  A  +L  M+D  + P+ ++YS L  G CR G V +A  ++N++L   +  +  ++
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTH 432

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N L+  LC+      A  +   M+ RG+ PD ++Y TL+D   K G    A+ ++ ++  
Sbjct: 433 NSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILA 492

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
                +   +N++ING CK   +  A+      + +G   D +TY TLI+GY   G + E
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           AF +  +M    I  +   YN LI  L K    ++  +L+  M L G+ P+ VTY TL+ 
Sbjct: 553 AFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIA 612

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +      ++    + DM+  G +P+    + I+S L
Sbjct: 613 GWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSL 649



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 164/578 (28%), Positives = 267/578 (46%), Gaps = 77/578 (13%)

Query: 145 TPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
            P VF    +V A  + G    A D ++++   G  +++  +N+ +   V + ++ R   
Sbjct: 215 VPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEM 274

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFNMIINEA 261
           + K M   G + N  T  L+I   C++CKLEEA  +   M +S G+  +   + ++I+  
Sbjct: 275 VLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGY 334

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+V  ++ A++L  +M  +    +  N    N +ING+CK G+V  AE +   M+   ++
Sbjct: 335 CRVCKMDDAVRLRDEMLNVG---LRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLE 391

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
               +Y+TL+DG+ R G   +A+ + +EM++ G+  N V +NS +  L   G  E AL V
Sbjct: 392 PESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHV 451

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+ + + PD  +Y  L   L + G   +A  L N +L        Y++N +IN  CK
Sbjct: 452 WHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCK 511

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A++  + M   G  PD +TY TLIDGYCK GN+E A +V E M+K    P++ +
Sbjct: 512 MEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIEL 571

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI-------------------- 540
           YNS+I GL K         LL      GL  + +TY TLI                    
Sbjct: 572 YNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMI 631

Query: 541 -NGYFIN--------------GKIAEAFAMFSEMRNVGIAV------------------- 566
             G+  N              G+I EA  +  +M N+ + +                   
Sbjct: 632 EKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQ 691

Query: 567 ----------------NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
                           N V YNI I  LCK G    A+++   ++L G  PD  TY TL+
Sbjct: 692 KIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLI 751

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +S   +  +   L D+M+  G++P+  TYNA+I+ L
Sbjct: 752 HGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGL 789



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 243/469 (51%), Gaps = 12/469 (2%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           ++++  +    +   + +   +Y EM+  G   NV T N ++  LC+    E+AL +++ 
Sbjct: 395 YSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHL 454

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS-GDSVLPNSVTHNCIINGFC 300
           MLK G+ P+ V +  +++   ++G+   AL L+  +     G S    +   N +INGFC
Sbjct: 455 MLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRS----TYAFNTMINGFC 510

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K+ ++  AEE    M + G + +  TY TLIDGY + G+ EEA ++ ++M K  ++P+  
Sbjct: 511 KMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIE 570

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +YNS I  LF        + +LS+M  K + P+  TY  L  G C  G + +AF  +  +
Sbjct: 571 LYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDM 630

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           +E+    +    + +++ L +   +  A  LL  M+   +  D   +  L       GN+
Sbjct: 631 IEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKA--DDGNL 688

Query: 481 EGAVQVYENMKKVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           +   ++ + + +  K    PN V+YN  I GLCK   +D AK +  +    G   D  TY
Sbjct: 689 DSQ-KIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTY 747

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            TLI+GY   G + +AF++  EM   G+A N + YN LIN LCK G   +A++L   + L
Sbjct: 748 CTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHL 807

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            G+ P+ ++Y  L+  + KN +  E ++L + M+  G+SP   TY+A+I
Sbjct: 808 KGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALI 856



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 229/480 (47%), Gaps = 37/480 (7%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           ++L++   ++GA E A  V   +  +G +    ++   L  L K+ E  R   L+ ++++
Sbjct: 433 NSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILA 492

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            GY  +   FN +I   CK  K+ EA   + RM + G  P+ V +  +I+  C++G++E 
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEE 552

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A K+  KM     +++LP+   +N +I G  K  +     ++   M   G+  NV TY T
Sbjct: 553 AFKVKEKM---EKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGT 609

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI G+   G  ++A     +M+++G  PN ++ +  +  L+  G ++ A  +L  M++  
Sbjct: 610 LIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLD 669

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  DH  +  L K    N   ++     ++  +   + ++  YNI I  LCKS  +  AK
Sbjct: 670 VFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAK 729

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           ++ SS+++RG  PD  TY TLI GY   GN+  A  + + M K    PN+          
Sbjct: 730 KIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNI---------- 779

Query: 510 CKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
                                   ITYN LING   +G +  A  +F ++   G+A N +
Sbjct: 780 ------------------------ITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVI 815

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YNILI+  CK G  ++A +L   M+  GI P  +TY+ L+  F K     +   L D+M
Sbjct: 816 SYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM 875


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 252/473 (53%), Gaps = 10/473 (2%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+ ++N+ LS L K+    + + LY +M   G   +  T N+++  LC   +L E  + +
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +L+ G  PN+V +N +I   C    +  A +LF +M  +      P+ VT+  +I G 
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG---CTPDVVTYGTLIKGL 184

Query: 300 CKLGRVEFAEEIRYAMI----KAGIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           C  G +  A ++   M+    +  I+C  NV TY  ++DG  + G  +EA +L +EM  +
Sbjct: 185 CGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQ 244

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G++P+ + YNS IH     G  E +  +L +M+D+ + PD  T+++L   LC+ G V +A
Sbjct: 245 GMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 304

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            KL   ++E  +V D  +YN LI   C   +L +A++L  SM  +G  PD+I+Y  LI+G
Sbjct: 305 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 364

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD- 532
           Y K   +E A+++Y  M  V K+PN++ Y+S++ G+     +D AK L    +  G+ + 
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 424

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + TY   ++G   N  + EA  +F+E+++    +     N LI+ LCK G  + A EL +
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            +   G  P+ VTYT ++  F +    ++   L   M  +G +PD  TYN ++
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 537



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 160/519 (30%), Positives = 268/519 (51%), Gaps = 6/519 (1%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            TP++  F+ L+    +I      + +  ++++ G S      N  L+ L  +N +   +
Sbjct: 65  PTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGF 124

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             +  ++  GY  N+ T+N +I  LC E ++ EA  L+ RM K G  P+VV +  +I   
Sbjct: 125 AAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGL 184

Query: 262 CQVGDLEFALKLFRKM-GVMSGDSV--LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           C  G++  ALKL ++M   +S   +   PN +T+N I++G CK+GR + A+++   M   
Sbjct: 185 CGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQ 244

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  ++ +Y +LI G+   G  EE+ RL DEM+ +GL P+ V +N  I  L  EG V  A
Sbjct: 245 GMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 304

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L  MI+  I PD  TY+ L +G C  G +  A +L   +  +    D  SYN+LIN 
Sbjct: 305 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 364

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
             K+  +  A +L + M++ G  P++ITY +L+ G    G ++ A +++  MK      N
Sbjct: 365 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 424

Query: 499 LVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
              Y   ++GLCK D   +A K   +       L+    N LI+G    GK+  A+ +F 
Sbjct: 425 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 484

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           ++ N G   N V Y I+I+  C+ G   +A  L++ M  +G  PD +TY TL+  F ++ 
Sbjct: 485 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 544

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             EEV++L   M    VSPD  T + ++  L  ++  ++
Sbjct: 545 KLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQE 583



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 38/375 (10%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  +  L K+       +L++EM + G + ++ ++N +I+  C   K EE+  L   M
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           L  G+ P++V FN++I+  C+ G +  A KL   +GVM    ++P+ VT+N +I GFC +
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL---LGVMIESGIVPDLVTYNSLIEGFCMV 333

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +  A E+  +M   G + +V +Y  LI+GY++    EEA++L +EM+  G  PN + Y
Sbjct: 334 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 393

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV-- 420
           +S +  +F  G V+ A  + S M    I  + +TY I   GLC+N C+ +A KL  ++  
Sbjct: 394 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 453

Query: 421 ----------------------------LEEHMVGDAY-----SYNILINYLCKSNNLAA 447
                                       L E +  + +     +Y I+I+  C+   +  
Sbjct: 454 SNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDK 513

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L+  M   G  PDIITY TL+ G+ +   +E  VQ+   M + +  P+ +  + +++
Sbjct: 514 ANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVD 573

Query: 508 GLCKDASLDAAKSLL 522
            L KD        LL
Sbjct: 574 MLSKDEKYQECLHLL 588



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 45/421 (10%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           AL  ++ M++S   P++  FN +++   ++        L+ +M  +SG S   +  T N 
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMR-LSGLS--SDRCTLNI 109

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++N  C + R                         L +G+A              +++RG
Sbjct: 110 LLNCLCNVNR-------------------------LREGFAAFAG----------ILRRG 134

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             PN V YN+ I  L  E  +  A  +   M      PD  TY  L KGLC  G +  A 
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194

Query: 415 KLHNQVL------EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           KLH ++L      E +   +  +YNI+++ LCK      AKQL   M  +G+IP II+Y 
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYN 254

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +LI G+C  G  E + ++ + M     +P++V +N +I+ LCK+  +  AK LL      
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G++ D +TYN+LI G+ + G +  A  +F  M + G   + + YN+LIN   K    ++A
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 374

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            +L   M+L G  P+ +TY +L+         ++  +L   M   G++ ++ TY   +  
Sbjct: 375 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 434

Query: 648 L 648
           L
Sbjct: 435 L 435



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 17/171 (9%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           +A+ L   L S+N    +E L  L+D   +CKA               G  E A+++ +K
Sbjct: 443 EAMKLFTELKSSNFKLEIENLNCLIDG--LCKA---------------GKLETAWELFEK 485

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L  +GH  ++  +   +    +  ++ +   L ++M + G   ++ T+N ++    +  K
Sbjct: 486 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 545

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           LEE + L +RM +  + P+ +  +++++   +    +  L L  +  +  G
Sbjct: 546 LEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKG 596


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 264/510 (51%), Gaps = 4/510 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L+      G  + A ++  ++   GH   + ++N  ++ L           ++K+M
Sbjct: 165 TFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKM 224

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV T+N +I +LCK+  + +A+     M+  GI P+ + +N I++  C +G L
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQL 284

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +LF++   M  +   P+ VT+N II+   K   V  A +    M+  GI  +V TY
Sbjct: 285 NEATRLFKR---MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTY 341

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T++ G    G   EA+RL  +M ++G  P+ V YN+ I  L  +  V  A+  LS+M+D
Sbjct: 342 TTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVD 401

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I P+  TYS +  G C  G + +A +L  +++  +++ +  +++IL++ LC+   ++ 
Sbjct: 402 RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+ +  +M  +G+ P+I TY  L++GYC    +  A +V+E M      P+L  YN +IN
Sbjct: 462 ARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G C    +D AK+LL Q S +    + +TYNT++ G    G++ +A  +F +M + G+  
Sbjct: 522 GYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLP 581

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
             + Y+IL+N LCK G   +A +L K M    + PD + YT L+         E    L 
Sbjct: 582 TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLF 641

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +   G+ P  +TYN +I  LL E  +++
Sbjct: 642 SKLSADGIQPPGRTYNVMIKGLLKEGLSDE 671



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 270/532 (50%), Gaps = 8/532 (1%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATP----AVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           ++NS + +   + L   Y + +  P      F   + +  ++        +  ++ + G 
Sbjct: 65  ASNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGV 124

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           + ++++ N  ++ L +LN +     ++ +M   G   +V TF  +I  +C E K++ A+ 
Sbjct: 125 THTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVE 184

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           LY  M++SG  P+V+ +N +IN  C  G+   A+ +F+K   M  +   PN VT+N II+
Sbjct: 185 LYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKK---MEQNGCKPNVVTYNTIID 241

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             CK   V  A +    M+  GI  +  TY +++ G    G   EA RL   M + G  P
Sbjct: 242 SLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKP 301

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + V YN  I  L+ +  V  A   LS+M+D+ I PD  TY+ +  GLC  G + +A +L 
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLF 361

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++ ++    D  +YN +I+ LCK   +  A + LS M+ RG+ P+ +TY T++ G+C  
Sbjct: 362 KKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNL 421

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TY 536
           G ++ A Q+++ M      PN + ++ +++GLC++  +  A+ + +     G+   I TY
Sbjct: 422 GQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTY 481

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N L+NGY +  K+ EA  +F  M   G A +   YNILIN  C      +A+ L+  M +
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV 541

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + P+ VTY T++          +  EL   M  SG+ P   TY+ +++ L
Sbjct: 542 KKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 236/462 (51%), Gaps = 6/462 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     ++ ++ +  +      A D + ++  +G       +N+ +  L  L ++    
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+K M   G   +V T+N++I +L K+  + +A      M+  GI P+VV +  I++  
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C +G L  A++LF+KM         P+ V +N II+  CK   V  A E    M+  GI 
Sbjct: 349 CYLGQLNEAIRLFKKM---EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIP 405

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY+T++ G+   G  +EA +L  EMV R +MPN + ++  +  L  EG V  A +V
Sbjct: 406 PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWV 465

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M +K + P+ +TY+ L  G C    + +A K+   ++ +    D +SYNILIN  C 
Sbjct: 466 FETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCN 525

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S  +  AK LL+ M V+ L P+ +TY T++ G C  G +  A ++++ M      P L+ 
Sbjct: 526 SRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMT 585

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+ ++NGLCK   LD A  L ++ +   L  D I Y  LI G FI GK+  A  +FS++ 
Sbjct: 586 YSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS 645

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMK--VMILHGII 600
             GI      YN++I  L K G   +A EL +   M+ H +I
Sbjct: 646 ADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNVI 687



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 233/478 (48%), Gaps = 4/478 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ L+      G T  A  V +K++  G   ++  +N  +  L K   +        EMV
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +  T+N +++ LC   +L EA  L+ RM ++G  P+VV +N+II+   +   + 
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A     +M       + P+ VT+  I++G C LG++  A  +   M + G   +V  Y 
Sbjct: 321 DAADFLSEM---VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYN 377

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+ID   +     +A+    EMV RG+ PN V Y++ +H     G ++ A  +  +M+ +
Sbjct: 378 TIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           ++ P+  T+SIL  GLC+ G V +A  +   + E+ +  + Y+YN L+N  C    +  A
Sbjct: 438 NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEA 497

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           +++   M+ +G  PD+ +Y  LI+GYC    ++ A  +   M   +  PN V YN+I+ G
Sbjct: 498 RKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC    L  A+ L +     G+L  + TY+ L+NG   +G + EA  +F  M+   +  +
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPD 617

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + Y ILI  +   G  + A+ L   +   GI P   TY  ++    K    +E  EL
Sbjct: 618 IILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 199/426 (46%), Gaps = 49/426 (11%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++AL+ +YRM +    P++V F   +    ++      + L  +M +          VT
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFG--------VT 125

Query: 292 H-----NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           H     N +IN  C+L  V+FA  +   M K GI                          
Sbjct: 126 HTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQ------------------------- 160

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
                     P+ + + + I+ +  EG ++ A+ + ++M+     PD  +Y+ L  GLC 
Sbjct: 161 ----------PDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +G    A  +  ++ +     +  +YN +I+ LCK   +  A   LS M+ RG+ PD IT
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y +++ G C  G +  A ++++ M++   KP++V YN II+ L KD  ++ A   L    
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D +TY T+++G    G++ EA  +F +M   G   + V YN +I+ LCK     
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A E +  M+  GI P+ VTY+T++  F      +E  +L  +MV   V P+  T++ ++
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450

Query: 646 SPLLGE 651
             L  E
Sbjct: 451 DGLCQE 456



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 1/179 (0%)

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYN 537
           +++ A+  +  M ++  +P++V +   +  + K         L       G+   + + N
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LIN       +  A +++ +M  +GI  + + +  LIN +C  G  + A EL   M+  
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           G  PD ++Y TL+     + +    + +   M  +G  P+  TYN II  L  ++   D
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 72/156 (46%), Gaps = 2/156 (1%)

Query: 133 EGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           + LL    + K TP    ++ +++    +G    A ++ +K+   G   ++  ++  L+ 
Sbjct: 533 KALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNG 592

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K   +    KL+K M       ++  + ++I  +    KLE A  L+ ++   GI P 
Sbjct: 593 LCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPP 652

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
              +N++I    + G  + A +LFRK  +M  + ++
Sbjct: 653 GRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNVII 688


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 260/520 (50%), Gaps = 46/520 (8%)

Query: 172 LKVKGHSVS-IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           L ++ H +  I ++N  L  L K+N   + + LY EM   G   ++ T +++   LC   
Sbjct: 81  LMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVN 140

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++ EAL+    +L+ G  PNVV +  +I   C    +  A +LF +M  +      PN+V
Sbjct: 141 RVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG---CTPNAV 197

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMI----KAGIDCN--VRTYATLIDGYARGGSSEEAL 344
           T+  +I G C+ G V  A ++   M+    + G++C   V TY+ +IDG  + G  +EA 
Sbjct: 198 TYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAK 257

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L +EM  +G++P+ + Y++ IH     G  + +  +  +M+D+ + PD  T+S+L   L
Sbjct: 258 ELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTL 317

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G V +A KL   +++  +V +  +YN LI+  C   +L +A++L  SM  +GL PD 
Sbjct: 318 CKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDE 377

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           I+Y TLI+GYCK   ++ A+ +Y  M +V K PN+  Y +++ GL +   +  AK L   
Sbjct: 378 ISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGV 437

Query: 525 SQRIGL----------LDAI--------------------------TYNTLINGYFINGK 548
            +  G+          LD +                           Y+ LI+G    GK
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +  A+ +F ++   G+  + V YNI+I+  CK G    A  L + M  +G  PD + Y T
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L+  F +    EEVI+L   MV   VSP+  +   ++  L
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/554 (25%), Positives = 262/554 (47%), Gaps = 47/554 (8%)

Query: 115 LLMGNLMSAN--SVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQ 170
           L + N  + N  ++    F + ++ S+ I    P +  F+ L+    +I      + +  
Sbjct: 60  LFLRNCKTGNITAIQAFHFFDLMMRSHPI----PPISSFNRLLGGLAKINHYSQLFSLYN 115

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++++ G S  +   +   + L  +N +         ++  GY+ NV T+  +I  LC E 
Sbjct: 116 EMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEH 175

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVLP 287
           ++ EA  L+ RM K G  PN V +  +I   CQ G++  ALKL ++M       G +  P
Sbjct: 176 RISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKP 235

Query: 288 NSVTHNCIINGFCKLGRVEFAEE--------------IRYA------------------- 314
             +T++ II+G CK+GR + A+E              I Y+                   
Sbjct: 236 GVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLF 295

Query: 315 --MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M+  G+  ++ T++ LID   + G   EA +L + M++RG++PN + YNS I      
Sbjct: 296 DEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMV 355

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           GD+  A  +   M  K + PD  +Y+ L  G C+   VK+A  L+N++L+     +  +Y
Sbjct: 356 GDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             L+  L +   +  AK+L   M   G+  +   YG  +DG CK   +  A++++  +K 
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKS 475

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
              K N+  Y+ +I+GLCK   L+ A  L +   + GL  D +TYN +I+G+   G++  
Sbjct: 476 YNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDN 535

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +F +M   G   + + YN L+   C+    ++  +L+  M+   + P+  + T +V 
Sbjct: 536 ANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595

Query: 612 RFSKNCSPEEVIEL 625
              K+   ++ ++L
Sbjct: 596 MLCKDEKYKKFVDL 609



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 232/458 (50%), Gaps = 32/458 (6%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKAT 145
           F+ S+ ++C     L N  R  +AL  M  ++      N V+    ++GL   + I +AT
Sbjct: 127 FTLSILANC-----LCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEAT 181

Query: 146 --------------PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
                            +  L++   Q G    A  + +++        ++     +++ 
Sbjct: 182 RLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYS 241

Query: 192 VKLN---EIGR---FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           + ++   ++GR     +L++EM + G + +V +++ +I+  C   K +++  L+  M+  
Sbjct: 242 IIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G+ P++V F+++I+  C+ G +  A KL     VM    ++PN +T+N +I+GFC +G +
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLE---VMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A E+  +M   G++ +  +Y TLI+GY +    +EA+ L +EM++ G  PN   Y + 
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           +  LF +G V  A  +   M    +  +   Y I   GLC+N C+ +A +L N++   + 
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             +  +Y+ LI+ LCK+  L  A +L   +   GL PD++TY  +I G+CK G ++ A  
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++E M++    P+++ YN+++ G C+   L+    LL 
Sbjct: 539 LFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLH 576



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 9/313 (2%)

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL-SDMIDKHICPDHFTYSIL 400
           +A    D M++   +P    +N  +  L A+ +    LF L ++M    + PD FT SIL
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGL-AKINHYSQLFSLYNEMRLAGLSPDLFTLSIL 132

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              LC    V +A      +L    + +  +Y  LI  LC  + ++ A +L   M   G 
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKK------VEKKPNLVIYNSIINGLCKDAS 514
            P+ +TYGTLI G C+ GN+  A+++++ M        V  KP ++ Y+ II+GLCK   
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
            D AK L +  +  G++ D I+Y+TLI+G+   GK  ++  +F EM + G+  + V +++
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ LCK G   +A++L++VMI  GI+P+ +TY +L+  F          EL   M   G
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 634 VSPDNQTYNAIIS 646
           + PD  +Y  +I+
Sbjct: 373 LEPDEISYTTLIN 385



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 3/311 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L+    + G    A  +++ +  +G   ++  +N+ +     + ++    +L+  M
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   +  ++  +I   CK  K++EA++LY  ML+ G  PNV  +  ++    Q G +
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KLF   GVM    V  NS  +   ++G CK   +  A E+   +       N+  Y
Sbjct: 429 GDAKKLF---GVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENY 485

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LIDG  + G  E A  L +++ + GL P+ V YN  IH     G V+ A  +   M +
Sbjct: 486 SCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEE 545

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD   Y+ L  G C    +++  KL ++++++ +  +A S  I+++ LCK      
Sbjct: 546 NGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKK 605

Query: 448 AKQLLSSMIVR 458
              LL    V+
Sbjct: 606 FVDLLPKFPVQ 616


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/439 (33%), Positives = 230/439 (52%), Gaps = 4/439 (0%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G    + TFN ++  LC + K+ +A+ L+  M+K G  P+V+ ++ IIN  C++G+
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              AL+L +KM         PN V +N II+  CK   V  A +    M+K GI  +V T
Sbjct: 61  TTMALQLLKKM---EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y++++ G+   G   EA  L  +MV+R ++PN V +   I  L  +  +  A  V   M 
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K + PD +TY+ L  G C    + +A KL N +  +    +  SYNILIN  CKS  + 
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK LL+ M  + L PDI TY TL+ G+C+ G  + A ++ + M      PNL+ Y+ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK   LD A  LL+A Q   +   I  Y  LI G    GK+  A  +FS +   GI 
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
              V Y ++I+ L K G   +A EL + M ++G +P+  TY  ++  F +N      + L
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417

Query: 626 HDDMVLSGVSPDNQTYNAI 644
            ++MV  G S D+ T+  +
Sbjct: 418 IEEMVGKGFSADSSTFRML 436



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 216/409 (52%), Gaps = 4/409 (0%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M K G+ P +V FN +++  C    +  A+KLF +M  M  +   P+ +T++ IING CK
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHE---PDVITYSTIINGLCK 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G    A ++   M + G   NV  Y T+ID   +     EA+    EMVK G+ P+   
Sbjct: 58  MGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y+S +H     G V  A  +   M+++++ P+  T++IL  GLC+   + +A+ +   + 
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E+ +  D Y+YN L++  C  + +  A++L + M  +G  P++ +Y  LI+G+CK G I+
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A  +   M      P++  Y++++ G C+      A+ LL+     GLL + ITY+ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G   +G + EAF +   M+   I  N   Y ILI  +C FG  + AREL   + + GI 
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           P  VTYT +++   K     E  EL  +M ++G  P++ TYN II   L
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 12/466 (2%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   ++  +N  LS L    +I    KL+ EMV  G+  +V T++ +I  LCK      A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L L  +M + G  PNVV +N II+  C+   +  A+  F +M     + + P+  T++ I
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEM---VKEGIPPDVFTYSSI 121

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++GFC LGRV  A  +   M++  +  N  T+  LIDG  +     EA  + + M ++GL
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+   YN+ +    +   ++ A  + + M  K   P+  +Y+IL  G C++G + +A  
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L  ++  + +  D ++Y+ L+   C+      A++LL  M   GL+P++ITY  ++DG C
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-I 534
           K G+++ A ++ + M++ + +PN+ IY  +I G+C    L+AA+ L       G+    +
Sbjct: 302 KHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVV 361

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TY  +I+G    G   EA  +F EM   G   N   YN++I    + G    A  L++ M
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           +  G   D  T+  L    S   S +E+I       + G S D +T
Sbjct: 422 VGKGFSADSSTFRML----SDLESSDEII----SQFMRGSSQDRKT 459



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 219/433 (50%), Gaps = 4/433 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   F+ L+           A  +  ++   GH   +  ++  ++ L K+       +
Sbjct: 7   QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L K+M   G   NV  +N +I +LCK+  + EA+  +  M+K GI P+V  ++ I++  C
Sbjct: 67  LLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFC 126

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G +  A  LF++   M   +V+PN VT   +I+G CK   +  A  +   M + G++ 
Sbjct: 127 NLGRVNEATSLFKQ---MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY  L+DGY      +EA +L + M ++G  PN   YN  I+     G ++ A  +L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M  K + PD FTYS L +G C+ G  ++A +L  ++    ++ +  +Y+I+++ LCK 
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +L  A +LL +M    + P+I  Y  LI+G C  G +E A +++ N+     +P +V Y
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +I+GL K    + A  L +     G L ++ TYN +I G+  NG    A  +  EM  
Sbjct: 364 TVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVG 423

Query: 562 VGIAVNKVGYNIL 574
            G + +   + +L
Sbjct: 424 KGFSADSSTFRML 436



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 174/349 (49%), Gaps = 3/349 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     ++ ++ +  +      A D   ++  +G    +  +++ L     L  +    
Sbjct: 76  CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+K+MV    + N  TF ++I  LCK+  + EA  ++  M + G+ P+V  +N +++  
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    ++ A KLF    +M      PN  ++N +ING CK GR++ A+ +   M    + 
Sbjct: 196 CSRSQMDEAQKLFN---IMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLT 252

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY+TL+ G+ + G  +EA  L  EM   GL+PN + Y+  +  L   G ++ A  +
Sbjct: 253 PDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFEL 312

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M +  I P+ F Y+IL +G+C  G ++ A +L + +  + +     +Y ++I+ L K
Sbjct: 313 LKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLK 372

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
                 A +L   M V G +P+  TY  +I G+ + G+   AV++ E M
Sbjct: 373 GGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 3/221 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    + G  + A  ++ ++  K  +  I  ++  +    ++       
Sbjct: 216 CAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQ 275

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L KEM S G + N+ T+++V+  LCK   L+EA  L   M +S I PN+  + ++I   
Sbjct: 276 ELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGM 335

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G LE A +LF  + V     + P  VT+  +I+G  K G    A E+   M   G  
Sbjct: 336 CTFGKLEAARELFSNLFV---KGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCL 392

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
            N  TY  +I G+ R G +  A+RL +EMV +G   ++  +
Sbjct: 393 PNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTF 433


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 166/613 (27%), Positives = 302/613 (49%), Gaps = 28/613 (4%)

Query: 50  ILEQMAPSLTNS---LVNRVVSEFRKSPK--LALEFYTWVGENNRFSHSLESSCAIVHLL 104
           +L++M  S  ++   L N  +  F K  K  +A +F+  + E N       +  +++ +L
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVL 283

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
               R D+A+ +  +L   N   P  +                 ++ ++      G  + 
Sbjct: 284 CKANRLDEAVEMFEHL-EKNRRVPCTY----------------AYNTMIMGYGSAGKFDE 326

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           AY ++++ + KG   S+ A+N  L+ L K+ ++    ++++EM       N++T+N++I 
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKK-DAAPNLSTYNILID 385

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC+  KL+ A  L   M K+G++PNV   N++++  C+   L+ A  +F +M       
Sbjct: 386 MLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDY---KV 442

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P+ +T   +I+G  K+GRV+ A +I   M+ +    N   Y +LI  +   G  E+  
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++  +MV +   P+  + N+ +  +F  G+ E    +  ++  +   PD  +YSIL  GL
Sbjct: 503 KIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGL 562

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G   + ++L   + E+  V D  +YNI+I+  CK   +  A QLL  M  +G  P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TYG++IDG  K   ++ A  ++E  K    + N+VIY+S+I+G  K   +D A  +L+ 
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             + GL   + T+N+L++      +I EA   F  M+ +    N+V Y ILIN LCK   
Sbjct: 683 LMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
           + +A    + M   G+ P  ++YTT+++  +K  +  E   L D    +G  PD+  YNA
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802

Query: 644 IISPLLGEKSAED 656
           +I  L     A D
Sbjct: 803 MIEGLSNGNRAMD 815



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 256/573 (44%), Gaps = 22/573 (3%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           A+E++ W        H  ES  +++ ++   R FD    ++G +  A          G  
Sbjct: 81  AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA----------GFG 130

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
            S   C         +V +C +       +DV+Q ++      +  A+   +     +N 
Sbjct: 131 PSVNTCIE-------MVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNH 183

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
                 L+++M   GY   V+ F  +I    KE +++ ALSL   M  S +  ++V +N+
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
            I+   +VG ++ A K F +   +  + + P+ VT+  +I   CK  R++ A E+   + 
Sbjct: 244 CIDSFGKVGKVDMAWKFFHE---IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           K         Y T+I GY   G  +EA  L +    +G +P+ + YN  +  L   G V+
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL V  +M  K   P+  TY+IL   LCR G +  AF+L + + +  +  +  + NI++
Sbjct: 361 EALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMV 419

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + LCKS  L  A  +   M  +   PD IT+ +LIDG  K G ++ A ++YE M   + +
Sbjct: 420 DRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCR 479

Query: 497 PNLVIYNSII-NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
            N ++Y S+I N        D  K       +    D    NT ++  F  G+  +  AM
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F E+++     +   Y+ILI+ L K G   +  EL   M   G + D   Y  ++  F K
Sbjct: 540 FEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                +  +L ++M   G  P   TY ++I  L
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 194/405 (47%), Gaps = 7/405 (1%)

Query: 187 FLSHLVKLNEIGRF---WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           F S +  L ++GR    +K+Y++M+      N   +  +I       + E+   +Y  M+
Sbjct: 450 FCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMV 509

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
                P++   N  ++   + G+ E    +F ++        +P++ +++ +I+G  K G
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI---KSRRFVPDARSYSILIHGLIKAG 566

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
                 E+ Y+M + G   + R Y  +IDG+ + G   +A +L +EM  +G  P  V Y 
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L     ++ A  +  +   K I  +   YS L  G  + G + +A+ +  +++++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  + Y++N L++ L K+  +  A     SM      P+ +TYG LI+G CK      A
Sbjct: 687 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLING 542
              ++ M+K   KP+ + Y ++I+GL K  ++  A +L  +     G+ D+  YN +I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
                +  +AF++F E R  G+ ++     +L++ L K  C +QA
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 187/397 (47%), Gaps = 11/397 (2%)

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKL---KVKGHSVSIHAW-NNFLSHLVK 193
            Y++C      F +L+    ++G  + AY + +K+     + +S+   +   NF +H  K
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
             E G   K+YK+MV+     ++   N  +  + K  + E+  +++  +      P+   
Sbjct: 499 --EDGH--KIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARS 554

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           ++++I+   + G   FA + +     M     + ++  +N +I+GFCK G+V  A ++  
Sbjct: 555 YSILIHGLIKAG---FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M   G +  V TY ++IDG A+    +EA  L +E   + +  N V+Y+S I      G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A  +L +++ K + P+ +T++ L   L +   + +A      + E     +  +Y 
Sbjct: 672 RIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ILIN LCK      A      M  +G+ P  I+Y T+I G  K GNI  A  +++  K  
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
              P+   YN++I GL        A SL + ++R GL
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 278/525 (52%), Gaps = 7/525 (1%)

Query: 135 LLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L +  +  K+ P V+  + ++     +G    AY ++++ K KG   S+ A+N  L+ L 
Sbjct: 329 LFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLG 388

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +  ++    ++ + M       N+ ++N++I  LCK  +LE AL +   M ++G++PN++
Sbjct: 389 RKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNII 447

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             N++I+  C+   L+ A  +F  +G +      P+SVT   +I+G  + G+V  A  + 
Sbjct: 448 TVNIMIDRLCKAQRLDEACSIF--LG-LDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLY 504

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M+ +G   N   Y +LI  + + G  E+  ++  EM+ RG  P+ ++ N+ +  +F  
Sbjct: 505 EKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA 564

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G++E    +  ++  + + PD  +YSIL  GL + G  K  +KL  ++ E+ +  D  +Y
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAY 624

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NI+I+  CKS  +  A QLL  M  +GL P ++TYG++IDG  K   ++ A  ++E  K 
Sbjct: 625 NIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 684

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
                N+V+Y+S+I+G  K   +D A  +L+   + GL  +  T+N L++      +I E
Sbjct: 685 KAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDE 744

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A   F  M+N+    N+V Y+I++N LCK   + +A    + M   G+ P+ +TYTT+++
Sbjct: 745 ALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMIS 804

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             ++  +  E  +L +    SG  PD+  YNA+I  L     A D
Sbjct: 805 GLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMD 849



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 271/601 (45%), Gaps = 33/601 (5%)

Query: 52  EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD 111
           E   P L   ++ R+     K  ++AL ++ WV    +  HS E+  A++ L+   R   
Sbjct: 95  EMPQPELVVGVIRRL-----KDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRN-- 147

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA--VFDALVRACTQIGATEGAYDVI 169
                            LE+LE +L+   +    P+      +V +  +      A+ VI
Sbjct: 148 -----------------LEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVI 190

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           + ++      +  A+   +  L   +E      L ++M   GY   V+ F  +I    +E
Sbjct: 191 ETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFARE 250

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +++ ALSL   M  +    ++V +N+ I+   +VG ++ A K F +   +    ++P+ 
Sbjct: 251 GRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHE---LKSQGLVPDD 307

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAM-IKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           VT   +I   CK  RV+ A E+   +     + C V  Y T+I GY   G   EA  L +
Sbjct: 308 VTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC-VYAYNTMIMGYGSVGKFNEAYSLLE 366

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
              ++G +P+ + YN  +  L  +G VE AL +L  M      P+  +Y+IL   LC+ G
Sbjct: 367 RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAG 425

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            ++ A K+ + + E  +  +  + NI+I+ LCK+  L  A  +   +  +   PD +T+ 
Sbjct: 426 ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFC 485

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQR 527
           +LIDG  + G +  A  +YE M    + PN V+Y S+I    K     D  K   +   R
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
               D +  N  ++  F  G+I +  A+F E++  G+  +   Y+ILI+ L K G  +  
Sbjct: 546 GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDT 605

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            +L   M   G+  D   Y  ++  F K+    +  +L ++M   G+ P   TY ++I  
Sbjct: 606 YKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDG 665

Query: 648 L 648
           L
Sbjct: 666 L 666



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 179/359 (49%), Gaps = 5/359 (1%)

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           E +LDS +   A   V+ +L+R   + G  E  + + +++  +G S  +   NN++  + 
Sbjct: 505 EKMLDSGQTPNAV--VYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVF 562

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  EI +   L++E+ + G   +V +++++I+ L K    ++   L+Y M + G+  +  
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTR 622

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N++I+  C+ G +  A +L  +M       + P  VT+  +I+G  K+ R++ A  + 
Sbjct: 623 AYNIVIDGFCKSGKVNKAYQLLEEMKT---KGLQPTVVTYGSVIDGLAKIDRLDEAYMLF 679

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
                  +D NV  Y++LIDG+ + G  +EA  + +E++++GL PN   +N  +  L   
Sbjct: 680 EEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKA 739

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            +++ AL    +M +    P+  TYSI+  GLC+     +AF    ++ ++ +  +  +Y
Sbjct: 740 EEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITY 799

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
             +I+ L +  N+  AK L       G IPD   Y  +I+G         A  ++E  +
Sbjct: 800 TTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETR 858



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 194/403 (48%), Gaps = 4/403 (0%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           + +  L +  ++   + LY++M+  G   N   +  +I    K  + E+   +Y  M+  
Sbjct: 486 SLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR 545

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+++  N  ++   + G++E    LF ++       + P+  +++ +I+G  K G  
Sbjct: 546 GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEI---KAQGLTPDVRSYSILIHGLVKGGFS 602

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           +   ++ Y M + G+  + R Y  +IDG+ + G   +A +L +EM  +GL P  V Y S 
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L     ++ A  +  +   K +  +   YS L  G  + G + +A+ +  +++++ +
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             + Y++N L++ L K+  +  A     +M      P+ +TY  +++G CK      A  
Sbjct: 723 TPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFV 782

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYF 544
            ++ M+K   KPN + Y ++I+GL +  ++  AK L +  +  G + D+  YN +I G  
Sbjct: 783 FWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLS 842

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
              K  +A+ +F E R  G  +      +L++ L K  C +QA
Sbjct: 843 NANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 3/338 (0%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           + G  E    + +++K +G +  + +++  +  LVK       +KL+ EM   G   +  
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTR 622

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +N+VI   CK  K+ +A  L   M   G+ P VV +  +I+   ++  L+ A  LF + 
Sbjct: 623 AYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 682

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                 +V  N V ++ +I+GF K+GR++ A  I   +++ G+  N  T+  L+D   + 
Sbjct: 683 ---KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKA 739

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              +EAL     M      PN V Y+  ++ L        A     +M  + + P+  TY
Sbjct: 740 EEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITY 799

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + +  GL R G V +A  L  +      + D+  YN +I  L  +N    A  L     +
Sbjct: 800 TTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRL 859

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +G      T   L+D   K   +E A  V   ++++ K
Sbjct: 860 KGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 897



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 36/229 (15%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN L+  + ++ NL   +Q+L  M + G  P   T   ++  + K   +  A  V E M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
           +K + +P    Y ++I  L      D   +LL+  Q IG    +  + TLI  +   G++
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             A ++  EM++     + V YN+ I+   K G    A +    +   G++P        
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVP-------- 305

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
                                      D+ T+ ++I  L   +  ++ V
Sbjct: 306 ---------------------------DDVTFTSMIGVLCKAERVDEAV 327


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 261/512 (50%), Gaps = 27/512 (5%)

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           +C+++      +  I KL   G   ++  ++  L  L   + I     L+ +M       
Sbjct: 125 SCSKLPFALSTFGKITKL---GFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----P 177

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV TF  ++  LC+E ++ EA++L  RML+ G+ PN + +  I++  C++GD   AL L 
Sbjct: 178 NVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 237

Query: 275 RKMGVMSGDSVLPNSVT-----HNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYA 328
           RKM  +S   + PN V        C+INGFC  GR   A+++   M+ +  I  +V TY 
Sbjct: 238 RKMEEVS--HIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LI+ + + G   EA  L DEM+ RG++P+ + Y+S I     +  ++ A  +   M  K
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK 355

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  T++ L  G CR   V    KL +++ E  +V +  +Y  LI+  C+  +L AA
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 415

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-----------KP 497
           + LL  M+  G+ P+++T  TL+DG C  G ++ A+++++ M+K +            +P
Sbjct: 416 QDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEP 475

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           ++  YN +I+GL  +     A+ L +     G++ D ITYN++I+G     ++ EA  MF
Sbjct: 476 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMF 535

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             M +   + N V +  LIN  CK G      EL   M   GI+ + +TY TL+  F K 
Sbjct: 536 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKV 595

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +    +++  +M+ SGV PD  T   +++ L
Sbjct: 596 GNINGALDIFQEMMASGVYPDTITIRNMLTGL 627



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 249/508 (49%), Gaps = 26/508 (5%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +I   E A D+   +       S+  +   +  +V++  +     L+++M       N  
Sbjct: 55  EIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAY 114

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +F +++   C   KL  ALS + ++ K G  P VV F+ +++  C    +  AL LF +M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                    PN VT   ++NG C+ GRV  A  +   M++ G+  N  TY T++DG  + 
Sbjct: 175 -------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227

Query: 338 GSSEEALRLCDEMVK-RGLMPNNVVY-----NSTIHWLFAEGDVEGALFVLSDMID-KHI 390
           G +  AL L  +M +   + PN V++        I+   + G    A  +L +M++ K I
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  TY+ L     + G   +A +L++++L   ++    +Y+ +I+  CK N L AA+ 
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   M  +G  PDIIT+ TLI GYC+   ++  +++   M +     N + Y ++I+G C
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFC 407

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV------- 562
           +   L+AA+ LLQ     G+  + +T NTL++G   NGK+ +A  MF  M+         
Sbjct: 408 QVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDAS 467

Query: 563 ----GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
               G+  +   YNILI+ L   G + +A EL + M   GI+PD +TY +++    K   
Sbjct: 468 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSR 527

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            +E  ++ D M     SP+  T+  +I+
Sbjct: 528 LDEATQMFDSMGSKSFSPNVVTFTTLIN 555



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 185/368 (50%), Gaps = 14/368 (3%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           + L+ K  S  +  +N  ++  VK  +     +LY EM+  G + +  T++ +I   CK+
Sbjct: 280 EMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQ 339

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +L+ A  ++Y M   G  P+++ FN +I   C+   ++  +KL  +M   +   ++ N+
Sbjct: 340 NRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM---TEAGLVANT 396

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           +T+  +I+GFC++G +  A+++   M+ +G+  NV T  TL+DG    G  ++AL +   
Sbjct: 397 ITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 456

Query: 350 MVKR-----------GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           M K            G+ P+   YN  I  L  EG    A  +  +M  + I PD  TY+
Sbjct: 457 MQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYN 516

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            +  GLC+   + +A ++ + +  +    +  ++  LIN  CK+  +    +L   M  R
Sbjct: 517 SVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 576

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G++ + ITY TLI G+ K GNI GA+ +++ M      P+ +   +++ GL     L  A
Sbjct: 577 GIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRA 636

Query: 519 KSLLQASQ 526
            ++L+  Q
Sbjct: 637 VAMLEDLQ 644



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 182/362 (50%), Gaps = 16/362 (4%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K +P V  ++AL+ A  + G    A ++  ++  +G   S   +++ +    K N +   
Sbjct: 286 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAA 345

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             ++  M + G   ++ TFN +I   C+  ++++ + L + M ++G+  N + +  +I+ 
Sbjct: 346 EHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-- 318
            CQVGDL  A  L ++M V SG  V PN VT N +++G C  G+++ A E+  AM K+  
Sbjct: 406 FCQVGDLNAAQDLLQEM-VSSG--VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462

Query: 319 ---------GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                    G++ +V+TY  LI G    G   EA  L +EM  RG++P+ + YNS IH L
Sbjct: 463 DIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGL 522

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +  ++ A  +   M  K   P+  T++ L  G C+ G V    +L  ++    +V +A
Sbjct: 523 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA 582

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +Y  LI+   K  N+  A  +   M+  G+ PD IT   ++ G      ++ AV + E+
Sbjct: 583 ITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLED 642

Query: 490 MK 491
           ++
Sbjct: 643 LQ 644


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 186/636 (29%), Positives = 305/636 (47%), Gaps = 26/636 (4%)

Query: 32  EDIVFRAICVNLRQRKWKILEQMAPS------LTN-SLVNRVVSEFRKSPKLALEFYTWV 84
           +D++F  I    +++ W    Q   S      +T+  L+ RV+   R+ P +AL F+  V
Sbjct: 74  KDLIFNTI----QEKPWAFCNQNWVSDKFNSVITDPQLLIRVLYSIREKPTIALRFFKCV 129

Query: 85  GENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEIC-- 142
                F  S  + CAI+ +LV+      A  +M  ++S      ++ L G   +Y+    
Sbjct: 130 LTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGIVDVLIGGYLNYQCLLV 189

Query: 143 --KATPAVFDALVRACTQI-------GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
             K     F   V+ C +I            A +V + +   G   ++  +N  L    K
Sbjct: 190 FEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCK 249

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
             E+ R   L  +M   G   +  TFN++I  L K+ +L++A  L   M K+G+  +   
Sbjct: 250 GGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYT 309

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +N +I   C+ G L  AL L+ +M V  G  V P   +HN I+ GFCK G++  A +   
Sbjct: 310 YNPLICGYCKKGLLVEALALWEEM-VTRG--VSPTVASHNTIMYGFCKEGKMSDARQQLS 366

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M+K  +  ++ +Y TLI G+ R G+  EA  L DE+  R L  N V YN+ I  L   G
Sbjct: 367 DMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLG 426

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           D+E AL +  DMI++ I PD  TY++L  G C+ G +  A +  +++L   +  D ++Y 
Sbjct: 427 DLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYT 486

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
             I    K  + A A +L   M+ +G  PD+ITY   ++G CK GN+E A ++ + M + 
Sbjct: 487 ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD 546

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEA 552
              P+ V Y S ++   ++  L   + +      R      +TY  LI+ + +NG++  A
Sbjct: 547 GHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWA 606

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            A F EM+  G+  N + YN+LIN  CK     QA +    M   GI P+  TYT L+  
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINE 666

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                  +E + L+  M+   + PD+ T+ A++  L
Sbjct: 667 NCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL 702



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 235/492 (47%), Gaps = 38/492 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   F+ L+   ++ G  + A  +IQ++   G  VS + +N  +    K   +    
Sbjct: 268 CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEAL 327

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L++EMV+ G    V + N ++Y  CKE K+ +A      MLK  + P+++ +N +I   
Sbjct: 328 ALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGF 387

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++G++  A  L  ++      ++  N VT+N +I+G C+LG +E A +++  MI  GI 
Sbjct: 388 CRLGNIGEAFILLDELRF---RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIH 444

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY  L++G  + G+   A    DEM+  GL P+   Y + I      GD   A  +
Sbjct: 445 PDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKL 504

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ K   PD  TY++   GLC+ G +++A +L  +++ +  V D  +Y   ++   +
Sbjct: 505 QEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHME 564

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L   +++   M+ RG  P ++TY  LI  +   G ++ A+  +  M++    PN++ 
Sbjct: 565 NGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVIT 624

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YN +ING CK   +D                                  +A   F EM+ 
Sbjct: 625 YNVLINGFCKVRKMD----------------------------------QACKFFIEMQE 650

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            GI  NK  Y ILIN  C  G +Q+A  L   M+   I PD  T+  L+ +  K+   + 
Sbjct: 651 KGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQA 710

Query: 622 VIELHDDMVLSG 633
           V +  + ++L G
Sbjct: 711 V-QFIESLILDG 721



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 3/282 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  LV    ++G    A +   ++   G +    A+   +   +KL +  + +KL +EM
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           ++ G+  +V T+N+ +  LCK   LEEA  L  +M++ G  P+ V +   ++   + G L
Sbjct: 509 LTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHL 568

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
               ++F  M +  G +  P  VT+  +I+     GR+++A      M + G+  NV TY
Sbjct: 569 REGREIFYDM-LSRGQT--PTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITY 625

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI+G+ +    ++A +   EM ++G+ PN   Y   I+     G  + AL + + M+ 
Sbjct: 626 NVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLG 685

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
           K I PD  T+  L K L ++  V+    + + +L+     DA
Sbjct: 686 KRIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDRTIDA 727



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 1/172 (0%)

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYF 544
           V+E M +    P++   N I+  L     L  A  + +     G+   +T YNT+++ + 
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G++  A  +  +M+  G   ++V +N+LIN L K G  QQA+ L++ M   G+     
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           TY  L+  + K     E + L ++MV  GVSP   ++N I+     E    D
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSD 360


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 175/638 (27%), Positives = 308/638 (48%), Gaps = 63/638 (9%)

Query: 67  VSEFRKSPKLALEFYTWVGENNRFSHSLES-SCAIVHL------------LVNWRRFDDA 113
           V  ++  P  AL+ +  V   + F H+LE+  C I  L            L   R+  D+
Sbjct: 13  VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDS 72

Query: 114 LLLMG-------NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAY 166
            +L G       +      V     +   +D Y+ C+ +   ++A++    + G    A+
Sbjct: 73  KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYD-CEPSVQSYNAIMNILVEYGYFSQAH 131

Query: 167 DVIQKLK-------VKGHSVSIHAW-------------NNFLSHLVKLNE------IGRF 200
            V  ++K       V  H++ + ++             NN      + N       I  F
Sbjct: 132 KVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191

Query: 201 WK---------LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           +K         L+ EM+  G   ++ TFN +I+ LCK+  ++E+  L+ +++K G+ PN+
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN+ I   C+ G ++ A +L   +     + + P+ +++N +I GFCK  ++  AE  
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESI---VSEGLTPDVISYNTLICGFCKHSKLVEAECY 308

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
            + M+ +G++ N  TY T+I+G+ + G  + A ++  + + +G +P+   Y+S I+ L  
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +GD+  A+ V  + ++K        Y+ L KGL + G V QA +L   ++E     D ++
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YN+++N LCK   L+ A  +L+  I +G IPDI T+ TLIDGYCK  N++ A+++ + M 
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
                P+++ YN+++NGLCK   LD      +A    G   + ITYN LI  +  + K++
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT--YTT 608
           EA  +F EM+  G+  + V    LI  LC  G   +A EL  V I       Y T  +  
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF-VTIEKEYKFSYSTAIFNI 607

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           ++  F +  +     +L   M  S  +PDN TY  +I 
Sbjct: 608 MINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 231/432 (53%), Gaps = 4/432 (0%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ K++EA++++ RM      P+V  +N I+N   + G    A K++ +M  +    + P
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG---IYP 144

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  TH   +  FC  GR   A  +   M   G + N  +Y  +I G+ +     EA  L 
Sbjct: 145 DVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLF 204

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           DEM+K+G+ P+ + +N  IH L  +G+V+ +  + S ++ + +CP+ FT++I  +GLCR 
Sbjct: 205 DEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRK 264

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + +A +L   ++ E +  D  SYN LI   CK + L  A+  L  M+  G+ P+  TY
Sbjct: 265 GAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTY 324

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            T+I+G+CK G ++ A ++  +       P+   Y+S+INGLC D  ++ A ++   +  
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384

Query: 528 IGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G   +I  YNTL+ G    G + +A  +  +M   G + +   YN+++N LCK GC   
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  ++   I  G IPD  T+ TL+  + K  + ++ IE+ D M+  G++PD  TYN +++
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 647 PLLGEKSAEDQV 658
            L   +  ++ V
Sbjct: 505 GLCKARKLDNVV 516



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 255/511 (49%), Gaps = 42/511 (8%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           AY +  ++  +G    I  +N  +  L K   +    KL+ +++  G   N+ TFN+ I 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC++  ++EA  L   ++  G+ P+V+ +N +I   C+   L  A     KM V SG  
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM-VNSG-- 316

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           V PN  T+N IINGFCK G ++ A++I R AM K  I  +  TY++LI+G    G    A
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP-DEFTYSSLINGLCNDGDMNRA 375

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           + +  E +++G   + ++YN+ +  L  +G V  AL ++ DM++    PD +TY+++  G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+ GC+  A  + N  + +  + D +++N LI+  CK  N+  A ++L +M+  G+ PD
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           +ITY TL++G CK   ++  V  ++ M +    PN++ YN +I   CKD  +  A  L +
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF-----------------------SEM 559
             +  GL  D +T  TLI G   NG++ +A+ +F                        E 
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEK 615

Query: 560 RNVGIA---VNKVG----------YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            NV +A    +K+G          Y ++I+  CK G    A   +   I  G++P + T 
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTC 675

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
             ++          E + + + MV +G+ P+
Sbjct: 676 GKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 192/417 (46%), Gaps = 41/417 (9%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV--RTY 327
           ALK+F +  V + D       T+ C+I      G+ E  E++  A ++  +D  +    Y
Sbjct: 23  ALKMFNQ--VKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDV-LAEMRKNVDSKMLEGVY 79

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++  Y R G  +EA+ + + M      P+   YN+ ++ L   G    A  V   M D
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I PD +T++I  K  C  G    A +L N +  +    +A SY  +I+   K N    
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   M+ +G+ PDI+T+  LI   CK GN++ + +++  + K    PNL  +N  I 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC+  ++D A  LL++    GL  D I+YNTLI G+  + K+ EA     +M N G+  
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT------------------- 607
           N+  YN +IN  CK G  Q A ++++  +  G IPD  TY+                   
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 608 ----------------TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                           TLV   SK     + ++L  DM+  G SPD  TYN +++ L
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 21/412 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +L+      G    A  V  +   KG   SI  +N  +  L K   + +  +L K+M
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   ++ T+NLV+  LCK   L +A  +    +  G  P++  FN +I+  C+  ++
Sbjct: 418 MEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNM 477

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+++   +  M    + P+ +T+N ++NG CK  +++   +   AM++ G   N+ TY
Sbjct: 478 DKAIEI---LDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY 534

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--LFVLSDM 385
             LI+ + +     EA+ L  EM  RGL P+ V   + I  L + G+++ A  LFV    
Sbjct: 535 NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV---T 591

Query: 386 IDKHICPDHFTYS-----ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           I+K      F+YS     I+    C    V  A KL +++       D Y+Y ++I+  C
Sbjct: 592 IEKEY---KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYC 648

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+ N+  A   L   I +GL+P   T G +++  C    +  AV +   M +    P  V
Sbjct: 649 KTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEA 552
             NSI     K+ +  A K +++   +   +   +Y  L +G   N K+ EA
Sbjct: 709 --NSIFEADKKEVA--APKIVVEYLLKKSHITYYSYELLYDG-IRNRKVVEA 755



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 13/285 (4%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           + L  MG L  AN +      +G       C      F+ L+    +    + A +++  
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKG-------CIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G +  +  +N  L+ L K  ++      +K M+  G   N+ T+N++I + CK+ K
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + EA+ L+  M   G+ P++V    +I   C  G+L+ A +LF  + +        ++  
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF--VTIEKEYKFSYSTAI 604

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSSEEALRLCDE 349
            N +IN FC+   V  AE++ + M   G DC  +  TY  +ID Y + G+ + A     E
Sbjct: 605 FNIMINAFCEKLNVSMAEKLFHKM--GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + +GL+P+       ++ L     +  A+ +++ M+   I P+ 
Sbjct: 663 NISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 257/495 (51%), Gaps = 8/495 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +++L+    +    + A ++ + +K    S S+  +N  L  L +  ++ R  
Sbjct: 6   CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L++EM+      +V +FN+++  LC+  K+E AL  ++R +     PNV+ ++++I+  
Sbjct: 66  ALFQEMLD-RRSHDVISFNILVTGLCRAGKIETALE-FFRKMDDRCSPNVITYSVLIDGL 123

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   +  A++L   M         P+ +T+  +++G CK  +V  A E+   M+ AG  
Sbjct: 124 CKANRVSQAVELLESM---KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+ TY +L+ G  R     +AL L  +M  RG  PN V Y + I  L   G V+ A  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L+DMIDK   PD   Y++L  GLC+   V ++  L  + +   +  D  +Y+ +I  LC+
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           SN L  A +LL  +  RG  PD+I Y TLIDG CK G ++ A  +YE M       ++V 
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+++I+GLCK   +D A  LL    R+G   + +TYN+LI G      + EA  +  EM 
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 420

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQAR-ELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               A + V YNILI+ +C+      A  +  + MI +G+IPD++TY+ L+    K+   
Sbjct: 421 RSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480

Query: 620 EEVIEL-HDDMVLSG 633
            E+  L  D MV  G
Sbjct: 481 HELRHLVLDQMVQLG 495



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/487 (31%), Positives = 252/487 (51%), Gaps = 13/487 (2%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           ++  G   ++  +N+ +  L K NE  R  +L++ M S     ++ T+N ++  L +  K
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           LE A++L+  ML      +V+ FN+++   C+ G +E AL+ FRKM     D   PN +T
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKM----DDRCSPNVIT 115

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ +I+G CK  RV  A E+  +M   G   +V TY  L+DG  +      A  +  EM+
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G +PN V YNS +H L     V  AL ++ DM  +   P+  TY  L  GLC+ G VK
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A  +   ++++    D   YN+LIN LCK++ +  +  LL   +  G+ PD++TY ++I
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
            G C+   ++ A ++   +K     P++++Y+++I+GLCK   +D A  L +     G  
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D +TY+TLI+G    G++ EA  + + M  +G   + + YN LI  LC      +A EL
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 415

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV----IELHDDMVLSGVSPDNQTYNAIIS 646
           ++ M      P  VTY  L+      C  E V    ++   +M+ +GV PD+ TY+ ++ 
Sbjct: 416 VEEMERSNCAPSAVTYNILIHGM---CRMERVDSAALDYFQEMIDNGVIPDHITYSILLE 472

Query: 647 PLLGEKS 653
            L   K 
Sbjct: 473 GLKKSKD 479



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 134/272 (49%), Gaps = 4/272 (1%)

Query: 389 HIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           H C P+  TY+ L  GLC+N    +A +L   +          +YN L++ L ++  L  
Sbjct: 4   HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLER 63

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   M+ R    D+I++  L+ G C+ G IE A++ +  M      PN++ Y+ +I+
Sbjct: 64  AMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLID 121

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK   +  A  LL++ +  G   D ITY  L++G     K+A A+ +  EM + G   
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V YN L++ LC+      A  LM+ M   G  P+ VTY TL+    K    ++   + 
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            DM+  G +PD   YN +I+ L      ++ +
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESI 273


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 302/613 (49%), Gaps = 28/613 (4%)

Query: 50  ILEQMAPSLTNS---LVNRVVSEFRKSPK--LALEFYTWVGENNRFSHSLESSCAIVHLL 104
           +L++M  S  ++   L N  +  F K  K  +A +F+  + E N       +  +++ +L
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVL 283

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
               R D+A+ +  +L   N   P  +                 ++ ++      G  + 
Sbjct: 284 CKANRLDEAVEMFEHL-EKNRRVPCTY----------------AYNTMIMGYGSAGKFDE 326

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           AY ++++ + KG   S+ A+N  L+ L K+ ++    K+++EM       N++T+N++I 
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILID 385

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC+  KL+ A  L   M K+G++PNV   N++++  C+   L+ A  +F +M       
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY---KV 442

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P+ +T   +I+G  K+GRV+ A ++   M+ +    N   Y +LI  +   G  E+  
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++  +M+ +   P+  + N+ +  +F  G+ E    +  ++  +   PD  +YSIL  GL
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G   + ++L   + E+  V D  +YNI+I+  CK   +  A QLL  M  +G  P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TYG++IDG  K   ++ A  ++E  K    + N+VIY+S+I+G  K   +D A  +L+ 
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             + GL   + T+N+L++      +I EA   F  M+ +    N+V Y ILIN LCK   
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
           + +A    + M   G+ P  ++YTT+++  +K  +  E   L D    +G  PD+  YNA
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802

Query: 644 IISPLLGEKSAED 656
           +I  L     A D
Sbjct: 803 MIEGLSNGNRAMD 815



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 256/578 (44%), Gaps = 32/578 (5%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           A+E++ W        H  ES  +++ ++   R FD    ++G +  A          G  
Sbjct: 81  AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA----------GFG 130

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
            S   C         +V  C +       YDV+Q ++      +  A+   +     +N 
Sbjct: 131 PSVNTCIE-------MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
                 L+++M   GY   V+ F  +I    KE +++ ALSL   M  S +  ++V +N+
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
            I+   +VG ++ A K F +   +  + + P+ VT+  +I   CK  R++ A E+   + 
Sbjct: 244 CIDSFGKVGKVDMAWKFFHE---IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           K         Y T+I GY   G  +EA  L +    +G +P+ + YN  +  L   G V+
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL V  +M  K   P+  TY+IL   LCR G +  AF+L + + +  +  +  + NI++
Sbjct: 361 EALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + LCKS  L  A  +   M  +   PD IT+ +LIDG  K G ++ A +VYE M   + +
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQ------ASQRIGLLDAITYNTLINGYFINGKIA 550
            N ++Y S+I         +    + +       S  + LL     NT ++  F  G+  
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL-----NTYMDCMFKAGEPE 534

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +  AMF E++      +   Y+ILI+ L K G   +  EL   M   G + D   Y  ++
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             F K     +  +L ++M   G  P   TY ++I  L
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 194/405 (47%), Gaps = 7/405 (1%)

Query: 187 FLSHLVKLNEIGRF---WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           F S +  L ++GR    +K+Y++M+      N   +  +I       + E+   +Y  M+
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
                P++   N  ++   + G+ E    +F ++        +P++ +++ +I+G  K G
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI---KARRFVPDARSYSILIHGLIKAG 566

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
                 E+ Y+M + G   + R Y  +IDG+ + G   +A +L +EM  +G  P  V Y 
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L     ++ A  +  +   K I  +   YS L  G  + G + +A+ +  +++++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  + Y++N L++ L K+  +  A     SM      P+ +TYG LI+G CK      A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLING 542
              ++ M+K   KP+ + Y ++I+GL K  ++  A +L  +     G+ D+  YN +I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
                +  +AF++F E R  G+ ++     +L++ L K  C +QA
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 187/397 (47%), Gaps = 11/397 (2%)

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKL---KVKGHSVSIHAW-NNFLSHLVK 193
            Y++C      F +L+    ++G  + AY V +K+     + +S+   +   NF +H  K
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
             E G   K+YK+M++     ++   N  +  + K  + E+  +++  +      P+   
Sbjct: 499 --EDGH--KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           ++++I+   + G   FA + +     M     + ++  +N +I+GFCK G+V  A ++  
Sbjct: 555 YSILIHGLIKAG---FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M   G +  V TY ++IDG A+    +EA  L +E   + +  N V+Y+S I      G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A  +L +++ K + P+ +T++ L   L +   + +A      + E     +  +Y 
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ILIN LCK      A      M  +G+ P  I+Y T+I G  K GNI  A  +++  K  
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
              P+   YN++I GL        A SL + ++R GL
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/624 (24%), Positives = 304/624 (48%), Gaps = 45/624 (7%)

Query: 26  FANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVG 85
           FA+  ++ ++       L++  ++ L  ++ + T    + ++ + +    L L+F  W  
Sbjct: 15  FASSPSDSLLADKALTFLKRHPYQ-LHHLSANFTPEAASNLLLKSQNDQALILKFLNWAN 73

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA---NSVSPLEFLEGLLDSYEIC 142
            +  F+  L   C  +H+L  ++ +  A +L  ++ +    +  + L F + L ++Y++C
Sbjct: 74  PHQFFT--LRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVF-KSLQETYDLC 130

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
            +T +VFD +V++ +++   + A  ++   +  G    + ++N  L   ++         
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR------ 184

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
                 +  + ENV                      +  ML+S + PNV  +N++I   C
Sbjct: 185 ------NISFAENV----------------------FKEMLESQVSPNVFTYNILIRGFC 216

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G+++ AL LF KM        LPN VT+N +I+G+CKL +++   ++  +M   G++ 
Sbjct: 217 FAGNIDVALTLFDKM---ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+ +Y  +I+G  R G  +E   +  EM +RG   + V YN+ I     EG+   AL + 
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M+   + P   TY+ L   +C+ G + +A +  +Q+    +  +  +Y  L++   + 
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A ++L  M   G  P ++TY  LI+G+C  G +E A+ V E+MK+    P++V Y
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +++++G C+   +D A  + +     G+  D ITY++LI G+    +  EA  ++ EM  
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           VG+  ++  Y  LIN  C  G  ++A +L   M+  G++PD VTY+ L+   +K     E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
              L   +      P + TY+ +I
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLI 597



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/434 (31%), Positives = 234/434 (53%), Gaps = 5/434 (1%)

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG-DLEFALKLFR 275
           + F+LV+ +  +   +++ALS+ +     G  P V+ +N +++   +   ++ FA  +F+
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M       V PN  T+N +I GFC  G ++ A  +   M   G   NV TY TLIDGY 
Sbjct: 195 EM---LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           +    ++  +L   M  +GL PN + YN  I+ L  EG ++   FVL++M  +    D  
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY+ L KG C+ G   QA  +H ++L   +     +Y  LI+ +CK+ N+  A + L  M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
            VRGL P+  TY TL+DG+ + G +  A +V   M      P++V YN++ING C    +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431

Query: 516 DAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           + A ++L+  +  GL  D ++Y+T+++G+  +  + EA  +  EM   GI  + + Y+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I   C+    ++A +L + M+  G+ PD  TYT L+  +      E+ ++LH++MV  GV
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551

Query: 635 SPDNQTYNAIISPL 648
            PD  TY+ +I+ L
Sbjct: 552 LPDVVTYSVLINGL 565



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 156/542 (28%), Positives = 264/542 (48%), Gaps = 24/542 (4%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSAN--SVSPLEFLEGLLDSYEICKATPAVF-- 149
           ++ + +IVHL      F   +L    ++ A   S   + F E +       + +P VF  
Sbjct: 150 IDKALSIVHL-AQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTY 208

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           + L+R     G  + A  +  K++ KG   ++  +N  +    KL +I   +KL + M  
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   N+ ++N+VI  LC+E +++E   +   M + G   + V +N +I   C+ G+   
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL +  +M +  G  + P+ +T+  +I+  CK G +  A E    M   G+  N RTY T
Sbjct: 329 ALVMHAEM-LRHG--LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+DG+++ G   EA R+  EM   G  P+ V YN+ I+     G +E A+ VL DM +K 
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  +YS +  G CR+  V +A ++  +++E+ +  D  +Y+ LI   C+      A 
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            L   M+  GL PD  TY  LI+ YC  G++E A+Q++  M +    P++V Y+ +INGL
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565

Query: 510 CKDA-SLDAAKSLLQASQRIGLLDAITYNT---------------LINGYFINGKIAEAF 553
            K + + +A + LL+      +   +TY+T               LI G+ + G + EA 
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +F  M       +   YNI+I+  C+ G  ++A  L K M+  G +   VT   LV   
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685

Query: 614 SK 615
            K
Sbjct: 686 HK 687



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 217/419 (51%), Gaps = 8/419 (1%)

Query: 233 EEALSLYYRMLKSGI---WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
           +E  SL ++ L+      +     F++++    ++  ++ AL +     +      +P  
Sbjct: 113 DEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVH---LAQAHGFMPGV 169

Query: 290 VTHNCIINGFCKLGR-VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           +++N +++   +  R + FAE +   M+++ +  NV TY  LI G+   G+ + AL L D
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +M  +G +PN V YN+ I        ++    +L  M  K + P+  +Y+++  GLCR G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            +K+   +  ++       D  +YN LI   CK  N   A  + + M+  GL P +ITY 
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +LI   CK GN+  A++  + M+     PN   Y ++++G  +   ++ A  +L+     
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409

Query: 529 GLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G   ++ TYN LING+ + GK+ +A A+  +M+  G++ + V Y+ +++  C+     +A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             + + M+  GI PD +TY++L+  F +    +E  +L+++M+  G+ PD  TY A+I+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 198/398 (49%), Gaps = 3/398 (0%)

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           A +  D E+A  +F+ +   + D     S   + ++  + +L  ++ A  I +     G 
Sbjct: 107 AAKTLDDEYASLVFKSLQ-ETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165

Query: 321 DCNVRTYATLIDGYARGGSS-EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              V +Y  ++D   R   +   A  +  EM++  + PN   YN  I      G+++ AL
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   M  K   P+  TY+ L  G C+   +   FKL   +  + +  +  SYN++IN L
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C+   +     +L+ M  RG   D +TY TLI GYCK GN   A+ ++  M +    P++
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y S+I+ +CK  +++ A   L   +  GL  +  TY TL++G+   G + EA+ +  E
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G + + V YN LIN  C  G  + A  +++ M   G+ PD V+Y+T+++ F ++  
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E + +  +MV  G+ PD  TY+++I     ++  ++
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 223/503 (44%), Gaps = 103/503 (20%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L D  E     P V  ++ L+    ++   +  + +++ + +KG   ++ ++N  ++ L 
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +   +     +  EM   GY  +  T+N +I   CKE    +AL ++  ML+ G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGV--------------------------------M 280
            +  +I+  C+ G++  A++   +M V                                M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           + +   P+ VT+N +ING C  G++E A  +   M + G+  +V +Y+T++ G+ R    
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +EALR+  EMV++G+ P+ + Y+S I     +   + A  +  +M+   + PD FTY+ L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               C  G +++A +LHN+++E+ ++ D  +Y++LIN L K +    AK+LL  +     
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586

Query: 461 IPDIITYGTLID------------------------------------------------ 472
           +P  +TY TLI+                                                
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646

Query: 473 --GYCKGGNIEGAVQVYENM----------------KKVEKKPNLVIYNSIINGL---CK 511
             G+C+ G+I  A  +Y+ M                K + K+  +   NS+I  +   C+
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCE 706

Query: 512 DASLDAAKSLLQASQRIGLLDAI 534
            +  + AK L++ + R G +D +
Sbjct: 707 LSEAEQAKVLVEINHREGNMDVV 729



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 20/339 (5%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +P+V  ++AL+      G  E A  V++ +K KG S  + +++  LS   +  ++    +
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + +EMV  G   +  T++ +I   C++ + +EA  LY  ML+ G+ P+   +  +IN  C
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI----------- 311
             GDLE AL+L  +M V  G  VLP+ VT++ +ING  K  R   A+ +           
Sbjct: 532 MEGDLEKALQLHNEM-VEKG--VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588

Query: 312 ----RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
                + +I+   +   ++  +LI G+   G   EA ++ + M+ +   P+   YN  IH
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                GD+  A  +  +M+         T   L K L + G V +   +   VL    + 
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +A    +L+    +  N+     +L+ M   G +P+ I+
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 271/549 (49%), Gaps = 41/549 (7%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS---IHA------------------- 183
           P V++ ++R    +GA +    ++ +++ +GH V    +H+                   
Sbjct: 74  PEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLIL 133

Query: 184 ---------------WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
                          +N+ L+ LV+ +++     +Y EM + G   +V TFN ++ ALC+
Sbjct: 134 NQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR 193

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             ++  A+ +   M   G+ P+   F  ++    + G +E AL++  +M  M   +    
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT--- 250

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            VT N +ING+CKLGRVE A       I  G + +  TY T ++G  +      AL++ D
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            MV+ G  P+   YN  ++ L   G +E A  +L+ M+D+   PD  T++ L   LC   
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            +++A  L  QV  + +  D Y++NILIN LCK  +   A +L   M   G  PD +TY 
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLID  C  G +  A+ + ++M+      + + YN+II+GLCK   ++ A+ +       
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  +AIT+NTLI+G   + KI +AF + ++M + G+  N + YN ++   CK G  ++A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            ++++ M  +G   D VTY TL+    K    +  +++   M + G+ P  + YN ++  
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610

Query: 648 LLGEKSAED 656
           L    +  D
Sbjct: 611 LFRRNNIRD 619



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 267/570 (46%), Gaps = 25/570 (4%)

Query: 84  VGENNRFSHSLESSCAIVHLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           V E  R  H ++    +VH  ++     + FDDA+ L+      N + PL  ++      
Sbjct: 97  VAEMRREGHQVK--LGVVHSFLDSYEGQQLFDDAVDLI-----LNQLQPLFGIQ------ 143

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
               A   V++ L+    +    +    V  ++  +G    +  +N  +  L + +++  
Sbjct: 144 ----ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              + +EM S G   +  TF  ++    +E  +E AL +  RML+ G     V  N++IN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C++G +E AL   ++      D   P+ +T+N  +NG C+   V  A ++   M++ G
Sbjct: 260 GYCKLGRVEDALGYIQQE---IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            D +V TY  +++   + G  EEA  + ++MV RG +P+   +N+ I  L     +E AL
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   +  K + PD +T++IL   LC+ G    A +L  ++       D  +YN LI+ L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C    L  A  LL  M   G     ITY T+IDG CK   IE A +V++ M       N 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + +N++I+GLCKD  +D A  L+      GL  + ITYN+++  Y   G I +A  +   
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G  V+ V Y  LIN LCK G  Q A ++++ M + G+ P    Y  ++    +  +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + + L  +M   G  PD  TY  +   L
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 227/489 (46%), Gaps = 24/489 (4%)

Query: 115 LLMGNLMSANSVSPLE-----FLEGLLDSYEI--------------CKATPAVFDALVRA 155
           +LM   MS+  V+P E      ++G ++   I              C AT    + L+  
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
             ++G  E A   IQ+    G       +N F++ L + + +G   K+   MV  G+  +
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T+N+V+  LCK  +LEEA  +  +M+  G  P++  FN +I   C    LE AL L R
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           ++ V     V P+  T N +IN  CK+G    A  +   M  +G   +  TY TLID   
Sbjct: 381 QVTV---KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G   +AL L  +M   G   + + YN+ I  L  +  +E A  V   M  + I  +  
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++ L  GLC++  +  AF L NQ++ E +  +  +YN ++ + CK  ++  A  +L +M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              G   D++TYGTLI+G CK G  + A++V   M+    +P    YN ++  L +  ++
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617

Query: 516 DAAKSLLQASQRIG-LLDAITYNTLINGY-FINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
             A SL +    +G   DA+TY  +  G     G I EAF    EM + G       + +
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 574 LINFLCKFG 582
           L   L   G
Sbjct: 678 LAEGLLNLG 686


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 256/513 (49%), Gaps = 33/513 (6%)

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
           +++   L  KG   S+   N  LS LVK NE+   ++++  M  CG   +V  F+ ++ A
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-------- 277
            C   ++++A+ L+ +M K G+ PNVV +N II+  C+ G L+ A +   KM        
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266

Query: 278 ----GV--------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
               GV                    MS     PN+V +N +I+G+C++G +  A +IR 
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            MI  GI  N  T  +LI GY +    E A  L +EM+  G + N   + S IH L  + 
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             + AL  + +M+ ++  P+    ++L  GLC+NG   +A +L  ++LE+    +  + N
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+ LC++ +   A +LL  M+ RGL+ D I+Y TLI   CK G +E   ++ E M + 
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEA 552
             +P++  YN +++GLC    ++ A  L    ++ G   DA TY  +I+GY    ++ E 
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F EM  + I  N V Y  LI   C+ G  ++A  L   M   GI     TY++L+  
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            S     +   +L D+M   G+SP+   Y A+I
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPNVVCYTALI 659



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 256/531 (48%), Gaps = 33/531 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++    + G  + A+   +K++ +    S+  +   ++ LVKL        + KEM
Sbjct: 234 TYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM 293

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              GY  N   +N +I   C+   +  AL +   M+ +GI PN V  N +I   C+   +
Sbjct: 294 SDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQM 353

Query: 268 EFALKLFRKMGVMSG--------------------DSVL------------PNSVTHNCI 295
           E A  L  +M    G                    DS L            PN      +
Sbjct: 354 EHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLL 413

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++G C+ G+   A E+ Y +++ G   N  T   LI G    GS EEA +L  EM++RGL
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           + +++ YN+ I     EG VE    +  +M+ + I PD +TY++L  GLC  G +++A  
Sbjct: 474 VLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGG 533

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L ++  +     DAY+Y I+I+  CK+N +   ++L   M+   +  + + YGTLI  YC
Sbjct: 534 LWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYC 593

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           + GN+  A ++ ++M+          Y+S+I+GL     +D+A  LL   ++ GL  + +
Sbjct: 594 ENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVV 653

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y  LI GY   G++ +  ++  EM    +  NK+ Y I+IN  CK G  + A +L+  M
Sbjct: 654 CYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEM 713

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              GI+PD VTY  L   F K    EE +++ D M   G+S D+ TY  +I
Sbjct: 714 AQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 251/531 (47%), Gaps = 21/531 (3%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           E  R   SL +   +++ LV   RFD+A  ++   MS    +P                 
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKE-MSDRGYAP----------------N 301

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             V++ L+    +IG    A  +   +   G S +    N+ +    K N++     L +
Sbjct: 302 NVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLE 361

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM++ G V N  TF  VI+ LC +C+ + AL     ML     PN     ++++  CQ G
Sbjct: 362 EMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNG 421

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
               A++L+ ++          N+VT N +I+G C+ G  E A ++   M++ G+  +  
Sbjct: 422 KQSEAIELWYRL---LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSI 478

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           +Y TLI    + G  EE  +L +EMV+RG+ P+   YN  +H L   G +E A  +  + 
Sbjct: 479 SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC 538

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                 PD +TY I+  G C+   V++  KL  +++   +  +A  Y  LI   C++ N+
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L   M  RG+     TY +LI G    G ++ A Q+ + M+K    PN+V Y ++
Sbjct: 599 REAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTAL 658

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I G CK   +    S+LQ      +  + ITY  +ING+   G +  A  + +EM   GI
Sbjct: 659 IGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGI 718

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             + V YN L N  CK G  ++A ++  +M   GI  D +TYTTL+  + K
Sbjct: 719 VPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 235/466 (50%), Gaps = 8/466 (1%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           IH ++    HL      G  ++L+  + + G   ++ T N ++ +L K  +++ +  ++ 
Sbjct: 131 IHVYSTQFKHL----GFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFD 186

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M   G+ P+V  F+ ++N  C  G ++ A++LFRKM  +    V PN VT+N II+G C
Sbjct: 187 IMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKV---GVAPNVVTYNNIIHGLC 243

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K GR++ A + +  M K  +  ++ TY  LI+G  +    +EA  +  EM  RG  PNNV
Sbjct: 244 KNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNV 303

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           VYN+ I      G++  AL +  DMI   I P+  T + L +G C++  ++ A  L  ++
Sbjct: 304 VYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           L    V +  ++  +I+ LC      +A   +  M++R   P+      L+ G C+ G  
Sbjct: 364 LTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQ 423

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
             A++++  + +     N V  N++I+GLC+  S + A  LL+     GL LD+I+YNTL
Sbjct: 424 SEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I      GK+ E F +  EM   GI  +   YN+L++ LC  G  ++A  L      +G 
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            PD  TY  ++  + K    EE  +L  +MV   +  +   Y  +I
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 213/423 (50%), Gaps = 28/423 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +++H L    RFD ALL +              +E LL ++   K    +   LV    Q
Sbjct: 377 SVIHRLCLKCRFDSALLFI--------------MEMLLRNF---KPNDGLLTLLVSGLCQ 419

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G    A ++  +L  KG + +    N  +  L +        KL KEM+  G V +  +
Sbjct: 420 NGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSIS 479

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I A CKE K+EE   L   M++ GI P++  +NM+++  C +G +E A  L+ +  
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC- 538

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
               +   P++ T+  +I+G+CK  RVE  E++   M+   I+ N   Y TLI  Y   G
Sbjct: 539 --KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENG 596

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +  EA RL D+M  RG+   +  Y+S IH L   G V+ A  +L +M  + + P+   Y+
Sbjct: 597 NMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYT 656

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY----SYNILINYLCKSNNLAAAKQLLSS 454
            L  G C+ G + +     + +L+E  + + +    +Y I+IN  CK  N+ AA +LL+ 
Sbjct: 657 ALIGGYCKLGQMHKV----DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNE 712

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  +G++PD +TY  L +G+CK G +E A++V + M       + + Y ++I+G  K  +
Sbjct: 713 MAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHKPLT 772

Query: 515 LDA 517
           + +
Sbjct: 773 VSS 775



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 194/424 (45%), Gaps = 72/424 (16%)

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           + Q   L F + +F    +++   + P+  T N +++   K   V+ + ++   M   G+
Sbjct: 135 STQFKHLGFGV-VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGV 193

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V  ++T+++ +  GG  ++A+ L  +M K G+ PN V                    
Sbjct: 194 TPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVV-------------------- 233

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
                          TY+ +  GLC+NG + +AF+   ++ +E +     +Y +LIN L 
Sbjct: 234 ---------------TYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLV 278

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K      A  +L  M  RG  P+ + Y TLIDGYC+ GNI  A+Q+ ++M      PN V
Sbjct: 279 KLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSV 338

Query: 501 IYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNT--------------------- 538
             NS+I G CK   ++ A+ LL+      G+++  T+ +                     
Sbjct: 339 TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEM 398

Query: 539 --------------LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
                         L++G   NGK +EA  ++  +   G A N V  N LI+ LC+ G  
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           ++A +L+K M+  G++ D ++Y TL+    K    EE  +L ++MV  G+ PD  TYN +
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNML 518

Query: 645 ISPL 648
           +  L
Sbjct: 519 LHGL 522


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 238/459 (51%), Gaps = 9/459 (1%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +   M   G   N  TF+ ++  L  + K+ +A+ L+  M+K G  P+V+ ++ IIN 
Sbjct: 32  FSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIING 91

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++G    A++L +KM         PN V ++ II+  CK   +  A E    M+  GI
Sbjct: 92  LCKMGSTTMAIQLLKKM---EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGI 148

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV TY++++ G+   G S EA  L  +MV+R +MP+ V +N  +  L  EG +  A  
Sbjct: 149 SPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQC 208

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V   MI+K + P+  TY+ L  G C    + +A KL N ++ +       SYNILI   C
Sbjct: 209 VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHC 268

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           KS  +  AK LL+ M  + L PD +TY TL+ G+C+ G  + A ++ E M+     P+L+
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLM 328

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEM 559
            Y+ +++GLCK   LD A  LL+A Q   +   I  Y  LI G    GK+  A  +FS +
Sbjct: 329 TYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNL 388

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              GI  + V Y ++I+ L K G   +A EL + M +HG +P+  TY  ++  F +N   
Sbjct: 389 FVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDT 448

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
                L ++MV  G S D+ T+      +L +  + D++
Sbjct: 449 SNAGRLIEEMVGRGFSADSSTFQ-----MLSDLESRDEI 482



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 221/406 (54%), Gaps = 2/406 (0%)

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           S I P+V    ++IN  C      F    F  +G M    + PN VT + ++NG     +
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFA-FSVLGNMFKLGLQPNHVTFSTLLNGLSSKAK 62

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A ++   M+K G + +V TY+T+I+G  + GS+  A++L  +M ++G  PN VVY++
Sbjct: 63  IIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYST 122

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I  L  +  +  A+  LS+M+++ I P+  TYS +  G C  G   +A  L  Q++E +
Sbjct: 123 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           ++ D  ++NIL++ L K   +  A+ +  +MI +G+ P++ TY  L+DGYC    ++ A 
Sbjct: 183 VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGY 543
           +++  M +    P++  YN +I G CK   +D AK LL + S +    D +TY+TL+ G+
Sbjct: 243 KLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGF 302

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
             +G+  +A  +  EMR+ G+  + + Y+I+++ LCK G   +A EL+K M    I P+ 
Sbjct: 303 CQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNI 362

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             YT L+         E   EL  ++ + G+ PD  TY  +IS LL
Sbjct: 363 FIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 221/437 (50%), Gaps = 23/437 (5%)

Query: 106 NWRRFDDALLLMGNL----MSANSVSPLEFLEGLLDSYEICKATPAVFDALVR------- 154
           N   F  A  ++GN+    +  N V+    L GL    +I  A   +FD +V+       
Sbjct: 24  NHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV-KLFDEMVKMGYEPDV 82

Query: 155 --------ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
                      ++G+T  A  +++K++ KG   ++  ++  +  L K   I    +   E
Sbjct: 83  ITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSE 142

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV+ G   NV T++ +++  C   +  EA SL+ +M++  + P+ V FN++++   + G 
Sbjct: 143 MVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGM 202

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A  +F  M +  G  V PN  T+N +++G+C   +++ A+++   M++ G   +VR+
Sbjct: 203 ILEAQCVFETM-IEKG--VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRS 259

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LI G+ + G  +EA  L  EM  + L P+ V Y++ +     +G  + A  +L +M 
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + PD  TYSI+  GLC+ G + +AF+L   + E  +  + + Y ILI  +C    L 
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLE 379

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           AA++L S++ V+G+ PD++TY  +I G  KGG    A +++ +M      PN   YN II
Sbjct: 380 AARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVII 439

Query: 507 NGLCKDASLDAAKSLLQ 523
            G  ++     A  L++
Sbjct: 440 QGFLRNGDTSNAGRLIE 456



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 178/349 (51%), Gaps = 3/349 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK    V+  ++ +  +      A + + ++  +G S ++  +++ L     L       
Sbjct: 113 CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEAT 172

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+K+MV    + +  TFN+++  L KE  + EA  ++  M++ G+ PNV  +N +++  
Sbjct: 173 SLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGY 232

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    ++ A KLF    +M      P+  ++N +I G CK GR++ A+ +   M    + 
Sbjct: 233 CSQSQMDEAQKLFN---IMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALT 289

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY+TL+ G+ + G  ++A +L +EM   GL+P+ + Y+  +  L  +G ++ A  +
Sbjct: 290 PDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFEL 349

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M +  I P+ F Y+IL +G+C  G ++ A +L + +  + +  D  +Y ++I+ L K
Sbjct: 350 LKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLK 409

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
                 A +L   M V G +P+  TY  +I G+ + G+   A ++ E M
Sbjct: 410 GGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458



 Score = 46.6 bits (109), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%)

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           AF++   M  +G+  N V ++ L+N L        A +L   M+  G  PD +TY+T++ 
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
              K  S    I+L   M   G  P+   Y+ II  L  +K
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDK 131


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 182/635 (28%), Positives = 300/635 (47%), Gaps = 53/635 (8%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSC---AIVHLLVNWRRFDDALLLMGNLMSANSVSP 128
           K P+  + F+ W   +   +   +S     ++V  L++  +F DA  L+ + +  +  S 
Sbjct: 53  KKPETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDAS- 111

Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L     LL         P  A+FD  + A    G    A  + QK+       ++   N 
Sbjct: 112 LSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNT 171

Query: 187 FLSHLVKLNE---IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
            L  LV+      I    +++ +MV  G   NV TFN+++   C E KLE+AL +  RM+
Sbjct: 172 LLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231

Query: 244 ------------------------------------KSGIWPNVVCFNMIINEACQVGDL 267
                                               K+G+ PN V +N ++   C++G L
Sbjct: 232 SEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL 291

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A   F+ + +M   +VLP+  T+N +ING C  G +    E+  AM    +  +V TY
Sbjct: 292 KEA---FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTY 348

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG    G S EA +L ++M   G+  N V +N ++ WL  E   E     + +++D
Sbjct: 349 NTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD 408

Query: 388 KH-ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            H   PD  TY  L K   + G +  A ++  ++ ++ +  +  + N +++ LCK   L 
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL+S   RG I D +TYGTLI G+ +   +E A+++++ MKKV+  P +  +NS+I
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLC     + A          GLL D  T+N++I GY   G++ +AF  ++E       
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +    NIL+N LCK G  ++A      +I    + D VTY T+++ F K+   +E  +L
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDL 647

Query: 626 HDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
             +M   G+ PD  TYN+ IS L+  G+ S  D++
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682



 Score = 40.0 bits (92), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 5/141 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + F++++    + G  E A++   +          +  N  L+ L K     +    +  
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           ++    V+ V T+N +I A CK+ KL+EA  L   M + G+ P+   +N  I+   + G 
Sbjct: 617 LIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675

Query: 267 L----EFALKLFRKMGVMSGD 283
           L    E   K   K G M  D
Sbjct: 676 LSETDELLKKFSGKFGSMKRD 696


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 175/638 (27%), Positives = 307/638 (48%), Gaps = 63/638 (9%)

Query: 67  VSEFRKSPKLALEFYTWVGENNRFSHSLES-SCAIVHL------------LVNWRRFDDA 113
           V  ++  P  AL+ +  V   + F H+LE+  C I  L            L   R+  D+
Sbjct: 13  VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDS 72

Query: 114 LLLMG-------NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAY 166
            +L G       +      V     +   +D Y+ C+ +   ++A++    + G    A+
Sbjct: 73  KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYD-CEPSVQSYNAIMNILVEYGYFSQAH 131

Query: 167 DVIQKLK-------VKGHSVSIHAW-------------NNFLSHLVKLNE------IGRF 200
            V  ++K       V  H++ + ++             NN      + N       I  F
Sbjct: 132 KVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGF 191

Query: 201 WK---------LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           +K         L+ EM+  G   ++ TFN +I+ LCK+  ++E+  L+ +++K G+ PN+
Sbjct: 192 YKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN+ I   C+ G ++ A +L   +     + + P+ +++N +I GFCK  ++  AE  
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESI---VSEGLTPDVISYNTLICGFCKHSKLVEAECY 308

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
            + M+ +G++ N  TY T+I+G+ + G  + A ++  + + +G +P+   Y+S I+ L  
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +GD+  A+ V  + ++K        Y+ L KGL + G V QA +L   ++E     D ++
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YN+++N LCK   L+ A  +L+  I +G IPDI T+ TLIDGYCK  N++ A+++ + M 
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
                P+++ YN+++NGLCK   LD      +A    G   + ITYN LI  +  + K++
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT--YTT 608
           EA  +F EM+  G+  + V    LI  LC  G   +A EL  V I       Y T  +  
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF-VTIEKEYKFSYSTAIFNI 607

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           ++  F    +     +L   M  S  +PDN TY  +I 
Sbjct: 608 MINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 229/429 (53%), Gaps = 4/429 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K++EA++++ RM      P+V  +N I+N   + G    A K++ +M  +    + P+  
Sbjct: 91  KVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG---IYPDVY 147

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           TH   +  FC  GR   A  +   M   G + N  +Y  +I G+ +     EA  L DEM
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +K+G+ P+ + +N  IH L  +G+V+ +  + S ++ + +CP+ FT++I  +GLCR G +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A +L   ++ E +  D  SYN LI   CK + L  A+  L  M+  G+ P+  TY T+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+G+CK G ++ A ++  +       P+   Y+S+INGLC D  ++ A ++   +   G 
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 531 LDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             +I  YNTL+ G    G + +A  +  +M   G + +   YN+++N LCK GC   A  
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++   I  G IPD  T+ TL+  + K  + ++ IE+ D M+  G++PD  TYN +++ L 
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507

Query: 650 GEKSAEDQV 658
             +  ++ V
Sbjct: 508 KARKLDNVV 516



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 255/511 (49%), Gaps = 42/511 (8%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           AY +  ++  +G    I  +N  +  L K   +    KL+ +++  G   N+ TFN+ I 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC++  ++EA  L   ++  G+ P+V+ +N +I   C+   L  A     KM V SG  
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM-VNSG-- 316

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           V PN  T+N IINGFCK G ++ A++I R AM K  I  +  TY++LI+G    G    A
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP-DEFTYSSLINGLCNDGDMNRA 375

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           + +  E +++G   + ++YN+ +  L  +G V  AL ++ DM++    PD +TY+++  G
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+ GC+  A  + N  + +  + D +++N LI+  CK  N+  A ++L +M+  G+ PD
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           +ITY TL++G CK   ++  V  ++ M +    PN++ YN +I   CKD  +  A  L +
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFK 555

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR---------------------- 560
             +  GL  D +T  TLI G   NG++ +A+ +F  +                       
Sbjct: 556 EMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXK 615

Query: 561 -NVGIA---VNKVG----------YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            NV +A    +K+G          Y ++I+  CK G    A   +   I  G++P + T 
Sbjct: 616 LNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTC 675

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
             ++          E + + + MV +G+ P+
Sbjct: 676 GKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 237/495 (47%), Gaps = 42/495 (8%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+    + G  + +  +  K+  +G   ++  +N F+  L +   I    +L + +
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G   +V ++N +I   CK  KL EA    ++M+ SG+ PN   +N IIN  C+ G +
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMM 337

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A K+ R   +  G   +P+  T++ +ING C  G +  A  + Y  ++ G   ++  Y
Sbjct: 338 QNADKILRD-AMFKG--FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL+ G ++ G   +AL+L  +M++ G  P+   YN  ++ L   G +  A  +L+D I 
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   PD FT++ L  G C+   + +A ++ + +L   +  D  +YN L+N LCK+  L  
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
                 +M+ +G  P+IITY  LI+ +CK   +  A+++++ MK     P++V   ++I 
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574

Query: 508 GLCKDASLDAAKSL---LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           GLC +  LD A  L   ++   +     AI +N +IN +     ++ A  +F +M     
Sbjct: 575 GLCSNGELDKAYELFVTIEKEYKFSYSTAI-FNIMINAFCXKLNVSMAEKLFHKMGGSDC 633

Query: 565 AVNKVGYNILINFLCKFG-------------------------------C----YQQARE 589
           A +   Y ++I+  CK G                               C      +A  
Sbjct: 634 APDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVV 693

Query: 590 LMKVMILHGIIPDYV 604
           ++ +M+ +GI+P+ V
Sbjct: 694 IINLMVQNGIVPEEV 708



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 192/417 (46%), Gaps = 41/417 (9%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV--RTY 327
           ALK+F +  V + D       T+ C+I      G+ E  E++  A ++  +D  +    Y
Sbjct: 23  ALKMFNQ--VKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDV-LAEMRKNVDSKMLEGVY 79

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++  Y R G  +EA+ + + M      P+   YN+ ++ L   G    A  V   M D
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I PD +T++I  K  C  G    A +L N +  +    +A SY  +I+   K N    
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   M+ +G+ PDI+T+  LI   CK GN++ + +++  + K    PNL  +N  I 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC+  ++D A  LL++    GL  D I+YNTLI G+  + K+ EA     +M N G+  
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT------------------- 607
           N+  YN +IN  CK G  Q A ++++  +  G IPD  TY+                   
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 608 ----------------TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                           TLV   SK     + ++L  DM+  G SPD  TYN +++ L
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 129/285 (45%), Gaps = 13/285 (4%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           + L  MG L  AN +      +G       C      F+ L+    +    + A +++  
Sbjct: 434 NGLCKMGCLSDANGILNDAIAKG-------CIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G +  +  +N  L+ L K  ++      +K M+  G   N+ T+N++I + CK+ K
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + EA+ L+  M   G+ P++V    +I   C  G+L+ A +LF  + +        ++  
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF--VTIEKEYKFSYSTAI 604

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSSEEALRLCDE 349
            N +IN FC    V  AE++ + M   G DC  +  TY  +ID Y + G+ + A     E
Sbjct: 605 FNIMINAFCXKLNVSMAEKLFHKM--GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLE 662

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + +GL+P+       ++ L     +  A+ +++ M+   I P+ 
Sbjct: 663 NISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEE 707


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 241/437 (55%), Gaps = 2/437 (0%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           + ++++ NL++ +L    +  +  + +  ++ +G  P+   +N  +      GDL+ AL 
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           + R+MG   G +  P++ ++N +I G  + G+   A ++   M+  G+  N  TY T+ID
Sbjct: 180 MLRRMGRSEG-APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMID 238

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ +GG  E   RL D+M++ G  PN V YN  +  L   G ++    ++ +M    + P
Sbjct: 239 GHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLP 298

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D FTYSIL  GL R G  +    L  + L++ ++  AY+ +IL+N LCK   +A A+Q+L
Sbjct: 299 DGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL 358

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  GL+P    Y TLI+GYC+  +++GA  ++E MK    +P+ + YN++INGLCK 
Sbjct: 359 EMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKM 418

Query: 513 ASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  A+ L+   ++ G+  ++ T+NTLI+ Y   G++ + F + S+M++ GI  N + +
Sbjct: 419 EMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISF 478

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             ++   CK G   +A  ++  MI   ++P+   Y +++  + ++   E+   L + M  
Sbjct: 479 GSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKS 538

Query: 632 SGVSPDNQTYNAIISPL 648
           SGVS    TYN ++  L
Sbjct: 539 SGVSASIFTYNLLLKGL 555



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 258/532 (48%), Gaps = 11/532 (2%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKL 172
           LL+ +L+S    + +    GLL +     A P  F  +  V+AC   G  + A  +++++
Sbjct: 128 LLLESLLSVGRHADVRAAFGLLVA---AGARPDTFAWNKAVQACVAAGDLDEALAMLRRM 184

Query: 173 KVKGHSVSIHA--WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
                +    A  +N  ++ L +  +     K++ EMV  G   N  T+N +I    K  
Sbjct: 185 GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGG 244

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
            LE    L  +ML+ G  PNVV +N++++  C+ G ++    L   M  M+  S+LP+  
Sbjct: 245 DLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRAL---MDEMTSYSMLPDGF 301

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T++ + +G  + G       +    +K G+     T + L++G  + G   +A ++ + +
Sbjct: 302 TYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEML 361

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V  GL+P   +YN+ I+      D++GA  +   M  +HI PDH TY+ L  GLC+   +
Sbjct: 362 VHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMI 421

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  L  ++ +  +     ++N LI+   ++  L     +LS M  +G+  ++I++G++
Sbjct: 422 TEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSV 481

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +  +CK G I  AV + ++M   +  PN  +YNSII+   +    + A  L++  +  G+
Sbjct: 482 VKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGV 541

Query: 531 LDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             +I TYN L+ G   N +I EA  +   + N G+  + V YN +I+  C  G   +A E
Sbjct: 542 SASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALE 601

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           L++ M  + I P   TY  L++         ++  L+  MV   V P +  Y
Sbjct: 602 LLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 165/360 (45%), Gaps = 38/360 (10%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +  +      L+ E +  G +    T ++++  LCK+ K+ +A  +   ++ +G+ P 
Sbjct: 310 LTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 369

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
              +N +IN  CQV DL+ A  +F +M       + P+ +T+N +ING CK+  +  AE+
Sbjct: 370 TAIYNTLINGYCQVRDLQGAFSIFEQM---KSRHIRPDHITYNALINGLCKMEMITEAED 426

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSE----------------------------- 341
           +   M K+G+D +V T+ TLID Y R G  E                             
Sbjct: 427 LVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFC 486

Query: 342 ------EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
                 EA+ + D+M+ + ++PN  VYNS I      G  E A  ++  M    +    F
Sbjct: 487 KNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIF 546

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY++L KGLC+N  + +A +L   +  + +  D  SYN +I+  C   +   A +LL  M
Sbjct: 547 TYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM 606

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
               + P + TY  L+      G +     +Y++M     +P+  IY +      K ASL
Sbjct: 607 HKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASL 666


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 271/549 (49%), Gaps = 41/549 (7%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS---IHA------------------- 183
           P V++ ++R    +GA +    ++ +++ +GH V    +H+                   
Sbjct: 74  PEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLIL 133

Query: 184 ---------------WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
                          +N+ L+ LV+ +++     +Y EM + G   +V TFN ++ ALC+
Sbjct: 134 NQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR 193

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             ++  A+ +   M   G+ P+   F  ++    + G +E AL++  +M  M   +    
Sbjct: 194 AHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT--- 250

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            VT N +ING+CKLGRVE A       I  G + +  TY T ++G  +      AL++ D
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            MV+ G  P+   YN  ++ L   G +E A  +L+ M+D+   PD  T++ L   LC   
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            +++A  L  QV  + +  D Y++NILIN LCK  +   A +L   M   G  PD +TY 
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLID  C  G +  A+ + ++M+      + + YN+II+GLCK   ++ A+ +       
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  +AIT+NTLI+G   + KI +AF + ++M + G+  N + YN ++   CK G  ++A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            ++++ M  +G   D VTY TL+    K    +  +++   M + G+ P  + YN ++  
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610

Query: 648 LLGEKSAED 656
           L    +  D
Sbjct: 611 LFRRNNIRD 619



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 267/570 (46%), Gaps = 25/570 (4%)

Query: 84  VGENNRFSHSLESSCAIVHLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           V E  R  H ++    +VH  ++     + FDDA+ L+      N + PL  ++      
Sbjct: 97  VAEMRREGHQVK--LGVVHSFLDSYEGQQLFDDAVDLI-----LNQLQPLFGIQ------ 143

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
               A   V++ L+    +    +    V  ++  +G    +  +N  +  L + +++  
Sbjct: 144 ----ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              + +EM S G   +  TF  ++    +E  +E AL +  RML+ G     V  N++IN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C++G +E AL   ++      D   P+ +T+N  +NG C+   V  A ++   M++ G
Sbjct: 260 GYCKLGRVEDALGYIQQE---IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            D +V TY  +++   + G  EEA  + ++MV RG +P+   +N+ I  L     +E AL
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   +  K + PD +T++IL   LC+ G    A +L  ++       D  +YN LI+ L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C    L  A  LL  M   G     ITY T+IDG CK   IE A +V++ M       N 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + +N++I+GLCKD  +D A  L+      GL  + ITYN+++  Y   G I +A  +   
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G  V+ V Y  LIN LCK G  Q A ++++ M + G+ P    Y  ++    +  +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + + L  +M   G  PD  TY  +   L
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 228/489 (46%), Gaps = 24/489 (4%)

Query: 115 LLMGNLMSANSVSPLE-----FLEGLLDSYEI--------------CKATPAVFDALVRA 155
           +LM   MS+  V+P E      ++G ++   I              C AT    + L+  
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
             ++G  E A   IQ+    G       +N F++ L + + +G   K+   MV  G+  +
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T+N+V+  LCK  +LEEA  +  +M+  G  P++  FN +I   C    LE AL L R
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           ++ V     V P+  T N +IN  CK+G    A  +   M  +G   +  TY TLID   
Sbjct: 381 QVTV---KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 437

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G   +AL L  +M   G   + + YN+ I  L  +  +E A  V   M  + I  +  
Sbjct: 438 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 497

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++ L  GLC++  +  AF+L NQ++ E +  +  +YN ++ + CK  ++  A  +L +M
Sbjct: 498 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 557

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              G   D++TYGTLI+G CK G  + A++V   M+    +P    YN ++  L +  ++
Sbjct: 558 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 617

Query: 516 DAAKSLLQASQRIG-LLDAITYNTLINGYFI-NGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
             A SL +    +G   DA+TY  +  G     G I EAF    EM + G       + +
Sbjct: 618 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 677

Query: 574 LINFLCKFG 582
           L   L   G
Sbjct: 678 LAEGLLNLG 686


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 271/549 (49%), Gaps = 41/549 (7%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS---IHA------------------- 183
           P V++ ++R    +GA +    ++ +++ +GH V    +H+                   
Sbjct: 74  PEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLIL 133

Query: 184 ---------------WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
                          +N+ L+ LV+ +++     +Y EM + G   +V TFN ++ ALC+
Sbjct: 134 NQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCR 193

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             ++  A+ +   M   G+ P+   F  ++    + G +E AL++  +M  M   +    
Sbjct: 194 AHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT--- 250

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            VT N +ING+CKLGRVE A       I  G + +  TY T ++G  +      AL++ D
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            MV+ G  P+   YN  ++ L   G +E A  +L+ M+D+   PD  T++ L   LC   
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            +++A  L  QV  + +  D Y++NILIN LCK  +   A +L   M   G  PD +TY 
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLID  C  G +  A+ + ++M+      + + YN+II+GLCK   ++ A+ +       
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  +AIT+NTLI+G   + KI +AF + ++M + G+  N + YN ++   CK G  ++A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            ++++ M  +G   D VTY TL+    K    +  +++   M + G+ P  + YN ++  
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQS 610

Query: 648 LLGEKSAED 656
           L    +  D
Sbjct: 611 LFRRNNIRD 619



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 267/570 (46%), Gaps = 25/570 (4%)

Query: 84  VGENNRFSHSLESSCAIVHLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           V E  R  H ++    +VH  ++     + FDDA+ L+      N + PL  ++      
Sbjct: 97  VAEMRREGHQVK--LGVVHSFLDSYEGQQLFDDAVDLI-----LNQLQPLFGIQ------ 143

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
               A   V++ L+    +    +    V  ++  +G    +  +N  +  L + +++  
Sbjct: 144 ----ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              + +EM S G   +  TF  ++    +E  +E AL +  RML+ G     V  N++IN
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C++G +E AL   ++      D   P+ +T+N  +NG C+   V  A ++   M++ G
Sbjct: 260 GYCKLGRVEDALGYIQQE---IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 316

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            D +V TY  +++   + G  EEA  + ++MV RG +P+   +N+ I  L     +E AL
Sbjct: 317 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 376

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   +  K + PD +T++IL   LC+ G    A +L  ++       D  +YN LI+ L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C    L  A  LL  M   G     ITY T+IDG CK   IE A +V++ M       N 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + +N++I+GLCKD  +D A  L+      GL  + ITYN+++  Y   G I +A  +   
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G  V+ V Y  LIN LCK G  Q A ++++ M + G+ P    Y  ++    +  +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 616

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + + L  +M   G  PD  TY  +   L
Sbjct: 617 IRDALSLFREMAEVGEPPDALTYKIVFRGL 646



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 212/443 (47%), Gaps = 5/443 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C AT    + L+    ++G  E A   IQ+    G       +N F++ L + + +G   
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K+   MV  G+  +V T+N+V+  LCK  +LEEA  +  +M+  G  P++  FN +I   
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    LE AL L R++ V     V P+  T N +IN  CK+G    A  +   M  +G  
Sbjct: 367 CTGNRLEEALDLARQVTV---KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCT 423

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY TLID     G   +AL L  +M   G   + + YN+ I  L  +  +E A  V
Sbjct: 424 PDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 483

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M  + I  +  T++ L  GLC++  +  AF+L NQ++ E +  +  +YN ++ + CK
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             ++  A  +L +M   G   D++TYGTLI+G CK G  + A++V   M+    +P    
Sbjct: 544 QGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKA 603

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFI-NGKIAEAFAMFSEM 559
           YN ++  L +  ++  A SL +    +G   DA+TY  +  G     G I EAF    EM
Sbjct: 604 YNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEM 663

Query: 560 RNVGIAVNKVGYNILINFLCKFG 582
            + G       + +L   L   G
Sbjct: 664 VDKGFIPEFSSFRMLAEGLLNLG 686


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 255/508 (50%), Gaps = 10/508 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G T  A  V++  +  G  V + A+N  ++   +   +    +L   M    
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---P 138

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  LC   ++ +ALSL   ML+ G  PNVV + +++   C+    E A+
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            +  +M         PN VT+N IING C+ GRV+ A E+   +   G   +  +Y TL+
Sbjct: 199 AVLDEM---RAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLL 255

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G       ++   L  EM+++  MPN V ++  I +    G VE A+ VL  M + H C
Sbjct: 256 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTE-HGC 314

Query: 392 PDHFTY-SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             + T  +I+   +C+ G V  AFKL N +       D  SY  ++  LC++     AK+
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL+ M+     P+ +T+ T I   C+ G IE A+ + E M +      +V YN+++NG C
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               +D+A  L ++       + ITY TL+ G     ++  A  + +EM       N V 
Sbjct: 435 VQGHIDSALELFRSMP--CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVT 492

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N+L++F C+ G  ++A EL++ M+ HG  P+ +TY TL+   +K+CS E+ +EL   +V
Sbjct: 493 FNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLV 552

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             GVSPD  T+++II  L  E   E+ V
Sbjct: 553 SKGVSPDVITFSSIIGILSKEDRIEEAV 580



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 245/512 (47%), Gaps = 24/512 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++ +L +  R  DAL L+ +++                    C+     +  L+ A  + 
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRG-----------------CQPNVVTYTVLLEAMCRN 191

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
              E A  V+ +++ KG + +I  +N  ++ + +   +    +L   + S G+  +  ++
Sbjct: 192 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSY 251

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             ++  LC   + ++   L+  M++    PN V F+M+I   C+ G +E A+++  +   
Sbjct: 252 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQ--- 308

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M+      N+   N +IN  CK GRV+ A ++   M   G + +  +Y T++ G  R   
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            ++A  L +EMV+    PN V +N+ I  L  +G +E A+ ++  M +        TY+ 
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C  G +  A +L   +       +  +Y  L+  LC +  L  A +L++ M+   
Sbjct: 429 LVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P+++T+  L+  +C+ G +E A+++ E M +    PNL+ YN++++G+ KD S + A 
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDAL 545

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL      G+  D IT++++I       +I EA  +F  ++++G+    V YN ++  L
Sbjct: 546 ELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           CK      A +    M+ +G +P+  TY  L+
Sbjct: 606 CKRCEIDNAIDFFAYMVSNGCMPNESTYIILI 637



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 184/416 (44%), Gaps = 38/416 (9%)

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL  A++L  + G   G++  P+      +I   C+ GR   A  +  A   +G   +V 
Sbjct: 55  DLAGAVRLVERSGSCDGEA--PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVF 112

Query: 326 TYATLIDGYARGGSSE--------------------------------EALRLCDEMVKR 353
            Y TL+ GY R G  +                                +AL L D+M++R
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR 172

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G  PN V Y   +  +      E A+ VL +M  K   P+  TY+++  G+CR G V  A
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L N++       D  SY  L+  LC S      ++L + M+ +  +P+ +T+  LI  
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           +C+GG +E A+QV E M +     N  + N +IN +CK   +D A  LL      G   D
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            I+Y T++ G     +  +A  + +EM       N+V +N  I  LC+ G  +QA  L++
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIE 412

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            M  HG     VTY  LV  F      +  +EL   M      P+  TY  +++ L
Sbjct: 413 QMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGL 465



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 204/451 (45%), Gaps = 24/451 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLL------DSYEI-------- 141
           I++ +    R DDA  L+  L S     ++VS    L+GL       D  E+        
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      FD L+R   + G  E A  V++++   G + +    N  ++ + K   +   +
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL  +M S G   +  ++  V+  LC+  + ++A  L   M+++   PN V FN  I   
Sbjct: 339 KLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICIL 398

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G +E A+ L  +M   S        VT+N ++NGFC  G ++ A E+  +M      
Sbjct: 399 CQKGLIEQAIMLIEQM---SEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCK 452

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TL+ G       + A  L  EM++    PN V +N  + +   +G +E A+ +
Sbjct: 453 PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIEL 512

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M++    P+  TY+ L  G+ ++   + A +L + ++ + +  D  +++ +I  L K
Sbjct: 513 VEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSK 572

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            + +  A QL   +   G+ P  + Y  ++ G CK   I+ A+  +  M      PN   
Sbjct: 573 EDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNEST 632

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           Y  +I GL  +  L  A+ LL      G+L+
Sbjct: 633 YIILIEGLAHEGLLKEAQDLLSVLCSRGVLN 663



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 3/222 (1%)

Query: 436 INYLCKSNNLAAAKQLLS-SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +  L    +LA A +L+  S    G  PD+     LI   C+ G    A +V    +   
Sbjct: 47  LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
              ++  YN+++ G C+   LDAA+ L+  S  +   DA TY  LI      G++A+A +
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLI-GSMPVA-PDAYTYTPLIRVLCDRGRVADALS 164

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  +M   G   N V Y +L+  +C+   ++QA  ++  M   G  P+ VTY  ++    
Sbjct: 165 LLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMC 224

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +    ++  EL + +   G  PD  +Y  ++  L   K  +D
Sbjct: 225 REGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDD 266


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 254/508 (50%), Gaps = 10/508 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G T  A  V++  +  G +V + A+N  ++   +  ++    +L   M    
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---P 171

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  LC   ++ EALSL   ML  G  P+VV + +++   C+      A+
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++  +M         PN VT+N IING C+ GRV+ A E    +   G   +  +Y T++
Sbjct: 232 EVLDEM---RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 288

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G       E+   L  EM+++  MPN V ++  + +    G VE A+ VL  M   H C
Sbjct: 289 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SGHGC 347

Query: 392 PDHFTY-SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             + T  +I+   +C+ G V  AF+  N +       D  SY  ++  LC++     AK+
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 407

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL  M+ +   P+ +T+ T I   C+ G IE A  + E M +   + N+V YN+++NG C
Sbjct: 408 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 467

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               +D+A  L  +       + ITY TL+ G     ++  A  + +EM     A N V 
Sbjct: 468 VQGRVDSALELFYSMP--CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 525

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N+L++F C+ G   +A EL++ M+ HG  P+ +TY TL+   +K+C+ EE +EL   +V
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 585

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +GVSPD  TY++II  L  E   E+ +
Sbjct: 586 SNGVSPDIVTYSSIIGVLSREDRVEEAI 613



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 248/498 (49%), Gaps = 10/498 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ LV    + G  + A  +I  + V   +   + +   +  L     +G    L  +M+
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMPVAPDA---YTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +V T+ +++ A+CK     +A+ +   M   G  PN+V +N+IIN  C+ G ++
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +   ++   S     P++V++  ++ G C   R E  EE+   M++     N  T+ 
Sbjct: 264 DAREFLNRL---SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 320

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+  + RGG  E A+++ ++M   G   N  + N  I+ +  +G V+ A   L++M   
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  +Y+ + KGLCR    + A +L  +++ ++   +  ++N  I  LC+   +  A
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 440

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L+  M   G   +I+TY  L++G+C  G ++ A++++ +M     KPN + Y +++ G
Sbjct: 441 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTG 497

Query: 509 LCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC    LDAA  LL +  Q+    + +T+N L++ +   G + EA  +  +M   G   N
Sbjct: 498 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 557

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + YN L++ + K    ++A EL+  ++ +G+ PD VTY++++   S+    EE I++  
Sbjct: 558 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 617

Query: 628 DMVLSGVSPDNQTYNAII 645
            +   G+ P    YN I+
Sbjct: 618 IVQDLGMRPKAVIYNKIL 635



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 251/508 (49%), Gaps = 11/508 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L  L+ +L  +  C+ +   +  L+ A  +      A +V+ +++ KG + +I  +N  +
Sbjct: 196 LSLLDDML--HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 253

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           + + +   +    +    + S G+  +  ++  V+  LC   + E+   L+  M++    
Sbjct: 254 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 313

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN V F+M++   C+ G +E A+++  +   MSG     N+   N +IN  CK GRV+ A
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVLEQ---MSGHGCAANTTLCNIVINTICKQGRVDDA 370

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M   G   +  +Y T++ G  R    E+A  L  EMV++   PN V +N+ I  
Sbjct: 371 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 430

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
           L  +G +E A  ++  M  +H C  +  TY+ L  G C  G V  A +L   +       
Sbjct: 431 LCQKGLIEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKP 486

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +Y  L+  LC +  L AA +LL+ M+ +   P+++T+  L+  +C+ G ++ A+++ 
Sbjct: 487 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 546

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           E M +    PNL+ YN++++G+ KD + + A  LL      G+  D +TY+++I      
Sbjct: 547 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 606

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            ++ EA  MF  ++++G+    V YN ++  LCK      A +    M+ +G +P+ +TY
Sbjct: 607 DRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 666

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            TL+   +     +E  +L  ++   GV
Sbjct: 667 ITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 216/482 (44%), Gaps = 42/482 (8%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +LD       TP +  ++ ++    + G  + A + + +L   G      ++   L  L 
Sbjct: 233 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 292

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                    +L+ EM+    + N  TF++++   C+   +E A+ +  +M   G   N  
Sbjct: 293 AAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT 352

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             N++IN  C+ G ++ A +    MG        P+++++  ++ G C+  R E A+E+ 
Sbjct: 353 LCNIVINTICKQGRVDDAFQFLNNMGSYGCS---PDTISYTTVLKGLCRAERWEDAKELL 409

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M++     N  T+ T I    + G  E+A  L ++M + G   N V YN+ ++    +
Sbjct: 410 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 469

Query: 373 GDVEGALFV--------------------------------LSDMIDKHICPDHFTYSIL 400
           G V+ AL +                                L++M+ K   P+  T+++L
Sbjct: 470 GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 529

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               C+ G + +A +L  Q++E     +  +YN L++ + K  N   A +LL  ++  G+
Sbjct: 530 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGV 589

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PDI+TY ++I    +   +E A++++  ++ +  +P  VIYN I+  LCK  + D A  
Sbjct: 590 SPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAID 649

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                   G + + +TY TLI G      + E   +  E+ + G+ +NK   N+L  +  
Sbjct: 650 FFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV-LNK---NLLEEWRP 705

Query: 580 KF 581
           KF
Sbjct: 706 KF 707



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 205/451 (45%), Gaps = 24/451 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLL------DSYEI-------- 141
           I++ +    R DDA   +  L S     ++VS    L+GL       D  E+        
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      FD LVR   + G  E A  V++++   G + +    N  ++ + K   +   +
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 371

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +    M S G   +  ++  V+  LC+  + E+A  L   M++    PN V FN  I   
Sbjct: 372 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 431

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G +E A  L  +   MS      N VT+N ++NGFC  GRV+ A E+ Y+M      
Sbjct: 432 CQKGLIEQATMLIEQ---MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCK 485

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TL+ G       + A  L  EM+++   PN V +N  + +   +G ++ A+ +
Sbjct: 486 PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 545

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M++    P+  TY+ L  G+ ++   ++A +L + ++   +  D  +Y+ +I  L +
Sbjct: 546 VEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSR 605

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            + +  A ++   +   G+ P  + Y  ++   CK  N +GA+  +  M      PN + 
Sbjct: 606 EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELT 665

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           Y ++I GL  +  L   + LL+     G+L+
Sbjct: 666 YITLIEGLANEDFLKETRDLLRELCSRGVLN 696



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 145/319 (45%), Gaps = 4/319 (1%)

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +S  A RL D    RG  P+  +    I  L   G    A  VL          D F Y+
Sbjct: 89  TSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 148

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G CR G +  A +L   +    +  DAY+Y  +I  LC    +  A  LL  M+ R
Sbjct: 149 TLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P ++TY  L++  CK      A++V + M+     PN+V YN IING+C++  +D A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           +  L      G   D ++Y T++ G     +  +   +F+EM       N+V +++L+ F
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+ G  ++A ++++ M  HG   +      ++    K    ++  +  ++M   G SPD
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385

Query: 638 NQTYNAIISPLLGEKSAED 656
             +Y  ++  L   +  ED
Sbjct: 386 TISYTTVLKGLCRAERWED 404


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 167/597 (27%), Positives = 288/597 (48%), Gaps = 25/597 (4%)

Query: 65  RVVSEFRKS--PKLALEFY-TWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
           R+V+  R+   P+ AL    + +  ++  + S +    I+  L     FD   +L+G + 
Sbjct: 58  RLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMR 117

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ-KLKVKGHSVS 180
                  L  ++  + SY    A   +FD              A+D++  +L + G   +
Sbjct: 118 REGHEVGLGLVQSFIGSY----ARLQLFD-------------DAFDLVSNQLDMFGVQAN 160

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
              +N+ L+ L + ++I      Y EM S G   +V TFN VI ALC+  +   A+ +  
Sbjct: 161 TEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLE 220

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M    + P+   F  ++    + G +E AL+L  +M  M      P SVT N +ING+C
Sbjct: 221 EMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG---CSPTSVTVNVLINGYC 277

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           KLGRV  A       I  G + +  T++T ++G  + G  + AL++   M++ G  P+  
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            Y++ I+ L   G++E A  +++ M+D    PD  T++ L   LC    +++A  L  ++
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
             + +  + Y++NILIN LCK  +   A +L   M   G  PD +TY  LID  C  G +
Sbjct: 398 TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
             A+ + + M+      + V YN+II+GLCK   ++ A+ +       G+  +AIT+NTL
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G     +I +A  +  +M + G+  N V YN ++   CK G   +A ++++ M  +G 
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             D VTY TL+    K    +  ++L   M + G+ P  + YN +I  L    +  D
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRD 634



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 237/481 (49%), Gaps = 9/481 (1%)

Query: 135 LLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +L+    C   P    F  L+    + G+ E A  +  ++   G S +    N  ++   
Sbjct: 218 MLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYC 277

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           KL  +G      ++ ++ G+  +  TF+  +  LC+   ++ AL +   ML+ G  P+V 
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            ++ +IN  C  G+LE A  +  +M V SG   LP++ T N +I   C   ++E A ++ 
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQM-VDSG--CLPDTTTFNTLIVALCTENQLEEALDLA 394

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             +   G+  NV T+  LI+   + G    A+RL +EM   G  P+ V YN  I  L + 
Sbjct: 395 RELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454

Query: 373 GDVEGALFVLSDMIDKHICPDH-FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           G +  AL +L +M +   CP    TY+ +  GLC+   +++A ++ +Q+    +  +A +
Sbjct: 455 GKLAKALDLLKEM-EVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAIT 513

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +N LI+ LC +  +  A +L+  MI  GL P+ +TY +++  YCK GNI  A  + + M 
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT 573

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIA 550
               + ++V Y ++INGLCK     AA  LL+  +  G+      YN +I   F      
Sbjct: 574 ANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGR 633

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCK-FGCYQQARELMKVMILHGIIPDYVTYTTL 609
           +A ++F EM  VG   +   Y I+   LC+  G  ++A + +  M  +G IP++ ++  L
Sbjct: 634 DALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRML 693

Query: 610 V 610
            
Sbjct: 694 A 694


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 253/508 (49%), Gaps = 10/508 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G T  A  V++  +  G  V + A+N  ++   +   +    +L   M    
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---P 137

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  LC   ++ +ALSL   ML+ G  PNVV + +++   C+    E A+
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            +  +M         PN VT+N IING C+ GRV+ A ++   +   G   +  +Y TL+
Sbjct: 198 AVLDEM---RAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLL 254

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G       ++   L  EM+++  MPN V ++  I +    G VE A+ VL  M + H C
Sbjct: 255 KGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTE-HEC 313

Query: 392 PDHFTY-SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             + T  +I+   +C+ G V  AFK  N +       D  SY  ++  LC++     AK+
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL  M+     P+ +T+ T I   C+ G IE A+ + E M++      +V YN+++NG C
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC 433

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               +D+A  L ++       + ITY TL+ G     ++  A  + +EM +     N V 
Sbjct: 434 VQGHIDSALELFRSMP--CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVT 491

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N+L+NF C+ G   +A EL++ M+ HG  P+ +TY TL    +K+CS E+ +EL   +V
Sbjct: 492 FNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLV 551

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             GVSPD  T+++II  L  E   E+ +
Sbjct: 552 SKGVSPDVITFSSIIGILSKEDRVEEAI 579



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/540 (24%), Positives = 253/540 (46%), Gaps = 24/540 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++ +L +  R  DAL L+ +++                    C+     +  L+ A  + 
Sbjct: 148 LIRVLCDRGRVADALSLLDDMLRRG-----------------CQPNVVTYTVLLEAMCKN 190

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
              E A  V+ +++ KG + +I  +N  ++ + +   +     L   + S G   +  ++
Sbjct: 191 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSY 250

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             ++  LC   + ++   L+  M++    PN V F+M+I   C+ G +E A+++ ++   
Sbjct: 251 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQ--- 307

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M+      N+   N +IN  CK GRV+ A +    M   G + +  +Y T++ G  R   
Sbjct: 308 MTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAER 367

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A  L  EMV+    PN V +N+ I  L  +G +E A+ ++  M +        TY+ 
Sbjct: 368 WNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNA 427

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C  G +  A +L   +       +  +Y  L+  LC +  L AA +L++ M+ R 
Sbjct: 428 LVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRD 484

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P+++T+  L++ +C+ G ++ A+++ E M +    PNL+ YN++ +G+ KD S + A 
Sbjct: 485 CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDAL 544

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL      G+  D IT++++I       ++ EA  MF   +++G+    + YN ++  L
Sbjct: 545 ELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGL 604

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK      A + +  M+ +G +P+  TY  L+   ++    +E  +L   +   GV   N
Sbjct: 605 CKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKN 664



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 172/401 (42%), Gaps = 36/401 (8%)

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR---- 336
           S D   P+      +I   C+ GR   A  +  A   +G   +V  Y TL+ GY R    
Sbjct: 67  SRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHL 126

Query: 337 ----------------------------GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
                                        G   +AL L D+M++RG  PN V Y   +  
Sbjct: 127 DAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           +      E A+ VL +M  K   P+  TY+++  G+CR G V  A  L N++       D
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY  L+  LC S      ++L + M+ +  +P+ +T+  LI  +C+GG +E A+QV +
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            M + E   N  + N +IN +CK   +D A   L      G   D I+Y T++ G     
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +  +A  +  EM       N+V +N  I  LC+ G  +QA  L++ M  HG     VTY 
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            LV  F      +  +EL   M      P+  TY  +++ L
Sbjct: 427 ALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGL 464



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 3/222 (1%)

Query: 436 INYLCKSNNLAAAKQLLSSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +  L    +LA A +L+     R G  PD+     LI   C+ G    A +V    +   
Sbjct: 46  LRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 105

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
              ++  YN+++ G C+   LDAA+ L+  S  +   DA TY  LI      G++A+A +
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRLI-GSMPVA-PDAYTYTPLIRVLCDRGRVADALS 163

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  +M   G   N V Y +L+  +CK   ++QA  ++  M   G  P+ VTY  ++    
Sbjct: 164 LLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMC 223

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +    ++  +L + +   G  PD  +Y  ++  L   K  +D
Sbjct: 224 REGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDD 265



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 3/220 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  L+         + A +++ ++  +    ++  +N  ++   +   +    
Sbjct: 450 CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAI 509

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L ++M+  G   N+ T+N +   + K+C  E+AL L + ++  G+ P+V+ F+ II   
Sbjct: 510 ELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL 569

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            +   +E A+++F    +     + P ++ +N I+ G CK   ++ A +    M+  G  
Sbjct: 570 SKEDRVEEAIQMFH---LAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCM 626

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            N  TY  LI+G AR G  +EA  L   +  RG++  N++
Sbjct: 627 PNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLI 666


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 246/474 (51%), Gaps = 4/474 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N+ L+ LV+ +++     +Y EM   G   +V TFN ++ ALC+  ++  A+ +   M 
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 212

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
            SG+ P+   F  ++    + G ++ AL++  +M  M      P  VT N +ING+CKLG
Sbjct: 213 SSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCS---PTKVTVNVLINGYCKLG 269

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           RVE A       I  G + +  TY T ++G  + G    AL++ D MV+ G  P+   YN
Sbjct: 270 RVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYN 329

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             ++ L   G +E A  +L+ M+++   PD  T++ L   LC    +++A  L  QV  +
Sbjct: 330 IVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLK 389

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D Y++NILIN LCK  +   A +L   M   G  PD +TY TLID  C  G +  A
Sbjct: 390 GLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKA 449

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
           + + + M+      + V YN+II+GLCK   ++ A+ +       G+  +AIT+NTLI+G
Sbjct: 450 LDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 509

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              + +I +A  + S+M + G+  N + YN ++   CK G  ++A ++++ M  +G   D
Sbjct: 510 LCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVD 569

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            VTY TL+    K    +  ++L   M + G+    + YN +I  L    +  D
Sbjct: 570 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRD 623



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 253/524 (48%), Gaps = 4/524 (0%)

Query: 126 VSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           V  ++ +   LD     +A   V++ L+    +    +    V  ++  +G    +  +N
Sbjct: 130 VDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFN 189

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             +  L + +++     + +EM S G   +  TF  ++    +E  ++ AL +  RML+ 
Sbjct: 190 TLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM 249

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P  V  N++IN  C++G +E AL   ++      +   P+ +T+N  +NG C+ G V
Sbjct: 250 GCSPTKVTVNVLINGYCKLGRVEDALGYIQQE---IANGFEPDQITYNTFVNGLCQNGHV 306

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A ++   M++ G D +V TY  +++   + G  EEA  + ++MV+RG +P+   +N+ 
Sbjct: 307 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL 366

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L +   +E AL +   +  K + PD +T++IL   LC+ G  + A +L  ++     
Sbjct: 367 IVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGC 426

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +YN LI+ LC    L  A  LL  M   G     +TY T+IDG CK   IE A +
Sbjct: 427 TPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEE 486

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYF 544
           V++ M       N + +N++I+GLCKD  +D A  L+      GL  + ITYN+++  Y 
Sbjct: 487 VFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYC 546

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G I +A  +   M   G  V+ V Y  LIN LCK G  Q A +L++ M + G+     
Sbjct: 547 KQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPK 606

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            Y  ++    +  +  + + L  +M   G  PD  TY  +   L
Sbjct: 607 AYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGL 650



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 226/489 (46%), Gaps = 24/489 (4%)

Query: 115 LLMGNLMSANSVSPLE-----FLEGLLDSYEI--------------CKATPAVFDALVRA 155
           +LM   MS++ V+P E      ++G ++   I              C  T    + L+  
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
             ++G  E A   IQ+    G       +N F++ L +   +G   K+   MV  G+  +
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T+N+V+  LCK  +LEEA  +  +M++ G  P++  FN +I   C    LE AL L R
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           ++  + G S  P+  T N +IN  CK+G  + A  +   M  +G   +  TY TLID   
Sbjct: 385 QV-TLKGLS--PDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G   +AL L  EM   G   + V YN+ I  L  +  +E A  V   M  + I  +  
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++ L  GLC++  +  A +L +Q++ E +  +  +YN ++ + CK  ++  A  +L +M
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              G   D++TYGTLI+G CK G  + A+++   M+    +     YN +I  L +  + 
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNT 621

Query: 516 DAAKSLLQASQRIG-LLDAITYNTLINGYFI-NGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
             A +L +    +G   DA TY  +  G     G I EAF    EM + G       + +
Sbjct: 622 RDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRM 681

Query: 574 LINFLCKFG 582
           L   L   G
Sbjct: 682 LAEGLLNLG 690



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 1/370 (0%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++V +N ++N   +  +++  E +   M + GI  +V T+ TL+    R      A+ + 
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EM   G+ P+   + + +     EG ++ AL V + M++    P   T ++L  G C+ 
Sbjct: 209 EEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL 268

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V+ A     Q +      D  +YN  +N LC++ ++  A +++  M+  G  PD+ TY
Sbjct: 269 GRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTY 328

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             +++  CK G +E A  +   M +    P++  +N++I  LC    L+ A  L +    
Sbjct: 329 NIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTL 388

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  T+N LIN     G    A  +F EM++ G   ++V YN LI+ LC  G   +
Sbjct: 389 KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGK 448

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +L+K M   G     VTY T++    K    EE  E+ D M L G+S +  T+N +I 
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 508

Query: 647 PLLGEKSAED 656
            L  +K  +D
Sbjct: 509 GLCKDKRIDD 518


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 254/508 (50%), Gaps = 10/508 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G T  A  V++  +  G +V + A+N  ++   +  ++    +L   M    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---P 140

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  LC   ++ EALSL   ML  G  P+VV + +++   C+      A+
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++  +M         PN VT+N IING C+ GRV+ A E    +   G   +  +Y T++
Sbjct: 201 EVLDEM---RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G       E+   L  EM+++  MPN V ++  + +    G VE A+ VL  M   H C
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SGHGC 316

Query: 392 PDHFTY-SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             + T  +I+   +C+ G V  AF+  N +       D  SY  ++  LC++     AK+
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL  M+ +   P+ +T+ T I   C+ G IE A  + E M +   + N+V YN+++NG C
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               +D+A  L  +       + ITY TL+ G     ++  A  + +EM     A N V 
Sbjct: 437 VQGRVDSALELFYSMP--CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N+L++F C+ G   +A EL++ M+ HG  P+ +TY TL+   +K+C+ EE +EL   +V
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +GVSPD  TY++II  L  E   E+ +
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAI 582



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 248/498 (49%), Gaps = 10/498 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ LV    + G  + A  +I  + V   +   + +   +  L     +G    L  +M+
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVAPDA---YTYTPIIRGLCDRGRVGEALSLLDDML 172

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +V T+ +++ A+CK     +A+ +   M   G  PN+V +N+IIN  C+ G ++
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +   ++   S     P++V++  ++ G C   R E  EE+   M++     N  T+ 
Sbjct: 233 DAREFLNRL---SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+  + RGG  E A+++ ++M   G   N  + N  I+ +  +G V+ A   L++M   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  +Y+ + KGLCR    + A +L  +++ ++   +  ++N  I  LC+   +  A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L+  M   G   +I+TY  L++G+C  G ++ A++++ +M     KPN + Y +++ G
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTG 466

Query: 509 LCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC    LDAA  LL +  Q+    + +T+N L++ +   G + EA  +  +M   G   N
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + YN L++ + K    ++A EL+  ++ +G+ PD VTY++++   S+    EE I++  
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586

Query: 628 DMVLSGVSPDNQTYNAII 645
            +   G+ P    YN I+
Sbjct: 587 IVQDLGMRPKAVIYNKIL 604



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 251/508 (49%), Gaps = 11/508 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L  L+ +L  +  C+ +   +  L+ A  +      A +V+ +++ KG + +I  +N  +
Sbjct: 165 LSLLDDML--HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           + + +   +    +    + S G+  +  ++  V+  LC   + E+   L+  M++    
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN V F+M++   C+ G +E A+++  +   MSG     N+   N +IN  CK GRV+ A
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQ---MSGHGCAANTTLCNIVINTICKQGRVDDA 339

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M   G   +  +Y T++ G  R    E+A  L  EMV++   PN V +N+ I  
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
           L  +G +E A  ++  M  +H C  +  TY+ L  G C  G V  A +L   +       
Sbjct: 400 LCQKGLIEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKP 455

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +Y  L+  LC +  L AA +LL+ M+ +   P+++T+  L+  +C+ G ++ A+++ 
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           E M +    PNL+ YN++++G+ KD + + A  LL      G+  D +TY+++I      
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 575

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            ++ EA  MF  ++++G+    V YN ++  LCK      A +    M+ +G +P+ +TY
Sbjct: 576 DRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            TL+   +     +E  +L  ++   GV
Sbjct: 636 ITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 216/482 (44%), Gaps = 42/482 (8%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +LD       TP +  ++ ++    + G  + A + + +L   G      ++   L  L 
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 261

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                    +L+ EM+    + N  TF++++   C+   +E A+ +  +M   G   N  
Sbjct: 262 AAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT 321

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             N++IN  C+ G ++ A +    MG        P+++++  ++ G C+  R E A+E+ 
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCS---PDTISYTTVLKGLCRAERWEDAKELL 378

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M++     N  T+ T I    + G  E+A  L ++M + G   N V YN+ ++    +
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 373 GDVEGALFV--------------------------------LSDMIDKHICPDHFTYSIL 400
           G V+ AL +                                L++M+ K   P+  T+++L
Sbjct: 439 GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 498

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               C+ G + +A +L  Q++E     +  +YN L++ + K  N   A +LL  ++  G+
Sbjct: 499 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGV 558

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PDI+TY ++I    +   +E A++++  ++ +  +P  VIYN I+  LCK  + D A  
Sbjct: 559 SPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAID 618

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                   G + + +TY TLI G      + E   +  E+ + G+ +NK   N+L  +  
Sbjct: 619 FFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV-LNK---NLLEEWRP 674

Query: 580 KF 581
           KF
Sbjct: 675 KF 676



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 205/451 (45%), Gaps = 24/451 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLL------DSYEI-------- 141
           I++ +    R DDA   +  L S     ++VS    L+GL       D  E+        
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      FD LVR   + G  E A  V++++   G + +    N  ++ + K   +   +
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +    M S G   +  ++  V+  LC+  + E+A  L   M++    PN V FN  I   
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 400

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G +E A  L  +   MS      N VT+N ++NGFC  GRV+ A E+ Y+M      
Sbjct: 401 CQKGLIEQATMLIEQ---MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCK 454

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TL+ G       + A  L  EM+++   PN V +N  + +   +G ++ A+ +
Sbjct: 455 PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M++    P+  TY+ L  G+ ++   ++A +L + ++   +  D  +Y+ +I  L +
Sbjct: 515 VEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSR 574

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            + +  A ++   +   G+ P  + Y  ++   CK  N +GA+  +  M      PN + 
Sbjct: 575 EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELT 634

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           Y ++I GL  +  L   + LL+     G+L+
Sbjct: 635 YITLIEGLANEDFLKETRDLLRELCSRGVLN 665



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 33/327 (10%)

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ +  L A  D+  A  ++     +   PD +  + L + LCR G    A ++      
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM-----------IVRGLI---------- 461
                D ++YN L+   C+   L AA++L++SM           I+RGL           
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 462 -----------PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
                      P ++TY  L++  CK      A++V + M+     PN+V YN IING+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           ++  +D A+  L      G   D ++Y T++ G     +  +   +F+EM       N+V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            +++L+ F C+ G  ++A ++++ M  HG   +      ++    K    ++  +  ++M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
              G SPD  +Y  ++  L   +  ED
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWED 373


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 240/478 (50%), Gaps = 4/478 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G    A ++ QKL   G + S  A+ + +  L   N      +L+ +M 
Sbjct: 13  YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +  T+N++I A CK   LEEA  L  +M++ G  P+VV +N +++  C+   +E
Sbjct: 73  RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL LF +M  +      PN  +HN II G C+  +++ A ++ + M    I  +  +Y 
Sbjct: 133 EALLLFNEMERL---GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYG 189

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LIDG A+ G   EA +L   M+  G+ P+ V YN  IH +     ++ AL +   M  K
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P  FT++IL    C+ G + +AF+L  ++ ++  V D  +Y+ LI+ LC    +  A
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           + LL  M+ R   P ++T  TLI G CK G I+ A +V + M    + P++V YN++++G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C+    + A+ LL      GL  + +TY  L++G     ++ EA  +F++M++ G A N
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
              Y  LI   C  G      +L   M+  GI PD+V Y TL     K+      +E+
Sbjct: 430 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 235/429 (54%), Gaps = 4/429 (0%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           ++ ++I  L K  KL +A +L+ ++L SG+ P+ V +  +I+  C     + A +LF  M
Sbjct: 12  SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
              +     P+ VT+N +I+  CK G +E A ++   MI+ G   +V TY T++DG  + 
Sbjct: 72  ---NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              EEAL L +EM + G  PN   +N+ I  L  +  ++ A  V  +M  K I PD ++Y
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSY 188

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
            IL  GL + G + +A+KL  ++L+  +   A +YN++I+ +C +  L  A +L  SM  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           +G  P   T+  LID +CK G ++ A ++ + M      P++V Y+++I+GLC  A +D 
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 518 AKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+ LL+   +R      +T NTLI+G    G+I EA  +   M + G + + V YN L++
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C+ G  ++AREL+  M+  G+ P+ VTYT LV+   K     E   +   M  SG +P
Sbjct: 369 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428

Query: 637 DNQTYNAII 645
           +  TY A+I
Sbjct: 429 NLFTYTALI 437



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 242/475 (50%), Gaps = 6/475 (1%)

Query: 177 HSVSIHAWNN--FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            +VS  +W+    +  L K  ++     L+++++  G   +   +  +I+ LC     ++
Sbjct: 4   RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L+  M + G  P+ V +N++I+ +C+ G LE A  L +KM     D  +P+ VT+N 
Sbjct: 64  ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM---IEDGHVPDVVTYNT 120

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +++G CK  RVE A  +   M + G   N R++ T+I G  +    ++A ++  EM  + 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P++  Y   I  L   G +  A  +   M+D  I P   TY+++  G+C    + +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L   +  +      +++NILI+  CK   L  A +LL  M   G +PD++TY TLI G 
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           C    ++ A  + E+M K + KP +V  N++I+GLCK   +  A+ +L A    G   D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYNTL++G+   G+   A  + S+M   G+A N V Y  L++ LCK     +A  +   
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           M   G  P+  TYT L+  F      +  ++L  +MV +G+SPD+  Y  + + L
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 245/521 (47%), Gaps = 23/521 (4%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +++H L     FDDA  L  ++                 +   C  +P  ++ ++ A  +
Sbjct: 50  SLIHGLCMANSFDDARELFADM-----------------NRRGCPPSPVTYNVMIDASCK 92

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A D+I+K+   GH   +  +N  +  L K + +     L+ EM   G   N  +
Sbjct: 93  RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 152

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            N +I  LC++ K+++A  +++ M    I P+   + ++I+   + G L  A KLF++M 
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRM- 211

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           + SG  + P++VT+N +I+G C    ++ A E+  +M   G   +  T+  LID + + G
Sbjct: 212 LDSG--ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG 269

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             +EA RL   M   G +P+ V Y++ I  L +   V+ A  +L DM+ +   P   T +
Sbjct: 270 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC+ G +K+A ++ + ++      D  +YN L++  C++     A++LLS M+ R
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL P+++TY  L+ G CK   +  A  V+  MK     PNL  Y ++I G C    +D  
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV--GIAVNKVGYNILI 575
             L       G+  D + Y TL      +G+ A A  +  E R      A     Y   +
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAV 509

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + L + G  + A   ++ M+  G +P      +LV    K+
Sbjct: 510 DGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS 550



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 214/408 (52%), Gaps = 4/408 (0%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M +  + P+   + ++I+   + G L  A  LF+K+ + SG  V P++V +  +I+G C 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL-LHSG--VTPSTVAYTSLIHGLCM 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
               + A E+   M + G   +  TY  +ID   + G  EEA  L  +M++ G +P+ V 
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ +  L     VE AL + ++M      P+  +++ +  GLC+   + QA ++ +++ 
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
            + +  D++SY ILI+ L K+  L  A +L   M+  G+ P  +TY  +I G C    ++
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLI 540
            A++++++M+    +P+   +N +I+  CK   LD A  LL+     G + D +TY+TLI
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G     ++ +A  +  +M         V  N LI+ LCK G  ++ARE++  M+  G  
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           PD VTY TLV    +    E   EL  DMV  G++P+  TY A++S L
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 184/403 (45%), Gaps = 40/403 (9%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           Q    + A  V  +++ K       ++   +  L K  ++   +KL++ M+  G   +  
Sbjct: 162 QQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAV 221

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N+VI+ +C    L+EAL L+  M   G  P+   FN++I+  C+ G L+ A +L ++M
Sbjct: 222 TYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRM 281

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
              + D  +P+ VT++ +I+G C + RV+ A  +   M+K      V T  TLI G  + 
Sbjct: 282 ---TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKA 338

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +EA  + D MV  G  P+ V YN+ +H     G  E A  +LSDM+ + + P+  TY
Sbjct: 339 GRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTY 398

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  GLC+   + +A  +  Q+       + ++Y  LI   C +  +    +L   M+ 
Sbjct: 399 TALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC 458

Query: 458 RGLIPDIITYGTL-------------------------------------IDGYCKGGNI 480
            G+ PD + YGTL                                     +DG  + G +
Sbjct: 459 AGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKM 518

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           E A+    +M +  + P      S++ GLCK      A+++L+
Sbjct: 519 EMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 188/441 (42%), Gaps = 64/441 (14%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA 147
           NR SH+      I+  L    + D A  +  + M A  + P  +  G+L           
Sbjct: 149 NRRSHN-----TIILGLCQQSKIDQACQVF-HEMEAKDIPPDSWSYGIL----------- 191

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             D L +A    G    AY + Q++   G + S   +N  +  +     +    +L+K M
Sbjct: 192 -IDGLAKA----GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   +  TFN++I A CK  KL+EA  L  RM   G  P+VV ++ +I+  C +  +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L   M         P  VT N +I+G CK GR++ A E+  AM+ +G   +V TY
Sbjct: 307 DDARHLLEDM---VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL------------FAE--- 372
            TL+ G+ R G +E A  L  +MV RGL PN V Y + +  L            FA+   
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 373 --------------------GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
                               G V+G L +  +M+   I PDH  Y  L   LC++G   +
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 413 AFKL---HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           A ++     + L     GD   Y   ++ L ++  +  A   +  M+  G +P      +
Sbjct: 484 ALEILREGRESLRSEAWGDEV-YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCAS 542

Query: 470 LIDGYCKGGNIEGAVQVYENM 490
           L+ G CK G    A  V E +
Sbjct: 543 LVAGLCKSGQGGEARAVLEEI 563



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 55/341 (16%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ +   F+ L+ A  + G  + A+ +++++   GH   +  ++  +S L  +  +    
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L ++MV       V T N +I+ LCK  +++EA  +   M+ SG  P+VV +N +++  
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 370

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G  E A +L   M V  G  + PN VT+  +++G CK  R+  A  +   M  +G  
Sbjct: 371 CRAGQTERARELLSDM-VARG--LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS----------------- 364
            N+ TY  LI G+   G  +  L+L  EMV  G+ P++VVY +                 
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 365 --------------------TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
                                +  L   G +E AL  + DM+     P     + L  GL
Sbjct: 488 LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547

Query: 405 CRNGCVKQAFKLHNQVLE---------------EHMVGDAY 430
           C++G   +A  +  ++++               E MVG  Y
Sbjct: 548 CKSGQGGEARAVLEEIMDLAYGGKARGKAAKFVEEMVGKGY 588



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%)

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D+ +Y  LI+G    GK+ +A  +F ++ + G+  + V Y  LI+ LC    +  AREL 
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M   G  P  VTY  ++    K    EE  +L   M+  G  PD  TYN ++  L   
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 652 KSAEDQV 658
              E+ +
Sbjct: 129 SRVEEAL 135


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 173/644 (26%), Positives = 307/644 (47%), Gaps = 45/644 (6%)

Query: 21  HVGKQFANPSTEDIVFRAI----CVNLRQRKWK---ILEQMAPSLTNSLVNRVVSEFRKS 73
           H+   FA P++ +  F+AI    C  L + +WK    L+Q++P L    V  +V+   K 
Sbjct: 30  HISSHFAVPASRE-PFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVA-VHKD 87

Query: 74  PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE 133
            +  ++F+ W+ +   + H++    ++++ LV  R F                +P + + 
Sbjct: 88  TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVF----------------APADHIR 131

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            L+                ++AC          D + ++   G   S+++ N  L  L K
Sbjct: 132 ILM----------------IKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAK 175

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
              +     LYK+M++ G   ++ TFN +I  L K+ K+ EA  +  ++ +  + P+V  
Sbjct: 176 FEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFT 235

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +I   C+  +L+ A  +F +M     D   PNSVT++ +ING C  GRV+ A ++  
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCD---PNSVTYSTLINGLCNEGRVDEALDMLE 292

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            MI+ GI+  V TY   I         EEA+ L   M KRG  PN   Y + I  L   G
Sbjct: 293 EMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLG 352

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +E A+ +   M+ + + P+  TY+ L   LC  G    A K+ + +     + +  +YN
Sbjct: 353 KLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 412

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +I  LC   ++  A  L   M+  G +P ++TY TLI+GY   GN+  A ++ + MK+ 
Sbjct: 413 EIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN 472

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
             +P+   YN +++G  K   L++A    Q     GL  + ++Y  LI+G+  +GK+  A
Sbjct: 473 GCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            ++   M  +G   N   YN +IN L K   + +A ++   M+  G++P+ +TYTTL+  
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDG 592

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +N   +   ++  DM      P+  TY+++I  L  E  A++
Sbjct: 593 LCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/540 (29%), Positives = 261/540 (48%), Gaps = 14/540 (2%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           L++G+  + N    L+   G+ D    E C      +  L+      G  + A D+++++
Sbjct: 239 LILGHCRNRN----LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
             KG   +++ +   ++ L  +       +L   M   G   NV T+  +I  L +  KL
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           E A+ LY++MLK G+ PN V +N +INE C  G    ALK+F     M G   L N+ T+
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH---WMEGHGSLANTQTY 411

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N II G C  G +E A  +   M+K G    V TY TLI+GY   G+   A RL D M +
Sbjct: 412 NEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+   YN  +      G +E A F   +M++  + P+  +Y+ L  G  ++G V  
Sbjct: 472 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDI 531

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  L  ++ E     +  SYN +IN L K N  + A+++   M+ +GL+P++ITY TLID
Sbjct: 532 ALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLID 591

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G C+ G  + A +++ +M+K +  PNL  Y+S+I GLC++   D A+ +      IG   
Sbjct: 592 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM----SEIGCEP 647

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
            + TY+TL++G    G+  EA  +  +M+  G   ++  Y  L+   CK      A ++ 
Sbjct: 648 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 707

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             +   G       Y  L+    K    EE   L D+M+    + D   +  ++  LL E
Sbjct: 708 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE 767



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 190/405 (46%), Gaps = 13/405 (3%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    ++ +++     G  E A  + +K+   G   ++  +N  ++  +    +    +L
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 465

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
              M   G   +  T+N ++    K  KLE A   +  M++ G+ PN V +  +I+   +
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ AL L ++M  M  +   PN  ++N +ING  K  R   AE+I   M++ G+  N
Sbjct: 526 DGKVDIALSLLKRMEEMGCN---PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPN 582

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY TLIDG  R G ++ A ++  +M KR  +PN   Y+S I+ L  EG  + A     
Sbjct: 583 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----E 638

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M +    P   TYS L  GLCR G   +A +L   + E     D   Y  L+   CK+ 
Sbjct: 639 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 698

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A ++  S+  +G    +  Y  LI   CK G +E A  +++NM + E   + +++ 
Sbjct: 699 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWT 758

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGK 548
            +++GL K+  LD    LL       ++++  +   I  Y I G+
Sbjct: 759 VLVDGLLKEGELDLCMKLLH------IMESKNFTPNIQTYVILGR 797



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 42/298 (14%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P  + AL+   ++ G  + A  ++++++  G + ++ ++N  ++ L K N      K+  
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +MV  G + NV T+  +I  LC+  + + A  +++ M K    PN+  ++ +I   CQ G
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE---------------E 310
             + A +       MS     P   T++ +++G C+ GR   AE               E
Sbjct: 633 KADEAER-------MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 311 IRYAMIKA--------------------GIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           I Y+++ A                    G   ++  Y  LI    + G  EEA  L D M
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 745

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +++    + +V+   +  L  EG+++  + +L  M  K+  P+  TY IL + L R G
Sbjct: 746 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 803


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 165/578 (28%), Positives = 281/578 (48%), Gaps = 43/578 (7%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F DA  L+ + +S++    L  L  L  + ++ + +  + D  + A  Q+     A  + 
Sbjct: 105 FSDAKSLLISFISSDRQHELHKL-ILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIF 163

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKL---NEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
            K+K   +  ++   N  ++ LV+    + I    ++ K+ +  G V N N+FN++IY  
Sbjct: 164 NKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGY 223

Query: 227 CKECK-----------------------------------LEEALSLYYRMLKSGIWPNV 251
           C E K                                   L+EA  L   M   G+ PN 
Sbjct: 224 CLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNK 283

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             +NM++   C++G L+ A K+     +M+ +++LP   T+N ++NGFC  G+++ A  I
Sbjct: 284 HTYNMLVCGYCRLGLLKEATKVIE---IMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRI 340

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
           R  M K  +  +V TY TLIDG ++   S E   L +EM K+G+  N V YN  + W+  
Sbjct: 341 RDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCK 400

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +G++  A   L  M +  + PD  TY+ L    C+ G + +AF++ +++  + +  D ++
Sbjct: 401 KGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWT 460

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            N +++ LC    L  A  LL S   RG I D ++YG LI GY K    + A+ +++ MK
Sbjct: 461 LNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMK 520

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           + +  P+ + YNS+I GLC+   +D A   L      GL+ D  TYN +I+G+ + G + 
Sbjct: 521 ERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVE 580

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +AF   +EM       +    NIL+  LC+ G  ++A +L   ++  G   D VTY T++
Sbjct: 581 KAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTII 640

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +   K    E   +L  +M    + PD  TY  II+ L
Sbjct: 641 SSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 233/464 (50%), Gaps = 7/464 (1%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK---ECKLEEALSLYYRMLKSGIW 248
           V++++     +++ +M    Y  N+ T N ++ +L +      +  A  +    +K G+ 
Sbjct: 151 VQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVV 210

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN   FN++I   C    ++ AL    KM   S    +P++V++N I++   K   ++ A
Sbjct: 211 PNTNSFNILIYGYCLESKVKDALDWVNKM---SEFGCVPDTVSYNTILDALLKRRLLQEA 267

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            ++   M   G+  N  TY  L+ GY R G  +EA ++ + M +  L+P    YN  ++ 
Sbjct: 268 RDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNG 327

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
              +G ++ A  +  +M   ++ PD  TY+ L  G  +     + + L  ++ ++ +  +
Sbjct: 328 FCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCN 387

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           A +YNI++ ++CK  N+  A   L  M   GL PD +TY TLI  YCK G +  A ++ +
Sbjct: 388 AVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMD 447

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFING 547
            M     K +    N+I++ LC +  LD A +LL  AS+R  +LD ++Y  LI GYF + 
Sbjct: 448 EMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDE 507

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           K   A  ++ EM+   I  + + YN +I  LC+     QA + +  M+ +G++PD  TY 
Sbjct: 508 KGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            ++  F    + E+  + H++M+ +   PD  T N ++  L  E
Sbjct: 568 IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCRE 611



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 219/462 (47%), Gaps = 4/462 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++ A  +    + A D++  +K KG S + H +N  +    +L  +    
Sbjct: 244 CVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEAT 303

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K+ + M     +  V T+N+++   C + K++EA  +   M K  + P+VV +N +I+  
Sbjct: 304 KVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGC 363

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            Q  D      L  +   M    V  N+VT+N I+   CK G +  A      M + G+ 
Sbjct: 364 SQWRDSSEVYSLIEE---MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLS 420

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY TLI  Y + G   +A R+ DEM  +GL  +    N+ +H L  E  ++ A  +
Sbjct: 421 PDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNL 480

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L     +    D  +Y IL  G  ++    +A  L +++ E  ++    +YN +I  LC+
Sbjct: 481 LCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQ 540

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S  +  A   L+ M+  GL+PD  TY  +I G+C  GN+E A Q +  M +   KP++  
Sbjct: 541 SRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYT 600

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            N ++ GLC++  L+ A  L       G  +D +TYNT+I+     GK   A+ + +EM 
Sbjct: 601 CNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEME 660

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +  ++  Y ++I  L   G  ++A E    M+  GI+ D
Sbjct: 661 AKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHD 702



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 214/463 (46%), Gaps = 14/463 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ LV      G  + A+ +  +++       +  +N  +    +  +    + L +EM
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N  T+N+++  +CK+  + EA +   +M ++G+ P+ V +N +I   C+ G +
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
               K FR M  M+   +  ++ T N I++  C   +++ A  +  +  K G   +  +Y
Sbjct: 440 G---KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI GY +    + AL L DEM +R +MP+ + YNS I  L     V+ A+  L++M++
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  TY+I+  G C  G V++AF+ HN+++E     D Y+ NIL+  LC+   L  
Sbjct: 557 NGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEK 616

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L ++++ +G   D++TY T+I   CK G  E A  +   M+  +  P+   Y  II 
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            L     +  A+         G++             +  +++E F   S          
Sbjct: 677 ALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKS---------- 726

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            + Y+  IN LC    Y+ A  L   +   G+  +  TY  L+
Sbjct: 727 -IAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLM 768



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 199/414 (48%), Gaps = 7/414 (1%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL---GRV 305
           P+    +  I    Q+     A ++F KM  ++     PN +T N ++N   +      +
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLN---YRPNLLTCNTLMNSLVRYPSSSSI 194

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A ++    IK G+  N  ++  LI GY      ++AL   ++M + G +P+ V YN+ 
Sbjct: 195 LLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTI 254

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           +  L     ++ A  +L DM  K + P+  TY++L  G CR G +K+A K+   +   ++
Sbjct: 255 LDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNL 314

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
           +   ++YN+L+N  C    +  A ++   M    ++PD++TY TLIDG  +  +      
Sbjct: 315 LPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYS 374

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           + E M K   K N V YN I+  +CK  ++  A + L   +  GL  D +TYNTLI  Y 
Sbjct: 375 LIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYC 434

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             GK+ +AF M  EM + G+ ++    N +++ LC      +A  L+      G I D V
Sbjct: 435 KAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEV 494

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +Y  L+  + K+   +  + L D+M    + P   TYN++I  L   +  +  +
Sbjct: 495 SYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAI 548


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 160/617 (25%), Positives = 308/617 (49%), Gaps = 37/617 (5%)

Query: 63  VNRVVSEF-RKSPKLALEFYTWVGENN--RFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           +NR +++  R SP  A+  Y  +      + + ++ +   ++       R D     +GN
Sbjct: 58  LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117

Query: 120 LMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA-------------- 161
           ++      ++++    L+GL       K T    D ++R  T++G               
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCAD----KRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173

Query: 162 -----TEGAYDVIQKL---KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                ++ A +++  +   +  G    + ++N  L+   K  +  + +  Y EM+  G +
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGIL 233

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V T++ +I ALCK   +++A+ +   M+K+G+ P+ + +N I++  C  G  + A+  
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            +KM     D V PN VT++ ++N  CK GR   A +I  +M K G++ ++ TY TL+ G
Sbjct: 294 LKKM---RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           YA  G+  E   L D MV+ G+ P++ V+N  I     +  V+ A+ V S M    + P+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y  +   LC++G V  A     Q+++E +  +   Y  LI+ LC  +    A++L+ 
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+ RG+  + I + ++ID +CK G +  + ++++ M ++  KP+++ YN++I+G C   
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530

Query: 514 SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  LL +   +G+  D +TY TLINGY    ++ +A A+F EM + G++ N + YN
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           I++  L        A+EL   +   G   +  TY  ++    KN   +E + +  ++ L+
Sbjct: 591 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 650

Query: 633 GVSPDNQTYNAIISPLL 649
            +  + +T+N +I  LL
Sbjct: 651 DLQLETRTFNIMIGALL 667



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 256/523 (48%), Gaps = 33/523 (6%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G ++ AY    ++  +G    +  +++ ++ L K   + +  ++   MV  G + +  T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-- 277
           N +++  C   + +EA+    +M   G+ PNVV ++ ++N  C+ G    A K+F  M  
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 278 ------------------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
                                          +M  + + P+    N +I  + K  +V+ 
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M + G++ NV  Y T+ID   + GS ++A+   ++M+  GL PN +VY S IH
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L      + A  ++ +M+D+ IC +   ++ +    C+ G V ++ KL + ++   +  
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +YN LI+  C +  +  A +LL+SM+  G+ PDI+TYGTLI+GYC+   ++ A+ ++
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           + M      PN++ YN I+ GL       AAK L  +  + G  L+  TYN +++G   N
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
               EA  MF  +    + +    +NI+I  L K G   +A++L      +G++PD  TY
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +     +  S EE+ +L   M  +G S D++  N+I+  LL
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 204/429 (47%), Gaps = 4/429 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G +  A  +   +  +G    I  +   L        +     L   MV  G   + + F
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I A  K+ K+++A+ ++ +M + G+ PNVVC+  +I+  C+ G ++ A+  F +M  
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM-- 437

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              + + PN + +  +I+G C   + + AEE+   M+  GI  N   + ++ID + + G 
Sbjct: 438 -IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             E+ +L D MV+ G+ P+ + YN+ I      G ++ A  +L+ M+   + PD  TY  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G CR   +  A  L  +++   +  +  +YNI++  L  +   AAAK+L  S+   G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
              ++ TY  ++ G CK    + A+++++N+   + +     +N +I  L K   +D AK
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L  A    GL+ D  TY+ +       G + E   +F  M   G + +    N ++  L
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 579 CKFGCYQQA 587
            + G   +A
Sbjct: 737 LQRGDITRA 745



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 183/375 (48%), Gaps = 3/375 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  +    + A  V  K++  G + ++  +   +  L K   +      +++M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N+  +  +I+ LC   K ++A  L   ML  GI  N + FN II+  C+ G +
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V P+ +T+N +I+G C  G+++ A ++  +M+  G+  ++ TY
Sbjct: 498 IESEKLF---DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY R    ++AL L  EMV  G+ PN + YN  +  LF       A  +   +  
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K   +  
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L ++    GL+PD+ TY  + +   + G++E    ++ +M++     +  + NSI+ 
Sbjct: 675 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 735 KLLQRGDITRAGTYL 749



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 6/351 (1%)

Query: 312 RYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           R A   AG +   V TYA LI    R G  +        +VK+G   + + +   +  L 
Sbjct: 79  RMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLC 138

Query: 371 AEGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-- 427
           A+     A+  VL  M +    PD F+Y+ L KGLC     ++A +L + + ++   G  
Sbjct: 139 ADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSP 198

Query: 428 -DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  SYN ++N   K  +   A      M+ RG++PD++TY ++I   CK   ++ A++V
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
              M K    P+ + YNSI++G C       A   L+  +  G+  + +TY++L+N    
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           NG+  EA  +F  M   G+  +   Y  L+      G   +   L+ +M+ +GI PD+  
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  L+  ++K    ++ + +   M   G++P+   Y  +I  L    S +D
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDD 429



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 3/253 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+  C   G  + A  ++  +   G    I  +   ++   +++ +     L+KEM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G   N+ T+N+++  L    +   A  LY  + KSG    +  +N+I++  C+    
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 637

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL++F+ + +     +   + T N +I    K GR++ A+++  A    G+  +VRTY
Sbjct: 638 DEALRMFQNLCLTD---LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + + +     GS EE   L   M + G   ++ + NS +  L   GD+  A   L  + +
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754

Query: 388 KHICPDHFTYSIL 400
           KH   +  T S L
Sbjct: 755 KHFSLEASTASFL 767


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 160/617 (25%), Positives = 308/617 (49%), Gaps = 37/617 (5%)

Query: 63  VNRVVSEF-RKSPKLALEFYTWVGENN--RFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           +NR +++  R SP  A+  Y  +      + + ++ +   ++       R D     +GN
Sbjct: 58  LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117

Query: 120 LMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA-------------- 161
           ++      ++++    L+GL       K T    D ++R  T++G               
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCAD----KRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173

Query: 162 -----TEGAYDVIQKL---KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                ++ A +++  +   +  G    + ++N  L+   K  +  + +  Y EM+  G +
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGIL 233

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V T++ +I ALCK   +++A+ +   M+K+G+ P+ + +N I++  C  G  + A+  
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            +KM     D V PN VT++ ++N  CK GR   A +I  +M K G++ ++ TY TL+ G
Sbjct: 294 LKKM---RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQG 350

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           YA  G+  E   L D MV+ G+ P++ V+N  I     +  V+ A+ V S M    + P+
Sbjct: 351 YATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPN 410

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y  +   LC++G V  A     Q+++E +  +   Y  LI+ LC  +    A++L+ 
Sbjct: 411 VVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELIL 470

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+ RG+  + I + ++ID +CK G +  + ++++ M ++  KP+++ YN++I+G C   
Sbjct: 471 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAG 530

Query: 514 SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  LL +   +G+  D +TY TLINGY    ++ +A A+F EM + G++ N + YN
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           I++  L        A+EL   +   G   +  TY  ++    KN   +E + +  ++ L+
Sbjct: 591 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 650

Query: 633 GVSPDNQTYNAIISPLL 649
            +  + +T+N +I  LL
Sbjct: 651 DLQLETRTFNIMIGALL 667



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 256/523 (48%), Gaps = 33/523 (6%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G ++ AY    ++  +G    +  +++ ++ L K   + +  ++   MV  G + +  T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-- 277
           N +++  C   + +EA+    +M   G+ PNVV ++ ++N  C+ G    A K+F  M  
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 278 ------------------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
                                          +M  + + P+    N +I  + K  +V+ 
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M + G++ NV  Y T+ID   + GS ++A+   ++M+  GL PN +VY S IH
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L      + A  ++ +M+D+ IC +   ++ +    C+ G V ++ KL + ++   +  
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 514

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +YN LI+  C +  +  A +LL+SM+  G+ PDI+TYGTLI+GYC+   ++ A+ ++
Sbjct: 515 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 574

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           + M      PN++ YN I+ GL       AAK L  +  + G  L+  TYN +++G   N
Sbjct: 575 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 634

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
               EA  MF  +    + +    +NI+I  L K G   +A++L      +G++PD  TY
Sbjct: 635 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +     +  S EE+ +L   M  +G S D++  N+I+  LL
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 204/429 (47%), Gaps = 4/429 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G +  A  +   +  +G    I  +   L        +     L   MV  G   + + F
Sbjct: 320 GRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I A  K+ K+++A+ ++ +M + G+ PNVVC+  +I+  C+ G ++ A+  F +M  
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM-- 437

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              + + PN + +  +I+G C   + + AEE+   M+  GI  N   + ++ID + + G 
Sbjct: 438 -IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             E+ +L D MV+ G+ P+ + YN+ I      G ++ A  +L+ M+   + PD  TY  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G CR   +  A  L  +++   +  +  +YNI++  L  +   AAAK+L  S+   G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
              ++ TY  ++ G CK    + A+++++N+   + +     +N +I  L K   +D AK
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L  A    GL+ D  TY+ +       G + E   +F  M   G + +    N ++  L
Sbjct: 677 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 736

Query: 579 CKFGCYQQA 587
            + G   +A
Sbjct: 737 LQRGDITRA 745



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 183/375 (48%), Gaps = 3/375 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  +    + A  V  K++  G + ++  +   +  L K   +      +++M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N+  +  +I+ LC   K ++A  L   ML  GI  N + FN II+  C+ G +
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V P+ +T+N +I+G C  G+++ A ++  +M+  G+  ++ TY
Sbjct: 498 IESEKLF---DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY R    ++AL L  EMV  G+ PN + YN  +  LF       A  +   +  
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K   +  
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L ++    GL+PD+ TY  + +   + G++E    ++ +M++     +  + NSI+ 
Sbjct: 675 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 735 KLLQRGDITRAGTYL 749



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 164/351 (46%), Gaps = 6/351 (1%)

Query: 312 RYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           R A   AG +   V TYA LI    R G  +        +VK+G   + + +   +  L 
Sbjct: 79  RMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLC 138

Query: 371 AEGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-- 427
           A+     A+  VL  M +    PD F+Y+ L KGLC     ++A +L + + ++   G  
Sbjct: 139 ADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSP 198

Query: 428 -DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  SYN ++N   K  +   A      M+ RG++PD++TY ++I   CK   ++ A++V
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
              M K    P+ + YNSI++G C       A   L+  +  G+  + +TY++L+N    
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           NG+  EA  +F  M   G+  +   Y  L+      G   +   L+ +M+ +GI PD+  
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  L+  ++K    ++ + +   M   G++P+   Y  +I  L    S +D
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDD 429



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 3/253 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+  C   G  + A  ++  +   G    I  +   ++   +++ +     L+KEM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G   N+ T+N+++  L    +   A  LY  + KSG    +  +N+I++  C+    
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 637

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL++F+ + +     +   + T N +I    K GR++ A+++  A    G+  +VRTY
Sbjct: 638 DEALRMFQNLCLTD---LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 694

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + + +     GS EE   L   M + G   ++ + NS +  L   GD+  A   L  + +
Sbjct: 695 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754

Query: 388 KHICPDHFTYSIL 400
           KH   +  T S L
Sbjct: 755 KHFSLEASTASFL 767


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 260/540 (48%), Gaps = 46/540 (8%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T A   +LV    + G    A+D++ ++K  G   S+  +N  ++ L K  +      L+
Sbjct: 330 TEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLF 389

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           KEM   G   N  T++++I + C+  KL+ A+    +M+ +GI   V  +N +IN  C++
Sbjct: 390 KEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKL 449

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+L  A+  F +M       + P  V++  +I+G+C  G++  A  + + M   GI  N 
Sbjct: 450 GNLSAAVSFFDEM---IDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNT 506

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T+ TLI    R     +A RL DEM+++ +MPN V YN  I     EG+   A  +L+ 
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+ K + PD +TY  L   LC  G V +A K  + +  EH   +   Y+ L++  CK   
Sbjct: 567 MVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGR 626

Query: 445 LAAAKQLLSSMIVRG-----------------------------------LIPDIITYGT 469
           L  A  +   M+ RG                                   L PD + Y +
Sbjct: 627 LRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTS 686

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQAS 525
           +IDGY K G+++ A  +++ M      PN+V Y ++IN LCK   +D A    K +L ++
Sbjct: 687 MIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSN 746

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
                 + +TY   ++     G + +A  + ++M   G+  N V YNIL+   CK G  +
Sbjct: 747 STP---NHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVE 802

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A +L+  MI + I PD +TY+T++ +  +  + +  IE  D M+  G+ PD   YN +I
Sbjct: 803 EATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI 862



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/572 (26%), Positives = 274/572 (47%), Gaps = 20/572 (3%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY----------------EICKATPA 147
           L   RR D  L+L G ++S      +     ++ S+                E       
Sbjct: 203 LAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVV 262

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ L+    +      A ++   L  KG + S   +   +  L K+ E      +  EM
Sbjct: 263 VYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEM 322

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G+V      + ++  L ++ K+ +A  L  R+ K G  P++  +N +IN  C+ G  
Sbjct: 323 IELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKF 382

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  LF++MG      +  N VT++ +I+ FC+ G+++ A      MI AGI   V  Y
Sbjct: 383 DEAELLFKEMG---EKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI+G+ + G+   A+   DEM+ +GL P  V Y S I     +G +  A  +  +M  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I P+ +T++ L   L R   +  AF+L +++LE++M+ +  +YN++I   CK  N   
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL+ M+ +GL+PD  TY  LI   C  G +  A +  +++ +   K N + Y+++++
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLH 619

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CK+  L  A  + +   + G+ +D + Y  LI+G       +  F +   M +  +  
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRP 679

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +KV Y  +I+   K G  ++A  +  +MI  G  P+ VTYTTL+    K    ++   L 
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLW 739

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +M++S  +P++ TY   +  L  E S E  V
Sbjct: 740 KEMLVSNSTPNHVTYCCFLDHLAREGSMEKAV 771



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 164/619 (26%), Positives = 283/619 (45%), Gaps = 45/619 (7%)

Query: 45  QRKWKILEQ---MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           +  WKI      ++  L    V +V+       +LAL F+ ++G +  F+HS  S C ++
Sbjct: 53  KESWKIAFNDPFISTKLKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCILI 112

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALVRACTQIG 160
           H LVN   F  A  L+  L+    + P E  E LLD +E C    ++ FD L+++  Q  
Sbjct: 113 HALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQ-- 170

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
             +  +D +                                 +++ M  C  +  V T  
Sbjct: 171 -EKRMFDSVL--------------------------------IFRLMRQCELMPQVRTLG 197

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            V+  L K  +++  L L+  +L  GI P++  +  +I   C++ +   A ++ ++M   
Sbjct: 198 EVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--- 254

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
             +S   N V +N +I+G CK  RV  A EI+  +I+ G+  +  TY TL+ G  +    
Sbjct: 255 --ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEF 312

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           E    + DEM++ G +P     +S +  L  +G V  A  +++ +      P  F Y+ L
Sbjct: 313 EVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNAL 372

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              LC++G   +A  L  ++ E+ +  +  +Y+ILI+  C+   L  A   L  MI+ G+
Sbjct: 373 INSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
              +  Y +LI+G+CK GN+  AV  ++ M     KP +V Y S+I+G C    L  A  
Sbjct: 433 KITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFR 492

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L       G+  +  T+ TLI+  F   ++ +AF +F EM    +  N+V YN++I   C
Sbjct: 493 LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHC 552

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A EL+  M+  G++PD  TY  L++         E  +  DD+       +  
Sbjct: 553 KEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM 612

Query: 640 TYNAIISPLLGEKSAEDQV 658
            Y+A++     E    D +
Sbjct: 613 CYSALLHGYCKEGRLRDAL 631



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 185/368 (50%), Gaps = 4/368 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++    + G T  A++++ ++  KG     + +   +S L     +    K   ++
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
               +  N   ++ +++  CKE +L +AL +   M+K G+  ++VC+ ++I+   +  D 
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                L + M       + P+ V +  +I+G+ K G V+ A  I   MI  G   N+ TY
Sbjct: 663 SAVFGLLKNM---HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTY 719

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+   + G  ++A  L  EM+     PN+V Y   +  L  EG +E A+ + +DM+ 
Sbjct: 720 TTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML- 778

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K +  +  +Y+IL +G C+ G V++A KL +++++  +  D  +Y+ +I   C+  NL  
Sbjct: 779 KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDG 838

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +   +M+ +GL PD + Y  LI G C  G +  A ++ ++M +   KPN   + S+ +
Sbjct: 839 AIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSH 898

Query: 508 GLCKDASL 515
           G  +  S+
Sbjct: 899 GASRKFSI 906


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 248/474 (52%), Gaps = 4/474 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N+ L+ LV+ +++     +Y EM + G   +V TFN ++ ALC+  ++  A+ +   M 
Sbjct: 57  YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMS 116

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+ P+   F  ++    + G +E AL++  +M  M   +     VT N +ING+CKLG
Sbjct: 117 SRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT---KVTVNVLINGYCKLG 173

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           RVE A       I  G + +  TY T ++G  +      AL++ D MV+ G  P+   YN
Sbjct: 174 RVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYN 233

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             ++ L   G +E A  +L+ M+D+   PD  T++ L   LC    +++A  L  QV  +
Sbjct: 234 IVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVK 293

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D Y++NILIN LCK  +   A +L   M   G  PD +TY TLID  C  G +  A
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
           + + ++M+      + + YN+II+GLCK   ++ A+ +       G+  +AIT+NTLI+G
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 413

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              + KI +AF + ++M + G+  N + YN ++   CK G  ++A ++++ M  +G   D
Sbjct: 414 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 473

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            VTY TL+    K    +  +++   M + G+ P  + YN ++  L    +  D
Sbjct: 474 VVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 527



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 267/570 (46%), Gaps = 25/570 (4%)

Query: 84  VGENNRFSHSLESSCAIVHLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           V E  R  H ++    +VH  ++     + FDDA+ L+      N + PL  ++      
Sbjct: 5   VAEMRREGHQVK--LGVVHSFLDSYEGQQLFDDAVDLI-----LNQLQPLFGIQ------ 51

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
               A   V++ L+    +    +    V  ++  +G    +  +N  +  L + +++  
Sbjct: 52  ----ADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              + +EM S G   +  TF  ++    +E  +E AL +  RML+ G     V  N++IN
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C++G +E AL   ++      D   P+ +T+N  +NG C+   V  A ++   M++ G
Sbjct: 168 GYCKLGRVEDALGYIQQE---IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG 224

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            D +V TY  +++   + G  EEA  + ++MV RG +P+   +N+ I  L     +E AL
Sbjct: 225 HDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL 284

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   +  K + PD +T++IL   LC+ G    A +L  ++       D  +YN LI+ L
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C    L  A  LL  M   G     ITY T+IDG CK   IE A +V++ M       N 
Sbjct: 345 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 404

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + +N++I+GLCKD  +D A  L+      GL  + ITYN+++  Y   G I +A  +   
Sbjct: 405 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G  V+ V Y  LIN LCK G  Q A ++++ M + G+ P    Y  ++    +  +
Sbjct: 465 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNN 524

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + + L  +M   G  PD  TY  +   L
Sbjct: 525 IRDALSLFREMAEVGEPPDALTYKIVFRGL 554



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 228/489 (46%), Gaps = 24/489 (4%)

Query: 115 LLMGNLMSANSVSPLE-----FLEGLLDSYEI--------------CKATPAVFDALVRA 155
           +LM   MS+  V+P E      ++G ++   I              C AT    + L+  
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
             ++G  E A   IQ+    G       +N F++ L + + +G   K+   MV  G+  +
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T+N+V+  LCK  +LEEA  +  +M+  G  P++  FN +I   C    LE AL L R
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           ++ V     V P+  T N +IN  CK+G    A  +   M  +G   +  TY TLID   
Sbjct: 289 QVTV---KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLC 345

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G   +AL L  +M   G   + + YN+ I  L  +  +E A  V   M  + I  +  
Sbjct: 346 SLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 405

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++ L  GLC++  +  AF+L NQ++ E +  +  +YN ++ + CK  ++  A  +L +M
Sbjct: 406 TFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETM 465

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              G   D++TYGTLI+G CK G  + A++V   M+    +P    YN ++  L +  ++
Sbjct: 466 TANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNI 525

Query: 516 DAAKSLLQASQRIG-LLDAITYNTLINGYFI-NGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
             A SL +    +G   DA+TY  +  G     G I EAF    EM + G       + +
Sbjct: 526 RDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRM 585

Query: 574 LINFLCKFG 582
           L   L   G
Sbjct: 586 LAEGLLNLG 594



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 1/370 (0%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++V +N ++N   +  +++  E +   M   GI  +V T+ TL+    R      A+ + 
Sbjct: 53  DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EM  RG+ P+   + + +     EG +E AL V + M++        T ++L  G C+ 
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V+ A     Q + +    D  +YN  +N LC+++++  A +++  M+  G  PD+ TY
Sbjct: 173 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTY 232

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             +++  CK G +E A  +   M      P++  +N++I  LC    L+ A  L +    
Sbjct: 233 NIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTV 292

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  D  T+N LIN     G    A  +F EM+N G   ++V YN LI+ LC  G   +
Sbjct: 293 KGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGK 352

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +L+K M   G     +TY T++    K    EE  E+ D M L G+S +  T+N +I 
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412

Query: 647 PLLGEKSAED 656
            L  +K  +D
Sbjct: 413 GLCKDKKIDD 422


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 167/549 (30%), Positives = 269/549 (48%), Gaps = 38/549 (6%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K   A    ++RA  + G  E A    ++ K KG  +   A++  +  + K  +      
Sbjct: 221 KGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALG 280

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L +EM   G+V +   F  VI    K+ K+ EA+ +   ML  G   NVV    ++   C
Sbjct: 281 LLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYC 340

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + GDL+ AL+LF KM   + + + PN+VT+  II   CK G ++ A EI   M    I  
Sbjct: 341 KQGDLDSALELFDKM---NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISP 397

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDE--------------------------------- 349
            V    +LI GY +  S EEA +L DE                                 
Sbjct: 398 TVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWE 457

Query: 350 -MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            MV++G+ P+ V YN+ I     +GD++ A  V  +M++K + P+  TYS+L  G  + G
Sbjct: 458 KMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
             + AF L++++  E++    ++ NI+IN LCK+   + ++  L  ++  G IP  +TY 
Sbjct: 518 DTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYN 577

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            +IDG+ K G++  A+ VY  M K+   PN+  Y ++ING CK  ++D A  ++   +  
Sbjct: 578 CIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNK 637

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+ LD   Y  LI+G+   G +  A  + SE++ VG++ NKV Y+ +I+   K    + A
Sbjct: 638 GIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAA 697

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             L K MI  GI  D   YTTL++   K        EL+ +M+  G+ PD  TY+ +I  
Sbjct: 698 LHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHG 757

Query: 648 LLGEKSAED 656
           L  +   E+
Sbjct: 758 LCNKGQLEN 766



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 293/642 (45%), Gaps = 67/642 (10%)

Query: 12  SNSPLSRAFHVGKQFAN---PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVS 68
           S +PLS+  H    F     P+++D         L Q ++           ++L+N    
Sbjct: 35  SETPLSQNPHPNTNFPGKSAPTSQDSF-------LTQTQY----------IDTLLNH--- 74

Query: 69  EFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSP 128
             +  P+ AL ++TW  +      S+++ C ++H+L            + N  +++   P
Sbjct: 75  --QNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGP 132

Query: 129 LE--FLEGLLDSYEIC--KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           +    +  L++S      ++   VF+ L+ +  +      A D    L  K     +   
Sbjct: 133 VPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVM 192

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N FLS LVK N I     +Y +M S G   +  T +++I A  +E KLEEA   +     
Sbjct: 193 NIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKN 252

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G+  +   ++++I   C+  D   AL L R+   M     +P+ V    +I    K G+
Sbjct: 253 KGVELDARAYSIVIEAVCKKPDSVAALGLLRE---MRDKGWVPHEVIFTRVIGVCMKQGK 309

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A +++  M+  G   NV    TL+ GY + G  + AL L D+M + G+ PNNV Y  
Sbjct: 310 MLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAV 369

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I W    G+++ A  + + M +K I P  F  + L +G  +    ++A KL ++ +   
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV-AC 428

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
            + + ++YN L+++LCK   ++ A  +   M+ +G+ P +++Y  +I G+C+ G+++ A 
Sbjct: 429 GIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSAN 488

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYF 544
            V+  M +   KPNL+                                  TY+ L++GYF
Sbjct: 489 GVFVEMLEKGLKPNLI----------------------------------TYSVLMDGYF 514

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G    AF ++  MR   IA +    NI+IN LCK G   ++++ +K ++  G IP  +
Sbjct: 515 KKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCM 574

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           TY  ++  F K  S    + ++ +M   GVSP+  TY  +I+
Sbjct: 575 TYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLIN 616



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 233/468 (49%), Gaps = 34/468 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  ++  C + G  + AY++  ++K K  S ++   N+ +   +K        KL+ E 
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEA 425

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+CG + NV T+N ++  LCKE K+ EA S++ +M++ G+ P+VV +N +I   CQ GD+
Sbjct: 426 VACG-IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484

Query: 268 EFALKLFRKM--------------------------------GVMSGDSVLPNSVTHNCI 295
           + A  +F +M                                  M G+++ P+  T N I
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ING CK GR   +++    +++ G      TY  +IDG+ + GS   AL +  EM K G+
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV 604

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN   Y + I+      +++ AL V+ +M +K I  D   Y  L  G CR G +  A +
Sbjct: 605 SPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQ 664

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L +++ E  +  +   Y+ +I+   K  N+ AA  L   MI  G+  D+  Y TLI G  
Sbjct: 665 LLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLL 724

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI- 534
           K G +  A ++Y  M      P+L+ Y+ +I+GLC    L+ A+ +L+   R  +   + 
Sbjct: 725 KEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVF 784

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
            YNTLI G+F  G + EAF + +EM + G+  +   Y+IL+N   K G
Sbjct: 785 IYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 189/377 (50%), Gaps = 5/377 (1%)

Query: 146 PAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P+V  ++ ++    Q G  + A  V  ++  KG   ++  ++  +    K  +    + L
Sbjct: 466 PSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGL 525

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y  M       +  T N++I  LCK  +  E+     ++++ G  P  + +N II+   +
Sbjct: 526 YDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVK 585

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G +  AL ++ +M  +    V PN  T+  +INGFCK   ++ A ++   M   GI+ +
Sbjct: 586 EGSVNSALAVYTEMCKIG---VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V  Y  LIDG+ R G    A +L  E+ + GL PN VVY+S I       ++E AL +  
Sbjct: 643 VTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHK 702

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            MI++ I  D   Y+ L  GL + G +  A +L+ ++L + ++ D  +Y++LI+ LC   
Sbjct: 703 RMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKG 762

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            L  A+++L  M  + + P +  Y TLI G+ K GN++ A +++  M      P+   Y+
Sbjct: 763 QLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYD 822

Query: 504 SIINGLCKDASLDAAKS 520
            ++NG  KD +L +  S
Sbjct: 823 ILVNGKVKDGNLFSGAS 839


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 241/471 (51%), Gaps = 4/471 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A  +  ++K  G    +  +N+ +    K  E+    +L +EM   G   +V T+
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I   CK  ++E A   +  M + G+  NVV F+  ++  C+ G +  A+KLF +M V
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRV 321

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                +  N  T+ C+I+G CK GR++ A  +   M++ G+  NV TY  L+DG  +   
Sbjct: 322 RG---MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERK 378

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  +   M K G+  N ++Y + IH  F   + E AL +LS+M +K +  D   Y  
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L +GLC    + +A  L  ++ E  +  +   Y  +++   KS  +  A  +L  ++  G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P++ITY  LIDG CK G+I+ A+  +  M+ +   PN+  Y ++++GLCK+  L+ A 
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L       G+ LD + Y  L++GY   G + +AFA+ ++M + G+ ++   Y   I+  
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           C      +ARE+   MI HGI PD   Y  L++++ K  + EE I L D+M
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 171/608 (28%), Positives = 282/608 (46%), Gaps = 53/608 (8%)

Query: 84  VGENNRFSHSLESS---CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYE 140
           V  +   SH L S+   C   HLL   R +  +  ++  L++         L  LL    
Sbjct: 52  VPADRLLSHPLPSTAHACLAAHLLARDRLYAHSRRVLSRLVALRRPHLAASLVDLLHRAA 111

Query: 141 IC-----KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           +       A  +V D L+      G  + A   + +++      +    N+ L  L + +
Sbjct: 112 LALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR-D 170

Query: 196 EIGRF-WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             GR   +L++++ +     NV TFN+VI  LCKE +L EA SL+ RM + G  P+VV F
Sbjct: 171 RSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTF 226

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +I+   + G+L+   +L  +M          + VT+N +IN FCK GR+E A     A
Sbjct: 227 NSLIDGYGKCGELDEVEQLVEEM---RRSGCKADVVTYNALINCFCKFGRMETAYGYFAA 283

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G+  NV T++T +D + + G   EA++L  +M  RG+  N   Y   I      G 
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK---------------LHNQ 419
           ++ A+ +L +M+ + +  +  TY++L  GLC+   V +A                 L+  
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 420 VLEEHMVG--------------------DAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           ++  H +                     D   Y  LI  LC  + L  AK LL+ M   G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L P+ I Y T++D   K G +  A+ + + +     +PN++ Y ++I+GLCK  S+D A 
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 520 SLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           S     + +GL   +  Y  L++G   NG + EA  +F+EM + G++++KV Y  L++  
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G    A  L   MI  G+  D   YT  ++ F       E  E+  +M+  G++PD 
Sbjct: 584 LKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDR 643

Query: 639 QTYNAIIS 646
             YN +IS
Sbjct: 644 AVYNCLIS 651



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 224/443 (50%), Gaps = 8/443 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  T N ++  L ++     +  L  R+ +    PNV  FN++I+  C+ G+L  A  LF
Sbjct: 156 NTRTCNHILLRLARD----RSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLF 211

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M  M     LP+ VT N +I+G+ K G ++  E++   M ++G   +V TY  LI+ +
Sbjct: 212 SRMKEMG---CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  E A      M + G+M N V +++ +     EG V  A+ + + M  + +  + 
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           FTY+ L  G C+ G +  A  L ++++ + +  +  +Y +L++ LCK   +A A+ +L  
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+  + + Y TLI G+    N E A+ +   MK    + ++ +Y ++I GLC    
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD AKSLL      GL  + I Y T+++  F +GK+ EA AM  ++ + G   N + Y  
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ LCK G   +A      M   G+ P+   YT LV    KN    E ++L ++MV  G
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 634 VSPDNQTYNAIISPLLGEKSAED 656
           +S D   Y A++   L + +  D
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHD 591



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 43/428 (10%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++A+    R+ +  + PN    N I+    +        +LF ++         PN  T
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-------PNVFT 190

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +I+  CK G +  A  +   M + G   +V T+ +LIDGY + G  +E  +L +EM 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + G   + V YN+ I+                                     C+ G ++
Sbjct: 251 RSGCKADVVTYNALINCF-----------------------------------CKFGRME 275

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A+     +  E ++ +  +++  ++  CK   +  A +L + M VRG+  +  TY  LI
Sbjct: 276 TAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG CK G ++ A+ + + M +     N+V Y  +++GLCK+  +  A+ +L+  ++ G+ 
Sbjct: 336 DGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR 395

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + + Y TLI+G+F+N    +A  + SEM+N G+ ++   Y  LI  LC      +A+ L
Sbjct: 396 ANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSL 455

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M   G+ P+Y+ YTT++    K+    E I +   ++ SG  P+  TY A+I  L  
Sbjct: 456 LTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK 515

Query: 651 EKSAEDQV 658
             S ++ +
Sbjct: 516 AGSIDEAI 523



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 34/420 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CKA    ++AL+    + G  E AY     +K +G   ++  ++ F+    K   +    
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL+ +M   G   N  T+  +I   CK  +L++A+ L   M++ G+  NVV + ++++  
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 262 CQ---VGDLEFALKLFRKMGVMSGDSVLPNSVTHN------------------------- 293
           C+   V + E  L++  K GV + + +L  ++ H                          
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANE-LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 294 -----CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
                 +I G C + +++ A+ +   M ++G++ N   Y T++D   + G   EA+ +  
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +++  G  PN + Y + I  L   G ++ A+   + M D  + P+   Y+ L  GLC+NG
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           C+ +A +L N+++ + M  D   Y  L++   K  NL  A  L + MI  GL  D+  Y 
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYT 612

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             I G+C    +  A +V+  M      P+  +YN +I+   K  +L+ A SL    +R+
Sbjct: 613 CFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 3/179 (1%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           AL+    + G+ + A     K++  G   ++ A+   +  L K   +    +L+ EMV  
Sbjct: 508 ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   +   +  ++    K+  L +A +L  +M+ SG+  ++ C+   I+  C +  +  A
Sbjct: 568 GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEA 627

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
            ++F +M    G  + P+   +NC+I+ + KLG +E A  ++  M +    C     AT
Sbjct: 628 REVFSEM---IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTAT 683


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 240/440 (54%), Gaps = 2/440 (0%)

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
           C  + ++++ NL++ +L    +  +  + +  ++ +G  P+   +N ++      GDL+ 
Sbjct: 116 CSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDV 175

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL + R+MG   G +  P++ ++N +I G  + G+   A ++   M+  G+  N  TY T
Sbjct: 176 ALAMLRRMGRSEG-APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNT 234

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +IDG+ +GG  E   RL D+M+  G  PN V YN  +  L   G ++    ++ +M    
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD FTYSIL  GL R G  +    L  + L++ ++  AY+ +IL+N LCK   +A AK
Sbjct: 295 MLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAK 354

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           Q+   ++  GL+P  + Y TLI+GYC+  ++ GA  ++E MK    +P+ + YN++INGL
Sbjct: 355 QVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 510 CKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   +  A+ L+   ++ G+  ++ T+NTLI+ Y   G++ + F + S+M+  GI  + 
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           + +  ++   CK G   +A  ++  MI   + P+   Y +++  + ++   E+ + L + 
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEK 534

Query: 629 MVLSGVSPDNQTYNAIISPL 648
           M  SGVS    TYN ++  L
Sbjct: 535 MKNSGVSASIVTYNLLLKGL 554



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 250/507 (49%), Gaps = 8/507 (1%)

Query: 144 ATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA--WNNFLSHLVKLNEIGR 199
           A P  F  + +V+AC   G  + A  +++++     +    A  +N  ++ L +  +   
Sbjct: 153 ARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSD 212

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             K++ EMV  G   N  T+N +I    K   LE    L  +ML  G  PNVV +N++++
Sbjct: 213 ALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS 272

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G ++    L   M  M+  S+LP+  T++ + +G  + G  +    +    +K G
Sbjct: 273 GLCRTGRMDETRAL---MDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKG 329

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +     T + L++G  + G   +A ++ + +V  GL+P  V+YN+ I+      D+ GA 
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 389

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   M  +HI PDH TY+ L  GLC+   V +A  L  ++ +  +     ++N LI+  
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
             +  L     +LS M  +G+  D+I++G+++  +CK G I  AV + ++M   +  PN 
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
            +YNSII+   +    + A  L++  +  G+  +I TYN L+ G   + +I EA  +   
Sbjct: 510 QVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           +RN G+  + V YN +I+  C  G   +A EL++ M  +GI P   T  TLV+  +    
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGR 629

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
             ++  L+  M+   V P +  Y  ++
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMV 656



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 244/522 (46%), Gaps = 8/522 (1%)

Query: 140 EICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           E+C   P++   + L+ +   +G           L   G      AWN  +   V   ++
Sbjct: 114 EVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDL 173

Query: 198 GRFWKLYKEMVSCGYVENVNTF--NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
                + + M         + F  N+VI  L +  K  +AL ++  M+  G+ PN + +N
Sbjct: 174 DVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYN 233

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I+   + GDLE     FR    M  D   PN VT+N +++G C+ GR++    +   M
Sbjct: 234 TMIDGHVKGGDLEAG---FRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEM 290

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
               +  +  TY+ L DG  R G S+  L L  E +K+G+M      +  ++ L  +G V
Sbjct: 291 ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  V   ++   + P    Y+ L  G C+   ++ AF +  Q+   H+  D  +YN L
Sbjct: 351 AKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           IN LCK   +  A+ L+  M   G+ P + T+ TLID Y   G +E    V  +M++   
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFA 554
           K +++ + S++   CK+  +  A ++L     +    +A  YN++I+ Y  +G   +A  
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALL 530

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  +M+N G++ + V YN+L+  LC+     +A EL+  +   G+ PD V+Y T+++   
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                ++ +EL  +M   G+ P  +T + ++S L       D
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHD 632



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 193/378 (51%), Gaps = 4/378 (1%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +  E      L+ E +  G +    T ++++  LCK+ K+ +A  ++  ++ +G+ P 
Sbjct: 309 LTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPT 368

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
            V +N +IN  CQV DL  A  +F +M       + P+ +T+N +ING CKL  V  AE+
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQM---KSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M K+G+D +V T+ TLID Y   G  E+   +  +M ++G+  + + + S +    
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A+ +L DMI K + P+   Y+ +      +G  +QA  L  ++    +     
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIV 545

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN+L+  LC+S+ +  A++L+ ++  +GL PD+++Y T+I   C  G+ + A+++ + M
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKI 549
            K   +P L   +++++ L     +   + L Q      +  + + Y  +++ Y      
Sbjct: 606 NKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEND 665

Query: 550 AEAFAMFSEMRNVGIAVN 567
           ++  ++  EM   GIA +
Sbjct: 666 SKVASLKKEMSEKGIAFD 683



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 144/319 (45%), Gaps = 3/319 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T  +++ L+    Q+    GA+ + +++K +        +N  ++ L KL  + +   L 
Sbjct: 368 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            EM   G   +V TFN +I A     +LE+  ++   M + GI  +V+ F  ++   C+ 
Sbjct: 428 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 487

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G +  A+ +   M       V PN+  +N II+ + + G  E A  +   M  +G+  ++
Sbjct: 488 GKIPEAVAILDDMIY---KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASI 544

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  L+ G  R    +EA  L   +  +GL P+ V YN+ I     +GD + AL +L +
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M    I P   T   L   L   G V     L+ Q+L +++   +  Y I+++   +  N
Sbjct: 605 MNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664

Query: 445 LAAAKQLLSSMIVRGLIPD 463
            +    L   M  +G+  D
Sbjct: 665 DSKVASLKKEMSEKGIAFD 683


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 247/494 (50%), Gaps = 41/494 (8%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEG 134
           +L L F+ W  +  R S+ LE++  ++HLL N +++      +  L+     +       
Sbjct: 59  ELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHS 118

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           LL   +   A   + D LV A         A +V ++++  G  +S+++ N  LS LVK 
Sbjct: 119 LLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKG 178

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           NE G    +YKEM+      N+ TFN+ I  LCK  KL +A  +   +   G  PN+V +
Sbjct: 179 NETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTY 238

Query: 255 NMIINEACQVGDLEFALKLFRKMGV---MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           N +I+  C+ G    A K++R   +   M  + + PN +T N +I+GFCK   V  A+  
Sbjct: 239 NTLIDGHCKKGS---AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNA 295

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M + G+  N+ TY +LI+G +  G  +EA+ L D+MV  GL PN V +N+ I+    
Sbjct: 296 FEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCK 355

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +  ++ A  +  D+ ++ + P+  T++ +    C+ G +++ F LHN +L+E +  +  +
Sbjct: 356 KKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVST 415

Query: 432 YNILINYLCKSNNLAAAKQLLSSM-----------------------------------I 456
           YN LI  LC++ N+ AAK+LL+ M                                   +
Sbjct: 416 YNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML 475

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G+ P+ +TY TL+DGYC  GN++ A++V   M+K  K+ N+V YN +I G CK   L+
Sbjct: 476 NVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLE 535

Query: 517 AAKSLLQASQRIGL 530
            A  LL      GL
Sbjct: 536 DANRLLNEMLEKGL 549



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 193/393 (49%), Gaps = 7/393 (1%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+  L+  N    ++++   +    I +     F+  +    + G    A DVI+ +K  
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRI-QPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAW 229

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWK---LYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           G S +I  +N  +    K    G+ ++   + KEM++     N  TFN +I   CK+  +
Sbjct: 230 GFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENV 289

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
             A + +  M + G+ PN+V +N +IN     G L+ A+ L+ KM    G  + PN VT 
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM---VGLGLKPNIVTF 346

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +INGFCK   ++ A ++   + +  +  N  T+ T+ID + + G  EE   L + M+ 
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLD 406

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ PN   YN  I  L    +V  A  +L++M +  +  D  TY+IL  G C++G   +
Sbjct: 407 EGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSK 466

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A KL  ++L   +  +  +YN L++  C   NL AA ++ + M   G   +++TY  LI 
Sbjct: 467 AEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIK 526

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           G+CK G +E A ++   M +    PN   Y+ +
Sbjct: 527 GFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 189/372 (50%), Gaps = 4/372 (1%)

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           ++ GD    N++  + ++  +     +  A E+   +   G   ++ +   L+    +G 
Sbjct: 120 LLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGN 179

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            + E   +  EM+KR + PN   +N  I+ L   G +  A  V+ D+      P+  TY+
Sbjct: 180 ETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYN 239

Query: 399 ILTKGLCRNGCVKQAFK---LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            L  G C+ G   + ++   +  ++L   +  +  ++N LI+  CK  N+ AAK     M
Sbjct: 240 TLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEM 299

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
             +GL P+I+TY +LI+G    G ++ A+ +++ M  +  KPN+V +N++ING CK   +
Sbjct: 300 QRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMI 359

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
             A+ L        L+ +AIT+NT+I+ +   G + E FA+ + M + GI  N   YN L
Sbjct: 360 KEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCL 419

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I  LC+    + A++L+  M  + +  D VTY  L+  + K+  P +  +L  +M+  GV
Sbjct: 420 IAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGV 479

Query: 635 SPDNQTYNAIIS 646
            P++ TYN ++ 
Sbjct: 480 KPNHVTYNTLMD 491



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 208/430 (48%), Gaps = 17/430 (3%)

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEA---CQVGDLEF--ALKLFRKMGVMSGDSVLPNSVT 291
           S+++ +L  G  P   C N +I +      V +LE   A ++FR++    G  +  NS  
Sbjct: 114 SVFHSLLLGGDRP---CANALITDMLVLAYVTNLEIHSACEVFRRVQDY-GFKLSLNSC- 168

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +++   K       + +   MIK  I  N+ T+   I+G  + G   +A  + +++ 
Sbjct: 169 -NPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIK 227

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALF----VLSDMIDKHICPDHFTYSILTKGLCRN 407
             G  PN V YN+ I     +G   G ++    +L +M+   ICP+  T++ L  G C++
Sbjct: 228 AWGFSPNIVTYNTLIDGHCKKGSA-GKMYRADAILKEMLANKICPNEITFNTLIDGFCKD 286

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             V  A     ++  + +  +  +YN LIN L  +  L  A  L   M+  GL P+I+T+
Sbjct: 287 ENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTF 346

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI+G+CK   I+ A ++++++ + +  PN + +N++I+  CK   ++   +L  +   
Sbjct: 347 NALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLD 406

Query: 528 IGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+   + TYN LI G   N  +  A  + +EM N  +  + V YNILI   CK G   +
Sbjct: 407 EGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSK 466

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +L+  M+  G+ P++VTY TL+  +    + +  +++   M   G   +  TYN +I 
Sbjct: 467 AEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIK 526

Query: 647 PLLGEKSAED 656
                   ED
Sbjct: 527 GFCKTGKLED 536



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 3/268 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     +++L+   +  G  + A  +  K+   G   +I  +N  ++   K   I    K
Sbjct: 305 KPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARK 364

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ ++     V N  TFN +I A CK   +EE  +L+  ML  GI+PNV  +N +I   C
Sbjct: 365 LFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLC 424

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +  ++  A KL  +M       +  + VT+N +I G+CK G    AE++   M+  G+  
Sbjct: 425 RNQNVRAAKKLLNEM---ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY TL+DGY   G+ + AL++  +M K G   N V YN  I      G +E A  +L
Sbjct: 482 NHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLL 541

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCV 410
           ++M++K + P+  TY ++   +   G +
Sbjct: 542 NEMLEKGLNPNRTTYDVVRLEMLEKGFI 569



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 10/234 (4%)

Query: 424 HMVGDAYSYNILINYLCK--SNNLAAAKQLLSSMIVRGLIP--DIITYGTLIDGYCKGGN 479
           H++ ++  Y+ + ++L K   N       +  S+++ G  P  + +    L+  Y     
Sbjct: 86  HLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLE 145

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYN 537
           I  A +V+  ++    K +L   N +++ L K       + + +    +RI   +  T+N
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQP-NLTTFN 204

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC---YQQARELMKVM 594
             ING    GK+ +A  +  +++  G + N V YN LI+  CK G      +A  ++K M
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + + I P+ +T+ TL+  F K+ +        ++M   G+ P+  TYN++I+ L
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGL 318


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 241/471 (51%), Gaps = 4/471 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A  +  ++K  G    +  +N+ +    K  E+    +L +EM   G   +V T+
Sbjct: 202 GELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTY 261

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I   CK  ++E A   +  M + G+  NVV F+  ++  C+ G +  A+KLF +M V
Sbjct: 262 NALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRV 321

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                +  N  T+ C+I+G CK GR++ A  +   M++ G+  NV TY  L+DG  +   
Sbjct: 322 RG---MALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERK 378

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  +   M K G+  N ++Y + IH  F   + E AL +LS+M +K +  D   Y  
Sbjct: 379 VAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGA 438

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L +GLC    + +A  L  ++ E  +  +   Y  +++   KS  +  A  +L  ++  G
Sbjct: 439 LIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSG 498

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P++ITY  LIDG CK G+I+ A+  +  M+ +   PN+  Y ++++GLCK+  L+ A 
Sbjct: 499 FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAV 558

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L       G+ LD + Y  L++GY   G + +AFA+ ++M + G+ ++   Y   I+  
Sbjct: 559 QLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGF 618

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           C      +ARE+   MI HGI PD   Y  L++++ K  + EE I L D+M
Sbjct: 619 CNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 171/608 (28%), Positives = 282/608 (46%), Gaps = 53/608 (8%)

Query: 84  VGENNRFSHSLESS---CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYE 140
           V  +   SH L S+   C   HLL   R +  +  ++  L++         L  LL    
Sbjct: 52  VPADRLLSHPLPSTAHACLAAHLLARDRLYAHSRRVLSRLVALRRPHLAASLVDLLHRAA 111

Query: 141 IC-----KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           +       A  +V D L+      G  + A   + +++      +    N+ L  L + +
Sbjct: 112 LALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR-D 170

Query: 196 EIGRF-WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             GR   +L++++ +     NV TFN+VI  LCKE +L EA SL+ RM + G  P+VV F
Sbjct: 171 RSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTF 226

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +I+   + G+L+   +L  +M          + VT+N +IN FCK GR+E A     A
Sbjct: 227 NSLIDGYGKCGELDEVEQLVEEM---RRSGCKADVVTYNALINCFCKFGRMETAYGYFAA 283

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G+  NV T++T +D + + G   EA++L  +M  RG+  N   Y   I      G 
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK---------------LHNQ 419
           ++ A+ +L +M+ + +  +  TY++L  GLC+   V +A                 L+  
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 420 VLEEHMVG--------------------DAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           ++  H +                     D   Y  LI  LC  + L  AK LL+ M   G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L P+ I Y T++D   K G +  A+ + + +     +PN++ Y ++I+GLCK  S+D A 
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 520 SLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           S     + +GL   +  Y  L++G   NG + EA  +F+EM + G++++KV Y  L++  
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G    A  L   MI  G+  D   YT  ++ F       E  E+  +M+  G++PD 
Sbjct: 584 LKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDR 643

Query: 639 QTYNAIIS 646
             YN +IS
Sbjct: 644 AVYNCLIS 651



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 224/443 (50%), Gaps = 8/443 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  T N ++  L ++     +  L  R+ +    PNV  FN++I+  C+ G+L  A  LF
Sbjct: 156 NTRTCNHILLRLARD----RSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLF 211

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M  M     LP+ VT N +I+G+ K G ++  E++   M ++G   +V TY  LI+ +
Sbjct: 212 SRMKEMG---CLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  E A      M + G+M N V +++ +     EG V  A+ + + M  + +  + 
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           FTY+ L  G C+ G +  A  L ++++ + +  +  +Y +L++ LCK   +A A+ +L  
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+  + + Y TLI G+    N E A+ +   MK    + ++ +Y ++I GLC    
Sbjct: 389 MEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHK 448

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD AKSLL      GL  + I Y T+++  F +GK+ EA AM  ++ + G   N + Y  
Sbjct: 449 LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCA 508

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ LCK G   +A      M   G+ P+   YT LV    KN    E ++L ++MV  G
Sbjct: 509 LIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKG 568

Query: 634 VSPDNQTYNAIISPLLGEKSAED 656
           +S D   Y A++   L + +  D
Sbjct: 569 MSLDKVVYTALLDGYLKQGNLHD 591



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 200/428 (46%), Gaps = 43/428 (10%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++A+    R+ +  + PN    N I+    +        +LF ++         PN  T
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-------PNVFT 190

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +I+  CK G +  A  +   M + G   +V T+ +LIDGY + G  +E  +L +EM 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + G   + V YN+ I+                                     C+ G ++
Sbjct: 251 RSGCKADVVTYNALINCF-----------------------------------CKFGRME 275

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A+     +  E ++ +  +++  ++  CK   +  A +L + M VRG+  +  TY  LI
Sbjct: 276 TAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG CK G ++ A+ + + M +     N+V Y  +++GLCK+  +  A+ +L+  ++ G+ 
Sbjct: 336 DGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR 395

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + + Y TLI+G+F+N    +A  + SEM+N G+ ++   Y  LI  LC      +A+ L
Sbjct: 396 ANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSL 455

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M   G+ P+Y+ YTT++    K+    E I +   ++ SG  P+  TY A+I  L  
Sbjct: 456 LTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK 515

Query: 651 EKSAEDQV 658
             S ++ +
Sbjct: 516 AGSIDEAI 523



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 34/420 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CKA    ++AL+    + G  E AY     +K +G   ++  ++ F+    K   +    
Sbjct: 254 CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAM 313

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL+ +M   G   N  T+  +I   CK  +L++A+ L   M++ G+  NVV + ++++  
Sbjct: 314 KLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGL 373

Query: 262 CQ---VGDLEFALKLFRKMGVMSGDSVLPNSVTHN------------------------- 293
           C+   V + E  L++  K GV + + +L  ++ H                          
Sbjct: 374 CKERKVAEAEDVLRMMEKAGVRANE-LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELD 432

Query: 294 -----CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
                 +I G C + +++ A+ +   M ++G++ N   Y T++D   + G   EA+ +  
Sbjct: 433 ISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQ 492

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +++  G  PN + Y + I  L   G ++ A+   + M D  + P+   Y+ L  GLC+NG
Sbjct: 493 KILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNG 552

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           C+ +A +L N+++ + M  D   Y  L++   K  NL  A  L + MI  GL  D+  Y 
Sbjct: 553 CLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYT 612

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             I G+C    +  A +V+  M      P+  +YN +I+   K  +L+ A SL    +R+
Sbjct: 613 CFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 3/179 (1%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           AL+    + G+ + A     K++  G   ++ A+   +  L K   +    +L+ EMV  
Sbjct: 508 ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK 567

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   +   +  ++    K+  L +A +L  +M+ SG+  ++ C+   I+  C +  +  A
Sbjct: 568 GMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEA 627

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
            ++F +M    G  + P+   +NC+I+ + KLG +E A  ++  M +    C     AT
Sbjct: 628 REVFSEM---IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERVLPSCTDSDTAT 683


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/617 (26%), Positives = 307/617 (49%), Gaps = 37/617 (5%)

Query: 63  VNRVVSEF-RKSPKLALEFYTWVGEN--NRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           +NR +++  R SP  A+  Y  +     +  +  L +   ++       R D     +GN
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 120 LMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG--AYDVIQKL- 172
           ++      ++++    L+GL       K T    D ++R  T++G      +Y+++ K  
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCAD----KRTSDAMDIVLRRMTELGCIPNVFSYNILLKGL 168

Query: 173 -------------------KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                              +  G    + ++   ++   K  +  + +  Y EM+  G +
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGIL 228

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V T+N +I ALCK   +++A+ +   M+K+G+ P+ + +N I++  C  G  + A+  
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            +KM     D V P+ VT++ +++  CK GR   A +I  +M K G+   + TY TL+ G
Sbjct: 289 LKKM---RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           YA  G+  E   L D MV+ G+ P++ V++  I     +G V+ A+ V S M  + + P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY  +   LC++G V+ A     Q+++E +      YN LI+ LC  N    A++L+ 
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+ RG+  + I + ++ID +CK G +  + +++E M ++  KPN++ YN++ING C   
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  LL     +GL  + +TY+TLINGY    ++ +A  +F EM + G++ + + YN
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           I++  L +      A+EL   +   G   +  TY  ++    KN   ++ +++  ++ L 
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645

Query: 633 GVSPDNQTYNAIISPLL 649
            +  + +T+N +I  LL
Sbjct: 646 DLKLEARTFNIMIDALL 662



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 201/419 (47%), Gaps = 4/419 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  +   +  +G    I  +   L        +     L   MV  G   +   F+++I 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A  K+ K+++A+ ++ +M + G+ PN V +  +I   C+ G +E A+  F +M     + 
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM---IDEG 436

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P ++ +N +I+G C   + E AEE+   M+  GI  N   + ++ID + + G   E+ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L + MV+ G+ PN + YN+ I+     G ++ A+ +LS M+   + P+  TYS L  G 
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   ++ A  L  ++    +  D  +YNI++  L ++   AAAK+L   +   G   ++
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY  ++ G CK    + A+Q+++N+  ++ K     +N +I+ L K    D AK L  A
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
               GL+ +  TY  +       G + E   +F  M + G  V+    N ++  L + G
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 8/352 (2%)

Query: 315 MIKAGID---CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
           M +AG D    ++ TY  LI    R G  +        ++K+G   + + +   +  L A
Sbjct: 75  MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134

Query: 372 EGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG--- 427
           +     A+  VL  M +    P+ F+Y+IL KGLC     ++A +L + + ++   G   
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  SY  +IN   K  +   A      M+ RG++PD++TY ++I   CK   ++ A++V 
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
             M K    P+ + YNSI++G C       A   L+  +  G+  D +TY+ L++    N
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G+  EA  +F  M   G+      Y  L+      G   +   L+ +M+ +GI PD+  +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + L+  ++K    ++ + +   M   G++P+  TY A+I  L      ED +
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 3/344 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+ A  + G  + A  V  K++ +G + +   +   +  L K   +      +++M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G       +N +I+ LC   K E A  L   ML  GI  N + FN II+  C+ G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V PN +T+N +ING+C  G+++ A ++   M+  G+  N  TY
Sbjct: 493 IESEKLFE---LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +TLI+GY +    E+AL L  EM   G+ P+ + YN  +  LF       A  +   + +
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N     A ++   +    +  +A ++NI+I+ L K      
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           AK L  +    GL+P+  TY  + +     G +E   Q++ +M+
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 160/355 (45%), Gaps = 20/355 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++ +L    R +DA+L               + E ++D  E       V+++L+     
Sbjct: 411 AVIGILCKSGRVEDAML---------------YFEQMID--EGLSPGNIVYNSLIHGLCT 453

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
               E A ++I ++  +G  ++   +N+ +    K   +    KL++ MV  G   NV T
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I   C   K++EA+ L   M+  G+ PN V ++ +IN  C++  +E AL LF++  
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE-- 571

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M    V P+ +T+N I+ G  +  R   A+E+   + ++G    + TY  ++ G  +  
Sbjct: 572 -MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +++AL++   +    L      +N  I  L   G  + A  +        + P+++TY 
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           ++ + +   G +++  +L   + +     D+   N ++  L +   +  A   LS
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 186/701 (26%), Positives = 305/701 (43%), Gaps = 99/701 (14%)

Query: 17  SRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRK-SPK 75
           SRA++   Q +    E  ++  + ++    +W+ L  MA  L          + R    +
Sbjct: 46  SRAWNT-TQTSGSDVESSIYTILTID----RWESLNHMAYGL---------KQLRPVHGR 91

Query: 76  LALEFYTWVGENN--RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE 133
           LAL+F  WV +       H     C   H+LV  R +D A  ++ +L     +       
Sbjct: 92  LALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQM-GIGSKSIFG 150

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            L+D+Y +C + P+VFD L+R   + G  + A +  + + + G   S++  N  L+ +VK
Sbjct: 151 ALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVK 210

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
                  W L++EM   G   NV TFN++I  LC E  L++A +L  +M ++G  P +V 
Sbjct: 211 DKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVT 270

Query: 254 FNMIINEACQVGDLEFALKLFRKM---GV-----------------------------MS 281
           +N ++N  C+ G  + A++L   M   G+                             M 
Sbjct: 271 YNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMR 330

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
            + + PN VT+N +INGF K G++  A ++   M K  +  N  TY  LI G+   G  E
Sbjct: 331 KEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFE 390

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EALRL D M   GL  N              G+V  A+ V + M       DHFT ++L 
Sbjct: 391 EALRLLDHMEAAGLRLNE------------HGNVTEAMKVYAVMNCNGHGADHFTCNVLV 438

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN------------------------ 437
             LCR+G + +A K    +    +V ++ +Y+ +IN                        
Sbjct: 439 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH 498

Query: 438 -----------YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
                       LCK  NL  AK+ L+ +       D + Y TL+   CK GN+  AV +
Sbjct: 499 PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVAL 558

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYF 544
           ++ M +    P+   Y+S++ GLC+      A  L   +   G L  + + Y  L++G  
Sbjct: 559 FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 618

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G    AF  F EM   G   + V +N +I+   + G   +A +    M   G+ P+  
Sbjct: 619 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 678

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           TY  L+  FSK  +    + L+  M+  G+ PD  T++++I
Sbjct: 679 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 719



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 137/551 (24%), Positives = 245/551 (44%), Gaps = 40/551 (7%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++ L+    + G  + A ++I  +  KG    +  +N F+ +L   +   + + L 
Sbjct: 267 TIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLL 326

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           K+M       N  T+N +I    KE K+  A  ++  M K  + PN V +N +I   C V
Sbjct: 327 KKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHV 386

Query: 265 GDLEFALKLFRKM--------------------GVMSGDSVLPNSVTHNCIINGFCKLGR 304
           GD E AL+L   M                     VM+ +    +  T N +++  C+ G+
Sbjct: 387 GDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 446

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  AE+    M + G+  N  TY  +I+GY   G    A    D+M+K G  P+   Y S
Sbjct: 447 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 506

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICP---DHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
            +  L   G++  A   L+ +   H  P   D   Y+ L    C++G + +A  L ++++
Sbjct: 507 LLKGLCKGGNLVEAKKFLNRL---HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 563

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG-LIPDIITYGTLIDGYCKGGNI 480
           + +++ D+Y+Y+ L+  LC+      A  L  + + RG L P+ + Y  L+DG  K G+ 
Sbjct: 564 QNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHP 623

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTL 539
           + A   +E M K    P+ V +N+II+   +   +  A       +  G+   + TYN L
Sbjct: 624 KAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNIL 683

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL--- 596
           ++G+     +    +++S M   GI  +K+ ++ LI  L K G      +L+  MI+   
Sbjct: 684 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEES 743

Query: 597 ---------HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
                    +G+IP +  Y TL+    +    +   +L D+M   G        +A++  
Sbjct: 744 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRG 803

Query: 648 LLGEKSAEDQV 658
           LL     ED +
Sbjct: 804 LLHCGKTEDAM 814



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 208/428 (48%), Gaps = 17/428 (3%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           +  + +M+ CG   +  T+  ++  LCK   L EA     R+       + V +N ++ E
Sbjct: 486 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 545

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI-RYAMIKAG 319
            C+ G+L  A+ LF KM     ++VLP+S T++ ++ G C+ G+   A  +   AM +  
Sbjct: 546 TCKSGNLHEAVALFDKM---VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGT 602

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N   Y  L+DG ++ G  + A    +EM+K+G  P+ V +N+ I      G +  A 
Sbjct: 603 LFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAN 662

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
              S M    +CP+  TY+IL  G  +   + +   L++ ++ E +  D  +++ LI  L
Sbjct: 663 DFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 722

Query: 440 CKSNNLAAAKQLLSSMIVR------------GLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
            KS       +LL  MI+             G+IP    Y TLI+G C+ G+I+GA ++ 
Sbjct: 723 SKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLK 782

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFIN 546
           + M+ +    + V  ++++ GL      + A  +L    R+ LL  I T+ TL++ +  +
Sbjct: 783 DEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRD 842

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            KIAEA  +   M   G+ ++ V YN+LI  +C  G    A EL + M    + P+  TY
Sbjct: 843 AKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTY 902

Query: 607 TTLVTRFS 614
             LV   S
Sbjct: 903 AVLVDAIS 910



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 239/517 (46%), Gaps = 39/517 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF---WKLY 204
            ++AL+     +G  E A  ++  ++  G               ++LNE G      K+Y
Sbjct: 375 TYNALIGGHCHVGDFEEALRLLDHMEAAG---------------LRLNEHGNVTEAMKVY 419

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             M   G+  +  T N+++ +LC++ KL EA      M + G+ PN + ++ IIN    +
Sbjct: 420 AVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSI 479

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI--RYAMIKAGIDC 322
           GD   A   F  M +  G    P+  T+  ++ G CK G +  A++   R   I   +D 
Sbjct: 480 GDPLNAFSFFDDM-IKCGQH--PSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 536

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            +  Y TL+    + G+  EA+ L D+MV+  ++P++  Y+S +  L  +G    A+ + 
Sbjct: 537 VM--YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 594

Query: 383 SDMIDK-HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              + +  + P+H  Y+ L  GL + G  K AF    +++++    D  ++N +I+   +
Sbjct: 595 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 654

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A    S+M   G+ P++ TY  L+ G+ K   +   + +Y  M +    P+ + 
Sbjct: 655 RGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 714

Query: 502 YNSIINGLCKDASLDAA-----KSLLQASQRI-------GLLDA-ITYNTLINGYFINGK 548
           ++S+I GL K    D       K +++ S  +       G++     Y TLING    G 
Sbjct: 715 FHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 774

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I  AF +  EM  +G   ++V  + ++  L   G  + A  ++  M+   ++P   T+TT
Sbjct: 775 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 834

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           L+ RF ++    E ++L   M L G+  D   YN +I
Sbjct: 835 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 871



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 181/394 (45%), Gaps = 18/394 (4%)

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV--THNCIINGFCKLGRVEFAEEIRYA 314
           I+   CQ+G    ++      G +     L NS+    + +I  + K G +++A E    
Sbjct: 134 ILRHLCQMGIGSKSI-----FGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFEL 188

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +   G   +V T   ++    +   +E    L  EM  +G+ PN   +N  I+ L  EG+
Sbjct: 189 VGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGN 248

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  +L  M +    P   TY+ L    C+ G  K A +L + ++ + +  D  +YN+
Sbjct: 249 LKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNV 308

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
            I+ LC ++  A A  LL  M    + P+ +TY TLI+G+ K G I  A QV+  M K +
Sbjct: 309 FIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFD 368

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
             PN V YN++I G C     + A  LL   +  GL         +N +   G + EA  
Sbjct: 369 LSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL--------RLNEH---GNVTEAMK 417

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +++ M   G   +    N+L++ LC+ G   +A + +  M   G++P+ +TY  ++  + 
Sbjct: 418 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 477

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               P       DDM+  G  P   TY +++  L
Sbjct: 478 SIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 511



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/440 (22%), Positives = 189/440 (42%), Gaps = 53/440 (12%)

Query: 142 CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C   P+ F   +L++   + G    A   + +L     +V    +N  L+   K   +  
Sbjct: 495 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 554

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMII 258
              L+ +MV    + +  T++ ++  LC++ K   A+ L+   +  G ++PN V +  ++
Sbjct: 555 AVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 614

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +   + G  + A   F +M         P++V  N II+   + G++  A +    M   
Sbjct: 615 DGLSKAGHPKAAFYFFEEM---MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWW 671

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD---- 374
           G+  N+ TY  L+ G+++  +    L L   M++ G+ P+ + ++S I  L   G     
Sbjct: 672 GVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLG 731

Query: 375 --------VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ------- 419
                   +E +  VL +M++  + P H  Y  L  G+CR G ++ AFKL ++       
Sbjct: 732 VKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 791

Query: 420 ---VLEEHMVG---------DAY----------------SYNILINYLCKSNNLAAAKQL 451
              V E  MV          DA                 ++  L++  C+   +A A +L
Sbjct: 792 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 851

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M + GL  D++ Y  LI G C  G+   A ++YE M+  +  PN+  Y  +++ +  
Sbjct: 852 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 911

Query: 512 DASLDAAKSLLQASQRIGLL 531
             +L   + LL   Q  GL+
Sbjct: 912 ANNLIQGEKLLTDLQERGLI 931



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 3/192 (1%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           IP +  +  LI  Y K G I+ AV+ +E +  V  KP++   N I+  + KD   +   S
Sbjct: 162 IPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 219

Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L +     G+   + T+N LING  + G + +A  +  +M   G     V YN L+N+ C
Sbjct: 220 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G Y+ A EL+  MI  GI  D  TY   +     N    +   L   M    +SP+  
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339

Query: 640 TYNAIISPLLGE 651
           TYN +I+  + E
Sbjct: 340 TYNTLINGFVKE 351


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 266/520 (51%), Gaps = 7/520 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRF 200
           C+     F  L+ +  +    + A  V+  ++ + G  +    +N  L+ LV  N++   
Sbjct: 136 CEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLV 195

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             +   MVS G   +V TFN++I ALC+  ++  A+ +   M   G+ P+   F  ++  
Sbjct: 196 EIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQG 255

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNS-VTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             + G++  AL++  +M V +G    P+S VT N +++G+CK GR+E        M   G
Sbjct: 256 FIEEGNMNGALRIREQM-VAAG---CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG 311

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              +  T+ +L++G  R G  + AL + D M++ G  P+   YNS I  L   G+VE A+
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAV 371

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L+ MI +   P+  TY+ L   LC+   V++A +L   +  + ++ D  ++N LI  L
Sbjct: 372 EILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 431

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C +NN   A +L   M  +G  PD  TY  LID  C  G +E A+ + + M+      N+
Sbjct: 432 CLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNV 491

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN++I+G CK+  ++ A+ +    +  G+  + +TYNTLI+G   N ++ EA  +  +
Sbjct: 492 VTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQ 551

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G+  +K  YN L+ + C+ G  ++A ++++ M  +G  PD VTY TL+   SK   
Sbjct: 552 MLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGR 611

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            E    L   + L G+    QTYN +I  L  EK   + V
Sbjct: 612 VELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 240/482 (49%), Gaps = 4/482 (0%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           V  ++  +G    +  +N  +  L + ++I     + +EM S G   +  TF  ++    
Sbjct: 198 VNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFI 257

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           +E  +  AL +  +M+ +G   + V  N++++  C+ G +E  L    +M   S +   P
Sbjct: 258 EEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEM---SNEGFRP 314

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T N ++NG C++G V+ A EI   M++ G D ++ TY +LI G  + G  EEA+ + 
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           ++M+ R   PN V YN+ I  L  E  VE A  +   +  K I PD  T++ L +GLC  
Sbjct: 375 NQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 434

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
              + A +L  ++  +    D ++YN+LI+ LC    L  A  LL  M   G   +++TY
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK   IE A ++++ M+      N+V YN++I+GLCK+  ++ A  L+     
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLM 554

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TYN+L+  +   G I +A  +   M + G   + V Y  LI  L K G  + 
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVEL 614

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  L++ + L G++    TY  ++    +     E + L  +M+  G  PD  TY  +  
Sbjct: 615 ASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFR 674

Query: 647 PL 648
            L
Sbjct: 675 GL 676



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 191/382 (50%), Gaps = 7/382 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+    ++G  E A +++ ++ ++  S +   +N  +S L K N++    +L + +
Sbjct: 353 TYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVL 412

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G + +V TFN +I  LC       A+ L+  M   G  P+   +NM+I+  C  G L
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRL 472

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL L ++M   SG S   N VT+N +I+GFCK  R+E AEEI   M   GI  NV TY
Sbjct: 473 EEALSLLKEMES-SGCSR--NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG  +    EEA +L D+M+  GL P+   YNS + +    GD++ A  ++  M  
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  TY  L  GL + G V+ A +L   V  + MV    +YN +I  L +    + 
Sbjct: 590 NGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG-AVQVYENMKKVEKKPNLVIYNSII 506
           A +L   M+ +G  PD +TY  +  G C GG   G AV     M      P+   +  + 
Sbjct: 650 AVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLA 709

Query: 507 NGLCKDASLDAAKSLLQASQRI 528
            GLC   +L    +L++   R+
Sbjct: 710 EGLC---ALSMEDTLIKLVNRV 728



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 192/443 (43%), Gaps = 72/443 (16%)

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +P+SV +  ++    K G       +   M   G +    T+  LI+ YA+    +EA+ 
Sbjct: 102 VPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVA 161

Query: 346 LCD------------------------------------EMVKRGLMPNNVVYNSTIHWL 369
           + D                                     MV RG+ P+   +N  I  L
Sbjct: 162 VVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221

Query: 370 -----------------------------------FAEGDVEGALFVLSDMIDKHICPDH 394
                                                EG++ GAL +   M+       +
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            T ++L  G C+ G +++     +++  E    D +++N L+N LC+  ++  A ++L  
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G  PDI TY +LI G CK G +E AV++   M   +  PN V YN++I+ LCK+  
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           ++ A  L +     G+L D  T+N+LI G  +      A  +F EM+  G   ++  YN+
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ LC  G  ++A  L+K M   G   + VTY TL+  F KN   EE  E+ D+M L G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 634 VSPDNQTYNAIISPLLGEKSAED 656
           +S +  TYN +I  L   +  E+
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEE 544



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 4/289 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+ +    G  E A  ++++++  G S ++  +N  +    K   I    
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +++ EM   G   NV T+N +I  LCK  ++EEA  L  +ML  G+ P+   +N ++   
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ GD++ A  + +    M+ +   P+SVT+  +I G  K GRVE A  +   +   G+ 
Sbjct: 572 CRAGDIKKAADIVQ---TMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG-ALF 380
              +TY  +I    R   + EA+RL  EM+++G  P+ V Y      L + G   G A+ 
Sbjct: 629 LAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVD 688

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
            L +M DK   PD  ++ +L +GLC         KL N+V+++    D+
Sbjct: 689 FLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDS 737



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 6/168 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+   ++ G  E A  +++ +++KG  ++   +N  +  L +        
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCK-ECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           +L++EM+  G   +  T+ +V   LC     + EA+     M   G  P+   F M+   
Sbjct: 652 RLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEG 711

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
            C +   +  +KL  +  VM   +   + V+   +I GF K+ + + A
Sbjct: 712 LCALSMEDTLIKLVNR--VMKQANFSDSEVS---MIMGFLKIRKFQDA 754


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 176/630 (27%), Positives = 300/630 (47%), Gaps = 75/630 (11%)

Query: 67  VSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD--DALLLMGNLMSAN 124
           V +++K P  AL  +  V + + F H+  +   ++  L     FD  + +L+   L   N
Sbjct: 13  VLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDN 72

Query: 125 SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           S+     LEG             V+ + +R   + G  + A DV +++       SI ++
Sbjct: 73  SL-----LEG-------------VYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSY 114

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE--------------- 229
           N  ++ LV+     +  K+Y  M   G   +V TF + I + C+                
Sbjct: 115 NAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPS 174

Query: 230 --CKLE------------------EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
             C+L                   EA  L+ +ML+ GI+P++  FN +++  C+ G L+ 
Sbjct: 175 QGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQE 234

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG-------RVEFAEEIRYAMIKAGIDC 322
             KL  K+     + V PN  T N  I G C+ G       +V  AE   + M+  G++ 
Sbjct: 235 GEKLLNKV---LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEP 291

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY T+I GY++ G  ++A R+  +   +G +P+   Y S I  +  +GD++ AL + 
Sbjct: 292 DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALF 351

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            + + K + P    Y+ L KGL + G V +A +L N + +E M  D ++YN++IN LCK 
Sbjct: 352 EEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKM 411

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             ++ A  LL++ I +G +PDI T+ TLIDGYCK   ++ A+ + ++M      P+++ Y
Sbjct: 412 GCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITY 471

Query: 503 NSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NSI+NGLCK A   D  ++     ++  L + ITYN LI       K+ EA  +  E+RN
Sbjct: 472 NSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRN 531

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVM-----ILHGIIPDYVTYTTLVTRFSKN 616
            G+  + V +  +I+  C  G   +A +L + M     I H +     TY  ++  FS+ 
Sbjct: 532 RGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTV----ATYNIMINAFSEK 587

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              +   +L  +M   G  PD+ TY  +I 
Sbjct: 588 LDMDMAQKLFHEMGDKGCDPDSYTYRVMID 617



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 239/495 (48%), Gaps = 46/495 (9%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++L+ +M+  G   ++ TFN +++ LCK+  L+E   L  ++LK+G+ PN+  FN+ I  
Sbjct: 201 YELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQG 260

Query: 261 ACQVGDLEFA----LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
            C+ G LE A    ++    +  M    + P+  T+N II G+ K+G+++ A  I     
Sbjct: 261 LCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAK 320

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G   +  TY +LI G  + G  + AL L +E + +GL P+ V+YN+ I  L  +G V 
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVL 380

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL +++DM  + + PD +TY+++  GLC+ GCV  A  L N  + +  + D +++N LI
Sbjct: 381 KALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLI 440

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +  CK   +  A  +L SM   G+ PD+ITY ++++G CK    E  ++ ++ + +    
Sbjct: 441 DGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCL 500

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI--------------------- 534
           PN++ YN +I  LCK   +  A  LL+  +  GL+ D +                     
Sbjct: 501 PNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQL 560

Query: 535 ---------------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                          TYN +IN +     +  A  +F EM + G   +   Y ++I+  C
Sbjct: 561 FRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFC 620

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G      + +   I  G +P   T+  ++          E + +   MV +GV P+  
Sbjct: 621 KVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPE-- 678

Query: 640 TYNAIISPLLGEKSA 654
              A+++    +K A
Sbjct: 679 ---AVVTIFDADKKA 690



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 202/400 (50%), Gaps = 11/400 (2%)

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G ++ A+ +F +M   + +   P+  ++N I+N   + G    A ++   M   GI  +V
Sbjct: 90  GKVQEAVDVFERMDFYNCE---PSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDV 146

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T+   I  + R      ALRL + M  +G   N VVY + I   + E     A  + + 
Sbjct: 147 CTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNK 206

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK--- 441
           M+   I P   T++ L   LC+ G +++  KL N+VL+  +  + +++NI I  LC+   
Sbjct: 207 MLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGV 266

Query: 442 ----SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
               ++ +  A+  L  M+ +GL PD  TY T+I GY K G I+ A ++ ++ K     P
Sbjct: 267 LEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVP 326

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMF 556
           +   Y S+I G+C+D  +D A +L + +   GL  +I  YNTLI G    G + +A  + 
Sbjct: 327 DEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLM 386

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           ++M   G++ +   YN++IN LCK GC   A  L+   I  G +PD  T+ TL+  + K 
Sbjct: 387 NDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKR 446

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              +  I + D M   GV+PD  TYN+I++ L      ED
Sbjct: 447 LKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 213/433 (49%), Gaps = 19/433 (4%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ K++EA+ ++ RM      P++  +N I+N   + G    A K++ +M     + + P
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRM---KHEGIAP 144

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T    I  FC+  R   A  +   M   G + N   Y T+I G+       EA  L 
Sbjct: 145 DVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELF 204

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           ++M++ G+ P+   +N  +H L  +G ++    +L+ ++   +CP+ FT++I  +GLCR 
Sbjct: 205 NKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRK 264

Query: 408 GCVKQA-----------FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           G ++ A            K+ N+ LE     D ++YN +I    K   +  A ++L    
Sbjct: 265 GVLEGANSKVVEAENYLHKMVNKGLEP----DDFTYNTIIYGYSKVGKIQDASRILKDAK 320

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            +G +PD  TY +LI G C+ G+I+ A+ ++E       KP++V+YN++I GL +   + 
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVL 380

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  L+    + G+  D  TYN +ING    G +++A  + +     G   +   +N LI
Sbjct: 381 KALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLI 440

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           +  CK      A  ++  M  HG+ PD +TY +++    K   PE+V+E    ++  G  
Sbjct: 441 DGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCL 500

Query: 636 PDNQTYNAIISPL 648
           P+  TYN +I  L
Sbjct: 501 PNIITYNILIESL 513



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 223/484 (46%), Gaps = 47/484 (9%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           AY++  K+   G    I  +N  +  L K   +    KL  +++  G   N+ TFN+ I 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 225 ALCKECKLE-------EALSLYYRMLKSGIWPNVVCFNMII------------------- 258
            LC++  LE       EA +  ++M+  G+ P+   +N II                   
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319

Query: 259 -------NE---------ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
                  +E          CQ GD++ AL LF +     G  + P+ V +N +I G  + 
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEA---LGKGLKPSIVLYNTLIKGLSQQ 376

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G V  A ++   M K G+  ++ TY  +I+G  + G   +A  L +  + +G +P+   +
Sbjct: 377 GLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTF 436

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ I        ++ A+ +L  M    + PD  TY+ +  GLC+    +   +    ++E
Sbjct: 437 NTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           +  + +  +YNILI  LCK+  +  A  LL  +  RGLIPD +++GT+I G+C  G+++ 
Sbjct: 497 KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDE 556

Query: 483 AVQVYENMKKVEKKPNLV-IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
           A Q++  M++  +  + V  YN +IN   +   +D A+ L       G   D+ TY  +I
Sbjct: 557 AYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMI 616

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G+   G +   +    +   +G   +   +  +IN LC      +A  ++ +M+  G++
Sbjct: 617 DGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVV 676

Query: 601 PDYV 604
           P+ V
Sbjct: 677 PEAV 680



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 192/385 (49%), Gaps = 4/385 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++   +++G  + A  +++  K KG       + + +  + +  +I     L++E 
Sbjct: 295 TYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEA 354

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   ++  +N +I  L ++  + +AL L   M K G+ P++  +N++IN  C++G +
Sbjct: 355 LGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCV 414

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L   +        LP+  T N +I+G+CK  +++ A  I  +M   G+  +V TY
Sbjct: 415 SDANNL---LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITY 471

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            ++++G  +    E+ +     ++++G +PN + YN  I  L     V  AL +L ++ +
Sbjct: 472 NSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRN 531

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV-GDAYSYNILINYLCKSNNLA 446
           + + PD  ++  +  G C NG + +A++L  ++ +++ +     +YNI+IN   +  ++ 
Sbjct: 532 RGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMD 591

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A++L   M  +G  PD  TY  +IDG+CK GN+           ++   P+L  +  +I
Sbjct: 592 MAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVI 651

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL 531
           N LC    +  A  ++    R G++
Sbjct: 652 NCLCVQHRVHEAVGIVHLMVRTGVV 676



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 4/352 (1%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           +L+    Q G  + A  + ++   KG   SI  +N  +  L +   + +  +L  +M   
Sbjct: 333 SLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE 392

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   ++ T+NLVI  LCK   + +A +L    +  G  P++  FN +I+  C+   ++ A
Sbjct: 393 GMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNA 452

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           + +   +  M    V P+ +T+N I+NG CK  + E   E    +++ G   N+ TY  L
Sbjct: 453 IGI---LDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNIL 509

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH- 389
           I+   +     EAL L +E+  RGL+P+ V + + I      GD++ A  +   M  ++ 
Sbjct: 510 IESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYR 569

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           IC    TY+I+         +  A KL +++ ++    D+Y+Y ++I+  CK  N+ +  
Sbjct: 570 ICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGY 629

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             L   I  G +P + T+G +I+  C    +  AV +   M +    P  V+
Sbjct: 630 DFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 24/115 (20%), Positives = 55/115 (47%), Gaps = 1/115 (0%)

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
            Y IC  T A ++ ++ A ++    + A  +  ++  KG     + +   +    K+  +
Sbjct: 567 QYRICH-TVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNV 625

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
              +    + +  G+V ++ TF  VI  LC + ++ EA+ + + M+++G+ P  V
Sbjct: 626 NSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAV 680


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 253/508 (49%), Gaps = 10/508 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G T  A  V++  +  G +V + A+N  ++   +  ++    +L   M    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---P 140

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  LC   ++ EALSL   ML  G  P+VV + +++   C+      A+
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++  +M         PN VT+N IING C+ GRV+ A E    +   G   +  +Y T++
Sbjct: 201 EVLDEM---RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G       E+   L  EM+++  MPN V ++  + +    G VE A+ VL  M   H C
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM-SGHGC 316

Query: 392 PDHFTY-SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             + T  +I+   +C+ G V  AF+  N +       D  SY  ++  LC++     AK+
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL  M+ +   P+ +T+ T I   C+ G IE A  + E M +   + N+V YN+++NG C
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               +D+A  L  +       + ITY TL+ G     ++  A  + +EM     A N V 
Sbjct: 437 VQGRVDSALELFYSMP--CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N+L++F C+ G   +A EL++ M+ HG  P+ +TY TL+   + +C+ EE +EL   +V
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +GVSPD  TY++II  L  E   E+ +
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAI 582



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 247/498 (49%), Gaps = 10/498 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ LV    + G  + A  +I  + V   +   + +   +  L     +G    L  +M+
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVAPDA---YTYTPIIRGLCDRGRVGEALSLLDDML 172

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +V T+ +++ A+CK     +A+ +   M   G  PN+V +N+IIN  C+ G ++
Sbjct: 173 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 232

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +   ++   S     P++V++  ++ G C   R E  EE+   M++     N  T+ 
Sbjct: 233 DAREFLNRL---SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+  + RGG  E A+++ ++M   G   N  + N  I+ +  +G V+ A   L++M   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  +Y+ + KGLCR    + A +L  +++ ++   +  ++N  I  LC+   +  A
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQA 409

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L+  M   G   +I+TY  L++G+C  G ++ A++++ +M     KPN + Y +++ G
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTG 466

Query: 509 LCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC    LDAA  LL +  Q+    + +T+N L++ +   G + EA  +  +M   G   N
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + YN L++ +      ++A EL+  ++ +G+ PD VTY++++   S+    EE I++  
Sbjct: 527 LITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH 586

Query: 628 DMVLSGVSPDNQTYNAII 645
            +   G+ P    YN I+
Sbjct: 587 IVQDLGMRPKAVIYNKIL 604



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 250/508 (49%), Gaps = 11/508 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L  L+ +L  +  C+ +   +  L+ A  +      A +V+ +++ KG + +I  +N  +
Sbjct: 165 LSLLDDML--HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVII 222

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           + + +   +    +    + S G+  +  ++  V+  LC   + E+   L+  M++    
Sbjct: 223 NGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM 282

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN V F+M++   C+ G +E A+++  +   MSG     N+   N +IN  CK GRV+ A
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQ---MSGHGCAANTTLCNIVINTICKQGRVDDA 339

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M   G   +  +Y T++ G  R    E+A  L  EMV++   PN V +N+ I  
Sbjct: 340 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
           L  +G +E A  ++  M  +H C  +  TY+ L  G C  G V  A +L   +       
Sbjct: 400 LCQKGLIEQATMLIEQM-SEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKP 455

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +Y  L+  LC +  L AA +LL+ M+ +   P+++T+  L+  +C+ G ++ A+++ 
Sbjct: 456 NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELV 515

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           E M +    PNL+ YN++++G+  D + + A  LL      G+  D +TY+++I      
Sbjct: 516 EQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRE 575

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            ++ EA  MF  ++++G+    V YN ++  LCK      A +    M+ +G +P+ +TY
Sbjct: 576 DRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTY 635

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            TL+   +     +E  +L  ++   GV
Sbjct: 636 ITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/482 (23%), Positives = 215/482 (44%), Gaps = 42/482 (8%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +LD       TP +  ++ ++    + G  + A + + +L   G      ++   L  L 
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLC 261

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                    +L+ EM+    + N  TF++++   C+   +E A+ +  +M   G   N  
Sbjct: 262 AAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTT 321

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             N++IN  C+ G ++ A +    MG        P+++++  ++ G C+  R E A+E+ 
Sbjct: 322 LCNIVINTICKQGRVDDAFQFLNNMGSYGCS---PDTISYTTVLKGLCRAERWEDAKELL 378

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M++     N  T+ T I    + G  E+A  L ++M + G   N V YN+ ++    +
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 373 GDVEGALFV--------------------------------LSDMIDKHICPDHFTYSIL 400
           G V+ AL +                                L++M+ K   P+  T+++L
Sbjct: 439 GRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 498

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               C+ G + +A +L  Q++E     +  +YN L++ +    N   A +LL  ++  G+
Sbjct: 499 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGV 558

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PDI+TY ++I    +   +E A++++  ++ +  +P  VIYN I+  LCK  + D A  
Sbjct: 559 SPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAID 618

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                   G + + +TY TLI G      + E   +  E+ + G+ +NK   N+L  +  
Sbjct: 619 FFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV-LNK---NLLEEWRP 674

Query: 580 KF 581
           KF
Sbjct: 675 KF 676



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 204/451 (45%), Gaps = 24/451 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLL------DSYEI-------- 141
           I++ +    R DDA   +  L S     ++VS    L+GL       D  E+        
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      FD LVR   + G  E A  V++++   G + +    N  ++ + K   +   +
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +    M S G   +  ++  V+  LC+  + E+A  L   M++    PN V FN  I   
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 400

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G +E A  L  +   MS      N VT+N ++NGFC  GRV+ A E+ Y+M      
Sbjct: 401 CQKGLIEQATMLIEQ---MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCK 454

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TL+ G       + A  L  EM+++   PN V +N  + +   +G ++ A+ +
Sbjct: 455 PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIEL 514

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M++    P+  TY+ L  G+  +   ++A +L + ++   +  D  +Y+ +I  L +
Sbjct: 515 VEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSR 574

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            + +  A ++   +   G+ P  + Y  ++   CK  N +GA+  +  M      PN + 
Sbjct: 575 EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELT 634

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           Y ++I GL  +  L   + LL+     G+L+
Sbjct: 635 YITLIEGLANEDFLKETRDLLRELCSRGVLN 665



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 33/327 (10%)

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ +  L A  D+  A  ++     +   PD +  + L + LCR G    A ++      
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM-----------IVRGLI---------- 461
                D ++YN L+   C+   L AA++L++SM           I+RGL           
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALS 166

Query: 462 -----------PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
                      P ++TY  L++  CK      A++V + M+     PN+V YN IING+C
Sbjct: 167 LLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMC 226

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           ++  +D A+  L      G   D ++Y T++ G     +  +   +F+EM       N+V
Sbjct: 227 REGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEV 286

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            +++L+ F C+ G  ++A ++++ M  HG   +      ++    K    ++  +  ++M
Sbjct: 287 TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 346

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
              G SPD  +Y  ++  L   +  ED
Sbjct: 347 GSYGCSPDTISYTTVLKGLCRAERWED 373


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 255/512 (49%), Gaps = 6/512 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + TP +  F+ L+ A  +I        + +++ + G +      N  ++    LN++   
Sbjct: 87  QPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFG 146

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             +  EM+  G+  N  TF  ++  LC   ++ EA  L  +M++ G  PNVV +  ++N 
Sbjct: 147 LAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNG 206

Query: 261 ACQVGDLEFALKLFRKMGVMSGD---SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
            C  G+   A+KL  +M   +G    ++ PN V +  II+  CK G ++  +E+   M  
Sbjct: 207 LCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKG 266

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            GI  +V  Y+++I G    G  E A  L +EMV  G+ PN V +N  I  L   G +E 
Sbjct: 267 RGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEE 326

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +L  MI +   PD FTY+ L  G C  G +  A  L   +  + +  DA SYN+LIN
Sbjct: 327 ANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLIN 386

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             CKS  +  AK+L   M+ + ++P +ITY TL+ G  + G +  A  ++  MK  +  P
Sbjct: 387 GYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTP 446

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMF 556
               YN +++GLCK+  L  A  L    +      +I  +N LI+G     KI  A  +F
Sbjct: 447 ESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELF 506

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + + + G+  N + Y ++I+ LCK G  + A++L   M   G  P+ VT+ TL+  F +N
Sbjct: 507 NRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN 566

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              ++V+EL  +M     SPD  T + ++  L
Sbjct: 567 DEMQKVVELLQEMAEKDFSPDASTISIVVDLL 598



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 228/448 (50%), Gaps = 27/448 (6%)

Query: 100 IVHLLVNWRRFDDALLLMGNLM----SANSVSPLEFLEGLLDSYEICKAT---------- 145
           +++   N  + D  L ++G ++    S N+V+    ++GL     I +AT          
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192

Query: 146 --PAV--FDALVRACTQIGATEGAYDVIQKL--KVKGHSVSIHA----WNNFLSHLVKLN 195
             P V  +  L+      G T  A  + +++     G  V+I      +   +  L K  
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
            I +  +L+ EM   G   +V  ++ +I+ +C   + E A  L+  M+  G+ PNVV FN
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           ++I+  C+ G +E A  L + M +  G+S  P++ T+N +I+GFC  GR++ A ++  +M
Sbjct: 313 VLIDALCKAGKMEEANHLLKLM-IQRGES--PDTFTYNTLIDGFCLEGRIDDARDLFVSM 369

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
              GI+ +  +Y  LI+GY + G   EA +L  EM+ + +MP  + YN+ +  LF EG V
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  +  +M    + P+  TY+IL  GLC+N  + +A +L + +           +N L
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ LCK+  +  A++L + +   GL P++ITY  +I G CK G +E A  ++  M++   
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQ 523
            PNLV +N+++ G C++  +     LLQ
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQ 577



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 213/432 (49%), Gaps = 10/432 (2%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K  EA S++  ++     P +  FN ++    ++      + L+++M ++    + P+ +
Sbjct: 72  KRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIG---LAPDFI 128

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +IN +C L +V+F   +   M++ G   N  T+ +L+ G   G    EA  L  +M
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH------ICPDHFTYSILTKGL 404
           V+ G  PN V Y + ++ L   G+   A+ +  +M++ +      I P+   Y  +   L
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C++G + +  +L  ++    +  D  +Y+ +I+ +C +     AK L + M+  G+ P++
Sbjct: 249 CKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +T+  LID  CK G +E A  + + M +  + P+   YN++I+G C +  +D A+ L  +
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +  G+  DA++YN LINGY  +G++ EA  ++ EM    I    + YN L+  L + G 
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            + A  L   M +H + P+  TY  L+    KN    E +EL   +      P  Q +N 
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488

Query: 644 IISPLLGEKSAE 655
           +I  L   +  E
Sbjct: 489 LIDGLCKARKIE 500



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 179/393 (45%), Gaps = 44/393 (11%)

Query: 300 CKLGRVEFAE--EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           CK G ++ +E   +   +I       + ++ TL+   A+     + + L   M   GL P
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + +  N  I+       V+  L VL +M+ +   P+  T++ L KGLC    + +A  L 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG------LIPDIITYGTLI 471
            +++      +  +Y  L+N LC + N   A +L   M+         + P+++ Y T+I
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           D  CK G I+   +++  MK     P++V Y+SII+G+C     + AK L       G+ 
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 531 LDAITYN-----------------------------------TLINGYFINGKIAEAFAM 555
            + +T+N                                   TLI+G+ + G+I +A  +
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F  M + GI  + V YN+LIN  CK G   +A++L + M+   I+P  +TY TL+T   +
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                +   L  +M +  ++P++ TYN ++  L
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGL 458



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 143/312 (45%), Gaps = 3/312 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+ A  + G  E A  +++ +  +G S     +N  +        I     L+  M
Sbjct: 310 TFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM 369

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   +  ++N++I   CK  ++ EA  LY  M+   I P V+ +N ++    + G +
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  LF +M V     + P S T+N +++G CK   +  A E+ + +       +++ +
Sbjct: 430 RDAWNLFGEMKV---HDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIF 486

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LIDG  +    E A  L + +   GL PN + Y   IH L   G +E A  +   M +
Sbjct: 487 NCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEE 546

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  T++ L +G C+N  +++  +L  ++ E+    DA + +I+++ L K      
Sbjct: 547 KGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYRE 606

Query: 448 AKQLLSSMIVRG 459
              LL +   +G
Sbjct: 607 YLHLLPTFPAQG 618


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/617 (26%), Positives = 307/617 (49%), Gaps = 37/617 (5%)

Query: 63  VNRVVSEF-RKSPKLALEFYTWVGEN--NRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           +NR +++  R SP  A+  Y  +     +  +  L +   ++       R D     +GN
Sbjct: 53  LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112

Query: 120 LMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG--AYDVIQKL- 172
           ++      ++++    L+GL       K T    D ++R  T++G      +Y+++ K  
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCAD----KRTSDAMDIVLRRMTELGCIPNVFSYNILLKGL 168

Query: 173 -------------------KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                              +  G    + ++   ++   K  +  + +  Y EM+  G +
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGIL 228

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V T+N +I ALCK   +++A+ +   M+K+G+ P+ + +N I++  C  G  + A+  
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            +KM     D V P+ VT++ +++  CK GR   A +I  +M K G+   + TY TL+ G
Sbjct: 289 LKKM---RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           YA  G+  E   L D MV+ G+ P++ V++  I     +G V+ A+ V S M  + + P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPN 405

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY  +   LC++G V+ A     Q+++E +      YN LI+ LC  N    A++L+ 
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+ RG+  + I + ++ID +CK G +  + +++E M ++  KPN++ YN++ING C   
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  LL     +GL  + +TY+TLINGY    ++ +A  +F EM + G++ + + YN
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           I++  L +      A+EL   +   G   +  TY  ++    KN   ++ +++  ++ L 
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645

Query: 633 GVSPDNQTYNAIISPLL 649
            +  + +T+N +I  LL
Sbjct: 646 DLKLEARTFNIMIDALL 662



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 200/419 (47%), Gaps = 4/419 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  +   +  +G    I  +   L        +     L   MV  G   +   F+++I 
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A   + K+++A+ ++ +M + G+ PN V +  +I   C+ G +E A+  F +M     + 
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM---IDEG 436

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P ++ +N +I+G C   + E AEE+   M+  GI  N   + ++ID + + G   E+ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L + MV+ G+ PN + YN+ I+     G ++ A+ +LS M+   + P+  TYS L  G 
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   ++ A  L  ++    +  D  +YNI++  L ++   AAAK+L   +   G   ++
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY  ++ G CK    + A+Q+++N+  ++ K     +N +I+ L K    D AK L  A
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
               GL+ +  TY  +       G + E   +F  M + G  V+    N ++  L + G
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 3/344 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF  L+ A    G  + A  V  K++ +G + +   +   +  L K   +      +++M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G       +N +I+ LC   K E A  L   ML  GI  N + FN II+  C+ G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V PN +T+N +ING+C  G+++ A ++   M+  G+  N  TY
Sbjct: 493 IESEKLFE---LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +TLI+GY +    E+AL L  EM   G+ P+ + YN  +  LF       A  +   + +
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N     A ++   +    +  +A ++NI+I+ L K      
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           AK L  +    GL+P+  TY  + +     G +E   Q++ +M+
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 164/352 (46%), Gaps = 8/352 (2%)

Query: 315 MIKAGID---CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
           M +AG D    ++ TY  LI    R G  +        ++K+G   + + +   +  L A
Sbjct: 75  MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134

Query: 372 EGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG--- 427
           +     A+  VL  M +    P+ F+Y+IL KGLC     ++A +L + + ++   G   
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  SY  +IN   K  +   A      M+ RG++PD++TY ++I   CK   ++ A++V 
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
             M K    P+ + YNSI++G C       A   L+  +  G+  D +TY+ L++    N
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G+  EA  +F  M   G+      Y  L+      G   +   L+ +M+ +GI PD+  +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + L+  ++     ++ + +   M   G++P+  TY A+I  L      ED +
Sbjct: 375 SILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/355 (21%), Positives = 160/355 (45%), Gaps = 20/355 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++ +L    R +DA+L               + E ++D  E       V+++L+     
Sbjct: 411 AVIGILCKSGRVEDAML---------------YFEQMID--EGLSPGNIVYNSLIHGLCT 453

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
               E A ++I ++  +G  ++   +N+ +    K   +    KL++ MV  G   NV T
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I   C   K++EA+ L   M+  G+ PN V ++ +IN  C++  +E AL LF++  
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE-- 571

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M    V P+ +T+N I+ G  +  R   A+E+   + ++G    + TY  ++ G  +  
Sbjct: 572 -MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +++AL++   +    L      +N  I  L   G  + A  +        + P+++TY 
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           ++ + +   G +++  +L   + +     D+   N ++  L +   +  A   LS
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 261/502 (51%), Gaps = 5/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++      G  + AY ++++ K +G   S+ A+N  L+ L K   +G   + ++EM
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N++T+N++I  LCK  ++E A  +   M ++G++PNV+  N++I+  C+   L
Sbjct: 400 KK-DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  +F  M   +     P+ VT   +I+G  K GRV+ A  +   M+ +    N   Y
Sbjct: 459 DEACSIFEGM---NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVY 515

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI  + + G  E+  ++  EM+ RG  P+  + N+ +  +F  G+      +  ++  
Sbjct: 516 TSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKS 575

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +   PD  +YSIL  GL + G  ++ ++L   + E+  V D ++YN  I+  CKS  +  
Sbjct: 576 RGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNK 635

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A QLL  M  +G  P ++TYG++IDG  K   ++ A  ++E  K    + N+VIY+S+I+
Sbjct: 636 AYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G  K   +D A  +++   + GL   + T+N L++      +I EA   F  M+N+    
Sbjct: 696 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTP 755

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N + Y+ILIN LC+   + +A    + M   G+ P+ +TYTT++   +K  +  E   L 
Sbjct: 756 NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLF 815

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           +    +G  PD+ +YNAII  L
Sbjct: 816 ERFKANGGVPDSASYNAIIEGL 837



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 255/541 (47%), Gaps = 14/541 (2%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVI 169
           D+LLL   +M+ N     ++ E +L    I    P+      L+ +C +       +D+I
Sbjct: 132 DSLLL---VMAKNV--KFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLI 186

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           Q ++      +  A+   +  L  + E      L+ +M   GY  +V+ F  VI    +E
Sbjct: 187 QCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFARE 246

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +L+ ALSL   M  + +  ++V +N+ I+   + G ++ A K F +   +    +LP+ 
Sbjct: 247 GRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHE---IKSHGLLPDD 303

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIK-AGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           VT+  +I   CK  R++ A EI   M +   + C    Y T+I GY   G  +EA  L +
Sbjct: 304 VTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPC-AYAYNTMIMGYGSAGKFDEAYSLLE 362

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
               RG +P+ + YN  +  L  +G +  AL    +M  K   P+  TY++L   LC+ G
Sbjct: 363 RQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAG 421

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V+ AFK+ + + E  +  +  + NI+I+ LCK+  L  A  +   M  +   PD +T+ 
Sbjct: 422 EVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFC 481

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQR 527
           +LIDG  K G ++ A ++YE M   +K PN V+Y S+I    K     D  K   +   R
Sbjct: 482 SLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHR 541

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
               D    N  ++  F  G+  +  A+F E+++ G   + + Y+ILI+ L K G  ++ 
Sbjct: 542 GCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARET 601

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            EL   M   G + D   Y T +  F K+    +  +L ++M   G  P   TY ++I  
Sbjct: 602 YELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDG 661

Query: 648 L 648
           L
Sbjct: 662 L 662



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 232/504 (46%), Gaps = 7/504 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  ++R   + G  + A  ++ ++K       I  +N  +    K  ++   WK + E+
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEI 294

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G + +  T+  +I  LCK  +L+EA+ ++ +M ++   P    +N +I      G  
Sbjct: 295 KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKF 354

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR-YAMIKAGIDCNVRT 326
           + A  L  +         +P+ + +NCI+    K GR+   E +R +  +K     N+ T
Sbjct: 355 DEAYSLLERQ---KARGCIPSVIAYNCILTCLGKKGRL--GEALRTFEEMKKDAAPNLST 409

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LID   + G  E A ++ D M + GL PN +  N  I  L     ++ A  +   M 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K   PD  T+  L  GL + G V  A++L+ Q+L+   + +A  Y  LI    K     
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKE 529

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              ++   MI RG  PD+      +D   K G       ++E +K     P+++ Y+ +I
Sbjct: 530 DGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILI 589

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GL K         L  A +  G +LD   YNT I+G+  +GK+ +A+ +  EM+  G  
Sbjct: 590 HGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQ 649

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
              V Y  +I+ L K     +A  L +    +G+  + V Y++L+  F K    +E   +
Sbjct: 650 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLI 709

Query: 626 HDDMVLSGVSPDNQTYNAIISPLL 649
            ++++  G++P+  T+N ++  L+
Sbjct: 710 MEELMQKGLTPNVYTWNCLLDALV 733



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 238/508 (46%), Gaps = 27/508 (5%)

Query: 18  RAFHVGKQFANP--STEDIVFRAIC-VNLRQRKWKILEQMAPS--LTNSL-VNRVVSEFR 71
           R F   K+ A P  ST +++   +C     +  +K+ + M  +    N + VN ++    
Sbjct: 394 RTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLC 453

Query: 72  KSPKLALEFYTWVGENNRFSHSLESS-CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           K+ KL      + G N++     E + C+++  L    R DDA  L              
Sbjct: 454 KAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRL-------------- 499

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
             E +LDS +I  A   V+ +L+++  + G  E  + + +++  +G S  +   N ++  
Sbjct: 500 -YEQMLDSDKIPNAV--VYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDC 556

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           + K  E G+   L++E+ S G++ +V +++++I+ L K     E   L+Y M + G   +
Sbjct: 557 VFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLD 616

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
              +N  I+  C+ G +  A +L  +M         P  VT+  +I+G  K+ R++ A  
Sbjct: 617 THAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQ---PTVVTYGSVIDGLAKIDRLDEAYM 673

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +       G++ NV  Y++LIDG+ + G  +EA  + +E++++GL PN   +N  +  L 
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 733

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
              ++  AL    +M +    P+H TYSIL  GLCR     +AF    ++ ++ +  +  
Sbjct: 734 KAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTI 793

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  +I  L K+ N+A A  L       G +PD  +Y  +I+G         A +++E  
Sbjct: 794 TYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEET 853

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAA 518
           +      +     ++++ L KD  L+ A
Sbjct: 854 RMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/474 (23%), Positives = 209/474 (44%), Gaps = 33/474 (6%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + ++ L+    + G  E A+ V   +K  G   ++   N  +  L K  ++     +++ 
Sbjct: 408 STYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEG 467

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +  TF  +I  L K+ ++++A  LY +ML S   PN V +  +I    + G 
Sbjct: 468 MNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGR 527

Query: 267 LEFALKLFRKM--------------------------------GVMSGDSVLPNSVTHNC 294
            E   K+F++M                                  +     +P+ ++++ 
Sbjct: 528 KEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSI 587

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I+G  K G      E+ YAM + G   +   Y T IDG+ + G   +A +L +EM  +G
Sbjct: 588 LIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKG 647

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P  V Y S I  L     ++ A  +  +     +  +   YS L  G  + G + +A+
Sbjct: 648 RQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAY 707

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +  +++++ +  + Y++N L++ L K+  +  A     +M      P+ ITY  LI+G 
Sbjct: 708 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGL 767

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDA 533
           C+      A   ++ M+K   KPN + Y ++I GL K  ++  A SL +      G+ D+
Sbjct: 768 CRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDS 827

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
            +YN +I G   + +  EA+ +F E R  G  ++      L++ L K  C +QA
Sbjct: 828 ASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQA 881



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 187/428 (43%), Gaps = 17/428 (3%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +E ALSL+    K+         +++I    +  D+  A+  FR     +  ++ P +  
Sbjct: 82  VENALSLFVESPKT---------DLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEA-- 130

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ ++    K  + ++ E+I   M  AG   + +T   LI    +     E   L   M 
Sbjct: 131 YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMR 190

Query: 352 KRGLMPNNVVYNSTIHWLFA--EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           K    P    Y + I  L +  E D+   LF     +   +    FT  I  +   R G 
Sbjct: 191 KFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVI--RVFAREGR 248

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A  L +++    +  D   YN+ I+   K+  +  A +    +   GL+PD +TY +
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS 308

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           +I   CKG  ++ AV+++E M++    P    YN++I G       D A SLL+  +  G
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368

Query: 530 LLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
            + + I YN ++      G++ EA   F EM+    A N   YN+LI+ LCK G  + A 
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DAAPNLSTYNVLIDMLCKAGEVEAAF 427

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           ++   M   G+ P+ +T   ++ R  K    +E   + + M     SPD  T+ ++I  L
Sbjct: 428 KVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGL 487

Query: 649 LGEKSAED 656
             +   +D
Sbjct: 488 GKQGRVDD 495


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 234/469 (49%), Gaps = 6/469 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK--LEEALSLYYR 241
           +N  L  LVK         L K+M       NV T  ++I  LC   +  +  A S   +
Sbjct: 72  FNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGK 131

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M K G+ P  V F  ++N  C    +  A+KLF ++G M      P+ +T+  II G CK
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG---FAPSLITYTTIIKGLCK 188

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G    A ++   M + G   +V  Y T+ID   +   + EA+    EMV +G+ PN V 
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y+S +H     G +  A  +   MI +++ P+  T++IL  GLC+ G + +A ++   + 
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +  DAY+Y+ L++  C  + +  A++L   M+ +G  P +  Y  LI+G+CK   + 
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A  +   M   +  P+ V Y++++ G C+      A+ L +     GLL D+ITY+ L+
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G   +G + EAF +   M+   I  +   YNILI  +C FG  + AREL   + + GI 
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           P  VTYT +++   K     E  E+   MV++G  P++ TYN  I   L
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL 537



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 230/453 (50%), Gaps = 11/453 (2%)

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
            + +G+ +KL       G      TF  ++  LC + K+ +A+ L+  + K G  P+++ 
Sbjct: 126 FSALGKMFKL-------GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLIT 178

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  II   C++G    AL+L +KM         P+ V +N +I+  CK  R   A     
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKM---EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFS 235

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M+  GI  NV TY++++ G+   G   EA  L  +M+ R +MPN V +   +  L  EG
Sbjct: 236 EMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG 295

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +  A  V   M +  + PD +TYS L  G C    + +A KL + ++ +        YN
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ILIN  CKS  L  AK LLS M  R L PD +TY TL+ G+C+ G  + A ++++ M   
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEA 552
              P+ + Y+ +++GLCK   LD A  LL+A Q   +   I  YN LI G    GK+  A
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +FS +   GI  + V Y ++I+ L K G   +A E+ + M+++G +P+  TY   +  
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           F +N  P   + L ++MV  G S D+ T+  ++
Sbjct: 536 FLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 217/413 (52%), Gaps = 7/413 (1%)

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
           +D I K+   G + S+  +   +  L K+       +L K+M   G   +V  +N VI +
Sbjct: 164 FDEIGKM---GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LCK+ +  EA+  +  M+  GI PNVV ++ I++  C +G L  A  LF++   M G +V
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ---MIGRNV 277

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +PN+VT   +++G CK G +  A  +   M + G++ +  TY+ L+DGY      +EA +
Sbjct: 278 MPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQK 337

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L D MV +G  P+  VYN  I+       +  A  +LS+M D+ + PD  TYS L +G C
Sbjct: 338 LFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFC 397

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G  + A KL  ++    ++ D+ +Y+IL++ LCK  +L  A +LL +M    + P I 
Sbjct: 398 QAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHIC 457

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            Y  LI G C  G +E A +++ N+     +P++V Y  +I+GL K+   + A  + +  
Sbjct: 458 IYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKM 517

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
              G L ++ TYN  I G+  NG  + A  +  EM   G + +   + +L++ 
Sbjct: 518 VVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 173/350 (49%), Gaps = 5/350 (1%)

Query: 142 CKATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           CK     ++ ++ + C    A E  Y    ++  +G   ++  +++ L     L ++   
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMY-FFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEA 265

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             L+K+M+    + N  TF +++  LCKE  + EA  ++  M ++G+ P+   ++ +++ 
Sbjct: 266 TSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDG 325

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C    ++ A KLF    +M G    P+   +N +ING CK  R+  A+ +   M    +
Sbjct: 326 YCLQSQMDEAQKLF---DIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY+TL+ G+ + G  + A +L  EM   GL+P+++ Y+  +  L   G ++ A  
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L  M +  I P    Y+IL +G+C  G ++ A +L + +  + +     +Y ++I+ L 
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           K      A ++   M+V G +P+  TY   I G+ + G+   AV++ E M
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P  IT G     Y    ++  AV  +  +  +   P +V++N ++  L K        SL
Sbjct: 32  PSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISL 91

Query: 522 LQASQRIGLLDAI-TYNTLINGYFINGK--IAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +      +   + T   LIN    + +  +  AF+   +M  +G+    V +  L+N L
Sbjct: 92  CKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGL 151

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C       A +L   +   G  P  +TYTT++    K       ++L   M   G  PD 
Sbjct: 152 CSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDV 211

Query: 639 QTYNAIISPLLGEKSAED 656
             YN +I  L  ++ A +
Sbjct: 212 VAYNTVIDSLCKDRRANE 229


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 273/568 (48%), Gaps = 20/568 (3%)

Query: 84  VGENNRFSHSLESSC--AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEI 141
           V E  R  H + +    + V      RRFDDA+ L+ N +  ++                
Sbjct: 112 VREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFG-------------- 157

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            +A   VF+ L+    +    +    V  ++  +G    +   N  +  L + +++    
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            + +EM S G   +  TF  ++    +E  +E AL +  +M+++G  P  V  N++IN  
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGY 277

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++G +E AL   ++      D   P+ VT+N  ++G C+ G V  A ++   M++ G D
Sbjct: 278 CKMGRVEDALGYIQQE---IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD 334

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY T+I+  ++ G  +EA  + ++MV RG +P+   +N+ I  L ++  +E AL +
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             ++  K + PD +T++IL   LC+ G      +L  ++       D  +YNILI++LC 
Sbjct: 395 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCS 454

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A  LL+ M   G     +TY T+ID  CK   IE A +V++ M       + V 
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           +N++I+GLCK   +D A  L++   + GL  + ITYN+++  Y   G I +A  +   M 
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMT 574

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G  ++ V Y  LIN LCK G  Q A +L++ M + GI P    Y  ++    +  +  
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 634

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + + L  +M   G  PD  TY  +   L
Sbjct: 635 DALNLFREMTEVGEPPDALTYKIVFRSL 662



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 240/474 (50%), Gaps = 4/474 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N+ L+ LV+ +++     +Y EM   G   +V T N +I ALC+  ++  A+ +   M 
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 224

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+ P+   F  ++    + G +E AL++  KM + +G S  P  VT N +ING+CK+G
Sbjct: 225 SHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKM-MEAGCS--PTGVTVNVLINGYCKMG 281

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           RVE A       I  G + +  TY T + G  + G    AL++ D M++ G  P+   YN
Sbjct: 282 RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 341

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I+ L   G+++ A  +++ M+D+   PD  T++ L   L     +++A  L  ++  +
Sbjct: 342 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK 401

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D Y++NILIN LCK  +     +L   M   G  PD +TY  LID  C  G +  A
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
           + +   M+      + V YN+II+ LCK   ++ A+ +       G+   A+T+NTLI+G
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
                +I +A  +  +M   G+  N + YN ++   CK G  ++A ++++ M  +G   D
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            VTY TL+    K    +  ++L   M + G+ P  + YN +I  L    +  D
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 635



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 252/508 (49%), Gaps = 7/508 (1%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           + AV++ +V+     GA +    ++++++ +GH V      +F+    +L        L 
Sbjct: 88  SSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLV 147

Query: 205 KEMV---SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
              +   + G   +   FN ++  L +  KL+   S+Y  M   GI P+VV  N +I   
Sbjct: 148 LNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKAL 207

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   +  A+ +  +   MS   V P+  T   ++ GF + G +E A  ++  M++AG  
Sbjct: 208 CRAHQVRTAVLMLEE---MSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCS 264

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
               T   LI+GY + G  E+AL    + +  G  P+ V YN+ +H L   G V  AL V
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M+ +   PD FTY+ +   L +NG + +A  + NQ+++   + D  ++N LI  L  
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            N L  A  L   + V+GL PD+ T+  LI+  CK G+    ++++E MK     P+ V 
Sbjct: 385 QNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVT 444

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +I+ LC    L  A  LL   +  G     +TYNT+I+      +I EA  +F +M 
Sbjct: 445 YNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMD 504

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI+ + V +N LI+ LCK      A EL++ M+  G+ P+ +TY +++T + K  + +
Sbjct: 505 AQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIK 564

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  ++ + M  +G   D  TY  +I+ L
Sbjct: 565 KAADILETMTANGFEIDVVTYGTLINGL 592



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 182/375 (48%), Gaps = 6/375 (1%)

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           D +E  + T   ++  V    Q G    A  V+  +  +GH   +  +N  ++ L K  E
Sbjct: 296 DGFEPDQVT---YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 352

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           +     +  +MV  G + +  TFN +I AL  + +LEEAL L   +   G+ P+V  FN+
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +IN  C+VGD    ++LF +M         P+ VT+N +I+  C +G++  A ++   M 
Sbjct: 413 LINALCKVGDPHLGIRLFEEM---KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEME 469

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G   +  TY T+ID   +    EEA  + D+M  +G+  + V +N+ I  L     ++
Sbjct: 470 SNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRID 529

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  ++  M+ + + P++ TY+ +    C+ G +K+A  +   +       D  +Y  LI
Sbjct: 530 DATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLI 589

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N LCK+     A +LL  M ++G+ P    Y  +I    +  N+  A+ ++  M +V + 
Sbjct: 590 NGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEP 649

Query: 497 PNLVIYNSIINGLCK 511
           P+ + Y  +   LC+
Sbjct: 650 PDALTYKIVFRSLCR 664



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 173/373 (46%), Gaps = 1/373 (0%)

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V  ++V  N ++N   +  +++  E +   M   GI  +V T  TLI    R      A+
Sbjct: 158 VQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAV 217

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            + +EM   G+ P+   + + +     EG +E AL V + M++    P   T ++L  G 
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGY 277

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G V+ A     Q + +    D  +YN  ++ LC++ +++ A +++  M+  G  PD+
Sbjct: 278 CKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV 337

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY T+I+   K G ++ A  +   M      P+   +N++I  L     L+ A  L + 
Sbjct: 338 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARE 397

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               GL  D  T+N LIN     G       +F EM++ G   ++V YNILI+ LC  G 
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
              A +L+  M  +G     VTY T++    K    EE  E+ D M   G+S    T+N 
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517

Query: 644 IISPLLGEKSAED 656
           +I  L   K  +D
Sbjct: 518 LIDGLCKAKRIDD 530



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 182/365 (49%), Gaps = 9/365 (2%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDA 151
           L+ +  IV+ +V+     D       +++ +S + LE    L     +   +P V  F+ 
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+ A  ++G       + +++K  G +     +N  + HL  + ++G    L  EM S G
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+N +I ALCK+ ++EEA  ++ +M   GI  + V FN +I+  C+   ++ A 
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L  +M     + + PN++T+N I+  +CK G ++ A +I   M   G + +V TY TLI
Sbjct: 533 ELIEQM---VKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLI 589

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           +G  + G ++ AL+L   M  +G+ P    YN  I  LF   ++  AL +  +M +    
Sbjct: 590 NGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEP 649

Query: 392 PDHFTYSILTKGLCR-NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
           PD  TY I+ + LCR  G +K+AF    +++ +  + +  S+ +L   L    NL     
Sbjct: 650 PDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL---NLGMDDY 706

Query: 451 LLSSM 455
           L+S++
Sbjct: 707 LISAI 711



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 15/326 (4%)

Query: 341 EEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
           E ALR+ +  + R    P++ VY   +  L       GA  ++  ++ +     H   ++
Sbjct: 70  EAALRMLNSALAREDFAPSSAVYEEIVQKL----GTAGAFDLMEGLVREMRREGHQVRAV 125

Query: 400 LTKGLCRNGCVKQAFK-----LHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQL 451
           + +    +    + F      + NQ L+    G   D   +N L+N L + + L   + +
Sbjct: 126 VVRSFVESYARLRRFDDAVDLVLNQ-LDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESV 184

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
            + M  RG+ PD++T  TLI   C+   +  AV + E M      P+   + +++ G  +
Sbjct: 185 YNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIE 244

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           + S++AA  +       G     +T N LINGY   G++ +A     +    G   ++V 
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVT 304

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN  ++ LC+ G    A ++M +M+  G  PD  TY T++   SKN   +E   + + MV
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV 364

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G  PD  T+N +I  L  +   E+
Sbjct: 365 DRGCLPDTTTFNTLIVALSSQNRLEE 390


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/408 (33%), Positives = 217/408 (53%), Gaps = 3/408 (0%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           +  +G  P+   +N  +      GDL  A+ + R+MG     +  PN+ ++N +I G  +
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMG--RDGAPPPNAFSYNVVIAGMWR 212

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A E+   M +  +  N  TY T+IDG+ +GG  E   RL D+MV  GL PN + 
Sbjct: 213 AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAIT 272

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  +  L   G +     +L +M  + + PD FTYSIL  GL RNG  K    L  + L
Sbjct: 273 YNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 332

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  +    Y+ +IL+N LCK   ++ A+++L S++  GL+P  + Y TLI+GYC+ G +E
Sbjct: 333 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 392

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLI 540
           GA   +  MK    KP+ + YN++INGLCK   +  A+ LL   Q  G+   + T+NTLI
Sbjct: 393 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 452

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           + Y   G++ + F + SEM+  G+  N V Y  ++N  CK G   +A  ++  M    ++
Sbjct: 453 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 512

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+   Y  ++  + ++   ++   L + M  +G+SP   TYN +I  L
Sbjct: 513 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 243/481 (50%), Gaps = 5/481 (1%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKEC 230
           L   G      AWN  +   V   ++G    + + M   G    N  ++N+VI  + +  
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 214

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +  +A+ ++  M +  + PN + +N +I+   + GDLE   +L  +M V  G  + PN++
Sbjct: 215 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM-VCHG--LKPNAI 271

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +++G C+ GR+     +   M    +  +  TY+ L DG +R G S+  L L  + 
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +K G+   +   +  ++ L  +G V  A  VL  +++  + P    Y+ L  G C+ G +
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           + AF    Q+   H+  D  +YN LIN LCK+  +  A+ LL  M   G+ P + T+ TL
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIG 529
           ID Y + G +E    V   M++   KPN+V Y SI+N  CK+  +  A ++L     +  
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           L +A  YN +I+ Y  +G   +AF +  +M++ GI+ + V YN+LI  LC      +A E
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++  +  H +IPD V+Y TL++      + ++ ++L   M   G+    +TY+ +IS L 
Sbjct: 572 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 631

Query: 650 G 650
           G
Sbjct: 632 G 632



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 220/451 (48%), Gaps = 10/451 (2%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +   +K  ++   ++L  +MV  G   N  T+N+++  LC+  ++ E  +L   M 
Sbjct: 238 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 297

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFC 300
              + P+   ++++ +   + GD +  L LF K    GV  GD       T + ++NG C
Sbjct: 298 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD------YTCSILLNGLC 351

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G+V  AEE+  +++ AG+      Y TLI+GY + G  E A     +M  R + P+++
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 411

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN+ I+ L     +  A  +L +M D  + P   T++ L     R G +++ F + +++
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E  +  +  SY  ++N  CK+  +  A  +L  M  + ++P+   Y  +ID Y + G  
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 531

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           + A  + E MK     P++V YN +I GLC  + +  A+ ++ +     L+ DA++YNTL
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 591

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+     G I +A  +   M   GI      Y+ LI+ L   G   +   L + M+ + +
Sbjct: 592 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 651

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +P    +  +V  +SK  +  +  +L  +M+
Sbjct: 652 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 682



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 128/276 (46%), Gaps = 3/276 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++AL+    +      A D++ +++  G + ++  +N  +    +  ++ + + +  EM
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV ++  ++ A CK  K+ EA+++   M    + PN   +N II+   + G  
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 531

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L  KM     + + P+ VT+N +I G C   ++  AEEI  ++    +  +  +Y
Sbjct: 532 DQAFILVEKM---KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 588

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI      G+ ++AL L   M K G+      Y+  I  L   G +    ++   M+ 
Sbjct: 589 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQ 648

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
            ++ P +  ++I+ +   + G   +A  L  ++L++
Sbjct: 649 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 108/219 (49%), Gaps = 3/219 (1%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   F+ L+ A  + G  E  + V+ +++  G   ++ ++ + ++   K  +I     + 
Sbjct: 444 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            +M     + N   +N +I A  +    ++A  L  +M  +GI P++V +N++I   C  
Sbjct: 504 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 563

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             +  A ++   +   S   ++P++V++N +I+  C  G ++ A +++  M K GI   V
Sbjct: 564 SQISEAEEIINSL---SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 620

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           RTY  LI G    G   E   L  +M++  ++P+N ++N
Sbjct: 621 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHN 659


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/504 (31%), Positives = 253/504 (50%), Gaps = 8/504 (1%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A P+V D L+      G  + A   + +++      +    N+ L  L +  + G   +L
Sbjct: 132 ALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 191

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  +     V NV TFN+VI  LCKE +L EA +L+ RM   G  P+VV +N +I+   +
Sbjct: 192 FDLLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 247

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            GDLE   +L  +M          + VT+N +IN F K GR+E A      M + G+  N
Sbjct: 248 CGDLEEVEQLVSEM---RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVAN 304

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V T++T +D + + G  +EA++L  +M  RG+MPN   Y S +      G ++ A+ +L 
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M+ + + P+  TY+++  GLC+ G V +A  + + +    +  +   Y  LI+    +N
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N   A  LL+ M  +G+  D+  YGTLI G CK   ++ A  +   M     +PN VIY 
Sbjct: 425 NSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYT 484

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           +I++ L K      A +LL      G   + +TY  LI+G    G I+EA + F++MR +
Sbjct: 485 TIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMREL 544

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N   Y  LI+  CK G   +A  LM  MI  G+  D V YT+L+  + K  + ++ 
Sbjct: 545 GLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDA 604

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
             L   M+ SG+  D   Y   IS
Sbjct: 605 FALKTKMIESGLQLDLYCYTCFIS 628



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 220/409 (53%), Gaps = 4/409 (0%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PNV  FN++I+  C+ G+L  A  LF +M  M      P+ VT+N +I+G+ K G +E  
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCS---PDVVTYNSLIDGYGKCGDLEEV 254

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           E++   M K+G   +V TY  LI+ +++ G  E+A     EM ++G++ N V +++ +  
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDA 314

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
              EG V+ A+ + + M  + + P+ FTY+ L  G C+ G +  A  L ++++ + +V +
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +Y ++++ LCK   +A A  +LS M   G+  + + Y TLI G+    N E A+ +  
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            MK    + ++ +Y ++I GLCKD  +D AKSLL      GL  + + Y T+++  F  G
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           K +EA A+  ++ + G   N V Y  LI+ LCK G   +A      M   G+ P+   YT
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYT 554

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            L+  F K  S  + + L ++M+  G+S D   Y ++I   + + + +D
Sbjct: 555 ALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQD 603



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 224/454 (49%), Gaps = 4/454 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +++L+    + G  E    ++ +++  G +  +  +N  ++   K   + + +
Sbjct: 231 CSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAY 290

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             + EM   G V NV TF+  + A CKE  ++EA+ L+ +M   G+ PN   +  +++  
Sbjct: 291 SYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGT 350

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ A+ L  +M V  G  ++PN VT+  +++G CK G+V  A+ +   M + G+ 
Sbjct: 351 CKAGRLDDAIVLLDEM-VHQG--LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVK 407

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N   Y TLI G+    +SE AL L ++M  +G+  +  +Y + I  L  +  V+ A  +
Sbjct: 408 ANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSL 467

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M    + P+   Y+ +   L + G   +A  L +++L+     +  +Y  LI+ LCK
Sbjct: 468 LHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCK 527

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +++ A    + M   GL P++  Y  LIDG+CK G++  A+ +   M       + V+
Sbjct: 528 AGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVV 587

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y S+I+G  K A+L  A +L       GL LD   Y   I+G+     + EA  + SEM 
Sbjct: 588 YTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMI 647

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
             GI  +K  YN LI    K G  ++A  L   M
Sbjct: 648 GTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 32/382 (8%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    F   V A  + G  + A  +  +++V+G   +   + + +    K   +     L
Sbjct: 303 ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 362

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             EMV  G V NV T+ +++  LCKE K+ EA ++   M + G+  N + +  +I+    
Sbjct: 363 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFM 422

Query: 264 VGDLEFALKLFRKMG--------------------------------VMSGDSVLPNSVT 291
             + E AL L  +M                                  M+G  + PN+V 
Sbjct: 423 NNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVI 482

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  I++   K G+   A  + + ++ +G   NV TY  LIDG  + GS  EA+   ++M 
Sbjct: 483 YTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR 542

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + GL PN   Y + I      G +  A+ ++++MIDK +  D   Y+ L  G  +   ++
Sbjct: 543 ELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQ 602

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            AF L  +++E  +  D Y Y   I+  C  N +  A+ +LS MI  G+ PD   Y  LI
Sbjct: 603 DAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662

Query: 472 DGYCKGGNIEGAVQVYENMKKV 493
             Y K GN+E A  +   M+ V
Sbjct: 663 RKYQKLGNMEEASSLQNEMESV 684


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 262/515 (50%), Gaps = 5/515 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K   A +  +++A  +    E A  +++ ++ KG   S   + + +   VK   +    +
Sbjct: 276 KLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALR 335

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EMVSCG   NV     ++   CK+ KL  AL  + +M ++G  PN V + ++I   C
Sbjct: 336 LKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCC 395

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G++  A  L+ +M      ++ P     N +I GF K+   E A ++    +   I  
Sbjct: 396 KNGNMAKAYDLYTQM---KNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-A 451

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+ TY +L+    + G   EA  L  +M+ +GL P  V YNS I     +G+++ A  V 
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVF 511

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           SDM+D  + P+  TYSIL  G  +NG  + AF + +++++E++V   ++YNI IN LCK 
Sbjct: 512 SDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKV 571

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + A+ +L   + +G +P  +TY +++DG+ K G++  A+  Y  M +    PN++ Y
Sbjct: 572 GRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITY 631

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++ING CK+ + D A  +    +  GL LD   Y  LI+G+     I  A  +FSE+ +
Sbjct: 632 TTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLD 691

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G++ N V YN LI+        + A  L K M+  GI  D  TYTTL+    K      
Sbjct: 692 GGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVL 751

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            ++L+ +M   G+ PD   Y  +I+ L G+   E+
Sbjct: 752 ALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLEN 786



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 239/497 (48%), Gaps = 50/497 (10%)

Query: 126 VSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           VS LEF + + ++          +  L+  C + G    AYD+  ++K K    ++   N
Sbjct: 366 VSALEFFDKMNENGP--SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVN 423

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           + +   +K+       KL+ E V+C  + N+ T+N ++  LCKE K+ EA +L+ +ML  
Sbjct: 424 SLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLLSWLCKEGKMSEATTLWQKMLDK 482

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G+ P  V +N +I   C+ G+L+ A  +F  M +  G  + PN +T++ +++G+ K G  
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDM-LDCG--LKPNVITYSILMDGYFKNGDT 539

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           E+A  +   M+   I  +  TY   I+G  + G + EA  +  + V++G +P  + YNS 
Sbjct: 540 EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           +     EG V  AL    +M +  + P+  TY+ L  G C+N     A K+ N++  + +
Sbjct: 600 MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGL 659

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP----------------------- 462
             D  +Y  LI+  CK  ++  A  L S ++  GL P                       
Sbjct: 660 ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN 719

Query: 463 ------------DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
                       D+ TY TLIDG  K G +  A+ +Y  M      P+++IY  +INGLC
Sbjct: 720 LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLC 779

Query: 511 KDASLDAAKSLLQASQRIGLLDAIT-----YNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
               L+ A+ +L   +R    D+IT     YN LI G+F  G + EAF + +EM + G+ 
Sbjct: 780 GKGQLENAQKILAEMER----DSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835

Query: 566 VNKVGYNILINFLCKFG 582
            N   Y+ILIN   K G
Sbjct: 836 PNDTTYDILINGKIKGG 852



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 178/709 (25%), Positives = 300/709 (42%), Gaps = 93/709 (13%)

Query: 26  FANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRV-----VSEFRKSPKLALEF 80
           +A  +++D  F    + L+ R+   +E   P+  +S++ R      +  +++ P  AL +
Sbjct: 48  YAEKNSQDSNFSENLIFLKSRQ---VELTKPASQDSVLARTNVIDTLLSYKRDPYSALTY 104

Query: 81  YTWVGENNRFSHSLESSCAIVHLLV-NWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           +  +     F  SL+S C ++H+L  +      A  L+   +S +S  P+  +  L+D +
Sbjct: 105 FKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRFISGDS-GPMPNI--LVDHF 161

Query: 140 EICKATPAVFDALVR-------ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
            I       FD+ +R       +  +      A     +L        I   N  L+ LV
Sbjct: 162 -IGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALV 220

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K + I    ++Y++MV  G   +  T ++++ A  K+   EEA   +      G+  +  
Sbjct: 221 KNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAA 280

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            ++++I   C+  D+E A  L + M        +P+  T   +I    K G +  A  ++
Sbjct: 281 AYSIVIQAFCKNLDVELACGLLKDM---RDKGWVPSEGTFTSVIGACVKQGNMVEALRLK 337

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M+  G+  NV    TL+ GY +      AL   D+M + G  PN V Y   I W    
Sbjct: 338 DEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKN 397

Query: 373 GDVEGALFVLSDMIDKHICP----------------------------------DHFTYS 398
           G++  A  + + M +K+ICP                                  + FTY+
Sbjct: 398 GNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYN 457

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L   LC+ G + +A  L  ++L++ +     SYN +I   C+  NL  A  + S M+  
Sbjct: 458 SLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC 517

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL P++ITY  L+DGY K G+ E A  V++ M      P+   YN  INGLCK      A
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577

Query: 519 KSLLQASQRIGLL------------------------------------DAITYNTLING 542
           + +L+     G +                                    + ITY TLING
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           +  N     A  M +EMRN G+ ++   Y  LI+  CK    + A  L   ++  G+ P+
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPN 697

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            V Y +L++ +    + E  + L   M+  G+S D QTY  +I  LL E
Sbjct: 698 SVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKE 746



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 194/414 (46%), Gaps = 33/414 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+    + G    A  + QK+  KG + +  ++N+ +    +   +     ++ +M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           + CG   NV T+++++    K    E A  ++ RM+   I P+   +N+ IN  C+VG  
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 268 EFALKLFRKM-------------GVMSG-------------------DSVLPNSVTHNCI 295
             A  + +K               +M G                     V PN +T+  +
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           INGFCK    + A ++R  M   G++ ++  Y  LIDG+ +    E A  L  E++  GL
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN+V+YNS I       ++E AL +   M+ + I  D  TY+ L  GL + G +  A  
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L++++  + ++ D   Y +LIN LC    L  A+++L+ M    + P++  Y  LI G+ 
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHF 814

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           K GN++ A +++  M      PN   Y+ +ING  K  +  A KSLL    + G
Sbjct: 815 KAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN-SALKSLLSLKFKDG 867


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 265/516 (51%), Gaps = 7/516 (1%)

Query: 133 EGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           E L    E  +A P  +  + ++      G  E AY ++ +LK +G   S+ ++N+ L+ 
Sbjct: 307 EELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTC 366

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K  ++     L++ M       N +T+N++I  LC   K+EEA  +   M  +G++PN
Sbjct: 367 LGKKRKVDEALTLFEAMKKDAE-PNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           ++  N++++  C+    E A ++F      S     PNSVT+  +I+G  K G V+ A  
Sbjct: 426 LLTVNIMVDRLCKAKKFEPAYEMFE---TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYR 482

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+  G + N   Y +LI  +   G  E+  ++  EM +RG  P+  + N+ +  +F
Sbjct: 483 LFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVF 542

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             GDVE    +  D+      PD  +YSIL  GL + G  ++   + + + ++    DA 
Sbjct: 543 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDAR 602

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN +++  CKS  L  A ++L  M V+ + P + TYG++IDG  K   ++ A  ++E  
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 662

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
           K    + N+++Y+S+I+G  K   +D A  +L+   + GL   + T+N+L++      +I
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            EA   F  M+ +  + N   Y+ILIN LC+   Y +A    + M   G++P+ VTYTT+
Sbjct: 723 NEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTM 782

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +   +K  +  +   L +    +G +PD  ++NA+I
Sbjct: 783 IAGLAKVGNITDACSLFERFKANGGTPDAASFNALI 818



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 265/606 (43%), Gaps = 57/606 (9%)

Query: 97  SCA-IVHLLVNWRRFDDA-------------------LLLMGNLMSANSVS-PLEFLEGL 135
           +CA +V  LV  RR DDA                    +L+G +  A      LE L  +
Sbjct: 149 ACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQM 208

Query: 136 LD-SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
            +  YE+    P +F  LVRA  + G  EGA  ++ ++K       I  +N  +    K 
Sbjct: 209 QEVGYEV--GVP-LFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKA 265

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             +   WK + E+ S G   +  ++  +I+ LCK  +L EA  L+ +M      P    +
Sbjct: 266 GNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAY 325

Query: 255 NMIINEACQVGDLEFALKLFRKM-------GVMSGDSVL--------------------- 286
           N +I      G  E A KL  ++        V+S +S+L                     
Sbjct: 326 NTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK 385

Query: 287 ---PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
              PNS T+N II+  C  G+VE A  IR  M  AG+  N+ T   ++D   +    E A
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPA 445

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             + +   +RG  PN+V Y S I  L  +G+V+ A  +  +M+D     +   Y+ L + 
Sbjct: 446 YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRN 505

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
              +G  +   K+  ++       D    N  ++ + K+ ++   + +   +   G +PD
Sbjct: 506 FFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPD 565

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           + +Y  LI G  K G       ++  MK+     +   YN++++G CK   LD A  +L+
Sbjct: 566 VRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLE 625

Query: 524 ASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             +   +   + TY ++I+G     ++ EA+ +F E ++ GI +N + Y+ LI+   K G
Sbjct: 626 EMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVG 685

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A  +++ M+  G+ P+  T+ +L+    K     E +     M     SP+  TY+
Sbjct: 686 RIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYS 745

Query: 643 AIISPL 648
            +I+ L
Sbjct: 746 ILINGL 751



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/509 (23%), Positives = 235/509 (46%), Gaps = 33/509 (6%)

Query: 20  FHVGKQFANP--STEDIVFRAICVNLR-QRKWKILEQMA-----PSL--TNSLVNRVVSE 69
           F   K+ A P  ST +I+   +C+  + +  + I ++M      P+L   N +V+R+   
Sbjct: 380 FEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKA 439

Query: 70  FRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL 129
            +  P  A E +    +     +S+ + C+++  L      DDA  L  N++        
Sbjct: 440 KKFEP--AYEMFETASQRGCNPNSV-TYCSLIDGLGKKGNVDDAYRLFENMLDTGH---- 492

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
                         A P V+ +L+R     G  E  + + +++  +G    +   N ++ 
Sbjct: 493 -------------NANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMD 539

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            + K  ++ +   +++++   G++ +V +++++I+ L K  +  E  S+++ M + G   
Sbjct: 540 CVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFAL 599

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +   +N +++  C+ G L+ A ++  +M V     V P   T+  II+G  K+ R++ A 
Sbjct: 600 DARAYNAVVDGFCKSGKLDKAYEVLEEMKV---KRVPPTVATYGSIIDGLAKIDRLDEAY 656

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +       GI+ NV  Y++LIDG+ + G  +EA  + +EM+K+GL PN   +NS +  L
Sbjct: 657 MLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDAL 716

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               ++  AL     M +    P+ +TYSIL  GLCR     +AF    ++ ++ +V + 
Sbjct: 717 VKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNV 776

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +Y  +I  L K  N+  A  L       G  PD  ++  LI+G         A  V+E 
Sbjct: 777 VTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEE 836

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            +    + N+    S+++ L K   L+ A
Sbjct: 837 TRLKGCRINVKACISLLDALNKAECLEQA 865



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 188/391 (48%), Gaps = 3/391 (0%)

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL    K+  +M V+     +PN    + +++   +  R++ AE +  AM +        
Sbjct: 127 DLAAMEKVLEEMSVLGYG--VPNPACAD-LVSALVRTRRLDDAERVIAAMRRLKFRPAFS 183

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  LI   A     E AL L  +M + G      ++ + +  L  EG VEGAL ++ ++
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD   Y++      + G V  A+K  +++  + +  D  SY  +I  LCK+  L
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRL 303

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           + A++L   M     +P    Y T+I GY   G  E A ++ + +K+    P++V +NSI
Sbjct: 304 SEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSI 363

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +  L K   +D A +L +A ++    ++ TYN +I+   + GK+ EA+ +  EM + G+ 
Sbjct: 364 LTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF 423

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N +  NI+++ LCK   ++ A E+ +     G  P+ VTY +L+    K  + ++   L
Sbjct: 424 PNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRL 483

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            ++M+ +G + +   Y ++I         ED
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKED 514



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 197/426 (46%), Gaps = 4/426 (0%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E AY++ +    +G + +   + + +  L K   +   ++L++ M+  G+  N   +  +
Sbjct: 443 EPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I       + E+   ++  M + G  P++   N  ++   + GD+E    +F  +    G
Sbjct: 503 IRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI---KG 559

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
              LP+  +++ +I+G  K G+      I +AM + G   + R Y  ++DG+ + G  ++
Sbjct: 560 YGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDK 619

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A  + +EM  + + P    Y S I  L     ++ A  +  +   K I  +   YS L  
Sbjct: 620 AYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLID 679

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G  + G + +A+ +  +++++ +  + Y++N L++ L K+  +  A     SM      P
Sbjct: 680 GFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSP 739

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +  TY  LI+G C+      A   ++ M+K    PN+V Y ++I GL K  ++  A SL 
Sbjct: 740 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF 799

Query: 523 QA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +      G  DA ++N LI G     +  EA+ +F E R  G  +N      L++ L K 
Sbjct: 800 ERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKA 859

Query: 582 GCYQQA 587
            C +QA
Sbjct: 860 ECLEQA 865


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 229/413 (55%), Gaps = 9/413 (2%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G   NV T+N+++ ALC   +LEEA+ +   M  +G  PN V +N ++   C+ G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 267 LEFA---LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           L+ A   + L R+ G     +  PN VT N ++NG CK GR+E A ++   M++ G+  +
Sbjct: 61  LDGAERVVSLMREEG-----NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 115

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y TL+ GY + G   E+L +  EM +RGL+P+ V + S IH     G++E A+ +++
Sbjct: 116 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 175

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M ++ +  +  T++ L  G C+ G +  A     ++ +  +      YN LIN  CK  
Sbjct: 176 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 235

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A++L+  M  + + PD++TY T+I GYCK GN++ A Q+ + M K    P+ + Y+
Sbjct: 236 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 295

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           S+I GLC++  L+ A  L +   ++G+  D  TY TLI+G+   G + +A ++  EM   
Sbjct: 296 SLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK 355

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           G+  + V Y++LIN L K    ++A  L+  +     +PD + Y  L+   SK
Sbjct: 356 GVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 408



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/411 (32%), Positives = 224/411 (54%), Gaps = 15/411 (3%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ G+ PNV  +N+++   C  G LE A+ +   +G M G    PN+VT+N ++  FC+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGV---VGDMRGAGCAPNAVTYNTLVAAFCR 57

Query: 302 LGRVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
            G ++ AE +   M + G    N+ T+ ++++G  + G  E A ++ DEMV+ GL P+ V
Sbjct: 58  AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 117

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN+ +      G +  +L V S+M  + + PD  T++ L    C+ G ++QA  L  Q+
Sbjct: 118 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 177

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E  +  +  ++  LI+  CK   L  A   +  M   G+ P ++ Y  LI+GYCK G +
Sbjct: 178 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 237

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           + A ++   M+    KP++V Y++II+G CK  +LD+A  L Q   + G+L DAITY++L
Sbjct: 238 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I G     ++ +A  +F  M  +G+  ++  Y  LI+  CK G  ++A  L   MI  G+
Sbjct: 298 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 357

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIEL-----HDDMVLSGVSPDNQTYNAII 645
           +PD VTY+ L+   SK+   +E   L     H+D V     PDN  Y+A++
Sbjct: 358 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV-----PDNIKYDALM 403



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 210/377 (55%), Gaps = 6/377 (1%)

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V PN  T+N ++   C  GR+E A  +   M  AG   N  TY TL+  + R G  + A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 344 LRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
            R+   M + G   PN V +NS ++ L   G +EGA  V  +M+ + + PD  +Y+ L  
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ GC+ ++  + +++ +  +V D  ++  LI+  CK+ NL  A  L++ M  RGL  
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +T+  LIDG+CK G ++ A+   E M+K   +P++V YN++ING CK   +D A+ L+
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 523 QA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +   ++R+   D +TY+T+I+GY   G +  AF +  +M   G+  + + Y+ LI  LC+
Sbjct: 245 REMEAKRVKP-DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCE 303

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
                 A EL + M+  G+ PD  TYTTL+    K  + E+ + LHD+M+  GV PD  T
Sbjct: 304 EKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVT 363

Query: 641 YNAIISPLLGEKSAEDQ 657
           Y+ +I+ L   KSA  +
Sbjct: 364 YSVLINGL--SKSARTK 378



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 241/478 (50%), Gaps = 25/478 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     F+++V    + G  EGA  V  ++  +G +  + ++N  LS   K+  +     
Sbjct: 78  KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 137

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ EM   G V +V TF  +I+A CK   LE+A++L  +M + G+  N V F  +I+  C
Sbjct: 138 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 197

Query: 263 QVGDLE---FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           + G L+    A++  RK G+       P+ V +N +ING+CKLGR++ A E+   M    
Sbjct: 198 KKGFLDDALLAVEEMRKCGIQ------PSVVCYNALINGYCKLGRMDLARELIREMEAKR 251

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V TY+T+I GY + G+ + A +L  +M+K+G++P+ + Y+S I  L  E  +  A 
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +  +M+   + PD FTY+ L  G C+ G V++A  LH++++ + ++ D  +Y++LIN L
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYG---------------TLIDGYCKGGNIEGAV 484
            KS     A +LL  +     +PD I Y                 L+ G+C  G ++ A 
Sbjct: 372 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 431

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           +VY++M     K +  +Y+ +I+G C+  ++  A S  +   R G   ++ +  +L+ G 
Sbjct: 432 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           F  G + EA     ++       +      LI+   K G      +++  M   G++P
Sbjct: 492 FEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLP 549



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 249/493 (50%), Gaps = 20/493 (4%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G + +++ +N  +  L     +     +  +M   G   N  T+N ++ A C+  +L+ A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 236 LSLYYRMLKSG-IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
             +   M + G   PN+V FN ++N  C+ G +E A K+F +M V  G  + P+ V++N 
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREG--LAPDVVSYNT 121

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +++G+CK+G +  +  +   M + G+  +V T+ +LI    + G+ E+A+ L  +M +RG
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L  N V + + I     +G ++ AL  + +M    I P    Y+ L  G C+ G +  A 
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L  ++  + +  D  +Y+ +I+  CK  NL +A QL   M+ +G++PD ITY +LI G 
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           C+   +  A +++ENM ++  +P+   Y ++I+G CK+ +++ A SL     R G+L D 
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 361

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN---------------ILINFL 578
           +TY+ LING   + +  EA  +  ++ +     + + Y+                L+   
Sbjct: 362 VTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGF 421

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C  G  ++A ++ + M+      D   Y+ L+    +  +  + +  H  M+ SG SP++
Sbjct: 422 CMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 481

Query: 639 QTYNAIISPLLGE 651
            +  +++  L  E
Sbjct: 482 TSTISLVRGLFEE 494



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 185/343 (53%), Gaps = 2/343 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M++ G+  NV TY  L+      G  EEA+ +  +M   G  PN V YN+ +      G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 375 VEGALFVLSDMIDK-HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           ++GA  V+S M ++ +  P+  T++ +  GLC+ G ++ A K+ ++++ E +  D  SYN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            L++  CK   L  +  + S M  RGL+PD++T+ +LI   CK GN+E AV +   M++ 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEA 552
             + N V + ++I+G CK   LD A   ++  ++ G+  ++  YN LINGY   G++  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  EM    +  + V Y+ +I+  CK G    A +L + M+  G++PD +TY++L+  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             +     +  EL ++M+  GV PD  TY  +I     E + E
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVE 343



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 171/309 (55%), Gaps = 2/309 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MV+ G+ PN   YN  +  L A G +E A+ V+ DM      P+  TY+ L    CR G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 410 VKQAFKLHNQVLEE-HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           +  A ++ + + EE +   +  ++N ++N LCK+  +  A+++   M+  GL PD+++Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TL+ GYCK G +  ++ V+  M +    P++V + S+I+  CK  +L+ A +L+   +  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL ++ +T+  LI+G+   G + +A     EMR  GI  + V YN LIN  CK G    A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
           REL++ M    + PD VTY+T+++ + K  + +   +L+  M+  GV PD  TY+++I  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 648 LLGEKSAED 656
           L  EK   D
Sbjct: 301 LCEEKRLND 309


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 247/490 (50%), Gaps = 4/490 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRF 200
           C  T   ++ ++    + G  E A  +   + +  G   ++  ++  +  L + +E+ + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            KL +EM   G   N  T+N ++ AL  + + +EA SL  +M  +G  P ++ F +II  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G++E A ++  +M  M    + P+ +T N +++G CK  R+  A  +    ++ G 
Sbjct: 181 LCKEGEIEAAFRVVDEM-FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV TY+TLIDG ++    +EAL+L  +MV+ G   N V Y++ +  L   G +E A+ 
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL  M D    PD  TY+ L  G  +   +++A  L  ++LE        +Y  L + LC
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE-KKPNL 499
           +S     A ++L  M  RG  P+ ITY +++DG CK G +  A+  +E M + E   P++
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y+++I+GLCK   +D A   L+   R G + D +T++ LING    G+I     +F  
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G   + V Y  L++ LC+     +A +L + M   G+ PD  T  T++    +   
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539

Query: 619 PEEVIELHDD 628
            E+   + D+
Sbjct: 540 DEDAKRIQDE 549



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 246/514 (47%), Gaps = 8/514 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + AL+    +    + AYD+ ++ + KG   ++  +N  +  L K   I     LY +M
Sbjct: 32  TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 91

Query: 208 -VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            +  G+   V T++ +I  LC++ ++++   L   M   G  PN V +N ++N     G 
Sbjct: 92  AIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGR 151

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI--RYAMIKAGIDCNV 324
            + A  L  +M   + +   P  +T   II G CK G +E A  +     MI++G+  +V
Sbjct: 152 SKEAFSLLEQM---AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDV 208

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T+ +++DG  +     +A  +    ++RG  PN V Y++ I  L     ++ AL +L+ 
Sbjct: 209 ITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAK 268

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M++     +  TYS +  GL + G ++ A  +  Q+ +   + DA +YN LI+   K   
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 328

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A  LL  M+  G  P ++TY TL  G C+ G  + AV++ + M      PN + Y+S
Sbjct: 329 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 388

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           I++GLCK   +  A    +   R  ++    I Y+ LI+G    GKI EA+     M   
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   + V ++ILIN LC  G      EL + M   G +PD VTY TLV R  +    +E 
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +L   M   G+SPD  T   +I  LL     ED
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDED 542



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/432 (30%), Positives = 232/432 (53%), Gaps = 8/432 (1%)

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I  LCK  K+++A++L+ +M+   I+P+VV +  +I+   +   ++ A  LF +     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE---AR 57

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM-IKAGIDCNVRTYATLIDGYARGGSS 340
                P  VT+N +I+G CK GR+E A  +   M I  G    V TY+TLIDG  R    
Sbjct: 58  AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEV 117

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           ++  +L +EM  RG  PN V YN+ ++ L  +G  + A  +L  M      P+  T+ ++
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177

Query: 401 TKGLCRNGCVKQAFKLHNQ--VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            KGLC+ G ++ AF++ ++  ++E  +  D  ++N +++ LCK   +  A  +    + R
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P+++TY TLIDG  K   ++ A+Q+   M ++  + N V Y+++++GL K   ++ A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +L+  +  G L DA+TYNTLI+G+F   ++ EA  +  EM   G   + V Y  L + 
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG-VSP 636
           LC+ G + +A E++  M   G  P+ +TY+++V    K     E +   + M     V+P
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 417

Query: 637 DNQTYNAIISPL 648
               Y+A+I  L
Sbjct: 418 HVIAYSALIDGL 429



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 237/501 (47%), Gaps = 41/501 (8%)

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +  L K  ++ +   L+K+MV      +V T+  +I  L K+ +++EA  L+      G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P VV +N +I+  C+ G +E AL L+  M +  G    P  VT++ +I+G C+   V+
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFG--FRPTVVTYSTLIDGLCRDHEVD 118

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
              ++   M   G   N  TY TL++     G S+EA  L ++M   G  P  + +   I
Sbjct: 119 KGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLII 178

Query: 367 HWLFAEGDVEGALFVLSD--MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
             L  EG++E A  V+ +  MI+  + PD  T++ +  GLC+   +  A  +  + LE  
Sbjct: 179 KGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              +  +Y+ LI+ L K   +  A QLL+ M+  G   + +TY T++DG  K G +E AV
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-------------------- 524
            V   M+     P+ V YN++I+G  K   L  A  LL+                     
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358

Query: 525 ------SQRIGLLD----------AITYNTLINGYFINGKIAEAFAMFSEM-RNVGIAVN 567
                  + + +LD          AITY+++++G    G++ EA   F +M R+  +A +
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ LI+ LCK G   +A E ++ MI  G IPD VT++ L+         +  +EL  
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
            M   G  PD  TY  ++  L
Sbjct: 479 GMAERGCVPDMVTYATLVDRL 499



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 141/297 (47%), Gaps = 4/297 (1%)

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L     V+ A+ +   M+DK I PD  TY  L  GL +   VK+A+ L  +   +  
Sbjct: 2   IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAV 484
                +YN +I+ LCK   +  A  L   M +  G  P ++TY TLIDG C+   ++   
Sbjct: 62  HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGC 121

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
           ++ E M      PN V YN+++N L        A SLL+     G   + IT+  +I G 
Sbjct: 122 KLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGL 181

Query: 544 FINGKIAEAFAMFSEMRNV--GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
              G+I  AF +  EM  +  G++ + + +N +++ LCK      A  + K  +  G  P
Sbjct: 182 CKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRP 241

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + VTY+TL+   SK    +E ++L   MV  G   +  TY+ ++  LL     ED V
Sbjct: 242 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 4/226 (1%)

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +I+ LCKS  +  A  L   M+ + + PD++TYG LIDG  K   ++ A  ++E  +   
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDA-ITYNTLINGYFINGKIAEA 552
             P +V YN++I+GLCK   ++ A +L    +   G     +TY+TLI+G   + ++ + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  EM   G A N V YN L+N L   G  ++A  L++ M  +G  P+ +T+  ++  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 613 FSKNCSPEEVIELHDDMVL--SGVSPDNQTYNAIISPLLGEKSAED 656
             K    E    + D+M +  SG+SPD  T+N+++  L  E+   D
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILD 226


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 261/506 (51%), Gaps = 6/506 (1%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN---SVSPL 129
            P+L L ++TW  +  + SHSLE +  I++ L + +++      +   +      SVS +
Sbjct: 11  DPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAI 70

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
            F    +     C     + D LV A  +       ++  ++    G  +S+ + N  LS
Sbjct: 71  -FHAISMSGDSFC-VNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLS 128

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            LVK +E G    +Y+EM+      NV +FN+V+  LCK  KL  A  +   M   G+ P
Sbjct: 129 GLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSP 188

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           NV+ +N +I+  C++G +    K    +  M    + PN VT+N +I+GFCK   V  A 
Sbjct: 189 NVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAM 248

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +   M + G+  NV TY  LI+G    G  +EA+ L D+MV   L PN V +N  I+  
Sbjct: 249 RVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGF 308

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
                V  A+ + +DM  + + P+  TY+ L    C++G ++ AF L+N +++  +  + 
Sbjct: 309 CKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEV 368

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YN LI  LC+  ++ AA+ L++ M+ + L  D++TY  LID  CK G    AV++ + 
Sbjct: 369 STYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDE 428

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGK 548
           M +    P+ V YN++++G C++ +L AA  +    +R G   + +T+N LI G+ + G+
Sbjct: 429 MFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGR 488

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNIL 574
           + +A  + +EM   G+  N+  Y I+
Sbjct: 489 LEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 239/484 (49%), Gaps = 17/484 (3%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF--NLVIYALCKECKLE 233
            H+       +FL   VK  +      ++  +   G    VN+   ++++ A  +  K+ 
Sbjct: 43  AHTKKYSKIRSFLDKFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKIL 102

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIIN---EACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
                + R    G   +++  N +++   +  + GD+EF   ++R+M       +  N +
Sbjct: 103 RGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEF---VYREM---IKRKIELNVI 156

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY---ARGGSSEEALRLC 347
           + N ++NG CK+G++  A ++   M   G+  NV TY TLIDGY    R G   +A  + 
Sbjct: 157 SFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAIL 216

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EMV +G+ PN V YN  I     + +V GA+ V  +M  + + P+  TY+IL  GLC +
Sbjct: 217 KEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSD 276

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V +A  L +Q++   +  +  ++N+LIN  CK+  +  A  L + M  +G+ P+ +TY
Sbjct: 277 GKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY 336

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--AS 525
            TLID YCK G +E A  +Y  M      P +  YN +I GLC+   + AA+SL+    S
Sbjct: 337 TTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS 396

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +++   D +TYN LI+     G+  +A  +  EM   G+  + V YN L++  C+ G  +
Sbjct: 397 KKLSA-DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLR 455

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  +   M   G   + VT+  L+  F      E+   L ++M+  G+ P+  TY  I 
Sbjct: 456 AALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIK 515

Query: 646 SPLL 649
             ++
Sbjct: 516 EEMM 519



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 4/283 (1%)

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A+F    M     C +     +L     RN  + + F+   +  +        S N L++
Sbjct: 69  AIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLS 128

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            L K +     + +   MI R +  ++I++  +++G CK G +  A  V E+MK     P
Sbjct: 129 GLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSP 188

Query: 498 NLVIYNSIINGLCKDASLDA---AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
           N++ YN++I+G CK   +     A ++L+     G+  + +TYN LI+G+  +  ++ A 
Sbjct: 189 NVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAM 248

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +F EM+  G+  N V YNILIN LC  G   +A  L   M+   + P+ VT+  L+  F
Sbjct: 249 RVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGF 308

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            KN +  E I L +DM   GV P+  TY  +I     +   ED
Sbjct: 309 CKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMED 351



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 11/255 (4%)

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN------EIGRFWKLYKEMVSCGYVEN 215
           ++G  D  + + ++   VS     N ++H V +N       +     L+ +M   G   N
Sbjct: 275 SDGKVD--EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPN 332

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
             T+  +I A CK+ ++E+A +LY  M+  GI+P V  +N +I   C+ GD++ A  L  
Sbjct: 333 AMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL-- 390

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            M  M    +  + VT+N +I+  CK G    A ++   M + G++ +  TY TL+DGY 
Sbjct: 391 -MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYC 449

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           R G+   AL +   M ++G   N V +N  I     +G +E A  +L++M+++ + P+  
Sbjct: 450 REGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRT 509

Query: 396 TYSILTKGLCRNGCV 410
           TY I+ + +   G V
Sbjct: 510 TYEIIKEEMMEKGFV 524



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 4/204 (1%)

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G    +I+   L+ G  K         VY  M K + + N++ +N ++NGLCK   L+ A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF---AMFSEMRNVGIAVNKVGYNIL 574
             +++  +  G+  + ITYNTLI+GY   G+I + +   A+  EM   GI  N+V YNIL
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I+  CK      A  +   M   G+ P+ VTY  L+     +   +E + L D MV S +
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294

Query: 635 SPDNQTYNAIISPLLGEKSAEDQV 658
            P+  T+N +I+     K+  + +
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAI 318


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/537 (29%), Positives = 261/537 (48%), Gaps = 40/537 (7%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T A    LV    + G  + AY+++ K+   G   ++  +N  ++ L K  ++ +   LY
Sbjct: 329 TEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLY 388

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             M       N  T++++I + C+  +L+ A+S + RM++ GI   V  +N +IN  C+ 
Sbjct: 389 SNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKF 448

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           GDL  A  LF +M   +   V P + T   +I+G+CK  +V+ A ++   MI  GI  NV
Sbjct: 449 GDLSAAESLFIEM---TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNV 505

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T+  LI G        EA  L DE+V+R + P  V YN  I     +G ++ A  +L D
Sbjct: 506 YTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLED 565

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M  K + PD +TY  L  GLC  G V +A    + + ++++  +   Y+ L++  C+   
Sbjct: 566 MHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR 625

Query: 445 L---------------------------AAAKQ--------LLSSMIVRGLIPDIITYGT 469
           L                            A KQ        LL  M  +GL PD + Y +
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTS 685

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           +ID Y K G+ + A + ++ M   E  PN+V Y +++NGLCK   +D A  L +  Q   
Sbjct: 686 MIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN 745

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  ++ITY   ++     G + EA  +   M   G+  N V +NI+I   CK G + +A 
Sbjct: 746 VPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEAT 804

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +++  M  +GI PD VTY+TL+  + ++ +    ++L D M+  G+ PD   YN +I
Sbjct: 805 KVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLI 861



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 173/649 (26%), Positives = 301/649 (46%), Gaps = 44/649 (6%)

Query: 45  QRKWKIL---EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           ++ WK+      ++ +L    V +V+       KLAL F+ ++G +   +HS  S   +V
Sbjct: 51  KQSWKVAFNDASISSTLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMV 110

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALVRACTQIG 160
           H LV+ R F  A  L+  L+   S  P       LDSY+ CK +  + F+ LV+      
Sbjct: 111 HALVHSRLFWPANSLLHTLLLRES-HPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSS 169

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
               A  +++ +        +   +  L+ L+K+ +    W+L+ E V+ G   +  T +
Sbjct: 170 RIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCS 229

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            V+ ++C+      A      M  +G   ++V +N++I+  C+   +  A+++ R +G  
Sbjct: 230 AVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLG-- 287

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
            G  +  + VT+  ++ GFC+L + E   ++   M++ G        + L+DG  + G  
Sbjct: 288 -GKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKI 346

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           ++A  L  ++ + G +PN  VYN+ I+ L   GD++ A  + S+M   ++ P+  TYSIL
Sbjct: 347 DDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSIL 406

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               CR+G +  A    ++++++ +    Y+YN LIN  CK  +L+AA+ L   M  +G+
Sbjct: 407 IDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGV 466

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P   T+ +LI GYCK   ++ A ++Y  M      PN+  + ++I+GLC    +  A  
Sbjct: 467 EPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASE 526

Query: 521 LL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L  +  +R      +TYN LI GY  +GKI +AF +  +M   G+  +   Y  LI+ LC
Sbjct: 527 LFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLC 586

Query: 580 KFG----------------------CYQ-------QARELMKV------MILHGIIPDYV 604
             G                      CY        Q   LM+       MI  GI  D V
Sbjct: 587 STGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLV 646

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
            +  L+    K    +   +L  DM   G+ PDN  Y ++I     E S
Sbjct: 647 CHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 300/610 (49%), Gaps = 28/610 (4%)

Query: 60  NSLVNRVVSEFRKS-PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMG 118
           NSL++ ++   R+S PK     +    +  +FS +L  +  + + +++ R FD  +++  
Sbjct: 123 NSLLHTLL--LRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIV-- 178

Query: 119 NLMSANSVSP-----LEFLEGLLDSYEI--------------CKATPAVFDALVRACTQI 159
            LM AN++ P        L GLL   +                +  P    A+VR+  ++
Sbjct: 179 KLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCEL 238

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                A + I+ ++  G  +SI  +N  +  L K + +    ++ + +   G   +V T+
Sbjct: 239 KDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTY 298

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             ++   C+  + E  + L   M++ G  P     + +++   + G ++ A +L  K+G 
Sbjct: 299 CTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGR 358

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                 +PN   +N +IN  CK G ++ AE +   M    +  N  TY+ LID + R G 
Sbjct: 359 FG---FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGR 415

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            + A+   D M++ G+      YNS I+     GD+  A  +  +M +K + P   T++ 
Sbjct: 416 LDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTS 475

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C++  V++AFKL+N++++  +  + Y++  LI+ LC +N +A A +L   ++ R 
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           + P  +TY  LI+GYC+ G I+ A ++ E+M +    P+   Y  +I+GLC    +  AK
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             +    +  + L+ + Y+ L++GY   G++ EA +   EM   GI ++ V + +LI+  
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K    +   +L+K M   G+ PD V YT+++  +SK  S ++  E  D MV     P+ 
Sbjct: 656 LKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNV 715

Query: 639 QTYNAIISPL 648
            TY A+++ L
Sbjct: 716 VTYTALMNGL 725



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 277/589 (47%), Gaps = 23/589 (3%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           ++  S T + V+ +V   RK  K+  A E    VG    F  +L    A+++ L      
Sbjct: 323 ELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG-FVPNLFVYNALINSLCKGGDL 381

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           D A LL  N MS  ++ P     G+  +Y I      + D+  R+    G  + A     
Sbjct: 382 DKAELLYSN-MSLMNLRP----NGI--TYSI------LIDSFCRS----GRLDVAISYFD 424

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++   G   +++A+N+ ++   K  ++     L+ EM + G      TF  +I   CK+ 
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL 484

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++++A  LY +M+ +GI PNV  F  +I+  C    +  A +LF ++       + P  V
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDEL---VERKIKPTEV 541

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +I G+C+ G+++ A E+   M + G+  +  TY  LI G    G   +A    D++
Sbjct: 542 TYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            K+ +  N + Y++ +H    EG +  AL    +MI + I  D   +++L  G  +    
Sbjct: 602 HKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDR 661

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  F L   + ++ +  D   Y  +I+   K  +   A +    M+     P+++TY  L
Sbjct: 662 KTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTAL 721

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++G CK G ++ A  +++ M+     PN + Y   ++ L K+ ++  A  L  A  +  L
Sbjct: 722 MNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLL 781

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + +T+N +I G+   G+  EA  + SEM   GI  + V Y+ LI   C+ G    + +L
Sbjct: 782 ANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKL 841

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
              M+  G+ PD V Y  L+     N   ++  EL DDM+  G+ PDN+
Sbjct: 842 WDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 247/512 (48%), Gaps = 4/512 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    +      A +V + L  KG +  +  +   +    +L +     +L  EM
Sbjct: 262 TYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEM 321

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+       + ++  L K+ K+++A  L  ++ + G  PN+  +N +IN  C+ GDL
Sbjct: 322 VELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDL 381

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L+  M +M+   + PN +T++ +I+ FC+ GR++ A      MI+ GI   V  Y
Sbjct: 382 DKAELLYSNMSLMN---LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY 438

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI+G  + G    A  L  EM  +G+ P    + S I     +  V+ A  + + MID
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I P+ +T++ L  GLC    + +A +L ++++E  +     +YN+LI   C+   +  
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL  M  +GL+PD  TY  LI G C  G +  A    +++ K   K N + Y+++++
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618

Query: 508 GLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G C++  L +A  +  +  QR   +D + +  LI+G          F +  +M + G+  
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRP 678

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V Y  +I+   K G +++A E   +M+     P+ VTYT L+    K    +    L 
Sbjct: 679 DNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLF 738

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             M  + V P++ TY   +  L  E + ++ +
Sbjct: 739 KRMQAANVPPNSITYGCFLDNLTKEGNMKEAI 770



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 106/265 (40%), Gaps = 19/265 (7%)

Query: 411 KQAFKLHNQV-LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP------- 462
           K A +  N + L ++M     SY I+++ L  S     A  LL ++++R   P       
Sbjct: 84  KLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHF 143

Query: 463 ----------DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
                       + +  L+  Y     I  AV + + M      P +   ++++NGL K 
Sbjct: 144 LDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKV 203

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
                   L   S   G+  D  T + ++           A      M   G  ++ V Y
Sbjct: 204 RKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTY 263

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N+LI+ LCK     +A E+ + +   G+  D VTY TLV  F +    E  I+L D+MV 
Sbjct: 264 NVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVE 323

Query: 632 SGVSPDNQTYNAIISPLLGEKSAED 656
            G SP     + ++  L  +   +D
Sbjct: 324 LGFSPTEAAVSGLVDGLRKQGKIDD 348


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 257/506 (50%), Gaps = 9/506 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVS---IHAWNNFLSHLVKLNEIGRFWKLY 204
           V  ALV  C      E A   + ++ V+G  +    +  WN  +    K+ ++     + 
Sbjct: 153 VSTALVGLCRTGLVGEAA--ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVV 210

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           + M + G   +V  +N ++         + AL +  RM   G+ PNVV +  +I E C+ 
Sbjct: 211 ERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKG 270

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             ++ A  L+  M V SG  VLP+ VT + +++G C+ G+   A  +   M K G+  N 
Sbjct: 271 KGMDEAFSLYEGM-VRSG--VLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNH 327

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY TLID  A+     E+L L  EMV RG++ + V+Y + +  L  EG +E A  VL  
Sbjct: 328 VTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRH 387

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
               +I P+  TY++L    CR G +  A ++  Q+ E+ ++ +  +++ +IN L K   
Sbjct: 388 AQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGC 447

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A   +  M   G+ P+++TYGTLIDG+ K    E A+ VY +M     + N  + +S
Sbjct: 448 LGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDS 507

Query: 505 IINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           ++NGL K+ +++ A++L +     G LLD + Y TL++G F  G +  AF +  E+    
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           ++ + V YN+ IN LC  G + +A+  +K M   G+ PD  TY T++    +     + +
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLL 649
           +L  +M  + + P+  TY  ++  LL
Sbjct: 628 KLLKEMKRNSIKPNLITYTTLVVGLL 653



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 247/502 (49%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              ALV    + G    AY + +++   G + +   +   +  L K         L  EM
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G V ++  +  ++  L KE K+EEA  +        I PN V + ++++  C+ G++
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNI 413

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M      SV+PN VT + IING  K G +  A +    M  +GI  NV TY
Sbjct: 414 DGAEQVLLQM---EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTY 470

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG+ +    E AL +  +M+  G+  NN V +S ++ L   G++EGA  +  DM +
Sbjct: 471 GTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDE 530

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  DH  Y+ L  GL + G +  AFK+  +++E+++  DA  YN+ IN LC     + 
Sbjct: 531 RGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSE 590

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK  L  M   GL PD  TY T+I   C+ G    A+++ + MK+   KPNL+ Y +++ 
Sbjct: 591 AKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVV 650

Query: 508 GLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL +   +  AK LL      G    ++T+  ++     + +      +   M   G+  
Sbjct: 651 GLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHA 710

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN L++ LC  G  + A  ++  M+  GI PD +T+  L+    K+   +    ++
Sbjct: 711 DITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIY 770

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
             M+  G+SP+  T+N ++  L
Sbjct: 771 AQMLHQGLSPNIATFNTLLGGL 792



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 153/598 (25%), Positives = 265/598 (44%), Gaps = 51/598 (8%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY----EICKA--------- 144
           C ++  L   RR  ++L L+G ++S   V  L     L+D      +I +A         
Sbjct: 331 CTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQS 390

Query: 145 ---TP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
              TP    +  LV A  + G  +GA  V+ +++ K    ++  +++ ++ LVK   +G+
Sbjct: 391 DNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGK 450

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
                ++M   G   NV T+  +I    K    E AL +Y  ML  G+  N    + ++N
Sbjct: 451 AADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVN 510

Query: 260 EACQVGDLEFALKLFRKMG-------------VMSG-------------------DSVLP 287
              + G++E A  LF+ M              +M G                    ++ P
Sbjct: 511 GLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSP 570

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++V +N  IN  C LG+   A+     M   G++ +  TY T+I    R G + +AL+L 
Sbjct: 571 DAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLL 630

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM +  + PN + Y + +  L   G V+ A F+L++M      P   T+  + +    +
Sbjct: 631 KEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGS 690

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
                  ++H  ++   +  D   YN L++ LC       A  +L  M+ RG+ PD IT+
Sbjct: 691 RRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITF 750

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI G+CK  +++ A  +Y  M      PN+  +N+++ GL     +  A ++L   ++
Sbjct: 751 NALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKK 810

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           +GL  + +TY+ L+ GY       EA  ++ EM + G       YN L++   K G   Q
Sbjct: 811 VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQ 870

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           A+EL   M   G++    TY  L+  +SK  +  EV  L  DM   G  P   T +++
Sbjct: 871 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSM 928



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 217/468 (46%), Gaps = 9/468 (1%)

Query: 133 EGLLDSY-----EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           E  LD Y     E  +A   V D+LV    + G  EGA  + + +  +G  +    +   
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +  L K   +   +K+ +E++      +   +N+ I  LC   K  EA S    M  +G+
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+   +N +I   C+ G    ALKL ++M     +S+ PN +T+  ++ G  + G V+ 
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEM---KRNSIKPNLITYTTLVVGLLEAGVVKK 660

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A+ +   M  AG      T+  ++   +     +  L + + M+  GL  +  VYN+ +H
Sbjct: 661 AKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVH 720

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G    A  VL +M+ + I PD  T++ L  G C++  +  AF ++ Q+L + +  
Sbjct: 721 VLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSP 780

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  ++N L+  L  +  +  A  +LS M   GL P+ +TY  L+ GY K  N   A+++Y
Sbjct: 781 NIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLY 840

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
             M      P    YNS+++   K   ++ AK L    +R G+L  + TY+ L+NG+   
Sbjct: 841 CEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKL 900

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
               E   +  +M+ +G   +K   + +     + G   +AR L+K +
Sbjct: 901 RNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 3/291 (1%)

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + V YN  +  L  +G    A  VLS+M  + +  D  T S    GLCR G V +A  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 418 NQVLEEHMVG--DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
             ++    +   D   +N LI+  CK  ++AAA  ++  M  +G+  D++ Y +L+ G+ 
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFF 233

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
             G+ + A++V E MK    +PN+V Y ++I   CK   +D A SL +   R G+L D +
Sbjct: 234 HSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVV 293

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T + L++G   +G+ +EA+A+F EM  +G+A N V Y  LI+ L K     ++  L+  M
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +  G++ D V YT L+ R  K    EE  ++        ++P+  TY  ++
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLV 404



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 159/347 (45%), Gaps = 3/347 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A ++ ++ A  + G T  A  +++++K      ++  +   +  L++   + +   L  E
Sbjct: 608 ATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNE 667

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M S G+     T   V+ A     + +  L ++  M+ +G+  ++  +N +++  C  G 
Sbjct: 668 MASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGM 727

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A  +  +M +  G  + P+++T N +I G CK   ++ A  I   M+  G+  N+ T
Sbjct: 728 ARNATVVLDEM-LTRG--IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIAT 784

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + TL+ G    G   EA  +  +M K GL PNN+ Y+  +     + +   AL +  +M+
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 844

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K   P   TY+ L     + G + QA +L +++    ++  + +Y+IL+N   K  N  
Sbjct: 845 SKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGI 904

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
             + LL  M   G  P   T  ++   + + G    A ++ + + KV
Sbjct: 905 EVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 3/227 (1%)

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  D  SYNI +  L +  +   A  +LS M  RG+  D +T  T + G C+ G +  A 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 485 QVYENMKKVEKKPNL--VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
            + E + +      L  V +N++I+G CK   + AA ++++     G+ LD + YN+L+ 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G+F +G    A  +   M+  G+  N V Y  LI   CK     +A  L + M+  G++P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D VT + LV    ++    E   L  +M   GV+P++ TY  +I  L
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSL 337



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 76/186 (40%), Gaps = 44/186 (23%)

Query: 503 NSIINGLCKDASLDAAKSLLQ-------------------------ASQRIGLL------ 531
           NSII   C   SL  A SLL+                         + Q  G L      
Sbjct: 80  NSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLAPPVLS 139

Query: 532 ---------DAITYNTLINGYFINGKIAEAFAMFSEM--RNVGI-AVNKVGYNILINFLC 579
                    D +T +T + G    G + EA A+ +EM  R  GI  ++ VG+N LI+  C
Sbjct: 140 EMCKRGVSWDGVTVSTALVGLCRTGLVGEAAAL-AEMLVRGRGIDGLDVVGWNALIDGYC 198

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K      A  +++ M   G+  D V Y +LV  F  +   +  +E+ + M   GV P+  
Sbjct: 199 KVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVV 258

Query: 640 TYNAII 645
           TY A+I
Sbjct: 259 TYTALI 264


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/408 (33%), Positives = 217/408 (53%), Gaps = 3/408 (0%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           +  +G  P+   +N  +      GDL  A+ + R+MG     +  PN+ ++N +I G  +
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMG--RDGAPPPNAFSYNVVIAGMWR 75

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A E+   M +  +  N  TY T+IDG+ +GG  E   RL D+MV  GL PN + 
Sbjct: 76  AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAIT 135

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  +  L   G +     +L +M  + + PD FTYSIL  GL RNG  K    L  + L
Sbjct: 136 YNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL 195

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  +    Y+ +IL+N LCK   ++ A+++L S++  GL+P  + Y TLI+GYC+ G +E
Sbjct: 196 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 255

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLI 540
           GA   +  MK    KP+ + YN++INGLCK   +  A+ LL   Q  G+   + T+NTLI
Sbjct: 256 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 315

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           + Y   G++ + F + SEM+  G+  N V Y  ++N  CK G   +A  ++  M    ++
Sbjct: 316 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 375

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+   Y  ++  + ++   ++   L + M  +G+SP   TYN +I  L
Sbjct: 376 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 243/481 (50%), Gaps = 5/481 (1%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKEC 230
           L   G      AWN  +   V   ++G    + + M   G    N  ++N+VI  + +  
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +  +A+ ++  M +  + PN + +N +I+   + GDLE   +L  +M V  G  + PN++
Sbjct: 78  RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM-VCHG--LKPNAI 134

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +++G C+ GR+     +   M    +  +  TY+ L DG +R G S+  L L  + 
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +K G+   +   +  ++ L  +G V  A  VL  +++  + P    Y+ L  G C+ G +
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           + AF    Q+   H+  D  +YN LIN LCK+  +  A+ LL  M   G+ P + T+ TL
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIG 529
           ID Y + G +E    V   M++   KPN+V Y SI+N  CK+  +  A ++L     +  
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 374

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           L +A  YN +I+ Y  +G   +AF +  +M++ GI+ + V YN+LI  LC      +A E
Sbjct: 375 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 434

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++  +  H +IPD V+Y TL++      + ++ ++L   M   G+    +TY+ +IS L 
Sbjct: 435 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 494

Query: 650 G 650
           G
Sbjct: 495 G 495



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 220/451 (48%), Gaps = 10/451 (2%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +   +K  ++   ++L  +MV  G   N  T+N+++  LC+  ++ E  +L   M 
Sbjct: 101 YNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 160

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFC 300
              + P+   ++++ +   + GD +  L LF K    GV  GD       T + ++NG C
Sbjct: 161 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD------YTCSILLNGLC 214

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G+V  AEE+  +++ AG+      Y TLI+GY + G  E A     +M  R + P+++
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 274

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN+ I+ L     +  A  +L +M D  + P   T++ L     R G +++ F + +++
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E  +  +  SY  ++N  CK+  +  A  +L  M  + ++P+   Y  +ID Y + G  
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 394

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           + A  + E MK     P++V YN +I GLC  + +  A+ ++ +     L+ DA++YNTL
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 454

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+     G I +A  +   M   GI      Y+ LI+ L   G   +   L + M+ + +
Sbjct: 455 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 514

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +P    +  +V  +SK  +  +  +L  +M+
Sbjct: 515 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 545



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 5/329 (1%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E L+ L+++  +   T  +++ L+    Q G  EGA+    ++K +        +N  ++
Sbjct: 224 EVLQSLVNAGLV--PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K   I     L  EM   G    V TFN +I A  +  +LE+   +   M ++G+ P
Sbjct: 282 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 341

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           NVV +  I+N  C+ G +  A+ +      M    VLPN+  +N II+ + + G  + A 
Sbjct: 342 NVVSYGSIVNAFCKNGKIPEAVAILDD---MFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +   M   GI  ++ TY  LI G        EA  + + +    L+P+ V YN+ I   
Sbjct: 399 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 458

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G+++ AL +   M    I     TY  L  GL   G + +   L+ ++++ ++V   
Sbjct: 459 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN 518

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVR 458
             +NI++    K  N   A+ L   M+ +
Sbjct: 519 AIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 288/592 (48%), Gaps = 12/592 (2%)

Query: 56  PSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           P+L  + +  VV + R +P  AL F+ W        H ++S C I H+L+  R FD A  
Sbjct: 51  PNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATR 110

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPA-VFDALVRACTQIGATEGAYDVIQKLKV 174
           +   ++       LE L     S+    + P+ V+  L+    + G  + A D    +  
Sbjct: 111 VFDRMVG--QFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSK 168

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G S+S +A +  L  L+  + I    + Y+EM      + +  +  V  +  K  ++E+
Sbjct: 169 MGVSISHYAASEMLDLLIDSDRIDVILENYEEMC-----KGLGVYEFVFNSFLKRGEVEK 223

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            L+ +  +++ G+ P +V  N I+   C    +  A   F  M V SG S  PN VT + 
Sbjct: 224 GLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM-VRSGPS--PNLVTFST 280

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +IN +CK  R++ A  +   MI+ GI  ++  Y+ LI+G  R G  EE   L    + RG
Sbjct: 281 LINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARG 340

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           +  + V+++S +      GD+  A+ V + M+ + I P+  TYSIL  GLCRNG V +A 
Sbjct: 341 VKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEAC 400

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +  Q+L++ +     +Y+ LI+  CKS NL     L   M+ +G +PD++    LI+G 
Sbjct: 401 GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGL 460

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDA 533
            + G ++ A++ +    K     N  ++N++I+G  +   + D  K  +       + D 
Sbjct: 461 SRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDV 520

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TY  L+ G    G++ EA A+F ++   G + + + Y  LI+  CK        ++ K+
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKL 580

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           M  +GI PD   Y  L+  F +    E V+EL  +++  G+ PD  TYN +I
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 221/454 (48%), Gaps = 11/454 (2%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DA + +G+L  A  V      EG+             +  L+    + G    A  V  +
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGI-------SPNVVTYSILINGLCRNGRVLEACGVFGQ 405

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +  +G   S+  +++ +    K   +   + LY  M+  G+V +V   +++I  L ++  
Sbjct: 406 ILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGM 465

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++EAL  +++ +K G+  N   FN +I+   ++      LK++  MG+     V+P+ VT
Sbjct: 466 MDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK---VIPDVVT 522

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  ++ G  + GR++ A  + + ++K G   +   Y TLIDG+ +       L++   M 
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G+ P+  +YN  I+  F EG VE  L +L ++I   + PD  TY+ +  G C      
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFS 642

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A KL   +       +A ++ ILI+  CK   +  A  + SSM+ RG  P+I+TY  LI
Sbjct: 643 KAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLI 702

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGL 530
           DGY K  N E A ++YE M      PN+V Y+ +I+GLCK   ++ A    Q A  R  L
Sbjct: 703 DGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLL 762

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
            D I Y  LI GY   G++AEA  ++  M   GI
Sbjct: 763 PDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 163/347 (46%), Gaps = 38/347 (10%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+   ++ G  + A     +   +G +++ + +N  +    +L       K+Y  M    
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK 515

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            + +V T+ +++  L ++ +L+EAL+L++++LK G  P+ + +  +I+  C+  D    L
Sbjct: 516 VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGL 575

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT-- 329
           ++F+   +M  + + P+   +N +IN F + G VE   E+   +IK G++ ++ TY T  
Sbjct: 576 QIFK---LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632

Query: 330 ---------------------------------LIDGYARGGSSEEALRLCDEMVKRGLM 356
                                            LID Y + G  ++A+ +   M++RG  
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           PN + Y+  I   F   + E A  +   M+   + P+  +YSIL  GLC+ G +++A   
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLA 752

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
               +  H++ D  +Y ILI   CK   LA A  L   M+V G++PD
Sbjct: 753 FQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 5/298 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K  P V  +  LV+   + G  + A  +  +L  KG S     +   +    K  +    
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATG 574

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +++K M S G   ++  +N++I    +E  +E  L L   ++K G+ P++V +N +I  
Sbjct: 575 LQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICG 634

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C +     A+KLF    V+      PN++T   +I+ +CK GR++ A  I  +M++ G 
Sbjct: 635 YCSLKIFSKAIKLFE---VLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGP 691

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + N+ TY+ LIDGY +  ++E A  L ++M+   + PN V Y+  I  L  +G +E A  
Sbjct: 692 EPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASL 751

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
                I +H+ PD   Y IL +G C+ G + +A  L++ +L   ++ D      L  Y
Sbjct: 752 AFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEY 809



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 21/258 (8%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           LM +N + P           +IC     +++ L+    + G  E   ++++++   G   
Sbjct: 580 LMQSNGIFP-----------DIC-----IYNVLINMFFREGCVENVLELLREIIKYGLEP 623

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSL 238
            I  +N  +     L    +  KL+ E++ CG  + N  TF ++I A CK+ ++++A+ +
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           +  ML+ G  PN++ ++ +I+   +  + E A +L+ KM    GD V PN V+++ +I+G
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM---LGDRVSPNIVSYSILIDG 739

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK G +E A       I   +  +V  Y  LI GY + G   EA+ L D M+  G+MP+
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799

Query: 359 NVVYNSTIHWLFAEGDVE 376
           +++  +   + F +   +
Sbjct: 800 DLLQKALAEYGFQDSQAK 817


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 240/440 (54%), Gaps = 2/440 (0%)

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
           C  + ++++ NL++ +L    +  +  + +  ++ +G  P+   +N ++      GDL+ 
Sbjct: 116 CSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDV 175

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL + R+MG   G +  P++ ++N +I G  + G+   A ++   M+  G+  N  TY T
Sbjct: 176 ALAMVRRMGRSEG-APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNT 234

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +IDG+ +GG  E   RL D+M+  G  PN V YN  +  L   G ++    ++ +M    
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 294

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD FTYSIL  GL R G  +    L  + L++ ++  AY+ +IL+N LCK   +A A+
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 354

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           Q+L  ++  GL+P  + Y TLI+GYC+  ++ GA  ++E MK    +P+ + YN++INGL
Sbjct: 355 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 510 CKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   +  A+ L+   ++ G+  ++ T+NTLI+ Y   G++ + F + S+M+  GI  + 
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           + +  ++   CK G   +A  ++  MI   + P+   Y +++  + ++   E+   L + 
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEK 534

Query: 629 MVLSGVSPDNQTYNAIISPL 648
           M  SGVS    TYN ++  L
Sbjct: 535 MKNSGVSASIVTYNLLLKGL 554



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 246/522 (47%), Gaps = 8/522 (1%)

Query: 140 EICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           E+C   P++   + L+ +   +G           L   G      AWN  +   V   ++
Sbjct: 114 EVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDL 173

Query: 198 GRFWKLYKEMVSCGYVENVNTF--NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
                + + M         + F  N+VI  L +  K  +AL ++  M+  G+ PN + +N
Sbjct: 174 DVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYN 233

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I+   + GDLE     FR    M  D   PN VT+N +++G C+ GR++    +   M
Sbjct: 234 TMIDGHVKGGDLEAG---FRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEM 290

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
               +  +  TY+ L DG  R G S   L L  E +K+G+M      +  ++ L  +G V
Sbjct: 291 ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  VL  ++   + P    Y+ L  G C+   ++ AF +  Q+   H+  D  +YN L
Sbjct: 351 AKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           IN LCK   +  A+ L+  M   G+ P + T+ TLID Y   G +E    V  +M++   
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFA 554
           K +++ + S++   CK+  +  A ++L     +    +A  YN++I+ Y  +G   +AF 
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 530

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  +M+N G++ + V YN+L+  LC+     +A EL+  +   G+ PD V+Y T+++   
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                ++ +EL  +M   G+ P  +TY+ ++S L       D
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 250/507 (49%), Gaps = 8/507 (1%)

Query: 144 ATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA--WNNFLSHLVKLNEIGR 199
           A P  F  + +V+AC   G  + A  +++++     +    A  +N  ++ L +  +   
Sbjct: 153 ARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSD 212

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             K++ EMV  G V N  T+N +I    K   LE    L  +ML  G  PN+V +N++++
Sbjct: 213 ALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLS 272

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G ++    L   M  M+  S+ P+  T++ + +G  + G       +    +K G
Sbjct: 273 GLCRAGRMDETRVL---MDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKG 329

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +     T + L++G  + G   +A ++ + +V  GL+P  V+YN+ I+      D+ GA 
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAF 389

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   M  +HI PDH TY+ L  GLC+   V +A  L  ++ +  +     ++N LI+  
Sbjct: 390 CIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAY 449

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
             +  L     +LS M  +G+  D+I++G+++  +CK G I  AV + ++M   +  PN 
Sbjct: 450 GTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNA 509

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
            +YNSII+   +    + A  L++  +  G+  +I TYN L+ G   + +I EA  +   
Sbjct: 510 QVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYT 569

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           +RN G+  + V YN +I+  C  G   +A EL++ M  +GI P   TY TLV+  +    
Sbjct: 570 LRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR 629

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
             ++  L+  M+   V P +  Y  ++
Sbjct: 630 VHDMECLYQQMLHKNVEPSSSIYGIMV 656



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 194/378 (51%), Gaps = 4/378 (1%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +  E      L+ E +  G +    T ++++  LCK+ K+ +A  +   ++ +G+ P 
Sbjct: 309 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 368

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
            V +N +IN  CQV DL  A  +F +M       + P+ +T+N +ING CKL  V  AE+
Sbjct: 369 TVIYNTLINGYCQVRDLRGAFCIFEQM---KSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M K+G+D +V T+ TLID Y   G  E+   +  +M ++G+  + + + S +    
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A+ +L DMI K + P+   Y+ +      +G  +QAF L  ++    +     
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 545

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN+L+  LC+S+ +  A++L+ ++  +GL PD+++Y T+I   C  G+ + A+++ + M
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKI 549
            K   +P L  Y+++++ L     +   + L Q      +  + + Y  +++ Y      
Sbjct: 606 NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEND 665

Query: 550 AEAFAMFSEMRNVGIAVN 567
           ++  ++  EM   GIA +
Sbjct: 666 SKVASLKKEMSEKGIAFD 683



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 3/319 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T  +++ L+    Q+    GA+ + +++K +        +N  ++ L KL  + +   L 
Sbjct: 368 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 427

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            EM   G   +V TFN +I A     +LE+  ++   M + GI  +V+ F  ++   C+ 
Sbjct: 428 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 487

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G +  A+ +   M       V PN+  +N II+ + + G  E A  +   M  +G+  ++
Sbjct: 488 GKIPEAVAILDDMIY---KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 544

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  L+ G  R    +EA  L   +  +GL P+ V YN+ I     +GD + AL +L +
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M    I P   TY  L   L   G V     L+ Q+L +++   +  Y I+++   +  N
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664

Query: 445 LAAAKQLLSSMIVRGLIPD 463
            +    L   M  +G+  D
Sbjct: 665 DSKVASLKKEMSEKGIAFD 683


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 230/419 (54%), Gaps = 9/419 (2%)

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           R+  S   PNV  F ++I    ++G +E AL ++ KM       VLP     N +++G  
Sbjct: 118 RLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM------DVLPAMQACNMVLDGLV 169

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K GR +   ++   M+  G   NV TY TLIDG  R G   +A RL DEM+++ + P  V
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +Y   I  L  E  +  A  +   M +  + P+ +TY+ +  G C+   VK+A +L+ ++
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           L + ++ +  ++ ILI+ LCK++ + +A++ L  M   G++P+I  Y  LIDGYCK GN+
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
             A+ ++  ++K E  P++  Y+ +I GLC    ++ A  LLQ  ++ G L +A+TYNTL
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GY   G + +A  + S+M   GI  N + ++ LI+  CK G  + A  L   M++ G+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +PD V YT L+    K+ + +E   LH +M  +G+ P+  T + +I  L  +    D +
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 248/524 (47%), Gaps = 46/524 (8%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
           ++   ALE +  V      + + +   AI+H+L   + +  A  LM +L+     S    
Sbjct: 48  RTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSR 107

Query: 132 L----EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           +      +L   E  K TP VF  L+ A +++G  E A  V  K+ V     ++ A N  
Sbjct: 108 ICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLP---AMQACNMV 164

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L  LVK       WK+                                   Y  M+  G 
Sbjct: 165 LDGLVKKGRFDTMWKV-----------------------------------YGDMVARGA 189

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            PNVV +  +I+  C+ GD    LK FR    M    + P  V +  +I G C   R+  
Sbjct: 190 SPNVVTYGTLIDGCCRQGDF---LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISE 246

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           AE +   M  +G+  N+ TY T++DGY +    ++AL L  EM+  GL+PN V +   I 
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L    ++  A   L DM    + P+ F Y+ L  G C+ G + +A  LH+++ +  ++ 
Sbjct: 307 GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP 366

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D ++Y+ILI  LC  + +  A  LL  M  +G +P+ +TY TLIDGYCK GN+E A++V 
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
             M +   +PN++ ++++I+G CK   ++AA  L       GLL D + Y  LI+G+F +
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           G   EAF +  EM+  G+  N    + LI+ LCK G    A +L
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 299/613 (48%), Gaps = 23/613 (3%)

Query: 46  RKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
           +K   L ++ PSLT S V+ + + F   P+ AL F+ W+     F H++ S  +++++L+
Sbjct: 54  QKHPSLRKLLPSLTPSHVSSLFA-FNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILI 112

Query: 106 NWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA----VFDALVRACTQIGA 161
             R     LL +   +  + +     +E +L   E+ +   A     F   +R    I  
Sbjct: 113 RAR-----LLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILM 167

Query: 162 TEGAYDVIQKLKV-------KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           +   + +I ++K           S +I+ +N  ++   K+  +        ++V  G   
Sbjct: 168 SLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHP 227

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +  T+  +I   C+   ++ A  ++  M + G   N V +  +I+  C+ G +  ALKLF
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
                M+ D+  P   T+  +I      GR   A  +   M + G + NV TY  LIDG 
Sbjct: 288 AD---MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PD 393
            +    +EA ++  EM ++GL+P+ V YN+ I     EG ++ A  +L D+++ + C P+
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-DLMESNSCGPN 403

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+ L  GLC+   V +A  L N++LE  +     +YN LI+  CK N+L +A +LLS
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M   GL+PD  TY   ID  CK G +E A  +++++K    K N VIY ++I+G CK  
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A SLL+       L ++ TYN LI G     K+ EA ++ ++M  +G+    V Y 
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           ILI  + K G +  A ++   M+  G  PD  TYT  +  +      EEV ++   M   
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643

Query: 633 GVSPDNQTYNAII 645
           G+ PD  TY  +I
Sbjct: 644 GILPDLVTYTVLI 656



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 247/486 (50%), Gaps = 24/486 (4%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFNLVIYALCKECKLEE 234
           G   ++H++++ L+ L++   +G   K+   M+ SC  +E+V    L +           
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDV----LFV----------- 140

Query: 235 ALSLYYRMLKSGIW---PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
            L ++ +M   G +   P + C+N I+    +   ++    ++ ++     + + PN  T
Sbjct: 141 -LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL---LNNQISPNIYT 196

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N ++NG+CK+G V  AE     +++AG+  +  TY +LI G+ R    + A  +   M 
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++G   N V Y + IH L   G +  AL + +DM + + CP   TY++L   L  +G   
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L N++ E+    + ++Y +LI+ LCK N +  A+++LS M  +GLIP ++TY  LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGL 530
           DGYCK G I+ A ++ + M+     PN   YN +I GLCK   +  A +LL +  +R   
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
              ITYN+LI+G      +  A+ + S M   G+  ++  Y++ I+ LCK G  ++A  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              +   G+  + V YT L+  + K    +    L + M+     P++ TYN +I  L  
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 651 EKSAED 656
           EK  ++
Sbjct: 557 EKKMKE 562



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 244/512 (47%), Gaps = 31/512 (6%)

Query: 133 EGLLD-SYEI--------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           EG++D ++EI        C      ++ L+    +      A  ++ K+  +  S S+  
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N+ +    K+N++   ++L   M   G V +  T+++ I  LCKE ++EEA +L+  + 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+  N V +  +I+  C+VG ++ A  L  +M     D+ LPNS T+N +I G CK  
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM---LNDACLPNSYTYNVLIEGLCKEK 558

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +++ A  +   M+  G+   V TY  LI    + G+ + AL++ + MV  G  P+   Y 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + +H  F++G +E    V++ M ++ I PD  TY++L  G  R G   +AF     +++ 
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAK------------------QLLSSMIVRGLIPDII 465
                 Y  +ILI  L   N +   +                  +L   M+  G   D+ 
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVS 738

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            YG LI G+C+   +E A  +  +MK+    P+  IYNS+++  CK      A  L+ A 
Sbjct: 739 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 798

Query: 526 QRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              GLL  + +Y  L+ G +I G   +A A+F  + + G   ++V + +LI+ L K    
Sbjct: 799 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 858

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            +  EL+ +M   G  P+ +TY+ L+    + 
Sbjct: 859 DECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/604 (23%), Positives = 264/604 (43%), Gaps = 74/604 (12%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H L    R ++AL L  ++   N                 C  T   +  L+ A +  
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDN-----------------CCPTVRTYTVLIYALSGS 312

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE----- 214
           G    A ++  ++K KG   ++H +   +  L K N++    K+  EM   G +      
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 215 ------------------------------NVNTFNLVIYALCKECKLEEALSLYYRMLK 244
                                         N  T+N +I  LCK+ K+ +A++L  +ML+
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
             + P+++ +N +I+  C+V DLE A   +R + +M+ + ++P+  T++  I+  CK GR
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESA---YRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           VE A  +  ++   G+  N   Y  LIDGY + G  + A  L + M+    +PN+  YN 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I  L  E  ++ A  +++ M+   + P   TY+IL   + ++G    A K+ N ++   
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              D  +Y   ++       L     +++ M   G++PD++TY  LIDGY + G    A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLC---------KDASLDAAKSLLQASQRIGL----- 530
              + M     KP+L I + +I  L           +  +D+  + L+    + L     
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV 729

Query: 531 -----LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
                +D   Y  LI G+    ++ EA  +   M+  G++ ++  YN L++  CK G Y 
Sbjct: 730 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYA 789

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L+  M+ +G++P   +Y  LV       S E+   +   ++  G + D   +  +I
Sbjct: 790 EAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 849

Query: 646 SPLL 649
             LL
Sbjct: 850 DGLL 853



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 163/359 (45%), Gaps = 19/359 (5%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            LE +L+  + C      ++ L+    +    + A  ++ K+   G   ++  +   +  
Sbjct: 531 LLERMLN--DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           ++K        K++  MVS GY  +V T+   ++A   +  LEE   +  +M + GI P+
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSG-------DSVLPNSVTH-NCIINGFCKL 302
           +V + ++I+   ++G    A    + M V +G        S+L  +++H N +     ++
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCM-VDTGCKPSLYIVSILIKNLSHENRMKETRSEI 707

Query: 303 G--------RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           G          E A ++   M++ G   +V  Y  LI G+ +    EEA  L   M +RG
Sbjct: 708 GIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG 767

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P+  +YNS +      G    A+ ++  M++  + P   +Y +L  GL   G  ++A 
Sbjct: 768 MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAK 827

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            + + +L      D  ++ +LI+ L K + +    +L+  M  +G  P+ +TY  LI+G
Sbjct: 828 AVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 277/566 (48%), Gaps = 23/566 (4%)

Query: 92  HSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA 151
           H L  +  ++  L     FD    L+  L S+ S+                      F  
Sbjct: 53  HPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSI-----------------PNATTFAT 95

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+++ T     E    +++     G     + +N  L+ LV+ N++     L+ +MV+ G
Sbjct: 96  LIQSFTNFHEIENLLKILEN--ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEG 153

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            V +V+TFN++I ALCK  +L  A+ +   M   G+ P+ + F  ++    + GDL  AL
Sbjct: 154 IVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGAL 213

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           K+ ++M    G   L  +V+   ++NGFCK GRVE A      + + G   +  T+ +L+
Sbjct: 214 KMKKQM---LGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLV 270

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           +G+ R G+  +AL + D M+++G  P+   YNS I  +   G+ E A+ +L  MI +   
Sbjct: 271 NGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS 330

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ L   LC+   ++ A  L   ++ + ++ D  ++N LI  LC S N   A ++
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEM 390

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M  +G  PD  TY  LID  C    ++ A+ + + M+      N V+YN++I+GLCK
Sbjct: 391 FEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              ++ A+ +    + +G+   ++TYNTLI+G   N ++ EA  +  +M   G+  +K  
Sbjct: 451 SRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN L+ + C+ G  ++A ++++ M  +G  PD  TY TL+    +    +   +L   + 
Sbjct: 511 YNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQ 570

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
           + G+      YN +I  L   K  ++
Sbjct: 571 MKGIVLTPHAYNPVIQALFMRKRTKE 596



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 197/447 (44%), Gaps = 48/447 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++LV    +IG    A D++  +  KG    ++ +N+ +S + KL E  +  ++ ++M
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +      N  T+N +I ALCKE ++E A  L   ++  G+ P+V  FN +I   C   + 
Sbjct: 325 ILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ 384

Query: 268 EFALKLFRKMG--------------------------------VMSGDSVLPNSVTHNCI 295
           + A+++F +M                                  M       N+V +N +
Sbjct: 385 DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK  R+E AEEI   M   G+  +  TY TLIDG  +    EEA +L D+M+  GL
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+   YNS + +    GD+E A  ++  M      PD FTY  L  GLCR G V  A K
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L   V  + +V   ++YN +I  L          +L   M+ +   PD +T+  +  G C
Sbjct: 565 LLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLC 624

Query: 476 KGGN-IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-------QASQR 527
            GG  I+ A+     M +    P    +  +  GLC  +  D    L+       Q S+R
Sbjct: 625 NGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSER 684

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFA 554
                     ++I G+    K  +A A
Sbjct: 685 --------ETSMIRGFLKIRKFNDALA 703



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 158/342 (46%), Gaps = 10/342 (2%)

Query: 92  HSLESSCAIVHLLVNWRRFDDA----LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA 147
           + +E++  +  +LV+     D      L+ G  +S N    +E  E + +    CK    
Sbjct: 347 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG--CKPDEF 404

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+ +       + A  ++++++  G + +   +N  +  L K   I    +++ +M
Sbjct: 405 TYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  T+N +I  LCK  ++EEA  L  +M+  G+ P+   +N ++   C+VGD+
Sbjct: 465 ELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDI 524

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A  + +    M+ +   P+  T+  +I G C+ GRV+ A ++  ++   GI      Y
Sbjct: 525 EKAGDIVQ---TMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAY 581

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF-AEGDVEGALFVLSDMI 386
             +I        ++E +RL  EM+++   P+ + +      L    G ++ A+    +M+
Sbjct: 582 NPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEML 641

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           +K I P+  ++  L +GLC         +L N V+E+  + +
Sbjct: 642 EKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE 683


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 244/482 (50%), Gaps = 40/482 (8%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EM+      +V TFN V++ALC++  + E+ +L  ++LK G+  N    N+ I   C
Sbjct: 102 LFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC 161

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G LE A+ L   M       + P+ VT+N ++ G CK  +V+ A +    M+  G   
Sbjct: 162 EGGRLEEAVALVESMDAY----IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP 217

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY T+IDGY +    +EA  L  + + +G +P+ V Y S I+ L AEGDVE AL + 
Sbjct: 218 DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELF 277

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++   K + PD   Y+ L KGLCR G +  A ++ N+++E+    D ++YNI+IN LCK 
Sbjct: 278 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKM 337

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N++ A  +++  IV+G +PD+ T+ T+IDGYCK   ++ A+Q+ E M      P+ + Y
Sbjct: 338 GNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITY 397

Query: 503 NSIINGLCKDASL------------------------------------DAAKSLLQASQ 526
           NS++NGLCK                                        +A+  +++ SQ
Sbjct: 398 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQ 457

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
              + D I++NTLI+G+  NG +  A+ +F ++   G +     +NILI         Q 
Sbjct: 458 DGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 517

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++   MI  G  PD  TY  LV    K  + +       +MV  G  P   T+  +++
Sbjct: 518 AEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLN 577

Query: 647 PL 648
            L
Sbjct: 578 SL 579



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 214/412 (51%), Gaps = 5/412 (1%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P    +N I++        + A K++ +M + +G  V P++ TH   I  FC  GR 
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRM-LSAG--VAPDARTHTVRIKSFCITGRP 61

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +  ++ + G D     Y T++ G    G   +A  L DEM++R + P+   +N+ 
Sbjct: 62  HVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNV 121

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           +H L  +GD+  +  +L+ ++ + +  + FT +I  +GLC  G +++A  L  + ++ ++
Sbjct: 122 LHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL-VESMDAYI 180

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +YN L+  LCK + +  A Q L  M+ +G IPD  TY T+IDGYCK   ++ A +
Sbjct: 181 APDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATE 240

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           + ++       P+ V Y S+INGLC +  ++ A  L   +Q   L  D + YN+L+ G  
Sbjct: 241 LLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLC 300

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G I  A  + +EM   G   +   YNI+IN LCK G    A  +M   I+ G +PD  
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           T+ T++  + K    +  ++L + M + G++PD  TYN++++ L     A++
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 242/554 (43%), Gaps = 76/554 (13%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C   P  +  +VR     G    A  +  ++  +     +  +NN L  L +  +I    
Sbjct: 76  CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESG 135

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  +++  G   N  T N+ I  LC+  +LEEA++L   M  + I P+VV +N ++   
Sbjct: 136 ALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGL 194

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   ++ A +  R+M        +P+  T+N II+G+CK   ++ A E+    I  G  
Sbjct: 195 CKDSKVQEAAQYLRRM---MNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFV 251

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY +LI+G    G  E AL L +E   + L P+ VVYNS +  L  +G +  AL V
Sbjct: 252 PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQV 311

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +++M++    PD +TY+I+  GLC+ G +  A  + N  + +  + D +++N +I+  CK
Sbjct: 312 MNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCK 371

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L +A QL+  M + G+ PD ITY ++++G CK G  +   + +E M     +PN + 
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 431

Query: 502 YN-----------------------------------SIINGLCKDASLDAAKSLLQASQ 526
           YN                                   ++I+G C++  LD A  L Q   
Sbjct: 432 YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLD 491

Query: 527 RIGL------------------------------------LDAITYNTLINGYFINGKIA 550
             G                                      D  TY  L++G      + 
Sbjct: 492 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVD 551

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A+   +EM + G   +   +  ++N L       +A  ++ +M+  G++P+ V  T L 
Sbjct: 552 RAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVD-TILS 610

Query: 611 TRFSKNCSPEEVIE 624
           T   +  +P+ ++E
Sbjct: 611 TDKKEIAAPKILVE 624



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 190/392 (48%), Gaps = 7/392 (1%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           +L+      G  E A ++  + + K     +  +N+ +  L +   I    ++  EMV  
Sbjct: 259 SLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED 318

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   ++ T+N+VI  LCK   + +A  +    +  G  P+V  FN +I+  C+   L+ A
Sbjct: 319 GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSA 378

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+L  +M +     + P+++T+N ++NG CK G+ +   E    MI  G   N  TY  L
Sbjct: 379 LQLVERMWMYG---IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 435

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I+ + +    EEA  +   M + GL+P+ + +N+ IH     GD++GA  +   + +K  
Sbjct: 436 IENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 495

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
                T++IL         ++ A K+  +++ +    D Y+Y +L++  CK+ N+  A  
Sbjct: 496 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYV 555

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
            L+ M+ +G +P + T+G +++       +  AV +   M ++   P +V  ++I++   
Sbjct: 556 HLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTDK 613

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           K+ +  A K L++   + G +   TY  L  G
Sbjct: 614 KEIA--APKILVEELMKKGHISYPTYEVLHEG 643


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 262/523 (50%), Gaps = 16/523 (3%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A   ++ AL+    +    + A  ++ +++  G   ++  +N+ +  L K NE  R  +L
Sbjct: 77  ADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQEL 136

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-------SGIWPNVVCFNM 256
           ++ M S     ++ T+N ++  L +  KLE A++L+  ML            PNV+ +++
Sbjct: 137 FEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSV 196

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I+  C+   +  A++L   M         P+ +T+  +++G CK  +V  A E+   M+
Sbjct: 197 LIDGLCKANRVSQAVELLESM---KARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
            AG   N+ TY +L+ G  R     +AL L  +M  RG  PN V Y + I  L   G V+
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 313

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +L+DMIDK   PD   Y++L  GLC+   V ++  L  + +   +  D  +Y+ +I
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 373

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LC+SN L  A +LL  +  RG  PD+I Y TLIDG CK G ++ A  +YE M      
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD 433

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
            ++V Y+++I+GLCK   +D A  LL    R+G   + +TYN+LI G      + EA  +
Sbjct: 434 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 493

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM-----KVMILHGIIPDYVTYTTLV 610
             EM     A + V YNILI+ +C+      A  L+     + +   G   D + Y++L+
Sbjct: 494 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLI 553

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
               K     E ++   +M+ +GV PD+ TY+ ++  L   K 
Sbjct: 554 DGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 596



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 249/513 (48%), Gaps = 11/513 (2%)

Query: 141 ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           IC+     + AL+R   + G  + A     +++ K    ++   +  +  L K       
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            + ++ M   G V +   +  ++  L KE +L++AL++ + M   G  PNVV +N +I+ 
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-- 318
            C+  + + A +LF  M  +      P+ VT+N +++G  + G++E A  +   M+    
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECS---PSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS 180

Query: 319 -GID--C--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
             +D  C  NV TY+ LIDG  +     +A+ L + M  RG  P+ + Y   +  L  E 
Sbjct: 181 HDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKES 240

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            V  A  VL +M+D    P+  TY+ L  GLCR   V  A  L   +       +  +Y 
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+ LCK   +  A  +L+ MI +G  PD++ Y  LI+G CK   ++ ++ +       
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360

Query: 494 EKKPNLVIYNSIINGLCKDASLD-AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEA 552
             KP++V Y+S+I GLC+   LD A + LL    R    D I Y+TLI+G    GK+ EA
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           F ++  M   G   + V Y+ LI+ LCK G   +A  L+  M+  G  P  +TY +L+  
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                  +E IEL ++M  S  +P   TYN +I
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 208/408 (50%), Gaps = 11/408 (2%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V  +  ++   C+ G+++ A + F +M      +++PN    + +I+G CK  R   A
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEM---RSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
                AM  +GI  +   Y  L+ G  +    ++AL +  EM   G  PN V YNS I  
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE--HMV 426
           L    + + A  +   M      P   TY+ L  GL R G +++A  L  ++L+   H +
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 427 GDAYS-----YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
            D  S     Y++LI+ LCK+N ++ A +LL SM  RG  PD+ITY  L+DG CK   + 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLI 540
            A +V   M      PNLV YNS+++GLC+   +  A +L++  + R    + +TY TLI
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G++ +A AM ++M + G   + + YN+LIN LCK     ++  L++  +  GI 
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           PD VTY++++    ++   +E   L   +   G  PD   Y+ +I  L
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 411



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 167/344 (48%), Gaps = 8/344 (2%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TYA L+ G+ RGG  ++A R  DEM  + L+PN  + +  I  L        AL   
Sbjct: 8   DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCF 67

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M    I  D   Y+ L  GL +   + QA  + +++ +     +  +YN LI+ LCK+
Sbjct: 68  RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKN 127

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK------- 495
           N    A++L   M      P ++TY TL+DG  + G +E A+ +++ M            
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN++ Y+ +I+GLCK   +  A  LL++ +  G   D ITY  L++G     K+A A+ 
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  EM + G   N V YN L++ LC+      A  LM+ M   G  P+ VTY TL+    
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           K    ++   +  DM+  G +PD   YN +I+ L      ++ +
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 351


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 278/555 (50%), Gaps = 38/555 (6%)

Query: 70  FRKS--PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS 127
            R+S  P LA++F+ W GE + + H + S   ++ +LV                S +   
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVK---------------SGHQFR 45

Query: 128 PLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
             +  + LL S   C      F  L+R   + G    A + ++ L     +  ++ +N  
Sbjct: 46  TGKVYKDLLHSG--CSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFL 103

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG- 246
           +  L K     +  KL++ M S     ++ T+N VI  LCK   LE+A  L   M++ G 
Sbjct: 104 IHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGG 163

Query: 247 -IWPNVVCFNMIINEA-CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
              P++V +N +IN   C+ GD+E AL++   M  ++G +  P+ +T+N II+  C  GR
Sbjct: 164 KSAPDIVTYNTLINAGICKDGDVEEALEILDGMK-LAGPA--PDVITYNSIIHALCVAGR 220

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           V  A EI   M       ++ T+ TL+DG+ + G    AL + +EM +  ++P+ + Y  
Sbjct: 221 VVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 277

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL-----HNQ 419
            ++ L   G V+ A ++L +++ +   PD   Y+ L  GLC++G +++A KL       +
Sbjct: 278 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSARE 337

Query: 420 VLEE----HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +L E    +MV   ++YNI++  L K  +++ A  L+S ++ RG +PD++TY TLIDG C
Sbjct: 338 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 397

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAI 534
           K   +  A  + + M  +   PN V   S++ GLC+   +D A SL+ + S++    + +
Sbjct: 398 KANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 457

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y +LI+G   + ++ +A  +   MR  G+A++   Y  LI  +   G   +A  +   M
Sbjct: 458 VYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517

Query: 595 ILHGIIPDYVTYTTL 609
           +  G +PD  T  TL
Sbjct: 518 VARGFLPDGSTSKTL 532



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/494 (31%), Positives = 249/494 (50%), Gaps = 20/494 (4%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G+   +H++N+ L  LVK     R  K+YK+++  G   N+ TF ++I   CK  +   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L     + +  + P+V  FN +I+   + G+ + A+KLF  M       V P+  T+N +
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM---ESSRVNPDIFTYNTV 138

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLID-GYARGGSSEEALRLCDEMVK 352
           I+G CK G +E A E+   MI+ G     ++ TY TLI+ G  + G  EEAL + D M  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+ + YNS IH L   G V  A  +L  M      PD  T++ L  G C+ G + +
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPR 255

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A ++  ++  E+++ D  +Y IL+N LC+   +  A  LL  ++ +G IPD+I Y +L+D
Sbjct: 256 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 315

Query: 473 GYCKGGNIE---------GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           G CK G IE          A ++   M  +   P L  YN ++ GL KD S+  A SL+ 
Sbjct: 316 GLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 375

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G + D +TYNTLI+G     ++ EA  +  EM ++G   N V    ++  LC+ G
Sbjct: 376 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVG 435

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
               A  L+  M      P+ V YT+L+    K+   ++   + D M   GV+ D+  Y 
Sbjct: 436 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYR 495

Query: 643 A-IISPLLGEKSAE 655
             I+S + G + AE
Sbjct: 496 KLIVSMIHGGRVAE 509



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 229/459 (49%), Gaps = 19/459 (4%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  +V+++N ++  L K         +Y  +L SG  PN+V F ++I   C+ G    A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+  R +   S   V P+    N +I+G  K G  + A ++   M  + ++ ++ TY T+
Sbjct: 82  LEFLRALDEFS---VAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138

Query: 331 IDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIH-WLFAEGDVEGALFVLSDMID 387
           I G  + G+ E+A  L +EM++RG    P+ V YN+ I+  +  +GDVE AL +L  M  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  TY+ +   LC  G V +A ++   +       D  ++N L++  CK+  L  
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPR 255

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A ++L  M    ++PD+ITY  L++G C+ G ++ A  + E + +    P+++ Y S+++
Sbjct: 256 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 315

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAI---------TYNTLINGYFINGKIAEAFAMFS 557
           GLCK   ++ A  L+ + S R  L + +         TYN ++ G   +G I++A ++ S
Sbjct: 316 GLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 375

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           ++   G   + V YN LI+ LCK    ++A +L   M   G  P+ VT  ++V    +  
Sbjct: 376 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVG 435

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             ++   L  +M     +P+   Y ++I  L      +D
Sbjct: 436 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDD 474



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 183/362 (50%), Gaps = 22/362 (6%)

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
           +A  + G   +V +Y  L+D   + G      ++  +++  G  PN V +   I      
Sbjct: 16  WAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKA 75

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G    AL  L  + +  + PD + ++ L  GL ++G   QA KL   +    +  D ++Y
Sbjct: 76  GQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTY 135

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRG--LIPDIITYGTLID-GYCKGGNIEGAVQVYEN 489
           N +I+ LCKS NL  A++LL  MI RG    PDI+TY TLI+ G CK G++E A+++ + 
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDG 195

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL----DAITYNTLINGYFI 545
           MK     P+++ YNSII+ LC       A  +++A++ +  +    D +T+NTL++G+  
Sbjct: 196 MKLAGPAPDVITYNSIIHALC------VAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCK 249

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G +  A  +  EM    I  + + Y IL+N LC+ G  Q A  L++ ++  G IPD + 
Sbjct: 250 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 309

Query: 606 YTTLVTRFSKNCSPEE---------VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           YT+LV    K+   EE           E+  +MV   + P   TYN ++  L+ + S   
Sbjct: 310 YTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 369

Query: 657 QV 658
            V
Sbjct: 370 AV 371



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 22/292 (7%)

Query: 129 LEFLEGLLDSYEICKAT--PAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           LE LE      E+C+    P V  +  LV    ++G  + A+ +++++  +G+   + A+
Sbjct: 257 LEVLE------EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 310

Query: 185 NNFLSHLVKLNEIGRFWKLYKEM---------VSCGYVENVNTFNLVIYALCKECKLEEA 235
            + +  L K  EI    KL KEM         VS   V  + T+N+V+  L K+  + +A
Sbjct: 311 TSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 370

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           +SL   ++  G  P+VV +N +I+  C+   +  A  L  +M  +      PN VT   +
Sbjct: 371 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLG---CFPNDVTLGSV 427

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           + G C++GRV+ A  +   M +     NV  Y +LIDG  +    ++A  + D M  +G+
Sbjct: 428 VFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGV 487

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             ++  Y   I  +   G V  A+ +  +M+ +   PD  T   L +    N
Sbjct: 488 ALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 539


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 169/593 (28%), Positives = 284/593 (47%), Gaps = 56/593 (9%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD 150
           S S+++   +V  L    + D A  + G +   N+V+P        D Y         + 
Sbjct: 177 SPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAP--------DVY--------TYT 220

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
            +++A  + G  + A+ ++ +L+  G   ++  +N  +  L +   +   ++L   MV  
Sbjct: 221 VMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEG 280

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
               ++ TF ++I  L +  +  E  ++   M   GI PN V +N +I   C+ G    A
Sbjct: 281 RLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEA 340

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+LF +M V  G  +    VT+N I    CK G +E AE+I   M+ AG+  +   + ++
Sbjct: 341 LRLFDEM-VSKG--IKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSV 397

Query: 331 IDGYARG-GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +  + RG G  +  LRL  EMV R L PN+ V  + I  L   G  E A  +   ++ K 
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  +  T + L  GLC+   +K+A K+   +++  +  D  +YNI+I + CK++ +  A 
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAI 517

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           QL   MI RG  PD+ T+ T +  YC  G +E  + + + MK    KP++V Y +II+G 
Sbjct: 518 QLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGY 577

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   +  A   L    + GL  +A+ YN LI GY  NG I++A  +   M++ GI    
Sbjct: 578 CKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTP 637

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILH----GII------------------------ 600
           + YN L+ ++C  G  ++A+E+    IL     G+I                        
Sbjct: 638 ITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKE 697

Query: 601 -------PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
                  P+ +TYTTL+  + K  + EE  +L D+MV SG+ PD  +YN +IS
Sbjct: 698 MHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLIS 750



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 270/582 (46%), Gaps = 25/582 (4%)

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHL-----------LVNWRRF 110
           L  +V  E R    +A + YT+         + E   A V L           +V +   
Sbjct: 198 LARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVL 257

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYD-VI 169
            DAL   G +  A  +     +EG L      + +   F  L+    + G   G  D V+
Sbjct: 258 MDALCRSGRVEEAFQLKG-RMVEGRL------RPSIVTFGILINGLAR-GQRFGEVDAVL 309

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           Q+++  G + +   +N  +    +        +L+ EMVS G  + V T+NL+  ALCKE
Sbjct: 310 QEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKE 369

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ-VGDLEFALKLFRKMGVMSGDSVLPN 288
            ++E A  +   ML +G+  +   FN ++    +  G L+  L+L R+M       + PN
Sbjct: 370 GEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREM---VARFLKPN 426

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
                  I   CK G+ E A EI + ++  G+  N+ T   LI G  +G + +EA ++  
Sbjct: 427 DAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLK 486

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            MV  G+  + + YN  I +      +E A+ +  DMI +   PD FT++   +  C  G
Sbjct: 487 AMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLG 546

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V+    L +Q+  E +  D  +Y  +I+  CK+ ++  A + L  +I  GL P+ + Y 
Sbjct: 547 KVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYN 606

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQR 527
            LI GY + G+I  A+ V + MK    +P  + YNS++  +C    ++ AK +  Q   +
Sbjct: 607 ALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILK 666

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
              L  I Y  +I G+   GKI EA   F EM    I  NK+ Y  L+   CK G  ++A
Sbjct: 667 NIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEA 726

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            +L   M+  GI+PD V+Y TL++   +  S ++++E   +M
Sbjct: 727 FKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 199/415 (47%), Gaps = 8/415 (1%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A   +  +   G  P++   N+++      G L+ A K+F +M    G++V P+  T+  
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM--RDGNAVAPDVYTYTV 221

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I   C+ G ++ A  +   + ++GI   V TY  L+D   R G  EEA +L   MV+  
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           L P+ V +   I+ L A G   G +  VL +M    I P+   Y+ L    CR G   +A
Sbjct: 282 LRPSIVTFGILINGL-ARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEA 340

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L ++++ + +     +YN++   LCK   +  A+Q+L  M++ G+      + +++  
Sbjct: 341 LRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAW 400

Query: 474 YCKG-GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL--LQASQRIGL 530
           + +G G ++  +++   M     KPN  +  + I  LCK    + A  +  L   + +G 
Sbjct: 401 HLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLG- 459

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           ++  T N LI+G      + EA  +   M + G+  +++ YNI+I F CK    ++A +L
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              MI  G  PD  T+ T +  +      E+++ L D M   G+ PD  TY  II
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTII 574


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 299/613 (48%), Gaps = 23/613 (3%)

Query: 46  RKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
           +K   L ++ PSLT S V+ + + F   P+ AL F+ W+     F H++ S  +++++L+
Sbjct: 54  QKHPSLRKLLPSLTPSHVSSLFA-FNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILI 112

Query: 106 NWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA----VFDALVRACTQIGA 161
             R     LL +   +  + +     +E +L   E+ +   A     F   +R    I  
Sbjct: 113 RAR-----LLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILM 167

Query: 162 TEGAYDVIQKLKV-------KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           +   + +I ++K           S +I+ +N  ++   K+  +        ++V  G   
Sbjct: 168 SLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHP 227

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +  T+  +I   C+   ++ A  ++  M + G   N V +  +I+  C+ G +  ALKLF
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
                M+ D+  P   T+  +I      GR   A  +   M + G + NV TY  LIDG 
Sbjct: 288 AD---MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PD 393
            +    +EA ++  EM ++GL+P+ V YN+ I     EG ++ A  +L D+++ + C P+
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-DLMESNSCGPN 403

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+ L  GLC+   V +A  L N++LE  +     +YN LI+  CK N+L +A +LLS
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M   GL+PD  TY   ID  CK G +E A  +++++K    K N VIY ++I+G CK  
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A SLL+       L ++ TYN LI G     K+ EA ++ ++M  +G+    V Y 
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           ILI  + K G +  A ++   M+  G  PD  TYT  +  +      EEV ++   M   
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643

Query: 633 GVSPDNQTYNAII 645
           G+ PD  TY  +I
Sbjct: 644 GILPDLVTYTVLI 656



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 247/486 (50%), Gaps = 24/486 (4%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFNLVIYALCKECKLEE 234
           G   ++H++++ L+ L++   +G   K+   M+ SC  +E+V    L +           
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDV----LFV----------- 140

Query: 235 ALSLYYRMLKSGIW---PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
            L ++ +M   G +   P + C+N I+    +   ++    ++ ++     + + PN  T
Sbjct: 141 -LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL---LNNQISPNIYT 196

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N ++NG+CK+G V  AE     +++AG+  +  TY +LI G+ R    + A  +   M 
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++G   N V Y + IH L   G +  AL + +DM + + CP   TY++L   L  +G   
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L N++ E+    + ++Y +LI+ LCK N +  A+++LS M  +GLIP ++TY  LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGL 530
           DGYCK G I+ A ++ + M+     PN   YN +I GLCK   +  A +LL +  +R   
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
              ITYN+LI+G      +  A+ + S M   G+  ++  Y++ I+ LCK G  ++A  L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              +   G+  + V YT L+  + K    +    L + M+     P++ TYN +I  L  
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556

Query: 651 EKSAED 656
           EK  ++
Sbjct: 557 EKKMKE 562



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 146/615 (23%), Positives = 262/615 (42%), Gaps = 85/615 (13%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H L    R ++AL L  ++   N                 C  T   +  L+ A +  
Sbjct: 270 LIHGLCEAGRINEALKLFADMTEDN-----------------CCPTVRTYTVLIYALSGS 312

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE----- 214
           G    A ++  ++K KG   ++H +   +  L K N++    K+  EM   G +      
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 215 ------------------------------NVNTFNLVIYALCKECKLEEALSLYYRMLK 244
                                         N  T+N +I  LCK+ K+ +A++L  +ML+
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
             + P+++ +N +I+  C+V DLE A   +R + +M+ + ++P+  T++  I+  CK GR
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESA---YRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           VE A  +  ++   G+  N   Y  LIDGY + G  + A  L + M+    +PN+  YN 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I  L  E  ++ A  +++ M+   + P   TY+IL   + ++G    A K+ N ++   
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              D  +Y   ++       L     +++ M   G++PD++TY  LIDGY + G    A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKD------------------ASLDAAKSLLQASQ 526
              + M     KP+L I + +I  L  +                   S+D A        
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY 729

Query: 527 RIGL------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
            I L            +D   Y  LI G+    ++ EA  +   M+  G++ ++  YN L
Sbjct: 730 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 789

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           ++  CK G Y +A  L+  M+ +G++P   +Y  LV       S E+   +   ++  G 
Sbjct: 790 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 849

Query: 635 SPDNQTYNAIISPLL 649
           + D   +  +I  LL
Sbjct: 850 NYDEVAWKVLIDGLL 864



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 234/501 (46%), Gaps = 42/501 (8%)

Query: 133 EGLLD-SYEI--------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           EG++D ++EI        C      ++ L+    +      A  ++ K+  +  S S+  
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N+ +    K+N++   ++L   M   G V +  T+++ I  LCKE ++EEA +L+  + 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+  N V +  +I+  C+VG ++ A  L  +M     D+ LPNS T+N +I G CK  
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM---LNDACLPNSYTYNVLIEGLCKEK 558

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +++ A  +   M+  G+   V TY  LI    + G+ + AL++ + MV  G  P+   Y 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + +H  F++G +E    V++ M ++ I PD  TY++L  G  R G   +AF     +++ 
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAK-----------------------------QLLSS 454
                 Y  +ILI  L   N +   +                             +L   
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEK 738

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G   D+  YG LI G+C+   +E A  +  +MK+    P+  IYNS+++  CK   
Sbjct: 739 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 798

Query: 515 LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
              A  L+ A    GLL  + +Y  L+ G +I G   +A A+F  + + G   ++V + +
Sbjct: 799 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 858

Query: 574 LINFLCKFGCYQQARELMKVM 594
           LI+ L K     +  EL+ +M
Sbjct: 859 LIDGLLKRDLVDECSELIDIM 879



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 9/282 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + A + A    G  E   DVI K+  +G    +  +   +    +L    R +   K M
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   ++   +++I  L  E +++E  S      + GI       ++ I +  +  + 
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRS------EIGIDSVSNVNSVDIADVWKTLEY 729

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E ALKLF KM V  G ++  +   +  +I GFC+  R+E A+ + + M + G+  +   Y
Sbjct: 730 EIALKLFEKM-VEHGCTI--DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 786

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L+D   + G   EA+RL D MV+ GL+P    Y   +  L+ EG  E A  V   ++ 
Sbjct: 787 NSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLS 846

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
                D   + +L  GL +   V +  +L + + E+     A
Sbjct: 847 CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQA 888


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 266/513 (51%), Gaps = 19/513 (3%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           + +V++ ++R   + G+ E    V++++K+ G       +      L+ +   G+F +LY
Sbjct: 96  SSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIF------LIFVESYGKF-ELY 148

Query: 205 KEMVSCGYV--------ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
            E+V    V         +   +N+++  L    KL+   S +  M++  I  +V  FN+
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I   C+   +  A+ +   M  M    + P+  T   I+ G+ + G ++ A  I+  M+
Sbjct: 209 LIKALCKAHQVRPAILM---MEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMV 265

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           + G  C   T   LI+G+ + G  ++AL    E V  G  P+   YN+ ++ L   G  +
Sbjct: 266 EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAK 325

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A+ V+  M+   + PD +TY+ L  GLC+ G +++A K+ +Q++      +A +YN +I
Sbjct: 326 HAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAII 385

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + LCK N +  A ++   +  +G++PD+ T+ +LI G C   N + A+ ++E MK    +
Sbjct: 386 SSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCR 445

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAM 555
           P+   YN +I+ LC    L+ A +LL+  +  G   + + YNTLI+G+  N +I EA  +
Sbjct: 446 PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEI 505

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F EM   G++ + V YN LI+ LCK    + A +LM  MI+ G+ PD  TY +L+T F K
Sbjct: 506 FDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCK 565

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               ++  ++   M  SG +PD  TY  +IS L
Sbjct: 566 TGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 256/512 (50%), Gaps = 11/512 (2%)

Query: 137 DSYEICKATP---AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
           D Y I   T     + + LV A  ++   E A+  + + +++ H VS   +N  +  L K
Sbjct: 160 DEYRIKPDTRFYNVLLNVLVDA-NKLKLVESAHSSMVRRRIR-HDVS--TFNILIKALCK 215

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
            +++     + +EM S G   +  TF  ++    +   L+ AL +  +M++ G     V 
Sbjct: 216 AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVT 275

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N++IN  C+ G ++ AL  F +  V  G    P+  T+N ++NG CK+G  + A E+  
Sbjct: 276 VNVLINGFCKQGRIDQALS-FIQEAVSEG--FRPDQFTYNTLVNGLCKIGHAKHAMEVVD 332

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
           AM+  G+D ++ TY +LI G  + G  EEA+++ D+MV R   PN V YN+ I  L  E 
Sbjct: 333 AMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKEN 392

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            V+ A  +   +  K I PD  T++ L +GLC +   K A  L  ++  +    D ++YN
Sbjct: 393 RVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYN 452

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           +LI+ LC S  L  A  LL  M + G   +++ Y TLIDG+CK   IE A ++++ M+  
Sbjct: 453 MLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQ 512

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
               + V YN++I+GLCK   ++ A  L+      GL  D  TYN+L+  +   G I +A
Sbjct: 513 GVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKA 572

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +   M + G   + V Y  LI+ LCK G  Q A  L++ + + G++     Y  ++  
Sbjct: 573 ADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQA 632

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             K     E + L  +M+     PD  TY  +
Sbjct: 633 LFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 239/470 (50%), Gaps = 10/470 (2%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  L+ LV  N++      +  MV      +V+TFN++I ALCK  ++  A+ +   M 
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMP 230

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFC 300
             G+ P+   F  I+    + G+L+ AL++  +M   G    D      VT N +INGFC
Sbjct: 231 SYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTD------VTVNVLINGFC 284

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K GR++ A       +  G   +  TY TL++G  + G ++ A+ + D M+  GL P+  
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YNS I  L   G++E A+ +L  M+ +   P+  TY+ +   LC+   V +A ++   +
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
             + ++ D  ++N LI  LC S+N  +A  L   M  +G  PD  TY  LID  C    +
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
           E A+ + + M+      N+VIYN++I+G CK+  ++ A+ +    +  G+  D++TYNTL
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G   + ++ +A  +  +M   G+  +K  YN L+   CK G  ++A ++++ M   G 
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            PD VTY TL++   K    +    L   + + G+      YN +I  L 
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALF 634



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 251/497 (50%), Gaps = 6/497 (1%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           +L+  L  A+ V P   +   + SY +       F  +++   + G  +GA  + +++  
Sbjct: 208 ILIKALCKAHQVRPAILMMEEMPSYGL-SPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G   +    N  ++   K   I +     +E VS G+  +  T+N ++  LCK    + 
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKH 326

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A+ +   ML  G+ P++  +N +I+  C++G++E A+K+  +M  +S D   PN+VT+N 
Sbjct: 327 AMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM--VSRDCS-PNAVTYNA 383

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           II+  CK  RV+ A EI   +   GI  +V T+ +LI G     + + A+ L +EM  +G
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+   YN  I  L +   +E AL +L +M       +   Y+ L  G C+N  +++A 
Sbjct: 444 CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAE 503

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           ++ +++  + +  D+ +YN LI+ LCKS  +  A QL+  MI+ GL PD  TY +L+  +
Sbjct: 504 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHF 563

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           CK G+I+ A  + + M      P++V Y ++I+GLCK   +  A  LL++ Q  G+ L  
Sbjct: 564 CKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTP 623

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK-FGCYQQARELMK 592
             YN +I   F   +  EA  +F EM +     + + Y I+   LC   G   +A +   
Sbjct: 624 HAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTV 683

Query: 593 VMILHGIIPDYVTYTTL 609
            MI  G IP++ ++  L
Sbjct: 684 EMIERGNIPEFSSFVML 700



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 198/374 (52%), Gaps = 3/374 (0%)

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P++  +N ++N      +++  E    +M++  I  +V T+  LI    +      A+
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP-DHFTYSILTKG 403
            + +EM   GL P+   + + +      G+++GAL +   M++ + CP    T ++L  G
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE-YGCPCTDVTVNVLING 282

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            C+ G + QA     + + E    D ++YN L+N LCK  +   A +++ +M++ GL PD
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I TY +LI G CK G IE AV++ + M   +  PN V YN+II+ LCK+  +D A  + +
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G+L D  T+N+LI G  ++     A  +F EM+  G   ++  YN+LI+ LC   
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             ++A  L+K M L+G   + V Y TL+  F KN   EE  E+ D+M L GVS D+ TYN
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522

Query: 643 AIISPLLGEKSAED 656
            +I  L   K  ED
Sbjct: 523 TLIDGLCKSKRVED 536



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 184/399 (46%), Gaps = 39/399 (9%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ LV    +IG  + A +V+  + + G    I+ +N+ +S L KL EI    K+  +M
Sbjct: 310 TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM 369

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN------------ 255
           VS     N  T+N +I +LCKE +++EA  +   +   GI P+V  FN            
Sbjct: 370 VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH 429

Query: 256 -----------------------MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
                                  M+I+  C    LE AL L ++M +   +    N V +
Sbjct: 430 KSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL---NGCARNVVIY 486

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I+GFCK  R+E AEEI   M   G+  +  TY TLIDG  +    E+A +L D+M+ 
Sbjct: 487 NTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM 546

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            GL P+   YNS +      GD++ A  ++  M      PD  TY+ L  GLC+ G V+ 
Sbjct: 547 EGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQV 606

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   +  + MV   ++YN +I  L K N    A +L   M+ +   PD ITY  +  
Sbjct: 607 ASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYR 666

Query: 473 GYCKGGNIEG-AVQVYENMKKVEKKPNLVIYNSIINGLC 510
           G C GG   G AV     M +    P    +  +  GLC
Sbjct: 667 GLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 161/335 (48%), Gaps = 4/335 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++A++ +  +    + A ++ + L  KG    +  +N+ +  L   +      
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L++EM   G   +  T+N++I +LC   KLEEAL+L   M  +G   NVV +N +I+  
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGF 493

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   +E A ++F +M +     V  +SVT+N +I+G CK  RVE A ++   MI  G+ 
Sbjct: 494 CKNKRIEEAEEIFDEMEL---QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY +L+  + + G  ++A  +   M   G  P+ V Y + I  L   G V+ A  +
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL 610

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  +  K +      Y+ + + L +     +A +L  ++L++    DA +Y I+   LC 
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCN 670

Query: 442 SNN-LAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
               +  A      MI RG IP+  ++  L +G C
Sbjct: 671 GGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 153/361 (42%), Gaps = 56/361 (15%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           AI+  L    R D+A  +   L+++  + P           ++C      F++L++    
Sbjct: 383 AIISSLCKENRVDEATEI-ARLLTSKGILP-----------DVC-----TFNSLIQGLCL 425

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
               + A D+ +++K KG       +N  +  L    ++     L KEM   G   NV  
Sbjct: 426 SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVI 485

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I   CK  ++EEA  ++  M   G+  + V +N +I+  C+   +E A +L  +M 
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM- 544

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +M G  + P+  T+N ++  FCK G ++ A +I   M  +G + ++ TYATLI G  + G
Sbjct: 545 IMEG--LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAG 602

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             + A RL   +  +G++     YN  I  LF       A+ +  +M+DK   PD  TY 
Sbjct: 603 RVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYK 662

Query: 399 I------------------------------------LTKGLCRNGCVKQAFKLHNQVLE 422
           I                                    L +GLC         KL + ++E
Sbjct: 663 IVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIME 722

Query: 423 E 423
           +
Sbjct: 723 K 723


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/445 (32%), Positives = 235/445 (52%), Gaps = 5/445 (1%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ +M+      N+  FN V++ALCK   + EA  L  ++++ G+  N+  +N+ I   
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L  A++L   M   +    +P+ VT+N +I G CK    + A      M+  G  
Sbjct: 232 CEAGRLPEAVRLVDGMRAYA----VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 287

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY T+IDGY +    +EA  L  + V +G +P+ V Y S I+ L AEGDVE AL +
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            ++   K I PD   Y+ L KGLC  G +  A ++ N++ EE    D  +YNI+IN LCK
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             N++ A  +++  I++G +PD+ T+ TLIDGYCK   ++ A+Q+ E M +    P+ + 
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS++NGLCK   ++      Q     G   + ITYN LI  +  + K+ EA  +  +M 
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  + V +N LI   C+ G  + A  L + +   G      T+ TL+  FS   +  
Sbjct: 528 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 587

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
              ++ D+M+  G   D+ TY  +I
Sbjct: 588 MAEKIFDEMLSKGHRADSYTYRVLI 612



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 251/545 (46%), Gaps = 40/545 (7%)

Query: 143 KATPAVFDAL----VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           + +PA    L    +RA  + G    A D  +++ +     +  A+N  +  LV      
Sbjct: 43  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 102

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECK--------------------------- 231
           +  K+Y  M++ G   +++T  + + + C   +                           
Sbjct: 103 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLY 162

Query: 232 ----LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
                 +A  L+ +ML + ++PN+  FN +++  C+ GD+  A  L  K+ +  G S+  
Sbjct: 163 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV-IQRGMSI-- 219

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+N  I G C+ GR+  A  +   M +A    +V TY TLI G  +    +EA+   
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 278

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             M+ +G +P++  YN+ I        V+ A  +L D + K   PD  TY  L  GLC  
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V++A +L N+   + +  D   YN L+  LC    +  A Q+++ M   G  PDI TY
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             +I+G CK GNI  A  V  +       P++  +N++I+G CK   LD+A  L++    
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  D ITYN+++NG    GK+ E    F EM   G   N + YNILI   C+    ++
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +++  M   G+ PD V++ TL+  F +N   E    L   +   G S    T+N +I 
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 578

Query: 647 PLLGE 651
              G+
Sbjct: 579 AFSGK 583



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 241/492 (48%), Gaps = 5/492 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F+ ++ A  + G    A  ++ K+  +G S+++  +N ++  L +   +    +L   
Sbjct: 187 AAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDG 246

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M +   V +V T+N +I  LCK+   +EA+    RM+  G  P+   +N II+  C++  
Sbjct: 247 MRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 305

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A +L +   V  G   +P+ VT+  +ING C  G VE A E+       GI  ++  
Sbjct: 306 VQEATELLKD-AVFKG--FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 362

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +L+ G    G    AL++ +EM + G  P+   YN  I+ L   G++  A  V++D I
Sbjct: 363 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 422

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K   PD FT++ L  G C+   +  A +L  ++ E  +  D  +YN ++N LCK+  + 
Sbjct: 423 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 482

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              +    MI++G  P+ ITY  LI+ +C+   +E A +V   M +    P+ V +N++I
Sbjct: 483 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 542

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            G C++  L+ A  L Q  +  G    A T+NTLI  +     +  A  +F EM + G  
Sbjct: 543 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 602

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   Y +LI+  CK     +A   +  MI  G IP   T+  ++   + N    + + +
Sbjct: 603 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGI 662

Query: 626 HDDMVLSGVSPD 637
              MV  GV P+
Sbjct: 663 IHIMVKIGVVPE 674



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 6/424 (1%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           A P V  ++ L+R   +    + A   ++++  +G       +N  +    K++ +    
Sbjct: 251 AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 310

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L K+ V  G+V +  T+  +I  LC E  +E AL L+      GI P++V +N ++   
Sbjct: 311 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 370

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G +  AL++   M  M+ +   P+  T+N +ING CK+G +  A  +    I  G  
Sbjct: 371 CLQGLILHALQV---MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 427

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+ TLIDGY +    + AL+L + M + G+ P+ + YNS ++ L   G V      
Sbjct: 428 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 487

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +MI K   P+  TY+IL +  CR+  +++A K+  ++ +E +  DA S+N LI   C+
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 547

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L  A  L   +  +G      T+ TLI  +    N+  A ++++ M     + +   
Sbjct: 548 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 607

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +I+G CK A++D A   L    + G + ++ T+  +IN   +N ++ +A  +   M 
Sbjct: 608 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 667

Query: 561 NVGI 564
            +G+
Sbjct: 668 KIGV 671


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 253/474 (53%), Gaps = 11/474 (2%)

Query: 176 GHSVSIHAWNNFLSHL--VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           G++ S+ A+N  L  L    L    RF   +  M+S G   NV T+N+++ ALC     +
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSARRF---FDSMLSDGVAPNVYTYNILVRALCGRGHRK 174

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EALS+   M  +G  PN V +N ++   C+ G+++ A +L   + +M    + PN VT N
Sbjct: 175 EALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL---VDMMREGGLKPNLVTFN 231

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            ++NG CK GR+E A ++   M+K G+  +  +Y TL+ GY + G S EAL +  EM ++
Sbjct: 232 SVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK 291

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+MP+ V + S IH +   G++E A+ ++ +M ++ +  +  T++ L  G C+ G +  A
Sbjct: 292 GIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDA 351

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                ++ +  +      YN LIN  C    +  A++L+  M  +G+ PD++TY T++  
Sbjct: 352 LLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSA 411

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           YCK G+   A Q+ + M +    P+ + Y+S+I  LC++  L  A  L +    +GL  D
Sbjct: 412 YCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPD 471

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +TY +LI+G+   G +  A ++  EM   G+  + V Y++LIN L K    ++A+ L+ 
Sbjct: 472 EVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLF 531

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD-NQTYNAII 645
            +     +P  + Y  L+ R  +N   + V+ L     + G+  + ++ Y +I+
Sbjct: 532 KLYHEEPVPANIKYDALM-RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSIL 584



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 138/413 (33%), Positives = 220/413 (53%), Gaps = 7/413 (1%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+V+ +N ++  A     L  A + F  M     D V PN  T+N ++   C  G  
Sbjct: 118 GYAPSVLAYNAVL-LALSDASLPSARRFFDSM---LSDGVAPNVYTYNILVRALCGRGHR 173

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + A  +   M  AG D N  TY TL+  + R G  + A RL D M + GL PN V +NS 
Sbjct: 174 KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSV 233

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++ +   G +E A  V  +M+ + + PD  +Y+ L  G C+ GC  +A  +  ++  + +
Sbjct: 234 VNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGI 293

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
           + D  ++  LI+ +CK+ NL  A  L+  M  RGL  + IT+  LIDG+CK G ++ A+ 
Sbjct: 294 MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALL 353

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
               M++   +P++V YN++ING C    +D A+ L++  +  G+  D +TY+T+++ Y 
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            NG    AF +  +M   G+  + + Y+ LI  LC+      A  L K MI  G+ PD V
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           TYT+L+    K  + E  + LHD+MV +GV PD  TY+ +I+ L   KSA  +
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL--SKSARTK 524



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 245/479 (51%), Gaps = 19/479 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ LVRA    G  + A  V++ ++  G   +   +N  ++   +  E+ R  +L   M
Sbjct: 159 TYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM 218

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N+ TFN V+  +CK  ++E+A  ++  M+K G+ P+ V +N ++   C+VG  
Sbjct: 219 REGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCS 278

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +F +M   +   ++P+ VT   +I+  CK G +E A  +   M + G+  N  T+
Sbjct: 279 HEALSVFAEM---TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITF 335

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LIDG+ + G  ++AL    EM +  + P+ V YN+ I+     G ++ A  ++ +M  
Sbjct: 336 TALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEA 395

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + PD  TYS +    C+NG    AF+L+ Q+LE  ++ DA +Y+ LI  LC+   L  
Sbjct: 396 KGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGD 455

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  +MI  GL PD +TY +LIDG+CK GN+E A+ +++ M K    P++V Y+ +IN
Sbjct: 456 AHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLIN 515

Query: 508 GLCKDASLDAAKSLL---------QASQRIGLLDAITYN-------TLINGYFINGKIAE 551
           GL K A    A+ LL          A+ +   L     N        L+ G+ + G + E
Sbjct: 516 GLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNE 575

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           A  ++  + +    ++   Y++LI+  C+ G   +A    K M+  G  P+  +  +L+
Sbjct: 576 ADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLI 634



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 241/508 (47%), Gaps = 48/508 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ LV A  + G  + A  ++  ++  G   ++  +N+ ++ + K   +    
Sbjct: 188 CDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDAR 247

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++ EMV  G   +  ++N ++   CK     EALS++  M + GI P+VV F  +I+  
Sbjct: 248 KVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVM 307

Query: 262 CQVGDLEFALKLFRKM-------------GVMSG--------DSVL-----------PNS 289
           C+ G+LE A+ L R+M              ++ G        D++L           P+ 
Sbjct: 308 CKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSV 367

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           V +N +ING+C +GR++ A E+   M   G+  +V TY+T++  Y + G +  A +L  +
Sbjct: 368 VCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQ 427

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M++ G++P+ + Y+S I  L  E  +  A  +  +MI   + PD  TY+ L  G C+ G 
Sbjct: 428 MLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGN 487

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG- 468
           V++A  LH+++++  ++ D  +Y++LIN L KS     A++LL  +     +P  I Y  
Sbjct: 488 VERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDA 547

Query: 469 --------------TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
                          L+ G+C  G +  A +VY+++       +  +Y+ +I+G C++ +
Sbjct: 548 LMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGN 607

Query: 515 LDAAKSLLQASQRIGLLDAITYN-TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  A S  +   + G     T   +LI G F  G + EA  +  ++ N     +      
Sbjct: 608 VMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKA 667

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIP 601
           LI+   K G      +++  M   G++P
Sbjct: 668 LIDLNLKEGNVDAVLDVLHGMARDGLLP 695


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 254/508 (50%), Gaps = 21/508 (4%)

Query: 143 KATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + +P V+  + L+R    +G  +       +++  G   ++  +N  +    K+  I   
Sbjct: 5   RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + L K M S G   N+ ++N++I  LC+E  ++EA  +   M   G  P+ V +N ++N 
Sbjct: 65  FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G+   AL +  +M V +G  V P+ VT+  +IN  CK   +  A E    M   G+
Sbjct: 125 YCKEGNFHQALVIHAEM-VRNG--VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N RTY TLIDG++R G   EA R+ +EM + G  P+ V YN+ IH       +E AL 
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V+ +M++K + PD  +YS +  G CR G + +AF++  +++E+ +  DA +Y+ LI  LC
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +   L  A  L   M+  GL PD  TY TLI+ YC  G++  A+ +++ M      P+ V
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 501 IYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNT---------------LINGYF 544
            Y+ +INGL K A    AK LL +      +   +TY+T               LI G+ 
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFC 421

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
           + G + EA  +F  M        +  YN++I+  C+ G   +A  L K MI  G +P  V
Sbjct: 422 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 481

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           T  TL+    K    EE+ E+  D + S
Sbjct: 482 TVITLIKALFKEGMNEEMSEVIGDTLRS 509



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 195/365 (53%), Gaps = 1/365 (0%)

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V PN  T+N +I GFC +G ++        M + G   NV TY TLID Y + G  +EA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L   M  +G+ PN + YN  I+ L  EG ++ A  +L +M  K   PD  TY+ L  G 
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G   QA  +H +++   +     +Y  LIN +CK+ NL  A +    M +RGL P+ 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY TLIDG+ + G +  A ++   M +    P++V YN+ I+G C    ++ A  ++Q 
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               GL  D ++Y+T+I+G+   G++  AF M  EM   G++ + V Y+ LI  LC+   
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A +L + M+  G+ PD  TYTTL+  +       + + LHD+M+  G  PD  TY+ 
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365

Query: 644 IISPL 648
           +I+ L
Sbjct: 366 LINGL 370



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 212/405 (52%), Gaps = 4/405 (0%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++S + PNV  +N++I   C VG+L+  L  F   G M  +  LPN VT+N +I+ +CK
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCF---GEMERNGCLPNVVTYNTLIDAYCK 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +GR++ A  +  +M   G+  N+ +Y  +I+G  R GS +EA  + +EM  +G  P+ V 
Sbjct: 58  MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ ++    EG+   AL + ++M+   + P   TY+ L   +C+   + +A +  +Q+ 
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  +  +Y  LI+   +   L  A ++L+ M   G  P ++TY   I G+C    +E
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A+ V + M +    P++V Y++II+G C+   LD A  + Q     G+  DA+TY++LI
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            G     ++ EA  +  EM ++G+  ++  Y  LIN  C  G   +A  L   MI  G +
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFL 357

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           PD VTY+ L+   +K     E   L   ++     P + TY+ +I
Sbjct: 358 PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 22/321 (6%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +P+V  ++A +     +   E A  V+Q++  KG +  + +++  +S   +  E+ R ++
Sbjct: 217 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 276

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + +EMV  G   +  T++ +I  LC+  +L EA  L   ML  G+ P+   +  +IN  C
Sbjct: 277 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 336

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGID 321
             GDL  AL L  +M +  G   LP++VT++ +ING  K  R   A+ + + +I +  + 
Sbjct: 337 VEGDLNKALHLHDEM-IHKG--FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVP 393

Query: 322 CNVRTYATLID---------------GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            +V TY TLI+               G+   G   EA R+ + MV+R   P   VYN  I
Sbjct: 394 SDV-TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVII 452

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           H     G++  A  +  +MI     P   T   L K L + G  ++  ++    L    +
Sbjct: 453 HGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRL 512

Query: 427 GDAYSYNILINYLCKSNNLAA 447
            +A    +L+    K  N+ A
Sbjct: 513 NEAELAKVLVEINHKEGNMEA 533



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 45/93 (48%)

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           ++ N   YNILI   C  G  Q+       M  +G +P+ VTY TL+  + K    +E  
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            L   M   G+ P+  +YN II+ L  E S ++
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKE 98


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 288/592 (48%), Gaps = 12/592 (2%)

Query: 56  PSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           P+L  + +  VV + R +P  AL F+ W        H ++S C I H+L+  R FD A  
Sbjct: 51  PNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATR 110

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPA-VFDALVRACTQIGATEGAYDVIQKLKV 174
           +   ++       LE L     S+    + P+ V+  L+    + G  + A D    +  
Sbjct: 111 VFDRMVG--QFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSK 168

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G S+S +A +  L  L+  + I    + Y+EM      + +  +  V  +  K  ++E+
Sbjct: 169 MGVSISHYAASEMLDLLIDSDRIDVILENYEEMC-----KGLGVYEFVFNSFLKRGEVEK 223

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            L+ +  +++ G+ P +V  N I+   C    +  A   F  M V SG S  PN VT + 
Sbjct: 224 GLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMM-VRSGPS--PNLVTFST 280

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +IN +CK  R++ A  +   MI+ GI  ++  Y+ LI+G  R G  EE   L    + RG
Sbjct: 281 LINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARG 340

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           +  + V+++S +      GD+  A+ V + M+ + I P+  TYSIL  GLCRNG V +A 
Sbjct: 341 VKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEAC 400

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +  Q+L++ +     +Y+ LI+  CKS NL     L   M+ +G +PD++    LI+G 
Sbjct: 401 GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGL 460

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDA 533
            + G ++ A++ +    K     N  ++N++I+G  +   + D  K  +       + D 
Sbjct: 461 SRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDV 520

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TY  L+ G    G++ EA A+F ++   G + + + Y  LI+  CK        ++ K+
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKL 580

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           M  +GI PD   Y  L+  F +    E V+EL  +++  G+ PD  TYN +I
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 224/456 (49%), Gaps = 15/456 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVI 169
           DA + +G+L  A  V      EG+         +P V  +  L+    + G    A  V 
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGI---------SPNVVTYSILINGLCRNGRVLEACGVF 403

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            ++  +G   S+  +++ +    K   +   + LY  M+  G+V +V   +++I  L ++
Sbjct: 404 GQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQ 463

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
             ++EAL  +++ +K G+  N   FN +I+   ++      LK++  MG+     V+P+ 
Sbjct: 464 GMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK---VIPDV 520

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+  ++ G  + GR++ A  + + ++K G   +   Y TLIDG+ +       L++   
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKL 580

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M   G+ P+  +YN  I+  F EG VE  L +L ++I   + PD  TY+ +  G C    
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +A KL   +       +A ++ ILI+  CK   +  A  + SSM+ RG  P+I+TY  
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRI 528
           LIDGY K  N E A ++YE M      PN+V Y+ +I+GLCK   ++ A    Q A  R 
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRH 760

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
            L D I Y  LI GY   G++AEA  ++  M   GI
Sbjct: 761 LLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 163/347 (46%), Gaps = 38/347 (10%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+   ++ G  + A     +   +G +++ + +N  +    +L       K+Y  M    
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK 515

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            + +V T+ +++  L ++ +L+EAL+L++++LK G  P+ + +  +I+  C+  D    L
Sbjct: 516 VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGL 575

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT-- 329
           ++F+   +M  + + P+   +N +IN F + G VE   E+   +IK G++ ++ TY T  
Sbjct: 576 QIFK---LMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632

Query: 330 ---------------------------------LIDGYARGGSSEEALRLCDEMVKRGLM 356
                                            LID Y + G  ++A+ +   M++RG  
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           PN + Y+  I   F   + E A  +   M+   + P+  +YSIL  GLC+ G +++A   
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLA 752

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
               +  H++ D  +Y ILI   CK   LA A  L   M+V G++PD
Sbjct: 753 FQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 146/298 (48%), Gaps = 5/298 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K  P V  +  LV+   + G  + A  +  +L  KG S     +   +    K  +    
Sbjct: 515 KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATG 574

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +++K M S G   ++  +N++I    +E  +E  L L   ++K G+ P++V +N +I  
Sbjct: 575 LQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICG 634

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C +     A+KLF    V+      PN++T   +I+ +CK GR++ A  I  +M++ G 
Sbjct: 635 YCSLKIFSKAIKLFE---VLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGP 691

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + N+ TY+ LIDGY +  ++E A  L ++M+   + PN V Y+  I  L  +G +E A  
Sbjct: 692 EPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASL 751

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
                I +H+ PD   Y IL +G C+ G + +A  L++ +L   ++ D      L  Y
Sbjct: 752 AFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEY 809



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 128/254 (50%), Gaps = 21/254 (8%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           LM +N + P           +IC     +++ L+    + G  E   ++++++   G   
Sbjct: 580 LMQSNGIFP-----------DIC-----IYNVLINMFFREGCVENVLELLREIIKYGLEP 623

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSL 238
            I  +N  +     L    +  KL+ E++ CG  + N  TF ++I A CK+ ++++A+ +
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           +  ML+ G  PN++ ++ +I+   +  + E A +L+ KM    GD V PN V+++ +I+G
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM---LGDRVSPNIVSYSILIDG 739

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK G +E A       I   +  +V  Y  LI GY + G   EA+ L D M+  G+MP+
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799

Query: 359 NVVYNSTIHWLFAE 372
           +++  +   + F +
Sbjct: 800 DLLQKALAEYGFQD 813


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 146/445 (32%), Positives = 235/445 (52%), Gaps = 5/445 (1%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ +M+      N+  FN V++ALCK   + EA  L  ++++ G+  N+  +N+ I   
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L  A++L   M   +    +P+ VT+N +I G CK    + A      M+  G  
Sbjct: 233 CEAGRLPEAVRLVDGMRAYA----VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 288

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY T+IDGY +    +EA  L  + V +G +P+ V Y S I+ L AEGDVE AL +
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            ++   K I PD   Y+ L KGLC  G +  A ++ N++ EE    D  +YNI+IN LCK
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             N++ A  +++  I++G +PD+ T+ TLIDGYCK   ++ A+Q+ E M +    P+ + 
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS++NGLCK   ++      Q     G   + ITYN LI  +  + K+ EA  +  +M 
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  + V +N LI   C+ G  + A  L + +   G      T+ TL+  FS   +  
Sbjct: 529 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 588

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
              ++ D+M+  G   D+ TY  +I
Sbjct: 589 MAEKIFDEMLSKGHRADSYTYRVLI 613



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 250/545 (45%), Gaps = 40/545 (7%)

Query: 143 KATPAVFDAL----VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           + +PA    L    +RA  + G    A D  +++ +     +  A+N  +  LV      
Sbjct: 44  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 103

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECK--------------------------- 231
           +  K+Y  M++ G   +++T  + + + C   +                           
Sbjct: 104 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLY 163

Query: 232 ----LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
                 +A  L+ +ML + ++PN+  FN +++  C+ GD+  A  L  K+ +  G S+  
Sbjct: 164 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV-IQRGMSI-- 220

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+N  I G C+ GR+  A  +   M    +  +V TY TLI G  +    +EA+   
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYL 279

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             M+ +G +P++  YN+ I        V+ A  +L D + K   PD  TY  L  GLC  
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V++A +L N+   + +  D   YN L+  LC    +  A Q+++ M   G  PDI TY
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             +I+G CK GNI  A  V  +       P++  +N++I+G CK   LD+A  L++    
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  D ITYN+++NG    GK+ E    F EM   G   N + YNILI   C+    ++
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +++  M   G+ PD V++ TL+  F +N   E    L   +   G S    T+N +I 
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 579

Query: 647 PLLGE 651
              G+
Sbjct: 580 AFSGK 584



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 241/492 (48%), Gaps = 5/492 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F+ ++ A  + G    A  ++ K+  +G S+++  +N ++  L +   +    +L   
Sbjct: 188 AAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDG 247

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M +   V +V T+N +I  LCK+   +EA+    RM+  G  P+   +N II+  C++  
Sbjct: 248 MRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 306

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A +L +   V  G   +P+ VT+  +ING C  G VE A E+       GI  ++  
Sbjct: 307 VQEATELLKD-AVFKG--FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 363

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +L+ G    G    AL++ +EM + G  P+   YN  I+ L   G++  A  V++D I
Sbjct: 364 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 423

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K   PD FT++ L  G C+   +  A +L  ++ E  +  D  +YN ++N LCK+  + 
Sbjct: 424 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 483

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              +    MI++G  P+ ITY  LI+ +C+   +E A +V   M +    P+ V +N++I
Sbjct: 484 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 543

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            G C++  L+ A  L Q  +  G    A T+NTLI  +     +  A  +F EM + G  
Sbjct: 544 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 603

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   Y +LI+  CK     +A   +  MI  G IP   T+  ++   + N    + + +
Sbjct: 604 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGI 663

Query: 626 HDDMVLSGVSPD 637
              MV  GV P+
Sbjct: 664 IHIMVKIGVVPE 675



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 6/424 (1%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           A P V  ++ L+R   +    + A   ++++  +G       +N  +    K++ +    
Sbjct: 252 AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 311

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L K+ V  G+V +  T+  +I  LC E  +E AL L+      GI P++V +N ++   
Sbjct: 312 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 371

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G +  AL++   M  M+ +   P+  T+N +ING CK+G +  A  +    I  G  
Sbjct: 372 CLQGLILHALQV---MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 428

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+ TLIDGY +    + AL+L + M + G+ P+ + YNS ++ L   G V      
Sbjct: 429 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 488

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +MI K   P+  TY+IL +  CR+  +++A K+  ++ +E +  DA S+N LI   C+
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 548

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L  A  L   +  +G      T+ TLI  +    N+  A ++++ M     + +   
Sbjct: 549 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 608

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +I+G CK A++D A   L    + G + ++ T+  +IN   +N ++ +A  +   M 
Sbjct: 609 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 668

Query: 561 NVGI 564
            +G+
Sbjct: 669 KIGV 672


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 259/484 (53%), Gaps = 5/484 (1%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + AY ++++L+ +G   S+ ++N+ L+ L K  ++     L+  M       N++T+N++
Sbjct: 333 DDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAK-PNISTYNII 391

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I  LC   ++ EA  +   M  +G++PN++  N++++  C+   LE A ++F      S 
Sbjct: 392 IDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA---SE 448

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               PNSVT+  +I+G  K G+++ A  +   M+ AG D N   Y +LI  +   G  E+
Sbjct: 449 RGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKED 508

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
             ++  EM++RG  P+  + N+ +  +F  G+VE    +  DM      PD  +YSIL  
Sbjct: 509 GHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIH 568

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GL + G  ++   +   + ++    DA +YN +++ LCKS  +  A ++L  M V+ + P
Sbjct: 569 GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHP 628

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            + TYG+++DG  K   ++ A  ++E  K    + N+++Y+S+I+G  K   +D A  +L
Sbjct: 629 TVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLIL 688

Query: 523 QASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +   + GL   + T+N+L++      +I EA   F  M+ +  + N   Y+ILIN LC+ 
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
             Y +A    + M   G+IP+ VTYTT+++  +K  +  +   L +    +G  PD+ ++
Sbjct: 749 QKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASF 808

Query: 642 NAII 645
           NA+I
Sbjct: 809 NALI 812



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 147/608 (24%), Positives = 266/608 (43%), Gaps = 64/608 (10%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSP--------------------LEFLEGLLD 137
            A+V  LV  RR +DA  ++G +       P                    LE L  + D
Sbjct: 145 AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQD 204

Query: 138 -SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
             YE+  + P +F  LVRA  + G  E A  ++ ++K       I  +N  +    K   
Sbjct: 205 VGYEV--SVP-LFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGS 261

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY----------------- 239
           +   WK + E+ + G   +  ++  +++ LCK  +L EA  L+                 
Sbjct: 262 VDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNT 321

Query: 240 ------------------YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
                              R+ + G  P+VV FN I+    +   ++ AL LF    VM 
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF---DVMK 378

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
            D+  PN  T+N II+  C  GRV  A +IR  M  AG+  N+ +   ++D   +    E
Sbjct: 379 KDAK-PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLE 437

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA R+ +   +RG  PN+V Y S I  L  +G ++ A  +   M+D     +   Y+ L 
Sbjct: 438 EAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           +    +G  +   K++ +++      D    N  ++ + K+  +   + +   M   G +
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD+ +Y  LI G  K G       +++ M +     +   YN++++GLCK   +D A  +
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617

Query: 522 LQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L+  +   +   + TY ++++G     ++ EA+ +F E ++ GI +N + Y+ LI+   K
Sbjct: 618 LEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGK 677

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A  +++ M+  G+ P+  T+ +L+    K    +E +     M     SP+  T
Sbjct: 678 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYT 737

Query: 641 YNAIISPL 648
           Y+ +I+ L
Sbjct: 738 YSILINGL 745



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 241/509 (47%), Gaps = 33/509 (6%)

Query: 20  FHVGKQFANP--STEDIVFRAICVNLR-QRKWKILEQMA-----PSLTNSLVNRVVSEFR 71
           F V K+ A P  ST +I+   +C+  R    +KI ++M      P+L +  VN +V    
Sbjct: 374 FDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLS--VNIMVDRLC 431

Query: 72  KSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL 129
           K+ +L  A   +    E     +S+ + C+++  L    + DDA  L   ++ A      
Sbjct: 432 KANQLEEAHRIFESASERGCNPNSV-TYCSLIDGLGKKGKIDDAYRLFEKMLDAGH---- 486

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
                         A P ++ +L+R     G  E  + + +++  +G    +   N ++ 
Sbjct: 487 -------------DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMD 533

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            + K  E+ +   ++++M S G++ +V +++++I+ L K  +  E  +++  M + G   
Sbjct: 534 CVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFAL 593

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +   +N +++  C+ G ++ A ++  +M V     V P   T+  I++G  K+ R++ A 
Sbjct: 594 DARAYNAVVDGLCKSGKVDKAYEVLEEMKV---KHVHPTVATYGSIVDGLAKIDRLDEAY 650

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +       GI+ NV  Y++LIDG+ + G  +EA  + +EM+K+GL PN   +NS +  L
Sbjct: 651 MLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDAL 710

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               +++ AL     M +    P+ +TYSIL  GLCR     +AF    ++ ++ ++ + 
Sbjct: 711 VKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNV 770

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +Y  +I+ L K  N+  A  L       G IPD  ++  LI+G         A QV+E 
Sbjct: 771 VTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEE 830

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            +    + N+    S+++ L K   L+ A
Sbjct: 831 TRLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 164/371 (44%), Gaps = 1/371 (0%)

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           LPN      ++    +  R+E A  +  AM           Y  LI   A     E AL 
Sbjct: 139 LPNPACA-ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALE 197

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L  +M   G   +  ++ + +  L  EG +E AL ++ ++    + PD   Y++      
Sbjct: 198 LLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFG 257

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G V  A+K  +++    +  D  SY  ++  LCK+  L  A++L   M     +P   
Sbjct: 258 KAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAY 317

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            Y T+I GY      + A ++ E +++    P++V +NSI+  L K   +D A +L    
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           ++    +  TYN +I+   + G++ EA+ +  EM   G+  N +  NI+++ LCK    +
Sbjct: 378 KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLE 437

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  + +     G  P+ VTY +L+    K    ++   L + M+ +G   +   Y ++I
Sbjct: 438 EAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497

Query: 646 SPLLGEKSAED 656
                    ED
Sbjct: 498 RNFFMHGRKED 508



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 140/347 (40%), Gaps = 36/347 (10%)

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++ +EM   G    N    + +  L     +E A  V+  M      P    Y++L   L
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGAL 186

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
                 ++A +L  Q+ +         +  L+  L +   +  A  L+  +    L PDI
Sbjct: 187 AEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDI 246

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-Q 523
           + Y   ID + K G+++ A + +  +K    +P+ V Y S++  LCK   L  A+ L  Q
Sbjct: 247 VLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQ 306

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG-----IAVNKV--------- 569
                 +  A  YNT+I GY    +  +A+ +   +R  G     ++ N +         
Sbjct: 307 MEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRK 366

Query: 570 --------------------GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
                                YNI+I+ LC  G   +A ++   M L G+ P+ ++   +
Sbjct: 367 VDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           V R  K    EE   + +     G +P++ TY ++I   LG+K   D
Sbjct: 427 VDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDG-LGKKGKID 472


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 174/609 (28%), Positives = 295/609 (48%), Gaps = 18/609 (2%)

Query: 50  ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHL---LVN 106
           I  +++P   +SL+    S     PKL L+F+ W    +R   +  S+ A   L   L  
Sbjct: 73  IPSRLSPDAVSSLIFGGRSH-SLHPKLLLDFFYW----SRPRIAPPSADAFARLAASLCA 127

Query: 107 WRRFDDALLLMGNLMSANSVSPL---EFLEGLLDSYEICKA---TPAVFDALVRACTQIG 160
              F  A  L+  ++ A+   PL        + D+    ++   + AV D LV    + G
Sbjct: 128 ASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTG 187

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
           +   A  V+  +   G + +    N  L  L++ + +   WKL   M   G + +V T++
Sbjct: 188 SVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYS 247

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
             I A CK    + A  ++  M +     N V +N++I+  C+ G +E A   F++  V 
Sbjct: 248 TFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG-FKEEMVD 306

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
            G S  P++ T+  ++NG CK  R++ A+ +   M  +G+  N+  Y TL+DG+ + G +
Sbjct: 307 YGLS--PDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKT 364

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
            EA  +  EM+  G+ PN ++Y++ I  L   G +  A  +L +MI   + PD FTY+ L
Sbjct: 365 AEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPL 424

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
            +G  +      AF+L N++    ++ + YSY I+IN LC++     A  LL  MI  GL
Sbjct: 425 MQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGL 484

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P+   Y  LI G+ K GNI  A +  E M K    P+L  YNS+I GL     ++ A+ 
Sbjct: 485 KPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                Q+ GL+ D  TY+ LI+GY   G + +A  +  +M N G+  N   Y  L+    
Sbjct: 545 YYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYF 604

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K   Y++   +++ M+  G  PD   Y  ++   S++ + E    +  ++  +G+ PD  
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 664

Query: 640 TYNAIISPL 648
            Y+++IS L
Sbjct: 665 IYSSLISGL 673



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 255/506 (50%), Gaps = 4/506 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++    + GA E A+   +++   G S     +   ++ L K + +    
Sbjct: 274 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAK 333

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EM   G   N+  +  ++    KE K  EA  +   M+ +G+ PN + ++ +I   
Sbjct: 334 ALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGL 393

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++G L  A KL ++M +  G  + P++ T+N ++ G  +    + A E+   M  +GI 
Sbjct: 394 CKIGQLGRASKLLKEM-IKVG--LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL 450

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV +Y  +I+G  + G S+EA  L +EM+  GL PN  +Y   I     EG++  A   
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEA 510

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M   ++ PD F Y+ L KGL   G +++A + + QV +  +V D ++Y+ LI+  CK
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 570

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + NL  A QLL  M+  GL P+  TY  L++GY K  + E    + ++M     KP+  I
Sbjct: 571 TGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHI 630

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +I  L +  +++ A  +L   ++ GL+ D   Y++LI+G      + +A  +  EM 
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+    V YN LI+  C+ G   +AR +   ++  G++P+ VTYT L+    KN    
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIIS 646
           +  +L+ +M+  G++PD   YN + +
Sbjct: 751 DAFDLYKEMLDRGIAPDAFVYNVLAT 776



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 250/524 (47%), Gaps = 36/524 (6%)

Query: 127 SPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           S L+  + LLD        P   V+  LV    + G T  A+D+++++   G   +   +
Sbjct: 327 SRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMY 386

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           +N +  L K+ ++GR  KL KEM+  G   +  T+N ++    ++   + A  L   M  
Sbjct: 387 DNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRN 446

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GV---------------------- 279
           SGI PNV  + ++IN  CQ G+ + A  L  +M   G+                      
Sbjct: 447 SGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISL 506

Query: 280 -------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
                  M+  +V P+   +N +I G   +GR+E AEE    + K G+  +  TY+ LI 
Sbjct: 507 ACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIH 566

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GY + G+ E+A +L  +M+  GL PN   Y   +   F   D E    +L  M+     P
Sbjct: 567 GYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKP 626

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D+  Y I+ + L R+  ++ AF +  +V +  +V D + Y+ LI+ LCK  ++  A  LL
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLL 686

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M   GL P I+ Y  LIDG+C+ G+I  A  V++++      PN V Y ++I+G CK+
Sbjct: 687 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKN 746

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  A  L +     G+  DA  YN L  G      + +A  +  EM N G A N   +
Sbjct: 747 GDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLF 805

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           N L++  CK G  Q+  +L+ VM+   I+P+  T   +V+ F K
Sbjct: 806 NTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGK 849



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 188/415 (45%), Gaps = 10/415 (2%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  K    ++  L+   ++ G    A + ++K+        +  +N+ +  L  +  +  
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             + Y ++   G V +  T++ +I+  CK   LE+A  L  +ML SG+ PN   +  ++ 
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              +  D E    + + M + SGD   P++  +  +I    +   +E A  +   + K G
Sbjct: 602 GYFKSNDYEKVSSILQSM-LGSGDK--PDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  ++  Y++LI G  +    E+A+ L DEM K GL P  V YN+ I      GD+  A 
Sbjct: 659 LVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRAR 718

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V   ++ K + P+  TY+ L  G C+NG +  AF L+ ++L+  +  DA+ YN+L    
Sbjct: 719 NVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGC 778

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
             + +L  A  L   M  RG   ++  + TL+ G+CK G ++   ++   M   E  PN 
Sbjct: 779 SDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNA 837

Query: 500 VIYNSIINGLCKDASLDAAKSLL------QASQRIGLLDAITYNTLINGYFINGK 548
                +++   K   L  A  +       +ASQ      ++ +  +IN   I  K
Sbjct: 838 QTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKGLIPPK 892



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 2/200 (1%)

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           R   P       L+D Y K G++  A QV   M  +   P     N ++  L +  +++ 
Sbjct: 167 RSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMEL 226

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
              L    +  G+L D  TY+T I  +        A  +F EMR    A+N+V YN++I+
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS 286

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LC+ G  ++A    + M+ +G+ PD  TY  L+    K    +E   L D+M  SG+ P
Sbjct: 287 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKP 346

Query: 637 DNQTYNAIISPLLGE-KSAE 655
           +   Y  ++   + E K+AE
Sbjct: 347 NIVVYGTLVDGFMKEGKTAE 366


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/650 (25%), Positives = 292/650 (44%), Gaps = 94/650 (14%)

Query: 76  LALEFYTWV-----GENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           LAL+F  WV      E N  +H + ++    H+LV  R +  A   + +++  + V    
Sbjct: 38  LALKFLNWVIKKPNLEINHLTHIISTT---THILVKARMYGYAKTTLSHMLHMD-VGFNN 93

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
               L+++Y  C + PAVFD L+R C +      A +  + +  +G S S+   N  L  
Sbjct: 94  VFGALMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGS 153

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           LVK  E+  FW  +KEM++     NV TFN+++ ALC+  K + A  L  +M ++G +P 
Sbjct: 154 LVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPT 213

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGV------------------------------- 279
            V +N ++N  C+ G  + A +L   M                                 
Sbjct: 214 AVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILR 273

Query: 280 -MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M  + V PN +T+N +ING  K G++  A ++   M    +  N  TY TLI G+   G
Sbjct: 274 RMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNG 333

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           + EEALRLCD MV  GL PN V Y + ++ +           VL  M    +   H +Y+
Sbjct: 334 NIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYT 393

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            +  GLC+NG +++A +L + +L+  +  D  ++++L+N   K+                
Sbjct: 394 TMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKT---------------- 437

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL+P+ + + TLI  YCK GN++ A+  Y  M +     +    + ++   C+   L+ A
Sbjct: 438 GLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEA 497

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG-------------- 563
           +  +    R+GL   ++T++ +I+ Y  +G   +AF++F +M ++G              
Sbjct: 498 EYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKG 557

Query: 564 ---------------------IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
                                 A+    YN ++    + G    A  L+  M+++  +PD
Sbjct: 558 LLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPD 617

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSG-VSPDNQTYNAIISPLLGE 651
             TYT+L+    +       + L    +  G +SP+   Y +++  LL E
Sbjct: 618 SFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKE 667



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 237/522 (45%), Gaps = 59/522 (11%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  ++ LVK  +IG   K+++EM  C  + N  T+N +I+  C    +EEAL L   M
Sbjct: 286 TYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVM 345

Query: 243 LKSGIWPNVVCFNMIINEA-----------------------------------CQVGDL 267
           +  G+ PN V +  ++N                                     C+ G L
Sbjct: 346 VSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLL 405

Query: 268 EFALKLFRKMGVMS----------------GDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           E A++L   M  +S                   ++PN V H+ +I  +CK+G ++ A   
Sbjct: 406 EEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNA 465

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M ++G   +  T + L+  + R G  EEA    D M + GL P++V ++  I     
Sbjct: 466 YAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGN 525

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA-FKLHNQVLEEHMVGDAY 430
            GD   A  V   M      P  FTY  L KGL   G + +A   +H      + +G  +
Sbjct: 526 SGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTF 585

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            YN ++    +S NL+ A  LL  M++   +PD  TY +LI G C+ G +  A+ +  + 
Sbjct: 586 -YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLL--SG 642

Query: 491 KKVEK---KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           + +EK    PN  +Y S+++GL K+    AA  + +     G+  DAI +N L++ Y   
Sbjct: 643 RAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRK 702

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           GK+++   + S MR+  +  N   YNIL++   K     +  +L   MI+HG  PD +T+
Sbjct: 703 GKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTW 762

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +L+  + K+ S +  ++    + + G   D  T N ++S L
Sbjct: 763 HSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKL 804



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/530 (23%), Positives = 225/530 (42%), Gaps = 94/530 (17%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN------------------ 259
           ++  +I  LCK   LEEA+ L   MLK  + P++V F++++N                  
Sbjct: 391 SYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLI 450

Query: 260 -EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              C++G+L+ AL  +    VM+    + +  T + ++  FC+ GR+E AE     M + 
Sbjct: 451 YNYCKMGNLKEALNAY---AVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRM 507

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN-------------------- 358
           G+  +  T+  +ID Y   G + +A  + D+M   G +P+                    
Sbjct: 508 GLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEA 567

Query: 359 ---------------NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
                          +  YN+ +      G++  A+ +L +M+  +  PD FTY+ L  G
Sbjct: 568 KIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAG 627

Query: 404 LCRNGCV------------------------------------KQAFKLHNQVLEEHMVG 427
           LCR G +                                    K A  +   +L E +  
Sbjct: 628 LCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQP 687

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           DA ++N+L++   +   ++    +LS+M  R L  ++ TY  L+ GY K   +    ++Y
Sbjct: 688 DAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLY 747

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
             M      P+ + ++S+I G CK  SLD A   L+     G  +D  T N L++     
Sbjct: 748 NEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCER 807

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            +I  AF +  ++  +G+  N   YN L N   +   + +AR ++  ++ +G  P    +
Sbjct: 808 NEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQF 867

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           TTL+    +  + +  +EL D+M + GVS      +AII  L   +  ++
Sbjct: 868 TTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDE 917



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 224/528 (42%), Gaps = 69/528 (13%)

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K+  +      Y  M   G+V +  T ++++ + C+  +LEEA      M + G+ P+ V
Sbjct: 455 KMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSV 514

Query: 253 CFNMIINEACQVGDLEFALKLFRKMG-----------------------------VMSGD 283
            F+ II+     GD   A  +F KM                               M   
Sbjct: 515 TFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRP 574

Query: 284 SVLP---NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           S +P    S  +N ++    + G +  A  +   M+      +  TY +LI G  R G  
Sbjct: 575 SSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKM 634

Query: 341 EEALRLCDEMVKRGLM-PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             AL L    +++GL+ PN  +Y S +  L  EG  + AL++  DM+++ + PD   +++
Sbjct: 635 VPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNV 694

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L     R G + +   + + +    +  +  +YNIL++   K + +A   +L + MI+ G
Sbjct: 695 LLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHG 754

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQ---------------------------------- 485
             PD +T+ +LI GYCK G+++ AV+                                  
Sbjct: 755 FAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAF 814

Query: 486 -VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGY 543
            + + +  +   PN+  YNS+ NG  +  S D A+ +L A    G       + TLI G 
Sbjct: 815 DLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGM 874

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G +  A  +  EM+ +G++   V  + +I  L +     +A  ++ +M+   IIP  
Sbjct: 875 CRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTV 934

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            T+TTL+  + K  +  + +EL   M    V  D   YN +IS L  +
Sbjct: 935 ATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCAD 982



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 211/443 (47%), Gaps = 7/443 (1%)

Query: 184  WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
            +N  L+   +   +     L  EMV   +V +  T+  +I  LC++ K+  AL L  R +
Sbjct: 586  YNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAI 645

Query: 244  KSGIW-PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            + G+  PN   +  +++   + G  + AL +F  M     + V P+++  N +++ + + 
Sbjct: 646  EKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDM---LNEGVQPDAIAFNVLLDRYSRK 702

Query: 303  GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
            G++    +I   M    +  N+ TY  L+ GY++        +L +EM+  G  P+ + +
Sbjct: 703  GKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTW 762

Query: 363  NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            +S I      G ++ A+  L  +  +    D FT ++L   LC    +K AF L  Q+  
Sbjct: 763  HSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNM 822

Query: 423  EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
              +  +  +YN L N   ++ +   A+ +L +++  G  P    + TLI G C+ GN++G
Sbjct: 823  LGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKG 882

Query: 483  AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLIN 541
            A+++ + MK +      V  ++II GL +    D A  +L     + ++  + T+ TL++
Sbjct: 883  AMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMH 942

Query: 542  GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
             Y   G +A+A  + S M    + ++   YN+LI+ LC  G  Q A +L + M    I P
Sbjct: 943  TYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWP 1002

Query: 602  DYVTYTTLVTRFSKNCSPEEVIE 624
            +   Y  L+  F   C+   ++E
Sbjct: 1003 NTSIYIVLIDSFL--CTGNYIVE 1023



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/409 (23%), Positives = 190/409 (46%), Gaps = 4/409 (0%)

Query: 116  LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
            L+  L     + P   L G      +    PA++ +LV    + G ++ A  + + +  +
Sbjct: 624  LIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNE 683

Query: 176  GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
            G      A+N  L    +  ++ +   +   M S     N+ T+N++++   K   +   
Sbjct: 684  GVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARC 743

Query: 236  LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
              LY  M+  G  P+ + ++ +I   C+ G L+ A+K  RK+ V   +    +  T N +
Sbjct: 744  SKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITV---EGFKVDCFTLNVL 800

Query: 296  INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
            ++  C+   ++ A ++   +   G+  NV TY +L +G+ R  S +EA  +   +++ G 
Sbjct: 801  VSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGY 860

Query: 356  MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             P    + + I  +   G+V+GA+ +  +M    +       S + +GL R+    +A +
Sbjct: 861  APTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATR 920

Query: 416  LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
            +   +LE  ++    ++  L++  CK  N+A A +L S M    +  D+  Y  LI G C
Sbjct: 921  ILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLC 980

Query: 476  KGGNIEGAVQVYENMKKVEKKPNLVIYNSIING-LCKDASLDAAKSLLQ 523
              G+I+ A ++YE M++ +  PN  IY  +I+  LC    +  ++ LL+
Sbjct: 981  ADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLR 1029



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 175/383 (45%), Gaps = 41/383 (10%)

Query: 115  LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
            L+ G L   +S + L   E +L+  E  +     F+ L+   ++ G      D++  ++ 
Sbjct: 660  LVDGLLKEGHSKAALYMFEDMLN--EGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRS 717

Query: 175  KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            +    ++  +N  L    K + + R  KLY EM+  G+  +  T++ +I   CK   L+ 
Sbjct: 718  RSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDV 777

Query: 235  ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            A+    ++   G   +    N+++++ C+  +++ A  L +++ ++    V PN  T+N 
Sbjct: 778  AVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLG---VTPNVDTYNS 834

Query: 295  IINGF-----------------------------------CKLGRVEFAEEIRYAMIKAG 319
            + NGF                                   C++G V+ A E++  M   G
Sbjct: 835  LFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILG 894

Query: 320  IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            +       + +I G AR   ++EA R+   M++  ++P    + + +H    EG+V  AL
Sbjct: 895  VSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKAL 954

Query: 380  FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN-Y 438
             + S M   H+  D   Y++L  GLC +G ++ AFKL+ ++ +  +  +   Y +LI+ +
Sbjct: 955  ELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSF 1014

Query: 439  LCKSNNLAAAKQLLSSMIVRGLI 461
            LC  N +  +++LL  +  R L+
Sbjct: 1015 LCTGNYIVESEKLLRDLRTRELM 1037


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 216/408 (52%), Gaps = 3/408 (0%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           +  +G  P+   +N  +      GDL  A+ + R+MG     +  PN+ ++N +I G  +
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMG--RDGAPPPNAFSYNVVIAGMWR 208

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A E+   M +  +  N  TY T+IDG+ +GG  E    L D+MV  GL PN + 
Sbjct: 209 AGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAIT 268

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  +  L   G +     +L +M  + + PD FTYSIL  GL RNG  K    L  + L
Sbjct: 269 YNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSL 328

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  +    Y+ +IL+N LCK   ++ A+++L S++  GL+P  + Y TLI+GYC+ G +E
Sbjct: 329 KNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELE 388

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLI 540
           GA   +  MK    KP+ + YN++INGLCK   +  A+ LL   Q  G+   + T+NTLI
Sbjct: 389 GAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLI 448

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           + Y   G++ + F + SEM+  G+  N V Y  ++N  CK G   +A  ++  M    ++
Sbjct: 449 DAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVL 508

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+   Y  ++  + ++   ++   L + M  +G+SP   TYN +I  L
Sbjct: 509 PNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 242/481 (50%), Gaps = 5/481 (1%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKEC 230
           L   G      AWN  +   V   ++G    + + M   G    N  ++N+VI  + +  
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +  +A+ ++  M +  + PN + +N +I+   + GDLE    L  +M V  G  + PN++
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM-VCHG--LKPNAI 267

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +++G C+ GR+     +   M    +  +  TY+ L DG +R G S+  L L  + 
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +K G+   +   +  ++ L  +G V  A  VL  +++  + P    Y+ L  G C+ G +
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           + AF    Q+   H+  D  +YN LIN LCK+  +  A+ LL  M   G+ P + T+ TL
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIG 529
           ID Y + G +E    V   M++   KPN+V Y SI+N  CK+  +  A ++L     +  
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           L +A  YN +I+ Y  +G   +AF +  +M++ GI+ + V YN+LI  LC      +A E
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++  +  H +IPD V+Y TL++      + ++ ++L   M   G+    +TY+ +IS L 
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 627

Query: 650 G 650
           G
Sbjct: 628 G 628



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 219/451 (48%), Gaps = 10/451 (2%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +   +K  ++   + L  +MV  G   N  T+N+++  LC+  ++ E  +L   M 
Sbjct: 234 YNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMA 293

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFC 300
              + P+   ++++ +   + GD +  L LF K    GV  GD       T + ++NG C
Sbjct: 294 SQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGD------YTCSILLNGLC 347

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G+V  AEE+  +++ AG+      Y TLI+GY + G  E A     +M  R + P+++
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 407

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN+ I+ L     +  A  +L +M D  + P   T++ L     R G +++ F + +++
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E  +  +  SY  ++N  CK+  +  A  +L  M  + ++P+   Y  +ID Y + G  
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 527

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           + A  + E MK     P++V YN +I GLC  + +  A+ ++ +     L+ DA++YNTL
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 587

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+     G I +A  +   M   GI      Y+ LI+ L   G   +   L + M+ + +
Sbjct: 588 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNV 647

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +P    +  +V  +SK  +  +  +L  +M+
Sbjct: 648 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 678



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 128/276 (46%), Gaps = 3/276 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++AL+    +      A D++ +++  G + ++  +N  +    +  ++ + + +  EM
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV ++  ++ A CK  K+ EA+++   M    + PN   +N II+   + G  
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 527

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L  KM     + + P+ VT+N +I G C   ++  AEEI  ++    +  +  +Y
Sbjct: 528 DQAFILVEKM---KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 584

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI      G+ ++AL L   M K G+      Y+  I  L   G +    ++   M+ 
Sbjct: 585 NTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQ 644

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
            ++ P +  ++I+ +   + G   +A  L  ++L++
Sbjct: 645 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 108/219 (49%), Gaps = 3/219 (1%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   F+ L+ A  + G  E  + V+ +++  G   ++ ++ + ++   K  +I     + 
Sbjct: 440 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            +M     + N   +N +I A  +    ++A  L  +M  +GI P++V +N++I   C  
Sbjct: 500 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 559

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             +  A ++   +   S   ++P++V++N +I+  C  G ++ A +++  M K GI   V
Sbjct: 560 SQISEAEEIINSL---SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 616

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           RTY  LI G    G   E   L  +M++  ++P+N ++N
Sbjct: 617 RTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHN 655


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 176/635 (27%), Positives = 298/635 (46%), Gaps = 53/635 (8%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSC---AIVHLLVNWRRFDDALLLMGNLMSANSVSP 128
           K P+  + F+ W   +   +   +S     ++V  L++  +F DA  L+ + +  +  S 
Sbjct: 53  KKPETLVSFFQWAQSSIPEAFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSYIRTSDAS- 111

Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L     LL         P  A+FD  + A    G    A  V QK+       ++   N 
Sbjct: 112 LSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNT 171

Query: 187 FLSHLVKLNE---IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
            L  LV+      I    +++ +MV  G   +V TFN+++   C E KLE+AL +  RM+
Sbjct: 172 LLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMV 231

Query: 244 ------------------------------------KSGIWPNVVCFNMIINEACQVGDL 267
                                               ++G+ PN V +N ++   C++G L
Sbjct: 232 SEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSL 291

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A   F+ + +M   ++LP+  T+N +ING C  G +    E+   M    +  +V TY
Sbjct: 292 KEA---FQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTY 348

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG    G S EA +L ++M   G+ PN V +N ++ WL  E   E     + ++++
Sbjct: 349 NTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVE 408

Query: 388 KH-ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            H   PD  TY  L K   + G +  A ++  ++ ++ +  +  + N +++ LCK   + 
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVD 468

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL S   RG I D +TYGTLI GY +   +E A ++++ MK+++  P +  +NS+I
Sbjct: 469 EAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLI 528

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLC     + A          GLL D  T+N++I GY   G++ +AF  ++E       
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +    NIL+N LCK G  ++A      +I    + D VTY T+++ F K+   +E  +L
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDL 647

Query: 626 HDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
             +M    + PD  TYN+II+ L+  G+ S  D++
Sbjct: 648 LSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADEL 682



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 227/485 (46%), Gaps = 20/485 (4%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           + +DAL ++  ++S  +V+P                    ++ +++A ++ G      D+
Sbjct: 219 KLEDALGMLERMVSEFNVNP----------------DNVTYNTILKAMSKKGRLSDVKDL 262

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +  +K  G   +   +NN +    KL  +   +++ + M     + ++ T+N++I  +C 
Sbjct: 263 LLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCN 322

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
              + E L L   M    + P+VV +N +I+   ++G    +L+  + M  M  D V PN
Sbjct: 323 AGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELG---LSLEAKKLMEQMENDGVKPN 379

Query: 289 SVTHNCIINGFCKL-GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
            VTHN  +   CK   R E   +++  +   G   ++ TY TLI  Y + G    AL + 
Sbjct: 380 QVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMM 439

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM ++G+  N +  N+ +  L  E  V+ A  +L     +    D  TY  L  G  R 
Sbjct: 440 REMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFRE 499

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             V++AF++ +++    +     ++N LI  LC       A +    +   GL+PD  T+
Sbjct: 500 EKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTF 559

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            ++I GYCK G +E A + Y    K   KP+    N ++NGLCK+   + A +       
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIT 619

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
              +D +TYNT+I+ +  + K+ EA+ + SEM    +  ++  YN +I  L + G   +A
Sbjct: 620 EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEA 679

Query: 588 RELMK 592
            EL+K
Sbjct: 680 DELLK 684



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 182/408 (44%), Gaps = 66/408 (16%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           DV++ LK++   V+   +N  +    +L       KL ++M + G   N  T N+ +  L
Sbjct: 334 DVMKSLKLQPDVVT---YNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWL 390

Query: 227 CKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           CKE K EE       +++  G  P++V ++ +I    +VGDL  AL++ R+MG      +
Sbjct: 391 CKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG---QKGI 447

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG-------- 337
             N++T N I++  CK  +V+ A  +  +  K G   +  TY TLI GY R         
Sbjct: 448 KMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFE 507

Query: 338 ---------------------------GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
                                      G +E A+   DE+ + GL+P++  +NS I    
Sbjct: 508 MWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYC 567

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            EG VE A    ++ I     PD++T +IL  GLC+ G  ++A    N ++ E  V D  
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTV 626

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV---- 486
           +YN +I+  CK   L  A  LLS M  + L PD  TY ++I    + G +  A ++    
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686

Query: 487 ---YENMKK-----VEKKP-----------NLVIYNSIINGLCKDASL 515
              + +MK+      EK P             + Y+ +IN LC    L
Sbjct: 687 SGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRL 734



 Score = 42.4 bits (98), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 21/179 (11%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++++    + G  E A++   +          +  N  L+ L K     +    +  +
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           ++   V+ V T+N +I A CK+ KL+EA  L   M +  + P+   +N II    + G L
Sbjct: 618 ITEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKL 676

Query: 268 EFALKLFR----KMGVM----------------SGDSVLPNSVTHNCIINGFCKLGRVE 306
             A +L +    K G M                S + +   ++ ++ +IN  C  GR++
Sbjct: 677 SEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRLK 735


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 257/536 (47%), Gaps = 44/536 (8%)

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEI 141
           W+     F H+ +S CA+ + L   + F +   ++  L+S     S       +LD+   
Sbjct: 90  WLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG- 148

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            + +  VFDAL+ A    G    A    + ++     +  H     L  ++  N     W
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             Y E++  G+   V  +N++I   CKE  + +A  ++  + K G+ P  V FN +IN  
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+  +L+     FR    M  + + P+  T++ +I+G CK GR++ AE++   M + G+ 
Sbjct: 269 CKSRNLDEG---FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLR 325

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  T+  LIDG  R    + A+    +M+  G+ P+ V+YN+ ++ L   GDV  A  +
Sbjct: 326 PNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           + +M    + PD  TY+ L  G C+ G ++ A ++   + EE +V D  ++  LI+  C+
Sbjct: 386 VDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A++ L  M+  G+ PD  TY  +IDGYCK GN++   ++ + M+    KP ++ 
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN ++NGLCK   +  A  LL+A   +G+  D ITYN L+ G+  NGK            
Sbjct: 506 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK------------ 553

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
                                     A +L+K+    G+I DY  YT+LV+ ++K+
Sbjct: 554 --------------------------AEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 191/361 (52%), Gaps = 4/361 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P    +N +IN FCK G +  A+ I   + K G+     ++ TLI+G  +  + +E  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M +  + P+   Y+  IH L  EG ++ A  +  +M  + + P+  T++ L  G  R
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +  +  A   ++Q+L   +  D   YN L+N LCK  ++  A++L+  M + G+ PD IT
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDGYCK G++E A+++ + M +     + V + ++I+G C+D  +  A+  L+   
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D  TY  +I+GY   G +   F +  EM+  G     + YN+L+N LCK G  +
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  L++ M+  G+ PD +TY  L+    KN   E++++L ++    G+  D   Y +++
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLV 577

Query: 646 S 646
           S
Sbjct: 578 S 578



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 163/301 (54%), Gaps = 1/301 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G  P    YN  I+    EG +  A  + +++  + + P   +++ L  GLC++ 
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L   + E  +  D ++Y++LI+ LCK   L  A+QL   M  RGL P+ IT+ 
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            LIDG  +   ++ A+  Y  M  +  KP+LV+YN+++NGLCK   ++ A+ L+   + +
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMV 392

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  D ITY TLI+GY   G +  A  +   M   G+ ++ V +  LI+  C+ G  + A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
              ++ M+  G+ PD  TYT ++  + K  + +   +L  +M ++G  P   TYN +++ 
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512

Query: 648 L 648
           L
Sbjct: 513 L 513



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 142/264 (53%), Gaps = 1/264 (0%)

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           S++++    P    Y+IL    C+ G ++ A  + N++ +  +     S+N LIN LCKS
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            NL    +L  +M    + PD+ TY  LI G CK G ++ A Q+++ M++   +PN + +
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+G  +   +D+A +       +G+  D + YNTL+NG    G + +A  +  EM+ 
Sbjct: 332 TALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKM 391

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           VG+  +K+ Y  LI+  CK G  + A E+ K M   G++ D V +T L++ F ++    +
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
                 +MV +G+ PD+ TY  +I
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVI 475



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 2/256 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P H    +L K +  N  V   +  ++++LE         YNILIN  CK  ++  AK +
Sbjct: 187 PFHGCGYLLDKMINSNSPV-TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLI 245

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
            + +  RGL P  +++ TLI+G CK  N++   ++ + M++    P++  Y+ +I+GLCK
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  LD A+ L    Q+ GL  + IT+  LI+G + + ++  A   + +M  +G+  + V 
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVM 365

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN L+N LCK G   +AR+L+  M + G+ PD +TYTTL+  + K    E  +E+   M 
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 631 LSGVSPDNQTYNAIIS 646
             GV  DN  + A+IS
Sbjct: 426 EEGVVLDNVAFTALIS 441



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 47/99 (47%)

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           +  +SE+   G       YNILIN  CK G  + A+ +   +   G+ P  V++ TL+  
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             K+ + +E   L   M  + + PD  TY+ +I  L  E
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKE 306


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 256/539 (47%), Gaps = 48/539 (8%)

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           +C+++      +  I KL   G    +  +N  L  L   + +     L+ +M       
Sbjct: 126 SCSKLPFALSTFGKITKL---GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV TF  ++  LC+E ++ EA++L  RM++ G+ P  + +  I++  C++GD   AL L 
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242

Query: 275 RKM---------------------------------GVMSGDSVLPNSVTHNCIINGFCK 301
           RKM                                   M    + P+  T+N +I GFC 
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   AE++   M++  I  +V TY  LI+ + + G   EA  L DEM+ RG++PN + 
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y+S I     +  ++ A  +   M  K   P+  T++ L  G C    +    +L +++ 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +V D  +YN LI+      +L AA  LL  MI  GL PDI+T  TL+DG C  G ++
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 482 GAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
            A+++++ M+K +K           +P++  YN +I+GL  +     A+ L +     G+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D ITY+++I+G     ++ EA  MF  M +   + N V +  LIN  CK G      E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L   M   GI+ + +TY TL+  F K  +    +++  +M+ SGV PD  T   +++ L
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 271/536 (50%), Gaps = 24/536 (4%)

Query: 132 LEGLLDSYEI------CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           ++GL D+ ++       +  P+V D   L+    ++   +    + QK++ K     I++
Sbjct: 57  IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +   +      +++      + ++   G   +V TFN +++ LC E ++ EAL+L+++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++   PNVV F  ++N  C+ G +  A+ L  +   M  D + P  +T+  I++G CK+G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR---MMEDGLQPTQITYGTIVDGMCKIG 233

Query: 304 RVEFAEEIRYAMIK-AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
               A ++   M + + I  NV  Y+ +ID   + G   +A  L  EM ++G+ P+   Y
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS I    + G    A  +L +M+++ I PD  TY+ L     + G   +A +L++++L 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +  +Y+ +I+  CK N L AA+ +   M  +G  P++IT+ TLIDGYC    I+ 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
            +++   M +     +   YN++I+G      L+AA  LLQ     GL  D +T +TL++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 542 GYFINGKIAEAFAMFSEMRNV-----------GIAVNKVGYNILINFLCKFGCYQQAREL 590
           G   NGK+ +A  MF  M+             G+  +   YNILI+ L   G + +A EL
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + M   GI+PD +TY++++    K    +E  ++ D M     SP+  T+  +I+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 185/385 (48%), Gaps = 5/385 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  LE A+ LF  M        LP+ V    ++    ++ R +    +   M +  I C
Sbjct: 56  EIKGLEDAIDLFSDM---LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ ++  LI  +        AL    ++ K GL P+ V +N+ +H L  E  V  AL + 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +    P+  T++ L  GLCR G + +A  L ++++E+ +     +Y  +++ +CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 443 NNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +A  LL  M  +  +IP+++ Y  +ID  CK G    A  ++  M++    P+L  
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS+I G C       A+ LLQ   +R    D +TYN LIN +   GK  EA  ++ EM 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N + Y+ +I+  CK      A  +  +M   G  P+ +T+ TL+  +      +
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + +EL  +M  +G+  D  TYN +I
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLI 437



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++++      G    A  ++Q++  +  S  +  +N  ++  VK  +     +LY EM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G + N  T++ +I   CK+ +L+ A  ++Y M   G  PN++ FN +I+  C    +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  ++L  +M   +   ++ ++ T+N +I+GF  +G +  A ++   MI +G+  ++ T 
Sbjct: 412 DDGMELLHEM---TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVE 376
            TL+DG    G  ++AL +   M K            G+ P+   YN  I  L  EG   
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +  +M  + I PD  TYS +  GLC+   + +A ++ + +  +    +  ++  LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N  CK+  +    +L   M  RG++ + ITY TLI G+ K GNI GA+ +++ M      
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           P+ +   +++ GL     L  A ++L+  Q
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 2/279 (0%)

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A+ + SDM+     P    +  L   + R         L+ ++  + +  D YS+ I
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI   C  + L  A      +   GL PD++T+ TL+ G C    +  A+ ++  M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAF 553
            +PN+V + +++NGLC++  +  A +LL      GL    ITY T+++G    G    A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 554 AMFSEMRNVG-IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            +  +M  +  I  N V Y+ +I+ LCK G +  A+ L   M   GI PD  TY +++  
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           F  +    +  +L  +M+   +SPD  TYNA+I+  + E
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 244/468 (52%), Gaps = 6/468 (1%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           I ++N  ++ L K   + +   L  EM       N  T+ +++  LCKE ++EEA+ L  
Sbjct: 10  IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M + G+  +VV ++ +I+  C  G L+    LF +M       + PN V ++C+INGFC
Sbjct: 70  EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEM---LEKGISPNVVVYSCLINGFC 126

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G    A  + + M + GI  +V TY  +I G  + G + +AL L D M ++G  P+ V
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN  I+ L  EG +  A  +   M++K    +  +Y+ L  GLC NG + +A KL + +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 421 LEE--HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           LE+  ++  D  ++N +I  LCK   L  A ++  +MI RG   ++ T   LI  Y K G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYN 537
            I+ A+++++ + K+   P+   Y+ +I+G CK   L+ AK L    +  GL   +  YN
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TL+        + +A  +F EM+      + + +NI+I+   K G    A+EL+  M   
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQM 426

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           G+ PD  TY++ + R SK    EE     D M+ SG++PDN  Y+++I
Sbjct: 427 GLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLI 474



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 229/437 (52%), Gaps = 6/437 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           ++ ++N +I  LCKE +LE+A+ L   M  S   PN   + ++++  C+ G +E A++L 
Sbjct: 9   DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL- 67

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
             +G M    +  + V ++ +I+GFC  G ++  + +   M++ GI  NV  Y+ LI+G+
Sbjct: 68  --LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G   EA  +   M +RG+ P+   Y   I  L  +G    AL +   M +K   P  
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY++L  GLC+ GC+  AFK+   +LE+    +  SYN LI  LC +  L  A +L SS
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245

Query: 455 MIVRG--LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           ++  G  + PD+IT+ T+I G CK G ++ AV++Y+ M +     NL   + +I    K 
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +D A  L +   ++GL+  + TY+ +I+G+     +  A  +FS M+  G++     Y
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDY 365

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N L+  LCK    +QAR L + M      PD +++  ++    K        EL +DM  
Sbjct: 366 NTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ 425

Query: 632 SGVSPDNQTYNAIISPL 648
            G++PD  TY++ I+ L
Sbjct: 426 MGLTPDAYTYSSFINRL 442



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 218/413 (52%), Gaps = 10/413 (2%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M +  I P++V +N IIN  C+   LE A+ L  +M    G S  PNS T+  +++G CK
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEM---EGSSCEPNSFTYCILMDGLCK 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GRVE A  +   M + G++ +V  Y+TLI G+   G  +    L DEM+++G+ PN VV
Sbjct: 58  EGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVV 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y+  I+    +G    A  VL  M ++ I PD +TY+ +  GLC++G  ++A  L + + 
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E+       +YN+LIN LCK   +  A ++  +M+ +G   ++++Y TLI G C  G ++
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLD 237

Query: 482 GAVQVY----ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITY 536
            A++++    E+   VE  P+++ +N++I GLCK+  LD A  +     +R    +  T 
Sbjct: 238 EAMKLFSSLLEDGNYVE--PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTC 295

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + LI  Y  +G I +A  ++  +  +G+  +   Y+++I+  CK      A+ L   M +
Sbjct: 296 HILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKI 355

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            G+ P    Y TL+    K  S E+   L  +M  S   PD  ++N +I   L
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 245/510 (48%), Gaps = 41/510 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+    + G  E A  ++ ++K KG  V +  ++  +S       + R  
Sbjct: 41  CEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK 100

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM+  G   NV  ++ +I   CK+    EA ++ + M + GI P+V  +  +I   
Sbjct: 101 ALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGL 160

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G    AL LF    +M+     P++VT+N +ING CK G +  A +I   M++ G  
Sbjct: 161 CKDGRARKALDLFD---LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKR 217

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGAL 379
             V +Y TLI G    G  +EA++L   +++ G  + P+ + +N+ I  L  EG ++ A+
Sbjct: 218 LEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAV 277

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   MI++    + FT  IL     ++G + +A +L  +V +  +V  + +Y+++I+  
Sbjct: 278 EIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGF 337

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK + L  AK L S M + GL P +  Y TL+   CK  ++E A ++++ MK+   +P+ 
Sbjct: 338 CKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDT 397

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + +N +I+G  K   + +AK LL   Q++GL  DA TY++ IN     G++ EA   F  
Sbjct: 398 ISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDS 457

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
                                              MI  GI PD   Y +L+  F  N  
Sbjct: 458 -----------------------------------MIASGITPDNHVYDSLIKGFGLNDE 482

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            EEVI L   M   GV  D +  N+I++ L
Sbjct: 483 IEEVINLLRQMADMGVILDLEITNSILTFL 512



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 192/375 (51%), Gaps = 3/375 (0%)

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           ++LP+ V++N IING CK  R+E A ++   M  +  + N  TY  L+DG  + G  EEA
Sbjct: 5   NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           +RL  EM ++GL  + VVY++ I    ++G ++    +  +M++K I P+   YS L  G
Sbjct: 65  MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            C+ G  ++A  + + + E  +  D Y+Y  +I  LCK      A  L   M  +G  P 
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
            +TY  LI+G CK G I  A +++E M +  K+  +V YN++I GLC +  LD A  L  
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFS 244

Query: 524 ASQRIG---LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +    G     D IT+NT+I G    G++ +A  ++  M   G   N    +ILI    K
Sbjct: 245 SLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIK 304

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A EL K +   G++P   TY+ ++  F K         L   M +SG+SP    
Sbjct: 305 SGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFD 364

Query: 641 YNAIISPLLGEKSAE 655
           YN +++ L  E S E
Sbjct: 365 YNTLMASLCKESSLE 379



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 215/509 (42%), Gaps = 61/509 (11%)

Query: 60  NSLVNRVVSEFR--KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLM 117
           N+++N +  E R  K+  L +E      E N F++     C ++  L    R ++A+ L+
Sbjct: 14  NTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTY-----CILMDGLCKEGRVEEAMRLL 68

Query: 118 GNLMSAN----------------SVSPLEFLEGLLDSYEICKATP--AVFDALVRACTQI 159
           G +                    S   L+  + L D       +P   V+  L+    + 
Sbjct: 69  GEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKK 128

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A  V+  +  +G    ++ +   +  L K     +   L+  M   G   +  T+
Sbjct: 129 GLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTY 188

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I  LCKE  + +A  ++  ML+ G    VV +N +I   C  G L+ A+KLF  + +
Sbjct: 189 NVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL-L 247

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG-----IDCNV---------- 324
             G+ V P+ +T N +I G CK GR++ A EI   MI+ G       C++          
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 325 --------------------RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
                                TY+ +IDG+ +      A  L   M   GL P    YN+
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            +  L  E  +E A  +  +M + +  PD  +++I+  G  + G +  A +L N + +  
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  DAY+Y+  IN L K   +  AK    SMI  G+ PD   Y +LI G+     IE  +
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVI 487

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            +   M  +    +L I NSI+  LC  A
Sbjct: 488 NLLRQMADMGVILDLEITNSILTFLCNSA 516



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 162/347 (46%), Gaps = 40/347 (11%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + +   ++ L+    + G    A+ + + +  KG  + + ++N  +  L    ++    K
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 203 LYKEMVSCG-YVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           L+  ++  G YVE +V TFN VI  LCKE +L++A+ +Y  M++ G + N+   +++I E
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G ++ A++L++++  +    ++P+S T++ +I+GFCK+  + FA+ +   M  +G+
Sbjct: 302 YIKSGIIDKAMELWKRVHKLG---LVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGL 358

Query: 321 DCNVRTYATL-----------------------------------IDGYARGGSSEEALR 345
              +  Y TL                                   IDG  + G    A  
Sbjct: 359 SPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKE 418

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L ++M + GL P+   Y+S I+ L   G +E A      MI   I PD+  Y  L KG  
Sbjct: 419 LLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFG 478

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
            N  +++   L  Q+ +  ++ D    N ++ +LC S       +LL
Sbjct: 479 LNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525


>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 271/546 (49%), Gaps = 14/546 (2%)

Query: 32  EDIVFRAICVNLRQRKWK-ILEQMAPS--LTNSLVNRVVSEFR-----KSPKLALEFYTW 83
           E ++ ++IC  + +  WK IL+    S  L +S++ +V+SE         P L+  FY+W
Sbjct: 10  EALIAQSICATVLKGNWKNILKHKVDSGLLKSSIITQVISELSLYSGYGGPSLSWSFYSW 69

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EIC 142
                   HSL+SS  ++ +L     F  A  L+  L     +S    L  L+    E  
Sbjct: 70  TDSLPSCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQRELLSSPLVLRSLVGGVSEDP 129

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +    VF  L+    + G    +  V +++   G    + A    L+ LVK       WK
Sbjct: 130 EVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWK 189

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++K+MV  G V N++ +N++++A  K    E+A  L   M + G++P++  +N +I+  C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +      AL +  +M       V P+ VT+N +I+GF + GR+  A  + +  IK  +  
Sbjct: 250 KKSMHFEALSVQDRM---ERSGVAPDIVTYNSLIHGFSREGRMREATRL-FRKIKGVVMA 305

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY TLIDGY R    +EALRL + M  RG  P  V YNS +  L  +G +  A  +L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLL 365

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M  K I PD+ T + L    C+   +  A K+  +++E  +  D YSY  LI+  CK 
Sbjct: 366 TEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  AK+ L SMI +GL P    Y  L+DG+      +   ++ E  +K    P++ +Y
Sbjct: 426 LELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALY 485

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +I  +CK   +D AK L ++ ++ GL+ D++ Y T+   Y+  GK+ +A A+F  M N
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASALFDVMYN 545

Query: 562 VGIAVN 567
             + VN
Sbjct: 546 RRLMVN 551



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 184/372 (49%), Gaps = 6/372 (1%)

Query: 278 GVMSGDSVLPNSVTH--NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            ++ G S  P  ++H  + ++  + K G +  +  +   ++  G+  +++    L++   
Sbjct: 120 SLVGGVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLV 179

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           +   ++   ++  +MVK G++ N  VYN  +H     GD E A  +LS+M +K + PD F
Sbjct: 180 KERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIF 239

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY+ L    C+     +A  + +++    +  D  +YN LI+   +   +  A +L    
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRK- 298

Query: 456 IVRGLI-PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
            ++G++  + +TY TLIDGYC+  +I+ A+++ E M+     P +V YNSI+  LC+D  
Sbjct: 299 -IKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGR 357

Query: 515 LDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  A  LL + S +    D IT NTLIN Y     +  A  +  +M   G+ ++   Y  
Sbjct: 358 IREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKA 417

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK      A+E +  MI  G+ P Y  Y+ LV  F      +E+ +L ++    G
Sbjct: 418 LIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRG 477

Query: 634 VSPDNQTYNAII 645
           + PD   Y  +I
Sbjct: 478 LCPDVALYRGLI 489



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 158/331 (47%), Gaps = 2/331 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           ++ L+  YA+ G   +++ + ++++  GL P+       ++ L  E   +    +   M+
Sbjct: 136 FSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWKIFKKMV 195

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +  +   Y++L     ++G  ++A KL +++ E+ +  D ++YN LI+  CK +   
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +   M   G+ PDI+TY +LI G+ + G +  A +++  +K V    N V Y ++I
Sbjct: 256 EALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGV-VMANHVTYTTLI 314

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G C+   +D A  L +  +  G    + TYN+++     +G+I EA  + +EM    I 
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIE 374

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + +  N LIN  CK      A ++ K MI  G+  D  +Y  L+  F K    +   E 
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEE 434

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              M+  G+SP    Y+ ++     +   ++
Sbjct: 435 LFSMIEKGLSPGYSAYSWLVDGFYNQNKQDE 465



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 169/390 (43%), Gaps = 68/390 (17%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ LV AC++ G +E A  ++ +++ KG    I  +N  +S   K +       +   M
Sbjct: 205 VYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   ++ T+N +I+   +E ++ EA  L+ R +K  +  N V +  +I+  C++ D+
Sbjct: 265 ERSGVAPDIVTYNSLIHGFSREGRMREATRLF-RKIKGVVMANHVTYTTLIDGYCRMNDI 323

Query: 268 EFALKLFRKM-------GVMSGDSVL-------------------------PNSVTHNCI 295
           + AL+L   M       GV++ +S+L                         P+++T N +
Sbjct: 324 DEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTL 383

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           IN +CK+  +  A +++  MI++G+  ++ +Y  LI G+ +    + A      M+++GL
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGL 443

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P    Y+  +   + +           D I K   P+ F      +GLC          
Sbjct: 444 SPGYSAYSWLVDGFYNQNK--------QDEITK--LPEEFE----KRGLC---------- 479

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
                       D   Y  LI  +CK   +  AK L  SM  +GL+ D + Y T+   Y 
Sbjct: 480 -----------PDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYW 528

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           + G +  A  +++ M       NL +Y S+
Sbjct: 529 RTGKVTDASALFDVMYNRRLMVNLKLYKSL 558



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/319 (22%), Positives = 142/319 (44%), Gaps = 43/319 (13%)

Query: 137 DSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH-AWNNFLSHLVK 193
           D  E     P +  +++L+   ++ G    A  + +K  +KG  ++ H  +   +    +
Sbjct: 262 DRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRK--IKGVVMANHVTYTTLIDGYCR 319

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           +N+I    +L + M S G+   V T+N ++  LC++ ++ EA  L   M    I P+ + 
Sbjct: 320 MNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNIT 379

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N +IN  C++ D+  A+K+ +KM + SG  +  +  ++  +I+GFCK+  ++ A+E  +
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKM-IESGLKL--DMYSYKALIHGFCKVLELDNAKEELF 436

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP---------------- 357
           +MI+ G+      Y+ L+DG+      +E  +L +E  KRGL P                
Sbjct: 437 SMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLE 496

Query: 358 -------------------NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
                              ++V+Y +  +  +  G V  A  +   M ++ +  +   Y 
Sbjct: 497 QVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASALFDVMYNRRLMVNLKLYK 556

Query: 399 ILTKGLCRNGCVKQAFKLH 417
            L+     +  V + F  H
Sbjct: 557 SLSASYAGDNDVLRFFWSH 575



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 16/171 (9%)

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT 535
           K  + + A Q+ + + + E   + ++  S++ G+ +D  + +                  
Sbjct: 92  KHNHFKTAHQLLDKLSQRELLSSPLVLRSLVGGVSEDPEVLSH----------------V 135

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           ++ L+  Y  +G I ++ A+F ++ + G+  +     +L+N L K        ++ K M+
Sbjct: 136 FSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDTVWKIFKKMV 195

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             G++ +   Y  LV   SK+   E+  +L  +M   GV PD  TYN +IS
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLIS 246


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 244/445 (54%), Gaps = 14/445 (3%)

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           SC + +NV ++N ++  LCK+ KL EA  L   M  +G+ PN   FN++++  C++G L+
Sbjct: 242 SC-FPDNV-SYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A ++   + +M+ ++VLP+  T+N +I G CK G+++ A  ++  M    +  +V TY 
Sbjct: 300 EAAQV---IDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYN 356

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI+G     SS +   L D+M  +G+ PN V YN  + W   EG ++ A   L  M + 
Sbjct: 357 TLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES 416

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  T++ L  G C+ G + +AF++ +++  + +  ++ + N +++ LC    L  A
Sbjct: 417 GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDA 476

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +LLSS   RG   D ++YGTLI GY K G    A+++++ MK+ E  P+++ YN++I G
Sbjct: 477 YKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGG 536

Query: 509 LC----KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           LC     D S+D    LL++    GL+ D  TYNT+I GY   G++ +AF   ++M    
Sbjct: 537 LCHSGKTDQSIDKLNELLES----GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
              +    NIL+  LC  G   +A +L    I  G   D VTY T+++   K    EE  
Sbjct: 593 FKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAF 652

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
           +L  +M    + PD  TYNAI+S L
Sbjct: 653 DLLAEMEEKKLGPDCYTYNAILSAL 677



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 232/455 (50%), Gaps = 4/455 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ ++    + G    A D++  +K  G   + + +N  +S   KL  +    ++   M 
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
               + +V T+N++I  LCK+ K++EA  L   M    + P+VV +N +IN  C   D  
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLIN-GC--FDCS 366

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            +LK F  +  M G  V PN+VT+N ++  + K G+++ A      M ++G   +  T+ 
Sbjct: 367 SSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFN 426

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI+GY + G   EA R+ DEM ++GL  N+V  N+ +H L  E  ++ A  +LS    +
Sbjct: 427 TLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKR 486

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  +Y  L  G  ++G   +A KL +++ E+ ++    +YN +I  LC S     +
Sbjct: 487 GYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQS 546

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
              L+ ++  GL+PD  TY T+I GYC+ G +E A Q +  M K   KP+L   N ++ G
Sbjct: 547 IDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRG 606

Query: 509 LCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC +  LD A  L       G  +DA+TYNT+I+G     +  EAF + +EM    +  +
Sbjct: 607 LCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPD 666

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              YN +++ L   G  ++A E M  ++  G + D
Sbjct: 667 CYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQD 701



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 215/416 (51%), Gaps = 4/416 (0%)

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           +++  ++K G+  N   FN++I   C    L  A+ L   +G M   S  P++V++N I+
Sbjct: 198 AIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGL---IGKMKDFSCFPDNVSYNTIL 254

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +  CK G++  A ++   M   G+  N  T+  L+ GY + G  +EA ++ D M +  ++
Sbjct: 255 DVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVL 314

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+   YN  I  L  +G ++ A  +  +M +  + PD  TY+ L  G        + F+L
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFEL 374

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +++  + +  +A +YN+++ +  K   +  A   L  M   G  PD +T+ TLI+GYCK
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAIT 535
            G +  A ++ + M +   K N V  N+I++ LC +  LD A  LL  AS+R   +D ++
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y TLI GYF +GK  EA  ++ EM+   I  + + YN +I  LC  G   Q+ + +  ++
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL 554

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             G++PD  TY T++  + +    E+  + H+ MV     PD  T N ++  L  E
Sbjct: 555 ESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTE 610



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 202/404 (50%), Gaps = 27/404 (6%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++L  +M   G   N  T+N+V+    KE K++ A +   +M +SG  P+ V FN +IN 
Sbjct: 372 FELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLING 431

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G L  A   FR M  MS   +  NSVT N I++  C   +++ A ++  +  K G 
Sbjct: 432 YCKAGRLSEA---FRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 488

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  +Y TLI GY + G S EA++L DEM ++ ++P+ + YN+ I  L   G  + ++ 
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSID 548

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
            L+++++  + PD  TY+ +  G CR G V++AF+ HN+++++    D ++ NIL+  LC
Sbjct: 549 KLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLC 608

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
               L  A +L ++ I +G   D +TY T+I G CK    E A  +   M++ +  P+  
Sbjct: 609 TEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCY 668

Query: 501 IYNSIINGLCKDASLDAAKSLLQ--------ASQRIGL----------------LDAITY 536
            YN+I++ L     +  A+  +           Q I L                 +++T+
Sbjct: 669 TYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTF 728

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +  IN     GK  +A  M  E    GI ++K  Y  L+  L K
Sbjct: 729 SEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 163/332 (49%), Gaps = 4/332 (1%)

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF---AEGDVEGALFVLSDM 385
           T I  Y        A ++ + M +  L PN +  N+ I+ L    ++  V  +  + SD+
Sbjct: 144 TSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDV 203

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I   +  +  T++IL  G C    + +A  L  ++ +     D  SYN +++ LCK   L
Sbjct: 204 IKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKL 263

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A+ LL  M   GL+P+  T+  L+ GYCK G ++ A QV + M +    P++  YN +
Sbjct: 264 NEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNML 323

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I GLCKD  +D A  L    + + LL D +TYNTLING F      + F +  +M   G+
Sbjct: 324 IGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGV 383

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N V YN+++ +  K G    A   ++ M   G  PD VT+ TL+  + K     E   
Sbjct: 384 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFR 443

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + D+M   G+  ++ T N I+  L GE+  +D
Sbjct: 444 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 475



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 159/368 (43%), Gaps = 46/368 (12%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSC--AIVHLLVNWRRFDDALLLMGNLM 121
           N +++ + K+ +L+ E +  + E +R    + S     I+H L   R+ DDA  L+    
Sbjct: 426 NTLINGYCKAGRLS-EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLL---- 480

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
             +S S   +                 +  L+    + G +  A  +  ++K K    SI
Sbjct: 481 --SSASKRGYF-----------VDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSI 527

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             +N  +  L    +  +      E++  G V +  T+N +I   C+E ++E+A   + +
Sbjct: 528 ITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNK 587

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M+K    P++   N+++   C  G L+ ALKLF    +  G ++  ++VT+N II+G CK
Sbjct: 588 MVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTW-ISKGKAI--DAVTYNTIISGLCK 644

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM----- 356
             R E A ++   M +  +  +  TY  ++   A  G  +EA      +V++G +     
Sbjct: 645 EDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTI 704

Query: 357 ------------------PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
                             PN+V ++  I+ L  +G  + A+ ++ +   K I     TY 
Sbjct: 705 SLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYI 764

Query: 399 ILTKGLCR 406
            L +GL +
Sbjct: 765 SLMEGLIK 772


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/577 (27%), Positives = 267/577 (46%), Gaps = 42/577 (7%)

Query: 75  KLALEFYTWV--GENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           +LAL+F  WV    N   +H     C   H+LV  R ++ A   + +L+    +      
Sbjct: 33  RLALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQL-PIGLNSVF 91

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             L+++Y IC + PAVFD L+R C +        D +Q   + G                
Sbjct: 92  GALMETYPICNSNPAVFDLLIRVCLR---NRMVGDAVQTFYLMGFR-------------- 134

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                             G   +V T N+V+ +L KE K++   S +  ML  GI P+V 
Sbjct: 135 ------------------GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVA 176

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            FN+++N  C+ G  + A  L RKM       V P +VT+N ++N +CK GR + A ++ 
Sbjct: 177 TFNILLNALCERGKFKNAGFLLRKM---EESGVYPTAVTYNTLLNWYCKKGRYKAASQLI 233

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M   GI  +V TY   ID   R   S +   L   M +  + PN + YN+ I     E
Sbjct: 234 DCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVRE 293

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G +E A  V  +M   ++ P+  TY+ L  G C  G + +A +L + ++   +  +  +Y
Sbjct: 294 GKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTY 353

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             L+N L K+        +L  M + G+    I+Y  +IDG CK G +E AVQ+ ++M K
Sbjct: 354 GALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLK 413

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
           V   P++V ++ +ING  +   ++ AK ++    + GL+ + I Y+TLI  Y   G + E
Sbjct: 414 VSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKE 473

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A   ++ M + G   +    N+L+   C++G  ++A   M  M   G+ P+ VT+  ++ 
Sbjct: 474 ALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIIN 533

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +  +    +   + D M   G  P   TY  ++  L
Sbjct: 534 GYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 231/503 (45%), Gaps = 5/503 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++ L+    + G  + A  +I  +  KG  V +  +N F+ +L + +   + + L 
Sbjct: 209 TAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLL 268

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           K M       N  T+N +I    +E K+E A  ++  M    + PN + +N +I   C  
Sbjct: 269 KRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTT 328

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G++  AL+L   M VM    + PN VT+  ++NG  K         I   M   G+  + 
Sbjct: 329 GNIGEALRL---MDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSH 385

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            +Y  +IDG  + G  EEA++L D+M+K  + P+ V ++  I+  F  G +  A  ++  
Sbjct: 386 ISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCK 445

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M    + P+   YS L    C+ G +K+A   +  +     V D ++ N+L+   C+   
Sbjct: 446 MYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGK 505

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A+  ++ M   GL P+ +T+  +I+GY   G+   A  V++ M      P+L  Y  
Sbjct: 506 LEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGG 565

Query: 505 IINGLCKDASLDAAKSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           ++ GLC    ++ A       + I   +D + +NT +     +G +++A A+ +EM    
Sbjct: 566 LLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTND 625

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII-PDYVTYTTLVTRFSKNCSPEEV 622
              +   Y  LI  LCK G    A  L    I  G++ P+   YT+LV    K+      
Sbjct: 626 FLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAA 685

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
           + + ++M+   V PD   +N II
Sbjct: 686 LYIFEEMLNKDVEPDTVAFNVII 708



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 245/530 (46%), Gaps = 11/530 (2%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD        P V  F  L+    ++G    A +++ K+   G   +   ++  + +  
Sbjct: 407 LLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYC 466

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K+  +      Y  M   G+V +  T N+++   C+  KLEEA      M + G+ PN V
Sbjct: 467 KMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSV 526

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI- 311
            F+ IIN     GD   ALK F     M+     P+  T+  ++ G C  G +  A +  
Sbjct: 527 TFDCIINGYGNSGD---ALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFF 583

Query: 312 -RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
            R   I   +D NV  + T +    R G+  +A+ L +EMV    +P+N  Y + I  L 
Sbjct: 584 HRLRCIPNAVD-NV-IFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLC 641

Query: 371 AEGDVEGALFVLSDMIDKHI-CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
            +G +  AL +    I+K +  P+   Y+ L  GL ++G  + A  +  ++L + +  D 
Sbjct: 642 KKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDT 701

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++N++I+   +    +    +LS+M  + L  ++ TY  L+ GY K   +     +Y++
Sbjct: 702 VAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKD 761

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGK 548
           M +    P+   ++S+I G C+  S D A  +L+     G ++D  T+N LI  +    +
Sbjct: 762 MIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNE 821

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +AF +  +M    +  N   YN L N L +   + +A  +++V++  G +P    Y T
Sbjct: 822 MKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYIT 881

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           L+    +  + +  ++L D+M   G+S  N   +AI+  L   K  E+ +
Sbjct: 882 LINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAI 931



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 221/460 (48%), Gaps = 11/460 (2%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV---CFNMI 257
           + ++ +M S G+  ++ T+  ++  LC    + EAL  ++R+      PN V    FN  
Sbjct: 545 FSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRL---RCIPNAVDNVIFNTK 601

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           +   C+ G+L  A+ L  +M     +  LP++ T+  +I G CK G++  A  +    I+
Sbjct: 602 LTSTCRSGNLSDAIALINEM---VTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIE 658

Query: 318 AGI-DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
            G+   N   Y +L+DG  + G +  AL + +EM+ + + P+ V +N  I     +G   
Sbjct: 659 KGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTS 718

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
               +LS M  K++C +  TY+IL  G  +   + + F L+  ++    + D +S++ LI
Sbjct: 719 KVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLI 778

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
              C+S +   A ++L  + + G + D  T+  LI  +C+   ++ A ++ + M +    
Sbjct: 779 LGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVI 838

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
           PN+  YN++ NGL + +    A  +LQ     G +     Y TLING    G I  A  +
Sbjct: 839 PNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKL 898

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             EM+ +GI+ + V  + ++  L      + A  ++ +M+   IIP   T+TTL+  + K
Sbjct: 899 QDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCK 958

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             +  + +EL   M    V  D   YN +IS L      E
Sbjct: 959 EANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIE 998



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 228/472 (48%), Gaps = 7/472 (1%)

Query: 146  PAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            P++F    L++     G    A     +L+   ++V    +N  L+   +   +     L
Sbjct: 558  PSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIAL 617

Query: 204  YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEAC 262
              EMV+  ++ +  T+  +I  LCK+ K+  AL L  + ++ G+  PN   +  +++   
Sbjct: 618  INEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLL 677

Query: 263  QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            + G    AL +F +M       V P++V  N II+ + + G+     +I   M    +  
Sbjct: 678  KHGHARAALYIFEEM---LNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCF 734

Query: 323  NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            N+ TY  L+ GYA+  +      L  +M++ G +P+   ++S I         + A+ +L
Sbjct: 735  NLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKIL 794

Query: 383  SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
              +  +    D FT+++L    C    +K+AF+L  Q+ +  ++ +  +YN L N L ++
Sbjct: 795  RWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRT 854

Query: 443  NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++   A ++L  ++  G +P    Y TLI+G C+ GNI+GA+++ + MK +    + V  
Sbjct: 855  SDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAM 914

Query: 503  NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+ GL     ++ A  +L     + ++  + T+ TL++ Y     +A+A  + S M +
Sbjct: 915  SAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEH 974

Query: 562  VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
              + ++ V YN+LI+ LC  G  + A +L + M    + P+   Y  L+  F
Sbjct: 975  CHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 180/363 (49%), Gaps = 5/363 (1%)

Query: 115  LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
            L+ G L   ++ + L   E +L+  +  +     F+ ++   ++ G T    D++  +K 
Sbjct: 672  LVDGLLKHGHARAALYIFEEMLN--KDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKS 729

Query: 175  KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            K    ++  +N  L    K + + R + LYK+M+  G++ +  +++ +I   C+    + 
Sbjct: 730  KNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDV 789

Query: 235  ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            A+ +   +   G   +   FNM+I + C+  +++ A +L ++M       V+PN  T+N 
Sbjct: 790  AIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFM---VIPNVDTYNA 846

Query: 295  IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            + NG  +      A  +   ++++G     + Y TLI+G  R G+ + A++L DEM   G
Sbjct: 847  LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 355  LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
            +  +NV  ++ +  L     +E A++VL  M++  I P   T++ L    C+   V +A 
Sbjct: 907  ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 415  KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +L + +   H+  D  +YN+LI+ LC + ++ AA +L   M  R L P+   Y  LID +
Sbjct: 967  ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026

Query: 475  CKG 477
            C G
Sbjct: 1027 CAG 1029



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 188/414 (45%), Gaps = 19/414 (4%)

Query: 113  ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
            ALLL G  +    +SP                 PAV+ +LV    + G    A  + +++
Sbjct: 649  ALLLSGKAIEKGLLSP----------------NPAVYTSLVDGLLKHGHARAALYIFEEM 692

Query: 173  KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
              K       A+N  +    +  +  +   +   M S     N+ T+N++++   K   +
Sbjct: 693  LNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAM 752

Query: 233  EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
                 LY  M++ G  P+   ++ +I   CQ    + A+K+ R +  + G  +  +  T 
Sbjct: 753  ARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWI-TLEGHVI--DRFTF 809

Query: 293  NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
            N +I  FC+   ++ A E+   M +  +  NV TY  L +G  R     +A R+   +++
Sbjct: 810  NMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLE 869

Query: 353  RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
             G +P N  Y + I+ +   G+++GA+ +  +M    I   +   S + +GL  +  ++ 
Sbjct: 870  SGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIEN 929

Query: 413  AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
            A  + + +LE  ++    ++  L++  CK  N+A A +L S M    +  D++ Y  LI 
Sbjct: 930  AIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLIS 989

Query: 473  GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
            G C  G+IE A ++YE MK+ +  PN  IY  +I+  C       ++ LL+  Q
Sbjct: 990  GLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQ 1043



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 1/268 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P  +T +++   L +   V   +     +L + +  D  ++NIL+N LC+      A  L
Sbjct: 138 PSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFL 197

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M   G+ P  +TY TL++ YCK G  + A Q+ + M       ++  YN  I+ LC+
Sbjct: 198 LRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCR 257

Query: 512 DASLDAAKSLLQASQR-IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           D+       LL+  +R +   + ITYNTLI+G+   GKI  A  +F EM    +  N + 
Sbjct: 258 DSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSIT 317

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN LI   C  G   +A  LM VM+ HG+ P+ VTY  L+    KN     V  + + M 
Sbjct: 318 YNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMR 377

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + GV   + +Y A+I  L      E+ V
Sbjct: 378 MGGVRVSHISYTAMIDGLCKNGMLEEAV 405



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 7/213 (3%)

Query: 147  AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            A+F+ L+R          A+ V+Q L   G   +   +   ++ + ++  I    KL  E
Sbjct: 846  ALFNGLIRT----SDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901

Query: 207  MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            M + G   +    + ++  L    K+E A+ +   ML+  I P V  F  +++  C+  +
Sbjct: 902  MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +  AL+L     +M    V  + V +N +I+G C  G +E A ++   M +  +  N   
Sbjct: 962  VAKALEL---RSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSI 1018

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            Y  LID +  G    E+ +L  ++  R LM  N
Sbjct: 1019 YIVLIDSFCAGNYQIESEKLLRDIQDRELMRLN 1051


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 257/536 (47%), Gaps = 44/536 (8%)

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEI 141
           W+     F H+ +S CA+ + L   + F +   ++  L+S     S       +LD+   
Sbjct: 90  WLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            + +  VFDAL+ A    G    A    + ++     +  H     L  ++  N     W
Sbjct: 150 -RCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             Y E++  G+   V  +N++I   CKE  + +A  ++  + K G+ P  V FN +IN  
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+  +L+     FR    M  + + P+  T++ +I+G CK GR++ AE++   M + G+ 
Sbjct: 269 CKSRNLDEG---FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLR 325

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  T+  LIDG  R    + A+    +M+  G+ P+ V+YN+ ++ L   GDV  A  +
Sbjct: 326 PNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKL 385

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           + +M    + PD  TY+ L  G C+ G ++ A ++   + EE +V D  ++  LI+  C+
Sbjct: 386 VDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCR 445

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A++ L  M+  G+ PD  TY  +IDGYCK GN++   ++ + M+    KP ++ 
Sbjct: 446 DGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVIT 505

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN ++NGLCK   +  A  LL+A   +G+  D ITYN L+ G+  NGK            
Sbjct: 506 YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK------------ 553

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
                                     A +L+K+    G+I DY  YT+LV+ ++K+
Sbjct: 554 --------------------------AEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 192/361 (53%), Gaps = 4/361 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P    +N +IN FCK G +  A+ I   + K G+     ++ TLI+G  +  + +E  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M +  + P+   Y+  IH L  EG ++ A  +  +M  + + P+  T++ L  G CR
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +  +  A   ++Q+L   +  D   YN L+N LCK  ++  A++L+  M + G+ PD IT
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDGYCK G++E A+++ + M +     + V + ++I+G C+D  +  A+  L+   
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D  TY  +I+GY   G +   F +  EM+  G     + YN+L+N LCK G  +
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  L++ M+  G+ PD +TY  L+    KN   E++++L ++    G+  D   Y +++
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYTSLV 577

Query: 646 S 646
           S
Sbjct: 578 S 578



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 164/301 (54%), Gaps = 1/301 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G  P    YN  I+    EG +  A  + +++  + + P   +++ L  GLC++ 
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L   + E  +  D ++Y++LI+ LCK   L  A+QL   M  RGL P+ IT+ 
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            LIDG C+   I+ A+  Y  M  +  KP+LV+YN+++NGLCK   ++ A+ L+   + +
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMV 392

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  D ITY TLI+GY   G +  A  +   M   G+ ++ V +  LI+  C+ G  + A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
              ++ M+  G+ PD  TYT ++  + K  + +   +L  +M ++G  P   TYN +++ 
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512

Query: 648 L 648
           L
Sbjct: 513 L 513



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 143/264 (54%), Gaps = 1/264 (0%)

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           S++++    P    Y+IL    C+ G ++ A  + N++ +  +     S+N LIN LCKS
Sbjct: 212 SEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKS 271

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            NL    +L  +M    + PD+ TY  LI G CK G ++ A Q+++ M++   +PN + +
Sbjct: 272 RNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITF 331

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+G C+   +D+A +       +G+  D + YNTL+NG    G + +A  +  EMR 
Sbjct: 332 TALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRM 391

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           VG+  +K+ Y  LI+  CK G  + A E+ K M   G++ D V +T L++ F ++    +
Sbjct: 392 VGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
                 +MV +G+ PD+ TY  +I
Sbjct: 452 AERTLREMVEAGMKPDDATYTMVI 475



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 2/266 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P H    +L K +  N  V   +  ++++LE         YNILIN  CK  ++  AK +
Sbjct: 187 PFHGCGYLLDKMINSNSPV-TIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLI 245

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
            + +  RGL P  +++ TLI+G CK  N++   ++ + M++    P++  Y+ +I+GLCK
Sbjct: 246 FNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  LD A+ L    Q+ GL  + IT+  LI+G   + +I  A   + +M  +G+  + V 
Sbjct: 306 EGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVM 365

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN L+N LCK G   +AR+L+  M + G+ PD +TYTTL+  + K    E  +E+   M 
Sbjct: 366 YNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             GV  DN  + A+IS    +    D
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRD 451


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 272/529 (51%), Gaps = 12/529 (2%)

Query: 130 EFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVK-----GHSVSIH 182
           E ++  L    +   TP VF    L++       ++ A  ++  + V      G+   + 
Sbjct: 144 EAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVV 203

Query: 183 AWNNFLSHLVKLN-EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           ++N  ++ L++   ++   + L+ +M+  G   +V T+N +I AL K   +++A  +  R
Sbjct: 204 SYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVR 263

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M+K+G  PN +  N +++  C  G    A+ +F++M     D V P+  T+N ++   CK
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRM---CRDGVEPDVFTYNTLMGYLCK 320

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A +I  +M+K G   N  TY TL+ GYA  GS  +   L D MV+ G+ P++ +
Sbjct: 321 NGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYI 380

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  I      G V+ A+ + S M  + + PD  TY I+   LC  G V  A     +++
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
            E +  DA  +  LI+ LC  +    A++L   MI RG+ P+ I + TL++  CK G + 
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A  +++ M +V+ + +++ YN++I+G C    +D A  LL+     G+  + +TYNT+I
Sbjct: 501 RAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           NGY  NG+I +AF++F +M + G+    V Y+ ++  L +      A+EL   MI  GI 
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            D  TY  ++    +N   ++ + +  ++ L     +N+T+N +I  LL
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALL 669



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 222/456 (48%), Gaps = 5/456 (1%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFNMIINEACQV 264
            ++  G+     TF+ ++ ALC + +  EA+ +  R +   G  PNV  + +++   C  
Sbjct: 116 RVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDE 175

Query: 265 GDLEFALKLFRKMGVM--SGDSVLPNSVTHNCIINGFCKLGR-VEFAEEIRYAMIKAGID 321
              + AL L   M V   +     P+ V++N +ING  + GR ++ A  +   M+  G+ 
Sbjct: 176 NRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLS 235

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY ++I   ++  + ++A  +   MVK G MPN + +NS +H   + G    A+ V
Sbjct: 236 PDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGV 295

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M    + PD FTY+ L   LC+NG   +A K+ + +++     ++ +Y  L++    
Sbjct: 296 FKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT 355

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             +L     LL  M+  G+ PD   +  LI  Y K G ++ A+ ++  M++    P+ V 
Sbjct: 356 EGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVT 415

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +++ LC    +D A +        GL  DA+ +  LI+G     K  +A  +  EM 
Sbjct: 416 YGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMI 475

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N + +N L+N LCK G   +A+ +  +M+   +  D +TY TL+  +  +   +
Sbjct: 476 GRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVD 535

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           E  +L + MVL GV P+  TYN +I+        ED
Sbjct: 536 EAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIED 571



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 188/413 (45%), Gaps = 42/413 (10%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K   A +  L+      G+    + ++  +   G     + +N  +    K  ++     
Sbjct: 340 KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAML 399

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +M   G   +  T+ +V+ ALC   K+++A++ + R++  G+ P+ V F  +I+  C
Sbjct: 400 LFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLC 459

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                + A +L  +M    G  + PN++  N ++N  CK G V  A+ I   M++  +  
Sbjct: 460 ARDKWDKAEELAVEM---IGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQR 516

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY TLIDGY   G  +EA +L + MV  G+ PN V YN+ I+     G +E A  + 
Sbjct: 517 DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576

Query: 383 SDMIDKHICP-----------------------------------DHFTYSILTKGLCRN 407
             M  K + P                                   D  TY+I+  GLC+N
Sbjct: 577 RQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQN 636

Query: 408 GCVKQAFKLHNQ--VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
            C   A ++     +++ H+  +  ++NI+I+ L K      AK L +S++ RGL+P+++
Sbjct: 637 NCTDDALRIFQNLYLIDFHL--ENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVV 694

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           TY  ++    + G +E    ++ +++K     N  + N+++  L +   +  A
Sbjct: 695 TYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 13/318 (4%)

Query: 350 MVKRGLMPNNVV-YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           MV R  +P N++ Y+  I      G ++ A   L  +I      +  T+S L K LC   
Sbjct: 81  MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKK 140

Query: 409 CVKQAFKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMIVR-----GL 460
              +A  +  + +   ++G   + +SY IL+  LC  N    A  LL +M+V      G 
Sbjct: 141 RTSEAMDIALRRMP--VLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGY 198

Query: 461 IPDIITYGTLIDGYCK-GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD-AA 518
            PD+++Y T+I+G  + G  ++ A  +++ M      P++V YNSII+ L K  ++D AA
Sbjct: 199 PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAA 258

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             L++  +   + + IT+N+L++GY  +GK  +A  +F  M   G+  +   YN L+ +L
Sbjct: 259 VVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYL 318

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G   +AR++   M+  G  P+  TY TL+  ++   S  ++  L D MV +G+ PD+
Sbjct: 319 CKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDH 378

Query: 639 QTYNAIISPLLGEKSAED 656
             +N +I         +D
Sbjct: 379 YIFNILIGTYTKHGKVDD 396


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/446 (32%), Positives = 235/446 (52%), Gaps = 5/446 (1%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ +M+      N+  FN V++ALCK   + EA  L  ++++ G+  N+  +N+ I   
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L  A++L   M   +    +P+ VT+N +I G CK    + A      M+  G  
Sbjct: 235 CEAGRLPEAVRLVDGMRAYA----VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCL 290

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY T+IDGY +    +EA  L  + V +G +P+ V Y S I+ L AEGDVE AL +
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            ++   K I PD   Y+ L KGLC  G +  A ++ N++ EE    D  +YNI+IN LCK
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             N++ A  +++  I++G +PD+ T+ TLIDGYCK   ++ A+Q+ E M +    P+ + 
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS++NGLCK   ++      Q     G   + ITYN LI  +  + K+ EA  +  +M 
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  + V +N LI   C+ G  + A  L + +   G      T+ TL+  FS   +  
Sbjct: 531 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 590

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIIS 646
              ++ D+M+  G   D+ TY  +I 
Sbjct: 591 MAEKIFDEMLSKGHRADSYTYRVLID 616



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 250/545 (45%), Gaps = 40/545 (7%)

Query: 143 KATPAVFDAL----VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           + +PA    L    +RA  + G    A D  +++ +     +  A+N  +  LV      
Sbjct: 46  RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHD 105

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECK--------------------------- 231
           +  K+Y  M++ G   +++T  + + + C   +                           
Sbjct: 106 QAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLY 165

Query: 232 ----LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
                 +A  L+ +ML + ++PN+  FN +++  C+ GD+  A  L  K+ +  G S+  
Sbjct: 166 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKV-IQRGMSI-- 222

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+N  I G C+ GR+  A  +   M    +  +V TY TLI G  +    +EA+   
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYL 281

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             M+ +G +P++  YN+ I        V+ A  +L D + K   PD  TY  L  GLC  
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V++A +L N+   + +  D   YN L+  LC    +  A Q+++ M   G  PDI TY
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             +I+G CK GNI  A  V  +       P++  +N++I+G CK   LD+A  L++    
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  D ITYN+++NG    GK+ E    F EM   G   N + YNILI   C+    ++
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +++  M   G+ PD V++ TL+  F +N   E    L   +   G S    T+N +I 
Sbjct: 522 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 581

Query: 647 PLLGE 651
              G+
Sbjct: 582 AFSGK 586



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 241/492 (48%), Gaps = 5/492 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F+ ++ A  + G    A  ++ K+  +G S+++  +N ++  L +   +    +L   
Sbjct: 190 AAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDG 249

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M +   V +V T+N +I  LCK+   +EA+    RM+  G  P+   +N II+  C++  
Sbjct: 250 MRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 308

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A +L +   V  G   +P+ VT+  +ING C  G VE A E+       GI  ++  
Sbjct: 309 VQEATELLKD-AVFKG--FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 365

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +L+ G    G    AL++ +EM + G  P+   YN  I+ L   G++  A  V++D I
Sbjct: 366 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 425

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K   PD FT++ L  G C+   +  A +L  ++ E  +  D  +YN ++N LCK+  + 
Sbjct: 426 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 485

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              +    MI++G  P+ ITY  LI+ +C+   +E A +V   M +    P+ V +N++I
Sbjct: 486 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 545

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            G C++  L+ A  L Q  +  G    A T+NTLI  +     +  A  +F EM + G  
Sbjct: 546 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 605

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   Y +LI+  CK     +A   +  MI  G IP   T+  ++   + N    + + +
Sbjct: 606 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGI 665

Query: 626 HDDMVLSGVSPD 637
              MV  GV P+
Sbjct: 666 IHIMVKIGVVPE 677



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 6/424 (1%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           A P V  ++ L+R   +    + A   ++++  +G       +N  +    K++ +    
Sbjct: 254 AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEAT 313

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L K+ V  G+V +  T+  +I  LC E  +E AL L+      GI P++V +N ++   
Sbjct: 314 ELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGL 373

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G +  AL++   M  M+ +   P+  T+N +ING CK+G +  A  +    I  G  
Sbjct: 374 CLQGLILHALQV---MNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 430

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+ TLIDGY +    + AL+L + M + G+ P+ + YNS ++ L   G V      
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 490

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +MI K   P+  TY+IL +  CR+  +++A K+  ++ +E +  DA S+N LI   C+
Sbjct: 491 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 550

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L  A  L   +  +G      T+ TLI  +    N+  A ++++ M     + +   
Sbjct: 551 NGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYT 610

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +I+G CK A++D A   L    + G + ++ T+  +IN   +N ++ +A  +   M 
Sbjct: 611 YRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMV 670

Query: 561 NVGI 564
            +G+
Sbjct: 671 KIGV 674


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 267/509 (52%), Gaps = 5/509 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ ++      G  E AY ++++ + KG   S+ ++N  LS L +  ++    K ++EM 
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
               + N++T+N++I  LCK  KLE AL +   M  +G++PNV+  N++++  C+   L+
Sbjct: 403 K-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +F  +      +  P++VT+  +I G  + GRV+ A ++   M+ A    N   Y 
Sbjct: 462 DACSIFEGL---DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LI  + + G  E+  ++ +EM++ G  P+ ++ N+ +  +F  G++E    +  ++ + 
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNL 578

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  +Y+IL  GL + G   +A++L   + E+  V D  +YN +I+  CKS  +  A
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            QLL  M  +G  P ++TYG++IDG  K   ++ A  ++E  K    + N+VIY+S+I+G
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
             K   +D A  +++   + GL   + T+N L++      +I+EA   F  M+++    N
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ILI+ LCK   + +A    + M   G  P+  TYTT+++  +K  +  E   L +
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                G   D+  YNAII  L     A D
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASD 847



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 234/485 (48%), Gaps = 5/485 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+  IQ ++      +  A+ N +  L    +      L+++M   GY  NV+ F  +I 
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR 243

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
              +E +++ ALSL   M  + + P+VV +N+ I+   + G ++ A K F +   M  + 
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHE---MKANG 300

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++ + VT+  +I   CK  R+  A E+   M +         Y T+I GY   G  E+A 
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L +   ++G +P+ V YN  +  L  +G V+ AL    +M  K   P+  TY+I+   L
Sbjct: 361 SLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDML 419

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G ++ A  + + + +  +  +  + NI+++ LCK+  L  A  +   +  +   PD 
Sbjct: 420 CKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDA 479

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY +LI+G  + G ++ A ++YE M    + PN V+Y S+I    K    +    +   
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             R+G   D +  NT ++  F  G+I +  A+F E++N+G   +   Y ILI+ L K G 
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A EL   M   G + D   Y T++  F K+    +  +L ++M   G  P   TY +
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659

Query: 644 IISPL 648
           +I  L
Sbjct: 660 VIDGL 664



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 199/403 (49%), Gaps = 4/403 (0%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           + +  L +   +   +KLY++M+    + N   +  +I    K  + E+   +Y  ML+ 
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+++  N  ++   + G++E    LF+++  +     +P++ ++  +I+G  K G  
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG---FIPDARSYTILIHGLVKAGFA 600

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A E+ Y M + G   + R Y T+IDG+ + G   +A +L +EM  +G  P  V Y S 
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L     ++ A  +  +   K I  +   YS L  G  + G + +A+ +  +++++ +
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             + Y++N L++ L K+  ++ A     SM      P+ ITY  LI G CK      A  
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFV 780

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYF 544
            ++ M+K   KPN+  Y ++I+GL K  ++  A +L +   ++ G+ D+  YN +I G  
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLS 840

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
              + ++A+ +F E R  G ++      +L++ L K  C +QA
Sbjct: 841 NANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 183/394 (46%), Gaps = 20/394 (5%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
           C+++  L    R D+A  L   ++ AN +                     V+ +L+R   
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIP-----------------NAVVYTSLIRNFF 525

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           + G  E  + +  ++   G S  +   N ++  + K  EI +   L++E+ + G++ +  
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           ++ ++I+ L K     EA  L+Y M + G   +   +N +I+  C+ G +  A +L  +M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                +   P  VT+  +I+G  K+ R++ A  +       GI+ NV  Y++LIDG+ + 
Sbjct: 646 KTKGHE---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +EA  + +E++++GL PN   +N  +  L    ++  AL     M D    P++ TY
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY 762

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           SIL  GLC+     +AF    ++ ++    + ++Y  +I+ L K+ N+  A  L      
Sbjct: 763 SILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +G + D   Y  +I+G         A +++E  +
Sbjct: 823 KGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 150/331 (45%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  LI   +    S+  L L  +M + G   N  ++ + I     EG V+ AL +L +M
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD   Y++      + G V  A+K  +++    +V D  +Y  +I  LCK++ L
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRL 321

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L   M     +P    Y T+I GY   G  E A  + E  ++    P++V YN I
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           ++ L +   +D A    +  ++  + +  TYN +I+     GK+  A  +   M++ G+ 
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N +  NI+++ LCK      A  + + +      PD VTY +L+    ++   +E  +L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++ M+ +   P+   Y ++I         ED
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKED 532



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 150/341 (43%), Gaps = 2/341 (0%)

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           E+I   M  AG   +  T   ++  + +     EA      M K    P    Y + I  
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L    D +  L +   M +     +   ++ L +   R G V  A  L +++    +  D
Sbjct: 210 LSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPD 269

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              YN+ I+   K+  +  A +    M   GL+ D +TY ++I   CK   +  AV+++E
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFE 329

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFING 547
           +M + ++ P    YN++I G       + A SLL+  +R G + + ++YN +++     G
Sbjct: 330 HMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG 389

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ EA   F EM+   I  N   YNI+I+ LCK G  + A  +   M   G+ P+ +T  
Sbjct: 390 QVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVN 448

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +V R  K    ++   + + +      PD  TY ++I  L
Sbjct: 449 IMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489


>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
 gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 163/546 (29%), Positives = 269/546 (49%), Gaps = 14/546 (2%)

Query: 32  EDIVFRAICVNLRQRKWK-ILEQMAPS--LTNSLVNRVVSEFR-----KSPKLALEFYTW 83
           E ++ ++IC  + +  WK IL+    S  L +++  +V+SE         P L+  F+ W
Sbjct: 10  EALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIW 69

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EIC 142
                   HSL+SS  ++ +L   + F  A  L+  L     +S    L  L+    E  
Sbjct: 70  TDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDP 129

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +    VF  L+    + G    +  V ++++  G    + A    L+ LVK       WK
Sbjct: 130 EDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++K+MV  G V N++ +N++++A  K    E+A  L   M + G++P++  +N +I+  C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +      AL +  +M       V PN VT+N  I+GF + GR+  A  + +  IK  +  
Sbjct: 250 KKSMHFEALSVQDRM---ERSGVAPNIVTYNSFIHGFSREGRMREATRL-FREIKDDVTA 305

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY TLIDGY R    +EALRL + M  RG  P  V YNS +  L  +G +  A  +L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M  K I PD+ T + L    C+   +  A K+  +++E  +  D YSY  LI+  CK 
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  AK+ L SMI +G  P   TY  L+DG+      +   ++ E  +K     ++ +Y
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +I  +CK   +D AK L ++ ++ GL+ D++ + T+   Y+  GK+ EA A+F  M N
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYN 545

Query: 562 VGIAVN 567
             + VN
Sbjct: 546 RRLMVN 551



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 179/371 (48%), Gaps = 4/371 (1%)

Query: 278 GVMSGDSVLPNSVTH--NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            ++ G S  P  V+H  + ++  + K G +  +  +   +   G+  +++    L++   
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           +   ++   ++  +MVK G++ N  VYN  +H     GD E A  +LS+M +K + PD F
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY+ L    C+     +A  + +++    +  +  +YN  I+   +   +  A +L    
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE- 298

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           I   +  + +TY TLIDGYC+  +I+ A+++ E M+     P +V YNSI+  LC+D  +
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358

Query: 516 DAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
             A  LL + S +    D IT NTLIN Y     +  A  +  +M   G+ ++   Y  L
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I+  CK    + A+E +  MI  G  P Y TY+ LV  F      +E+ +L ++    G+
Sbjct: 419 IHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478

Query: 635 SPDNQTYNAII 645
             D   Y  +I
Sbjct: 479 CADVALYRGLI 489



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 152/321 (47%), Gaps = 18/321 (5%)

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTI--------------HWLF----AEGDVEGALFVLSD 384
           A +L D++ +R L+ + +V  S +               WL       G +  ++ V   
Sbjct: 99  AHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQ 158

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           +    + P     ++L   L +       +K+  ++++  +V + + YN+L++   KS +
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
              A++LLS M  +G+ PDI TY TLI  YCK      A+ V + M++    PN+V YNS
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
            I+G  ++  +  A  L +  +     + +TY TLI+GY     I EA  +   M + G 
Sbjct: 279 FIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGF 338

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           +   V YN ++  LC+ G  ++A  L+  M    I PD +T  TL+  + K       ++
Sbjct: 339 SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           +   M+ SG+  D  +Y A+I
Sbjct: 399 VKKKMIESGLKLDMYSYKALI 419



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 156/331 (47%), Gaps = 2/331 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           ++ L+  YA+ G   +++ + +++   GL P+       ++ L  +   +    +   M+
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +  +   Y++L     ++G  ++A KL +++ E+ +  D ++YN LI+  CK +   
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +   M   G+ P+I+TY + I G+ + G +  A +++  +K  +   N V Y ++I
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLI 314

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G C+   +D A  L +  +  G    + TYN+++     +G+I EA  + +EM    I 
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + +  N LIN  CK      A ++ K MI  G+  D  +Y  L+  F K    E   E 
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              M+  G SP   TY+ ++     +   ++
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/390 (22%), Positives = 163/390 (41%), Gaps = 68/390 (17%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ LV AC++ G  E A  ++ +++ KG    I  +N  +S   K +       +   M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N+ T+N  I+   +E ++ EA  L+ R +K  +  N V +  +I+  C++ D+
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIKDDVTANHVTYTTLIDGYCRMNDI 323

Query: 268 EFALKLFRKM-------GV-------------------------MSGDSVLPNSVTHNCI 295
           + AL+L   M       GV                         MSG  + P+++T N +
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           IN +CK+  +  A +++  MI++G+  ++ +Y  LI G+ +    E A      M+++G 
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P    Y+  +   + +   +    +L +   + +C D   Y    +GL R         
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY----RGLIRR-------- 491

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
                                  +CK   +  AK L  SM  +GL+ D + + T+   Y 
Sbjct: 492 -----------------------ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYW 528

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           + G +  A  +++ M       NL +Y SI
Sbjct: 529 RTGKVTEASALFDVMYNRRLMVNLKLYKSI 558


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 267/509 (52%), Gaps = 5/509 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ ++      G  E AY ++++ + KG   S+ ++N  LS L +  ++    K ++EM 
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
               + N++T+N++I  LCK  KLE AL +   M  +G++PNV+  N++++  C+   L+
Sbjct: 403 K-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +F  +      +  P++VT+  +I G  + GRV+ A ++   M+ A    N   Y 
Sbjct: 462 DACSIFEGL---DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LI  + + G  E+  ++ +EM++ G  P+ ++ N+ +  +F  G++E    +  ++ + 
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNL 578

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  +Y+IL  GL + G   +A++L   + E+  V D  +YN +I+  CKS  +  A
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKA 638

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            QLL  M  +G  P ++TYG++IDG  K   ++ A  ++E  K    + N+VIY+S+I+G
Sbjct: 639 YQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDG 698

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
             K   +D A  +++   + GL   + T+N L++      +I+EA   F  M+++    N
Sbjct: 699 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPN 758

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ILI+ LCK   + +A    + M   G  P+  TYTT+++  +K  +  E   L +
Sbjct: 759 YITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFE 818

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                G   D+  YNAII  L     A D
Sbjct: 819 KFKEKGGVADSAIYNAIIEGLSNANRASD 847



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 234/485 (48%), Gaps = 5/485 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+  IQ ++      +  A+ N +  L    +      L+++M   GY  NV+ F  +I 
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR 243

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
              +E +++ ALSL   M  + + P+VV +N+ I+   + G ++ A K F +   M  + 
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHE---MKANG 300

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++ + VT+  +I   CK  R+  A E+   M +         Y T+I GY   G  E+A 
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAY 360

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L +   ++G +P+ V YN  +  L  +G V+ AL    +M  K   P+  TY+I+   L
Sbjct: 361 SLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLSTYNIMIDML 419

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G ++ A  + + + +  +  +  + NI+++ LCK+  L  A  +   +  +   PD 
Sbjct: 420 CKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDA 479

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY +LI+G  + G ++ A ++YE M    + PN V+Y S+I    K    +    +   
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             R+G   D +  NT ++  F  G+I +  A+F E++N+G   +   Y ILI+ L K G 
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A EL   M   G + D   Y T++  F K+    +  +L ++M   G  P   TY +
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659

Query: 644 IISPL 648
           +I  L
Sbjct: 660 VIDGL 664



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 199/403 (49%), Gaps = 4/403 (0%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           + +  L +   +   +KLY++M+    + N   +  +I    K  + E+   +Y  ML+ 
Sbjct: 484 SLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+++  N  ++   + G++E    LF+++  +     +P++ ++  +I+G  K G  
Sbjct: 544 GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG---FIPDARSYTILIHGLVKAGFA 600

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A E+ Y M + G   + R Y T+IDG+ + G   +A +L +EM  +G  P  V Y S 
Sbjct: 601 HEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSV 660

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L     ++ A  +  +   K I  +   YS L  G  + G + +A+ +  +++++ +
Sbjct: 661 IDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 720

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             + Y++N L++ L K+  ++ A     SM      P+ ITY  LI G CK      A  
Sbjct: 721 TPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFV 780

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYF 544
            ++ M+K   KPN+  Y ++I+GL K  ++  A +L +   ++ G+ D+  YN +I G  
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLS 840

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
              + ++A+ +F E R  G ++      +L++ L K  C +QA
Sbjct: 841 NANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 183/394 (46%), Gaps = 20/394 (5%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
           C+++  L    R D+A  L   ++ AN +                     V+ +L+R   
Sbjct: 483 CSLIEGLGRHGRVDEAYKLYEQMLDANQIP-----------------NAVVYTSLIRNFF 525

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           + G  E  + +  ++   G S  +   N ++  + K  EI +   L++E+ + G++ +  
Sbjct: 526 KCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDAR 585

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           ++ ++I+ L K     EA  L+Y M + G   +   +N +I+  C+ G +  A +L  +M
Sbjct: 586 SYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 645

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                +   P  VT+  +I+G  K+ R++ A  +       GI+ NV  Y++LIDG+ + 
Sbjct: 646 KTKGHE---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +EA  + +E++++GL PN   +N  +  L    ++  AL     M D    P++ TY
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY 762

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           SIL  GLC+     +AF    ++ ++    + ++Y  +I+ L K+ N+  A  L      
Sbjct: 763 SILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +G + D   Y  +I+G         A +++E  +
Sbjct: 823 KGGVADSAIYNAIIEGLSNANRASDAYRLFEEAR 856



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 150/331 (45%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  LI   +    S+  L L  +M + G   N  ++ + I     EG V+ AL +L +M
Sbjct: 202 AYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM 261

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD   Y++      + G V  A+K  +++    +V D  +Y  +I  LCK++ L
Sbjct: 262 KSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRL 321

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L   M     +P    Y T+I GY   G  E A  + E  ++    P++V YN I
Sbjct: 322 NEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCI 381

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           ++ L +   +D A    +  ++  + +  TYN +I+     GK+  A  +   M++ G+ 
Sbjct: 382 LSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLF 441

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N +  NI+++ LCK      A  + + +      PD VTY +L+    ++   +E  +L
Sbjct: 442 PNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKL 501

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++ M+ +   P+   Y ++I         ED
Sbjct: 502 YEQMLDANQIPNAVVYTSLIRNFFKCGRKED 532



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 150/341 (43%), Gaps = 2/341 (0%)

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           E+I   M  AG   +  T   ++  + +     EA      M K    P    Y + I  
Sbjct: 150 EQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGA 209

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L    D +  L +   M +     +   ++ L +   R G V  A  L +++    +  D
Sbjct: 210 LSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPD 269

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              YN+ I+   K+  +  A +    M   GL+ D +TY ++I   CK   +  AV+++E
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFE 329

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFING 547
           +M + ++ P    YN++I G       + A SLL+  +R G + + ++YN +++     G
Sbjct: 330 HMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKG 389

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ EA   F EM+   I  N   YNI+I+ LCK G  + A  +   M   G+ P+ +T  
Sbjct: 390 QVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVN 448

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +V R  K    ++   + + +      PD  TY ++I  L
Sbjct: 449 IMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL 489


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 277/570 (48%), Gaps = 67/570 (11%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +  L+    + G T+    +++KL+  GHSV   +  +N  +  L K   +G    LY E
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLE--GHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSE 228

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   NV T+N ++Y  C    L+EA SL   M    I P+V  FN +I+   + G 
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A  +   + VM    + P+ VT+N +I+G+  L +V+ A+ + Y+M ++G+  NVRT
Sbjct: 289 MKAAKIV---LAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRT 345

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y T+IDG  +    +EA+ L +EM  + ++P+ V Y S I  L     +E A+ +   M 
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK 405

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ I PD ++Y+IL   LC+ G ++ A +   ++L +    +  +YN++IN LCK++   
Sbjct: 406 EQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFG 465

Query: 447 -----------------------------------AAKQLLSSMIVRGL----------- 460
                                               A+++L  MI RGL           
Sbjct: 466 EAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA 525

Query: 461 ------------IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
                        PD++TYGTL+DGY     ++ A  V+ +M ++   PN+  Y  +I+G
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK  ++D A SL +  +   +  + +TY +LI+    N  +  A A+  EM+  GI  +
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              Y IL++ LCK G  + A+E+ + +++ G   +   YT ++    K    +E ++L  
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQX 705

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
            M   G  PD  T++ II  L  EK   D+
Sbjct: 706 KMEDKGCMPDAVTFDIIIWALF-EKDENDK 734



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 225/440 (51%), Gaps = 5/440 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L         +SL+ +   +G  P++   N+++N  C +  + FA   F  + 
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFA---FSVLA 122

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      PN++T N +I G C  G ++ A      ++  G   N  +Y TLI+G  + G
Sbjct: 123 NILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTG 182

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            ++   RL  ++    + P+ V+YN+ IH L     +  A  + S+MI K I P+  TY+
Sbjct: 183 ETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYN 242

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +K+AF L N++  +++  D  ++N LI+ L K   + AAK +L+ M+  
Sbjct: 243 ALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKA 302

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            + PD++TY +LIDGY     ++ A  V+ +M +    PN+  Y ++I+GLCK+  +D A
Sbjct: 303 CIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEA 362

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            SL +  +   ++ D +TY +LI+G   N  +  A A+  +M+  GI  +   Y IL++ 
Sbjct: 363 MSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA 422

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G  + A+E  + +++ G   +  TY  ++    K     E ++L   M   G  PD
Sbjct: 423 LCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482

Query: 638 NQTYNAIISPLLGEKSAEDQ 657
             T+  II  L  EK   D+
Sbjct: 483 AITFKTIICALF-EKDENDK 501



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 239/513 (46%), Gaps = 27/513 (5%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           + +K +  G +  +   N  ++    L  I   + +   ++  GY  N  T N +I  LC
Sbjct: 85  LFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLC 144

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
              ++++AL  + +++  G   N V +  +IN  C+ G+ +   +L RK   + G SV P
Sbjct: 145 FRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRK---LEGHSVKP 201

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           + V +N II+  CK   +  A ++   MI  GI  NV TY  L+ G+   G  +EA  L 
Sbjct: 202 DVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLL 261

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EM  + + P+   +N+ I  L  EG ++ A  VL+ M+   I PD  TY+ L  G    
Sbjct: 262 NEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFL 321

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             VK A  +   + +  +  +  +Y  +I+ LCK   +  A  L   M  + +IPDI+TY
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTY 381

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            +LIDG CK  ++E A+ + + MK+   +P++  Y  +++ LCK   L+ AK   Q    
Sbjct: 382 TSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLV 441

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G  L+  TYN +ING        EA  + S+M   G   + + +  +I  L +     +
Sbjct: 442 KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDK 501

Query: 587 ARELMKVMILHG-----------------------IIPDYVTYTTLVTRFSKNCSPEEVI 623
           A ++++ MI  G                       I PD VTY TL+  +      +   
Sbjct: 502 AEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAK 561

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +   M   GV+P+ Q Y  +I  L  +K+ ++
Sbjct: 562 YVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 223/453 (49%), Gaps = 4/453 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  LS LV          L+K+  S G   ++ T N+++   C    +  A S+   +L
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  PN +  N +I   C  G+++ AL  F    V  G  +  N V++  +ING CK G
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKAL-YFHDQVVAQGFQL--NQVSYRTLINGLCKTG 182

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             +    +   +    +  +V  Y T+I    +     +A  L  EM+ +G+ PN V YN
Sbjct: 183 ETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYN 242

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + ++     G ++ A  +L++M  K+I PD  T++ L   L + G +K A  +   +++ 
Sbjct: 243 ALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKA 302

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D  +YN LI+     N +  AK +  SM   G+ P++ TY T+IDG CK   ++ A
Sbjct: 303 CIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEA 362

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           + ++E MK     P++V Y S+I+GLCK+  L+ A +L +  +  G+  D  +Y  L++ 
Sbjct: 363 MSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA 422

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G++  A   F  +   G  +N   YN++IN LCK   + +A +L   M   G +PD
Sbjct: 423 LCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
            +T+ T++    +    ++  ++  +M+  G+ 
Sbjct: 483 AITFKTIICALFEKDENDKAEKILREMIARGLQ 515



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 190/412 (46%), Gaps = 28/412 (6%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP V  +  ++    +    + A  + +++K K     I  + + +  L K + + R   
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L K+M   G   +V ++ +++ ALCK  +LE A   + R+L  G   NV  +N++IN  C
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI------ 316
           +      A+ L  KM    G   +P+++T   II    +    + AE+I   MI      
Sbjct: 460 KADLFGEAMDLKSKM---EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQE 516

Query: 317 -----------------KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
                            KA I  +V TY TL+DGY      + A  +   M + G+ PN 
Sbjct: 517 ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNV 576

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             Y   I  L  +  V+ A+ +  +M  K++ P+  TY+ L   LC+N  +++A  L  +
Sbjct: 577 QCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKE 636

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E  +  D YSY IL++ LCKS  L  AK++   ++V+G   ++  Y  +I+  CK G 
Sbjct: 637 MKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            + A+ +   M+     P+ V ++ II  L +    D A+ +L      GL+
Sbjct: 697 FDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 26/338 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+ A  + G  E A +  Q+L VKG+ +++  +N  ++ L K +  G    L  +M 
Sbjct: 416 YTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475

Query: 209 SCGYVENVNTFNLVIYAL-----------------------CKECKLEEALSLYYRMLKS 245
             G + +  TF  +I AL                        ++ +L+EA  +   M K+
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKA 535

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
            I P+VV +  +++    V +L+ A  +F  M  M    V PN   +  +I+G CK   V
Sbjct: 536 CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMG---VTPNVQCYTIMIDGLCKKKTV 592

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + A  +   M    +  N+ TY +LID   +    E A+ L  EM + G+ P+   Y   
Sbjct: 593 DEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTIL 652

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           +  L   G +EGA  +   ++ K    +   Y+ +   LC+ G   +A  L  ++ ++  
Sbjct: 653 LDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGC 712

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           + DA +++I+I  L + +    A+++L  MI RGL+ +
Sbjct: 713 MPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P  F ++ +   L  N        L  +        D  + NIL+N  C   ++  A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L++++ RG  P+ IT  TLI G C  G I+ A+  ++ +     + N V Y ++INGLCK
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
                A   LL+  +   +  D + YNT+I+    N  + +A  ++SEM   GI+ N V 
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN L+   C  G  ++A  L+  M L  I PD  T+ TL+    K    +    +   M+
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 631 LSGVSPDNQTYNAIIS 646
            + + PD  TYN++I 
Sbjct: 301 KACIKPDVVTYNSLID 316


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 170/594 (28%), Positives = 283/594 (47%), Gaps = 44/594 (7%)

Query: 58  LTNSLVNRVVSEFR-KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
           L +S V++++     +    A++FY  +     F HS  S   + H+L   +R ++  L+
Sbjct: 89  LNHSQVDQIIEHLNVEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKKRLNELRLV 148

Query: 117 MGN-LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           +   L+   S S     E LL S+    ++  V+D L  A ++      A  V+ K+K  
Sbjct: 149 LDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDL 208

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
              VSI  +N+ L +L   N +   W +Y E+   G  ++  T ++V+  LC++ + ++A
Sbjct: 209 NFIVSIQTYNSLLYNLRHSNIM---WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDA 265

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           + L+++                        D E             G    P+ V+ N I
Sbjct: 266 V-LFFQ------------------------DTE-------------GKEFQPSVVSFNTI 287

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++ +CKLG V+ A+     M+K G+  +  +Y  LI G    GS  EAL L ++M   GL
Sbjct: 288 MSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGL 347

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+ V YN         G + GA  ++  M+ K   P+  TY++L  G C+ G V++A K
Sbjct: 348 EPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALK 407

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L+ +++         S  +L+  LCKS  +  A +L   M   GL PD+ITY TLI G C
Sbjct: 408 LYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLC 467

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K G ++ A+ +YE M      PN +I+ +I+ GLC+   +  A+          L LD I
Sbjct: 468 KQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDII 527

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN +I+GY   G   EA  ++ ++   GI+   V +N L+   C      QAR L+  +
Sbjct: 528 LYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI 587

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            LHG+ P+ VTYTTL+  + +  + + ++EL  +M    + P + TY  +I  L
Sbjct: 588 KLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGL 641



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 252/489 (51%), Gaps = 6/489 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             ++ L +    +G   GA+++IQK+ +KG + ++  +   +    ++  +    KLYKE
Sbjct: 352 VTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKE 411

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+S G+  ++ +  +++ +LCK  +++ A  L+  M  +G+ P+++ ++ +I+  C+ G+
Sbjct: 412 MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGE 471

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A+ L+ KM     + ++PNS+ H  I+ G C+ G++  A      +I + +  ++  
Sbjct: 472 VQQAILLYEKM---CSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIIL 528

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  +IDGY + G++ EA++L  ++ ++G+ P  V +NS ++       +  A  +L D I
Sbjct: 529 YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL-DTI 587

Query: 387 DKH-ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             H + P+  TY+ L    C  G ++   +L +++  + +     +Y ++I  LCK   L
Sbjct: 588 KLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKL 647

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             + QLL  M   GL PD ++Y T+I  +CK  ++  A Q+Y+ M     +P  V YN +
Sbjct: 648 QESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNIL 707

Query: 506 INGLCKDASLDAAKSLLQASQ-RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ING C    L  A +LL + Q R   L+   Y T+I  +   G + +A   F +M   G 
Sbjct: 708 INGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF 767

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            V+   Y+ +I  LCK     +A+    +M+  G+ PD   +  L+  F +        E
Sbjct: 768 EVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFE 827

Query: 625 LHDDMVLSG 633
           L  +M+ SG
Sbjct: 828 LLAEMIKSG 836



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 1/284 (0%)

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           + A+    D   K   P   +++ +    C+ G V  A      +L+  ++ DAYSYNIL
Sbjct: 263 QDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNIL 322

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ LC + ++  A  L + M   GL PD++TY  L  G+   G I GA  + + M     
Sbjct: 323 IHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGP 382

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE-AFA 554
            PNLV Y  +I G C+  +++ A  L +     G   +I  +T++ G     +  + AF 
Sbjct: 383 NPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFK 442

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F EM   G+  + + Y+ LI+ LCK G  QQA  L + M  + IIP+ + +  ++    
Sbjct: 443 LFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLC 502

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +     +     D ++ S +S D   YN +I   +   +  + V
Sbjct: 503 EKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAV 546



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 6/322 (1%)

Query: 340 SEEALRLCDEMVK--RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           S  A  LC+ ++   R    +NVV++           V  ALFVL  M D +      TY
Sbjct: 158 SGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTY 217

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L   L  +  +   + ++N++         Y+ +I+++ LC+ +    A         
Sbjct: 218 NSLLYNLRHSNIM---WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEG 274

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           +   P ++++ T++  YCK G ++ A   +  M K    P+   YN +I+GLC   S+  
Sbjct: 275 KEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGE 334

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  L    +  GL  D +TYN L  G+ + G I  A+ +  +M   G   N V Y +LI 
Sbjct: 335 ALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLIC 394

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C+ G  ++A +L K MI HG     ++ T L+    K+   +   +L  +M  +G+ P
Sbjct: 395 GHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRP 454

Query: 637 DNQTYNAIISPLLGEKSAEDQV 658
           D  TY+ +I  L  +   +  +
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAI 476



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 28/135 (20%), Positives = 64/135 (47%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   ++ L+      G  + A +++  L+ +  +++ +A+   +       ++ +   
Sbjct: 698 EPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVV 757

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            +++MV  G+  ++  ++ VI  LCK C + EA   +  ML  G+ P+   F +++N   
Sbjct: 758 YFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFH 817

Query: 263 QVGDLEFALKLFRKM 277
           Q G L    +L  +M
Sbjct: 818 QCGHLNSEFELLAEM 832


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 291/628 (46%), Gaps = 38/628 (6%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNR-FSH---------SLESSCAIVH 102
           +M   + N ++ R  S    +    L+ Y  +G+ +R  SH         +  + C ++H
Sbjct: 41  KMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIH 100

Query: 103 LLVNWRRFDDALLLMGNLMSANSVSPLE----FLEGLLDSYEI--------------CKA 144
            L   +R D+A  L+  ++  +           + GL    +I              C  
Sbjct: 101 GLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVP 160

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
               + +L+  C Q  A + A  +++K+K  G +    A+N  L+ L K N++    KL 
Sbjct: 161 DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLL 220

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           +EMV  G   +  ++N V+  LC+  K EEA  +  +M++    P+VV +N +++  C+V
Sbjct: 221 EEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKV 280

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             ++ A +L      M G    P  +T+  +I GF +  R+  A  +   M KAGI  ++
Sbjct: 281 SKMDEAERLLED---MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  L+DG  + G  EEA  L + MV++   P+ V Y+  ++ L   G V+ A  +L  
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+++   P+  T++ +  G C+ G V +  K+   + E     D  +Y+ LI+  CK+N 
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A  +L      G+ PD  +Y ++++G C  G +E A +V + M K    P    Y  
Sbjct: 458 MQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYAL 511

Query: 505 IINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           II GLC     D A  +LQ  S+R    +  TY+ LING     ++ +A  +   M   G
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKG 571

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
              +   Y  LI+  CK      A +  K M   G  PD + Y  L++ F ++ + E+ I
Sbjct: 572 CVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAI 631

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           E+   M+  G +PD  TY +++  L  E
Sbjct: 632 EVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 240/473 (50%), Gaps = 10/473 (2%)

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +  L +   I   ++L  EM+      +   +N +I  LCK  K++ A ++   ML+  
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P+V+ +  +I   CQ   L+ A KL  KM       + P++V +N ++NG CK  ++E
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKM---KESGLTPDTVAYNALLNGLCKQNQLE 214

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
              ++   M++AG + +  +Y T++      G  EEA ++ ++M+++   P+ V YNS +
Sbjct: 215 EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
                   ++ A  +L DM+ +   P   TY+ L  G  R   +  A+++   + +  + 
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +YN L++ LCK+  L  A +LL  M+ +   PD++TY  L++G CK G ++ A  +
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLL 394

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFI 545
            E M +   +PNLV +N++I+G CK   +D    +L+  + +    D +TY+TLI+GY  
Sbjct: 395 LEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK 454

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
             ++ +AFA+       GI+ +K  Y+ ++  LC  G  ++A+E+M +M   G  P    
Sbjct: 455 ANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSH 508

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           Y  ++         +E +++   M   G  P+  TY+ +I+ L   K  ED +
Sbjct: 509 YALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAI 561



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 240/454 (52%), Gaps = 16/454 (3%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW--PNVVCFNMIINEACQ 263
           EM++  +  +V T N ++ A C+   L+ ALS +    +  +W  P    + ++I+  CQ
Sbjct: 49  EMLARRFSPDVITHNTILKAYCQIGDLDRALSHF----RGKMWCSPTAFTYCILIHGLCQ 104

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
              ++ A +L  +M         P++  +NC+I G CK+G+++ A  +   M++     +
Sbjct: 105 CQRIDEAYQLLDEM---IQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPD 161

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY +LI G  +  + +EA +L ++M + GL P+ V YN+ ++ L  +  +E    +L 
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M++    PD F+Y+ +   LC +G  ++A K+  +++E+    D  +YN L++  CK +
Sbjct: 222 EMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS 281

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A++LL  M+ R   P +ITY TLI G+ +   +  A +V E+M K    P+LV YN
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYN 341

Query: 504 SIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +++GLCK   L+ A  LL+   ++    D +TY+ L+NG    GK+ +A  +   M   
Sbjct: 342 CLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   N V +N +I+  CK G   +  +++++M      PD VTY+TL+  + K       
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCK------A 455

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             + D   + G+SPD  +Y++++  L      E+
Sbjct: 456 NRMQDAFAILGISPDKASYSSMLEGLCSTGKVEE 489



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 175/325 (53%), Gaps = 5/325 (1%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  LI G++R G+S+  L + +EM+ R   P+ + +N+ +      GD++ A   LS  
Sbjct: 26  TYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA---LSHF 82

Query: 386 IDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
             K  C P  FTY IL  GLC+   + +A++L ++++++    DA  YN LI  LCK   
Sbjct: 83  RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGK 142

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           + AA+ +L  M+ R  +PD+ITY +LI G C+   ++ A ++ E MK+    P+ V YN+
Sbjct: 143 IDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNA 202

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           ++NGLCK   L+    LL+     G   D  +YNT++     +GK  EA  +  +M    
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
              + V YN L++  CK     +A  L++ M+     P  +TYTTL+  FS+     +  
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            + +DM  +G+SPD  TYN ++  L
Sbjct: 323 RVMEDMFKAGISPDLVTYNCLLDGL 347



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 1/195 (0%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P   TYG LI G+ + GN +  +++   M      P+++ +N+I+   C+   LD A S 
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
            +         A TY  LI+G     +I EA+ +  EM       +   YN LI  LCK 
Sbjct: 82  FRGKMWCSPT-AFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G    AR ++K+M+    +PD +TYT+L+    +  + +E  +L + M  SG++PD   Y
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200

Query: 642 NAIISPLLGEKSAED 656
           NA+++ L  +   E+
Sbjct: 201 NALLNGLCKQNQLEE 215


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 168/625 (26%), Positives = 305/625 (48%), Gaps = 42/625 (6%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
            P+L  +L NR+ +     P++AL           +++S+   C         RR D A 
Sbjct: 79  GPALAVALFNRMSTG--TGPRVALP--------TVYTYSILIDCC-----CRARRLDLAF 123

Query: 115 LLMGNL----MSANSVSPLEFLEGLLDSYEICKATPAVF----------DAL-----VRA 155
              G L    M A+ +     L GL D+    +A   +F          DA+     +++
Sbjct: 124 AFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKS 183

Query: 156 CTQIGATEGAYDVIQKLKVK---GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
               G ++ A D++ ++ VK   G   ++  ++  +  L K  ++G    L+ EM   G 
Sbjct: 184 VCDDGRSQWALDIL-RMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGV 242

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             NV T+N VI+ALCK   +++A  +  +M+ +G+ P+ V +N +I+    +G  + A++
Sbjct: 243 PPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVR 302

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +F++M   +   V+PN+VT +  +   CK GR+E A E   +M+  G   N+ +Y+TL+ 
Sbjct: 303 MFKEM---TSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLH 359

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GYA  G   +   L + MV+ G++PN  V+N  ++     G V  A+F+  DM  + + P
Sbjct: 360 GYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNP 419

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TY  +    CR G +  A    N ++++ +  +   Y  LI   C   +L  A++L+
Sbjct: 420 DVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELV 479

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             +  +GL P I+++ +LI+  CK G +  A ++++ + +  +K ++ I+ S+I+G C  
Sbjct: 480 YEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLI 539

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  A  +  A   +G+  D +TY TL+NG   NG+I +   +F E+ + G+      Y
Sbjct: 540 GKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTY 599

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
            I+++ L   G    A+E+ + MI  GI     TY+ L+T   +N   EE I +   +  
Sbjct: 600 GIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCA 659

Query: 632 SGVSPDNQTYNAIISPLLGEKSAED 656
             V  D    N +IS +   +  E+
Sbjct: 660 MNVKFDIVILNIMISKMFKARRREE 684



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 217/456 (47%), Gaps = 4/456 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E A +    +  KGH ++I +++  L        +     L+  MV  G V N + F
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+++    K   + EA+ ++  M K G+ P+V+ +  +I+  C++G ++ A+  F  M  
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM-- 447

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                V PN   + C+I GFC  G +  AEE+ Y +   G+   + ++A+LI+   + G 
Sbjct: 448 -IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA R+ D +++ G   +  ++ S I      G +  A  V   M+   I PD  TY  
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+NG +     L  ++L + +    ++Y I+++ L  +   AAAK++   MI  G
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +   I TY  L+ G C+    E A+ V++ +  +  K ++VI N +I+ + K    + A+
Sbjct: 627 IAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAE 686

Query: 520 SLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L  +    GL+  + TY  ++      G + EA  +FS M   G++      N+++  L
Sbjct: 687 GLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTL 746

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
            + G   +A   M  +    I+ +  T + L++ FS
Sbjct: 747 LEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFS 782



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 189/405 (46%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ LV    + G    A  + + ++ +G +  +  +   +    ++  +      +  M
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N   +  +I   C    L +A  L Y +   G+ P ++ F  +IN  C+ G +
Sbjct: 448 IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRV 507

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A ++F  M + +G+    N  T   +I+G+C +G++  A  +  AM+  GI+ ++ TY
Sbjct: 508 FEAQRIF-DMIIRTGEKADVNIFTS--LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++G  + G  ++ L L  E++ +G+ P    Y   +  LF  G    A  +  +MI+
Sbjct: 565 GTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I     TYSIL  GLCRN C ++A  +  ++   ++  D    NI+I+ + K+     
Sbjct: 625 SGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREE 684

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+ L +S+   GL+P + TY  +++   K G++E A  V+  M K    P     N I+ 
Sbjct: 685 AEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVR 744

Query: 508 GLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
            L +   +  A   + +   +  L +A T + L++ +   GK  E
Sbjct: 745 TLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHRE 789



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 24/213 (11%)

Query: 109 RFDDALLLMGNLMSANSVSPLEF-----LEGLLDSYEICKA--------------TPAVF 149
           R DD L+L   L+    V P  F     L+GL  +     A              T   +
Sbjct: 576 RIDDGLILFRELLH-KGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
             L+    +   TE A  V QKL        I   N  +S + K         L+  +  
Sbjct: 635 SILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPD 694

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V  V T+ +++  L KE  +EEA  ++  MLKSG+ P     N+I+    + G++  
Sbjct: 695 YGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEI-- 752

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGF-CK 301
            +K    M  + G S+L  + T + +++ F CK
Sbjct: 753 -VKAGIYMCRVDGKSILFEASTASMLLSLFSCK 784


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 256/517 (49%), Gaps = 22/517 (4%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + A+++A  + G  +  ++++ +L   G   ++  +N  +  L K   +   ++L   M 
Sbjct: 14  YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 73

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +V TF ++I  L +  +  E   +   M + G+ PN V +N +I   C+ G   
Sbjct: 74  QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 133

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL+LF +M +     + P +VT+N I    CK G +E AE I   M+  G+  +   + 
Sbjct: 134 QALRLFDEMVL---KKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFN 190

Query: 329 TLIDGY-ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD------------- 374
           T++     R    E  + + +EMV RG+ PN+ +  + +  L   G              
Sbjct: 191 TVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLN 250

Query: 375 ----VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
               ++ A  V+  M++K I  D  TY+I+ +G C++  +++A KLH  +       D +
Sbjct: 251 KGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLF 310

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           ++N L++  C    +     LL  M   GL PDI++YGT+IDG+CK  +I  A +    +
Sbjct: 311 TFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL 370

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKI 549
                KPN+ IYN++I G  ++  +  A   ++  +  G+    +TY +L+      G +
Sbjct: 371 MDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLV 430

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            EA  +FS+ R   + +  +GY I+I   CK G   +A    + M   GI P+ +TYTTL
Sbjct: 431 EEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTL 490

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +  +SK+ + EE  +L D+MV SGV PDN TY  +I+
Sbjct: 491 MYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIA 527



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 202/415 (48%), Gaps = 22/415 (5%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N   +  +I   C+ G ++     F  +  +    + P  VT+N +++  CK GRVE A 
Sbjct: 10  NEYSYTAMIKALCKAGKVDAG---FEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            ++  M + G+  +V T+  LI+G ARG    E   +  EM + G+ PN V+YN  I W 
Sbjct: 67  RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +G    AL +  +M+ K + P   TY+++ K LC+ G +++A ++   +L   M    
Sbjct: 127 CRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHC 186

Query: 430 YSYNILINYLC-KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY- 487
             +N ++ +L  ++  L +   + + M+ RG+ P+       +   CKGG  + AV ++ 
Sbjct: 187 GLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWF 246

Query: 488 ------ENMKKVEK----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
                 + MK+  K          + + + YN +I G CKD+ ++ A  L     R G  
Sbjct: 247 KTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  T+NTL++ Y   GK+ E F +  +M+  G+  + V Y  +I+  CK    ++A+E 
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEY 366

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +  ++  G+ P+   Y  L+  + +N      I+  + M  +G+ P N TY +++
Sbjct: 367 LTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 421



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 177/382 (46%), Gaps = 21/382 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV-KLNEIGRFW 201
           K T   ++ + +A  + G  E A  +++ +   G +V    +N  ++ L+ +   +    
Sbjct: 148 KPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVV 207

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR-----------------MLK 244
            +  EMV+ G   N       +  LCK  K +EA+ ++++                 ML 
Sbjct: 208 SITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLN 267

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            GI  + + +N++I   C+   +E A+KL    G M+     P+  T N +++ +C LG+
Sbjct: 268 KGIELDSITYNIMIRGCCKDSKMEEAIKLH---GDMTRRGFKPDLFTFNTLLHAYCNLGK 324

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +E    +   M   G+  ++ +Y T+IDG+ +     +A     E++ RGL PN  +YN+
Sbjct: 325 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 384

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I      GD+ GA+  +  M    I P + TY  L   +C  G V++A  + +Q  E +
Sbjct: 385 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 444

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +      Y I+I   CK   +  A      M  RG+ P+ +TY TL+  Y K GN E A 
Sbjct: 445 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 504

Query: 485 QVYENMKKVEKKPNLVIYNSII 506
           ++++ M      P+ + Y ++I
Sbjct: 505 KLFDEMVGSGVIPDNITYGTLI 526



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 148/312 (47%), Gaps = 19/312 (6%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           R +  N   Y + I  L   G V+    +L+++    + P   TY++L   LC++G V++
Sbjct: 5   RNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEE 64

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF+L  ++ +  M     ++ ILIN L +         +L  M   G+ P+ + Y  LI 
Sbjct: 65  AFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIG 124

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
            +C+ G+   A+++++ M   + KP  V YN I   LCK+  ++ A+ +L+    IG+ +
Sbjct: 125 WHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184

Query: 532 DAITYNTLINGYFINGKIAEA-FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA--- 587
               +NT++       +  E+  ++ +EM   G+  N       +  LCK G +Q+A   
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGI 244

Query: 588 -----------RELMKV---MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
                      +E  KV   M+  GI  D +TY  ++    K+   EE I+LH DM   G
Sbjct: 245 WFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRG 304

Query: 634 VSPDNQTYNAII 645
             PD  T+N ++
Sbjct: 305 FKPDLFTFNTLL 316



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 1/185 (0%)

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           +Y  +I   CK G ++   ++   + +   +P +V YN +++ LCK   ++ A  L    
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 526 QRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           ++ G+  ++ T+  LING     +  E   +  EM  +G++ N+V YN LI + C+ G  
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            QA  L   M+L  + P  VTY  +     K    E    + +DM+  G++     +N +
Sbjct: 133 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 192

Query: 645 ISPLL 649
           ++ LL
Sbjct: 193 VAWLL 197



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 1/155 (0%)

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y ++I  LCK   +DA   +L    R GL   + TYN L++    +G++ EAF +   M 
Sbjct: 14  YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 73

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  + V + ILIN L +   + +   +++ M   G+ P+ V Y  L+    +     
Sbjct: 74  QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 133

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           + + L D+MVL  + P   TYN I   L  E   E
Sbjct: 134 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEME 168



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 3/99 (3%)

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           E RNV  A+N+  Y  +I  LCK G      E++  +   G+ P  VTY  L+    K+ 
Sbjct: 3   ESRNV--ALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLL-GEKSAE 655
             EE   L   M   G++P   T+  +I+ L  GE+  E
Sbjct: 61  RVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGE 99



 Score = 40.0 bits (92), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 5/139 (3%)

Query: 132 LEGLLDSYEICKA-----TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           + G +D+ E  K+     T   + +L+      G  E A  +  + +     + +  +  
Sbjct: 395 ISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTI 454

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    KL ++      ++EM S G   N  T+  ++YA  K    EEA  L+  M+ SG
Sbjct: 455 MIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 514

Query: 247 IWPNVVCFNMIINEACQVG 265
           + P+ + +  +I    + G
Sbjct: 515 VIPDNITYGTLIARCSEKG 533


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 162/540 (30%), Positives = 263/540 (48%), Gaps = 38/540 (7%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +VRAC + G  E A +  ++ K +G  +   A++  +  + K        +L +EM   G
Sbjct: 226 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 285

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +V +  TF  VI A   +  + EAL L   M+  G   N+V    ++   C  G+L+ AL
Sbjct: 286 WVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSAL 345

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI----------- 320
            LF K+   + D + PN VT++ +I G C  G +E A E+   M   GI           
Sbjct: 346 NLFNKI---TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 402

Query: 321 --------------------DC---NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
                               DC   N+ TY  ++    +GG  +EA  L D MV +G++P
Sbjct: 403 RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 462

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V YN  I     +G+++ A  V SDM+ + + P+  TYSIL  G  + G  ++A  L 
Sbjct: 463 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 522

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +Q+L  ++    +++N +IN LCK   ++ A+  L + +  G IP  +TY +++DG+ K 
Sbjct: 523 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 582

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           GNI+ A+ VY  M +    PN+V Y S+ING CK   +D A       +  GL LD   Y
Sbjct: 583 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 642

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + LI+G+     +  A  +F E+  VG++ N++ YN +I+        + A    K MI 
Sbjct: 643 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 702

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             I  D  TYTTL+    K        +L+ +M+  G+ PD  T++ +++ L  +   E+
Sbjct: 703 DRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLEN 762



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 163/640 (25%), Positives = 293/640 (45%), Gaps = 49/640 (7%)

Query: 49  KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV-NW 107
           +I ++  P   N +++ ++      P+ AL ++        F   +++ C ++H+L+ + 
Sbjct: 50  QIHQETTPLSQNHVIDALLCHV-NDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSP 108

Query: 108 RRFDDALLLMGNLMSANS-VSPLEFLEGLLD-----SYEICKATPAVFDALVRACTQIGA 161
                A  L+   +S +S  SP+ F++ L++      +E+      VF+ L+ A  +   
Sbjct: 109 ETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFEL---DHRVFNYLLNAYIRANR 165

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            E A D    +  +     +   N  L+ LV+ N IG    LY +MV  G   +  T ++
Sbjct: 166 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 225

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           ++ A  KE ++EEA   +    + G+  +   +++II   C+  +    L+L  +   M 
Sbjct: 226 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE---MK 282

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
               +P+  T   +I      G +  A  ++  MI  G   N+    +L+ GY   G+ +
Sbjct: 283 ERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLD 342

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP--------- 392
            AL L +++ + GL PN V Y+  I      G++E A  + + M    I P         
Sbjct: 343 SALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 402

Query: 393 -------------------------DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                                    + FTY+I+   LC+ G + +A  L + ++ + MV 
Sbjct: 403 RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 462

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  SYN +I   C+  N+  A  + S M+ R L P+++TY  LIDG  K G+ E A+ ++
Sbjct: 463 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 522

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFIN 546
           + M  +   P    +N+IINGLCK   +  A+  L+     G + + +TYN++++G+   
Sbjct: 523 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 582

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G I  A A++ EM   G++ N V Y  LIN  CK      A +    M   G+  D   Y
Sbjct: 583 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 642

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + L+  F K    E   +L  +++  G+SP+   YN++IS
Sbjct: 643 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 682



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 214/465 (46%), Gaps = 69/465 (14%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+  C   G  E A ++  ++K+ G   S+   N+ L   +K        KL+ E 
Sbjct: 362 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 421

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V CG V N+ T+N+++  LCK  K++EA SL   M+  G+ PNVV +N +I   C+ G++
Sbjct: 422 VDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 480

Query: 268 EFALKLFRKM------------------GVMSGDS--------------VLPNSVTHNCI 295
           + A  +F  M                      GDS              + P   T N I
Sbjct: 481 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 540

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ING CK+G++  A +     ++ G   +  TY +++DG+ + G+ + AL +  EM + G+
Sbjct: 541 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 600

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN V Y S I+       ++ AL    +M +K +  D   YS L  G C+   ++ A  
Sbjct: 601 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 660

Query: 416 LHNQVLE------------------------------EHMVGDAY-----SYNILINYLC 440
           L  ++LE                              + M+ D       +Y  LI+ L 
Sbjct: 661 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 720

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   L  A  L   M+ +G++PDIIT+  L++G C  G +E A ++ E M +    P+++
Sbjct: 721 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 780

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYF 544
           IYN++I G  ++ +L  A +L       GL+ D +TY+ LING F
Sbjct: 781 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKF 825



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 230/477 (48%), Gaps = 45/477 (9%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV---HLLVNW 107
           L  + PS+ N  VN ++  + K+P        W   +  F  +++   A +   +++++W
Sbjct: 388 LNGIPPSVFN--VNSLLRGYLKAP-------LWEEASKLFDEAVDCGVANIFTYNIMMSW 438

Query: 108 ----RRFDDALLLMGNL----MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
                + D+A  L+ N+    M  N VS  + + G      +  A+    D L R     
Sbjct: 439 LCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLAR----- 493

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                       LK    + SI    NF     K  +  +   L+ +M+S        TF
Sbjct: 494 -----------DLKPNVVTYSILIDGNF-----KKGDSEKALDLFDQMLSLNIAPTDFTF 537

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I  LCK  ++ EA       L+ G  P+ + +N I++   + G+++ AL ++R+M  
Sbjct: 538 NTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE 597

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                V PN VT+  +INGFCK  R++ A + R  M + G++ +V  Y+ LIDG+ +   
Sbjct: 598 FG---VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRD 654

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            E A  L  E+++ GL PN +VYNS I       ++E AL     MI+  I  D  TY+ 
Sbjct: 655 MESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTT 714

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GL + G +  A  L+ ++L + +V D  ++++L+N LC    L  A+++L  M  + 
Sbjct: 715 LIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKN 774

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-DASL 515
           + P ++ Y TLI GY + GN++ A  +++ M      P+ V Y+ +ING  K D SL
Sbjct: 775 MTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 831


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/430 (32%), Positives = 228/430 (53%), Gaps = 4/430 (0%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ K++EA+ ++ RM      P+V+ +N I+N   + G  + A K+F +M       ++P
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM---KNVGIVP 144

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T    I  FC+  R   A  +   M+  G   N   Y T++ G+       EA  L 
Sbjct: 145 DVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF 204

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           ++M++ G+ P+   +N  +H L  +G+V+ +  +L+ ++ K +C + FT++I  +GLCR 
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +  A  + + V+ E +  D  +YN LI  LCK++N+  A++ L  ++  GL PD  TY
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTY 324

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDGYCK G ++ A ++ +        P+   Y S+INGLC++  +D A +L  A+  
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384

Query: 528 IGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL    I YN LI G    G I +A  M +EM   G + +   YN++IN LCK GC   
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  LM   I  G +PD  T+ TL+  + K    E  I++ + M   GV+PD  TYN++++
Sbjct: 445 ANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLN 504

Query: 647 PLLGEKSAED 656
            L      ED
Sbjct: 505 GLSKAVKNED 514



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 171/650 (26%), Positives = 308/650 (47%), Gaps = 62/650 (9%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVH----------- 102
           M+ SL    V  V+ + +K P  ALE +  V   + F HSL +   I+            
Sbjct: 1   MSASLLPKHVAAVLKQ-QKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAM 59

Query: 103 --LLVNWRRFDDALLLMGNLMSA-NSVSPLEFLEGLLDSYEI-----CKATPAVFDALVR 154
             +L   R   D  LL G  + A  S      ++  +D +E      C+ +   ++A++ 
Sbjct: 60  ENVLAETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMN 119

Query: 155 ACTQIGATEGAYDVIQKLKVKG---------------------HSVSIHAWNNFLSHLVK 193
              + G  + A+ V  ++K  G                     HS ++   NN +S   +
Sbjct: 120 ILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHS-ALRLLNNMVSQGCQ 178

Query: 194 LNEIG---------------RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           LN +                  ++L+ +M+  G   +V+TFN +++ LCK+ +++E+  L
Sbjct: 179 LNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERL 238

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             ++LK G+  N+  FN+ I   C+ G L  A+ +   +     + + P+ VT+N +I G
Sbjct: 239 LNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV---IREGLTPDVVTYNTLICG 295

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK   V  AE+  + ++  G++ +  TY TLIDGY + G  + A ++    + +G +P+
Sbjct: 296 LCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPD 355

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
              Y S I+ L    +++ AL + +  + K + P    Y++L KGLC+ G + QA ++ N
Sbjct: 356 EFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMN 415

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ E     D ++YN++IN LCK   ++ A  L++  I +G +PD+ T+ TLIDGYCK  
Sbjct: 416 EMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQL 475

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLLDAITYN 537
            +E  +Q+   M      P+++ YNS++NGL K   + D  ++     ++  + + ITYN
Sbjct: 476 KMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYN 535

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-IL 596
            L       GK+ EA  +  E+ N GI  + V +  +I+     G  + A +L + M   
Sbjct: 536 ILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +     TY  ++  F++        +L  +M   G +PD  TY  +I 
Sbjct: 596 YKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMID 645



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 224/512 (43%), Gaps = 75/512 (14%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           AY++   +   G    +  +N  L  L K  E+    +L  +++  G   N+ TFN+ I 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC++  L  A+S+   +++ G+ P+VV +N +I   C+  ++  A K   K+       
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL---VNGG 316

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P+  T+N +I+G+CK+G ++ AE+I    I  G   +  TY +LI+G  +    + AL
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM------------------- 385
            L +  + +GL P  ++YN  I  L  EG +  AL ++++M                   
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436

Query: 386 ----------------IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--------- 420
                           I K   PD FT++ L  G C+   ++   ++ N++         
Sbjct: 437 CKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDV 496

Query: 421 --------------------------LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
                                     +E+  V +  +YNIL   LCK+  +  A  L+  
Sbjct: 497 ITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDE 556

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDA 513
           ++ +G+ PD +++ T+I G+   G+++GA Q++  M +  K       YN +IN   +  
Sbjct: 557 ILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKL 616

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            L   + L       G   D  TY  +I+G+ I G     +    EM   G   +   + 
Sbjct: 617 DLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFG 676

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            +IN LC      +A +++  M+ +GI+P+ V
Sbjct: 677 RVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 184/364 (50%), Gaps = 4/364 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    ++G  + A  ++Q    KG       + + ++ L + +EI R   L+   
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G    V  +N++I  LC+E  + +AL +   M ++G   ++  +N++IN  C++G +
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCV 442

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L   M        +P+  T N +I+G+CK  ++E   +I   M   G+  +V TY
Sbjct: 443 SDANNL---MNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITY 499

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            ++++G ++   +E+ +   + MV++G +PN + YN     L   G V  AL ++ ++++
Sbjct: 500 NSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILN 559

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY-SYNILINYLCKSNNLA 446
           K I PD  +++ +  G   NG +K A++L  ++ E++ V     +YNI+IN   +  +L 
Sbjct: 560 KGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLH 619

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             ++L   M   G  PD  TY  +IDG+C  GN +   +    M +    P+L  +  +I
Sbjct: 620 MGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVI 679

Query: 507 NGLC 510
           N LC
Sbjct: 680 NCLC 683



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 157/324 (48%), Gaps = 4/324 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T  +++ L++   Q G    A  ++ ++   G S  I  +N  ++ L K+  +     
Sbjct: 388 KPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANN 447

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  + ++ GYV +V TFN +I   CK+ K+E  + +  +M   G+ P+V+ +N ++N   
Sbjct: 448 LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLS 507

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +    E  ++ F  M V  G   +PN +T+N +    CK G+V  A ++   ++  GI  
Sbjct: 508 KAVKNEDLMETFETM-VEKG--CVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITP 564

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFV 381
           +  ++AT+I G+A  G  + A +L   M ++  +      YN  I+    + D+     +
Sbjct: 565 DTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKL 624

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M      PD +TY ++  G C  G     +K   +++E+  +    ++  +IN LC 
Sbjct: 625 FLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCV 684

Query: 442 SNNLAAAKQLLSSMIVRGLIPDII 465
            + +  A  ++  M+  G++P+++
Sbjct: 685 QHRVHEAVDIIHFMVHNGIVPEVV 708


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 162/540 (30%), Positives = 263/540 (48%), Gaps = 38/540 (7%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +VRAC + G  E A +  ++ K +G  +   A++  +  + K        +L +EM   G
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 325

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +V +  TF  VI A   +  + EAL L   M+  G   N+V    ++   C  G+L+ AL
Sbjct: 326 WVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSAL 385

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI----------- 320
            LF K+   + D + PN VT++ +I G C  G +E A E+   M   GI           
Sbjct: 386 NLFNKI---TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 442

Query: 321 --------------------DC---NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
                               DC   N+ TY  ++    +GG  +EA  L D MV +G++P
Sbjct: 443 RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 502

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V YN  I     +G+++ A  V SDM+ + + P+  TYSIL  G  + G  ++A  L 
Sbjct: 503 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 562

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +Q+L  ++    +++N +IN LCK   ++ A+  L + +  G IP  +TY +++DG+ K 
Sbjct: 563 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 622

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           GNI+ A+ VY  M +    PN+V Y S+ING CK   +D A       +  GL LD   Y
Sbjct: 623 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 682

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + LI+G+     +  A  +F E+  VG++ N++ YN +I+        + A    K MI 
Sbjct: 683 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 742

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             I  D  TYTTL+    K        +L+ +M+  G+ PD  T++ +++ L  +   E+
Sbjct: 743 DRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLEN 802



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 163/640 (25%), Positives = 293/640 (45%), Gaps = 49/640 (7%)

Query: 49  KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV-NW 107
           +I ++  P   N +++ ++      P+ AL ++        F   +++ C ++H+L+ + 
Sbjct: 90  QIHQETTPLSQNHVIDALLCHV-NDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSP 148

Query: 108 RRFDDALLLMGNLMSANS-VSPLEFLEGLLD-----SYEICKATPAVFDALVRACTQIGA 161
                A  L+   +S +S  SP+ F++ L++      +E+      VF+ L+ A  +   
Sbjct: 149 ETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFEL---DHRVFNYLLNAYIRANR 205

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            E A D    +  +     +   N  L+ LV+ N IG    LY +MV  G   +  T ++
Sbjct: 206 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 265

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           ++ A  KE ++EEA   +    + G+  +   +++II   C+  +    L+L  +   M 
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEE---MK 322

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
               +P+  T   +I      G +  A  ++  MI  G   N+    +L+ GY   G+ +
Sbjct: 323 ERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLD 382

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP--------- 392
            AL L +++ + GL PN V Y+  I      G++E A  + + M    I P         
Sbjct: 383 SALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLL 442

Query: 393 -------------------------DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                                    + FTY+I+   LC+ G + +A  L + ++ + MV 
Sbjct: 443 RGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP 502

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  SYN +I   C+  N+  A  + S M+ R L P+++TY  LIDG  K G+ E A+ ++
Sbjct: 503 NVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLF 562

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFIN 546
           + M  +   P    +N+IINGLCK   +  A+  L+     G + + +TYN++++G+   
Sbjct: 563 DQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKE 622

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G I  A A++ EM   G++ N V Y  LIN  CK      A +    M   G+  D   Y
Sbjct: 623 GNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 682

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + L+  F K    E   +L  +++  G+SP+   YN++IS
Sbjct: 683 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 722



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 214/465 (46%), Gaps = 69/465 (14%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+  C   G  E A ++  ++K+ G   S+   N+ L   +K        KL+ E 
Sbjct: 402 TYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEA 461

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V CG V N+ T+N+++  LCK  K++EA SL   M+  G+ PNVV +N +I   C+ G++
Sbjct: 462 VDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNM 520

Query: 268 EFALKLFRKM------------------GVMSGDS--------------VLPNSVTHNCI 295
           + A  +F  M                      GDS              + P   T N I
Sbjct: 521 DMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTI 580

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ING CK+G++  A +     ++ G   +  TY +++DG+ + G+ + AL +  EM + G+
Sbjct: 581 INGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGV 640

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN V Y S I+       ++ AL    +M +K +  D   YS L  G C+   ++ A  
Sbjct: 641 SPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 700

Query: 416 LHNQVLE------------------------------EHMVGDAY-----SYNILINYLC 440
           L  ++LE                              + M+ D       +Y  LI+ L 
Sbjct: 701 LFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   L  A  L   M+ +G++PDIIT+  L++G C  G +E A ++ E M +    P+++
Sbjct: 761 KEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVL 820

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYF 544
           IYN++I G  ++ +L  A +L       GL+ D +TY+ LING F
Sbjct: 821 IYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKF 865



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 171/314 (54%), Gaps = 4/314 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +M+S        TFN +I  LCK  ++ EA       L+ G  P+ + +N I++   
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 620

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+++ AL ++R+M       V PN VT+  +INGFCK  R++ A + R  M + G++ 
Sbjct: 621 KEGNIDSALAVYREMCEFG---VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLEL 677

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V  Y+ LIDG+ +    E A  L  E+++ GL PN +VYNS I       ++E AL   
Sbjct: 678 DVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWY 737

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             MI+  I  D  TY+ L  GL + G +  A  L+ ++L + +V D  ++++L+N LC  
Sbjct: 738 KKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNK 797

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  A+++L  M  + + P ++ Y TLI GY + GN++ A  +++ M      P+ V Y
Sbjct: 798 GQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTY 857

Query: 503 NSIINGLCK-DASL 515
           + +ING  K D SL
Sbjct: 858 DILINGKFKGDRSL 871


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 167/517 (32%), Positives = 254/517 (49%), Gaps = 40/517 (7%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A DV   L  KG   S+   N  LS LVK NE  +  ++++ M S G   +V +F  VI 
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVIN 228

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           ALCK  K+E A+ L+ +M K GI PNVV +N IIN  CQ G L+ A +L  KM V     
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTV---KG 285

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V PN  T+  +ING  KL   +    I   MI AG + NV  +  LIDGY + G+ E AL
Sbjct: 286 VQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345

Query: 345 RLCDEMVKRGLMPNNV-VYN----------------------------------STIHWL 369
           ++ D M+ + + P +V +Y+                                  S +HWL
Sbjct: 346 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 405

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +     A      M+ ++  P     ++L  GLC++G   +A +L  ++LE+      
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 465

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            + N LI+ LC +  L  A +++  M+ RGL  D ITY  LI G+C  G +EG  ++ E 
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGK 548
           M K   +P++  YN ++ GLC    LD A  L    +  GL+  I TY  ++ GY    +
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I +   +F+E+ +  + +N + YNI+I   C+ G    A +L++ M   GI+P+  TY++
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           L+         E+   L D+M   G  P+   Y A+I
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 682



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 254/532 (47%), Gaps = 35/532 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++    Q G  + A+++ +K+ VKG   ++  +   ++ L+KLN   +   +  EM
Sbjct: 257 TYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEM 316

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G+  NV  FN +I   CK   +E AL +   M+   I P  V    ++   C+   +
Sbjct: 317 IGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQI 376

Query: 268 EFALKLFRKMGVMSGDSVLPN---SVTH------------------------------NC 294
           E A     ++ + SG S+ P+   SV H                                
Sbjct: 377 EHAENALEEI-LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTM 435

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++ G CK G+   A E+ + +++ G   +  T   LI G    G   EA R+  EM++RG
Sbjct: 436 LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERG 495

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L  + + YN+ I     EG VEG   +  +M  + I PD +TY+ L +GLC  G +  A 
Sbjct: 496 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 555

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           KL ++     ++ + ++Y I++   CK+N +   + L + ++ + +  + I Y  +I  +
Sbjct: 556 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           C+ GN+  A+Q+ ENMK     PN   Y+S+I+G+C    ++ AK L+   ++ G + + 
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + Y  LI GY   G++  A + + EM +  I  NK  Y ++I+  CK G  ++A  L+  
Sbjct: 676 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 735

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           M   GI+PD VTY  L   F K    +   ++ D M   G+  D  TY  ++
Sbjct: 736 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 170/327 (51%), Gaps = 4/327 (1%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T N +I+ LC   KL EA  +   ML+ G+  + + +N +I   C  G +E   +L  +M
Sbjct: 467 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
              +   + P+  T+N ++ G C +G+++ A ++      +G+  N+ TY  +++GY + 
Sbjct: 527 ---TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKA 583

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              E+   L +E++ + +  N++VYN  I      G+V  AL +L +M  K I P+  TY
Sbjct: 584 NRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY 643

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           S L  G+C  G V+ A  L +++ +E  V +   Y  LI   CK   +  A+     MI 
Sbjct: 644 SSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 703

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
             + P+  TY  +IDGYCK GN+E A  +   MK+    P++V YN + NG CK   +D 
Sbjct: 704 FNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDN 763

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGY 543
           A  +       GL +D ITY TL++G+
Sbjct: 764 AFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 196/410 (47%), Gaps = 20/410 (4%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           ++VH L    R+  A      ++S N   P + L  +L    +C         L +    
Sbjct: 400 SVVHWLCKKFRYHSAFRFTKMMLSRN-FRPSDLLLTML----VC--------GLCKDGKH 446

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           + ATE  + +++K    G   S    N  +  L    ++    ++ KEM+  G   +  T
Sbjct: 447 LEATELWFRLLEK----GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT 502

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I   C E K+E    L   M K GI P++  +N ++   C VG L+ A+KL+ +  
Sbjct: 503 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEF- 561

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 ++ N  T+  ++ G+CK  R+E  E +   ++   ++ N   Y  +I  + + G
Sbjct: 562 --KASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNG 619

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +   AL+L + M  +G++PN   Y+S IH +   G VE A  ++ +M  +   P+   Y+
Sbjct: 620 NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYT 679

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C+ G +  A     +++  ++  + ++Y ++I+  CK  N+  A  LL  M   
Sbjct: 680 ALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKES 739

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           G++PD++TY  L +G+CK  +++ A +V + M       + + Y ++++G
Sbjct: 740 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 166/390 (42%), Gaps = 43/390 (11%)

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE---EALRLCDEMVKRGLMPNNVVYNS 364
           A ++ Y + + G   +++T    +    +    E   E  R+  E    G  P+   + +
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE----GACPDVFSFTN 225

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I+ L   G +E A+ +   M    I P+  TY+ +  GLC+NG +  AF+L  ++  + 
Sbjct: 226 VINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKG 285

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  +  +Y  LIN L K N       +L  MI  G  P+++ +  LIDGYCK GNIEGA+
Sbjct: 286 VQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGAL 345

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-------------- 530
           ++ + M      P  V   S++ G CK   ++ A++ L+     GL              
Sbjct: 346 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 405

Query: 531 ----------------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
                                    +    L+ G   +GK  EA  ++  +   G   +K
Sbjct: 406 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASK 465

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V  N LI+ LC  G   +A  ++K M+  G+  D +TY  L+  F      E    L ++
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           M   G+ PD  TYN ++  L      +D +
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 555


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 276/560 (49%), Gaps = 7/560 (1%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA 147
           N F HS+ES C + H+L   R + DA  ++  ++   S +  +  + L  +  +C     
Sbjct: 4   NGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL--SKADCDVFDVLWSTRNVCVPGFG 61

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VFDAL      +G  E A     K+K         + N  L    KL +     + +K+M
Sbjct: 62  VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G    V T+N++I  +CKE  +E A  L+  M   G+ P+ V +N +I+   +VG L
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 181

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  +  F +M  M  +   P+ +T+N +IN FCK G++    E    M   G+  NV +Y
Sbjct: 182 DDTVCFFEEMKDMCCE---PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 238

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +TL+D + + G  ++A++   +M + GL+PN   Y S I      G++  A  + ++M+ 
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  +  TY+ L  GLC    +K+A +L  ++    ++ +  SYN LI+   K+ N+  
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL+ +  RG+ PD++ YGT I G C    IE A  V   MK+   K N +IY ++++
Sbjct: 359 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 418

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN-VGIA 565
              K  +      LL   + + + +  +T+  LI+G   N  +++A   F+ + N  G+ 
Sbjct: 419 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 478

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   +  +I+ LCK    + A  L + M+  G++PD   YT+L+    K  +  E + L
Sbjct: 479 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 538

Query: 626 HDDMVLSGVSPDNQTYNAII 645
            D M   G+  D   Y +++
Sbjct: 539 RDKMAEIGMKLDLLAYTSLV 558



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 204/433 (47%), Gaps = 41/433 (9%)

Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +E   GL +  +     P    +++++    ++G  +      +++K       +  +N 
Sbjct: 146 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 205

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            ++   K  ++    + Y+EM   G   NV +++ ++ A CKE  +++A+  Y  M + G
Sbjct: 206 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 265

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PN   +  +I+  C++G+L  A +L  +M  +    V  N VT+  +I+G C   R++
Sbjct: 266 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG---VEWNVVTYTALIDGLCDAERMK 322

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP--------- 357
            AEE+   M  AG+  N+ +Y  LI G+ +  + + AL L +E+  RG+ P         
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 382

Query: 358 --------------------------NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                                     N+++Y + +   F  G+    L +L +M +  I 
Sbjct: 383 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 442

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQ 450
               T+ +L  GLC+N  V +A    N++  +  +  +A  +  +I+ LCK N + AA  
Sbjct: 443 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 502

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M+ +GL+PD   Y +L+DG  K GN+  A+ + + M ++  K +L+ Y S++ GL 
Sbjct: 503 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 562

Query: 511 KDASLDAAKSLLQ 523
               L  A+S L+
Sbjct: 563 HCNQLQKARSFLE 575



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 1/301 (0%)

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P   V+++    L   G +E A+   S M    + P   + + L     + G      +
Sbjct: 57  VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
               ++        ++YNI+I+ +CK  ++ AA+ L   M  RGL+PD +TY ++IDG+ 
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           K G ++  V  +E MK +  +P+++ YN++IN  CK   L       +  +  GL  + +
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +Y+TL++ +   G + +A   + +MR VG+  N+  Y  LI+  CK G    A  L   M
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  G+  + VTYT L+         +E  EL   M  +GV P+  +YNA+I   +  K+ 
Sbjct: 297 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 356

Query: 655 E 655
           +
Sbjct: 357 D 357



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 2/263 (0%)

Query: 388 KHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +++C P    +  L   L   G +++A +  +++    +     S N L++   K     
Sbjct: 53  RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 112

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             K+    MI  G  P + TY  +ID  CK G++E A  ++E MK     P+ V YNS+I
Sbjct: 113 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 172

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G  K   LD      +  + +    D ITYN LIN +   GK+      + EM+  G+ 
Sbjct: 173 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 232

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V Y+ L++  CK G  QQA +    M   G++P+  TYT+L+    K  +  +   L
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
            ++M+  GV  +  TY A+I  L
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGL 315



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 4/350 (1%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+  L  A  +   E L G +D+  +     A ++AL+    +    + A +++ +LK +
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVI-PNLASYNALIHGFVKAKNMDRALELLNELKGR 369

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G    +  +  F+  L  L +I     +  EM  CG   N   +  ++ A  K     E 
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 429

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L L   M +  I   VV F ++I+  C+   +  A+  F ++    G  +  N+     +
Sbjct: 430 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG--LQANAAIFTAM 487

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK  +VE A  +   M++ G+  +   Y +L+DG  + G+  EAL L D+M + G+
Sbjct: 488 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 547

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             + + Y S +  L     ++ A   L +MI + I PD      + K     GC+ +A +
Sbjct: 548 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 607

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           L + ++ +H +  + + N L N     N +++ +       +  L P ++
Sbjct: 608 LQSYLM-KHQLLTSDNDNALPNIYSDQNLVSSREHEEQETRISNLQPKLL 656


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/552 (29%), Positives = 277/552 (50%), Gaps = 32/552 (5%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           G ++ AN     E LE ++  +  C      +  L++          A  +   +K  G 
Sbjct: 249 GKVIEAN-----ELLEVMV--HRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 301

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEM--------VSCGYVENVNTFNLVIYALCKE 229
                A+   +  L +  +I     L++EM        + C    +V T +++I  LCKE
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC-IRPDVTTSSMLIDILCKE 360

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            K+ EA  L   M++ G   ++V ++ +I   C    +  A  LF  M  +      P++
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLG---CRPDA 417

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMI----KAGIDC--NVRTYATLIDGYARGGSSEEA 343
           +T+  ++ G C+ G +  A ++   M+    + GI C   + +Y+ +IDG  +    +EA
Sbjct: 418 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 477

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             L +EM  +G+MP+ + Y + IH     G  E A  + ++M+D  I PD  T S+L   
Sbjct: 478 RELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDM 537

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+ G V +A KL   V++   + D  +   L+  LC  + ++ A QL   M   G +P+
Sbjct: 538 LCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPN 597

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKK------VEKKPNLVIYNSIINGLCKDASLDA 517
           ++T  TL+ G C+ GNI+ A+++++NM        +  KPN + Y+ II+GLCK    D 
Sbjct: 598 VVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDE 657

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+ L +  + +G++ D I+Y +LI+G+  +GK  +A  +F+EM ++G+  +   +++LI+
Sbjct: 658 ARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 717

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK G   +A EL++VMI  G IP+ VTYTTLV     N    E  +L   M   G  P
Sbjct: 718 MLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLP 777

Query: 637 DNQTYNAIISPL 648
           D  TY  ++  L
Sbjct: 778 DVVTYGTLMKGL 789



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 245/459 (53%), Gaps = 16/459 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK T   +  ++    +    + A ++ +++K +G    + ++   +       +  +  
Sbjct: 454 CKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 513

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM+  G   +V T +++I  LCK+ K+ EA  L   +++ G   +VV    ++   
Sbjct: 514 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA--- 318
           C    +  A +LF KM  +     +PN VT   ++ G C+ G ++ A E+   M+     
Sbjct: 574 CMKHRISKATQLFLKMQKLG---CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 630

Query: 319 -GIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
            GI+C  N  +Y+ +IDG  + G  +EA  L  EM   G++P+ + Y S IH     G  
Sbjct: 631 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 690

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           + A ++ ++M+D  + PD  T+S+L   LC+ G V +A +L   +++   + +  +Y  L
Sbjct: 691 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTL 750

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK--- 492
           +  LC ++ ++ A QL   M   G +PD++TYGTL+ G C+ GNI+ A+++++ M     
Sbjct: 751 VKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTG 810

Query: 493 ---VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
                 KP+++ Y+ II+GLCK    D A+ L +  + +G++ + I+Y +LI+G+  +GK
Sbjct: 811 QYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGK 870

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           + +A  +F+EM + G+ +N V Y+++I+  CK G   +A
Sbjct: 871 LEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 268/565 (47%), Gaps = 58/565 (10%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK T   +  ++    +    + A ++ +++K +G    + ++ + +       +  +  
Sbjct: 161 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAK 220

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM+  G   +V T  ++I   CKE K+ EA  L   M+  G   ++V ++ +I   
Sbjct: 221 CLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI----K 317
           C    +  A +LF  M  +      P+++ +  ++ G C+ G++  A  +   M+    +
Sbjct: 281 CMKHRISEATQLFMSMKKLG---CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQ 337

Query: 318 AGIDC---NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
            GI C   +V T + LID   + G   EA  L + M++RG + + V Y++ I  L  E  
Sbjct: 338 YGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHR 397

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE------HMVGD 428
           +  A ++   M      PD  TY  L KGLC+ G +  A +LH ++L +           
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY+I+I+ LCK      A++L   M  +G++PD+I+Y TLI G+C  G  E A  ++ 
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFING 547
            M  V  +P++   + +I+ LCK   +  A  LL+   QR  +LD +T  TL+ G  +  
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577

Query: 548 KIAEAFAMFSEMRNVG----------------------IAV------------------- 566
           +I++A  +F +M+ +G                      IA+                   
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N + Y+I+I+ LCK G   +AREL K M   G+IPD ++YT+L+  F ++   ++   L 
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 697

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGE 651
           ++MV  GV PD  T++ +I  L  E
Sbjct: 698 NEMVDIGVQPDVTTFSVLIDMLCKE 722



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 250/534 (46%), Gaps = 87/534 (16%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L + M+  G + ++ T++ +I  LC E ++ EA  L+  M K G  P+ + +  ++   
Sbjct: 75  ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 134

Query: 262 CQVGDLEFALKLFRKM-------GV-------------------------------MSGD 283
           CQ G++  AL+L ++M       G+                               M   
Sbjct: 135 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 194

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            ++P+ +++  +I+GFC  G+ E A+ +   M+  GI  +V T   LID + + G   EA
Sbjct: 195 GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             L + MV RG + + V Y++ I  L  +  +  A  +   M      PD   Y  L KG
Sbjct: 255 NELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314

Query: 404 LCRNGCVKQAFKLHNQVLEEH-------MVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           LC+ G +  A  LH ++L +        +  D  + ++LI+ LCK   +  A +LL  MI
Sbjct: 315 LCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMI 374

Query: 457 VRGLI-----------------------------------PDIITYGTLIDGYCKGGNIE 481
            RG I                                   PD ITYGTL+ G C+ GNI 
Sbjct: 375 QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNIN 434

Query: 482 GAVQVYENMKK------VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
            A+Q+++ M        ++ KP L+ Y+ II+GLCKD   D A+ L +  +  G++ D I
Sbjct: 435 IALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVI 494

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +Y TLI+G+ ++GK  +A  +F+EM +VGI  +    ++LI+ LCK G   +A +L++V+
Sbjct: 495 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 554

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           I  G I D VT TTLV          +  +L   M   G  P+  T   ++  L
Sbjct: 555 IQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 608



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/597 (26%), Positives = 280/597 (46%), Gaps = 93/597 (15%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKL-------KVKGHSVSIHAWNNFLSHLVKL 194
           C+     +  L++   Q G    A  + Q++        +K     +   +  +  L K 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
            ++    +L + M+  G + ++ T++ +I  LC E ++ EA  L+  M K G  P+ + +
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGD---SVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             ++   CQ G++  AL+L ++M   +G       P  ++++ II+G CK  R + A E+
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M   GI  +V +Y TLI G+   G  E+A  L +EM+  G+ P+    +  I  L  
Sbjct: 481 FEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCK 540

Query: 372 EGDVEGALFVLSDMID--------------KHIC---------------------PDHFT 396
           +G V  A  +L  +I               K +C                     P+  T
Sbjct: 541 KGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVT 600

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEE------HMVGDAYSYNILINYLCKSNNLAAAKQ 450
            + L KGLC++G +K A +LH  +L +      +   +A SY+I+I+ LCK      A++
Sbjct: 601 CATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARE 660

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M   G+IPD+I+Y +LI G+C+ G  + A  ++  M  +  +P++  ++ +I+ LC
Sbjct: 661 LFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLC 720

Query: 511 KDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG------ 563
           K+  +  A  LL+   QR  + + +TY TL+ G  +N +I+EA  +F +M+ +G      
Sbjct: 721 KEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVV 780

Query: 564 ------------------IAVNK-----------------VGYNILINFLCKFGCYQQAR 588
                             + ++K                 + Y+I+I+ LCK G   +AR
Sbjct: 781 TYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEAR 840

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           EL K M   G+IP+ ++YT+L+  F ++   E+   L ++MV  GV  +  TY+ +I
Sbjct: 841 ELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 897



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 228/451 (50%), Gaps = 23/451 (5%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V T +++I  LCKE K+ EA  L   M++ G   ++V ++ +I   C    +  A  LF
Sbjct: 53  DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 112

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI----KAGIDC--NVRTYA 328
             M  +      P+++T+  ++ G C+ G +  A ++   M+    + GI C   + +Y+
Sbjct: 113 MSMQKLG---CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 169

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +IDG  +    +EA  L  EM  +G+MP+ + Y S IH     G  E A  + ++M+D 
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV 229

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I PD  T  +L    C+ G V +A +L   ++    + D  +Y+ LI  LC  + ++ A
Sbjct: 230 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEA 289

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-------KPNLVI 501
            QL  SM   G  PD I YGTL+ G C+ G I  A+ +++ M            +P++  
Sbjct: 290 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTT 349

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            + +I+ LCK+  +  A  LL+   QR  +LD +TY+TLI G  +  +I+EA  +F  M+
Sbjct: 350 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQ 409

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI----LHGI--IPDYVTYTTLVTRFS 614
            +G   + + Y  L+  LC+ G    A +L + M+     +GI   P  ++Y+ ++    
Sbjct: 410 KLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLC 469

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           K+   +E  EL ++M   G+ PD  +Y  +I
Sbjct: 470 KDRREDEARELFEEMKAQGIMPDVISYTTLI 500



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 242/494 (48%), Gaps = 22/494 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L++   Q G    A  + Q++        I      +S+ + ++ + +  
Sbjct: 413 CRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 472

Query: 202 K------LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           +      L++EM + G + +V ++  +I+  C   K E+A  L+  ML  GI P+V   +
Sbjct: 473 REDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 532

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           ++I+  C+ G +  A KL     V+     + + VT   ++ G C   R+  A ++   M
Sbjct: 533 VLIDMLCKKGKVIEANKLLE---VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKM 589

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR------GLMPNNVVYNSTIHWL 369
            K G   NV T ATL+ G  + G+ + AL L   M+           PN + Y+  I  L
Sbjct: 590 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 649

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G  + A  +  +M    + PD  +Y+ L  G CR+G  K A  L N++++  +  D 
Sbjct: 650 CKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDV 709

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++++LI+ LCK   +  A +LL  MI RG IP+ +TY TL+ G C    I  A Q++  
Sbjct: 710 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 769

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGL---LDAITYNTLING 542
           M+K+   P++V Y +++ GLC+  ++  A    K +L  + + G     D I+Y+ +I+G
Sbjct: 770 MQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDG 829

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +G+  EA  +F EM+ +G+  N + Y  LI+  C+ G  + A+ L   M+  G+  +
Sbjct: 830 LCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 889

Query: 603 YVTYTTLVTRFSKN 616
            VTY+ ++  F K 
Sbjct: 890 AVTYSVMIHGFCKE 903



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 203/429 (47%), Gaps = 24/429 (5%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD--------SVLPNSVTHN 293
           M  +G++P+   FN++IN  C V  +   L      G+M           S+ P+  T +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMA--GIMRRGYIPDIVTYSIRPDVTTSS 58

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I+  CK G+V  A E+   MI+ G   ++ TY+TLI G        EA  L   M K 
Sbjct: 59  MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK------HICPDHFTYSILTKGLCRN 407
           G  P+ + Y + +  L   G++  AL +  +M++          P   +YSI+  GLC++
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 178

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
               +A +L  ++  + M+ D  SY  LI+  C S     AK L + M+  G+ PD+ T 
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
           G LID +CK G +  A ++ E M       ++V Y+++I GLC    +  A  L  + ++
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG-------IAVNKVGYNILINFLC 579
           +G   DAI Y TL+ G    GKI  A  +  EM N         I  +    ++LI+ LC
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC 358

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A EL++VMI  G I D VTY+TL+          E   L   M   G  PD  
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418

Query: 640 TYNAIISPL 648
           TY  ++  L
Sbjct: 419 TYGTLMKGL 427



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 179/388 (46%), Gaps = 54/388 (13%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            +  + D L +    I A +    VIQ+    G  + +      +  L   + I +  +L
Sbjct: 530 TSSVLIDMLCKKGKVIEANKLLEVVIQR----GCILDVVTCTTLVKGLCMKHRISKATQL 585

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS----GI--WPNVVCFNMI 257
           + +M   G + NV T   ++  LC+   ++ AL L+  ML      GI   PN + +++I
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 645

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C+ G  + A +LF++M  +    V+P+ +++  +I+GFC+ G+ + A+ +   M+ 
Sbjct: 646 IDGLCKCGREDEARELFKEMKALG---VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+  +V T++ LID   + G   EA  L + M++RG +PN V Y + +  L     +  
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE------HMVGDAYS 431
           A  +   M      PD  TY  L KGLC+ G +K A +LH ++L +      +   D  S
Sbjct: 763 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVIS 822

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII-------------------------- 465
           Y+I+I+ LCK      A++L   M   G+IP++I                          
Sbjct: 823 YSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMV 882

Query: 466 ---------TYGTLIDGYCKGGNIEGAV 484
                    TY  +I G+CK G I+ A+
Sbjct: 883 DQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 42/310 (13%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDS---YEI-CKATPAVFDALVRACTQIGATEGAYDV 168
           A L+ G   S N    LE  + +L     Y I CK     +  ++    + G  + A ++
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
            +++K  G    + ++ + +    +  +      L+ EMV  G   +V TF+++I  LCK
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721

Query: 229 ECK-----------------------------------LEEALSLYYRMLKSGIWPNVVC 253
           E K                                   + EA  L+ +M K G  P+VV 
Sbjct: 722 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 781

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGD---SVLPNSVTHNCIINGFCKLGRVEFAEE 310
           +  ++   CQ G+++ AL+L +KM   +G    +  P+ ++++ II+G CK GR + A E
Sbjct: 782 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 841

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G+  NV +Y +LI G+ R G  E+A  L +EMV +G+  N V Y+  IH   
Sbjct: 842 LFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFC 901

Query: 371 AEGDVEGALF 380
            EG ++ ALF
Sbjct: 902 KEGQIDKALF 911


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 175/621 (28%), Positives = 297/621 (47%), Gaps = 72/621 (11%)

Query: 75  KLALEFYTWVGENNRFSHSLE--SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           +L L+F+ W      FS SL+  +  +++ LL ++R F +  L++ N M A  + P    
Sbjct: 75  ELGLKFFDW-ASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLEN-MKAQHLKP---- 128

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV--SIHAWNNFLSH 190
                       T   F AL+ A  + G+ + A  +   ++ + H+   +  A N  L+ 
Sbjct: 129 ------------TREAFSALILAYAESGSLDRALQLFHTVR-EMHNCFPTFVASNLLLNG 175

Query: 191 LVKLNEIGRFWKLYKEMVSC----GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
           LVK  ++    +LY +M+      G V +  T ++++  LC   K+EE   L        
Sbjct: 176 LVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKC 235

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P+VV +NMII+  C+ GDL+ A +   ++  M G  VLP   T+  +INGFCK G  E
Sbjct: 236 CVPHVVFYNMIIDGYCKKGDLQCATRALNELK-MKG--VLPTVETYGALINGFCKAGEFE 292

Query: 307 FAEEIRYAMIKAGIDCNVR-----------------------------------TYATLI 331
             +++   M   G++ NV+                                   TY  +I
Sbjct: 293 AVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMI 352

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD---VEGALFVLSDMIDK 388
           +   +GG  EEA  L ++  +RGL+PN   Y   +H    +GD     G LF ++++ +K
Sbjct: 353 NFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEK 412

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  +Y     G+   G +  A  +  +++E+ +  DA  YNIL++ LCK   + A 
Sbjct: 413 ---SDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAM 469

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K LLS M+ R + PD+  + TLIDG+ + G ++ A+++++ + +    P +V YN++I G
Sbjct: 470 KLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKG 529

Query: 509 LCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            CK   +  A S L     +    D  TY+T+I+GY     ++ A  MF +M       N
Sbjct: 530 FCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPN 589

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y  LIN  CK     +A ++   M    ++P+ VTYTTLV  F K   PE    + +
Sbjct: 590 VITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFE 649

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
            M+++G  P++ T++ +I+ L
Sbjct: 650 LMLMNGCLPNDATFHYLINGL 670



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 236/519 (45%), Gaps = 53/519 (10%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++    + G  + A   + +LK+KG   ++  +   ++   K  E     
Sbjct: 236 CVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVD 295

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L  EM + G   NV  FN VI A  K   + EA  +  RM + G  P++  +N++IN +
Sbjct: 296 QLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFS 355

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A +L  K        +LPN  ++  +++ +CK G    A  + + + + G  
Sbjct: 356 CKGGRIEEADELLEKA---KERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEK 412

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ +Y   I G    G  + AL + ++M+++G+ P+  +YN  +  L  +G +     +
Sbjct: 413 SDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLL 472

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           LS+M+D+++ PD + ++ L  G  RNG + +A K+   ++ + +      YN +I   CK
Sbjct: 473 LSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCK 532

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A   L+ M      PD  TY T+IDGY K  ++  A++++  M K + KPN++ 
Sbjct: 533 FGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVIT 592

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y S+ING CK A +  A+ +    +   L+ + +TY TL+ G+F  GK   A ++F  M 
Sbjct: 593 YTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652

Query: 561 NVGIAVNKVGYNILIN-------------------------------------------- 576
             G   N   ++ LIN                                            
Sbjct: 653 MNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAY 712

Query: 577 -----FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
                 LCK G    A+ L+  M+  G + D V +T L+
Sbjct: 713 NSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALL 751



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/555 (23%), Positives = 255/555 (45%), Gaps = 55/555 (9%)

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK 143
           + E  R        C + H+ V +    D     G+L  A        ++G+L + E   
Sbjct: 221 IEEGRRLIKHRWGKCCVPHV-VFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVE--- 276

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
                + AL+    + G  E    ++ ++  +G ++++  +NN +    K   +    ++
Sbjct: 277 ----TYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEM 332

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
            + M   G   ++ T+N++I   CK  ++EEA  L  +  + G+ PN   +  +++  C+
Sbjct: 333 LRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCK 392

Query: 264 VGD-LEFALKLFR--KMG---------------VMSGD--------------SVLPNSVT 291
            GD ++ +  LFR  ++G               V++G+               V P++  
Sbjct: 393 KGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQI 452

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +++G CK GR+   + +   M+   +  +V  +ATLIDG+ R G  +EA+++   ++
Sbjct: 453 YNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVII 512

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++G+ P  V YN+ I      G +  AL  L++M   H  PD +TYS +  G  +   + 
Sbjct: 513 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMS 572

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A K+  Q+++     +  +Y  LIN  CK  ++  A+++ S M    L+P+++TY TL+
Sbjct: 573 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLV 632

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA----------SLDAAKSL 521
            G+ K G  E A  ++E M      PN   ++ +INGL   A          S +  +SL
Sbjct: 633 GGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSL 692

Query: 522 LQASQRIGLLDA-----ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           +     + LLD        YN++I     +G +  A  + ++M   G  ++ V +  L++
Sbjct: 693 ILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLH 752

Query: 577 FLCKFGCYQQARELM 591
            LC  G  ++ R ++
Sbjct: 753 GLCHKGKSKEWRNII 767



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 175/424 (41%), Gaps = 42/424 (9%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +V D E  LK F           L + V H+ ++            E +   M    +  
Sbjct: 70  RVHDAELGLKFFDWASTRPFSCSL-DGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKP 128

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
               ++ LI  YA  GS + AL+L   + +     P  V  N  ++ L   G V+ AL +
Sbjct: 129 TREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQL 188

Query: 382 LSDMIDKH----ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
              M+          D++T SI+ KGLC  G +++  +L      +  V     YN++I+
Sbjct: 189 YDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIID 248

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA-------------- 483
             CK  +L  A + L+ + ++G++P + TYG LI+G+CK G  E                
Sbjct: 249 GYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNM 308

Query: 484 -VQVYENMKKVEKK--------------------PNLVIYNSIINGLCKDASLDAAKSLL 522
            V+V+ N+   E K                    P++  YN +IN  CK   ++ A  LL
Sbjct: 309 NVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELL 368

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           + ++  GLL +  +Y  L++ Y   G   +A  M   +  +G   + V Y   I+ +   
Sbjct: 369 EKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVA 428

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G    A  + + M+  G+ PD   Y  L++   K      +  L  +M+   V PD   +
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVF 488

Query: 642 NAII 645
             +I
Sbjct: 489 ATLI 492



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/395 (22%), Positives = 158/395 (40%), Gaps = 60/395 (15%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + A +      G  + A  V +K+  KG       +N  +S L K   I     L  EM+
Sbjct: 418 YGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEML 477

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG--- 265
                 +V  F  +I    +  +L+EA+ ++  +++ G+ P +V +N +I   C+ G   
Sbjct: 478 DRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 537

Query: 266 --------------------------------DLEFALKLFRKMGVMSGDSVLPNSVTHN 293
                                           D+  ALK+F   G M      PN +T+ 
Sbjct: 538 DALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMF---GQMMKHKFKPNVITYT 594

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +INGFCK   +  AE++   M    +  NV TY TL+ G+ + G  E A  + + M+  
Sbjct: 595 SLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMN 654

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID-----KHICPDHFT------------ 396
           G +PN+    +T H+L           VL +  D     + +  D FT            
Sbjct: 655 GCLPND----ATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIA 710

Query: 397 -YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+ +   LC++G V  A  L  ++L +  + D+  +  L++ LC        + ++S  
Sbjct: 711 AYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCD 770

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           + +  +   + Y   +D Y   G +  A  + + +
Sbjct: 771 LNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTL 805


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 171/584 (29%), Positives = 278/584 (47%), Gaps = 6/584 (1%)

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
           RV++  +  P  AL F+ WV +   F  S  +  AI+ +L        A  +M   +   
Sbjct: 56  RVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVK 115

Query: 125 -SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                L+ L G+       + +  + D L++   +    E    V  K+   G    +  
Sbjct: 116 VDGGVLDVLVGI-GCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRN 174

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
            N  L  L   + +    ++Y  M+ C     + TFN ++ + CKE ++  A+ +   M 
Sbjct: 175 CNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMR 234

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G  PN V +N+++N     G+ + A +L  +M  M G  V  ++ T+N +I GFCK  
Sbjct: 235 MFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMS-MLGLKV--SAHTYNPLIRGFCKKE 291

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             E A ++R  M+  G    V TY T++    R G   +A R  D MV   LMP+ V YN
Sbjct: 292 MFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYN 351

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I+     G+   AL + S++  K++ P   TY+ L  G CR G +  A  + + +++ 
Sbjct: 352 TLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKH 411

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D  ++ IL+   C+  NL  AK+L   M+ RGL PD I Y T I G  K GN   A
Sbjct: 412 GLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKA 471

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
             + E MK     P+L+ YN +INGLCK  + D A  L+Q  +  G++ D +TY ++I+ 
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           + I+G + +A  +FS+M   GI  + V Y +LI+     G    A++    M   G+ P+
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            +TY  L+    K    +    L  +M   GVSP+  TY  +I+
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 262/543 (48%), Gaps = 29/543 (5%)

Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C+  P +  F+ ++ +  + G    A +V+  +++ G   +  ++N  ++ L    E  R
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             +L ++M   G   + +T+N +I   CK+   EEA  L   ML  G  P VV +N I+ 
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C++G +  A    R + VM  + ++P+ V++N +I G+ +LG    A  +   +    
Sbjct: 321 SLCRLGRVSDAR---RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V TY TLIDG  R G+ + A  + D+M+K GL P+ V +   +      G++  A 
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +  +M+ + + PD   Y+    G  + G   +AF +  ++  E    D  +YN+LIN L
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK  N   A +L+  M + G++PD +TY ++I  +   G +  A +V+ +M K    P++
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           V Y  +I+       LD AK      Q  G+  + ITYN LI G      +  A+ +F+E
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G++ NK  Y ILIN       +Q A +L K M+   I PD  T++ L+   SK+  
Sbjct: 618 MESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK 677

Query: 619 ----------PEEVIELHDDMVLSGV-----SPDNQTYNAI--------ISPLLGEKSAE 655
                     P  ++E++   +  G      S +N  + AI        + P LG+  A+
Sbjct: 678 LLAVLRLENLPLAIVEINSTWIAEGFVKLEESKNNSHFRAIHVFEKGGFLEPFLGKLCAK 737

Query: 656 DQV 658
            +V
Sbjct: 738 SRV 740



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 188/444 (42%), Gaps = 76/444 (17%)

Query: 208 VSCGYVENVNT--FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           + CG    V+    +L+I    K+  LE+ L ++Y+M+ +G+ P+V   N +        
Sbjct: 127 IGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRV-------- 178

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
                LKL +       D  + N V                  EE+   MIK  I   + 
Sbjct: 179 -----LKLLK-------DKSMVNEV------------------EEVYSVMIKCQIRPTIV 208

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ T++D   + G    A+ + D M   G  PN+V                         
Sbjct: 209 TFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDV------------------------- 243

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                     +Y++L  GL   G   +A +L  Q+    +   A++YN LI   CK    
Sbjct: 244 ----------SYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMF 293

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   M+ RG +P ++TY T++   C+ G +  A +  + M   +  P+LV YN++
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I G  +  +   A  L    +   L+ ++ TYNTLI+G    G +  A  M  +M   G+
Sbjct: 354 IYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGL 413

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             + V + IL+   C+ G    A+EL   M+  G+ PD + YTT +    K  +P +   
Sbjct: 414 CPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFG 473

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           + ++M   G  PD  TYN +I+ L
Sbjct: 474 MKEEMKAEGFPPDLITYNVLINGL 497


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 264/549 (48%), Gaps = 43/549 (7%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +VFD L+ A  ++G    A  +  +L+ KG S SI  +   ++     +     + L   
Sbjct: 56  SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 207 MVSCGYVENVNTFNLVIYALC-----------------------------------KECK 231
           ++  GY  N+ TFN +I   C                                   K  +
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++ AL L   M KS + PN+V ++ +I+  C+ G +  AL L  ++G      +L ++VT
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG---ERGILLDAVT 232

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I+G C +GR +   ++   M++  +D +  T+  LID   + G   EA  +   M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KRG  P+ V YN+ +    +  +V  A  + + M+ + + PD   Y++L  G C+   V 
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L  ++  +++V    SYN LI+ LC S  ++  K+LL  M      PD++TY  LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           D  CK G I  A+ V   M K   KPN+V YN++++G C   +++ AK +     + GL 
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D + YN LINGY     + EA  +F EMR+  +  +   YN LI+ LC  G     +EL
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL- 649
           +  M   G  PD +TY  L+  F K    ++ I L   +V  G+ PD  T +AI+  L  
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCK 591

Query: 650 GE--KSAED 656
           GE  K AED
Sbjct: 592 GEKLKMAED 600



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 258/511 (50%), Gaps = 13/511 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ ++      G    A D  Q L  +G+      +   ++ L K  +I     L +EM
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N+  ++ +I  LCK+  + +AL L  ++ + GI  + V +N +I+  C VG  
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +   +L  KM     ++V P+  T N +I+  CK GR+  A+ +   M K G   ++ TY
Sbjct: 247 QEVTQLLTKM---VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++GY    +  EA  L + MVKRGL P+ + YN  I        V+ A+ +  ++ +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K++ P   +Y+ L  GLC +G +    KL +++       D  +YNILI+ LCK   +  
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+ +G+ P+I+TY  ++DGYC   N+  A  ++  M K   +P+++ YN +IN
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CK   +D A  L +  +   L+ D  +YN+LI+G    G+I     +  EM + G + 
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + + YNIL++  CK   + +A  L +  I+ GI PD+ T   +V    K     E +++ 
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFR-QIVEGIWPDFYTNHAIVDNLCKG----EKLKMA 598

Query: 627 DD----MVLSGVSPDNQTYNAIISPLLGEKS 653
           +D    +++ G SP+ QTY  +I+ L  + S
Sbjct: 599 EDALKHLLMHGCSPNVQTYTILINALCKDGS 629



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 202/422 (47%), Gaps = 13/422 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA-CTQIGATEGAYDVIQ 170
           DAL   G ++ A  V  +    G        K     ++AL+   C++    E A ++  
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGE-------KPDIVTYNALMEGYCSRENVHE-ARELFN 324

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++  +G    +  +N  +    K   +     L+KE+ +   V  + ++N +I  LC   
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++     L   M  S   P+VV +N++I+  C+ G +  AL +   + +M    V PN V
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV---LVMMMKKGVKPNIV 441

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +++G+C    V  A++I   M+K+G++ ++  Y  LI+GY +    +EA+ L  EM
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
             + L+P+   YNS I  L   G +     +L +M D    PD  TY+IL    C+    
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  L  Q++E  +  D Y+ + +++ LCK   L  A+  L  +++ G  P++ TY  L
Sbjct: 562 DKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTIL 620

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+  CK G+   A+ +   M+  ++ P+ + +  II  L +    D A+ L +     GL
Sbjct: 621 INALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680

Query: 531 LD 532
           ++
Sbjct: 681 VN 682



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 194/426 (45%), Gaps = 39/426 (9%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C+   +++A++ + RM++    P    F+ ++    ++G    A+ LF ++       + 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQL---QSKGIS 87

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+  T   +IN +       FA  +   ++K+G   N+ T+ T+I+G+   G   +AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
           C  ++ +G             +LF                      D FTY  L  GL +
Sbjct: 148 CQNLLAQG-------------YLF----------------------DQFTYGTLINGLSK 172

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           NG +K A  L  ++ +  +  +   Y+ LI+ LCK   ++ A  L S +  RG++ D +T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDAAKSLLQAS 525
           Y +LIDG C  G  +   Q+   M +    P+   +N +I+ LCK+   L+A   L   S
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +R    D +TYN L+ GY     + EA  +F+ M   G+  + + YN+LI+  CK     
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L K +    ++P   +Y +L+     +     V +L D+M  S   PD  TYN +I
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 646 SPLLGE 651
             L  E
Sbjct: 413 DALCKE 418



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 169/338 (50%), Gaps = 3/338 (0%)

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYA--RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           IRYA+ K  I      +    + +   R  + ++A+   + MV+    P   V++  +  
Sbjct: 5   IRYAIPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGA 64

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           +   G    A+ + + +  K I P   T++IL            AF L   +L+     +
Sbjct: 65  IVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPN 124

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             ++N +IN  C +  +  A     +++ +G + D  TYGTLI+G  K G I+ A+ + +
Sbjct: 125 LVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ 184

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFING 547
            M+K   +PNLV+Y+++I+GLCKD  +  A  L  Q  +R  LLDA+TYN+LI+G    G
Sbjct: 185 EMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVG 244

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +  E   + ++M    +  +   +NILI+ LCK G   +A+ ++ +M   G  PD VTY 
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            L+  +    +  E  EL + MV  G+ PD   YN +I
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 149/354 (42%), Gaps = 72/354 (20%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ L+    +    + A  + ++L  K    +I ++N+ +  L     I    KL  EM 
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEAL-------------------------------- 236
                 +V T+N++I ALCKE ++ EAL                                
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVN 457

Query: 237 ---SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
               ++ RM+KSG+ P+++ +N++IN  C+   ++ A+ LF++M      +++P+  ++N
Sbjct: 458 VAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM---RHKNLIPDIASYN 514

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK- 352
            +I+G C LGR+   +E+   M  +G   +V TY  L+D + +    ++A+ L  ++V+ 
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG 574

Query: 353 ---------------------------------RGLMPNNVVYNSTIHWLFAEGDVEGAL 379
                                             G  PN   Y   I+ L  +G    A+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +LS M D    PD  T+ I+   L +     +A KL  +++   +V    S N
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLN 688


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 241/489 (49%), Gaps = 45/489 (9%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V TF  ++  LC+E ++ EA++L  RM+++G+ P+ + +   ++  C++GD   AL L 
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 275 RKM------------------GV---------------MSGDSVLPNSVTHNCIINGFCK 301
           RKM                  G+               M    + PN VT+NC+I GFC 
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A+ +   M++  I  NV TY  LI+ + + G   EA  L DEM+ RG++PN + 
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YNS I     +  ++ A  +   M  K   PD FT++ L  G C    +    +L +++ 
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +V +  +YN LI+  C   +L AA  L   MI  G+ PDI+T  TL+DG C  G ++
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480

Query: 482 GAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
            A+++++ M+K +            +P+++ YN +I GL  +     A+ L +     G+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D ITY+++I+G     ++ EA  MF  M +   + N V +N LIN  CK G      E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M   GI+ D + Y TL+  F K  +    +++  +M+ SGV PD  T   +++   
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660

Query: 650 GEKSAEDQV 658
            ++  E  V
Sbjct: 661 SKEELERAV 669



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 234/487 (48%), Gaps = 29/487 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +   V    ++G T  A ++++K++   H   ++  ++  +  L K         L+ E
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   N+ T+N +I   C   +   A  L   ML+  I PNVV +N +IN   + G 
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A +L+ +M       ++PN++T+N +I+GFCK  R++ AE++ Y M   G   +V T
Sbjct: 339 FFEAAELYDEM---LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + TLIDGY      ++ + L  EM +RGL+ N V YN+ IH     GD+  AL +   MI
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +CPD  T + L  GLC NG +K A ++   + +  M  DA                 
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA----------------- 498

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
                  S    G+ PD++TY  LI G    G    A ++YE M      P+ + Y+S+I
Sbjct: 499 -------SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 507 NGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK + LD A  + +    +    + +T+NTLINGY   G++ +   +F EM   GI 
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + + Y  LI    K G    A ++ + MI  G+ PD +T   ++T F      E  + +
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671

Query: 626 HDDMVLS 632
            +D+ +S
Sbjct: 672 LEDLQMS 678



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 247/504 (49%), Gaps = 20/504 (3%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +I   E A D+   +       S+  +N  +  +V++        LY++M       ++ 
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +F ++I   C   KL  ALS + ++ K G+ P+VV F  +++  C    +  AL LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                    P+ +T   ++NG C+ GRV  A  +   M++ G+  +  TY T +DG  + 
Sbjct: 178 -------CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230

Query: 338 GSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
           G +  AL L  +M +   + PN V+Y++ I  L  +G    +  +  +M DK I P+  T
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ +  G C +G    A +L  ++LE  +  +  +YN LIN   K      A +L   M+
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            RG+IP+ ITY ++IDG+CK   ++ A  ++  M      P++  + ++I+G C    +D
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 410

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
               LL    R GL+ + +TYNTLI+G+ + G +  A  +  +M + G+  + V  N L+
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470

Query: 576 NFLCKFGCYQQARELMKVM-----------ILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           + LC  G  + A E+ K M             +G+ PD +TY  L+          E  E
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           L+++M   G+ PD  TY+++I  L
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGL 554



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 177/362 (48%), Gaps = 16/362 (4%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K +P V  ++AL+ A  + G    A ++  ++  +G   +   +N+ +    K + +   
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             ++  M + G   +V TF  +I   C   ++++ + L + M + G+  N V +N +I+ 
Sbjct: 378 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 437

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-- 318
            C VGDL  AL L ++M + SG  V P+ VT N +++G C  G+++ A E+  AM K+  
Sbjct: 438 FCLVGDLNAALDLSQQM-ISSG--VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 319 ---------GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                    G++ +V TY  LI G    G   EA  L +EM  RG++P+ + Y+S I  L
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +  ++ A  +   M  K   P+  T++ L  G C+ G V    +L  ++    +V DA
Sbjct: 555 CKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADA 614

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             Y  LI    K  N+  A  +   MI  G+ PD IT   ++ G+     +E AV + E+
Sbjct: 615 IIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLED 674

Query: 490 MK 491
           ++
Sbjct: 675 LQ 676


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 249/529 (47%), Gaps = 45/529 (8%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A     KL   G    +  +N  L  L   + +     L+ +M       NV TF  ++ 
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM------- 277
            LC+E ++ EA++L  RM++ G+ P  + +  I++  C+ GD   AL L RKM       
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252

Query: 278 --------------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
                                       M    + P+  T+N +I GFC  GR   AE++
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M++  I  +V TY  LI+ + + G   EA  L DEM+ RG++PN + Y+S I     
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +  ++ A  +   M  K   P+  T++ L  G C    +    +L +++ E  +V D  +
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YN LI+      +L AA  LL  MI  GL PDI+T  TL+DG C  G ++ A+++++ M+
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492

Query: 492 KVEK-----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           K +K           +P++  YN +I+GL  +     A+ L +     G++ D ITY+++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G     ++ EA  MF  M +   + N V +  LIN  CK G      EL   M   GI
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 612

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + + +TY TL+  F K  +    +++  +M+ SGV PD  T   +++ L
Sbjct: 613 VANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 268/536 (50%), Gaps = 24/536 (4%)

Query: 132 LEGLLDSYEI------CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           ++GL D+ ++       +  P+V D   L+    ++   +    + QK++ K     I++
Sbjct: 57  IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +   +      +++      + ++   G   +V TFN +++ LC E ++ EAL+L+++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++   PNVV F  ++N  C+ G +  A+ L  +   M  D + P  +T+  I++G CK G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR---MMEDGLQPTQITYGTIVDGMCKKG 233

Query: 304 RVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
               A  +   M +   I  NV  Y+ +ID   + G   +A  L  EM ++G+ P+   Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS I    + G    A  +L +M+++ I PD  TY+ L     + G   +A +L++++L 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +  +Y+ +I+  CK N L AA+ +   M  +G  P++IT+ TLIDGYC    I+ 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
            +++   M +     +   YN++I+G      L+AA  LLQ     GL  D +T +TL++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 542 GYFINGKIAEAFAMFSEMRNV-----------GIAVNKVGYNILINFLCKFGCYQQAREL 590
           G   NGK+ +A  MF  M+             G+  +   YNILI+ L   G + +A EL
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + M   GI+PD +TY++++    K    +E  ++ D M     SP+  T+  +I+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 5/385 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  LE A+ LF  M        LP+ V    ++    ++ R +    +   M +  I C
Sbjct: 56  EIKGLEDAIDLFSDM---LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ ++  LI  +        AL    ++ K GL P+ V +N+ +H L  E  V  AL + 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +    P+  T++ L  GLCR G + +A  L ++++E+ +     +Y  +++ +CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 443 NNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +A  LL  M  V  +IP+++ Y  +ID  CK G    A  ++  M++    P+L  
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS+I G C       A+ LLQ   +R    D +TYN LIN +   GK  EA  ++ EM 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N + Y+ +I+  CK      A  +  +M   G  P+ +T+ TL+  +      +
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + +EL  +M  +G+  D  TYN +I
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLI 437



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++++      G    A  ++Q++  +  S  +  +N  ++  VK  +     +LY EM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G + N  T++ +I   CK+ +L+ A  ++Y M   G  PN++ FN +I+  C    +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  ++L  +M   +   ++ ++ T+N +I+GF  +G +  A ++   MI +G+  ++ T 
Sbjct: 412 DDGMELLHEM---TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVE 376
            TL+DG    G  ++AL +   M K            G+ P+   YN  I  L  EG   
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +  +M  + I PD  TYS +  GLC+   + +A ++ + +  +    +  ++  LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N  CK+  +    +L   M  RG++ + ITY TLI G+ K GNI GA+ +++ M      
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           P+ +   +++ GL     L  A ++L+  Q
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 2/279 (0%)

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A+ + SDM+     P    +  L   + R         L+ ++  + +  D YS+ I
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI   C  + L  A      +   GL PD++T+ TL+ G C    +  A+ ++  M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAF 553
            +PN+V + +++NGLC++  +  A +LL      GL    ITY T+++G    G    A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 554 AMFSEMRNVG-IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            +  +M  V  I  N V Y+ +I+ LCK G +  A+ L   M   GI PD  TY +++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           F  +    +  +L  +M+   +SPD  TYNA+I+  + E
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 255/539 (47%), Gaps = 48/539 (8%)

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           +C+++      +  I KL   G    +  +N  L  L   + +     L+ +M       
Sbjct: 126 SCSKLPFALSTFGKITKL---GLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV TF  ++  LC+E ++ EA++L  RM++ G+ P  + +  I++  C+ GD   AL L 
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242

Query: 275 RKM---------------------------------GVMSGDSVLPNSVTHNCIINGFCK 301
           RKM                                   M    + P+  T+N +I GFC 
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   AE++   M++  I  +V TY  LI+ + + G   EA  L DEM+ RG++PN + 
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y+S I     +  ++ A  +   M  K   P+  T++ L  G C    +    +L +++ 
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +V D  +YN LI+      +L AA  LL  MI  GL PDI+T  TL+DG C  G ++
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482

Query: 482 GAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
            A+++++ M+K +K           +P++  YN +I+GL  +     A+ L +     G+
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D ITY+++I+G     ++ EA  MF  M +   + N V +  LIN  CK G      E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L   M   GI+ + +TY TL+  F K  +    +++  +M+ SGV PD  T   +++ L
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 268/536 (50%), Gaps = 24/536 (4%)

Query: 132 LEGLLDSYEI------CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           ++GL D+ ++       +  P+V D   L+    ++   +    + QK++ K     I++
Sbjct: 57  IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +   +      +++      + ++   G   +V TFN +++ LC E ++ EAL+L+++M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++   PNVV F  ++N  C+ G +  A+ L  +   M  D + P  +T+  I++G CK G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR---MMEDGLQPTQITYGTIVDGMCKKG 233

Query: 304 RVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
               A  +   M +   I  NV  Y+ +ID   + G   +A  L  EM ++G+ P+   Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS I    + G    A  +L +M+++ I PD  TY+ L     + G   +A +L++++L 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +  +Y+ +I+  CK N L AA+ +   M  +G  P++IT+ TLIDGYC    I+ 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
            +++   M +     +   YN++I+G      L+AA  LLQ     GL  D +T +TL++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 542 GYFINGKIAEAFAMFSEMRNV-----------GIAVNKVGYNILINFLCKFGCYQQAREL 590
           G   NGK+ +A  MF  M+             G+  +   YNILI+ L   G + +A EL
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + M   GI+PD +TY++++    K    +E  ++ D M     SP+  T+  +I+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 185/385 (48%), Gaps = 5/385 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  LE A+ LF  M        LP+ V    ++    ++ R +    +   M +  I C
Sbjct: 56  EIKGLEDAIDLFSDM---LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ ++  LI  +        AL    ++ K GL P+ V +N+ +H L  E  V  AL + 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +    P+  T++ L  GLCR G + +A  L ++++E+ +     +Y  +++ +CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 443 NNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +A  LL  M  V  +IP+++ Y  +ID  CK G    A  ++  M++    P+L  
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS+I G C       A+ LLQ   +R    D +TYN LIN +   GK  EA  ++ EM 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N + Y+ +I+  CK      A  +  +M   G  P+ +T+ TL+  +      +
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + +EL  +M  +G+  D  TYN +I
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLI 437



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++++      G    A  ++Q++  +  S  +  +N  ++  VK  +     +LY EM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G + N  T++ +I   CK+ +L+ A  ++Y M   G  PN++ FN +I+  C    +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  ++L  +M   +   ++ ++ T+N +I+GF  +G +  A ++   MI +G+  ++ T 
Sbjct: 412 DDGMELLHEM---TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVE 376
            TL+DG    G  ++AL +   M K            G+ P+   YN  I  L  EG   
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +  +M  + I PD  TYS +  GLC+   + +A ++ + +  +    +  ++  LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N  CK+  +    +L   M  RG++ + ITY TLI G+ K GNI GA+ +++ M      
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           P+ +   +++ GL     L  A ++L+  Q
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 135/279 (48%), Gaps = 2/279 (0%)

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A+ + SDM+     P    +  L   + R         L+ ++  + +  D YS+ I
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI   C  + L  A      +   GL PD++T+ TL+ G C    +  A+ ++  M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAF 553
            +PN+V + +++NGLC++  +  A +LL      GL    ITY T+++G    G    A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 554 AMFSEMRNVG-IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            +  +M  V  I  N V Y+ +I+ LCK G +  A+ L   M   GI PD  TY +++  
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           F  +    +  +L  +M+   +SPD  TYNA+I+  + E
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKE 338


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 165/549 (30%), Positives = 264/549 (48%), Gaps = 43/549 (7%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +VFD L+ A  ++G    A  +  +L+ KG S SI  +   ++     +     + L   
Sbjct: 56  SVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLAT 115

Query: 207 MVSCGYVENVNTFNLVIYALC-----------------------------------KECK 231
           ++  GY  N+ TFN +I   C                                   K  +
Sbjct: 116 ILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQ 175

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++ AL L   M KS + PN+V ++ +I+  C+ G +  AL L  ++G      +L ++VT
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG---ERGILLDAVT 232

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I+G C +GR +   ++   M++  +D +  T+  LID   + G   EA  +   M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KRG  P+ V YN+ +    +  +V  A  + + M+ + + PD   Y++L  G C+   V 
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L  ++  +++V    SYN LI+ LC S  ++  K+LL  M      PD++TY  LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           D  CK G I  A+ V   M K   KPN+V YN++++G C   +++ AK +     + GL 
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D + YN LINGY     + EA  +F EMR+  +  +   YN LI+ LC  G     +EL
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL- 649
           +  M   G  PD +TY  L+  F K    ++ I L   +V  G+ PD  T +AI+  L  
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCK 591

Query: 650 GE--KSAED 656
           GE  K AED
Sbjct: 592 GEKLKMAED 600



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 258/511 (50%), Gaps = 13/511 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ ++      G    A D  Q L  +G+      +   ++ L K  +I     L +EM
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N+  ++ +I  LCK+  + +AL L  ++ + GI  + V +N +I+  C VG  
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +   +L  KM     ++V P+  T N +I+  CK GR+  A+ +   M K G   ++ TY
Sbjct: 247 QEVTQLLTKM---VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++GY    +  EA  L + MVKRGL P+ + YN  I        V+ A+ +  ++ +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K++ P   +Y+ L  GLC +G +    KL +++       D  +YNILI+ LCK   +  
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+ +G+ P+I+TY  ++DGYC   N+  A  ++  M K   +P+++ YN +IN
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CK   +D A  L +  +   L+ D  +YN+LI+G    G+I     +  EM + G + 
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + + YNIL++  CK   + +A  L +  I+ GI PD+ T   +V    K     E +++ 
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFR-QIVEGIWPDFYTNHAIVDNLCKG----EKLKMA 598

Query: 627 DD----MVLSGVSPDNQTYNAIISPLLGEKS 653
           +D    +++ G SP+ QTY  +I+ L  + S
Sbjct: 599 EDALKHLLMHGCSPNVQTYTILINALCKDGS 629



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 222/455 (48%), Gaps = 7/455 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+  C  +G  +    ++ K+  +      + +N  +  L K   I     +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   ++ T+N ++   C    + EA  L+ RM+K G+ P+V+ +N++I+  C+   +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ LF+++      +++P   ++N +I+G C  GR+   +++   M  +    +V TY
Sbjct: 352 DEAMVLFKEL---CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTY 408

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LID   + G   EAL +   M+K+G+ PN V YN+ +       +V  A  + + M+ 
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD   Y++L  G C+   V +A  L  ++  ++++ D  SYN LI+ LC    +  
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK-PNLVIYNSII 506
            ++LL  M   G  PD+ITY  L+D +CK    + A+ ++  +  VE   P+    ++I+
Sbjct: 529 VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI--VEGIWPDFYTNHAIV 586

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LCK   L  A+  L+     G    + TY  LIN    +G   EA  + S+M +    
Sbjct: 587 DNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRP 646

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            + + + I+I  L +     +A +L + MI  G++
Sbjct: 647 PDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 202/422 (47%), Gaps = 13/422 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA-CTQIGATEGAYDVIQ 170
           DAL   G ++ A  V  +    G        K     ++AL+   C++    E A ++  
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGE-------KPDIVTYNALMEGYCSRENVHE-ARELFN 324

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++  +G    +  +N  +    K   +     L+KE+ +   V  + ++N +I  LC   
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++     L   M  S   P+VV +N++I+  C+ G +  AL +   + +M    V PN V
Sbjct: 385 RISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV---LVMMMKKGVKPNIV 441

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +++G+C    V  A++I   M+K+G++ ++  Y  LI+GY +    +EA+ L  EM
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
             + L+P+   YNS I  L   G +     +L +M D    PD  TY+IL    C+    
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  L  Q++E  +  D Y+ + +++ LCK   L  A+  L  +++ G  P++ TY  L
Sbjct: 562 DKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTIL 620

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+  CK G+   A+ +   M+  ++ P+ + +  II  L +    D A+ L +     GL
Sbjct: 621 INALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680

Query: 531 LD 532
           ++
Sbjct: 681 VN 682



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 194/426 (45%), Gaps = 39/426 (9%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C+   +++A++ + RM++    P    F+ ++    ++G    A+ LF ++       + 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQL---QSKGIS 87

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+  T   +IN +       FA  +   ++K+G   N+ T+ T+I+G+   G   +AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
           C  ++ +G             +LF                      D FTY  L  GL +
Sbjct: 148 CQNLLAQG-------------YLF----------------------DQFTYGTLINGLSK 172

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           NG +K A  L  ++ +  +  +   Y+ LI+ LCK   ++ A  L S +  RG++ D +T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDAAKSLLQAS 525
           Y +LIDG C  G  +   Q+   M +    P+   +N +I+ LCK+   L+A   L   S
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +R    D +TYN L+ GY     + EA  +F+ M   G+  + + YN+LI+  CK     
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L K +    ++P   +Y +L+     +     V +L D+M  S   PD  TYN +I
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412

Query: 646 SPLLGE 651
             L  E
Sbjct: 413 DALCKE 418



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 169/339 (49%), Gaps = 3/339 (0%)

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYA--RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           IRYA+ K  I      +    + +   R  + ++A+   + MV+    P   V++  +  
Sbjct: 5   IRYAIPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGA 64

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           +   G    A+ + + +  K I P   T++IL            AF L   +L+     +
Sbjct: 65  IVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPN 124

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             ++N +IN  C +  +  A     +++ +G + D  TYGTLI+G  K G I+ A+ + +
Sbjct: 125 LVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQ 184

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFING 547
            M+K   +PNLV+Y+++I+GLCKD  +  A  L  Q  +R  LLDA+TYN+LI+G    G
Sbjct: 185 EMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVG 244

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +  E   + ++M    +  +   +NILI+ LCK G   +A+ ++ +M   G  PD VTY 
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            L+  +    +  E  EL + MV  G+ PD   YN +I 
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLID 343


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 248/483 (51%), Gaps = 11/483 (2%)

Query: 181 IHAWNNFLSHLVKLNEIGRFW----KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           I  +   LS +VK+   G+++     L K+M   G   N+ T +++I       +++ A 
Sbjct: 97  IIQFTKLLSAIVKM---GQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAF 153

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           S+  +++K G+ P +V F  +IN  C+VG    A++LF  M V  G    P+  T+  II
Sbjct: 154 SVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDM-VARG--CRPDVYTYTTII 210

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           NG CK+G    A  +   M +AG   NV TY+T+ID + +     EAL +   M  +G+ 
Sbjct: 211 NGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGIS 270

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+   YNS I  L      + A  +L++M   +I PD  T+++L   +C+ G V +A  +
Sbjct: 271 PDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGV 330

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
              + E  +  D  +Y+ L+      + +  A++L  +MI +G  PD+ +Y  LI+GYCK
Sbjct: 331 LKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCK 390

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAIT 535
              I+ A Q++  M      PN V YN++I+GLC+  SL  A++L +     G L +  T
Sbjct: 391 VKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y+ L++G+   G   +AF +F  M++     N V YNILI+ +CK G  + AR+L   + 
Sbjct: 451 YSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELF 510

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           + G+ P+   YTT++    K    +E +E   +M   G  PD  +YN II   L  K   
Sbjct: 511 VKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDES 570

Query: 656 DQV 658
             V
Sbjct: 571 RAV 573



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 243/502 (48%), Gaps = 13/502 (2%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           K  P +  F  L+ A  ++G     YD +    +++++ G S +I+  +  ++    L  
Sbjct: 92  KPLPCIIQFTKLLSAIVKMGQY---YDTVISLTKQMELAGLSPNIYTLSILINCFSHLQR 148

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           +   + +  +++  G    + TF  +I  LCK  K  +A+ L+  M+  G  P+V  +  
Sbjct: 149 VDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT 208

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           IIN  C++G+   A  L +KM         PN VT++ II+   K  RV  A +I   M 
Sbjct: 209 IINGLCKIGETAAAAGLLKKM---EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK 265

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             GI  ++ TY +LI G       +EA  L +EM    +MP+ V +N  +  +  EG V 
Sbjct: 266 VKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVS 325

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  VL  M +  + PD  TYS L  G      V +A KL + ++ +    D +SYNILI
Sbjct: 326 EAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILI 385

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N  CK   +  AKQL + MI +GL P+ ++Y TLI G C+ G++  A  +++NM      
Sbjct: 386 NGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNL 445

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAM 555
           PNL  Y+ +++G CK      A  L +A Q      + + YN LI+    +G + +A  +
Sbjct: 446 PNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKL 505

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           FSE+   G+  N   Y  +IN LCK G   +A E  + M   G  PD ++Y  ++  F  
Sbjct: 506 FSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLH 565

Query: 616 NCSPEEVIELHDDMVLSGVSPD 637
           +      ++L  +M   G   D
Sbjct: 566 HKDESRAVQLIGEMRDKGFIAD 587



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 232/474 (48%), Gaps = 6/474 (1%)

Query: 135 LLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L    E+   +P ++    L+   + +   + A+ V+ K+   G   +I  +   ++ L 
Sbjct: 120 LTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLC 179

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K+ +  +  +L+ +MV+ G   +V T+  +I  LCK  +   A  L  +M ++G  PNVV
Sbjct: 180 KVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV 239

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            ++ II+   +   +  AL +F  M V     + P+  T+N +I G C   + + A  + 
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKV---KGISPDIFTYNSLIQGLCNFSQWKEASALL 296

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M    I  ++ T+  L+D   + G   EA  +   M + G+ P+ V Y+S ++     
Sbjct: 297 NEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLR 356

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            +V  A  +   MI K   PD F+Y+IL  G C+   + +A +L N+++ + +  +  SY
Sbjct: 357 SEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSY 416

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N LI+ LC+  +L  A+ L  +M   G +P++ TY  L+DG+CK G    A +++  M+ 
Sbjct: 417 NTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS 476

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
              KPNLV+YN +I+ +CK  +L  A+ L       GL  +A  Y T+ING    G + E
Sbjct: 477 TYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDE 536

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A   F  M   G   +++ YN++I          +A +L+  M   G I D  T
Sbjct: 537 ALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 212/431 (49%), Gaps = 3/431 (0%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C    +++AL+ +  ML     P ++ F  +++   ++G     +    K   ++G S  
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLS-- 130

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN  T + +IN F  L RV+ A  +   +IK G+   + T+ TLI+   + G   +A+ L
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D+MV RG  P+   Y + I+ L   G+   A  +L  M +    P+  TYS +     +
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +  V +A  + + +  + +  D ++YN LI  LC  +    A  LL+ M    ++PDI+T
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  L+D  CK G +  A  V + M ++  +P++V Y+S++ G    + +  A+ L  A  
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G   D  +YN LINGY    +I EA  +F+EM + G+  N V YN LI+ LC+ G  +
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +AR L K M  +G +P+  TY+ L+  F K     +   L   M  +   P+   YN +I
Sbjct: 431 EARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490

Query: 646 SPLLGEKSAED 656
             +    +  D
Sbjct: 491 DAMCKSGNLRD 501


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 270/525 (51%), Gaps = 14/525 (2%)

Query: 140 EICK-ATPAVFDALVRACTQIG-ATEGAYD---VIQKLKVKGHSVS---IHAWNNFLSHL 191
           E+CK   P  FDA+      +G   +G  D    + ++ V+G  +    +  WN+ +   
Sbjct: 127 EMCKRGVP--FDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGY 184

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K+ ++   + + + M + G   +V  +N ++  LC+  +++ A  +   M + G+ PNV
Sbjct: 185 CKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNV 244

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           V + M I E C+   ++ A  L+ +M V  G  VLP+ VT + ++ G CK GR   A  +
Sbjct: 245 VTYTMFIVEYCRRNAVDDAFSLYEEM-VRKG--VLPDVVTLSALVGGLCKDGRFSEAYAL 301

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M K G   N  TY  LID  A+     E+L L  E+V RG++ + ++Y + + WL  
Sbjct: 302 FREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCK 361

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           EG ++ A  +    +  +  P+  TY++L   LC+ G V  A ++ +++ E+ +  +  +
Sbjct: 362 EGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVT 421

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           ++ +IN L K   +  A   +  M  RG+ P+++TYGT+IDG  K    E A+ VY  M 
Sbjct: 422 FSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML 481

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIA 550
               + N  I +S++NGL K+  ++ A++L  + ++R  LLD + Y TLI+G F  G + 
Sbjct: 482 CEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            AF +  E+    +  + V YN+ IN LC  G  ++A   ++ M   G+ PD VTY T++
Sbjct: 542 AAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMI 601

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
              S+     + ++L + M  S + P+  TY+ +I  L    + E
Sbjct: 602 AAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVE 646



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 247/502 (49%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              ALV    + G    AY + ++++  G + +   +   +  L K         L  E+
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G V ++  +  ++  LCKE K++EA  ++   L     PN V + ++I+  C+ G++
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M      S+ PN VT + IING  K G V  A +    M + GID NV TY
Sbjct: 401 DGAEQVLSEM---EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTY 457

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+IDG  +    E AL +  EM+  G+  N  + +S ++ L   G +E A  +  +M +
Sbjct: 458 GTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNE 517

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  DH  Y+ L  GL + G +  AFK+  ++ E++++ DA  YN+ IN LC       
Sbjct: 518 RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKE 577

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+  L  M   GL PD +TY T+I    + G    A+++   MK+   KPNL+ Y+++I 
Sbjct: 578 AESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIV 637

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL +  +++ AK LL      G    ++T+  ++       +      +   M N G+  
Sbjct: 638 GLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCA 697

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN L+  LC  G  ++A  +++ M   GI PD +T+  L+    K+   +     +
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTY 757

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           D M+  G+SP+  T+N ++  L
Sbjct: 758 DQMLYHGISPNVATFNTLLGGL 779



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 271/600 (45%), Gaps = 55/600 (9%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA------------- 144
           C ++  L   +R +++L L+G ++S   V  L     L+D   +CK              
Sbjct: 318 CMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDW--LCKEGKIDEAKDMFRHA 375

Query: 145 -----TP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
                TP    +  L+ A  + G  +GA  V+ +++ K  S ++  +++ ++ LVK   +
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
           G+     +EM   G   NV T+  VI    K    E AL +Y+ ML  G+  N    + +
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSL 495

Query: 258 INEACQVGDLEFALKLFRKM---GVM-----------------------------SGDSV 285
           +N   + G +E A  LFR+M   GV+                             +  ++
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           LP++V +N  IN  C LG+ + AE     M   G+  +  TY T+I   +R G + +AL+
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALK 615

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L + M +  + PN + Y++ I  LF  G VE A ++L++M      P   T+  + +   
Sbjct: 616 LLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACS 675

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           +        ++H  ++   +  D   YN L+  LC +     A  +L  M  RG+ PD I
Sbjct: 676 QGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTI 735

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           T+  LI G+ K G+++ A   Y+ M      PN+  +N+++ GL     +  +  +L   
Sbjct: 736 TFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEM 795

Query: 526 QRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           ++ G+  + +TY+ L+ GY       EA  ++ EM   G       YN LI+   K G  
Sbjct: 796 KKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMM 855

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            QA+EL   M   G++P   TY  LV+ +SK  +  EV +   DM   G SP   T ++I
Sbjct: 856 SQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 225/446 (50%), Gaps = 6/446 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP--NVVCFNMIINE 260
           L  EM   G   +  T N V+  LC++ +++ A +L   M++ G     +VV +N +++ 
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDG 183

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+VGD+E A  +  +M       V  + V +N ++ G C+ G V+ A ++   M + G+
Sbjct: 184 YCKVGDMETAFAVAERM---KAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGV 240

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + NV TY   I  Y R  + ++A  L +EMV++G++P+ V  ++ +  L  +G    A  
Sbjct: 241 EPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYA 300

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +  +M      P+H TY +L   L +     ++  L  +V+   +V D   Y  L+++LC
Sbjct: 301 LFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLC 360

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  AK +    +     P+ +TY  LID  CK GN++GA QV   M++    PN+V
Sbjct: 361 KEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVV 420

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            ++SIINGL K   +  A   ++  +  G+  + +TY T+I+G F       A  ++ EM
Sbjct: 421 TFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G+ VNK   + L+N L K G  ++A  L + M   G++ D+V YTTL+    K  + 
Sbjct: 481 LCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNL 540

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAII 645
               ++  ++    + PD   YN  I
Sbjct: 541 PAAFKVGQELTEKNLLPDAVVYNVFI 566



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 214/466 (45%), Gaps = 9/466 (1%)

Query: 133 EGLLDSYE--ICKATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           E  LD Y   +C+       + D+LV    + G  E A  + +++  +G  +    +   
Sbjct: 471 EAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTL 530

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +  L K   +   +K+ +E+     + +   +N+ I  LC   K +EA S    M  +G+
Sbjct: 531 IDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGL 590

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+ V +N +I    + G    ALKL   M      S+ PN +T++ +I G  + G VE 
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGM---KRSSIKPNLITYSTLIVGLFEAGAVEK 647

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A+ +   M  +G      T+  ++   ++G  S+  L + + M+  GL  +  VYN+ + 
Sbjct: 648 AKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVR 707

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G    A+ VL +M  + I PD  T++ L  G  ++G +  AF  ++Q+L   +  
Sbjct: 708 VLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISP 767

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  ++N L+  L  +  +  +  +L+ M  RG+ P  +TY  L+ GY K  N   AV++Y
Sbjct: 768 NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY 827

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFIN 546
             M      P +  YN++I+   K   +  AK L    Q  G+L  + TY+ L++G+   
Sbjct: 828 CEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKL 887

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
               E      +M+  G + +K   + +     K G   +AR L+K
Sbjct: 888 RNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLK 933



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 4/262 (1%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  +Y+++  G    G +     L  ++ +  +  DA + N ++  LC+   +  A  L 
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 453 SSMIVRGLIP--DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
             M+  G I   D++ + +L+DGYCK G++E A  V E MK      ++V YNS++ GLC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 511 KDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +   +DAA+ ++   +R G+  + +TY   I  Y     + +AF+++ EM   G+  + V
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
             + L+  LCK G + +A  L + M   G  P++VTY  L+   +K     E + L  ++
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 630 VLSGVSPDNQTYNAIISPLLGE 651
           V  GV  D   Y A++  L  E
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKE 362



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 162/351 (46%), Gaps = 3/351 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     ++ ++ A ++ G T  A  ++  +K      ++  ++  +  L +   + +   
Sbjct: 591 KPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKY 650

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EM S G+     T   V+ A  +  + +  L ++  M+ +G+  ++  +N ++   C
Sbjct: 651 LLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G    A+ +  +M   SG  + P+++T N +I G  K G ++ A      M+  GI  
Sbjct: 711 YNGMTRKAMVVLEEM---SGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISP 767

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV T+ TL+ G    G   E+  + +EM KRG+ P+N+ Y+  +     + +   A+ + 
Sbjct: 768 NVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLY 827

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ K   P   TY+ L     + G + QA +L N++    ++  + +Y+IL++   K 
Sbjct: 828 CEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKL 887

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            N    ++ L  M  +G  P   T  ++   + K G    A ++ +N+ KV
Sbjct: 888 RNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 241/489 (49%), Gaps = 45/489 (9%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V TF  ++  LC+E ++ EA++L  RM+++G+ P+ + +   ++  C++GD   AL L 
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240

Query: 275 RKM------------------GV---------------MSGDSVLPNSVTHNCIINGFCK 301
           RKM                  G+               M    + PN VT+NC+I GFC 
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A+ +   M++  I  NV TY  LI+ + + G   EA  L DEM+ RG++PN + 
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YNS I     +  ++ A  +   M  K   PD FT++ L  G C    +    +L +++ 
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +V +  +YN LI+  C   +L AA  L   MI  G+ PDI+T  TL+DG C  G ++
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480

Query: 482 GAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
            A+++++ M+K +            +P+++ YN +I GL  +     A+ L +     G+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D ITY+++I+G     ++ EA  MF  M +   + N V +N LIN  CK G      E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M   GI+ D + Y TL+  F K  +    +++  +M+ SGV PD  T   +++   
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660

Query: 650 GEKSAEDQV 658
            ++  E  V
Sbjct: 661 SKEELERAV 669



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 232/484 (47%), Gaps = 29/484 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +   V    ++G T  A ++++K++   H   ++  ++  +  L K         L+ E
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   N+ T+N +I   C   +   A  L   ML+  I PNVV +N +IN   + G 
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A +L+ +M       ++PN++T+N +I+GFCK  R++ AE++ Y M   G   +V T
Sbjct: 339 FFEAAELYDEM---LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + TLIDGY      ++ + L  EM +RGL+ N V YN+ IH     GD+  AL +   MI
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +CPD  T + L  GLC NG +K A ++   + +  M  DA                 
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA----------------- 498

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
                  S    G+ PD++TY  LI G    G    A ++YE M      P+ + Y+S+I
Sbjct: 499 -------SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI 551

Query: 507 NGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK + LD A  + +    +    + +T+NTLINGY   G++ +   +F EM   GI 
Sbjct: 552 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIV 611

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + + Y  LI    K G    A ++ + MI  G+ PD +T   ++T F      E  + +
Sbjct: 612 ADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAM 671

Query: 626 HDDM 629
            +D+
Sbjct: 672 LEDL 675



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 247/504 (49%), Gaps = 20/504 (3%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +I   E A D+   +       S+  +N  +  +V++        LY++M       ++ 
Sbjct: 58  EIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIY 117

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +F ++I   C   KL  ALS + ++ K G+ P+VV F  +++  C    +  AL LF ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                    P+ +T   ++NG C+ GRV  A  +   M++ G+  +  TY T +DG  + 
Sbjct: 178 -------CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230

Query: 338 GSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
           G +  AL L  +M +   + PN V+Y++ I  L  +G    +  +  +M DK I P+  T
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ +  G C +G    A +L  ++LE  +  +  +YN LIN   K      A +L   M+
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            RG+IP+ ITY ++IDG+CK   ++ A  ++  M      P++  + ++I+G C    +D
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 410

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
               LL    R GL+ + +TYNTLI+G+ + G +  A  +  +M + G+  + V  N L+
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470

Query: 576 NFLCKFGCYQQARELMKVM-----------ILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           + LC  G  + A E+ K M             +G+ PD +TY  L+          E  E
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           L+++M   G+ PD  TY+++I  L
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGL 554



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 189/384 (49%), Gaps = 14/384 (3%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A  ++Q++  +  S ++  +N  ++  VK  +     +LY EM+  G + N  T+
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I   CK+ +L+ A  ++Y M   G  P+V  F  +I+  C    ++  ++L  +M  
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM-- 419

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                ++ N+VT+N +I+GFC +G +  A ++   MI +G+  ++ T  TL+DG    G 
Sbjct: 420 -PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 340 SEEALRLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            ++AL +   M K            G+ P+ + YN  I  L  EG    A  +  +M  +
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I PD  TYS +  GLC+   + +A ++   +  +    +  ++N LIN  CK+  +   
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L   M  RG++ D I Y TLI G+ K GNI GA+ +++ M      P+ +   +++ G
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658

Query: 509 LCKDASLDAAKSLLQASQRIGLLD 532
                 L+ A ++L+  QR  L D
Sbjct: 659 FWSKEELERAVAMLEDLQRYQLED 682


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 167/591 (28%), Positives = 293/591 (49%), Gaps = 28/591 (4%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCA--IVHLLVNWRRFDDALLLMGNLMSANSVSPL 129
           + P+L L F+   G   R     + + A  ++  L   +R DDA+ ++   M+     P 
Sbjct: 22  RRPELGLAFF---GRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPD 78

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL-KVKGH-SVSIHAWNNF 187
            F      SY I          L R C     ++ A D+++ + K +G  S  +  +N  
Sbjct: 79  AF------SYAI---------VLKRLCDD-NRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +    K  +IG+   LY EM+  G+V +V T N +I ALCK   ++ A  L  +M+ +G+
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            PN V +  +I+    +G  E A K+FR+M   +G  ++P+ V+ N  ++  CK GR + 
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREM---TGRGLIPDIVSWNSFMDSLCKHGRSKE 239

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A EI Y+M   G   N+ TY  L+ GYA  G   + +   + M   G++ N +V+   I 
Sbjct: 240 AAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILID 299

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G ++ A+ +LS+M  + + PD FTYS L   LCR G +  A    NQ++   +  
Sbjct: 300 AYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQP 359

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI-PDIITYGTLIDGYCKGGNIEGAVQV 486
           +   Y+ LI   C   +L  AK+L+  M+  G+  P+I  + +++   CK G +  A  +
Sbjct: 360 NTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHI 419

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           ++ +K + ++ +++++N++I+G C    +  A S+L A    G+  D  TYNTL+NGYF 
Sbjct: 420 FDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFK 479

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +G+I +   +F EM +  I    V YNI+++ L + G    A++++  MI  G      T
Sbjct: 480 SGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPT 539

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           Y  ++    +N   +E I +   +    V  +  T N +I+ +   +  E+
Sbjct: 540 YNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREE 590



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 252/579 (43%), Gaps = 70/579 (12%)

Query: 34  IVFRAICVNLR-QRKWKILEQMA-------PSLTNSLVNRVVSEFRKSPKL--ALEFYTW 83
           IV + +C + R Q+   +L  MA       P +     N V+  F K  K+  A   Y  
Sbjct: 84  IVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVT--YNTVIHGFFKEGKIGKACNLYHE 141

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK 143
           + +   F   + +  +I++ L   R  D+A LL+  ++  N V P               
Sbjct: 142 MMQQG-FVPDVVTHNSIINALCKARAVDNAELLLRQMVD-NGVPP--------------- 184

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
                + +++   + +G  E A  + +++  +G    I +WN+F+  L K        ++
Sbjct: 185 -NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M + G+  N+ T+ ++++    E    + +S +  M   GI  N + F ++I+   +
Sbjct: 244 FYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAK 303

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ A+ +  +M    G  + P+  T++ +I+  C++GR+  A +    MI  G+  N
Sbjct: 304 RGMMDEAMLILSEM---QGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPN 360

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGL-MPNNVVYNSTIHWLFAEGDV------- 375
              Y +LI G+   G   +A  L  EM+  G+  PN   +NS +H +  EG V       
Sbjct: 361 TVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420

Query: 376 -------------------EG---------ALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
                              +G         A  VL  MI   I PD FTY+ L  G  ++
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +     L  ++ ++ +     +YNI+++ L ++    AA+++L  MI  G    + TY
Sbjct: 481 GRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTY 540

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             ++ G C+    + A+ +++ +  +  K N+   N++IN +      + AK L  A   
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISD 600

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GL+ +A TY  +I      G + EA  MFS M   G A
Sbjct: 601 SGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCA 639



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 143/331 (43%), Gaps = 74/331 (22%)

Query: 392 PDHFTYSILTKGLCRNG--------------------------------CVKQ---AFK- 415
           P  FTY ++  G CR                                  C K+   A K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI--PDIITYGTLIDG 473
           L  ++ E   V DA+SY I++  LC  N    A  LL  M     +  PD++TY T+I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           + K G I  A  +Y  M +    P++V +NSIIN LCK  ++D A+ LL+     G+  +
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +TY ++I+GY   G+  EA  MF EM   G+  + V +N  ++ LCK G  ++A E+  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 593 VMILHGIIPDYVTY-----------------------------------TTLVTRFSKNC 617
            M   G  P+ VTY                                   T L+  ++K  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +E + +  +M   G+SPD  TY+ +IS L
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISAL 336



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 5/253 (1%)

Query: 141 ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           I +   A F+++V +  + G    A+ +   +K  G    I  +N  +     + E+G+ 
Sbjct: 392 IPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKA 451

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +   M+S G   +  T+N ++    K  ++++ L+L+  M    I P  V +N+I++ 
Sbjct: 452 FSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDG 511

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSV-LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             + G    A K+  +M +  G +V LP   T+N I+ G C+    + A  +   +    
Sbjct: 512 LFRAGRTVAAQKMLHEM-IGCGTTVSLP---TYNIILKGLCRNNCTDEAIVMFQKLCTMN 567

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N+ T  T+I+        EEA  L   +   GL+PN   Y   I  L  EG VE A 
Sbjct: 568 VKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627

Query: 380 FVLSDMIDKHICP 392
            + S M      P
Sbjct: 628 NMFSSMEKSGCAP 640


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 181/615 (29%), Positives = 292/615 (47%), Gaps = 46/615 (7%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL-MSANSVSPLEFLE 133
           KLAL+  + + + +         C    +L   +    A+ L+ +L M+  S S +    
Sbjct: 85  KLALKILSSIVQRSGLERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSAV--FS 142

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            LL +   C + P VFD LV A  +      A   I  +   G   S HA N  L+ LV+
Sbjct: 143 SLLCTISRCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVE 202

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           + E    W   KE +   +  +V T N+V+ ++C E  L+ A  + ++M KS   PNV+ 
Sbjct: 203 IGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKM-KSCSLPNVIT 261

Query: 254 FNMIINEACQVGDLEFALKLFRKM---GV-----------------------------MS 281
           +N I++   + G  + A+ +   M   GV                             M 
Sbjct: 262 YNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMR 321

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
           GD++ P+  T+N +I GF    ++  A  I   M++ G+  ++ TY TLIDGY R G+ +
Sbjct: 322 GDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTID 381

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSIL 400
           EALR+  EM   G+ P+ V Y++ ++     G V  A F + D ++K+ C PD +TY  L
Sbjct: 382 EALRVLYEMQVAGVKPSEVTYSAMLN-----GSVHEA-FSVYDNMEKYGCSPDVYTYRNL 435

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
            +GLC+ G + QA +  + ++      D  + N L+  +C   +L  A  L   M+    
Sbjct: 436 LRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINF 495

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           IPDI TY  L+ G+C+ G I  AV + + M +    P++V Y  ++ GL K+  + AA  
Sbjct: 496 IPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASY 555

Query: 521 LLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           L Q    +     D I YN+++NGY   GK+ +      +M    +  N   YNIL++  
Sbjct: 556 LFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGH 615

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G   ++  L K M+  GI P  VTY  L+   SK+   E  ++  D MVL G+ PD 
Sbjct: 616 IKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDR 675

Query: 639 QTYNAIISPLLGEKS 653
            +++ +I+    EKS
Sbjct: 676 LSFDVLINA-FSEKS 689



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 222/435 (51%), Gaps = 3/435 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L ++MV+  ++ +++T+ +++   C++ K+  A+ L   ML+ G+ P++V +  ++    
Sbjct: 486 LCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLI 545

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G ++ A  LF++  ++  + +  + + +N ++NG+ K G++   E   Y M +  +  
Sbjct: 546 KEGQVKAASYLFQE--IICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYP 603

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  +Y  L+ G+ + G    ++ L  +MV++G+ P NV Y   I  L   G +E A+  L
Sbjct: 604 NPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFL 663

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ + I PD  ++ +L         +  A +L N +   +M   + +Y+ +IN L + 
Sbjct: 664 DKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRK 723

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           N L  +  +L  M+  GL P    Y  LI+  C+ G+I GA ++ E M  +   P  V  
Sbjct: 724 NWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVAD 783

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
           +SI+ GL K   ++    +  +  R G++  I T+ TL++G     KI++A  + S M +
Sbjct: 784 SSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMES 843

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+ ++ V YN+LI  LCK  C   A EL + M   G+ P+  TYTTL           E
Sbjct: 844 CGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLE 903

Query: 622 VIELHDDMVLSGVSP 636
             +L +D+   G+ P
Sbjct: 904 GEKLLNDIEDRGLVP 918



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 237/493 (48%), Gaps = 5/493 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G+   A+ V   ++  G S  ++ + N L  L K   + +  +    +V      +  T 
Sbjct: 408 GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTL 467

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N ++  +C    L+EAL L  +M+     P++  + ++++  C+ G +  A+ L +   +
Sbjct: 468 NALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQ---M 524

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGG 338
           M    ++P+ VT+ C++ G  K G+V+ A  +   +I K G+  +   Y ++++GY + G
Sbjct: 525 MLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAG 584

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              +      +M +  + PN   YN  +H    +G +  ++++  DM+ K I P + TY 
Sbjct: 585 KLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYR 644

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           +L  GL ++G ++ A K  ++++ E +  D  S+++LIN   + + ++ A QL + M   
Sbjct: 645 LLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWL 704

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            + P   TY  +I+G  +   ++ +  V  +M +   +P    Y ++IN  C+   ++ A
Sbjct: 705 YMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGA 764

Query: 519 KSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L +    +G++ A +  ++++ G    GK+ E   +F  +   G+      +  L++ 
Sbjct: 765 FRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHG 824

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK      A  L  +M   G+  D VTY  L+T   K     + +EL+++M   G+ P+
Sbjct: 825 LCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPN 884

Query: 638 NQTYNAIISPLLG 650
             TY  +   + G
Sbjct: 885 VTTYTTLTEAIYG 897



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/566 (23%), Positives = 245/566 (43%), Gaps = 70/566 (12%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A  V++ ++  G    ++ +N  +  L K+      + L K M       +  T+
Sbjct: 273 GRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTY 332

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I     E K+  A+ ++  ML+ G+ P++  +  +I+  C+ G ++ AL++  +M V
Sbjct: 333 NTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQV 392

Query: 280 MSGDSVLPNSVTHNCIING------------------------------FCKLGRVEFAE 309
                V P+ VT++ ++NG                               CK G +  A+
Sbjct: 393 AG---VKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAK 449

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E    ++      + +T   L+ G    GS +EAL LC++MV    +P+   Y   +   
Sbjct: 450 EFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGF 509

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL-EEHMVGD 428
             +G +  A+ +L  M++K + PD  TY+ L KGL + G VK A  L  +++ +E M  D
Sbjct: 510 CRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYAD 569

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +YN ++N   K+  L   +  +  M    + P+  +Y  L+ G+ K G++  ++ +Y+
Sbjct: 570 CIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYK 629

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
           +M +   KP  V Y  +I GL K   ++ A   L      G+  D ++++ LIN +    
Sbjct: 630 DMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKS 689

Query: 548 KIAEAFAMFS-----------------------------------EMRNVGIAVNKVGYN 572
           ++++A  +F+                                   +M   G+      Y 
Sbjct: 690 RMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYI 749

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LIN  C+FG    A  L + M   GI+P  V  +++V   SK    EE I +   ++ +
Sbjct: 750 ALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRA 809

Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
           G+ P   T+  ++  L  E    D +
Sbjct: 810 GMVPTIATFTTLMHGLCKEAKISDAL 835



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 185/389 (47%), Gaps = 4/389 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +  L++   + G  + A  + Q++  K G      A+N+ ++  +K  ++ +      +
Sbjct: 536 TYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYD 595

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       N  ++N++++   K+  L  ++ LY  M++ GI P  V + ++I    + G 
Sbjct: 596 MNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGM 655

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A+K   KM V+ G  + P+ ++ + +IN F +  R+  A ++   M    +  + +T
Sbjct: 656 IEIAVKFLDKM-VLEG--IYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKT 712

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+ +I+G  R    + +  +  +MV+ GL P +  Y + I+     GD+ GA  +  +M 
Sbjct: 713 YSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMT 772

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I P     S + +GL + G V++   +   ++   MV    ++  L++ LCK   ++
Sbjct: 773 ALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKIS 832

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L S M   GL  D++TY  LI G CK   +  A+++YE MK    +PN+  Y ++ 
Sbjct: 833 DALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLT 892

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAIT 535
             +         + LL   +  GL+ + T
Sbjct: 893 EAIYGTGRTLEGEKLLNDIEDRGLVPSYT 921


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 158/561 (28%), Positives = 277/561 (49%), Gaps = 6/561 (1%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDA-LLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           N F+H++ES C + H+L   R + DA  +L   ++S   +   +  + L  +  +C    
Sbjct: 4   NGFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGF 63

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            VFDAL      +G  E A     K+K         + N  L    KL +     + +K+
Sbjct: 64  GVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKD 123

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G    V T+N++I  + KE  +E A  L+  M   G+ P+ V +N +I+   +VG 
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+  +  F +M  MS +   P+ +T+N +IN FCK G++    E    M ++G+  NV +
Sbjct: 184 LDDTVYFFEEMKSMSCE---PDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+TL+D + +    ++A++   +M + G +PN   Y S +      G++  A  + ++M+
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +  +  +  TY+ L  GLC    +K+A KL  +++   ++ +  SYN LI+   K+ N+ 
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +LL+ +  RG+ PD++ YGT I G C    IE A  V   M++   K N +IY +++
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN-VGI 564
           +   K  +      LL+  Q +   +  +T+  LI+G   N  +++A   F  M N  G+
Sbjct: 421 DAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGL 480

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N   Y  +I+ LCK    + A  L + M   G++PD   YT+L+    K  +  E + 
Sbjct: 481 QPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALA 540

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           L D M   G+  D   Y +++
Sbjct: 541 LRDKMAEIGMKLDLLAYTSLV 561



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 229/464 (49%), Gaps = 5/464 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T   ++ ++    + G  E A  + +++K +G       +N+ +    K+  +     
Sbjct: 130 KPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVY 189

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            ++EM S     +V T+N +I   CK  KL + L  Y  M +SG+ PNVV ++ +++  C
Sbjct: 190 FFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFC 249

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++ A+K +  M  +     +PN  T+  +++  CK+G +  A  +   M++ G++ 
Sbjct: 250 KEDMMQQAIKFYVDMRRVGH---VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEW 306

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY  LIDG       +EA +L  +MV  G++PN   YN+ IH      +++ AL +L
Sbjct: 307 NVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELL 366

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           +++  + I PD   Y     GLC    ++ A  + N++ E  +  +   Y  L++   KS
Sbjct: 367 NELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKS 426

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK-KVEKKPNLVI 501
            N      LL  M        ++T+  LIDG CK   +  A+  +  M      +PN  +
Sbjct: 427 GNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAV 486

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y ++I+GLCK+  + AA +L +   + GL+ D   Y +L++G    G + EA A+  +M 
Sbjct: 487 YTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMA 546

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            +G+ ++ + Y  L+    +    Q+AR  ++ MI   I+PD V
Sbjct: 547 EIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 221/470 (47%), Gaps = 46/470 (9%)

Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +E   GL +  +     P    +++++    ++G  +      +++K       +  +N+
Sbjct: 149 IEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNS 208

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            ++   K  ++ +  + Y+EM   G   NV +++ ++ A CKE  +++A+  Y  M + G
Sbjct: 209 LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVG 268

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             PN   +  +++  C++G+L  A +L  +M  +    V  N VT+  +I+G C   R++
Sbjct: 269 HVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG---VEWNVVTYTALIDGLCDAERMK 325

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            AE++   M+ AG+  N+ +Y  LI G+ +  + + AL L +E+  RG+ P+ ++Y + I
Sbjct: 326 EAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFI 385

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICP-------------------------------DH- 394
             L     +E A  V+++M +  I                                 DH 
Sbjct: 386 WGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHE 445

Query: 395 ---FTYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQ 450
               T+ +L  GLC+N  V +A     ++  +  +  +A  Y  +I+ LCK N + AA  
Sbjct: 446 VTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATT 505

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M   GL+PD   Y +L+DG  K GN+  A+ + + M ++  K +L+ Y S++ G  
Sbjct: 506 LFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFS 565

Query: 511 KDASLDAAKSLLQASQRIG---LLDAITYNTLINGYFINGKIAEAFAMFS 557
           +   L  A+S L+  + IG   L D +    ++  ++  G I EA  + S
Sbjct: 566 QCNQLQKARSFLE--EMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQS 613



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 1/319 (0%)

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  EEA +   +M +  + P     N  +H     G  +G      DMI     P  FTY
Sbjct: 77  GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTY 136

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +I+   + + G ++ A  L  ++    ++ D  +YN +I+   K   L         M  
Sbjct: 137 NIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
               PD+ITY +LI+ +CK G +   ++ Y  MK+   KPN+V Y+++++  CK+  +  
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256

Query: 518 AKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A       +R+G + +  TY +L++     G +++AF + +EM  VG+  N V Y  LI+
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LC     ++A +L   M+  G+IP+  +Y  L+  F K  + +  +EL +++   G+ P
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQP 376

Query: 637 DNQTYNAIISPLLGEKSAE 655
           D   Y   I  L G +  E
Sbjct: 377 DLLLYGTFIWGLCGLEKIE 395



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 2/263 (0%)

Query: 388 KHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +++C P    +  L   L   G +++A +  +++    +     S N L++   K     
Sbjct: 56  RNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 115

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             K+    MI  G  P + TY  +ID   K G+IE A  ++E MK     P+ V YNS+I
Sbjct: 116 GVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMI 175

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G  K   LD      +  + +    D ITYN+LIN +  +GK+ +    + EM+  G+ 
Sbjct: 176 DGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLK 235

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V Y+ L++  CK    QQA +    M   G +P+  TYT+LV    K  +  +   L
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
            ++M+  GV  +  TY A+I  L
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGL 318



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 153/342 (44%), Gaps = 24/342 (7%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++  L +  R  +A  L G +++A  +  L                 A ++AL+    +
Sbjct: 313 ALIDGLCDAERMKEAEKLFGKMVTAGVIPNL-----------------ASYNALIHGFVK 355

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
               + A +++ +LK +G    +  +  F+  L  L +I     +  EM   G   N   
Sbjct: 356 AKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLI 415

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +  ++ A  K     E L L   M +      VV F ++I+  C+   +  A+  F   G
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYF---G 472

Query: 279 VMSGD-SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            MS D  + PN+  +  +I+G CK  +V+ A  +   M + G+  +   Y +L+DG  + 
Sbjct: 473 RMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQ 532

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE-GDVEGALFVLSDMIDKHICPDHFT 396
           G+  EAL L D+M + G+  + + Y S + W F++   ++ A   L +MI + I PD   
Sbjct: 533 GNMLEALALRDKMAEIGMKLDLLAYTSLV-WGFSQCNQLQKARSFLEEMIGEEILPDEVL 591

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
              + K     GC+ +A  L + ++ +H +  + + N L NY
Sbjct: 592 CIGVLKKHYELGCIDEAVGLQSYLM-KHQLLTSDNNNALPNY 632



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 1/192 (0%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +P    +  L       G +E A Q +  MK+    P     N +++   K    D  K 
Sbjct: 60  VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119

Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             +     G    + TYN +I+  +  G I  A  +F EM+  G+  + V YN +I+   
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G         + M      PD +TY +L+  F K+    + +E + +M  SG+ P+  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239

Query: 640 TYNAIISPLLGE 651
           +Y+ ++     E
Sbjct: 240 SYSTLVDAFCKE 251


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/448 (31%), Positives = 240/448 (53%), Gaps = 9/448 (2%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +M+S G    V TF +V+ ALC   +++ A SL   M K G  PN V +  +I+  C
Sbjct: 192 VFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALC 251

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   +  AL+L   M +M  +   P+  T N +I+G C+ GR+  A ++   M+  G   
Sbjct: 252 ENNRVSEALQLLEDMFLMCCE---PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFST 308

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY  L+ G  R G  +EA  L +++      PN V+YN+ I    A G  E A  +L
Sbjct: 309 DALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLL 364

Query: 383 -SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            ++M+     PD +T++I+  GL + G +  A +L N+++ +    +  +Y ILIN  CK
Sbjct: 365 YNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCK 424

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A ++++SM  +GL  + + Y  LI   CK GNIE A+Q++  M     KP++  
Sbjct: 425 QGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYT 484

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           +NS+INGLCK+  ++ A SL       G++ + +TYNTL++ + +   I +AF +  EM 
Sbjct: 485 FNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G  ++ + YN LI  LCK G  ++   L + M+  GI P  ++   L++   +     
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + ++   DM+  G++PD  TYN++I+ L
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGL 632



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 259/520 (49%), Gaps = 19/520 (3%)

Query: 135 LLDSYEICKATPA------VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           LLD + +    P       V D LV       A    YD++ +    G S +++ +   +
Sbjct: 157 LLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR----GVSPTVYTFGVVM 212

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
             L  ++E+     L ++M   G V N   +  +I+ALC+  ++ EAL L   M      
Sbjct: 213 KALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE 272

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V  FN +I+  C+ G +  A KL  +M ++ G S   +++T+  +++G C++G+V+ A
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRM-LLRGFST--DALTYGYLMHGLCRMGQVDEA 329

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC-DEMVKRGLMPNNVVYNSTIH 367
                A++    + N   Y TLI GY   G  EEA  L  + MV  G  P+   +N  I 
Sbjct: 330 R----ALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMID 385

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L  +G +  AL +L++M+ K   P+  TY+IL  G C+ G +++A ++ N +  + +  
Sbjct: 386 GLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSL 445

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +   YN LI  LCK  N+  A QL   M  +G  PDI T+ +LI+G CK   +E A+ +Y
Sbjct: 446 NTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLY 505

Query: 488 ENMKKVEKKPNLVIYNSIING-LCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFIN 546
            +M       N V YN++++  L +D+   A K + +   R   LD ITYN LI      
Sbjct: 506 HDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKT 565

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G + +   +F EM   GI    +  NILI+ LC+ G    A + ++ MI  G+ PD VTY
Sbjct: 566 GAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTY 625

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            +L+    K    +E   L + +   G+ PD  TYN +IS
Sbjct: 626 NSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLIS 665



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 245/490 (50%), Gaps = 17/490 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     ++  L+ A  +      A  +++ + +      +  +N+ +  L +   I    
Sbjct: 236 CVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAA 295

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL   M+  G+  +  T+  +++ LC+  +++EA +L  ++      PN V +N +I+  
Sbjct: 296 KLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGY 351

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G  E A  L     V++G    P++ T N +I+G  K G +  A E+   M+    +
Sbjct: 352 VASGRFEEAKDLLYNNMVIAGYE--PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE 409

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY  LI+G+ + G  EEA  + + M  +GL  N V YN  I  L  +G++E AL +
Sbjct: 410 PNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQL 469

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  K   PD +T++ L  GLC+N  +++A  L++ +  E ++ +  +YN L++    
Sbjct: 470 FGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLM 529

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +++  A +L+  M+ RG   D ITY  LI   CK G +E  + ++E M      P ++ 
Sbjct: 530 RDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIIS 589

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
            N +I+GLC+   ++ A   LQ     GL  D +TYN+LING    G + EA  +F++++
Sbjct: 590 CNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ 649

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV---------- 610
           + GI  + + YN LI+  C  G +  A  L+   +  G IP+ VT++ L+          
Sbjct: 650 SEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWG 709

Query: 611 TRFSKNCSPE 620
            RFSK+ + E
Sbjct: 710 ARFSKDFTVE 719



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 251/506 (49%), Gaps = 11/506 (2%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +P V  F  +++A   +   + A  +++ +   G   +   +   +  L + N +    +
Sbjct: 202 SPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQ 261

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L ++M       +V TFN VI+ LC+  ++ EA  L  RML  G   + + +  +++  C
Sbjct: 262 LLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLC 321

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA-MIKAGID 321
           ++G ++ A  L  K+         PN+V +N +I+G+   GR E A+++ Y  M+ AG +
Sbjct: 322 RMGQVDEARALLNKIPN-------PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYE 374

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T+  +IDG  + G    AL L +EMV +   PN + Y   I+    +G +E A  +
Sbjct: 375 PDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEI 434

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           ++ M  K +  +   Y+ L   LC++G +++A +L  ++  +    D Y++N LIN LCK
Sbjct: 435 VNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK 494

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           ++ +  A  L   M + G+I + +TY TL+  +    +I+ A ++ + M       + + 
Sbjct: 495 NHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNIT 554

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +I  LCK  +++    L +     G+   I + N LI+G    GK+ +A     +M 
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           + G+  + V YN LIN LCK G  Q+A  L   +   GI PD +TY TL++R        
Sbjct: 615 HRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIIS 646
           +   L    V SG  P+  T++ +I+
Sbjct: 675 DACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 152/536 (28%), Positives = 263/536 (49%), Gaps = 26/536 (4%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           ++AP++   +++R VS    +  + ++    V E       ++S+C+++  +       +
Sbjct: 187 RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSE-------VDSACSLLRDMAKHGCVPN 239

Query: 113 ALL---LMGNLMSANSVSPLEFLEGLLDSYEIC-KATPAVFDALVRACTQIGATEGAYDV 168
           +++   L+  L   N VS  E L+ L D + +C +     F+ ++    + G    A  +
Sbjct: 240 SVIYQTLIHALCENNRVS--EALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKL 297

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT--FNLVIYAL 226
           + ++ ++G S     +   +  L ++ ++     L  +      + N NT  +N +I   
Sbjct: 298 LDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNK------IPNPNTVLYNTLISGY 351

Query: 227 CKECKLEEALSLYYR-MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
               + EEA  L Y  M+ +G  P+   FN++I+   + G L  AL+L  +M        
Sbjct: 352 VASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM---VAKRF 408

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            PN +T+  +INGFCK GR+E A EI  +M   G+  N   Y  LI    + G+ EEAL+
Sbjct: 409 EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQ 468

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L  EM  +G  P+   +NS I+ L     +E AL +  DM  + +  +  TY+ L     
Sbjct: 469 LFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFL 528

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
               ++QAFKL +++L      D  +YN LI  LCK+  +     L   M+ +G+ P II
Sbjct: 529 MRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTII 588

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           +   LI G C+ G +  A++  ++M      P++V YNS+INGLCK   +  A +L    
Sbjct: 589 SCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKL 648

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           Q  G+  DAITYNTLI+ +   G   +A  +  +  + G   N+V ++ILIN++ K
Sbjct: 649 QSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 152/522 (29%), Positives = 227/522 (43%), Gaps = 54/522 (10%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKL----KVKGHSVSIHAWNNFLSHLVKLNEIG 198
           K     FDA      ++GA  G + VI+KL    K +G       +   + H  K    G
Sbjct: 93  KGYSHTFDACYLLIDKLGAV-GDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPG 151

Query: 199 RFWKLYKEM---VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           +  +L  +M    SC       ++N+V+  L        A +++Y ML  G+ P V  F 
Sbjct: 152 QATRLLLDMWGVYSCD--PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFG 209

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           +++   C V +++ A  L R    M+    +PNSV                         
Sbjct: 210 VVMKALCMVSEVDSACSLLRD---MAKHGCVPNSVI------------------------ 242

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
                      Y TLI          EAL+L ++M      P+   +N  IH L   G +
Sbjct: 243 -----------YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRI 291

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  +L  M+ +    D  TY  L  GLCR G V +A  L N++   + V     YN L
Sbjct: 292 HEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTV----LYNTL 347

Query: 436 INYLCKSNNLAAAKQLL-SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           I+    S     AK LL ++M++ G  PD  T+  +IDG  K G +  A+++   M    
Sbjct: 348 ISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKR 407

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            +PN++ Y  +ING CK   L+ A  ++ +    GL L+ + YN LI     +G I EA 
Sbjct: 408 FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEAL 467

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +F EM   G   +   +N LIN LCK    ++A  L   M L G+I + VTY TLV  F
Sbjct: 468 QLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAF 527

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
               S ++  +L D+M+  G   DN TYN +I  L    + E
Sbjct: 528 LMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 261/534 (48%), Gaps = 42/534 (7%)

Query: 162 TEGAYDVIQKLKVKGHSVS--IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           ++ A D+ Q +  +G + S  + A+N  +    K  E G+   L+ EM   G   +V T+
Sbjct: 244 SQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTY 303

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           NL+I ALCK   +++A  +  +M  +G  P+ V +N +I+    +G L+ A K+FRK   
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRK--- 360

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    ++PN V  N  +   CK GR + A EI  +M   G   ++ +Y TL+ GYA  G 
Sbjct: 361 MKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGW 420

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             + + L + M   G+  +  V+N  IH     G V+ A+ + ++M  + + PD  TYS 
Sbjct: 421 FADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +     R G +  A +  NQ++   +  +   Y+ +I   C    L  AK+L+S MI +G
Sbjct: 481 VISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKG 540

Query: 460 LI-PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           +  PDI+ + ++I+  CK G +  A  +++ +  + ++P+++ + S+I+G C    +D A
Sbjct: 541 IPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKA 600

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +L A + +G+  D +TY+TL++GYF NG+I +   +F EM+  G+  N V Y I++  
Sbjct: 601 FKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK-NCSPEEVI------------- 623
           L + G    AR+    MI  G       Y  ++    + NC+ E +I             
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFS 720

Query: 624 ---------------------ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                                EL   +  SG+ P+  TY  +I  LL + + ED
Sbjct: 721 ITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVED 774



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 220/451 (48%), Gaps = 7/451 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--IWPNVVCFNMIINE 260
           L   M   G V NV ++++++  LC     + AL L+  M K G    PNVV +N +I+ 
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHG 274

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G+   A  LF +M   +   V P+ VT+N II+  CK   ++ AE +   M   G 
Sbjct: 275 FFKEGETGKACSLFHEM---TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGA 331

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY  +I GYA  G  +EA ++  +M  RGL+PN V+ NS +  L   G  + A  
Sbjct: 332 QPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAE 391

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +   M  K   PD  +Y  L  G    G       L N +    +  D   +NILI+   
Sbjct: 392 IFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYA 451

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A  + + M  +G+ PD++TY T+I  + + G +  A++ +  M     +PN  
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 501 IYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           +Y+SII G C    L  AK L+    ++ I   D + +N++IN    +G++ +A  +F  
Sbjct: 512 VYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDL 571

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           + ++G   + + +  LI+  C  G   +A +++  M + G+  D VTY+TL+  + KN  
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             + + L  +M   GV P+  TY  +++ L 
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 195/393 (49%), Gaps = 6/393 (1%)

Query: 259 NEACQVGDLEFALKLFRKM-GVMSGDSVLPNSV-THNCIINGFCKLGRVEFAEEIRYAMI 316
           + AC       AL LF ++    +G  V+P +V T++ +++  C+  R +    +   ++
Sbjct: 125 SSACITDGPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCIL 184

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALR-LCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + G+  +  T +TL+        +EEA+  L   M + G +PN   Y+  +  L      
Sbjct: 185 RTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMS 244

Query: 376 EGALFVLSDMIDK--HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           + AL +   M  +     P+   Y+ +  G  + G   +A  L +++  + +  D  +YN
Sbjct: 245 QRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ++I+ LCK+  +  A+ +L  M   G  PD +TY  +I GY   G ++ A +++  MK  
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSR 364

Query: 494 EKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEA 552
              PN+VI NS +  LCK   S +AA+     + +    D ++Y TL++GY   G  A+ 
Sbjct: 365 GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADM 424

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F+ M++ GIA +   +NILI+   K G    A  +   M   G+ PD VTY+T+++ 
Sbjct: 425 IGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISA 484

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           FS+     + +E  + MV  G+ P+   Y++II
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 218/474 (45%), Gaps = 11/474 (2%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G ++ A ++   +  KGH   I ++   L              L+  M S G   +   F
Sbjct: 384 GRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I+A  K   +++A+ ++  M + G+ P+VV ++ +I+   ++G L  A++ F +M V
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQM-V 502

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID-CNVRTYATLIDGYARGG 338
             G  + PN+  ++ II GFC  G +  A+E+   MI  GI   ++  + ++I+   + G
Sbjct: 503 ARG--IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDG 560

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              +A  + D +   G  P+ + + S I      G ++ A  +L  M    +  D  TYS
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G  +NG +     L  ++  + +  +  +Y I++  L ++    AA++    MI  
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G    +  YG ++ G C+    + A+ +++ +  +  K ++ I N++IN + K    + A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K L       GLL +  TY  +I     +G + +A  MFS M   GI       N +I  
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRM 800

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           L + G   +A   +  +    I+ +  T + +++ FS+        + H+DM L
Sbjct: 801 LLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKG------KYHEDMKL 848


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 272/570 (47%), Gaps = 26/570 (4%)

Query: 84  VGENNRFSHSLESSCAIVHLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           V E  R  H  E+   +V   V      RRFDDA+ L+ N ++   V             
Sbjct: 112 VREMRREGH--EAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGV------------- 156

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
              +A  AV++ L+    +    +    V  ++  +G    +   N  +  L + +++  
Sbjct: 157 ---QADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRT 213

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              + +EM S     +  TF  ++    +E  +E AL +  +M+++G  P  V  N++IN
Sbjct: 214 AVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLIN 273

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C++G +E AL   +K      D   P+ VT+N  ++  C+ G V  A ++   M++ G
Sbjct: 274 GYCKMGRVEDALGYIQKE---IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            D +V TY T+I+  ++ G  +EA  + ++MV RG +P+   +N+ I  L ++  +E AL
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +  ++  K + PD +T++IL   LC+ G      +L  ++       D  +YNILI++L
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C    L  A  LL  M   G     +TY T+ID  CK   IE A +V++ M       + 
Sbjct: 451 CSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSA 510

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSE 558
           V +N++I+GLCK   +D A  L++   + GL  + ITYN+++  Y   G + +A  +   
Sbjct: 511 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILET 570

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G  ++ V Y  LIN LCK G  Q A +L++ M + GI P    Y  ++    +  +
Sbjct: 571 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 630

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + + L  +M   G  PD  TY  +   L
Sbjct: 631 LRDALSLFREMTEVGEPPDALTYKIVFRGL 660



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 265/540 (49%), Gaps = 6/540 (1%)

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           D   LL      A+  + L+ L   L + E    + AV++ +++     GA +    +++
Sbjct: 55  DQDRLLTALREQADPEAALQMLNSAL-AREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVR 113

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK-EMVSCGYVENVNTFNLVIYALCKE 229
           +++ +GH        +F+    +L        L + ++ + G   +   +N ++  L + 
Sbjct: 114 EMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEG 173

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +++   S+Y  M   GI P+VV  N +I   C+   +  A+ +  +   MS  +V P+ 
Sbjct: 174 SRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEE---MSSHAVAPDE 230

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T   ++ GF + G +E A  ++  M++ G      T   LI+GY + G  E+AL    +
Sbjct: 231 TTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQK 290

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
            +  G  P+ V YN+ +H L   G V  AL V+  M+ +   PD FTY+ +   L +NG 
Sbjct: 291 EIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           + +A  + NQ+++   + D  ++N LI  LC  N L  A  L   + V+GL PD+ T+  
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+  CK G+    ++++E MK     P+ V YN +I+ LC    L  A  LL+  +  G
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
                +TYNT+I+      +I EA  +F +M   GI+ + V +N LI+ LCK      A 
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           EL++ M+  G+ P  +TY +++T + K    ++  ++ + M  +G   D  TY  +I+ L
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 263/536 (49%), Gaps = 7/536 (1%)

Query: 125 SVSPLEFLEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQ-KLKVKGHSVSI 181
           +    + +EGL+     E  +A   V  + V +  ++   + A D+++ +L   G     
Sbjct: 101 TAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADT 160

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             +N+ L+ L + + +     +Y EM   G   +V T N +I ALC+  ++  A+ +   
Sbjct: 161 AVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEE 220

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M    + P+   F  ++    + G +E AL++  KM + +G S  P  VT N +ING+CK
Sbjct: 221 MSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKM-METGCS--PTRVTVNVLINGYCK 277

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +GRVE A       I  G + +  TY T +    + G    AL++ D M++ G  P+   
Sbjct: 278 MGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFT 337

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I+ L   G+++ A  +++ M+D+   PD  T++ L   LC    +++A  L  ++ 
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELT 397

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
            + +  D Y++NILIN LCK  +     +L   M   G  PD +TY  LID  C  G + 
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A+ + + M+      + V YN+II+ LCK   ++ A+ +       G+   A+T+NTLI
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G     +I +A  +  +M   G+  + + YN ++   CK G  ++A ++++ M  +G  
Sbjct: 518 DGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFE 577

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            D VTY TL+    K    +  ++L   M + G+ P  + YN +I  L    +  D
Sbjct: 578 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 633



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 173/374 (46%), Gaps = 35/374 (9%)

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           D +E  + T   ++  V    Q G    A  V+  +  +GH   +  +N  ++ L K  E
Sbjct: 294 DGFEPDQVT---YNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           +     +  +MV  G + +  TFN +I ALC + +LEEAL L   +   G+ P+V  FN+
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 257 IINEACQVGDLEFALKLFRKMGV--------------------------------MSGDS 284
           +IN  C+VGD    ++LF +M                                  M  + 
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
              ++VT+N II+  CK  R+E AEE+   M   GI  +  T+ TLIDG  +    ++A 
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L ++MVK GL P+N+ YNS +     +GD++ A  +L  M       D  TY  L  GL
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G  + A KL   +  + +     +YN +I  L + NNL  A  L   M   G  PD 
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 465 ITYGTLIDGYCKGG 478
           +TY  +  G C+GG
Sbjct: 651 LTYKIVFRGLCRGG 664



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 160/309 (51%), Gaps = 7/309 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+ A  ++G       + +++K  G +     +N  + HL  + ++     L KEM
Sbjct: 407 TFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEM 466

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   +  T+N +I ALCK+ ++EEA  ++ +M   GI  + V FN +I+  C+   +
Sbjct: 467 ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRI 526

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A +L  +M     + + P+++T+N I+  +CK G ++ A +I   M   G + +V TY
Sbjct: 527 DDATELIEQM---VKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTY 583

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+G  + G ++ AL+L   M  +G+ P    YN  I  LF   ++  AL +  +M +
Sbjct: 584 GTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTE 643

Query: 388 KHICPDHFTYSILTKGLCR-NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
               PD  TY I+ +GLCR  G +K+AF    +++ +  + +  S+ +L   L    NL 
Sbjct: 644 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLL---NLG 700

Query: 447 AAKQLLSSM 455
               L+S++
Sbjct: 701 MDDYLISAI 709


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/518 (30%), Positives = 255/518 (49%), Gaps = 32/518 (6%)

Query: 144 ATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            +P VF    +++A       + A  +++ +   G   +   +   +  L + N++    
Sbjct: 214 VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEAL 273

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL +EM   G + +V TFN VI+ LCK  K+ +A  L  RML  G +P+ + +  +++  
Sbjct: 274 KLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333

Query: 262 CQVGDLEFALKLFRKMG--------------VMSGD---------------SVLPNSVTH 292
           C++G L  A K+  K+               VMSG                   P+  T+
Sbjct: 334 CRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTY 393

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++G CK G + FA ++   M + G + NV TYA L++G  + G  EEA  +  EM  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RGL  N+V+YN  I  L  +  V  AL +LS+M  K   PD FTY+ L  GLC+   + +
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF+L + +L +  V +  +YN LI+ L +      A  L++ M+ RG   D ITY  LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
            +CK GNIE  +++YE M       + +  N +INGLCK   +D A   L+ +   G + 
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D +TYN+++NG    G+I EA  +F  ++  G+  +   YN  I++ CK G    A    
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFF 693

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
              I +G +P  +T+  LV    K  + E    + D++
Sbjct: 694 YRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 264/525 (50%), Gaps = 13/525 (2%)

Query: 127 SPLEFLEGLLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
            P + +  LLD  +  +C+ T   +D ++         + A +V   +  KG S ++  +
Sbjct: 162 QPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTF 221

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
              +  L   NE+     L ++M   G V N   +  +I+AL ++ ++ EAL L   M  
Sbjct: 222 GIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFV 281

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G  P+V  FN +I+  C+V  +  A KL  +M ++ G    P+++T+  +++G C++G+
Sbjct: 282 MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM-LLRG--FYPDNMTYGFLLHGLCRIGK 338

Query: 305 VEFAEEIRYAMIKAGIDC-NVRTYATLIDGYARGGSSEEALRLCDE-MVKRGLMPNNVVY 362
           +    E R  +IK  I C N     TLI+GY   G  +EA    +E M+  G  P+   Y
Sbjct: 339 LN---EARKILIK--IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTY 393

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  +H L  EG +  A  ++++M  +   P+  TY+IL  GLC+ G +++A  + +++  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +  ++  YN LI  LC+   +  A  LLS M  +G  PD+ TY +LI G CK   I+ 
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLIN 541
           A +++ NM       N V YN++I+ L +  +   A +L+      G  LD ITYN LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            +   G I +   ++ +M   G+  + +  NI+IN LCK G    A E ++  I  G +P
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           D VTY +++    K    +E + L D + + GV PD  TYN  IS
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 246/508 (48%), Gaps = 15/508 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKL----KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            FD       ++GA  G + +I KL    K +G       +   + H  K  + G+  +L
Sbjct: 111 TFDVYYVFINKLGAI-GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRL 169

Query: 204 YKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
             +M +    E    +++LV+  L      + A +++Y ML  G+ P V  F +++   C
Sbjct: 170 LLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALC 229

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
              +++ A  L R M   +    +PNS+ +  +I+   +  +V  A ++   M   G   
Sbjct: 230 MFNEVDSACSLLRDM---TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMP 286

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V+T+  +I G  +     +A +L D M+ RG  P+N+ Y   +H L   G +  A  +L
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCK 441
                K  CP++   + L  G   +G +K+A    N+ +       D ++YNIL++ LCK
Sbjct: 347 I----KIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             +L+ A+ L++ M  RG  P++ITY  L++G CK G +E A  V   M       N VI
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +I  LC+   +  A +LL      G   D  TYN+LI G     +I EAF +F  M 
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G   N V YN LI+ L + G +Q+A  L+  M+  G   D +TY  L+  F K  + E
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIE 582

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + +EL++ M++ G+  D  + N +I+ L
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGL 610



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 203/449 (45%), Gaps = 24/449 (5%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY    + + + I  L    K +    L  +M + GI      F +I+    + G    A
Sbjct: 107 GYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQA 166

Query: 271 LKLFRKMGVM--------SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++L   M  +        S D VL   VT NC           + A  + Y M+  G+  
Sbjct: 167 IRLLLDMRAVYLCEPTFKSYDLVLEILVTGNC----------PQVATNVFYDMLSKGVSP 216

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V T+  ++         + A  L  +M K G +PN++VY + IH L  +  V  AL +L
Sbjct: 217 TVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLL 276

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M      PD  T++ +  GLC+   +  A KL +++L      D  +Y  L++ LC+ 
Sbjct: 277 EEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRI 336

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ-VYENMKKVEKKPNLVI 501
             L  A+++L    ++   P+     TLI+GY   G ++ A   + E M     +P++  
Sbjct: 337 GKLNEARKIL----IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFT 392

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +++GLCK+ SL  A+ L+    R G   + ITY  L+NG    G + EA  +  EM 
Sbjct: 393 YNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMS 452

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+ +N V YN LI  LC+      A  L+  M   G  PD  TY +L+    K    +
Sbjct: 453 ARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRID 512

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           E   L  +M+L G   +N TYN +I  LL
Sbjct: 513 EAFRLFHNMLLDGAVANNVTYNTLIHALL 541



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           VY   I+ L A G  +    +L  M ++ I      + I+ K   + G   QA +L   +
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 421 LEEHMVGDAY-SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
              ++    + SY++++  L   N    A  +   M+ +G+ P + T+G ++   C    
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A  +  +M K    PN ++Y ++I+ L +   +  A  LL+    +G + D  T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I+G     KI +A  +   M   G   + + Y  L++ LC+ G   +AR+++    +  
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKI 349

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIE-LHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
             P+     TL+  +  +   +E    L++ M+  G  PD  TYN ++  L  E S
Sbjct: 350 PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 107/216 (49%), Gaps = 21/216 (9%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLM----SANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
           ++++ L    R D+A  L  N++     AN+V+    +  LL      KA   V D L R
Sbjct: 500 SLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFR 559

Query: 155 ACT--------------QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
            CT              ++G  E   ++ +++ + G      + N  ++ L K+ ++   
Sbjct: 560 GCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA 619

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++  ++ ++ G+V ++ T+N V+  LCK  +++EAL+L+ R+   G+ P+   +N  I+ 
Sbjct: 620 FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISW 679

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            C+ G +  A   F + G+ +G   +P+++T N ++
Sbjct: 680 QCKEGMVNDACSFFYR-GIENG--FVPSNLTWNVLV 712


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/538 (29%), Positives = 251/538 (46%), Gaps = 69/538 (12%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF---------------- 219
           G+   +H++N+ L  LVK     R  K+YK+++  G   N+ TF                
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 220 -------------------NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
                              N++I+ L K+   ++A+ L+  M  S + P +V +N +I+ 
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G+LE A +L  +M +  G    P+ VT+N +IN F +  R+  A   R  M  AGI
Sbjct: 142 LCKSGNLEKARELLEEM-IRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV----- 375
           + +V T   L+ G  + G  EEAL + D M   G +P+ + YNS IH L   G V     
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260

Query: 376 ---------------------------EGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
                                        AL VL +M  ++I PD  TY+IL  GLCR G
Sbjct: 261 ILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V+ AF L  +++ +  + D  +Y  L++ LCKS  +  A +L+  M VRG    ++ Y 
Sbjct: 321 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYS 380

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +L+ GYC+ GN+  A ++   M  +   P L  YN ++ GL KD S+  A SL+      
Sbjct: 381 SLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 440

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + D +TYNTLI+G     ++ EA  +  EM + G   N V    ++  LC+ G    A
Sbjct: 441 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDA 500

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             L+  M      P+ V YT+L+    K+   ++   + D M   GV+ D+  Y  +I
Sbjct: 501 WSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLI 558



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/588 (26%), Positives = 287/588 (48%), Gaps = 54/588 (9%)

Query: 74  PKLALEFYTWVGENNRFSHSLESSCAIVHLLV-------NWRRFDDAL------------ 114
           P LA++F+ W GE + + H + S   ++ +LV         + + D L            
Sbjct: 7   PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFK 66

Query: 115 -LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
            L+ GN  +  ++  LEFL  L D + +      +F+ L+    + G  + A  + + ++
Sbjct: 67  ILIRGNCKAGQAMRALEFLRAL-DEFSVAPDV-YIFNVLIHGLFKDGNPDQAVKLFENME 124

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG--YVENVNTFNLVIYALCKECK 231
                  I  +N  +S L K   + +  +L +EM+  G     ++ T+N +I A  +  +
Sbjct: 125 SSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASR 184

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-------GVMSGDS 284
           + EA +   +M  +GI P+V+  N++++  C+ GD+E AL++   M        V++ +S
Sbjct: 185 IREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNS 244

Query: 285 VL----------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++                      P+ VT N +++GFCK G +  A E+   M +  I  
Sbjct: 245 IIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 304

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY  L++G  R G  + A  L +E+V++G +P+ + Y S +  L   G++E A  ++
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  +        YS L  G CR G V +A ++  +++  +MV   ++YNI++  L K 
Sbjct: 365 KEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKD 424

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +++ A  L+S ++ RG +PD++TY TLIDG CK   +  A  + + M      PN V  
Sbjct: 425 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTL 484

Query: 503 NSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            S++ GLC+   +D A SL+ + S++    + + Y +LI+G   + ++ +A  +   MR 
Sbjct: 485 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRG 544

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            G+A++   Y  LI  +   G   +A  +   M+  G +PD  T  TL
Sbjct: 545 QGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 227/441 (51%), Gaps = 9/441 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  +V+++N ++  L K         +Y  +L SG  PN+V F ++I   C+ G    A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+  R +   S   V P+    N +I+G  K G  + A ++   M  + +   + TY T+
Sbjct: 82  LEFLRALDEFS---VAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 331 IDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           I G  + G+ E+A  L +EM+++G    P+ V YN+ I+  +    +  A      M   
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I PD  T +IL  G+C++G V++A ++ + +     V D  +YN +I+ LC +  +  A
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            ++L +M      PD++T+ TL+DG+CK G +  A++V E M +    P+++ Y  ++NG
Sbjct: 259 AEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC+   +  A  LL+   R G + D I Y +L++G   +G+I EA  +  EM   G    
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTG 375

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y+ L++  C+ G   +ARE++  M+   ++P   TY  ++    K+ S  + + L  
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 435

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           D+V  G  PD  TYN +I  L
Sbjct: 436 DLVARGYVPDVVTYNTLIDGL 456



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 191/375 (50%), Gaps = 6/375 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN VT   +I G CK G+   A E   A+ +  +  +V  +  LI G  + G+ ++A++L
Sbjct: 60  PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HICPDHFTYSILTKGL 404
            + M    + P  V YN+ I  L   G++E A  +L +MI K     PD  TY+ L    
Sbjct: 120 FENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAF 179

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            R   +++A     ++    +  D  + NIL++ +CK  ++  A ++L  M + G +PD+
Sbjct: 180 YRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDV 239

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           ITY ++I   C  G +   V+  E +K +   P+LV +N++++G CK   L  A  +L+ 
Sbjct: 240 ITYNSIIHALCVAGKV---VEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEE 296

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             R  +L D ITY  L+NG    G++  AF +  E+   G   + + Y  L++ LCK G 
Sbjct: 297 MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 356

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A +L+K M + G     V Y++LV+ + +  +  +  E+  +MV   + P   TYN 
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416

Query: 644 IISPLLGEKSAEDQV 658
           ++  L+ + S    V
Sbjct: 417 VLGGLIKDGSISKAV 431



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 3/259 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + +LV    + G  E A+ +++++ V+G    +  +++ +S   +   + +  ++  EMV
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S   V  + T+N+V+  L K+  + +A+SL   ++  G  P+VV +N +I+  C+   + 
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L  +M   +     PN VT   ++ G C++GRV+ A  +   M +     NV  Y 
Sbjct: 464 EACDLADEM---ASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYT 520

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LIDG  +    ++A  + D M  +G+  ++  Y   I  +   G V  A+ +  +M+ +
Sbjct: 521 SLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVAR 580

Query: 389 HICPDHFTYSILTKGLCRN 407
              PD  T   L +    N
Sbjct: 581 GFLPDGSTSKTLEEAAMSN 599


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 247/509 (48%), Gaps = 33/509 (6%)

Query: 180  SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
            SI  ++  LS + K+N+      L ++M + G   N  T++++I   C+  +L  AL++ 
Sbjct: 694  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 753

Query: 240  YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV-------------------- 279
             +M+K G  PN+V  + ++N  C    +  A+ L  +M V                    
Sbjct: 754  GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 813

Query: 280  ------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                        M      P+ VT+  ++NG CK G  + A  +   M +  ++  V  Y
Sbjct: 814  NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 873

Query: 328  ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             T+IDG  +    ++AL L  EM  +G+ PN V Y+S I  L   G    A  +LSDMI+
Sbjct: 874  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933

Query: 388  KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            + I PD FT+S L     + G + +A KL++++++  +     +Y+ LIN  C  + L  
Sbjct: 934  RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            AKQ+   M+ +   PD++TY TLI G+CK   +E  ++V+  M +     N V YN +I 
Sbjct: 994  AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053

Query: 508  GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            GL +    D A+ + +     G+   I TYNTL++G   NGK+ +A  +F  ++   +  
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113

Query: 567  NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
                YNI+I  +CK G  +   +L   + L G+ PD V Y T+++ F +  S EE   L 
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173

Query: 627  DDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             +M   G  P++  YN +I   L +   E
Sbjct: 1174 KEMKEDGTLPNSGCYNTLIRARLRDGDRE 1202



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 233/442 (52%), Gaps = 4/442 (0%)

Query: 165  AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            A  ++ ++ V G+  +   +N  +  L   N+      L   MV+ G   ++ T+ +V+ 
Sbjct: 784  AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 843

Query: 225  ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             LCK    + A +L  +M +  + P V+ +N II+  C+   ++ AL LF++M       
Sbjct: 844  GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM---ETKG 900

Query: 285  VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
            + PN VT++ +I+  C  GR   A  +   MI+  I+ +V T++ LID + + G   EA 
Sbjct: 901  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 960

Query: 345  RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            +L DEMVKR + P+ V Y+S I+       ++ A  +   M+ KH  PD  TY+ L KG 
Sbjct: 961  KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 1020

Query: 405  CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            C+   V++  ++  ++ +  +VG+  +YNILI  L ++ +   A+++   M+  G+ P+I
Sbjct: 1021 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 1080

Query: 465  ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            +TY TL+DG CK G +E A+ V+E +++ + +P +  YN +I G+CK   ++    L   
Sbjct: 1081 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 1140

Query: 525  SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
                G+  D + YNT+I+G+   G   EA A+F EM+  G   N   YN LI    + G 
Sbjct: 1141 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 1200

Query: 584  YQQARELMKVMILHGIIPDYVT 605
             + + EL+K M   G   D  T
Sbjct: 1201 REASAELIKEMRSCGFAGDAST 1222



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 269/599 (44%), Gaps = 95/599 (15%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK---LNEIGRFW--- 201
             +  ++R   + G  E A+ +   L +KG    I  +   +S L     L+E+   +   
Sbjct: 540  TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 599

Query: 202  ---------------------KLYKEMVSCGYVENVNTFNLVIYALCK------------ 228
                                 +L K+M+SCGY  ++     +   +CK            
Sbjct: 600  KQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSL--LKDIKSGVCKKALSLLRAFSGK 657

Query: 229  ---------------ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
                           E KL++A++L+  M+KS  +P+++ F+ +++   ++   +  + L
Sbjct: 658  TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 717

Query: 274  FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
              +M  +    +  N  T++ +IN FC+  ++  A  +   M+K G + N+ T ++L++G
Sbjct: 718  GEQMQNLG---IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 774

Query: 334  YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
            Y       EA+ L D+M   G  PN V +N+ IH LF       A+ ++  M+ K   PD
Sbjct: 775  YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 834

Query: 394  HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL-------- 445
              TY ++  GLC+ G    AF L N++ +  +      YN +I+ LCK  ++        
Sbjct: 835  LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 894

Query: 446  ---------------------------AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
                                       + A +LLS MI R + PD+ T+  LID + K G
Sbjct: 895  EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954

Query: 479  NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYN 537
             +  A ++Y+ M K    P++V Y+S+ING C    LD AK + +    +    D +TYN
Sbjct: 955  KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 1014

Query: 538  TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            TLI G+    ++ E   +F EM   G+  N V YNILI  L + G    A+E+ K M+  
Sbjct: 1015 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 1074

Query: 598  GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G+ P+ +TY TL+    KN   E+ + + + +  S + P   TYN +I  +      ED
Sbjct: 1075 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 1133



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 236/485 (48%), Gaps = 4/485 (0%)

Query: 165  AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            A  V+ K+   G+  +I   ++ L+       I     L  +M   GY  N  TFN +I+
Sbjct: 749  ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 808

Query: 225  ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             L    K  EA++L  RM+  G  P++V + +++N  C+ GD + A  L  KM       
Sbjct: 809  GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM---EQGK 865

Query: 285  VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
            + P  + +N II+G CK   ++ A  +   M   GI  NV TY++LI      G   +A 
Sbjct: 866  LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925

Query: 345  RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            RL  +M++R + P+   +++ I     EG +  A  +  +M+ + I P   TYS L  G 
Sbjct: 926  RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 985

Query: 405  CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            C +  + +A ++   ++ +H   D  +YN LI   CK   +    ++   M  RGL+ + 
Sbjct: 986  CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045

Query: 465  ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            +TY  LI G  + G+ + A ++++ M      PN++ YN++++GLCK+  L+ A  + + 
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105

Query: 525  SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             QR  +   I TYN +I G    GK+ + + +F  +   G+  + V YN +I+  C+ G 
Sbjct: 1106 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 1165

Query: 584  YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             ++A  L K M   G +P+   Y TL+    ++   E   EL  +M   G + D  T   
Sbjct: 1166 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 1225

Query: 644  IISPL 648
            + + L
Sbjct: 1226 VTNML 1230



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 216/429 (50%), Gaps = 4/429 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS +VKL +      L K+M   G   ++ TFN+VI   C   ++  ALS+ 
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 246

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +MLK G  P+ V    ++N  C+   +  A+ L  KM  +      P+ V +N II+  
Sbjct: 247 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI---GYKPDIVAYNAIIDSL 303

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK  RV  A +    + + GI  NV TY  L++G        +A RL  +M+K+ + PN 
Sbjct: 304 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 363

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y++ +      G V  A  +  +M+   I PD  TYS L  GLC +  + +A ++ + 
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +  + D  SYN LIN  CK+  +    +L   M  RGL+ + +TY TLI G+ + G+
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A + +  M      P++  YN ++ GLC +  L+ A  + +  Q+  + LD +TY T
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G    GK+ EA+++F  +   G+  + V Y  +++ LC  G   +   L   M   G
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603

Query: 599 IIPDYVTYT 607
           ++ +  T +
Sbjct: 604 LMKNDCTLS 612



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 222/422 (52%), Gaps = 4/422 (0%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ KL +A+ L+  M+KS  +P++V FN +++   ++   +  + L +KM V+    +  
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL---GIRN 221

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T N +IN FC   +V  A  I   M+K G + +  T  +L++G+ R     +A+ L 
Sbjct: 222 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 281

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D+MV+ G  P+ V YN+ I  L     V  A     ++  K I P+  TY+ L  GLC +
Sbjct: 282 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 341

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
                A +L + ++++ +  +  +Y+ L++   K+  +  AK+L   M+   + PDI+TY
Sbjct: 342 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 401

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQ 526
            +LI+G C    I+ A Q+++ M       ++V YN++ING CK   + D  K   + SQ
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R  + + +TYNTLI G+F  G + +A   FS+M   GI+ +   YNIL+  LC  G  ++
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  + + M    +  D VTYTT++    K    EE   L   + L G+ PD  TY  ++S
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 581

Query: 647 PL 648
            L
Sbjct: 582 GL 583



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 226/450 (50%), Gaps = 7/450 (1%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           +KLN+      L+ +MV      ++  FN ++ A+ K  K +  +SL  +M   GI  ++
Sbjct: 167 IKLNDA---IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 223

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN++IN  C    +  AL +  KM  +  +   P+ VT   ++NGFC+  RV  A  +
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKMLKLGYE---PDRVTIGSLVNGFCRRNRVSDAVSL 280

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M++ G   ++  Y  +ID   +     +A     E+ ++G+ PN V Y + ++ L  
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
                 A  +LSDMI K I P+  TYS L     +NG V +A +L  +++   +  D  +
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+ LIN LC  + +  A Q+   M+ +G + D+++Y TLI+G+CK   +E  ++++  M 
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           +     N V YN++I G  +   +D A+         G+  D  TYN L+ G   NG++ 
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 520

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A  +F +M+   + ++ V Y  +I  +CK G  ++A  L   + L G+ PD VTYTT++
Sbjct: 521 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           +         EV  L+  M   G+  ++ T
Sbjct: 581 SGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 212/412 (51%), Gaps = 3/412 (0%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            C+     +  +V    + G T+ A++++ K++       +  +N  +  L K   +    
Sbjct: 831  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 890

Query: 202  KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I P+V  F+ +I+  
Sbjct: 891  NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 950

Query: 262  CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
             + G L  A KL+ +M   S D   P+ VT++ +INGFC   R++ A+++   M+     
Sbjct: 951  VKEGKLVEAEKLYDEMVKRSID---PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 1007

Query: 322  CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             +V TY TLI G+ +    EE + +  EM +RGL+ N V YN  I  LF  GD + A  +
Sbjct: 1008 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 1067

Query: 382  LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              +M+   + P+  TY+ L  GLC+NG +++A  +   +    M    Y+YNI+I  +CK
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 1127

Query: 442  SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +     L  ++ ++G+ PD++ Y T+I G+C+ G+ E A  +++ MK+    PN   
Sbjct: 1128 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 1187

Query: 502  YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
            YN++I    +D   +A+  L++  +  G     +   L+     +G++ ++F
Sbjct: 1188 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 1239



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 215/420 (51%), Gaps = 4/420 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+ A  ++   +    + +K++V G    ++ +N  ++      ++     +  +M+
Sbjct: 191 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 250

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY  +  T   ++   C+  ++ +A+SL  +M++ G  P++V +N II+  C+   + 
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 310

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A   F+++       + PN VT+  ++NG C   R   A  +   MIK  I  NV TY+
Sbjct: 311 DAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 367

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+D + + G   EA  L +EMV+  + P+ V Y+S I+ L     ++ A  +   M+ K
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  +Y+ L  G C+   V+   KL  ++ +  +V +  +YN LI    ++ ++  A
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 487

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++  S M   G+ PDI TY  L+ G C  G +E A+ ++E+M+K E   ++V Y ++I G
Sbjct: 488 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 547

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +CK   ++ A SL  +    GL  D +TY T+++G    G + E  A++++M+  G+  N
Sbjct: 548 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 607



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 247/558 (44%), Gaps = 56/558 (10%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C A    ++ L+    +    E    + +++  +G   +   +N  +    +  ++ +  
Sbjct: 429 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 488

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + + +M   G   ++ T+N+++  LC   +LE+AL ++  M K  +  ++V +  +I   
Sbjct: 489 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 548

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI- 320
           C+ G +E A  LF  + +     + P+ VT+  +++G C  G +   E +   M + G+ 
Sbjct: 549 CKTGKVEEAWSLFCSLSL---KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 605

Query: 321 --DC-----NVRTYATLID-----GYA--------------------------------- 335
             DC     ++   A LI      GYA                                 
Sbjct: 606 KNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREK 665

Query: 336 --RGGSSE----EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
             R G SE    +A+ L  EMVK    P+ + ++  +  +      +  + +   M +  
Sbjct: 666 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 725

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I  +H+TYSIL    CR   +  A  +  ++++     +  + + L+N  C S  ++ A 
Sbjct: 726 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 785

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            L+  M V G  P+ +T+ TLI G         A+ + + M     +P+LV Y  ++NGL
Sbjct: 786 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845

Query: 510 CKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK    D A +LL   ++  L   +  YNT+I+G      + +A  +F EM   GI  N 
Sbjct: 846 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V Y+ LI+ LC +G +  A  L+  MI   I PD  T++ L+  F K     E  +L+D+
Sbjct: 906 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965

Query: 629 MVLSGVSPDNQTYNAIIS 646
           MV   + P   TY+++I+
Sbjct: 966 MVKRSIDPSIVTYSSLIN 983



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 247/559 (44%), Gaps = 56/559 (10%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     ++A++ +  +      A+D  ++++ KG   ++  +   ++ L   +      +
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  +M+      NV T++ ++ A  K  K+ EA  L+  M++  I P++V ++ +IN  C
Sbjct: 350 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 409

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
               ++ A ++F    +M     L + V++N +INGFCK  RVE   ++   M + G+  
Sbjct: 410 LHDRIDEANQMF---DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY TLI G+ + G  ++A     +M   G+ P+   YN  +  L   G++E AL + 
Sbjct: 467 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 526

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM  + +  D  TY+ + +G+C+ G V++A+ L   +  + +  D  +Y  +++ LC  
Sbjct: 527 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 586

Query: 443 NNLAAAKQLLSSMIVRGLIP--------DIITYGTLI-----------------DGYCKG 477
             L   + L + M   GL+         DI     LI                  G CK 
Sbjct: 587 GLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKK 646

Query: 478 G---------------------------NIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
                                        ++ AV ++  M K    P+++ ++ +++ + 
Sbjct: 647 ALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA 706

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K    D   SL +  Q +G+  +  TY+ LIN +    ++  A A+  +M  +G   N V
Sbjct: 707 KMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIV 766

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
             + L+N  C      +A  L+  M + G  P+ VT+ TL+     +    E + L D M
Sbjct: 767 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 826

Query: 630 VLSGVSPDNQTYNAIISPL 648
           V  G  PD  TY  +++ L
Sbjct: 827 VAKGCQPDLVTYGVVVNGL 845



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 1/250 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L+K   R+  +  A  L + +++         +N L++ + K         L   M V G
Sbjct: 159 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 218

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  D+ T+  +I+ +C    +  A+ +   M K+  +P+ V   S++NG C+   +  A 
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           SL+     IG   D + YN +I+      ++ +AF  F E+   GI  N V Y  L+N L
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C    +  A  L+  MI   I P+ +TY+ L+  F KN    E  EL ++MV   + PD 
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398

Query: 639 QTYNAIISPL 648
            TY+++I+ L
Sbjct: 399 VTYSSLINGL 408



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ--QARELM 591
           + +N L++      K     ++  +M  +GI  +   +NI+IN  C   C+Q   A  ++
Sbjct: 189 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC--CCFQVSLALSIL 246

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M+  G  PD VT  +LV  F +     + + L D MV  G  PD   YNAII  L   
Sbjct: 247 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 306

Query: 652 KSAED 656
           K   D
Sbjct: 307 KRVND 311


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 253/468 (54%), Gaps = 4/468 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           +++  ++   K  ++ + +  Y EM+      NV T+N +I ALCK   +++A+ +   M
Sbjct: 90  SYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           +KSG+ P+ + +N I++  C  G  + A+   +KM     D V P+ VT+N +++  CK 
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM---RSDGVEPDVVTYNSLMDYLCKN 206

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GR   A +I  +M K G+   + TY TL+ GYA  G+  E   L D MV+ G+ PN+ V+
Sbjct: 207 GRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           +  +     +  VE A+ V S M  + + P+  TY  +   LC++G V+ A     Q+++
Sbjct: 267 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 326

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           E +      YN LI+ LC  N    A++L+  M+ RG+  + I + ++ID +CK G +  
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           + ++++ M ++  KP+++ Y+++I+G C    +D A  LL +   +G+  D +TY+TLIN
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           GY    ++ +A  +F EM + G++ + + YNI++  L +      A+EL   +   G   
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +  TY  ++    KN   ++ + +  ++ L  +  + +T+N +I  LL
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 554



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 261/548 (47%), Gaps = 4/548 (0%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F   +LL G      S   LE L  + D    C      +  ++    + G  +  Y   
Sbjct: 52  FSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTY 111

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            ++  +  S ++  +N+ ++ L K   + +  ++   MV  G + +  T+N +++  C  
Sbjct: 112 NEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSS 171

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            + +EA+    +M   G+ P+VV +N +++  C+ G    A K+F     M+   + P  
Sbjct: 172 GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS---MTKRGLKPEI 228

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+  ++ G+   G +     +   M++ GI  N   ++ L+  YA+    EEA+ +  +
Sbjct: 229 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 288

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M ++GL PN V Y + I  L   G VE A+     MID+ + P +  Y+ L  GLC    
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 348

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            ++A +L  ++L+  +  +   +N +I+  CK   +  +++L   M+  G+ PDIITY T
Sbjct: 349 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 408

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDGYC  G ++ A ++  +M  V  KP+ V Y+++ING CK + +  A  L +  +  G
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D ITYN ++ G F   + A A  ++  +   G  +    YNI+++ LCK      A 
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDAL 528

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            + + + L  +  +  T+  ++    K    +E  +L      +G+ P+  TY  +   +
Sbjct: 529 RMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 588

Query: 649 LGEKSAED 656
           +G+   E+
Sbjct: 589 IGQGLLEE 596



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 242/497 (48%), Gaps = 7/497 (1%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY--VENVNTFN 220
           E A  V  +L  +G    + ++N  L+ L   N      +L   M   G     +V +++
Sbjct: 34  EDARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            VI    KE  L++  S Y  ML   I PNVV +N II   C+   ++ A+++   M V 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM-VK 151

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           SG  V+P+ +T+N I++GFC  G+ + A      M   G++ +V TY +L+D   + G  
Sbjct: 152 SG--VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
            EA ++ D M KRGL P    Y + +     +G +     +L  M+   I P+H+ +SIL
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
                +   V++A  + +++ ++ +  +A +Y  +I  LCKS  +  A      MI  GL
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P  I Y +LI G C     E A ++   M       N + +NSII+  CK+  +  ++ 
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L     RIG+  D ITY+TLI+GY + GK+ EA  + + M +VG+  + V Y+ LIN  C
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K    + A  L + M   G+ PD +TY  ++    +        EL+  +  SG   +  
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELS 509

Query: 640 TYNAIISPLLGEKSAED 656
           TYN I+  L   K  +D
Sbjct: 510 TYNIILHGLCKNKLTDD 526



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 206/436 (47%), Gaps = 4/436 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+    + G    A  +   +  +G    I  +   L        +     L   M
Sbjct: 195 TYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 254

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   N   F++++ A  K+ K+EEA+ ++ +M + G+ PN V +  +I   C+ G +
Sbjct: 255 VRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 314

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A+  F +M     + + P ++ +N +I+G C   + E AEE+   M+  GI  N   +
Sbjct: 315 EDAMLYFEQM---IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 371

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            ++ID + + G   E+ +L D MV+ G+ P+ + Y++ I      G ++ A  +L+ M+ 
Sbjct: 372 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 431

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  TYS L  G C+   +K A  L  ++    +  D  +YNI++  L ++   AA
Sbjct: 432 VGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 491

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK+L   +   G   ++ TY  ++ G CK    + A+++++N+  ++ K     +N +I+
Sbjct: 492 AKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 551

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L K    D AK L  A    GL+ +  TY  +       G + E   +F  M + G  V
Sbjct: 552 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 611

Query: 567 NKVGYNILINFLCKFG 582
           +    N ++  L + G
Sbjct: 612 DSGMLNFIVRELLQRG 627



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/355 (21%), Positives = 158/355 (44%), Gaps = 20/355 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++ +L    R +DA+L               + E ++D  E       V+++L+     
Sbjct: 303 AVIGILCKSGRVEDAML---------------YFEQMID--EGLSPGNIVYNSLIHGLCT 345

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
               E A ++I ++  +G  ++   +N+ +    K   +    KL+  MV  G   ++ T
Sbjct: 346 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 405

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++ +I   C   K++EA  L   M+  G+ P+ V ++ +IN  C++  ++ AL LFR+M 
Sbjct: 406 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREM- 464

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 V P+ +T+N I+ G  +  R   A+E+   + K+G    + TY  ++ G  +  
Sbjct: 465 --ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNK 522

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +++ALR+   +    L      +N  I  L   G  + A  +        + P+++TY 
Sbjct: 523 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 582

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           ++ + +   G +++  +L   + +     D+   N ++  L +   +  A   LS
Sbjct: 583 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 637


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 251/514 (48%), Gaps = 35/514 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS + K+N+      L ++M + G   N  T++++I   C+  +L  AL++ 
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV-------------------- 279
            +M+K G  PN+V  + ++N  C    +  A+ L  +M V                    
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199

Query: 280 ------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                       M      P+ VT+  ++NG CK G  + A  +   M +  ++  V  Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+IDG  +    ++AL L  EM  +G+ PN V Y+S I  L   G    A  +LSDMI+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I PD FT+S L     + G + +A KL++++++  +     +Y+ LIN  C  + L  
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AKQ+   M+ +   PD++TY TLI G+CK   +E  ++V+  M +     N V YN +I 
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL +    D A+ + +     G+   I TYNTL++G   NGK+ +A  +F  ++   +  
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               YNI+I  +CK G  +   +L   + L G+ PD V Y T+++ F +  S EE   L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
            +M   G  P++  YN +I   L  G++ A  ++
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 233/442 (52%), Gaps = 4/442 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++ ++ V G+  +   +N  +  L   N+      L   MV+ G   ++ T+ +V+ 
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK    + A +L  +M +  + P V+ +N II+  C+   ++ AL LF++M       
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM---ETKG 286

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + PN VT++ +I+  C  GR   A  +   MI+  I+ +V T++ LID + + G   EA 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L DEMVKR + P+ V Y+S I+       ++ A  +   M+ KH  PD  TY+ L KG 
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   V++  ++  ++ +  +VG+  +YNILI  L ++ +   A+++   M+  G+ P+I
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TL+DG CK G +E A+ V+E +++ + +P +  YN +I G+CK   ++    L   
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G+  D + YNT+I+G+   G   EA A+F EM+  G   N   YN LI    + G 
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586

Query: 584 YQQARELMKVMILHGIIPDYVT 605
            + + EL+K M   G   D  T
Sbjct: 587 REASAELIKEMRSCGFAGDAST 608



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 229/464 (49%), Gaps = 39/464 (8%)

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E KL++A++L+  M+KS  +P+++ F+ +++   ++   +  + L  +M  +    +  N
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG---IPHN 115

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T++ +IN FC+  ++  A  +   M+K G + N+ T ++L++GY       EA+ L D
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +M   G  PN V +N+ IH LF       A+ ++  M+ K   PD  TY ++  GLC+ G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL----------------------- 445
               AF L N++ +  +      YN +I+ LCK  ++                       
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295

Query: 446 ------------AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
                       + A +LLS MI R + PD+ T+  LID + K G +  A ++Y+ M K 
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEA 552
              P++V Y+S+ING C    LD AK + +    +    D +TYNTLI G+    ++ E 
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F EM   G+  N V YNILI  L + G    A+E+ K M+  G+ P+ +TY TL+  
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             KN   E+ + + + +  S + P   TYN +I  +      ED
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 236/485 (48%), Gaps = 4/485 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+  +I   ++ L+       I     L  +M   GY  N  TFN +I+
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            L    K  EA++L  RM+  G  P++V + +++N  C+ GD + A  L  KM       
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM---EQGK 251

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P  + +N II+G CK   ++ A  +   M   GI  NV TY++LI      G   +A 
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           RL  +M++R + P+   +++ I     EG +  A  +  +M+ + I P   TYS L  G 
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C +  + +A ++   ++ +H   D  +YN LI   CK   +    ++   M  RGL+ + 
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY  LI G  + G+ + A ++++ M      PN++ YN++++GLCK+  L+ A  + + 
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            QR  +   I TYN +I G    GK+ + + +F  +   G+  + V YN +I+  C+ G 
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A  L K M   G +P+   Y TL+    ++   E   EL  +M   G + D  T   
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611

Query: 644 IISPL 648
           + + L
Sbjct: 612 VTNML 616



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 212/412 (51%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G T+ A++++ K++       +  +N  +  L K   +    
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I P+V  F+ +I+  
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+ VT++ +INGFC   R++ A+++   M+     
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSID---PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY TLI G+ +    EE + +  EM +RGL+ N V YN  I  LF  GD + A  +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + P+  TY+ L  GLC+NG +++A  +   +    M    Y+YNI+I  +CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  ++ ++G+ PD++ Y T+I G+C+ G+ E A  +++ MK+    PN   
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D   +A+  L++  +  G     +   L+     +G++ ++F
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 625


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 239/436 (54%), Gaps = 5/436 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  TF +V+ + CK+ KL +   L+ +ML +GI P+ + +N++I+   + G ++ A +L+
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M V  G  + P+  T+N ++N FCK  +++ A E+   M + G + +V TY+T+I G 
Sbjct: 67  EEM-VSVG--LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 335 ARGGSSEEALR-LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
            + G   EAL  L  +M++RG   N V YN+ I+ L  + ++E A  +L +M  K   PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           + TY+ +  GLCR G V +A +  + +       D  +YN L++ L K      A +L  
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            +I +G +PD +TY +++ G  +  N++ A ++++ M      PN   Y+ +++G C+  
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  +L+   +IG + D +TYN L++G      + +A  +FS M + G A + V Y+
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           +++N LCK      AR L   MI   ++PD VT+  L+    K    +E  +L D M  S
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423

Query: 633 GVSPDNQTYNAIISPL 648
           G +PD   YN +++ L
Sbjct: 424 GCAPDYVAYNTLMNGL 439



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 240/463 (51%), Gaps = 5/463 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F  ++++  + G     Y + +++   G S     +N  +    K   +    
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +LY+EMVS G   ++ T+N ++ A CKE K++EA+ L+  M + G  P+VV ++ II+  
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 262 CQVGDLEFALK-LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           C+ G +  AL+ LF KM +  G S   N+V +N +ING CK   +E A ++   M   G 
Sbjct: 124 CKTGKVTEALEMLFHKM-IERGCSA--NTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY T++ G  R G   EA +  D M  RG  P+ V YN  +  L+ EG  + A+ 
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +  D+I K   PD  TY+ +  GL R   + +A ++  +++      +  +Y+I+++  C
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           ++  +  A ++L  M   G +PD++TY  L+DG CK   ++ A +++  M      P++V
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 360

Query: 501 IYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y+ ++NGLCK   +  A+ L  +  +R  + D +T+N L++G    GK+ EA  +  +M
Sbjct: 361 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              G A + V YN L+N L K G + QA  L + M   G + D
Sbjct: 421 TCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 228/441 (51%), Gaps = 5/441 (1%)

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S + + +   L    K  ++   +KL+++M+  G   +   +N++I    K+ +++EA  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           LY  M+  G+ P++  +N ++N  C+   ++ A++LF+    M+     P+ VT++ II+
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFK---TMAEKGFEPDVVTYSTIIS 121

Query: 298 GFCKLGRV-EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           G CK G+V E  E + + MI+ G   N   Y  LI+G  +  + E A +L +EM  +G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+N+ YN+ +  L   G V  A      M  +   PD   Y+ L   L + G   +A KL
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
              V+ +  + D  +YN ++  L + +N+  A+++   M+  G  P+  TY  ++ G+C+
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
              ++ A +V E M K+   P++V YN +++GLCK   +D A  L       G   D ++
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y+ ++NG     K+ +A  +F  M    +  + V +NIL++ LCK G   +A++L+  M 
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421

Query: 596 LHGIIPDYVTYTTLVTRFSKN 616
             G  PDYV Y TL+    K 
Sbjct: 422 CSGCAPDYVAYNTLMNGLRKQ 442



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 193/364 (53%), Gaps = 2/364 (0%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN  T   ++  FCK G++    ++   M+  GI  +   Y  LIDGYA+ G  +EA RL
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EMV  GL P+   YNS ++    E  ++ A+ +   M +K   PD  TYS +  GLC+
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 407 NGCVKQAFK-LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
            G V +A + L ++++E     +  +YN LIN LCK  N+  A +LL  M  +G +PD I
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY T++ G C+ G +  A Q +++M      P++V YN +++ L K+   D A  L +  
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G + D +TYN+++ G      + EA  MF +M   G A N   Y+I+++  C+    
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             A ++++ M   G +PD VTY  L+    K    ++  EL   MV +G +PD  +Y+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 645 ISPL 648
           ++ L
Sbjct: 366 LNGL 369



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 163/306 (53%), Gaps = 2/306 (0%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           R   PN   +   +     +G +     +   M+D  I PD   Y+IL  G  + G V +
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L+ +++   +    Y+YN L+N  CK   +  A +L  +M  +G  PD++TY T+I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 473 GYCKGGNIEGAVQ-VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           G CK G +  A++ ++  M +     N V YN++INGLCKD +++ A  LL+     G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITYNT+++G    GK++EA   F  M + G + + V YN L++ L K G   +A +L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            K +I  G +PD VTY +++   ++  + +E  E+   MV SG +P+  TY+ ++S    
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 651 EKSAED 656
            K  +D
Sbjct: 302 AKKVDD 307



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 190/398 (47%), Gaps = 27/398 (6%)

Query: 54  MAPSLT--NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD 111
           + PS+   NSL+N    E +   K A+E +  + E   F   + +   I+  L    +  
Sbjct: 74  LEPSIYTYNSLLNAFCKETKM--KEAMELFKTMAEKG-FEPDVVTYSTIISGLCKTGKVT 130

Query: 112 DALLLMGNLM-----SANSVSPLEFLEGLLDSYEICKA------------TPA--VFDAL 152
           +AL ++ + M     SAN+V+    + GL     I +A             P    ++ +
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTI 190

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           +    ++G    A      +  +G+S  + A+N  L  L K  +     KL+K++++ GY
Sbjct: 191 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY 250

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           + +  T+N ++  L ++  ++EA  ++ +M+ SG  PN   ++++++  C+   ++ A K
Sbjct: 251 MPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHK 310

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +  +M   S    +P+ VT+N +++G CK   V+ A E+   M+  G   ++ +Y+ +++
Sbjct: 311 VLEEM---SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  +     +A  L D M++R L+P+ V +N  +  L   G ++ A  +L  M      P
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
           D+  Y+ L  GL + G   QA +L   + E+  + D +
Sbjct: 428 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 2/194 (1%)

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
           +R   P+  T+  ++  +CK G +    +++E M      P+ + YN +I+G  K   +D
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 517 AAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  L +    +GL  +I TYN+L+N +    K+ EA  +F  M   G   + V Y+ +I
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 576 NFLCKFGCYQQARELM-KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           + LCK G   +A E++   MI  G   + V Y  L+    K+ + E   +L ++M   G 
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 635 SPDNQTYNAIISPL 648
            PDN TYN I+S L
Sbjct: 181 VPDNITYNTILSGL 194


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 261/540 (48%), Gaps = 40/540 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  + A ++  +R   +      A ++   L  KG    +  +   +  L K+ E     
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++  EM+  G+V +    + ++  L K+  +  A  L  ++ K G+ P++  +N +IN  
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ A  LF  MG      + PN VT++ +I+ FCK G+++ A      M + GI 
Sbjct: 366 CKDGKLDEAESLFNNMG---HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIK 422

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             V  Y++LI G+ + G    A  L DEM+  GL PN V+Y S I     EG++  A  +
Sbjct: 423 ATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  K I P+ +T++ L  GLC    + +A KL  +++E +++ +  +YN+LI   CK
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCK 542

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             N   A +LL  M+ +GL+PD  TY  LI G C  G +  A +   +++  ++K N + 
Sbjct: 543 EGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC 602

Query: 502 YNSIINGLCK----DASLDAAKSLL--------------------QASQR--IGLL---- 531
           ++++++G CK    D +LDA + +L                    Q  +R  I LL    
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662

Query: 532 ------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
                 D + Y T+I+     G +  AF ++  M + G   N V Y  LIN LCK G   
Sbjct: 663 DQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMD 722

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L + M+    +P+  TY   +   +   + E+ I+LH D++L G   +  TYN +I
Sbjct: 723 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILI 781



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 280/629 (44%), Gaps = 41/629 (6%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDA 113
           ++ +L    V +V+ +     +LAL F+ ++G +  F HS  S C ++H LV    +  A
Sbjct: 53  ISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPA 112

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICK-ATPAVFDALVRACTQIGATEGAYDVIQKL 172
             L+   +    ++P    E  LDSY  C  +T   FD L++   Q         V++ +
Sbjct: 113 SSLL-QTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLM 171

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
              G    I   +  L+ L+++ +      L+ E+VS G   +V  +  V+ +LC+    
Sbjct: 172 MDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDF 231

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
             A  +  RM  SG   +V  +N+ I   C+   +  A+++     ++S   +  +  T+
Sbjct: 232 IRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEI---KNLLSYKGLRADVGTY 288

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             ++ G CK+   E  EE+   MI+ G   +    + L+DG  + G+   A  L +++ K
Sbjct: 289 CTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+  VYN+ I+ +  +G ++ A  + ++M  K + P+  TYSIL    C+ G +  
Sbjct: 349 FGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDV 408

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A     ++ E  +    Y Y+ LI+  CK   L AAK L   MI  GL P+++ Y +LI 
Sbjct: 409 ALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLIS 468

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GYCK G +  A ++Y  M      PN   + ++I+GLC    +  A  L        ++ 
Sbjct: 469 GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIP 528

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +TYN LI G+   G    AF +  EM   G+  +   Y  LI+ LC  G   +ARE M
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 592 -----------------------------------KVMILHGIIPDYVTYTTLVTRFSKN 616
                                              + M+  G+  D V Y+ L+    + 
Sbjct: 589 NDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                +I+L   M   G+ PDN  Y  +I
Sbjct: 649 QDRRSIIDLLKQMHDQGLRPDNVLYTTMI 677



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 238/498 (47%), Gaps = 3/498 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+ +  + G  + A   + K+   G   +++ +++ +S   KL ++     L+ EM
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           ++ G   NV  +  +I   CKE +L  A  LY+ M   GI PN   F  +I+  C    +
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KLF   G M   +V+PN VT+N +I G CK G    A E+   M++ G+  +  TY
Sbjct: 512 AEANKLF---GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G    G   EA    +++       N + +++ +H    EG ++ AL    +M+ 
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLG 628

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  D   YS+L  G+ R    +    L  Q+ ++ +  D   Y  +I+   K+ NL  
Sbjct: 629 RGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKM 688

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   M+  G +P+++TY  LI+G CK G ++ A  +   M      PN   Y   ++
Sbjct: 689 AFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLD 748

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            L  + +++ A  L        L + +TYN LI G+   G+I EA  +   M + GI+ +
Sbjct: 749 YLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 808

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ +I   C+ G  ++A +L + M+  G+ PD V Y  L+          +  EL D
Sbjct: 809 CISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRD 868

Query: 628 DMVLSGVSPDNQTYNAII 645
           DM+  GV P+  TYN++I
Sbjct: 869 DMMRRGVKPNRATYNSLI 886



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 221/473 (46%), Gaps = 40/473 (8%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KAT   + +L+    ++G    A  +  ++   G   ++  + + +S   K  E+   ++
Sbjct: 422 KATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFR 481

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LY EM   G   N  TF  +I  LC   ++ EA  L+  M++  + PN V +N++I   C
Sbjct: 482 LYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHC 541

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+   A +L  +M V  G  ++P++ T+  +I+G C  GRV  A E    +       
Sbjct: 542 KEGNTVRAFELLDEM-VEKG--LVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRG---------------------------- 354
           N   ++ L+ GY + G  ++AL  C EM+ RG                            
Sbjct: 599 NEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLL 658

Query: 355 -------LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
                  L P+NV+Y + I      G+++ A  +   M+ +   P+  TY+ L  GLC+ 
Sbjct: 659 KQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKI 718

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + +A  L  ++L  + + +  +Y   ++YL    N+  A QL   +++ G + + +TY
Sbjct: 719 GLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTY 777

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI G+CK G I+ A +V  NM      P+ + Y++II   C+   L  A  L ++   
Sbjct: 778 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLN 837

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            G+  D + YN LI G  + G++ +AF +  +M   G+  N+  YN LI+  C
Sbjct: 838 RGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 200/403 (49%), Gaps = 5/403 (1%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+  L  AN ++    L G +  + +       ++ L+    + G T  A++++ ++  K
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVI-PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK 559

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G     + +   +S L     +    +   ++       N   F+ +++  CKE +L++A
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDA 619

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L     ML  G+  ++VC++++I    +  D    + L ++M       + P++V +  +
Sbjct: 620 LDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQM---HDQGLRPDNVLYTTM 676

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+   K G ++ A  +   M+  G   NV TY  LI+G  + G  ++A  LC EM+    
Sbjct: 677 IDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 736

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +PN   Y   + +L +EG++E A+  L D++ +    +  TY+IL +G C+ G +++A +
Sbjct: 737 LPNQNTYACFLDYLTSEGNIEKAI-QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAE 795

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   +++  +  D  SY+ +I   C+  +L  A +L  SM+ RG+ PD + Y  LI G C
Sbjct: 796 VLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCC 855

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
             G +  A ++ ++M +   KPN   YNS+I+G C  +S+ + 
Sbjct: 856 VTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSST 898


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 257/481 (53%), Gaps = 5/481 (1%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           DV+ + ++K    ++  +   ++   K   +     LYK+M+  G + +V T + ++Y  
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C+  KL EA  L+  M + G+ PN V +  IIN   + G +  A  L  +M V+ G S  
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM-VVRGISF- 424

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            + VT   +++G  K+G+ + AEE+   ++K  +  N  TY+ L+DGY + G  E A  +
Sbjct: 425 -DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELV 483

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +M K  + PN + ++S I+    +G +  A+ VL +M+ +++ P+   Y+IL  G  +
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK 543

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G    A     ++    +      ++IL+N L +   +  A+ L+  M  +G+ PDI+ 
Sbjct: 544 AGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVN 603

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y +LIDGY K GN   A+ + + MK+   + ++V YN++I GL +    D  + +     
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP-RYVCSRMI 662

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            +GL  D ITYNT+IN Y I GK  +A  + +EM++ GI  N V YNILI  LCK G  +
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A   +  M++   +P  +T+  LV  +S++   ++++++H+ +V SG+      YN +I
Sbjct: 723 KAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLI 782

Query: 646 S 646
           +
Sbjct: 783 T 783



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 265/557 (47%), Gaps = 50/557 (8%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E  E  LD   +  AT  + ++L ++    G    A+++  ++ V+G S  I      + 
Sbjct: 381 EMYEMGLDPNHVSYAT--IINSLFKS----GRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+ +     ++++ ++      N  T++ ++   CK  K+E A  +  +M K  + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING----------- 298
           NV+ F+ IIN   + G L  A+ + R+M      +V+PN++ +  +I+G           
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREM---VQRNVMPNTIVYAILIDGYFKAGEQDVAD 551

Query: 299 -FCK-----------------------LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            FCK                       +GR++ A  +   M   GID ++  YA+LIDGY
Sbjct: 552 DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G+   AL +  EM ++ +  + V YN+ I  L   G  +   +V S MI+  + PD 
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDC 670

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ +    C  G  + A  + N++    ++ +A +YNILI  LCK+  +  A+  L  
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDE 730

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+V   +P  IT+  L+  Y +    +  +Q++E +     + +L +YN++I   C+   
Sbjct: 731 MLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGM 790

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
              AK +L    + G+  D +TYN LI GY     + +A   +S+M   GIA N   YN 
Sbjct: 791 TRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNT 850

Query: 574 LINFLCKFGCYQQAR----ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           L+  L   G  ++      +L+  M   G++P+  TY  LV+ + +  + ++ I LH +M
Sbjct: 851 LLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEM 910

Query: 630 VLSGVSPDNQTYNAIIS 646
           +  G  P  +TYN +IS
Sbjct: 911 ITKGFVPTLKTYNVLIS 927



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 232/463 (50%), Gaps = 28/463 (6%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW---------------------PNVVC 253
           ++ T+N ++ A CK   L  A SL+  +L  G W                     P +V 
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEIL--GFWKDEDRLKNNDVVTQNEIKNLQPTLVT 323

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +I   C+   +E +  L++KM +M+G  ++P+ VT + I+ GFC+ G++  A  +  
Sbjct: 324 YTTLIAAYCKFVGVEESHSLYKKM-IMNG--IMPDVVTCSSILYGFCRHGKLTEAAVLFR 380

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M + G+D N  +YAT+I+   + G   EA  L  +MV RG+  + V   + +  LF  G
Sbjct: 381 EMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVG 440

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             + A  V   ++  ++ P+  TYS L  G C+ G ++ A  +  ++ +EH+  +  +++
Sbjct: 441 KTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFS 500

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +IN   K   L+ A  +L  M+ R ++P+ I Y  LIDGY K G  + A    + MK  
Sbjct: 501 SIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSR 560

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
             + + VI++ ++N L +   +D A+SL+      G+  D + Y +LI+GYF  G    A
Sbjct: 561 RLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAA 620

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            ++  EM+   I  + V YN LI  L + G Y   R +   MI  G+ PD +TY T++  
Sbjct: 621 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINT 679

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +      E+ +++ ++M   G+ P+  TYN +I  L    + E
Sbjct: 680 YCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVE 722



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 146/590 (24%), Positives = 265/590 (44%), Gaps = 43/590 (7%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYE----------------I 141
           C ++ L +   RF  A     ++ +   V  L F   LL  +                  
Sbjct: 63  CTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLF 122

Query: 142 CKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C   P VF  + LV +  ++G  + A   ++   V    +    +N  +    +   + +
Sbjct: 123 CGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTYNTVIWGFCQKGLVDQ 180

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + L  EMV  G   +  T N+++   C+   ++ A  + Y ++  G+  +V+  N +I+
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLID 240

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK-- 317
             C+ G +  A +L           V  + VT+N ++  FCK G +  AE +   ++   
Sbjct: 241 GYCEAGLMSQATELIENSW---RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297

Query: 318 -----------------AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
                              +   + TY TLI  Y +    EE+  L  +M+  G+MP+ V
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVV 357

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
             +S ++     G +  A  +  +M +  + P+H +Y+ +   L ++G V +AF L +Q+
Sbjct: 358 TCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           +   +  D  +   +++ L K      A+++  +++   L P+ +TY  L+DGYCK G +
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTL 539
           E A  V + M+K    PN++ ++SIING  K   L  A  +L +  QR  + + I Y  L
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GYF  G+   A     EM++  +  + V ++IL+N L + G   +AR L+  M   GI
Sbjct: 538 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 597

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            PD V Y +L+  + K  +    + +  +M    +  D   YNA+I  LL
Sbjct: 598 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL 647



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 247/517 (47%), Gaps = 24/517 (4%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK----------LNEIG 198
            + L+    + G    A ++I+        + I  +N  L    K           NEI 
Sbjct: 235 LNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEIL 294

Query: 199 RFWK-----LYKEMVSCGYVENVN----TFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            FWK        ++V+   ++N+     T+  +I A CK   +EE+ SLY +M+ +GI P
Sbjct: 295 GFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMP 354

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +VV  + I+   C+ G L  A  LFR+M  M  D   PN V++  IIN   K GRV  A 
Sbjct: 355 DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLD---PNHVSYATIINSLFKSGRVMEAF 411

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            ++  M+  GI  ++ T  T++DG  + G ++EA  + + ++K  L PN V Y++ +   
Sbjct: 412 NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 471

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G +E A  VL  M  +H+ P+  T+S +  G  + G + +A  +  ++++ +++ + 
Sbjct: 472 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 531

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             Y ILI+   K+     A      M  R L    + +  L++   + G ++ A  +  +
Sbjct: 532 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIID 591

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M      P++V Y S+I+G  K+ +  AA S++Q  +   +  D + YN LI G    GK
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
               +   S M  +G+A + + YN +IN  C  G  + A +++  M  +GI+P+ VTY  
Sbjct: 652 YDPRYVC-SRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNI 710

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           L+    K  + E+     D+M++    P   T+  ++
Sbjct: 711 LIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLV 747



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 233/492 (47%), Gaps = 19/492 (3%)

Query: 129 LEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +E  E +L   E     P V  F +++    + G    A DV++++  +    +   +  
Sbjct: 477 MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAI 536

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K  E        KEM S    E+   F++++  L +  +++EA SL   M   G
Sbjct: 537 LIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG 596

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I P++V +  +I+   + G+   AL + ++M      ++  + V +N +I G  +LG+ +
Sbjct: 597 IDPDIVNYASLIDGYFKEGNQLAALSIVQEM---KEKNIRFDVVAYNALIKGLLRLGKYD 653

Query: 307 FAEEIRYA---MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
                RY    MI+ G+  +  TY T+I+ Y   G +E+AL + +EM   G+MPN V YN
Sbjct: 654 ----PRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             I  L   G VE A   L +M+     P   T+  L K   R+    +  ++H +++  
Sbjct: 710 ILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVAS 769

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +      YN LI   C+      AK +L  M+ RG+  D++TY  LI GYC G ++E A
Sbjct: 770 GLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 829

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASL------DAAKSLLQASQRIGLLDAITYN 537
           ++ Y  M      PN+  YN+++ GL  +A L      +  K + + ++R  + +A TY+
Sbjct: 830 LKTYSQMFVDGIAPNITTYNTLLGGL-SNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 888

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            L++GY   G   +   +  EM   G       YN+LI+   K G   +AREL+  ++  
Sbjct: 889 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 948

Query: 598 GIIPDYVTYTTL 609
           G IP+  TY  L
Sbjct: 949 GRIPNSFTYDIL 960



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 12/366 (3%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY--KE 206
           + +L+    + G    A  ++Q++K K     + A+N  +  L++L   G++   Y    
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL---GKYDPRYVCSR 660

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   +  T+N +I   C + K E+AL +   M   GI PN V +N++I   C+ G 
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 720

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A     +M VM     +P  +TH  ++  + +  + +   +I   ++ +G++ ++  
Sbjct: 721 VEKAESALDEMLVME---FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV 777

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TLI  + R G + +A  + DEMVKRG+  + V YN+ I        VE AL   S M 
Sbjct: 778 YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMF 837

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAF----KLHNQVLEEHMVGDAYSYNILINYLCKS 442
              I P+  TY+ L  GL   G +++      KL +++ E  +V +A +Y+IL++   + 
Sbjct: 838 VDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 897

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N      L   MI +G +P + TY  LI  Y K G +  A ++  ++    + PN   Y
Sbjct: 898 GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTY 957

Query: 503 NSIING 508
           + +  G
Sbjct: 958 DILTCG 963



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 188/385 (48%), Gaps = 46/385 (11%)

Query: 283 DSV-LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA--------GIDCNVRTYATLIDG 333
           DS+ +P + TH   ++ FC L R+    + R++   A        G+   +  + TL+  
Sbjct: 46  DSIFIPPTKTH-LYVSFFCTLIRLYLTHD-RFSTASATFSHMRALGLVPTLPFWNTLLYQ 103

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL--SDMIDKHIC 391
           +   G   +   +  +M+  G++P+    N  +H L   GD++ AL  L  +D++D    
Sbjct: 104 FNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVD---- 159

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
            D+ TY+ +  G C+ G V Q F L +++++  +  D+ + NIL+   C+   +  A+ +
Sbjct: 160 IDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWV 219

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           + +++  G+  D+I   TLIDGYC+ G +  A ++ EN  + + K ++V YN+++   CK
Sbjct: 220 MYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCK 279

Query: 512 DASLDAAKSLL-------QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
              L  A+SL        +   R+   D +T N                    E++N+  
Sbjct: 280 TGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN--------------------EIKNLQP 319

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            +  V Y  LI   CKF   +++  L K MI++GI+PD VT ++++  F ++    E   
Sbjct: 320 TL--VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLL 649
           L  +M   G+ P++ +Y  II+ L 
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLF 402


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/594 (27%), Positives = 286/594 (48%), Gaps = 30/594 (5%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           ++E ++W G    + HS +    ++  L +   F     L+  +     V        ++
Sbjct: 88  SMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIM 147

Query: 137 DSYEICKATPAVFDALV---RACTQIGATEGAYDVIQKLKVKG--HSVSIHAWNNFLSH- 190
             Y+     P     L+   R       T  +Y+V+ ++ V G  H V+ + + + LS  
Sbjct: 148 RDYDKA-GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK 206

Query: 191 --------------LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
                         L  +NE+     + ++M   G V N   +  +I++L K  ++ EAL
Sbjct: 207 IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 266

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            L   M   G  P+   FN +I   C+   +  A K+  +M +       P+ +T+  ++
Sbjct: 267 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG---FTPDDITYGYLM 323

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GL 355
           NG CK+GRV+ A+++ Y + K         + TLI G+   G  ++A  +  +MV   G+
Sbjct: 324 NGLCKIGRVDAAKDLFYRIPKP----TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 379

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+   YNS I+  + +G V  AL VL DM +K   P+ ++Y+IL  G C+ G + +A+ 
Sbjct: 380 VPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 439

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L N++  + +  +   +N LI+  CK + +  A ++   M  +G  PD+ T+ +LI G C
Sbjct: 440 LLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 499

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAI 534
           +   I+ A+ +  +M       N V YN++IN   +   +  A+ L+      G LLD I
Sbjct: 500 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEI 559

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN+LI G    G++ +A ++F +M   G+  + +  NILIN LC+ G  ++A E  K M
Sbjct: 560 TYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEM 619

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L G  PD VT+ +L+    +    E+ + +   +   G+ PD  TYN ++S L
Sbjct: 620 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWL 673



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 256/513 (49%), Gaps = 9/513 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  +++A   +   + A  V++ +   G   +   +   +  L K N +    +L +EM
Sbjct: 213 TFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 272

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G V +  TFN VI  LCK  ++ EA  +  RML  G  P+ + +  ++N  C++G +
Sbjct: 273 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRV 332

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRT 326
           + A  LF ++         P SV  N +I+GF   GR++ A+ +   M+ + GI  +V T
Sbjct: 333 DAAKDLFYRIPK-------PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 385

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LI GY + G    AL +  +M  +G  PN   Y   +      G ++ A  +L++M 
Sbjct: 386 YNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS 445

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + P+   ++ L    C+   + +A ++  ++  +    D Y++N LI+ LC+ + + 
Sbjct: 446 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 505

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL  MI  G++ + +TY TLI+ + + G I+ A ++   M       + + YNS+I
Sbjct: 506 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLC+   +D A+SL +   R GL+  +I+ N LING   +G + EA     EM   G  
Sbjct: 566 KGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGST 625

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + V +N LIN LC+ G  +    + + +   GI PD VTY TL++   K     +   L
Sbjct: 626 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLL 685

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            D+ +  G  P+++T++ ++  L+ +++ + + 
Sbjct: 686 LDEGIEDGFVPNDRTWSILLQSLVPQETLDRRT 718



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 215/432 (49%), Gaps = 26/432 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE----GLLDSYEICKATPAVFDALVR 154
            ++H L    R ++AL L+  +     V   E       GL     I +A   V   L+R
Sbjct: 251 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 310

Query: 155 ACT--------------QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
             T              +IG  + A D+  ++  K  SV    +N  +   V    +   
Sbjct: 311 GFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP-KPTSV---IFNTLIHGFVTHGRLDDA 366

Query: 201 WKLYKEMV-SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             +  +MV S G V +V T+N +IY   K+  +  AL +   M   G  PNV  + ++++
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C++G ++ A  L  +M   S D + PN+V  NC+I+ FCK  R+  A EI   M + G
Sbjct: 427 GFCKLGKIDEAYNLLNEM---SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              +V T+ +LI G       + AL L  +M+  G++ N V YN+ I+     G+++ A 
Sbjct: 484 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 543

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            ++++M+ +    D  TY+ L KGLCR G V +A  L  ++L + +V  + S NILIN L
Sbjct: 544 KLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGL 603

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C+S  +  A +    M++RG  PDI+T+ +LI+G C+ G IE  + ++  ++     P+ 
Sbjct: 604 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 663

Query: 500 VIYNSIINGLCK 511
           V YN++++ LCK
Sbjct: 664 VTYNTLMSWLCK 675



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 179/384 (46%), Gaps = 58/384 (15%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
            ++H  V   R DDA  ++ +++++  + P           ++C      +++L+    +
Sbjct: 352 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVP-----------DVC-----TYNSLIYGYWK 395

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G    A +V++ ++ KG   +++++   +    KL +I   + L  EM + G   N   
Sbjct: 396 KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG 455

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM- 277
           FN +I A CKE ++ EA+ ++  M + G  P+V  FN +I+  C+V +++ AL L R M 
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515

Query: 278 --GVMSG-----------------------------DSVLPNSVTHNCIINGFCKLGRVE 306
             GV++                                 L + +T+N +I G C+ G V+
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVD 575

Query: 307 -----FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
                F + +R  ++ + I CN+     LI+G  R G  EEA+    EMV RG  P+ V 
Sbjct: 576 KARSLFEKMLRDGLVPSSISCNI-----LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 630

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +NS I+ L   G +E  L +   +  + I PD  TY+ L   LC+ G V  A  L ++ +
Sbjct: 631 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGI 690

Query: 422 EEHMVGDAYSYNILINYLCKSNNL 445
           E+  V +  +++IL+  L     L
Sbjct: 691 EDGFVPNDRTWSILLQSLVPQETL 714



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 127/239 (53%), Gaps = 3/239 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     F++L+    ++   + A  +++ +  +G   +   +N  ++  ++  EI    
Sbjct: 484 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 543

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL  EMV  G + +  T+N +I  LC+  ++++A SL+ +ML+ G+ P+ +  N++IN  
Sbjct: 544 KLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGL 603

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A++ F+K  V+ G +  P+ VT N +ING C+ GR+E    +   +   GI 
Sbjct: 604 CRSGMVEEAVE-FQKEMVLRGST--PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 660

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
            +  TY TL+    +GG   +A  L DE ++ G +PN+  ++  +  L  +  ++   F
Sbjct: 661 PDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTF 719


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 248/481 (51%), Gaps = 9/481 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     V+  L+ A +++G       +++++ + G    ++ +N+ +  L K+  I    
Sbjct: 266 CVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAA 325

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINE 260
           KL   M+  G+  N  T+ ++++ LC+  K++EA     RML + +  PNVV FN +IN 
Sbjct: 326 KLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA-----RMLLNKVPNPNVVLFNTLING 380

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
               G L+ A  +  +  +  G    P+  T+N +I G CK G +  A E+   M   G 
Sbjct: 381 YVSRGRLDEAKAVMHESMLSVGCG--PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC 438

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + NV TY  LID + + G  EEA  + DEM  +GL  N V YN  I  L  +  V+ AL 
Sbjct: 439 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 498

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +  DM  K   PD FT++ L  GLC+    ++A  L+  +L E ++ +  +YN LI+   
Sbjct: 499 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 558

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +   +  A +L++ M+ RG   D ITY  LI   C+ GNIE  + ++E+M      PN +
Sbjct: 559 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 618

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
             N +INGLC+  ++  A   L+     GL  D +TYN+LING    G+  EA  +F ++
Sbjct: 619 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 678

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           +  GI  + + YN LI++ CK G +  A  L+   +  G IP+ VT+  LV+ F K    
Sbjct: 679 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 738

Query: 620 E 620
           E
Sbjct: 739 E 739



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 250/482 (51%), Gaps = 9/482 (1%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           +V  ++  KG S +++ +   +  L  +NE+     L K+M   G V N   +  +I+AL
Sbjct: 221 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 280

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
            K  ++ E L L   ML  G  P+V  FN  I+  C++  +  A KL  +M ++ G +  
Sbjct: 281 SKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRM-LLRGFT-- 337

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PNS T+  +++G C++G+V+   E R  + K   + NV  + TLI+GY   G  +EA  +
Sbjct: 338 PNSFTYGVLMHGLCRMGKVD---EARMLLNKVP-NPNVVLFNTLINGYVSRGRLDEAKAV 393

Query: 347 CDE-MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
             E M+  G  P+   YN+ I  L  +G +  A  ++++M  K   P+  TY+IL    C
Sbjct: 394 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 453

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G +++A  + +++  + +  +A  YN LI+ LCK   +  A  +   M  +G  PDI 
Sbjct: 454 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 513

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           T+ +LI G CK    E A+ +Y++M       N + YN++I+   +  ++  A  L+   
Sbjct: 514 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 573

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G  LD ITYN LI      G I +  A+F +M + G+  N +  NILIN LC+ G  
Sbjct: 574 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 633

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           Q A E ++ MI  G+ PD VTY +L+    K    +E + L D + + G+ PD  TYN +
Sbjct: 634 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 693

Query: 645 IS 646
           IS
Sbjct: 694 IS 695



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 201/414 (48%), Gaps = 44/414 (10%)

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           +++Y ML  GI P V  F +++   C V +++ A  L + M              H C+ 
Sbjct: 221 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM------------TRHGCVP 268

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           N                             Y TLI   ++ G   E L+L +EM+  G +
Sbjct: 269 NAI--------------------------VYQTLIHALSKVGRVNEVLKLLEEMLLMGCI 302

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+   +N  IH L     +  A  ++  M+ +   P+ FTY +L  GLCR G V +A  L
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL-SSMIVRGLIPDIITYGTLIDGYC 475
            N+V   ++V     +N LIN       L  AK ++  SM+  G  PDI TY TLI G C
Sbjct: 363 LNKVPNPNVV----LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 418

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K G +  A ++   M+    +PN++ Y  +I+  CK+  L+ A+++L      GL L+A+
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 478

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN LI+    + K+ +A  MF +M + G   +   +N LI  LCK   +++A  L + M
Sbjct: 479 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 538

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L G+I + +TY TL+  F +  + +E ++L +DM+  G   D+ TYN +I  L
Sbjct: 539 LLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 219/451 (48%), Gaps = 10/451 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY    + + ++I  L    + +   +L  +M + GI      F +I+    + G    A
Sbjct: 124 GYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQA 183

Query: 271 LKLFRKM-GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
            +L   M GV S +   P   ++N +++        +    + Y M+  GI   V T+  
Sbjct: 184 TRLLLDMRGVYSCE---PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 240

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           ++         + A  L  +M + G +PN +VY + IH L   G V   L +L +M+   
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG 300

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             PD  T++    GLC+   + +A KL +++L      ++++Y +L++ LC+   +  A+
Sbjct: 301 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR 360

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV-YENMKKVEKKPNLVIYNSIING 508
            LL+ +      P+++ + TLI+GY   G ++ A  V +E+M  V   P++  YN++I G
Sbjct: 361 MLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK   L +A+ L+   Q  G   + ITY  LI+ +   G++ EA  +  EM   G+A+N
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            VGYN LI+ LCK    Q A  +   M   G  PD  T+ +L+    K    EE + L+ 
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           DM+L GV  +  TYN +I   L   + ++ +
Sbjct: 537 DMLLEGVIANTITYNTLIHAFLRRGAMQEAL 567



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 56/118 (47%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+    + G  + A + ++ +  +G +  I  +N+ ++ L K         L+ ++   G
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
              +  T+N +I   CKE   ++A  L  R + SG  PN V + ++++   + GD EF
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 740


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 267/540 (49%), Gaps = 20/540 (3%)

Query: 31  TEDIVFRAICVNLRQRKWKIL--EQMAPSLTNSLVNRVVSEFR---KSPKLALEFYTWVG 85
           +E  + + IC  + +  W  L   ++   LT S +++V+ +     + P L+   + W+ 
Sbjct: 9   SETQLVQNICATVIKGGWNNLLRPKICSILTASTLHQVLYQLSLHSQGPCLSWALFKWIE 68

Query: 86  EN-NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA 144
            +   + HSL+SS  ++H+L  ++    A  L+  +   + +S    L  L+  ++    
Sbjct: 69  SSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDI 128

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
              VF  LV         + A  V + + V G    +HA    L+ L K       WK+Y
Sbjct: 129 NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVY 188

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           K+M   G   N++ +N++I+A CK   +E+A +L   M    ++P++  +N +I+  C+ 
Sbjct: 189 KKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKK 248

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA----EEIRYAMIKAGI 320
           G    AL +  +M     + + P+ VT+N +I+GFCK GR+  A    +EIR A      
Sbjct: 249 GMHYEALSVQDRM---EREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATP---- 301

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY TLIDGY R    ++ALRL +EM  +GL P  V YNS +  L   G +  A  
Sbjct: 302 --NHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANK 359

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L++M +K I PD+ T + L    C+ G +K A K+ N+++E  +  D ++Y  LI+  C
Sbjct: 360 LLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFC 419

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  AK+LL SM+  G  P   TY  L+DGYC   N E  +++ +   +     +  
Sbjct: 420 KIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKS 479

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
           +Y ++I   CK   +D AK +    Q  G L D++ Y +L   Y+  GK   A  +  EM
Sbjct: 480 LYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEM 539



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 171/332 (51%), Gaps = 3/332 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G   ++     L++  A+   ++   ++  +M + G+  N  VYN  IH     GD
Sbjct: 156 MMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGD 215

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           VE A  +LS+M  K + PD FTY+ L    C+ G   +A  + +++  E +  D  +YN 
Sbjct: 216 VEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNS 275

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK   +  A +L     +R   P+ +TY TLIDGYC+  +++ A+++ E M+   
Sbjct: 276 LIHGFCKEGRMREAMRLFKE--IRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQG 333

Query: 495 KKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             P +V YNSI+  LC+   + DA K L + S++    D +T NTLIN Y   G +  A 
Sbjct: 334 LYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSAL 393

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            + + M   G+ +++  Y  LI+  CK      A+EL+  M+  G  P Y TY+ LV  +
Sbjct: 394 KVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGY 453

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
               + E V++L D+ V  G+  D   Y A+I
Sbjct: 454 CNQQNEEAVLKLPDEFVRKGLCVDKSLYRALI 485



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 164/336 (48%), Gaps = 3/336 (0%)

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           D N   ++ L+  YA     +EA+++ + M+  G  P+       ++ L  +   +    
Sbjct: 127 DINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWK 186

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V   M    +  +   Y++L    C++G V++A  L +++  + +  D ++YN LI+  C
Sbjct: 187 VYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYC 246

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K      A  +   M   G+ PDI+TY +LI G+CK G +  A+++++ ++  +  PN V
Sbjct: 247 KKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIR--DATPNHV 304

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEM 559
            Y ++I+G C+   LD A  L +  +  GL   + TYN+++      G+I +A  + +EM
Sbjct: 305 TYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEM 364

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               I  + V  N LIN  CK G  + A ++   M+  G+  D  TY  L+  F K    
Sbjct: 365 SEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREM 424

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +   EL   M+ +G SP   TY+ ++     +++ E
Sbjct: 425 DGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEE 460


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 262/540 (48%), Gaps = 61/540 (11%)

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL 135
           +A +F+ WV        S+ +   +V +L   RRF++A  ++  +  +  +         
Sbjct: 1   MAYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYI--------- 51

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
                     P +F  L R     G  E + + +++++  GH  ++ A            
Sbjct: 52  --------LQPRIFIELARGYASAGLLEKSVEALKRME--GHRCALTA------------ 89

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
                                + +N +I A  K    ++AL++Y  M +SG+ P+   FN
Sbjct: 90  ---------------------SAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFN 128

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           +++N   +   ++   KLF +M      +  PN +T++ +I+  CK G VE A ++   M
Sbjct: 129 VLMNAFKKAKRVDSVWKLFEEM---QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDM 185

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
              G   N+ TY ++IDG  + G  ++A  L +EM   GL+   VVYNS IH L   G  
Sbjct: 186 KSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRA 245

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           + A  +  +M+ K + PDH T++ L  GL   G   +A ++  +  +     D   YN+L
Sbjct: 246 DAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ LCKS  L  A ++   +   GL+PD+ T+  L+DG CK G I  A  +  +MK+   
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            P++ +YN++I+GL K   ++ A  LL   Q +G   D +TYNTLI+     G+I +A  
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALR 425

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL---MKVMILHGII-PDYVTYTTLV 610
           +F E+   G A N V YN ++N LC  G   +A +L   MK   + G+I PD+VTYTTL+
Sbjct: 426 LFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLL 484



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 188/370 (50%), Gaps = 2/370 (0%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M G      +  +N +I+ F K G  + A  +   M ++G+  +  T+  L++ + +   
Sbjct: 80  MEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKR 139

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +   +L +EM  +   PN + Y+  I  +   G VE AL V  DM  +   P+ FTY+ 
Sbjct: 140 VDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTS 199

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +  GL ++G V +AF L  ++  E +V     YN LI+ L +S    AA +L   M+ +G
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L PD +T+ +L+ G    G    A ++++  + V    ++ +YN +I+ LCK   LD A 
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +    +  GL+ D  T+N L++G   +G+I +AF +  +M+  G   +   YN LI+ L
Sbjct: 320 EIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGL 379

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G  ++A +L+  M   G  PD VTY TL+    K    E+ + L +++   G + + 
Sbjct: 380 RKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NT 438

Query: 639 QTYNAIISPL 648
            TYN I++ L
Sbjct: 439 VTYNTILNGL 448



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 161/333 (48%), Gaps = 1/333 (0%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R +  L  GYA  G  E+++     M           YNS I      G  + AL V   
Sbjct: 55  RIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRV 114

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M    + PD +T+++L     +   V   +KL  ++  ++   +  +Y+ILI+ +CK   
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A ++   M  RG  P+I TY ++IDG  K G+++ A  ++E M         V+YNS
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+GL +    DAA  L +     GL  D +T+ +L+ G  + G+ +EA  +F E R+VG
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
            A++   YN+LI+ LCK     +A E+   +   G++PD  T+  L+    K+    +  
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            L  DM  +G +PD   YN +I  L      E+
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEE 387



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 8/341 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+ A  + G  E A  V   +K +G   +I  + + +  L K   + + +
Sbjct: 155 CSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAF 214

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L++EM S G V     +N +I+ L +  + + A  L+  ML  G+ P+ V F  ++   
Sbjct: 215 FLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGL 274

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G    A ++F++   + G ++  N   +N +I+  CK  R++ A EI   + + G+ 
Sbjct: 275 GVAGRASEARRIFQEARDV-GCALDVN--LYNVLIDTLCKSKRLDEAWEIFGELEEDGLV 331

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+  L+DG  + G   +A  L  +M + G  P+  VYN+ I  L   G VE A  +
Sbjct: 332 PDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQL 391

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M      PD  TY+ L    C+ G ++ A +L  ++  +    +  +YN ++N LC 
Sbjct: 392 LLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCM 450

Query: 442 SNNLAAAKQLLSSM---IVRGLI-PDIITYGTLIDGYCKGG 478
           +  +  A +L + M    V G+I PD +TY TL++G  + G
Sbjct: 451 AGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 8/183 (4%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+++  +L+  G    ++ +N  +  L K   I   + L  +M   G   +V  +N +I 
Sbjct: 318 AWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLID 377

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            L K  ++EEA  L   M   G  P+VV +N +I+E+C+ G +E AL+LF ++       
Sbjct: 378 GLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG--- 434

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAM----IKAGIDCNVRTYATLIDGYARGGSS 340
              N+VT+N I+NG C  GRV+ A ++   M    +   ID +  TY TL++G  + G S
Sbjct: 435 -FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLS 493

Query: 341 EEA 343
           E A
Sbjct: 494 ELA 496


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 260/558 (46%), Gaps = 51/558 (9%)

Query: 149 FDALVR---ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           F+ L++   +C+++      +  I KL   G    +  +   L  L   + +      + 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKL---GLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +M       NV TF  ++  LC+E ++ EA++L  RM++ G+ P  + +  I++  C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 266 DLEFALKLFRKM---------------------------------GVMSGDSVLPNSVTH 292
           D   AL L RKM                                   M    + P+  T+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I GFC  GR   AE++   M++  I  +V TY  LI+ + + G   EA  L DEM+ 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG++PN + YNS I     +  ++ A  +   M  K   PD FT++ L  G C    +  
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
             +L +++    +V +  +YN LI+  C   +L AA  L   MI  G+ PDI+T  TL+D
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 473 GYCKGGNIEGAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSL 521
           G C  G ++ A+++++ M+K +            +P+++ YN +I GL  +     A+ L
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +     G++ D ITY+++I+G     ++ EA  MF  M +   + N V +N LIN  CK
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 593

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G      EL   M   GI+ D + Y TL+  F K  +    +++  +M+ SGV PD  T
Sbjct: 594 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 653

Query: 641 YNAIISPLLGEKSAEDQV 658
              +++    ++  E  V
Sbjct: 654 IRNMLTGFWSKEELERAV 671



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 266/536 (49%), Gaps = 24/536 (4%)

Query: 132 LEGLLDSYEI------CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           ++GL D+ ++       +  P+V D   L+    ++   +    + QK++ K     I++
Sbjct: 57  IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +      +++      + ++   G   +V TF  +++ LC E ++ EAL  +++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++   PNVV F  ++N  C+ G +  A+ L  +   M  D + P  +T+  I++G CK G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR---MMEDGLQPTQITYGTIVDGMCKKG 233

Query: 304 RVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
               A  +   M +   I  NV  Y+ +ID   + G   +A  L  EM ++G+ P+   Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS I    + G    A  +L +M+++ I PD  TY+ L     + G   +A +L++++L 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +  +YN +I+  CK + L AA+ +   M  +G  PD+ T+ TLIDGYC    I+ 
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
            +++   M +     N V YN++I+G C    L+AA  L Q     G+  D +T NTL++
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 542 GYFINGKIAEAFAMFSEMRNV-----------GIAVNKVGYNILINFLCKFGCYQQAREL 590
           G   NGK+ +A  MF  M+             G+  + + YNILI  L   G + +A EL
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + M   GI+PD +TY++++    K    +E  ++   M     SP+  T+N +I+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLIN 589



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 238/492 (48%), Gaps = 29/492 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV-SIHAWNNFLSHLVKLNEIGRFW 201
           + T   +  +V    + G T  A ++++K++   H + ++  ++  +  L K        
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM   G   ++ T+N +I   C   +  +A  L   ML+  I P+VV +N +IN  
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G    A +L+ +M       ++PN++T+N +I+GFCK  R++ AE++ Y M   G  
Sbjct: 336 VKEGKFFEAAELYDEM---LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 392

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+ TLIDGY      ++ + L  EM +RGL+ N V YN+ IH     GD+  AL +
Sbjct: 393 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 452

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI   +CPD  T + L  GLC NG +K A ++   + +  M  DA            
Sbjct: 453 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA------------ 500

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                       S    G+ PD++TY  LI G    G    A ++YE M      P+ + 
Sbjct: 501 ------------SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 548

Query: 502 YNSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+S+I+GLCK + LD A  + +    +    + +T+NTLINGY   G++ +   +F EM 
Sbjct: 549 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 608

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  + + Y  LI    K G    A ++ + MI  G+ PD +T   ++T F      E
Sbjct: 609 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 668

Query: 621 EVIELHDDMVLS 632
             + + +D+ +S
Sbjct: 669 RAVAMLEDLQMS 680



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 183/385 (47%), Gaps = 5/385 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  LE A+ LF  M        LP+ V    ++    ++ R +    +   M +  I C
Sbjct: 56  EIKGLEDAIDLFSDM---LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ ++  LI  +        AL    ++ K GL P+ V + + +H L  E  V  AL   
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +    P+  T++ L  GLCR G + +A  L ++++E+ +     +Y  +++ +CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 443 NNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +A  LL  M  V  +IP+++ Y  +ID  CK G    A  ++  M++    P+L  
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS+I G C       A+ LLQ   +R    D +TYN LIN +   GK  EA  ++ EM 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N + YN +I+  CK      A ++  +M   G  PD  T+TTL+  +      +
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + +EL  +M   G+  +  TYN +I
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLI 437



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 179/362 (49%), Gaps = 2/362 (0%)

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +GF ++  +E A ++   M+++    +V  +  L+    R    +  + L  +M ++ + 
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            +   +N  I    +   +  AL     +    + PD  T++ L  GLC    V +A   
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +Q+ E     +  ++  L+N LC+   +  A  LL  M+  GL P  ITYGT++DG CK
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 477 GGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
            G+   A+ +   M++V    PN+VIY++II+ LCKD     A++L    Q  G+  D  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN++I G+  +G+ ++A  +  EM    I+ + V YN LIN   K G + +A EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  GIIP+ +TY +++  F K    +   ++   M   G SPD  T+  +I    G K  
Sbjct: 352 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411

Query: 655 ED 656
           +D
Sbjct: 412 DD 413


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 167/620 (26%), Positives = 303/620 (48%), Gaps = 35/620 (5%)

Query: 49  KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           ++L ++ P+L +S +    S FR  P   L   + +       H+L  + +++      +
Sbjct: 52  RLLRRLIPALASSGLVAAASRFRPVPGDPLTLNSIILSYCSL-HALRPALSLLRSSSGPQ 110

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDS----------YEICK-ATPAVFDALVRACT 157
                       ++A++VS   FL GL +            E+CK   P  +D +  +  
Sbjct: 111 ----------PQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVP--WDGVTMSTA 158

Query: 158 QIGATE----GAYDVIQKLKVKGHSV---SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
            +G +     G    + ++ V+G  +    +  WN  +    K+ ++     + + M + 
Sbjct: 159 LVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQ 218

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   +V  +N ++         + A  +  RM   G+ P+VV    +I E C++  +E A
Sbjct: 219 GLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEA 278

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             L+  M V SG  VLP+ VT + +++G C+ GR   A  +   M K G+  N  TY T 
Sbjct: 279 FTLYEGM-VRSG--VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTF 335

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           ID  A+     E+L L  EMV RG+  + V+Y + +  L  EG +E A  VL   +  +I
Sbjct: 336 IDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNI 395

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  TY++L    CR G +  A ++  Q+ E+ +  +  +++ ++N L K   +A A  
Sbjct: 396 TPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAG 455

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
            +  M   G+ P+++TYGTLIDG+ K    E A+ VY +M     + N  I +S++NGL 
Sbjct: 456 YMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLR 515

Query: 511 KDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K+ +++ A++L +   +R  LLD + Y TL++G F  G +  A  +  E+    ++ + V
Sbjct: 516 KNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAV 575

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YN+ IN LC+ G + +A+  +K M   G+ PD  TY T+++   +  +  + ++L ++M
Sbjct: 576 VYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635

Query: 630 VLSGVSPDNQTYNAIISPLL 649
             S + P+  TY  ++  LL
Sbjct: 636 KWSSIKPNLITYTTLVVGLL 655



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 244/502 (48%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              ALV    + G    AY + +++   G + +   +  F+  L K+  +     L  EM
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEM 355

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G   ++  +  V+  L KE K+EEA  +    L   I PN V + ++++  C+ G++
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M      SV PN VT + I+NG  K G +  A      M  +GI  NV TY
Sbjct: 416 DGAEQMLLQM---EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG+ +    E AL +  +M+  G+  NN + +S ++ L   G++E A  +  DM +
Sbjct: 473 GTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGE 532

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  DH  Y+ L  GL + G +  A K+  +++E ++  DA  YN+ IN LC+    + 
Sbjct: 533 RGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSE 592

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK  L  M   GL PD  TY T+I   C+ GN   A+++   MK    KPNL+ Y +++ 
Sbjct: 593 AKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVV 652

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL +   ++ AK LL      G     +TY  ++     +        +   M   G+  
Sbjct: 653 GLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHA 712

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN L++ LC  G  ++A  ++  M+  GI PD +T+  L+    K+   +     +
Sbjct: 713 DITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATY 772

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
             M+  G+SP+  T+N ++  L
Sbjct: 773 AQMLHQGLSPNIATFNTLLGGL 794



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 153/598 (25%), Positives = 266/598 (44%), Gaps = 51/598 (8%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY----EICKA--------- 144
           C  +  L   +R +++L L+G ++S      L     ++D      +I +A         
Sbjct: 333 CTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALS 392

Query: 145 ---TP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
              TP    +  LV A  + G  +GA  ++ +++ K  S ++  +++ L+ LVK   I +
Sbjct: 393 DNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAK 452

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
                ++M   G   NV T+  +I    K    E AL +Y  ML  G+  N    + ++N
Sbjct: 453 AAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512

Query: 260 EACQVGDLEFALKLFRKMG-------------VMSG-------------------DSVLP 287
              + G++E A  LF+ MG             +M G                    ++ P
Sbjct: 513 GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSP 572

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++V +N  IN  C+LG+   A+     M   G++ +  TY T+I    R G++ +AL+L 
Sbjct: 573 DAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLL 632

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EM    + PN + Y + +  L   G VE A ++L++M      P   TY  + +    +
Sbjct: 633 NEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGS 692

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
                  ++H  ++   +  D   YN L++ LC       A  +L  M+ RG+ PD IT+
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITF 752

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI G+CK  +++ A   Y  M      PN+  +N+++ GL     +  A +++   ++
Sbjct: 753 NALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKK 812

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           +GL  + +TY+ L+ GY       EA  ++ EM + G       YN LI+   K G   Q
Sbjct: 813 MGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQ 872

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           A+EL   M   G++    TY  L+  +SK  +  EV  L  DM   G  P   T +++
Sbjct: 873 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSM 930



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 214/468 (45%), Gaps = 9/468 (1%)

Query: 133 EGLLDSY-----EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           E  LD Y     E  +A   + D+LV    + G  E A  + + +  +G  +    +   
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +  L K   +    K+ +E++      +   +N+ I  LC+  K  EA S    M  +G+
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+   +N +I+  C+ G+   ALKL  +M      S+ PN +T+  ++ G  + G VE 
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEM---KWSSIKPNLITYTTLVVGLLEAGVVEK 662

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A+ +   M  AG      TY  ++   +   S    L + + M+  GL  +  VYN+ +H
Sbjct: 663 AKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVH 722

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G    A  VL +M+ + I PD  T++ L  G C++  +  AF  + Q+L + +  
Sbjct: 723 VLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSP 782

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  ++N L+  L  +  +  A  ++  M   GL P+ +TY  L+ GY K  N   A+++Y
Sbjct: 783 NIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLY 842

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
             M      P    YNS+I+   K   ++ AK L    +R G+L  + TY+ L+NG+   
Sbjct: 843 CEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKL 902

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
               E   +  +M+ +G   +K   + +     K G   +AR L+K +
Sbjct: 903 RNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 155/347 (44%), Gaps = 3/347 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A ++ ++ A  + G T  A  ++ ++K      ++  +   +  L++   + +   L  E
Sbjct: 610 ATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNE 669

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M S G+     T+  V+ A          L ++  M+ +G+  ++  +N +++  C  G 
Sbjct: 670 MASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGM 729

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A  +  +M    G  + P+++T N +I G CK   ++ A      M+  G+  N+ T
Sbjct: 730 TRKATIVLDEM---LGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + TL+ G    G   EA  +  EM K GL PNN+ Y+  +     + +   AL +  +M+
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 846

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K   P   TY+ L     + G + QA +L +++    ++  + +Y+IL+N   K  N  
Sbjct: 847 SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGT 906

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
             + LL  M   G  P   T  ++   + K G    A ++ + + KV
Sbjct: 907 EVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/592 (27%), Positives = 285/592 (48%), Gaps = 30/592 (5%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           ++E ++W G  N + HS +    ++  L     F     L+  +     V        ++
Sbjct: 94  SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153

Query: 137 DSYEICKATPAVFDALV---RACTQIGATEGAYDVIQKLKVKG--HSVSIHAWNNFLSHL 191
             Y+     P     L+   R       T  +Y+V+ ++ V G  H V+ + + + LS  
Sbjct: 154 RDYDKA-GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK 212

Query: 192 VK---------------LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           +                +NEI     L ++M   G V N   +  +I++L K  ++ EAL
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            L   M   G  P+   FN +I   C+   +  A K+  +M +       P+ +T+  ++
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG---FAPDDITYGYLM 329

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GL 355
           NG CK+GRV+ A+++ Y + K      +  + TLI G+   G  ++A  +  +MV   G+
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+   YNS I+  + EG V  AL VL DM +K   P+ ++Y+IL  G C+ G + +A+ 
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           + N++  + +  +   +N LI+  CK + +  A ++   M  +G  PD+ T+ +LI G C
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAI 534
           +   I+ A+ +  +M       N V YN++IN   +   +  A+ L+      G  LD I
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN+LI G    G++ +A ++F +M   G A + +  NILIN LC+ G  ++A E  K M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +L G  PD VT+ +L+    +    E+ + +   +   G+ PD  T+N ++S
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 247/507 (48%), Gaps = 34/507 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  +++A   +   + A  +++ +   G   +   +   +  L K N +    +L +EM
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G V +  TFN VI  LCK  ++ EA  +  RML  G  P+ + +  ++N  C++G +
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338

Query: 268 EFALKLFRKM-----------------------------GVMSGDSVLPNSVTHNCIING 298
           + A  LF ++                              +++   ++P+  T+N +I G
Sbjct: 339 DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           + K G V  A E+ + M   G   NV +Y  L+DG+ + G  +EA  + +EM   GL PN
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V +N  I     E  +  A+ +  +M  K   PD +T++ L  GLC    +K A  L  
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            ++ E +V +  +YN LIN   +   +  A++L++ M+ +G   D ITY +LI G C+ G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYN 537
            ++ A  ++E M +    P+ +  N +INGLC+   ++ A     +   R    D +T+N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           +LING    G+I +   MF +++  GI  + V +N L+++LCK G    A  L+   I  
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           G +P++ T++ L+    ++  P+E ++
Sbjct: 699 GFVPNHRTWSILL----QSIIPQETLD 721



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 160/380 (42%), Gaps = 34/380 (8%)

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVV 361
           G  +  + +   M   GI      + +++  Y + G   +  RL  EM       P    
Sbjct: 125 GEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKS 184

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  +  L +    + A  V  DM+ + I P  FT+ ++ K  C    +  A  L   + 
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +   V ++  Y  LI+ L K N +  A QLL  M + G +PD  T+  +I G CK   I 
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL---------- 531
            A ++   M      P+ + Y  ++NGLCK   +DAAK L     +  ++          
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364

Query: 532 -----------------------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
                                  D  TYN+LI GY+  G +  A  +  +MRN G   N 
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             Y IL++  CK G   +A  ++  M   G+ P+ V +  L++ F K     E +E+  +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484

Query: 629 MVLSGVSPDNQTYNAIISPL 648
           M   G  PD  T+N++IS L
Sbjct: 485 MPRKGCKPDVYTFNSLISGL 504


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/477 (30%), Positives = 243/477 (50%), Gaps = 11/477 (2%)

Query: 181 IHAWNNFLSHLVKLNEIGRFW----KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           I  +   LS +VK+   G+++     L K+M   G   N+ T ++ +   C+  +++   
Sbjct: 92  IIQFAKLLSAIVKM---GQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGF 148

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           S+  +++K G+ P +V F  +IN  C+VG+   A++LF  M         P+  T+N II
Sbjct: 149 SVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM---VAKGCQPDVYTYNTII 205

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           NG CK+G    A  +   M +AG   N+ TY+TLID   R     EAL +   M  +G+ 
Sbjct: 206 NGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGIS 265

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+   Y S I  L      + A  +L++M   +I PD  T+++L    C+ G V +A  +
Sbjct: 266 PDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGV 325

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
              + E  +  +  +Y+ L+       ++  A++L   MI +G  P+I +Y  LI+GYCK
Sbjct: 326 LKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCK 385

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAIT 535
              I+ A+Q++  M      PN V YN++I+G C+   L  A+ L +     G L D  T
Sbjct: 386 AKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFT 445

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y+ L++G+   G + +AF +F  M++  +  N V Y IL++ +CK G ++ AR+L   + 
Sbjct: 446 YSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELF 505

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           + G+ P    YTT++    K    +E +E   +M   G  PD  +YN II  LL  K
Sbjct: 506 VQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHK 562



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 221/446 (49%), Gaps = 4/446 (0%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           Q+   +  + V+ K+   G   +I  +   ++ L K+ E  +  +L+ +MV+ G   +V 
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVY 199

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N +I  LCK  +   A  L  +M ++G  PN+V ++ +I+  C+   +  AL +F   
Sbjct: 200 TYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF--- 256

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    + P+  T+  +I G CK  R + A  +   M    I  ++ T+  L+D + + 
Sbjct: 257 SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKE 316

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G   EAL +   M + G+ PN V Y+S ++      DV  A  +   MI K   P+ F+Y
Sbjct: 317 GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +IL  G C+   + +A +L N+++ + +  +  SYN LI+  C+   L  A+ L  +M  
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G +PD+ TY  L+DG+CK G +  A +++  M+    KPNLV+Y  +++ +CK  +   
Sbjct: 437 NGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKD 496

Query: 518 AKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+ L       GL   +  Y T+ING    G + EA   F  M   G   +++ YN++I 
Sbjct: 497 ARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIR 556

Query: 577 FLCKFGCYQQARELMKVMILHGIIPD 602
            L +     +A  L+  M   G I D
Sbjct: 557 GLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 203/381 (53%), Gaps = 5/381 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++ ++    +IG T  A  +++K++  G   ++  ++  +  L +   +    
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            ++  M + G   ++ T+  +I  LCK  + +EA +L   M    I P++V FN++++  
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +  AL + + M  M    V PN VT++ ++ G+     V  A ++ + MI  G  
Sbjct: 314 CKEGKVSEALGVLKTMTEMG---VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCK 370

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+ +Y  LI+GY +    +EA++L +EM+ +GL PNNV YN+ IH     G +  A  +
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M      PD FTYSIL  G C+ G + +AF+L   +   ++  +   Y IL++ +CK
Sbjct: 431 FRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCK 490

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S N   A++L S + V+GL P +  Y T+I+G CK G ++ A++ + NM+     P+ + 
Sbjct: 491 SGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEIS 550

Query: 502 YNSIINGLCKDASLDAAKSLL 522
           YN II GL +    D +++LL
Sbjct: 551 YNVIIRGLLQHK--DESRALL 569



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 219/427 (51%), Gaps = 5/427 (1%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL-EFALKLFRKMGVMSGDSVLPNSV 290
           +++AL+ +  ML     P ++ F  +++   ++G   +  + L ++M ++    + PN  
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVG---LSPNIY 129

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T +  +N FC+L RV+    +   +IK G+   + T+ TLI+G  + G   +A+ L D+M
Sbjct: 130 TLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM 189

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V +G  P+   YN+ I+ L   G+   A  +L  M +    P+  TYS L   LCR+  V
Sbjct: 190 VAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLV 249

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  + + +  + +  D ++Y  LI  LCK +    A  LL+ M    ++PDI+T+  L
Sbjct: 250 NEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVL 309

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +D +CK G +  A+ V + M ++  +PN+V Y+S++ G      +  A+ L       G 
Sbjct: 310 VDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC 369

Query: 531 LDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
              I +YN LINGY    +I EA  +F+EM + G+  N V YN LI+  C+ G  ++A++
Sbjct: 370 KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQD 429

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L + M  +G +PD  TY+ L+  F K     +   L   M  + + P+   Y  ++  + 
Sbjct: 430 LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMC 489

Query: 650 GEKSAED 656
              + +D
Sbjct: 490 KSGNHKD 496



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 171/368 (46%), Gaps = 40/368 (10%)

Query: 134 GLLDSYEI--CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GLL   E   C+     +  L+ +  +      A D+   +K KG S  I  + + +  L
Sbjct: 219 GLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGL 278

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS-------------- 237
            K +       L  EM S   + ++ TFN+++   CKE K+ EAL               
Sbjct: 279 CKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNV 338

Query: 238 ---------------------LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
                                L++ M+  G  PN+  +N++IN  C+   ++ A++LF +
Sbjct: 339 VTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNE 398

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M +  G  + PN+V++N +I+GFC+LG++  A+++   M   G   ++ TY+ L+DG+ +
Sbjct: 399 M-IHQG--LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCK 455

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G   +A RL   M    L PN V+Y   +H +   G+ + A  + S++  + + P    
Sbjct: 456 QGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQL 515

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ +  GLC+ G + +A +    +  +    D  SYN++I  L +  + + A  L+  M 
Sbjct: 516 YTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMR 575

Query: 457 VRGLIPDI 464
            RG I D+
Sbjct: 576 DRGFIADV 583


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/612 (26%), Positives = 300/612 (49%), Gaps = 18/612 (2%)

Query: 49  KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           ++L   +P LT +L+   +   R  P  AL  +           SL S   ++H+L   R
Sbjct: 60  RLLASSSP-LTPALLQAALRRVRLDPDAALHLFRLAPSRP----SLVSHAQLLHILARAR 114

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           RF DA  L+ +L       PL     L + Y     +   FD L+RA    G    A +V
Sbjct: 115 RFHDARALLSSL--PPHAEPL--FPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNV 170

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
              +   G   S+ + N  L+ LV+  + G    +Y +M   G + +  T  ++  A C+
Sbjct: 171 FDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCR 230

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + ++ +A+     M   G+  N+V ++ +++  C +G  E A ++      +    + PN
Sbjct: 231 DGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES---LQRKGLSPN 287

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLC 347
            VT+  ++ G+CK GR+E AE +   M + G I  +   Y  +I+GY + G  ++A R+ 
Sbjct: 288 VVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVR 347

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EM   G+  N  VYN+ I+ L   G +E    VL +M D  + PD ++Y+ L  G CR 
Sbjct: 348 NEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCRE 407

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +++AF++   ++   +     +YN L+   C  + +  A +L   M+ RG+ P+ I+ 
Sbjct: 408 GSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISC 467

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TL+DG  K G  E A+ +++         N++ +N++INGLCK   +  A+ LL   + 
Sbjct: 468 STLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI--NFLCKFGCY 584
           +    D++TY TL +GY   G++  A  + ++M ++G A +   +N  I  +F+ K   +
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ--W 585

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +  ++   M   G+ P+ VTY  L+  + K  +  E   L+ +MV +G++P+    +A+
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 645 ISPLLGEKSAED 656
           +S    E   ++
Sbjct: 646 MSCFYKEGKVDE 657



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 261/553 (47%), Gaps = 65/553 (11%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ ++    ++G  E    V+Q+++  G     +++N  +    +   + + +++ + M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G      T+N ++   C    +++AL L++ MLK G+ PN +  + +++   + G  
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL L+++        +  N +T N +ING CK+GR+  AEE+   M +     +  TY
Sbjct: 481 EQALNLWKET---LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 328 ATLIDGYARGGSSEEALRLCD-----------------------------------EMVK 352
            TL DGY + G    A  L +                                   EM  
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RGL PN V Y + I     EG++  A  +  +M++  + P+ F  S L     + G V +
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 413 AFKLHNQVLEEHMV----------------------GDAYSYNILINY----LCKSNNLA 446
           A  +  +++   M+                      G+ +S N++ N     LCKS  +A
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK L  S+  +  +PD  TY +LI G    G+I+ A  + + M      PN++ YNS+I
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLCK   L  A +L    Q  G+  + ITYNTLI+ Y   GK  EAF +  +M   GI 
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQ 837

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
              + Y+ILI  LC  G  ++A +L+  MI + + P+Y+TY TL+  + K+ + EE+ +L
Sbjct: 838 PTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKL 897

Query: 626 HDDMVLSGVSPDN 638
           +D+M + G+ P N
Sbjct: 898 YDEMHIRGLLPTN 910



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 150/598 (25%), Positives = 265/598 (44%), Gaps = 101/598 (16%)

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG-YVENVN 217
           +G TE A  +++ L+ KG S ++  +   +    K   +    ++ KEM   G  V +  
Sbjct: 266 MGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV 325

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            + ++I   C+  ++++A  +   M  +GI  N+  +N +IN  C++G +E   K+ ++M
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             +    + P+  ++N +I+G+C+ G +  A E+   M++ G+     TY TL+ G+   
Sbjct: 386 EDVG---MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            + ++ALRL   M+KRG+ PN +  ++ +  LF  G  E AL +  + + + +  +  T+
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL----- 452
           + +  GLC+ G + +A +L +++ E     D+ +Y  L +  CK   L  A  L+     
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562

Query: 453 ------------------------------SSMIVRGLIPDIITYGTLIDGYC------- 475
                                         S M  RGL P+++TYG LI G+C       
Sbjct: 563 LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622

Query: 476 ----------------------------KGGNIEGAVQVYENMKKVEKKPNL-------- 499
                                       K G ++ A  V + +  ++  P          
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682

Query: 500 ------------------VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
                             V++N II GLCK   +  AKSL ++ +    L D  TY++LI
Sbjct: 683 KISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLI 742

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G   +G I EAF++   M + G+  N + YN LI  LCK G   +A  L   +   GI 
Sbjct: 743 HGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           P+ +TY TL+  + K     E  +L   MV  G+ P   TY+ +I  L  +   E+ +
Sbjct: 803 PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAI 860



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 261/557 (46%), Gaps = 66/557 (11%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           + +A  + G    A + +++++  G  V++ A++  +     +       ++ + +   G
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMIINEACQVGDLEFA 270
              NV T+ L++   CK+ ++EEA  +   M ++G I  + V + M+IN  CQ G ++ A
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA 343

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            ++  +M       +  N   +N +ING CKLGR+E  +++   M   G+  +  +Y TL
Sbjct: 344 TRVRNEM---RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDGY R GS  +A  +C  MV+ GL    + YN+ +    +   ++ AL +   M+ + +
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  + S L  GL + G  +QA  L  + L   +  +  ++N +IN LCK   +A A++
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK------------------ 492
           LL  M      PD +TY TL DGYCK G +  A  +   M+                   
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580

Query: 493 VEKK-----------------PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           + K+                 PNLV Y ++I G CK+ +L  A +L       G+  +  
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVF 640

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVG---------IAVNKVGY-------------N 572
             + L++ ++  GK+ EA  +  ++ N+          I ++K+ +             N
Sbjct: 641 ICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700

Query: 573 ILINF----LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           ++ N     LCK G    A+ L + +     +PD  TY++L+   + + S +E   L D 
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 629 MVLSGVSPDNQTYNAII 645
           M+ +G++P+  TYN++I
Sbjct: 761 MLSAGLTPNIITYNSLI 777



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 187/384 (48%), Gaps = 27/384 (7%)

Query: 133 EGLLDSYEICKATPA--VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           E LLD  +  +  P    +  L     ++G    A  ++ K++  G + S+  +N+F++ 
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
                +  +   ++ EM + G   N+ T+  +I   CKE  L EA +LY+ M+ +G+ PN
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638

Query: 251 VV-------CF---------NMIINE--------ACQVGDLEFALKLFRKMGVMSGDSVL 286
           V        CF         N+++ +         C +  +E   K+   +  ++  +  
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID-KISHVVDTIADGNPH 697

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
             +V  N II G CK GR+  A+ +  ++       +  TY++LI G A  GS +EA  L
Sbjct: 698 SANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL 757

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D M+  GL PN + YNS I+ L   G +  A+ + + +  K I P+  TY+ L    C+
Sbjct: 758 RDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G   +AFKL  +++EE +     +Y+ILI  LC    +  A +LL  MI   + P+ IT
Sbjct: 818 EGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYIT 877

Query: 467 YGTLIDGYCKGGNIEGAVQVYENM 490
           Y TLI GY K GN+E   ++Y+ M
Sbjct: 878 YCTLIHGYIKSGNMEEISKLYDEM 901



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 3/167 (1%)

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           I   + L   M+S G   N+ T+N +IY LCK  KL  A++L+ ++   GI PN + +N 
Sbjct: 751 IDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNT 810

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I+E C+ G    A KL +KM     + + P  +T++ +I G C  G +E A ++   MI
Sbjct: 811 LIDEYCKEGKTTEAFKLKQKM---VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMI 867

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +  +D N  TY TLI GY + G+ EE  +L DEM  RGL+P N + N
Sbjct: 868 ENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 116/219 (52%), Gaps = 4/219 (1%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           HS ++  WN  +  L K   I     L++ + +  ++ +  T++ +I+       ++EA 
Sbjct: 697 HSANV-MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           SL   ML +G+ PN++ +N +I   C+ G L  A+ LF K+       + PN +T+N +I
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL---QSKGISPNGITYNTLI 812

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           + +CK G+   A +++  M++ GI   V TY+ LI G    G  EEA++L D+M++  + 
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVD 872

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           PN + Y + IH     G++E    +  +M  + + P ++
Sbjct: 873 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/481 (32%), Positives = 247/481 (51%), Gaps = 9/481 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     V+  L+ A  ++G       +++++ + G    ++ +N+ +  L K+  I    
Sbjct: 248 CVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAA 307

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINE 260
           KL   M+  G+  N  T+ ++++ LC+  K++EA     RML + +  PNVV FN +IN 
Sbjct: 308 KLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA-----RMLLNKVPNPNVVLFNTLING 362

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
               G L+ A  +  +  +  G    P+  T+N +I G CK G +  A E+   M   G 
Sbjct: 363 YVSRGRLDEAKAVMHESMLSVGCG--PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGC 420

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + NV TY  LID + + G  EEA  + DEM  +GL  N V YN  I  L  +  V+ AL 
Sbjct: 421 EPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALN 480

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +  DM  K   PD FT++ L  GLC+    ++A  L+  +L E ++ +  +YN LI+   
Sbjct: 481 MFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFL 540

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +   +  A +L++ M+ RG   D ITY  LI   C+ GNIE  + ++E+M      PN +
Sbjct: 541 RRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNI 600

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
             N +INGLC+  ++  A   L+     GL  D +TYN+LING    G+  EA  +F ++
Sbjct: 601 SCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKL 660

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           +  GI  + + YN LI++ CK G +  A  L+   +  G IP+ VT+  LV+ F K    
Sbjct: 661 QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQ 720

Query: 620 E 620
           E
Sbjct: 721 E 721



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 250/482 (51%), Gaps = 9/482 (1%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           +V  ++  KG S +++ +   +  L  +NE+     L K+M   G V N   +  +I+AL
Sbjct: 203 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHAL 262

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
            K  ++ E L L   ML  G  P+V  FN  I+  C++  +  A KL  +M ++ G +  
Sbjct: 263 XKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRM-LLRGFT-- 319

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PNS T+  +++G C++G+V+   E R  + K   + NV  + TLI+GY   G  +EA  +
Sbjct: 320 PNSFTYGVLMHGLCRMGKVD---EARMLLNKVP-NPNVVLFNTLINGYVSRGRLDEAKAV 375

Query: 347 CDE-MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
             E M+  G  P+   YN+ I  L  +G +  A  ++++M  K   P+  TY+IL    C
Sbjct: 376 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 435

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G +++A  + +++  + +  +A  YN LI+ LCK   +  A  +   M  +G  PDI 
Sbjct: 436 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 495

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           T+ +LI G CK    E A+ +Y++M       N + YN++I+   +  ++  A  L+   
Sbjct: 496 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 555

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G  LD ITYN LI      G I +  A+F +M + G+  N +  NILIN LC+ G  
Sbjct: 556 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 615

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           Q A E ++ MI  G+ PD VTY +L+    K    +E + L D + + G+ PD  TYN +
Sbjct: 616 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 675

Query: 645 IS 646
           IS
Sbjct: 676 IS 677



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 200/414 (48%), Gaps = 44/414 (10%)

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           +++Y ML  GI P V  F +++   C V +++ A  L + M              H C+ 
Sbjct: 203 NVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM------------TRHGCVP 250

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           N                             Y TLI    + G   E L+L +EM+  G +
Sbjct: 251 NAI--------------------------VYQTLIHALXKVGRVNEVLKLLEEMLLMGCI 284

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+   +N  IH L     +  A  ++  M+ +   P+ FTY +L  GLCR G V +A  L
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL-SSMIVRGLIPDIITYGTLIDGYC 475
            N+V   ++V     +N LIN       L  AK ++  SM+  G  PDI TY TLI G C
Sbjct: 345 LNKVPNPNVV----LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K G +  A ++   M+    +PN++ Y  +I+  CK+  L+ A+++L      GL L+A+
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 460

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN LI+    + K+ +A  MF +M + G   +   +N LI  LCK   +++A  L + M
Sbjct: 461 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 520

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L G+I + +TY TL+  F +  + +E ++L +DM+  G   D+ TYN +I  L
Sbjct: 521 LLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 219/451 (48%), Gaps = 10/451 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY    + + ++I  L    + +   +L  +M + GI      F +I+    + G    A
Sbjct: 106 GYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQA 165

Query: 271 LKLFRKM-GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
            +L   M GV S +   P   ++N +++        +    + Y M+  GI   V T+  
Sbjct: 166 TRLLLDMRGVYSCE---PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 222

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           ++         + A  L  +M + G +PN +VY + IH L   G V   L +L +M+   
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMG 282

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             PD  T++    GLC+   + +A KL +++L      ++++Y +L++ LC+   +  A+
Sbjct: 283 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEAR 342

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV-YENMKKVEKKPNLVIYNSIING 508
            LL+ +      P+++ + TLI+GY   G ++ A  V +E+M  V   P++  YN++I G
Sbjct: 343 MLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 398

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK   L +A+ L+   Q  G   + ITY  LI+ +   G++ EA  +  EM   G+A+N
Sbjct: 399 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 458

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            VGYN LI+ LCK    Q A  +   M   G  PD  T+ +L+    K    EE + L+ 
Sbjct: 459 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           DM+L GV  +  TYN +I   L   + ++ +
Sbjct: 519 DMLLEGVIANTITYNTLIHAFLRRGAMQEAL 549



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 56/118 (47%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+    + G  + A + ++ +  +G +  I  +N+ ++ L K         L+ ++   G
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
              +  T+N +I   CKE   ++A  L  R + SG  PN V + ++++   + GD EF
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 722


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 180/625 (28%), Positives = 291/625 (46%), Gaps = 54/625 (8%)

Query: 61  SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
            L+ RV++  R  P +AL F+ W      F  S  +   I+ +L        A  +M  +
Sbjct: 48  QLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKV 107

Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
           +S         +E  +    I      ++        +    E    V  K+  KG    
Sbjct: 108 VSVK-------MENGVVDVLILDLLLWIY-------AKKSMLEKCLLVFYKMVSKGMLPD 153

Query: 181 IHAWNNFLSHLV-KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           +   N  L  L  + + I    ++Y  MV CG    V T+N ++ + CK+ K++EAL L 
Sbjct: 154 LKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLL 213

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GV----------------- 279
            +M K G  PN V +N+++N     G+LE A +L ++M   G+                 
Sbjct: 214 LQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEK 273

Query: 280 ------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                       M     +P  VT+N I+ G CK GRV  A ++   M+   +  ++ +Y
Sbjct: 274 GQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSY 333

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI GY R G+  EA  L  E+  RGL+P+ V YN+ I  L   GD++ A+ +  +MI 
Sbjct: 334 NTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIK 393

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD FT++IL +G C+ G +  A +L +++L   +  D ++Y   I    K  + + 
Sbjct: 394 HGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 453

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M+ RG  PD+ITY   IDG  K GN++ A ++ + M      P+ V Y SII+
Sbjct: 454 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIH 513

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
                  L  A+++       G+  ++ TY  LI+ Y + G++  A   F EM   G+  
Sbjct: 514 AHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHP 573

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP---EEVI 623
           N + YN LIN LCK     QA +    M   GI P+  TYT L+   ++NC+    +E +
Sbjct: 574 NVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI---NENCNLGHWQEAL 630

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            L+ DM+   + PD+ T++A++  L
Sbjct: 631 RLYKDMLDREIQPDSCTHSALLKHL 655



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 274/576 (47%), Gaps = 58/576 (10%)

Query: 54  MAPSLTN-SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           M P L N + V R++ +   S  +A E Y  + E           C I   +V +    D
Sbjct: 150 MLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVE-----------CGIRPTVVTYNTMLD 198

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEI-CKATPAVFDALVRACTQIGATEGAYDVIQK 171
           +    G +  A        L+ LL   ++ C      ++ LV   +  G  E A ++IQ+
Sbjct: 199 SFCKQGKVQEA--------LQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQE 250

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G  VS + ++  +    +  ++    +L +EM+S G V  + T+N ++Y LCK  +
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR 310

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + +A  L   M+   + P++V +N +I    ++G++  A  LF ++       ++P+ VT
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF---RGLVPSVVT 367

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I+G C++G ++ A  ++  MIK G D +V T+  L+ G+ + G+   A  L DEM+
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            RGL P+   Y + I      GD   A  +  +M+ +   PD  TY++   GL + G +K
Sbjct: 428 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 487

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A +L  ++L   +V D  +Y  +I+    + +L  A+ +   M+ +G+ P ++TY  LI
Sbjct: 488 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLI 547

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
             Y   G ++ A+  +  M +    PN++ YN++INGLCK   +D               
Sbjct: 548 HSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD--------------- 592

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                              +A+  F+EM+  GI+ NK  Y ILIN  C  G +Q+A  L 
Sbjct: 593 -------------------QAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLY 633

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
           K M+   I PD  T++ L+   +K+     V  L +
Sbjct: 634 KDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHLEN 669


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 267/538 (49%), Gaps = 9/538 (1%)

Query: 43  LRQRKWKILEQMAPSLTN-SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           + +++W IL+      +    +++++      P L L ++ W       ++S+E  C ++
Sbjct: 55  ISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLL 114

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK----ATPAVFDALVRACT 157
           +LL N + +     ++ + +   +   +  +     S  +C     A   + D LV A  
Sbjct: 115 NLLANAKHYPKIRSILDSFVKGETNCSISLI---FHSLSVCSGQFCANSIIADMLVLAYV 171

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +   T    +  ++     + +S+ + N  LS LVK NE G    +YKEM+      N+ 
Sbjct: 172 ENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLI 231

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           TFN VI  LCK  KL +A  +   M   G WPNVV +N +I+  C++G +    K    +
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M  + V PNSVT N +I+GFCK   +  A ++   M   G+   V TY +L++G    
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE 351

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G   EA  L DEM+   L PN + YN+ I+    +  +E A  +  ++  + + P+  T+
Sbjct: 352 GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G C+ G +++AF L   +LE+  + +A +YN LI   C+   +   K LL+ M  
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RG+  D +TY  LI  +C+    + A ++ + M     KP+ + YN ++NG C + +L A
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531

Query: 518 AKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           A +L +  ++ G   + +TYN LI GY   GK+ +A  + +EM   G+  N+  Y I+
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 201/391 (51%), Gaps = 10/391 (2%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +EF  K       M    + PN +T N +ING CK+G++  A ++   M   G   
Sbjct: 210 EFGGVEFVYK------EMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWP 263

Query: 323 NVRTYATLIDGY---ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           NV TY TLIDGY    R G   +A  +  EMV+  + PN+V +N  I     + ++  AL
Sbjct: 264 NVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAAL 323

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +M  + + P   TY+ L  GLC  G + +A  L +++L  ++  +  +YN LIN  
Sbjct: 324 KVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGY 383

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   L  A++L  ++  +GL P++IT+ TL+ GYCK G +E A  + + M +    PN 
Sbjct: 384 CKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNA 443

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             YN +I G C++  ++  K+LL   Q  G+  D +TYN LI+ +    +  +A  +  E
Sbjct: 444 STYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDE 503

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G+  + + YNIL+N  C  G  + A  L K M   G   + VTY  L+  + +   
Sbjct: 504 MLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGK 563

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            E+   L ++M+  G+ P+  TY  I   ++
Sbjct: 564 LEDANGLLNEMLEKGLIPNRTTYEIIKEEMM 594



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 196/386 (50%), Gaps = 16/386 (4%)

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           K+ V+S + +L   V  N       + G VEF   +   MI+  I  N+ T+ T+I+G  
Sbjct: 192 KLSVLSCNPLLSALVKEN-------EFGGVEF---VYKEMIRRKISPNLITFNTVINGLC 241

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF----VLSDMIDKHIC 391
           + G   +A  + D+M   G  PN V YN+ I      G V G ++    +L +M++  + 
Sbjct: 242 KVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRV-GKMYKADAILKEMVENKVS 300

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  T+++L  G C++  +  A K+  ++  + +     +YN L+N LC    L  AK L
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M+   L P++ITY  LI+GYCK   +E A ++++N+ K    PN++ +N++++G CK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK 420

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              ++ A  L +     G L +A TYN LI G+   GK+ E   + +EM+  G+  + V 
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVT 480

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YNILI+  C+    ++A  L+  M+  G+ P ++TY  L+  +    +    + L   M 
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G   +  TYN +I     +   ED
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLED 566



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 136/303 (44%), Gaps = 40/303 (13%)

Query: 143 KATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K +P    F+ L+    +      A  V ++++ +G   ++  +N+ ++ L    ++   
Sbjct: 298 KVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEA 357

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             L  EM+S     NV T+N +I   CK+  LEEA  L+  + K G+ PNV+ FN +++ 
Sbjct: 358 KVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG 417

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI------------------------- 295
            C+ G +E A  L +   VM     LPN+ T+NC+                         
Sbjct: 418 YCKFGKMEEAFLLQK---VMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGV 474

Query: 296 ----------INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
                     I+ +C+    + A  +   M+  G+  +  TY  L++GY   G+   AL 
Sbjct: 475 KADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALN 534

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L  +M K G   N V YN  I     +G +E A  +L++M++K + P+  TY I+ + + 
Sbjct: 535 LRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMM 594

Query: 406 RNG 408
             G
Sbjct: 595 EKG 597



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 58/125 (46%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KA    ++ L+ A  +    + A  +I ++  KG   S   +N  L+       +     
Sbjct: 475 KADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALN 534

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L K+M   G   NV T+N++I   C++ KLE+A  L   ML+ G+ PN   + +I  E  
Sbjct: 535 LRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMM 594

Query: 263 QVGDL 267
           + G L
Sbjct: 595 EKGFL 599


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/612 (26%), Positives = 300/612 (49%), Gaps = 18/612 (2%)

Query: 49  KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           ++L   +P LT +L+   +   R  P  AL  +           SL S   ++H+L   R
Sbjct: 60  RLLASSSP-LTPALLQAALRRVRLDPDAALHLFRLAPSRP----SLVSHAQLLHILARAR 114

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           RF DA  L+ +L       PL     L + Y     +   FD L+RA    G    A +V
Sbjct: 115 RFHDARALLSSL--PPHAEPL--FPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNV 170

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
              +   G   S+ + N  L+ LV+  + G    +Y +M   G + +  T  ++  A C+
Sbjct: 171 FDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCR 230

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + ++ +A+     M   G+  N+V ++ +++  C +G  E A ++      +    + PN
Sbjct: 231 DGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILES---LQRKGLSPN 287

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLC 347
            VT+  ++ G+CK GR+E AE +   M + G I  +   Y  +I+GY + G  ++A R+ 
Sbjct: 288 VVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVR 347

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EM   G+  N  VYN+ I+ L   G +E    VL +M D  + PD ++Y+ L  G CR 
Sbjct: 348 NEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCRE 407

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +++AF++   ++   +     +YN L+   C  + +  A +L   M+ RG+ P+ I+ 
Sbjct: 408 GSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISC 467

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TL+DG  K G  E A+ +++         N++ +N++INGLCK   +  A+ LL   + 
Sbjct: 468 STLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE 527

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI--NFLCKFGCY 584
           +    D++TY TL +GY   G++  A  + ++M ++G A +   +N  I  +F+ K   +
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ--W 585

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +  ++   M   G+ P+ VTY  L+  + K  +  E   L+ +MV +G++P+    +A+
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 645 ISPLLGEKSAED 656
           +S    E   ++
Sbjct: 646 MSCFYKEGKVDE 657



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 257/538 (47%), Gaps = 46/538 (8%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ ++    ++G  E    V+Q+++  G     +++N  +    +   + + +++ + M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM 420

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G      T+N ++   C    +++AL L++ MLK G+ PN +  + +++   + G  
Sbjct: 421 VRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKT 480

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL L+++        +  N +T N +ING CK+GR+  AEE+   M +     +  TY
Sbjct: 481 EQALNLWKE---TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTY 537

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL DGY + G    A  L ++M   G  P+  ++NS I   F          + S+M  
Sbjct: 538 RTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA 597

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P+  TY  L  G C+ G + +A  L+ +++   M  + +  + L++   K   +  
Sbjct: 598 RGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDE 657

Query: 448 AKQLLSSMIVRGLIP----------------DIITYG----------TLIDGYCKGGNIE 481
           A  +L  ++   +IP                D I  G           +I G CK G I 
Sbjct: 658 ANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIA 717

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A  ++E+++     P+   Y+S+I+G     S+D A SL       GL  + ITYN+LI
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI 777

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG-- 598
            G   +GK++ A  +F+++++ GI+ N + YN LI+  CK G   +A +L + M+  G  
Sbjct: 778 YGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYM 837

Query: 599 --------------IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
                         + P+Y+TY TL+  + K+ + EE+ +L+D+M + G+ P N   N
Sbjct: 838 EEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 895



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 261/557 (46%), Gaps = 66/557 (11%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           + +A  + G    A + +++++  G  V++ A++  +     +       ++ + +   G
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMIINEACQVGDLEFA 270
              NV T+ L++   CK+ ++EEA  +   M ++G I  + V + M+IN  CQ G ++ A
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDA 343

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            ++  +M       +  N   +N +ING CKLGR+E  +++   M   G+  +  +Y TL
Sbjct: 344 TRVRNEM---RDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTL 400

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDGY R GS  +A  +C  MV+ GL    + YN+ +    +   ++ AL +   M+ + +
Sbjct: 401 IDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGV 460

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  + S L  GL + G  +QA  L  + L   +  +  ++N +IN LCK   +A A++
Sbjct: 461 APNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEE 520

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK------------------ 492
           LL  M      PD +TY TL DGYCK G +  A  +   M+                   
Sbjct: 521 LLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF 580

Query: 493 VEKK-----------------PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           + K+                 PNLV Y ++I G CK+ +L  A +L       G+  +  
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVF 640

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVG---------IAVNKVGY-------------N 572
             + L++ ++  GK+ EA  +  ++ N+          I ++K+ +             N
Sbjct: 641 ICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSAN 700

Query: 573 ILINF----LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           ++ N     LCK G    A+ L + +     +PD  TY++L+   + + S +E   L D 
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 629 MVLSGVSPDNQTYNAII 645
           M+ +G++P+  TYN++I
Sbjct: 761 MLSAGLTPNIITYNSLI 777



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/601 (24%), Positives = 263/601 (43%), Gaps = 117/601 (19%)

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG-YVENVN 217
           +G TE A  +++ L+ KG S ++  +   +    K   +    ++ KEM   G  V +  
Sbjct: 266 MGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV 325

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            + ++I   C+  ++++A  +   M  +GI  N+  +N +IN  C++G +E   K+ ++M
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             +    + P+  ++N +I+G+C+ G +  A E+   M++ G+     TY TL+ G+   
Sbjct: 386 EDVG---MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSL 442

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            + ++ALRL   M+KRG+ PN +  ++ +  LF  G  E AL +  + + + +  +  T+
Sbjct: 443 HAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITF 502

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL----- 452
           + +  GLC+ G + +A +L +++ E     D+ +Y  L +  CK   L  A  L+     
Sbjct: 503 NTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562

Query: 453 ------------------------------SSMIVRGLIPDIITYGTLIDGYC------- 475
                                         S M  RGL P+++TYG LI G+C       
Sbjct: 563 LGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHE 622

Query: 476 ----------------------------KGGNIEGAVQVYENMKKVEKKPNL-------- 499
                                       K G ++ A  V + +  ++  P          
Sbjct: 623 ACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEID 682

Query: 500 ------------------VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
                             V++N II GLCK   +  AKSL ++ +    L D  TY++LI
Sbjct: 683 KISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLI 742

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G   +G I EAF++   M + G+  N + YN LI  LCK G   +A  L   +   GI 
Sbjct: 743 HGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS 802

Query: 601 PDYVTYTTLVTRFSKNCSP----------------EEVIELHDDMVLSGVSPDNQTYNAI 644
           P+ +TY TL+  + K                    EE I+L D M+ + V P+  TY  +
Sbjct: 803 PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTL 862

Query: 645 I 645
           I
Sbjct: 863 I 863


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 284/536 (52%), Gaps = 18/536 (3%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKS-PKLAL-EFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           L+++ PSLT+  +  +++    S P L+L  F+ ++     F H+L +   + H L +  
Sbjct: 54  LKRILPSLTSHHITNLINLNPLSLPPLSLFSFFNYLASRPPFRHTLHNYSTMAHFLSSHN 113

Query: 109 RFDDA----LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
                    L ++  +   +S S +  L   + ++     +  VFDAL+ A T     E 
Sbjct: 114 LLSQTHSLFLFIISKMGHHSSTSLISSLIQTVPTHHRHNHSVLVFDALIIAYTDSEFIED 173

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE-IGRFWKLYKEMVSCGYVENVNTFNLVI 223
           A   ++ +K    S+ +   +  L  ++KLN+  G  W+ Y E++  GY  NV  FN+++
Sbjct: 174 AIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILM 233

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE--FALKLFRKMGVMS 281
           +  CK   +  A  ++  + + G+ P+VV FN +I+  C+  ++E  F LK      VM 
Sbjct: 234 HGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLK-----SVME 288

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
            + + P+  T++ +ING CK  RVE A  +   M + G+  N  T+ TLIDG  + G  +
Sbjct: 289 SERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKID 348

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            ALR  + M  RG+ P+ + YN+ I+ L  +GD++ A  +L++MI     PD  T++ L 
Sbjct: 349 LALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLM 408

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G C++G +  A ++ ++++EE +  D  ++  LI+ LC+   +  A+++L  M+  G  
Sbjct: 409 DGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHK 468

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD  TY  +ID +CK G+++   ++ + M++  + P +V YN+++NG CK   +  AK L
Sbjct: 469 PDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKML 528

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           L A   + ++ + IT+N L++G+  +G   + F +F+  +  G+  +   Y  L+N
Sbjct: 529 LHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFNGEK--GLVSDYASYTALVN 581



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 1/299 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E++  G  PN  ++N  +H     GDV  A  V  ++  + + P   +++ L  G CR+ 
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V++ F L + +  E +  D ++Y+ LIN LCK + +  A  L   M   GL+P+ +T+ 
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG CK G I+ A++ +E MK    +P+L+ YN++INGLC+D  L  A+ LL      
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G   D IT+ TL++G   +G +  A  +   M   GI ++ V +  LI+ LC+ G  + A
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             ++K M+  G  PD  TYT ++  F K    +   +L  +M   G  P   TYNA+++
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMN 514



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 194/373 (52%), Gaps = 6/373 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN    N +++GFCK+G V  A  +   + + G+  +V ++ TLI GY R  + EE   L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M    + P+   Y++ I+ L  E  VE A  +  +M +  + P+  T++ L  G C+
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +G +  A +    + +  +  D  +YN LIN LC+  +L  A++LL+ MI  G  PD IT
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           + TL+DG CK G+++ A+++ + M +   + + V + ++I+GLC+D  +  A+ +L+   
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463

Query: 527 RIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G   D  TY  +I+ +   G +     +  EM+  G     V YN L+N  CK G  +
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A+ L+  M+   ++P+ +T+  L+    K+ S  +    + +    G+  D  +Y A++
Sbjct: 524 NAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGE---KGLVSDYASYTALV 580

Query: 646 SPLLGEKSAEDQV 658
           +  +  K ++DQ+
Sbjct: 581 NESI--KISKDQL 591



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 171/337 (50%), Gaps = 1/337 (0%)

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E    ++  G   NV  +  L+ G+ + G    A  + DE+ +RGL P+ V +N+ I   
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               +VE    + S M  + I PD FTYS L  GLC+   V++A  L +++ E  +V + 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++  LI+  CK   +  A +    M  RG+ PD+ITY  LI+G C+ G+++ A ++   
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M     KP+ + + ++++G CKD  +D+A  +       G+ LD + +  LI+G   +G+
Sbjct: 392 MIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGR 451

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +A  M  +M + G   +   Y ++I+  CK G  +   +L+K M   G +P  VTY  
Sbjct: 452 VRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNA 511

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           L+  F K    +    L   M+   V P++ T+N ++
Sbjct: 512 LMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILL 548



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 136/239 (56%), Gaps = 1/239 (0%)

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           +VL+     + Y +NIL++  CK  ++  A+ +   +  RGL P ++++ TLI GYC+  
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
           N+E    +   M+     P++  Y+++INGLCK++ ++ A  L      +GL+ + +T+ 
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLI+G   +GKI  A   F  M++ GI  + + YN LIN LC+ G  ++AR+L+  MI +
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           G  PD +T+TTL+    K+   +  +E+ D MV  G+  D+  + A+IS L  +    D
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD 454



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%)

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
           +N +    +  + E+ + G   N   +NIL++  CK G    AR +   +   G+ P  V
Sbjct: 203 LNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVV 262

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++ TL++ + ++ + EE   L   M    +SPD  TY+A+I+ L  E   E+
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEE 314


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 180/629 (28%), Positives = 292/629 (46%), Gaps = 50/629 (7%)

Query: 61  SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
            L+ RV++  R  P +AL F+ W      F  S  S   I+ +L        A  +M  +
Sbjct: 48  KLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKV 107

Query: 121 MSANSVSPLEFLEGLLD---SYEIC-KATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           +S      ++   G++D   S E+   +   + D L+    +    E    V  K+  KG
Sbjct: 108 VS------VKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKG 161

Query: 177 HSVSIHAWNNFLSHLV-KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
               +   N  L  L  + N I    ++Y  MV CG    V T+N ++ + CK+  ++EA
Sbjct: 162 LLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEA 221

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-------GVMSGDSVL-- 286
           L L ++M   G  PN V +N+++N     G++E A +L + M        V + D ++  
Sbjct: 222 LQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRG 281

Query: 287 -----------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
                                  P  VT+N I+ G CK GRV  A ++   M+   +  +
Sbjct: 282 YCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 341

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + +Y TLI GY R G+  EA  L  E+  R L P+ V YN+ I  L   GD++ A+ +  
Sbjct: 342 LVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKD 401

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +MI     PD FT++   +G C+ G +  A +L +++L   +  D ++Y   I    K  
Sbjct: 402 EMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 461

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           + + A  +   M+ RG  PD+ITY   IDG  K GN++ A ++ + M      P+ V Y 
Sbjct: 462 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 521

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
           SII+       L  A++L       G+  ++ TY  LI+ Y + G++  A   F EM   
Sbjct: 522 SIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 581

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP--- 619
           G+  N + YN LIN LCK     QA      M   GI P+  TYT L+   ++NC+    
Sbjct: 582 GVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILI---NENCNLGHW 638

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +E + L+ DM+   + PD+ T+ +++  L
Sbjct: 639 QEALRLYKDMLDREIQPDSCTHRSLLKHL 667



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 238/475 (50%), Gaps = 37/475 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ LV   +  G  E A ++IQ +   G  VS++ ++  +    +  +I    
Sbjct: 233 CSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEAS 292

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L +EM+S G V  V T+N ++Y LCK  ++ +A  L   M+   + P++V +N +I   
Sbjct: 293 RLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGY 352

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            ++G++  A  LF ++      S+ P+ VT+N +I+G C+LG ++ A  ++  MIK G D
Sbjct: 353 TRLGNIGEAFLLFAELRY---RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPD 409

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+ T + G+ + G+   A  L DEM+ RGL P+   Y + I      GD   A  +
Sbjct: 410 PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGM 469

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ +   PD  TY++   GL + G +K+A +L  ++L   +V D  +Y  +I+    
Sbjct: 470 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L  A+ L   M+ +G+ P ++TY  LI  Y   G ++ A+  +  M +    PN++ 
Sbjct: 530 AGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVIT 589

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YN++INGLCK   +D                                  +A+  F+EM+ 
Sbjct: 590 YNALINGLCKVRKMD----------------------------------QAYNFFAEMQA 615

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            GI+ NK  Y ILIN  C  G +Q+A  L K M+   I PD  T+ +L+   +K+
Sbjct: 616 KGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKD 670


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 263/523 (50%), Gaps = 23/523 (4%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F+E  + +Y+   + P  FD L+           +  ++ +L+  G S S  + N  L  
Sbjct: 183 FVEQFISTYKAFSSDPVSFDLLLLCLP-------SAPLLLRLRQYGISPSPESCNAVLCR 235

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L  L+E  + ++   E  +C Y       N+++ ALC   ++++A  L+  M      P+
Sbjct: 236 L-PLDEAVQLFQELPEKNTCSY-------NILLKALCTAGRIKDAHQLFDEMASP---PD 284

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV + ++++  C + +LE A+KL  +M     +    N V +  +I   C  G+V  A  
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL---NPVAYTSVIALLCDEGQVSDAVR 341

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+  G+  +   + T++ G+ R G    A    DEM KRGL  + V Y + I+ L 
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+++ A  VL +M DK +  D  TY++L  G C+ G + +AF +HN+++++ +  +  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  L + LCK  ++ AA +LL  M  +GL  +I TY +LI+G CK GN+E A++   +M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
            +   KP++  Y +II  LC+   LD A SLLQ     G+   I TYN L+NG+ ++G++
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
                +   M    I  N   YN L+   C     +   E+ K M+   ++P+  TY  L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    K  + +E +  H +M+  G      +YNA+I  LL +K
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR-LLNKK 683



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 203/422 (48%), Gaps = 8/422 (1%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P  + +++      G    A  V++ + + G  +    +   +S   +  ++      + 
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM   G   +  T+  +I  LC+  +L+EA  +   M   G+  + V + ++I+  C+VG
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +  A  +  KM       V PN VT+  + +G CK G V  A E+ + M   G++ N+ 
Sbjct: 440 KMTEAFLVHNKM---VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY +LI+G  + G+ E+A+R   +M + GL P+   Y + I  L    +++ A  +L +M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +DK I P   TY++L  G C +G V+   +L   +LE+++  +  +YN L+   C   N+
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI--YN 503
            +  ++   M+ + ++P+  TY  LI G+CK  N++ A+  +  M  +EK   L    YN
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM--IEKGFRLTASSYN 674

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  L K      A+ L +  ++  L  +   YN  I+  F    +    A+  E+  V
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEV 734

Query: 563 GI 564
            +
Sbjct: 735 TL 736



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 185/388 (47%), Gaps = 3/388 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           AVF  ++    + G    A +   +++ +G +     +   ++ L +  E+    ++ +E
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQE 415

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   +  T+ ++I   CK  K+ EA  ++ +M++  + PNVV +  + +  C+ GD
Sbjct: 416 MEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD 475

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A +L  +M       +  N  T+N +ING CK G +E A      M +AG+  +V T
Sbjct: 476 VCAANELLHEM---CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y T+I    +    + A  L  EM+ +G+ P  V YN  ++     G VEG   +L  M+
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K+I P+  TY+ L K  C    +K   +++  +L + +V +  +YNILI   CK+ N+ 
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A    S MI +G      +Y  LI    K      A +++E M+K        +YN  I
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI 534
           +    + +L++  +L      + L+ +I
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLVKSI 740



 Score = 46.6 bits (109), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 59/135 (43%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T   ++ L+      G  EG   +++ +  K    +   +N+ +        +    +
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +YK M+S   V N NT+N++I   CK   ++EAL  +  M++ G       +N +I    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 263 QVGDLEFALKLFRKM 277
           +      A +LF KM
Sbjct: 682 KKKKFTEARRLFEKM 696



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           N       + EA  +F E+       N   YNIL+  LC  G  + A +L   M      
Sbjct: 230 NAVLCRLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASP 282

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           PD VTY  +V  +      E  I+L  +M   G+  +   Y ++I+ L  E    D V
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/518 (30%), Positives = 255/518 (49%), Gaps = 32/518 (6%)

Query: 144 ATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            +P VF    +++A       + A  +++ +   G   +   +   +  L + N++    
Sbjct: 214 VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEAL 273

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL +EM   G + +V TFN VI+ LCK  K+ +A  L  RML  G +P+ + +  +++  
Sbjct: 274 KLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333

Query: 262 CQVGDLEFALKLFRKMG--------------VMSGD---------------SVLPNSVTH 292
           C++G L  A K+  K+               VMSG                   P+  T+
Sbjct: 334 CRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTY 393

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++G CK G + FA ++   M + G + NV TYA L++G  + G  EEA  +  EM  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RGL  N+V+YN  I  L  +  V  AL +LS+M  K   PD FTY+ L  GLC+   + +
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF+L + +L +  V +  +YN LI+ L +      A  L++ M+ RG   D ITY  LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
            +CK GNIE  +++YE M       + +  N +INGLCK   +D A   L+ +   G + 
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D +TYN+++NG    G+I EA  +F  ++  G+  +   YN  I++ CK G    A    
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFF 693

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
              I +G +P  +T+  LV    K  + E    + D++
Sbjct: 694 YRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 264/525 (50%), Gaps = 13/525 (2%)

Query: 127 SPLEFLEGLLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
            P + +  LLD  +  +C+ T   +D ++         + A +V   +  KG S ++  +
Sbjct: 162 QPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTF 221

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
              +  L   NE+     L ++M   G V N   +  +I+AL ++ ++ EAL L   M  
Sbjct: 222 GIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFV 281

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G  P+V  FN +I+  C+V  +  A KL  +M ++ G    P+++T+  +++G C++G+
Sbjct: 282 MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRM-LLRG--FYPDNMTYGFLLHGLCRIGK 338

Query: 305 VEFAEEIRYAMIKAGIDC-NVRTYATLIDGYARGGSSEEALRLCDE-MVKRGLMPNNVVY 362
           +    E R  +IK  I C N     TLI+GY   G  +EA    +E M+  G  P+   Y
Sbjct: 339 LN---EARKILIK--IPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTY 393

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  +H L  EG +  A  ++++M  +   P+  TY+IL  GLC+ G +++A  + +++  
Sbjct: 394 NILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSA 453

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +  ++  YN LI  LC+   +  A  LLS M  +G  PD+ TY +LI G CK   I+ 
Sbjct: 454 RGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDE 513

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLIN 541
           A +++ NM       N V YN++I+ L +  +   A +L+      G  LD ITYN LI 
Sbjct: 514 AFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIK 573

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            +   G I +   ++ +M   G+  + +  NI+IN LCK G    A E ++  I  G +P
Sbjct: 574 AFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVP 633

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           D VTY +++    K    +E + L D + + GV PD  TYN  IS
Sbjct: 634 DIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFIS 678



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 246/508 (48%), Gaps = 15/508 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKL----KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            FD       ++GA  G + +I KL    K +G       +   + H  K  + G+  +L
Sbjct: 111 TFDVYYVFINKLGAI-GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRL 169

Query: 204 YKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
             +M +    E    +++LV+  L      + A +++Y ML  G+ P V  F +++   C
Sbjct: 170 LLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALC 229

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
              +++ A  L R M   +    +PNS+ +  +I+   +  +V  A ++   M   G   
Sbjct: 230 MFNEVDSACSLLRDM---TKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMP 286

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V+T+  +I G  +     +A +L D M+ RG  P+N+ Y   +H L   G +  A    
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEA---- 342

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCK 441
             ++ K  CP++   + L  G   +G +K+A    N+ +       D ++YNIL++ LCK
Sbjct: 343 RKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
             +L+ A+ L++ M  RG  P++ITY  L++G CK G +E A  V   M       N VI
Sbjct: 403 EGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVI 462

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +I  LC+   +  A +LL      G   D  TYN+LI G     +I EAF +F  M 
Sbjct: 463 YNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G   N V YN LI+ L + G +Q+A  L+  M+  G   D +TY  L+  F K  + E
Sbjct: 523 LDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIE 582

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + +EL++ M++ G+  D  + N +I+ L
Sbjct: 583 KGLELYEQMIMDGLGADTISCNIMINGL 610



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 203/449 (45%), Gaps = 24/449 (5%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY    + + + I  L    K +    L  +M + GI      F +I+    + G    A
Sbjct: 107 GYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQA 166

Query: 271 LKLFRKMGVM--------SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++L   M  +        S D VL   VT NC           + A  + Y M+  G+  
Sbjct: 167 IRLLLDMRAVYLCEPTFKSYDLVLEILVTGNC----------PQVATNVFYDMLSKGVSP 216

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V T+  ++         + A  L  +M K G +PN++VY + IH L  +  V  AL +L
Sbjct: 217 TVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLL 276

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M      PD  T++ +  GLC+   +  A KL +++L      D  +Y  L++ LC+ 
Sbjct: 277 EEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRI 336

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ-VYENMKKVEKKPNLVI 501
             L  A+++L    ++   P+     TLI+GY   G ++ A   + E M     +P++  
Sbjct: 337 GKLNEARKIL----IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFT 392

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +++GLCK+ SL  A+ L+    R G   + ITY  L+NG    G + EA  +  EM 
Sbjct: 393 YNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMS 452

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+ +N V YN LI  LC+      A  L+  M   G  PD  TY +L+    K    +
Sbjct: 453 ARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRID 512

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           E   L  +M+L G   +N TYN +I  LL
Sbjct: 513 EAFRLFHNMLLDGAVANNVTYNTLIHALL 541



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           VY   I+ L A G  +    +L  M ++ I      + I+ K   + G   QA +L   +
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 421 LEEHMVGDAY-SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
              ++    + SY++++  L   N    A  +   M+ +G+ P + T+G ++   C    
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A  +  +M K    PN ++Y ++I+ L +   +  A  LL+    +G + D  T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I+G     KI +A  +   M   G   + + Y  L++ LC+ G   +AR+++    +  
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKI 349

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIE-LHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
             P+     TL+  +  +   +E    L++ M+  G  PD  TYN ++  L  E S
Sbjct: 350 PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 107/216 (49%), Gaps = 21/216 (9%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLM----SANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
           ++++ L    R D+A  L  N++     AN+V+    +  LL      KA   V D L R
Sbjct: 500 SLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFR 559

Query: 155 ACT--------------QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
            CT              ++G  E   ++ +++ + G      + N  ++ L K+ ++   
Sbjct: 560 GCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNA 619

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++  ++ ++ G+V ++ T+N V+  LCK  +++EAL+L+ R+   G+ P+   +N  I+ 
Sbjct: 620 FEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISW 679

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            C+ G +  A   F + G+ +G   +P+++T N ++
Sbjct: 680 QCKEGMVNDACLFFYR-GIENG--FVPSNLTWNVLV 712


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 263/523 (50%), Gaps = 23/523 (4%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F+E  + +Y+   + P  FD L+           +  ++ +L+  G S S  + N  L  
Sbjct: 183 FVEQFISTYKAFSSDPVSFDLLLLCLP-------SAPLLLRLRQYGISPSPESCNAVLCR 235

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L  L+E  + ++   E  +C Y       N+++ ALC   ++++A  L+  M      P+
Sbjct: 236 L-PLDEAVQLFQELPEKNTCSY-------NILLKALCTAGRIKDAHQLFDEMASP---PD 284

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV + ++++  C + +LE A+KL  +M     +    N V +  +I   C  G+V  A  
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL---NPVAYTSVIALLCDEGQVSDAVR 341

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+  G+  +   + T++ G+ R G    A    DEM KRGL  + V Y + I+ L 
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+++ A  VL +M DK +  D  TY++L  G C+ G + +AF +HN+++++ +  +  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  L + LCK  ++ AA +LL  M  +GL  +I TY +LI+G CK GN+E A++   +M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
            +   KP++  Y +II  LC+   LD A SLLQ     G+   I TYN L+NG+ ++G++
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
                +   M    I  N   YN L+   C     +   E+ K M+   ++P+  TY  L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    K  + +E +  H +M+  G      +YNA+I  LL +K
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR-LLNKK 683



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 206/417 (49%), Gaps = 15/417 (3%)

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L  R+ + GI P+    N ++   C++  L+ A++LF+++          N+ ++N ++ 
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRL-PLDEAVQLFQELPEK-------NTCSYNILLK 261

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             C  GR++ A ++   M       +V TY  ++ GY      E A++L  EM  RGL  
Sbjct: 262 ALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V Y S I  L  EG V  A+ V+ DM+   +  D   ++ +  G CR G +  A    
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++ +  +  D  +Y  LIN LC++  L  A+++L  M  +GL  D +TY  LIDGYCK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G +  A  V+  M +    PN+V Y ++ +GLCK   + AA  LL      GL L+  TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N+LING    G + +A     +M   G+  +   Y  +I  LC+     +A  L++ M+ 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
            GI P  VTY  L+  F  +   E    L + M+   + P+  TYN+++     EK+
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 203/422 (48%), Gaps = 8/422 (1%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P  + +++      G    A  V++ + + G  +    +   +S   +  ++      + 
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM   G   +  T+  +I  LC+  +L+EA  +   M   G+  + V + ++I+  C+VG
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +  A  +  KM       V PN VT+  + +G CK G V  A E+ + M   G++ N+ 
Sbjct: 440 KMTEAFLVHNKM---VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY +LI+G  + G+ E+A+R   +M + GL P+   Y + I  L    +++ A  +L +M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +DK I P   TY++L  G C +G V+   +L   +LE+++  +  +YN L+   C   N+
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI--YN 503
            +  ++   M+ + ++P+  TY  LI G+CK  N++ A+  +  M  +EK   L    YN
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM--IEKGFRLTASSYN 674

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  L K      A+ L +  ++  L  +   YN  I+  F    +    A+  E+  V
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEV 734

Query: 563 GI 564
            +
Sbjct: 735 TL 736



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 185/388 (47%), Gaps = 3/388 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           AVF  ++    + G    A +   +++ +G +     +   ++ L +  E+    ++ +E
Sbjct: 356 AVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQE 415

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   +  T+ ++I   CK  K+ EA  ++ +M++  + PNVV +  + +  C+ GD
Sbjct: 416 MEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD 475

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A +L  +M       +  N  T+N +ING CK G +E A      M +AG+  +V T
Sbjct: 476 VCAANELLHEM---CSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT 532

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y T+I    +    + A  L  EM+ +G+ P  V YN  ++     G VEG   +L  M+
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K+I P+  TY+ L K  C    +K   +++  +L + +V +  +YNILI   CK+ N+ 
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A    S MI +G      +Y  LI    K      A +++E M+K        +YN  I
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI 534
           +    + +L++  +L      + L+ +I
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLVKSI 740



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 59/135 (43%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T   ++ L+      G  EG   +++ +  K    +   +N+ +        +    +
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +YK M+S   V N NT+N++I   CK   ++EAL  +  M++ G       +N +I    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 263 QVGDLEFALKLFRKM 277
           +      A +LF KM
Sbjct: 682 KKKKFTEARRLFEKM 696



 Score = 42.4 bits (98), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           N       + EA  +F E+       N   YNIL+  LC  G  + A +L   M      
Sbjct: 230 NAVLCRLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASP 282

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           PD VTY  +V  +      E  I+L  +M   G+  +   Y ++I+ L  E    D V
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/548 (28%), Positives = 259/548 (47%), Gaps = 51/548 (9%)

Query: 149 FDALVR---ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           F+ L++   +C+++      +  I KL   G    +  +   L  L   + +     L+ 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKL---GLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +M       NV TF  ++  LC+E ++ EA++L  RM++ G+ P  + +  I++  C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 266 DLEFALKLFRKM---------------------------------GVMSGDSVLPNSVTH 292
           D   AL L RKM                                   M    + P+  T+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I GFC  GR   AE++   M++  I  +V TY  LI+ + + G   EA  L DEM+ 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG++PN + Y+S I     +  ++ A  +   M  K   P+  T++ L  G C    +  
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
             +L +++ E  +V D  +YN LI+      +L AA  LL  MI  GL PDI+T  TL+D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 473 GYCKGGNIEGAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSL 521
           G C  G ++ A+++++ M+K +K           +P++  YN +I+GL  +     A+ L
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +     G++ D ITY+++I+G     ++ EA  MF  M +   + N V +  LIN  CK
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G      EL   M   GI+ + +TY TL+  F K  +    +++  +M+ SGV PD  T
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653

Query: 641 YNAIISPL 648
              +++ L
Sbjct: 654 IRNMLTGL 661



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/536 (27%), Positives = 268/536 (50%), Gaps = 24/536 (4%)

Query: 132 LEGLLDSYEI------CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           ++GL D+ ++       +  P+V D   L+    ++   +    + QK++ K     I++
Sbjct: 57  IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +      +++      + ++   G   +V TF  +++ LC E ++ EAL+L+++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++   PNVV F  ++N  C+ G +  A+ L  +   M  D + P  +T+  I++G CK G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR---MMEDGLQPTQITYGTIVDGMCKKG 233

Query: 304 RVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
               A  +   M +   I  NV  Y+ +ID   + G   +A  L  EM ++G+ P+   Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS I    + G    A  +L +M+++ I PD  TY+ L     + G   +A +L++++L 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +  +Y+ +I+  CK N L AA+ +   M  +G  P++IT+ TLIDGYC    I+ 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
            +++   M +     +   YN++I+G      L+AA  LLQ     GL  D +T +TL++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 542 GYFINGKIAEAFAMFSEMRNV-----------GIAVNKVGYNILINFLCKFGCYQQAREL 590
           G   NGK+ +A  MF  M+             G+  +   YNILI+ L   G + +A EL
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + M   GI+PD +TY++++    K    +E  ++ D M     SP+  T+  +I+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 184/385 (47%), Gaps = 5/385 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  LE A+ LF  M        LP+ V    ++    ++ R +    +   M +  I C
Sbjct: 56  EIKGLEDAIDLFSDM---LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ ++  LI  +        AL    ++ K GL P+ V + + +H L  E  V  AL + 
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +    P+  T++ L  GLCR G + +A  L ++++E+ +     +Y  +++ +CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 443 NNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +A  LL  M  V  +IP+++ Y  +ID  CK G    A  ++  M++    P+L  
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS+I G C       A+ LLQ   +R    D +TYN LIN +   GK  EA  ++ EM 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N + Y+ +I+  CK      A  +  +M   G  P+ +T+ TL+  +      +
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + +EL  +M  +G+  D  TYN +I
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLI 437



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 181/362 (50%), Gaps = 2/362 (0%)

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +GF ++  +E A ++   M+++    +V  +  L+    R    +  + L  +M ++ + 
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            +   +N  I    +   +  AL     +    + PD  T++ L  GLC    V +A  L
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNL 171

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +Q+ E     +  ++  L+N LC+   +  A  LL  M+  GL P  ITYGT++DG CK
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 477 GGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
            G+   A+ +   M++V    PN+VIY++II+ LCKD     A++L    Q  G+  D  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN++I G+  +G+ ++A  +  EM    I+ + V YN LIN   K G + +A EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  GIIP+ +TY++++  F K    +    +   M   G SP+  T+N +I    G K  
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 655 ED 656
           +D
Sbjct: 412 DD 413



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++++      G    A  ++Q++  +  S  +  +N  ++  VK  +     +LY EM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G + N  T++ +I   CK+ +L+ A  ++Y M   G  PN++ FN +I+  C    +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  ++L  +M   +   ++ ++ T+N +I+GF  +G +  A ++   MI +G+  ++ T 
Sbjct: 412 DDGMELLHEM---TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVE 376
            TL+DG    G  ++AL +   M K            G+ P+   YN  I  L  EG   
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +  +M  + I PD  TYS +  GLC+   + +A ++ + +  +    +  ++  LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N  CK+  +    +L   M  RG++ + ITY TLI G+ K GNI GA+ +++ M      
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           P+ +   +++ GL     L  A ++L+  Q
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 257/536 (47%), Gaps = 40/536 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + A+++A  + G  + A+ ++ +L+  G   ++  +N  +  L K   +   ++L   M
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V      ++ TF ++I  L +  +  E  ++   M   GI PN V +N +I   C+ G  
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             ALKLF +M V  G  +    VT+N I    CK G +E AE+I   M+ AG+  +   +
Sbjct: 333 SEALKLFDEM-VSKG--IKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLF 389

Query: 328 ATLIDGYARG-GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
            +++  + RG G  +  LRL  EM+ R L PN+ +  + I  L   G  E A  +   ++
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K +  +  T + L  GLC+   +K+A K+   ++   +  D  +YNI+I   CK++ + 
Sbjct: 450 GKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMD 509

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A QL   MI RG  PD+ T+   +  YC  G +E  + + + MK    KP++V Y +II
Sbjct: 510 EAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTII 569

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G CK   +  A   L    + GL  +A+ YN LI GY  NG I++A  +   M+  GI 
Sbjct: 570 DGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQ 629

Query: 566 VNKV-----------------------------------GYNILINFLCKFGCYQQAREL 590
              V                                   GY I+I   CK G   +A   
Sbjct: 630 PTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMY 689

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            K M   GI P+ +TYTTL+  +SK+ + EE  +L D+MV  G+ PD+ +YN +IS
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLIS 745



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 241/480 (50%), Gaps = 5/480 (1%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           V+Q+++  G + +   +N  +    +        KL+ EMVS G  + V T+NL+  ALC
Sbjct: 303 VLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALC 362

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ-VGDLEFALKLFRKMGVMSGDSVL 286
           KE ++E A  +   ML +G+  +   FN ++    +  G L+  L+L R+M       + 
Sbjct: 363 KEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREM---LARFLK 419

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN       I   CK G+ E A EI + ++  G+  NV T   LI G  +G + +EA ++
Sbjct: 420 PNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKV 479

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              MV  G+  + + YN  I        ++ A+ +  DMI +   PD FT++I     C 
Sbjct: 480 LKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCN 539

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V++   L +Q+  E +  D  +Y  +I+  CK+ ++  A + L+ ++  GL P+ + 
Sbjct: 540 LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVI 599

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QAS 525
           Y  LI GY + GNI  A+ + + MK    +P  V YNS++  +C    ++  K++  Q  
Sbjct: 600 YNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCI 659

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            +   L  I Y  +I G+   GKI EA   F EM + GI  NK+ Y  L+    K G  +
Sbjct: 660 VKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKE 719

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A +L   M+  GI+PD V+Y TL++ F +  S ++++E   +M    +  D  +YNA +
Sbjct: 720 EASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 226/487 (46%), Gaps = 41/487 (8%)

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFN 255
           + R    + E+ + G   ++ T ++++ AL    +L+ A  ++  M     + P+V  + 
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYT 215

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I   C+ G+++ A   F  +  +    + P  VT+N +++  CK GRVE A  ++  M
Sbjct: 216 AMIKALCRAGEIDAA---FAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++  +  ++ T+  LI G ARG    E   +  EM   G+ PN V+YN  I W   +G  
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK---------------LHNQV 420
             AL +  +M+ K I     TY+++ K LC+ G ++ A K               L N V
Sbjct: 333 SEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSV 392

Query: 421 LEEHMVGDAYSYNIL---------------------INYLCKSNNLAAAKQLLSSMIVRG 459
           +  H+ G      +L                     I  LCKS     A ++   ++ +G
Sbjct: 393 VAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L  ++ T   LI G C+G N++ A +V + M     + + + YN +I G CK + +D A 
Sbjct: 453 LGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L     + G   D  T+N  ++ Y   GK+ E   +  +M++ G+  + V Y  +I+  
Sbjct: 513 QLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY 572

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK     +A E +  ++ +G+ P+ V Y  L+  + +N +  + I + D M  +G+ P  
Sbjct: 573 CKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTP 632

Query: 639 QTYNAII 645
            TYN+++
Sbjct: 633 VTYNSLM 639



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 183/364 (50%), Gaps = 7/364 (1%)

Query: 150 DALVRACTQ----IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           DAL+ AC Q     G  E A ++  ++  KG  V++   N  +  L + N +    K+ K
Sbjct: 422 DALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLK 481

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            MV+ G   +  T+N++I   CK  K++EA+ L   M+K G  P++  FN+ ++  C +G
Sbjct: 482 AMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLG 541

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +E  L L  +M     + + P+ VT+  II+G+CK   +  A E    ++K G+  N  
Sbjct: 542 KVEEILHLLDQM---KSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAV 598

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  LI GY R G+  +A+ + D M   G+ P  V YNS ++W+   G VE    V +  
Sbjct: 599 IYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC 658

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K I      Y+I+ +G C+ G + +A     ++    +  +  +Y  L+    KS N 
Sbjct: 659 IVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNK 718

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L   M+  G++PD ++Y TLI G+C+  +++  V+    M     K +   YN+ 
Sbjct: 719 EEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAF 778

Query: 506 INGL 509
           ++G+
Sbjct: 779 VDGI 782



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 204/437 (46%), Gaps = 40/437 (9%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS-HLVKLNEIGRFW 201
           K T   ++ + +A  + G  E A  ++ ++ + G  V    +N+ ++ HL     +    
Sbjct: 348 KQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVL 407

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L +EM++     N       I  LCK  K EEA  +++++L  G+  NV   N +I+  
Sbjct: 408 RLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGL 467

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ  +++ A K+ + M V SG  V  + +T+N +I G CK  +++ A ++R  MIK G  
Sbjct: 468 CQGNNMKEATKVLKAM-VNSG--VELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFK 524

Query: 322 -------------CN----------------------VRTYATLIDGYARGGSSEEALRL 346
                        CN                      + TY T+IDGY +     +A   
Sbjct: 525 PDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEY 584

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             E++K GL PN V+YN+ I      G++  A+ +L  M    I P   TY+ L   +C 
Sbjct: 585 LTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCH 644

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V++   +  Q + + +      Y I+I   CK   +  A      M  RG+ P+ +T
Sbjct: 645 AGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMT 704

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA-AKSLLQAS 525
           Y TL+  Y K GN E A ++++ M  +   P+ V YN++I+G C+  SLD   +S  + S
Sbjct: 705 YTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMS 764

Query: 526 QRIGLLDAITYNTLING 542
            ++   D  +YN  ++G
Sbjct: 765 SQVLKQDGCSYNAFVDG 781



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 2/215 (0%)

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVI 501
            +L+ A      +  RG  P I T   L++    GG ++ A +V+  M+  +   P++  
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y ++I  LC+   +DAA ++L   +R G+   + TYN L++    +G++ EAF +   M 
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
              +  + V + ILI+ L +   + +   +++ M   GI P+ V Y  ++    +     
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           E ++L D+MV  G+     TYN I   L  E   E
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEME 368



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 5/168 (2%)

Query: 134 GLLDS--YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           G+LD+  Y   + TP  +++L+      G  E    V  +  VK   + +  +   +   
Sbjct: 618 GILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGF 677

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K+ +I      +KEM S G   N  T+  +++A  K    EEA  L+  M+  GI P+ 
Sbjct: 678 CKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDS 737

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
           V +N +I+  C+V  L+   K+      MS   +  +  ++N  ++G 
Sbjct: 738 VSYNTLISGFCEVDSLD---KMVESPAEMSSQVLKQDGCSYNAFVDGI 782


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 275/556 (49%), Gaps = 23/556 (4%)

Query: 93  SLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDAL 152
           S++S  AI+++LV +R FD A  +    M    + P        D Y         F   
Sbjct: 110 SVQSYNAIMNILVEYRYFDQAHKVYMR-MRDKGIVP--------DVY--------TFTIR 152

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           +++  +      A  ++  +  +G   S  A+   +    + N      +L++EM+  G 
Sbjct: 153 MKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGI 212

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             ++  FN +I+ LC++  ++E+  L  ++LK G+ PN+   N+ I   CQ   L  A++
Sbjct: 213 CPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIR 272

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           L    GV  G  + P+ +T+N +I G CK  +V  AE     M+  G + +  TY ++ID
Sbjct: 273 LLD--GV--GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIID 328

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GY + G  + A ++  +   +G +P+   Y S I+ L  +GD++ A+ V ++ ++K + P
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +    + L KGL + G + QA KL N++ E     D ++YN++IN LCK   ++ A  L+
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLV 448

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
              I +G +PD+ T+ TLIDGYCK   ++ A+++ + M      P+++ YNSI+NGLCK 
Sbjct: 449 IDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKA 508

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
              +      +     G + + ITYN L   +    K+ EA  +  EM+N G+  + V +
Sbjct: 509 GKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568

Query: 572 NILINFLCKFGCYQQARELMK-VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
             L+   C  G    A +L K V   +       TY  ++  F+   +     +L + M 
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628

Query: 631 LSGVSPDNQTYNAIIS 646
            +G SPD+ TY  +I 
Sbjct: 629 ENGFSPDSYTYRVMID 644



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 218/430 (50%), Gaps = 5/430 (1%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ K++EA+ ++ RM      P+V  +N I+N   +    + A K++ +M       ++P
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM---RDKGIVP 144

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T    +  FC+  R   A  +   M   G + +   Y T+I G+       EA  L 
Sbjct: 145 DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELF 204

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EM+  G+ P+ + +N  IH L  +G V+ +  +L+ ++ + + P+ FT +I  +G C+ 
Sbjct: 205 EEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQR 264

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             + +A +L + V    +  D  +YN LI  LCK+  +  A+  L  M+  G  PD  TY
Sbjct: 265 AMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTY 323

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            ++IDGYCK G ++ A Q+  +       P+   Y S+INGLC+D  +D A ++   +  
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  + +  NTL+ G    G I +A  + +EM   G + +   YN++IN LCK GC   
Sbjct: 384 KGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSD 443

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  L+   I  G +PD  T+ TL+  + K    +  IE+ D M   GVSPD  TYN+I++
Sbjct: 444 ADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILN 503

Query: 647 PLLGEKSAED 656
            L      ED
Sbjct: 504 GLCKAGKYED 513



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 246/541 (45%), Gaps = 50/541 (9%)

Query: 124 NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           + V   E  E +L    IC    A F+ L+    + G  + +  ++ K+  +G S ++  
Sbjct: 196 HRVEAHELFEEML-GLGICPDIMA-FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFT 253

Query: 184 WNNFLSHLVK---LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
            N F+    +   LNE  R      + V  G   +V T+N +I  LCK  K+ EA     
Sbjct: 254 VNIFIQGFCQRAMLNEAIRLL----DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLR 309

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           +M+  G  P+   +N II+  C++G ++ A ++ R  G   G   +P+  T+  +ING C
Sbjct: 310 KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRD-GAFKG--FVPDESTYCSLINGLC 366

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           + G ++ A  +    ++ G+  N+    TL+ G ++ G   +AL+L +EM + G  P+  
Sbjct: 367 QDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIW 426

Query: 361 VYNSTIHWLFAEGDVEGA---------------LFVLSDMIDKH---------------- 389
            YN  I+ L   G V  A               +F  + +ID +                
Sbjct: 427 TYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRM 486

Query: 390 ----ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD  TY+ +  GLC+ G  +        ++E+  V +  +YNIL    CK+  +
Sbjct: 487 WNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKV 546

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNS 504
             A  L+  M  +GL PD++ +GTL+ G+C  G+++GA Q+++ + +  K    +  YN 
Sbjct: 547 EEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNI 606

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN      +++ A+ L       G   D+ TY  +I+G+   G I   ++        G
Sbjct: 607 MINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKG 666

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  +   +  ++N LC      +A  ++ +M+  GI+P+ V  T       +  +P+ V+
Sbjct: 667 LIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN-TIFEADKKEVAAPKIVV 725

Query: 624 E 624
           E
Sbjct: 726 E 726



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 189/398 (47%), Gaps = 10/398 (2%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + + +L+    Q G  + A +V  +   KG   ++   N  +  L +   I +  KL  E
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   ++ T+NLVI  LCK   + +A +L    +  G  P+V  FN +I+  C+   
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A+++  +M       V P+ +T+N I+NG CK G+ E        M++ G   N+ T
Sbjct: 476 LDNAIEIVDRM---WNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIIT 532

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L + + +    EEAL L +EM  +GL P+ V + + +      GD++GA + L   +
Sbjct: 533 YNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGA-YQLFKRV 591

Query: 387 DKHICPDHF--TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           D+     H   TY+I+         +  A KL N++ E     D+Y+Y ++I+  CK+ N
Sbjct: 592 DEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGN 651

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           + +    L   I +GLIP + T+G +++  C    +  AV +   M      P +V  N+
Sbjct: 652 INSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV--NT 709

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           I     K+ +  A K +++   + G +    Y  L +G
Sbjct: 710 IFEADKKEVA--APKIVVENLMKKGHITYFAYEILHDG 745



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 171/381 (44%), Gaps = 5/381 (1%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV--RTY 327
           AL++F    V   D      +T+  +I      G  E  EE+  A  +  ID  +    Y
Sbjct: 23  ALEIFNS--VKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEV-LAETRMNIDNGLLEGVY 79

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
              +  Y R G  +EA+ + + M      P+   YN+ ++ L      + A  V   M D
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD +T++I  K  CR      A +L N +  +     A +Y  +I    + N+   
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L   M+  G+ PDI+ +  LI   C+ G+++ + ++   + K    PNL   N  I 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           G C+ A L+ A  LL    R    D ITYNTLI G   N K+ EA     +M N G   +
Sbjct: 260 GFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPD 319

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              YN +I+  CK G  Q A ++++     G +PD  TY +L+    ++   +  I + +
Sbjct: 320 GFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFN 379

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           + +  G+ P+    N ++  L
Sbjct: 380 EAMEKGLKPNLVLCNTLVKGL 400


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 263/523 (50%), Gaps = 23/523 (4%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F+E  + +Y+   + P  FD L+           +  ++ +L+  G S S  + N  L  
Sbjct: 183 FVEQFISTYKAFSSDPVSFDLLLLCLP-------SAPLLLRLRQYGISPSPESCNAVLCR 235

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L  L+E  + ++   E  +C Y       N+++ ALC   ++++A  L+  M      P+
Sbjct: 236 L-PLDEAVQLFQELPEKNTCSY-------NILLKALCTAGRIKDAHQLFDEMASP---PD 284

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV + ++++  C + +LE A+KL  +M     +    N V +  +I   C  G+V  A  
Sbjct: 285 VVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL---NPVAYTSVIALLCDEGQVSDAVR 341

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+  G+  +   + T++ G+ R G    A    DEM KRGL  + V Y + I+ L 
Sbjct: 342 VVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLC 401

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+++ A  VL +M DK +  D  TY++L  G C+ G + +AF +HN+++++ +  +  
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  L + LCK  ++ AA +LL  M  +GL  +I TY +LI+G CK GN+E A++   +M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
            +   KP++  Y +II  LC+   LD A SLLQ     G+   I TYN L+NG+ ++G++
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
                +   M    I  N   YN L+   C     +   E+ K M+   ++P+  TY  L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    K  + +E +  H +M+  G      +YNA+I  LL +K
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR-LLNKK 683



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 206/417 (49%), Gaps = 15/417 (3%)

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L  R+ + GI P+    N ++   C++  L+ A++LF+++          N+ ++N ++ 
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRL-PLDEAVQLFQELPEK-------NTCSYNILLK 261

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             C  GR++ A ++   M       +V TY  ++ GY      E A++L  EM  RGL  
Sbjct: 262 ALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V Y S I  L  EG V  A+ V+ DM+   +  D   ++ +  G CR G +  A    
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++ +  +  D  +Y  LIN LC++  L  A+++L  M  +GL  D +TY  LIDGYCK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G +  A  V+  M +    PN+V Y ++ +GLCK   + AA  LL      GL L+  TY
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTY 498

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N+LING    G + +A     +M   G+  +   Y  +I  LC+     +A  L++ M+ 
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
            GI P  VTY  L+  F  +   E    L + M+   + P+  TYN+++     EK+
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 203/422 (48%), Gaps = 8/422 (1%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P  + +++      G    A  V++ + + G  +    +   +S   +  ++      + 
Sbjct: 320 PVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFD 379

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM   G   +  T+  +I  LC+  +L+EA  +   M   G+  + V + ++I+  C+VG
Sbjct: 380 EMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVG 439

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +  A  +  KM       V PN VT+  + +G CK G V  A E+ + M   G++ N+ 
Sbjct: 440 KMTEAFLVHNKM---VQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIF 496

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY +LI+G  + G+ E+A+R   +M + GL P+   Y + I  L    +++ A  +L +M
Sbjct: 497 TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEM 556

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +DK I P   TY++L  G C +G V+   +L   +LE+++  +  +YN L+   C   N+
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI--YN 503
            +  ++   M+ + ++P+  TY  LI G+CK  N++ A+  +  M  +EK   L    YN
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM--IEKGFRLTASSYN 674

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  L K      A+ L +  ++  L  +   YN  I+  F    +    A+  E+  V
Sbjct: 675 ALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEV 734

Query: 563 GI 564
            +
Sbjct: 735 TL 736



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 59/135 (43%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T   ++ L+      G  EG   +++ +  K    +   +N+ +        +    +
Sbjct: 562 KPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTE 621

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +YK M+S   V N NT+N++I   CK   ++EAL  +  M++ G       +N +I    
Sbjct: 622 IYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLN 681

Query: 263 QVGDLEFALKLFRKM 277
           +      A +LF KM
Sbjct: 682 KKKKFTEARRLFEKM 696



 Score = 42.0 bits (97), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           N       + EA  +F E+       N   YNIL+  LC  G  + A +L   M      
Sbjct: 230 NAVLCRLPLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASP 282

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           PD VTY  +V  +      E  I+L  +M   G+  +   Y ++I+ L  E    D V
Sbjct: 283 PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAV 340


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 251/460 (54%), Gaps = 10/460 (2%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK--ECKLEEALSLYYRMLKSGIWPNVV 252
           N++  F ++ +   +   VE    FN ++ ++ K        A+SL +++   GI P +V
Sbjct: 40  NDVSSFHRMLRMRPTPSIVE----FNKILGSIVKANNNHYTTAISLSHQLELKGITPTIV 95

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            FN+++N  C +G++ FA  +F K+  +      P ++T N +ING C  G+++ A    
Sbjct: 96  TFNILVNCYCHLGEMTFAFSIFAKILKLGYH---PTTITFNTLINGICLNGKLKEALHFH 152

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             +I  G   +  +Y TLI+G  + G +  AL++  ++  + +  + V+YN  I+ L  +
Sbjct: 153 DHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKD 212

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             V  A  + S+MI K I PD  T++ L  G C  G +K+AF L ++++ +++  D Y++
Sbjct: 213 KAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTF 272

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           +IL++ LCK  N+  AK +L+ M+ +G+IPD++TY +L+DGYC    +  A  V+  M +
Sbjct: 273 SILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSR 332

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
           +   P+   YN +INGL K   +D A SL +     G+  D +TYN+LI+G    G+I+ 
Sbjct: 333 LGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISY 392

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A+ +  EM N GI  + + YN LI+ LCK     +A  L+K +   GI P   TY  L+ 
Sbjct: 393 AWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILID 452

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
              K    +   ++  D+++ G S +  TYN +I+ L  E
Sbjct: 453 GLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKE 492



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 251/471 (53%), Gaps = 4/471 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  +  +L++KG + +I  +N  ++    L E+   + ++ +++  GY     TFN +I 
Sbjct: 78  AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLIN 137

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            +C   KL+EAL  +  ++  G   + V +  +IN  C++G+   AL++ +K+    G  
Sbjct: 138 GICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKI---EGKL 194

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V  + V +N IIN  CK   V  A ++   MI   I  +V T+ +LI G+   G  +EA 
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  EMV + + P+   ++  +  L  +G++  A  +L+ M+ + + PD  TYS L  G 
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY 314

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C    V +A  + + +    +   A+SYNI+IN L K   +  A  L   M  +G+ PD 
Sbjct: 315 CLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT 374

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY +LIDG CK G I  A Q+ + M       +++ YNS+I+ LCK+  +D A +L++ 
Sbjct: 375 VTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKK 434

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +  G+  ++ TYN LI+G    G++  A  +F ++   G +VN   YNI+IN LCK G 
Sbjct: 435 IKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL 494

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           + +A  L+  M  +GIIPD VTY T++    +    E+  +L  +M++ G+
Sbjct: 495 FNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 253/527 (48%), Gaps = 30/527 (5%)

Query: 51  LEQMAPSLTNSLVNRVVSEF------RKSPKLALEFYTWVGE-----NNRF------SHS 93
           L    P   +  VN  VS F      R +P + +EF   +G      NN +      SH 
Sbjct: 26  LHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSI-VEFNKILGSIVKANNNHYTTAISLSHQ 84

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV 153
           LE    I   +V +    +    +G +  A S+    F + L   Y     T   F+ L+
Sbjct: 85  LELK-GITPTIVTFNILVNCYCHLGEMTFAFSI----FAKILKLGYH---PTTITFNTLI 136

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                 G  + A      +   G  +   ++   ++ L K+ E     ++ K++      
Sbjct: 137 NGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVN 196

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V  +N++I +LCK+  + +A  LY  M+   I P+VV FN +I   C VG L+ A  L
Sbjct: 197 TDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGL 256

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F +M +    ++ P+  T + +++  CK G +  A+ +   M+K G+  +V TY++L+DG
Sbjct: 257 FHEMVL---KNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDG 313

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           Y       +A  +   M + G+ P+   YN  I+ L     V+ AL +  +M  K I PD
Sbjct: 314 YCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPD 373

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+ L  GLC+ G +  A++L +++    +  D  +YN LI+ LCK++++  A  L+ 
Sbjct: 374 TVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVK 433

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            +  +G+ P + TY  LIDG CKGG ++ A  V++++       N   YN +INGLCK+ 
Sbjct: 434 KIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEG 493

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
             + A+ LL   +  G++ DA+TY T+I   F   +  +A  +  EM
Sbjct: 494 LFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/549 (27%), Positives = 260/549 (47%), Gaps = 52/549 (9%)

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           +C+++      +  I KL   G   S+  ++  L  L   + +      + ++       
Sbjct: 123 SCSKLPFALSTFGKITKL---GFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----P 175

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV  F  ++  LC+E ++ EA++L  RM++ G+ PN + +  I++  C++GD   AL L 
Sbjct: 176 NVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235

Query: 275 RKM---------------------------------GVMSGDSVLPNSVTHNCIINGFCK 301
           RKM                                   M    + PN  T+NC+INGFC 
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A+ +   M +  +  +V T++ LI+   + G   EA  L +EM+ RG++PN + 
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YNS I     +  ++ A  +   M  K   PD  T+SIL  G C    V    KL +++ 
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS 415

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +V +  +Y  LI+  C+  NL AA  LL  MI  G+ P+++T  TL+DG C  G ++
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLK 475

Query: 482 GAVQVYENMKKV-----------EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
            A+++++ M+K            + +P++  YN +I GL  +     A+ L +     GL
Sbjct: 476 DALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D ITYN++I+G     ++ EA  MF  M + G + + V +  LIN  CK G      E
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLE 595

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +   M   GI+ + +TY TL+  F +  +    +++  +M+ SGV PD  T   +++ L 
Sbjct: 596 VFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 655

Query: 650 GEKSAEDQV 658
            ++  +  V
Sbjct: 656 SKEELKRAV 664



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 254/490 (51%), Gaps = 20/490 (4%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           +K++++    +I+++   +      +++      + ++   G+  ++ TF+ +++ LC E
Sbjct: 100 RKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVE 159

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            ++ EAL  ++++ K    PNV+ F  ++N  C+ G +  A+ L  +   M  D + PN 
Sbjct: 160 DRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDR---MVEDGLQPNQ 212

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCD 348
           +T+  I++G CK+G    A  +   M +   I  NV  Y+ +IDG  + G   +A  L  
Sbjct: 213 ITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFS 272

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM ++G+ PN   YN  I+   + G    A  +L +M ++ + PD  T+S+L   L + G
Sbjct: 273 EMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEG 332

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
              +A +L+N++L   ++ +  +YN +I+   K N L AA+++   M  +G  PD+IT+ 
Sbjct: 333 KFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFS 392

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            LIDGYC    ++  +++   M +     N + Y ++I+G C+  +L+AA  LLQ     
Sbjct: 393 ILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISS 452

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV-----------GYNILIN 576
           G+  + +T NTL++G   NGK+ +A  MF  M+   + ++              YNILI 
Sbjct: 453 GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILIC 512

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            L   G + +A EL + M   G++PD +TY +++    K    +E  ++ D M   G SP
Sbjct: 513 GLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSP 572

Query: 637 DNQTYNAIIS 646
           D  T+  +I+
Sbjct: 573 DVVTFTTLIN 582



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 231/448 (51%), Gaps = 22/448 (4%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N+ +F ++I   C   KL  ALS + ++ K G  P++V F+ +++  C    +  AL  F
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF 169

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            ++         PN +    ++NG C+ GRV  A  +   M++ G+  N  TY T++DG 
Sbjct: 170 HQI-------CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 335 ARGGSSEEALRLCDEM--VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
            + G +  AL L  +M  V R + PN V+Y++ I  L+ +G    A  + S+M +K I P
Sbjct: 223 CKMGDTVSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISP 281

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           + FTY+ +  G C +G   +A +L  ++ E  M  D  ++++LIN L K      A++L 
Sbjct: 282 NLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELY 341

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           + M+ RG+IP+ ITY ++IDG+ K   ++ A +++  M      P+++ ++ +I+G C  
Sbjct: 342 NEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGA 401

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +D    LL    R GL+ + ITY TLI+G+   G +  A  +  EM + G+  N V  
Sbjct: 402 KRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTC 461

Query: 572 NILINFLCKFGCYQQARELMKVM-----------ILHGIIPDYVTYTTLVTRFSKNCSPE 620
           N L++ LC  G  + A E+ KVM             + + PD  TY  L+          
Sbjct: 462 NTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFS 521

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           E  EL+++M   G+ PD  TYN++I  L
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGL 549



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 221/442 (50%), Gaps = 16/442 (3%)

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
            ++VS L  L  + +   I K    ++ A++    + G    A ++  +++ KG S ++ 
Sbjct: 226 GDTVSALNLLRKMEEVSRI-KPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLF 284

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  ++            +L +EM       +V TF+++I AL KE K  EA  LY  M
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEM 344

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           L  GI PN + +N +I+   +   L+ A ++F    +M+     P+ +T + +I+G+C  
Sbjct: 345 LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFY---LMATKGCSPDVITFSILIDGYCGA 401

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
            RV+   ++ + M + G+  N  TY TLI G+ + G+   AL L  EM+  G+ PN V  
Sbjct: 402 KRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTC 461

Query: 363 NSTIHWLFAEGDVEGALFVLS-------DMIDKH----ICPDHFTYSILTKGLCRNGCVK 411
           N+ +  L   G ++ AL +         D+   H    + PD  TY+IL  GL   G   
Sbjct: 462 NTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFS 521

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A +L+ ++    +V D  +YN +I+ LCK + L  A Q+  SM  +G  PD++T+ TLI
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLI 581

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           +GYCK G +   ++V+  M +     N + Y ++I+G C+  +++ A  + Q     G+ 
Sbjct: 582 NGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVY 641

Query: 532 -DAITYNTLINGYFINGKIAEA 552
            D IT   ++ G +   ++  A
Sbjct: 642 PDTITIRNMLTGLWSKEELKRA 663



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 221/526 (42%), Gaps = 101/526 (19%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F  SL +   ++H L    R  +AL     +   N ++    + GL     + +A  A+ 
Sbjct: 142 FHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAV-ALL 200

Query: 150 DALVRACTQ---------------IGATEGAYDVIQKLK-VKGHSVSIHAWNNFLSHLVK 193
           D +V    Q               +G T  A ++++K++ V     ++  ++  +  L K
Sbjct: 201 DRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWK 260

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
                    L+ EM   G   N+ T+N +I   C   +  EA  L   M +  + P+VV 
Sbjct: 261 DGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVT 320

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F+++IN   + G    A +L+ +M       ++PN++T+N +I+GF K  R++ AE + Y
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEM---LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFY 377

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M   G   +V T++ LIDGY      ++ ++L  EM +RGL+ N + Y + IH     G
Sbjct: 378 LMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLG 437

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK------------------ 415
           ++  AL +L +MI   +CP+  T + L  GLC NG +K A +                  
Sbjct: 438 NLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPF 497

Query: 416 ----------------------------LHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                                       L+ ++    +V D  +YN +I+ LCK + L  
Sbjct: 498 NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDE 557

Query: 448 AKQLLSSMIVRGLIPDI-----------------------------------ITYGTLID 472
           A Q+  SM  +G  PD+                                   ITY TLI 
Sbjct: 558 ATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIH 617

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+C+ GNI GA+ +++ M      P+ +   +++ GL     L  A
Sbjct: 618 GFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 175/356 (49%), Gaps = 16/356 (4%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K +P V  F  L+ A  + G    A ++  ++  +G   +   +N+ +    K N +   
Sbjct: 313 KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +++  M + G   +V TF+++I   C   ++++ + L + M + G+  N + +  +I+ 
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            CQ+G+L  AL L ++M + SG  V PN VT N +++G C  G+++ A E+   M K+ +
Sbjct: 433 FCQLGNLNAALDLLQEM-ISSG--VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489

Query: 321 DCN-----------VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           D +           V+TY  LI G    G   EA  L +EM  RGL+P+ + YNS I  L
Sbjct: 490 DLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGL 549

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +  ++ A  +   M  K   PD  T++ L  G C+ G V    ++  ++    +V +A
Sbjct: 550 CKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANA 609

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
            +Y  LI+  C+  N+  A  +   MI  G+ PD IT   ++ G      ++ AVQ
Sbjct: 610 ITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 33/263 (12%)

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI---- 471
           LH ++    +  + YS+ ILI   C  + L  A      +   G  P ++T+ TL+    
Sbjct: 98  LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157

Query: 472 ---------------------------DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
                                      +G C+ G +  AV + + M +   +PN + Y +
Sbjct: 158 VEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 217

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           I++G+CK     +A +LL+  + +  +  + + Y+ +I+G + +G+  +A  +FSEM+  
Sbjct: 218 IVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           GI+ N   YN +IN  C  G + +A+ L++ M    + PD VT++ L+    K     E 
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
            EL+++M+  G+ P+  TYN++I
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMI 360


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 247/509 (48%), Gaps = 33/509 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS + K+N+      L ++M + G   N  T++++I   C+  +L  AL++ 
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVL 139

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV-------------------- 279
            +M+K G  PN+V  + ++N  C    +  A+ L  +M V                    
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199

Query: 280 ------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                       M      P+ VT+  ++NG CK G  + A  +   M +  ++  V  Y
Sbjct: 200 NKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIY 259

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+IDG  +    ++AL L  EM  +G+ PN V Y+S I  L   G    A  +LSDMI+
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I PD FT+S L     + G + +A KL++++++  +     +Y+ LIN  C  + L  
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AKQ+   M+ +   PD+++Y TLI G+CK   ++  ++++  M +     N V Y ++I 
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL +    D A+ + +     G+   I TYNTL++G   NGK+ +A  +F  ++   +  
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               YNI+I  +CK G  +   +L   + L G+ PD V Y T+++ F +  S EE   L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +M   G  P++  YN +I   L +   E
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDRE 588



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 237/485 (48%), Gaps = 4/485 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+  +I   ++ L+       I     L  +M   GY  N  TFN +I+
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            L    K  EA++L  RM+  G  P++V + +++N  C+ GD + A  L  KM       
Sbjct: 195 GLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM---EQGK 251

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P  + +  II+G CK   ++ A  +   M   GI  NV TY++LI      G   +A 
Sbjct: 252 LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           RL  +M++R + P+   +++ I     EG +  A  +  +M+ + I P   TYS L  G 
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C +  + +A ++   ++ +H   D  SY+ LI   CK+  +    +L   M  RGL+ + 
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TLI G  + G+ + A ++++ M      PN++ YN++++GLCK+  L+ A  + + 
Sbjct: 432 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            QR  +   I TYN +I G    GK+ + + +F  +   G+  + V YN +I+  C+ G 
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A  L K M   G +P+   Y TL+    ++   E   EL  +M   G + D  T   
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611

Query: 644 IISPL 648
           + + L
Sbjct: 612 VTNML 616



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 226/455 (49%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EMV      ++  F+ ++ A+ K  K +  +SL  +M   G+  N   ++++IN  C
Sbjct: 68  LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFC 127

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  AL +  KM  +  +   PN VT + ++NG+C   R+  A  +   M   G   
Sbjct: 128 RRSQLPLALAVLGKMMKLGYE---PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  T+ TLI G      + EA+ L D MV +G  P+ V Y   ++ L   GD + A  +L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILL 244

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           + M    + P    Y+ +  GLC+N  +  A  L  ++  + +  +  +Y+ LI+ LC  
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + A +LLS MI R + PD+ T+  LID + K G +  A ++Y+ M K    P++V Y
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364

Query: 503 NSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +S+ING C    LD AK + +    +    D ++Y+TLI G+    ++ E   +F EM  
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQ 424

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N V Y  LI  L + G    A+E+ K M+  G+ P+ +TY TL+    KN   E+
Sbjct: 425 RGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + + + +  S + P   TYN +I  +      ED
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 211/412 (51%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G T+ A+ ++ K++       +  +   +  L K   +    
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDAL 276

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I P+V  F+ +I+  
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+ VT++ +INGFC   R++ A+++   M+     
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSID---PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V +Y+TLI G+ +    +E + L  EM +RGL+ N V Y + I  LF  GD + A  +
Sbjct: 394 PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEI 453

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + P+  TY+ L  GLC+NG +++A  +   +    M    Y+YNI+I  +CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  ++ ++G+ PD++ Y T+I G+C+ G+ E A  +++ MK+    PN   
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D   +A+  L++  +  G     +   L+     +G++ ++F
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 625



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 60/125 (48%)

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           I ++ L++      K     ++  +M+N+G+  N   Y+ILIN  C+      A  ++  
Sbjct: 82  IEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGK 141

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M+  G  P+ VT ++L+  +  +    E + L D M ++G  P+  T+N +I  L     
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201

Query: 654 AEDQV 658
           A + V
Sbjct: 202 ASEAV 206


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 174/614 (28%), Positives = 294/614 (47%), Gaps = 27/614 (4%)

Query: 50  ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGEN------NRFSHSLESSCAIVHL 103
           I  +++P   + L+ R        PKL L+F+ W          + F+    S CA  H 
Sbjct: 74  IPSRLSPDAVSCLICRRSHSLH--PKLLLDFFYWSRPRIAPPSADAFARLAASLCAASH- 130

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPL---EFLEGLLDS-----YEICKATPAVFDALVRA 155
                 F  A  L+  ++ A+   PL        + DS           + AV D LV  
Sbjct: 131 ------FPQANGLLHQMILAHPHPPLVLASIQRAIQDSDARSPSPSPSHSTAVLDVLVDT 184

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
             + G+   A  V+  +   G + +    N  L  L++ + +   WKL   M   G   +
Sbjct: 185 YKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPD 244

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T++  + A CK    + A  ++  M +     N V +N++I+  C+ G +E A   F+
Sbjct: 245 VYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG-FK 303

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +  V  G S  P++ T+  ++NG CK GR++ A+ +   M  +G+  NV  YATL+DG+ 
Sbjct: 304 EEMVDYGLS--PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFM 361

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G + EA  + +EM+  G+ PN ++Y++ I  L   G +  A  +L++MI     PD F
Sbjct: 362 KEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTF 421

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY  L +G  ++     AF+L N++    ++ +AY+Y I+IN LC++     A  LL  M
Sbjct: 422 TYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEM 481

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           I  GL P+   Y  LI G+ K G+I  A +  ENM K    P+L  YNS+I GL     +
Sbjct: 482 ISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRI 541

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           + A+      Q+ GL+ D  TY+ LI+GY     + +A  +  +M N G+  N   Y  L
Sbjct: 542 EEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDL 601

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           +    K   +++   +++ M+  G  PD   Y  ++   S++ + E    +  ++  +G+
Sbjct: 602 LEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGL 661

Query: 635 SPDNQTYNAIISPL 648
            PD   Y+++IS L
Sbjct: 662 VPDLHIYSSLISGL 675



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 251/506 (49%), Gaps = 4/506 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++    + GA E A+   +++   G S     +   ++ L K   +    
Sbjct: 276 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAK 335

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EM   G   NV  +  ++    KE K  EA  +   M+ +G+ PN + ++ +I   
Sbjct: 336 ALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGL 395

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++G L  A KL  +M +  G    P++ T++ ++ G  +    + A E+   M  +GI 
Sbjct: 396 CKIGQLGRASKLLNEM-IKVGHR--PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGIL 452

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY  +I+G  + G S+EA  L +EM+  GL PN  +Y   I     EG +  A   
Sbjct: 453 PNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACES 512

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M   ++ PD F Y+ L KGL   G +++A + + QV +  +V D ++Y+ LI+  CK
Sbjct: 513 LENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 572

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + NL  A QLL  M+  GL P+  TY  L++GY K  + E    + ++M     KP+  I
Sbjct: 573 TRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHI 632

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +I  L +  +++ A  +L   ++ GL+ D   Y++LI+G      + +A  +  EM 
Sbjct: 633 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+    V YN LI+  C+ G   +AR +   ++  G++P+ VTYT L+    KN    
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDIT 752

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIIS 646
           +  +L+ DM+  G++PD   YN + +
Sbjct: 753 DAFDLYKDMLDRGIAPDAFVYNVLAT 778



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 219/453 (48%), Gaps = 38/453 (8%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           +GA++++ +++  G   + + +   ++ L +  E      L +EM+S G   N   +  +
Sbjct: 437 DGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPL 496

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I    KE  +  A      M K+ + P++ C+N +I     VG +E A + + ++     
Sbjct: 497 IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV---QK 553

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             ++P+  T++ +I+G+CK   +E A+++   M+ +G+  N  TY  L++GY +    E+
Sbjct: 554 RGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEK 613

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
              +   M+  G  P+N +Y   I  L    ++E A  VL+++    + PD   YS L  
Sbjct: 614 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 673

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLC+   +++A  L +++ +E +      YN LI+  C+S +++ A+ +  S++ +GL+P
Sbjct: 674 GLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +TY  LIDG CK G+I  A  +Y++M      P+  +YN +  G C DA+        
Sbjct: 734 NCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG-CSDAA-------- 784

Query: 523 QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                                     + +A  +  EM N G A   + ++ L+   CK G
Sbjct: 785 -------------------------DLEQALFLTEEMFNRGYAHVSL-FSTLVRGFCKRG 818

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             Q+  +L+ VM+   I+P+  T   ++T F K
Sbjct: 819 RLQETEKLLHVMMDREIVPNAQTVENVITEFGK 851



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 2/188 (1%)

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+D Y K G++  A QV   M  +   P     N ++  L +  +++    L    +  G
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D  TY+T +  +        A  +F EMR    A+N+V YN++I+ LC+ G  ++A 
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              + M+ +G+ PD  TY  L+    K    +E   L D+M  SG+ P+   Y  ++   
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360

Query: 649 LGE-KSAE 655
           + E K+AE
Sbjct: 361 MKEGKAAE 368



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 96/206 (46%), Gaps = 4/206 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++ +L+    ++   E A  ++ ++  +G    I  +N  +    +  +I R   ++  +
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI 726

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           ++ G + N  T+  +I   CK   + +A  LY  ML  GI P+   +N++        DL
Sbjct: 727 LAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADL 786

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL L  +M     +    +    + ++ GFCK GR++  E++ + M+   I  N +T 
Sbjct: 787 EQALFLTEEM----FNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTV 842

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR 353
             +I  + + G   EA R+  E+ ++
Sbjct: 843 ENVITEFGKAGKLCEAHRVFAELQQK 868


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 181/656 (27%), Positives = 289/656 (44%), Gaps = 93/656 (14%)

Query: 46  RKW---KILEQMAPSLTNSLVNRVVSEFRK-----SPKLALEFYTWVGENNRFSHSLESS 97
           R+W   +  +++AP +T +    V   FR       P  AL F+ WV     F H+  S 
Sbjct: 37  RRWNKGRAYKRLAPFVTAA---HVADLFRAPVAPLDPATALAFFEWVARRPGFRHTAASH 93

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
            A++ LL   R                                     PA +D LV +  
Sbjct: 94  AALLQLLARRR------------------------------------APANYDKLVVSMI 117

Query: 158 QIGAT----EGAYDVIQKLKVKGH---SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
               T      A D IQ ++  G    ++S   +N  L  L++ +      KLY ++V  
Sbjct: 118 SCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQE 177

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEACQVGDLEF 269
           G + +  T+N +I A CKE  L  A   Y+R+L+ SG+  +    N ++   C+ GDL  
Sbjct: 178 GLLPDTVTYNTMIMAYCKEGSLAIA-HRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRK 236

Query: 270 ALKLFRKMGVMS--------------------------------GDSVLPNSVTHNCIIN 297
           A  L   M +M                                  D   PN  T+  +I 
Sbjct: 237 ACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIR 296

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK GR+  A  +   M + G+  +V TY  +IDGY + G  ++AL +   M   G  P
Sbjct: 297 GLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNP 356

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           ++  YNS IH L   G  + A  +L+  I +   P   T++ +  G C+   +  A ++ 
Sbjct: 357 DDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVK 415

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           + ++      D  +Y +LI+ L K + L  AK  L+ +   GL P+++ Y ++ID YCK 
Sbjct: 416 SIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKV 475

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITY 536
           G +  A++V++  +    +PN   Y+S+I GL +D  L  A +L+   Q  G+    ITY
Sbjct: 476 GKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITY 535

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            TLI G     +   AF +F  M   G+  ++  YN+L + LCK G   +A E    ++ 
Sbjct: 536 TTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVK 592

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            G++   VTYT+LV  FSK  + E    L + MV  G   D+ TY+ ++  L  +K
Sbjct: 593 KGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQK 648



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 216/440 (49%), Gaps = 6/440 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   N++T+ L+I  LCKE ++ +A  L   M + G+ P+V  +N +I+  C+ G 
Sbjct: 279 MLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGR 338

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ AL +     +M G+   P+  T+N +I+G C  G+ + AEE+    I  G    V T
Sbjct: 339 LKDALGI---KTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVIT 394

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  +I+GY +    ++ALR+   M+      +   Y   I  L  +  ++ A   L+++ 
Sbjct: 395 FTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIF 454

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + P+   Y+ +    C+ G V  A ++      E    +A++Y+ LI  L +   L 
Sbjct: 455 ANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLH 514

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L++ M   G+ P +ITY TLI G CK    + A +++E M++    P+   YN + 
Sbjct: 515 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 574

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           + LCK    + A S L   ++  +L  +TY +L++G+   G    A A+  +M N G   
Sbjct: 575 DALCKSGRAEEAYSFL--VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKA 632

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y++L+  LCK     +A  ++  M L G+  + V YT +++   K    +    + 
Sbjct: 633 DSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMF 692

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
           ++M+ SG  P   TY   IS
Sbjct: 693 NEMISSGHKPSAITYTVFIS 712



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 233/503 (46%), Gaps = 23/503 (4%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +++     +G S ++  + N ++   K  +I    ++   M+S     ++  +
Sbjct: 371 GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAY 430

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            ++I  L K+ +L+EA      +  +G+ PNVV +  II+  C+VG +  AL++F+   +
Sbjct: 431 GVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK---L 487

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              +   PN+ T++ +I G  +  ++  A  +   M + GI   V TY TLI G  +   
Sbjct: 488 TEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 547

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            + A RL + M + GL P+   YN     L   G  E A    S ++ K +     TY+ 
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTS 604

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G  + G  + A  L  +++ E    D+++Y++L+  LCK   L  A  +L  M +RG
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRG 664

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  +I+ Y  +I    K G  + A  ++  M     KP+ + Y   I+  CK   ++ A 
Sbjct: 665 VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAG 724

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L+   +R G+  D +TYN  ING    G +  AF+    M +     N   Y +L+   
Sbjct: 725 HLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHF 784

Query: 579 CKF-----------GCYQQAR-----ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            K            G +   +     +L++ M+ HG+ P  VTY++++  F K    EE 
Sbjct: 785 LKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEA 844

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
             L D M+   +SP+ + Y  +I
Sbjct: 845 CVLLDHMLGKDISPNEEIYTMLI 867



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 228/506 (45%), Gaps = 8/506 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L++   +      A  ++  +   G S ++H +   +  L K   I    
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EM   G V +V T+N +I   CK  +L++AL +   M  +G  P+   +N +I+  
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G  + A +L     +  G S  P  +T   IING+CK  +++ A  ++  MI +   
Sbjct: 369 CG-GKPDEAEELLNG-AIARGFS--PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCK 424

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +++ Y  LI    +    +EA    +E+   GL PN V+Y S I      G V  AL V
Sbjct: 425 LDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEV 484

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
                 +   P+ +TYS L  GL ++  + +A  L  ++ E+ +     +Y  LI   CK
Sbjct: 485 FKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 544

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +    A +L   M   GL PD   Y  L D  CK G  E A         V  K   V 
Sbjct: 545 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTK---VT 601

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y S+++G  K  + + A +L++     G   D+ TY+ L+       K+ EA ++  +M 
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMT 661

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  N V Y I+I+ + K G +  A+ +   MI  G  P  +TYT  ++ + K    E
Sbjct: 662 LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIE 721

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIIS 646
           E   L  +M  +GV+PD  TYN  I+
Sbjct: 722 EAGHLIGEMERNGVAPDVVTYNVFIN 747



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 223/487 (45%), Gaps = 23/487 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  L+    +    + A D + ++   G S ++  + + +    K+ ++G   
Sbjct: 423 CKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAAL 482

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +++K     G   N  T++ +IY L ++ KL +A++L  +M + GI P V+ +  +I   
Sbjct: 483 EVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 542

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+  + + A +LF    +M  + + P+   +N + +  CK GR   AEE    ++K G+ 
Sbjct: 543 CKKHEFDNAFRLFE---MMEQNGLTPDEQAYNVLTDALCKSGR---AEEAYSFLVKKGVV 596

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
               TY +L+DG+++ G++E A  L ++MV  G   ++  Y+  +  L  +  +  AL +
Sbjct: 597 LTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSI 656

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M  + +  +   Y+I+   + + G    A  + N+++       A +Y + I+  CK
Sbjct: 657 LDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCK 716

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  L+  M   G+ PD++TY   I+G    G ++ A    + M     +PN   
Sbjct: 717 IGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWT 776

Query: 502 Y---------NSIINGLCKDAS-------LDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           Y          S+ N    D S       LD    LL+   + GL   A+TY+++I G+ 
Sbjct: 777 YWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFC 836

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
              ++ EA  +   M    I+ N+  Y +LI   C    +++A   +  MI  G  P   
Sbjct: 837 KATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLE 896

Query: 605 TYTTLVT 611
           +Y  L+T
Sbjct: 897 SYHYLIT 903



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 204/476 (42%), Gaps = 23/476 (4%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L  +E C+     + +L+    Q      A  +I K++  G +  +  +   +    K +
Sbjct: 487 LTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 546

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           E    ++L++ M   G   +   +N++  ALCK  + EEA S    ++K G+    V + 
Sbjct: 547 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYT 603

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +++   + G+ EFA  L  K   M  +    +S T++ ++   CK  ++  A  I   M
Sbjct: 604 SLVDGFSKAGNTEFAAALIEK---MVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQM 660

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
              G+  N+  Y  +I    + G  + A  + +EM+  G  P+ + Y   I      G +
Sbjct: 661 TLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRI 720

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           E A  ++ +M    + PD  TY++   G    G +  AF    ++++     + ++Y +L
Sbjct: 721 EEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLL 780

Query: 436 INYLCKSN----------------NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + +  K +                 L    QLL  M+  GL P  +TY ++I G+CK   
Sbjct: 781 LKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 840

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNT 538
           +E A  + ++M   +  PN  IY  +I   C     + A S +      G    + +Y+ 
Sbjct: 841 LEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHY 900

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           LI G    G   +A A+F ++  +    N+V + IL + L K G      +L+  M
Sbjct: 901 LITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAM 956



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 209/464 (45%), Gaps = 46/464 (9%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           FD+A  L   +M  N ++P E                  ++ L  A  + G  E AY  +
Sbjct: 548 FDNAFRLF-EMMEQNGLTPDE----------------QAYNVLTDALCKSGRAEEAYSFL 590

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            K   KG  ++   + + +    K         L ++MV+ G   + +T+++++ ALCK+
Sbjct: 591 VK---KGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQ 647

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            KL EALS+  +M   G+  N+V + +II+E  + G  + A  +F +M + SG    P++
Sbjct: 648 KKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEM-ISSGHK--PSA 704

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           +T+   I+ +CK+GR+E A  +   M + G+  +V TY   I+G    G  + A      
Sbjct: 705 ITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKR 764

Query: 350 MVKRGLMPNNVVYN-----------STIHWLFAEG-----DVEGALFVLSDMIDKHICPD 393
           M+     PN   Y            +  H++   G      ++    +L  M+   + P 
Sbjct: 765 MIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPT 824

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TYS +  G C+   +++A  L + +L + +  +   Y +LI   C       A   ++
Sbjct: 825 AVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVT 884

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
           +MI  G  P + +Y  LI G C  G+ + A  ++ ++ +++   N V +  + +GL K  
Sbjct: 885 NMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAG 944

Query: 514 SLDAAKSLLQASQ-RIGLLDAITYNTLINGYFINGKIAEAFAMF 556
            +D    LL A + R   +D+ TY+ + N       I EA  M+
Sbjct: 945 HVDICSQLLSAMENRHCRIDSETYSMVTN------NIHEASGMY 982



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 174/378 (46%), Gaps = 27/378 (7%)

Query: 130 EFLEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           EF   L++    E CKA    +  L++A  +      A  ++ ++ ++G   +I A+   
Sbjct: 616 EFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTII 675

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +S ++K  +      ++ EM+S G+  +  T+ + I + CK  ++EEA  L   M ++G+
Sbjct: 676 ISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGV 735

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG---- 303
            P+VV +N+ IN    +G ++ A    ++M   S +   PN  T+  ++  F K+     
Sbjct: 736 APDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCE---PNYWTYWLLLKHFLKMSLANA 792

Query: 304 ------------RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
                       +++   ++   M+K G++    TY+++I G+ +    EEA  L D M+
Sbjct: 793 HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHML 852

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            + + PN  +Y   I         E A   +++MI+    P   +Y  L  GLC  G   
Sbjct: 853 GKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYD 912

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L   +LE     +  ++ IL + L K+ ++    QLLS+M  R    D  TY  + 
Sbjct: 913 KAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVT 972

Query: 472 DGYCKGGNIEGAVQVYEN 489
           +      NI  A  +YE+
Sbjct: 973 N------NIHEASGMYES 984



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 1/227 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YN+ +  L + +      +L S ++  GL+PD +TY T+I  YCK G++  A + +  ++
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +   + +    N+++ G C+   L  A  LL     +G   +  +Y  LI G      + 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EA  +   M   G + N   Y +LI  LCK G    AR L+  M   G++P   TY  ++
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
             + K+   ++ + +   M  +G +PD+ TYN++I  L G K  E +
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAE 377


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 256/535 (47%), Gaps = 40/535 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + A+++A  + G  +  ++++ +L   G   ++  +N  +  L K   +   ++L   M 
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +V TF ++I  L +  +  E   +   M + G+ PN V +N +I   C+ G   
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL+LF +M +     + P +VT+N I    CK G +E AE I   M+  G+  +   + 
Sbjct: 344 QALRLFDEMVL---KKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFN 400

Query: 329 TLIDGY-ARGGSSEEALRLCDEMVKRGLMPNN---------------------------- 359
           T++     R    E  + + +EMV RG+ PN+                            
Sbjct: 401 TVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLN 460

Query: 360 -------VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
                     N+ IH L     ++ A  V+  M++K I  D  TY+I+ +G C++  +++
Sbjct: 461 KGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEE 520

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A KLH  +       D +++N L++  C    +     LL  M   GL PDI++YGT+ID
Sbjct: 521 AIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIID 580

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G+CK  +I  A +    +     KPN+ IYN++I G  ++  +  A   ++  +  G+  
Sbjct: 581 GHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQP 640

Query: 533 A-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
             +TY +L+      G + EA  +FS+ R   + +  +GY I+I   CK G   +A    
Sbjct: 641 TNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 700

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + M   GI P+ +TYTTL+  +SK+ + EE  +L D+MV SGV PDN TY  +I+
Sbjct: 701 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIA 755



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 250/534 (46%), Gaps = 34/534 (6%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   ++ L+ A  + G  E A+ +  +++  G + S+  +   ++ L +    G    
Sbjct: 253 QPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGI 312

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + +EM   G   N   +N +I   C++    +AL L+  M+   + P  V +N+I    C
Sbjct: 313 VLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALC 372

Query: 263 QVGDLEFALKLFRKM---------------------------------GVMSGDSVLPNS 289
           + G++E A ++   M                                   M    + PN 
Sbjct: 373 KEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPND 432

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
                 +   CK G+ + A  I +  +  G+  N+ T   LI G   G   +EA ++   
Sbjct: 433 PLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQT 492

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+ +G+  +++ YN  I     +  +E A+ +  DM  +   PD FT++ L    C  G 
Sbjct: 493 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 552

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +++ F L +Q+  E +  D  SY  +I+  CK+ ++  AK+ L+ ++ RGL P++  Y  
Sbjct: 553 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 612

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRI 528
           LI GY + G+I GA+   E MK    +P  V Y S++  +C    ++ AK++  QA +  
Sbjct: 613 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 672

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
             L  I Y  +I GY   GK+ EA A F EMR+ GI+ NK+ Y  L+    K G  ++A 
Sbjct: 673 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 732

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
           +L   M+  G+IPD +TY TL+ R S+  S ++ I    ++    ++ D++ YN
Sbjct: 733 KLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYN 786



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 38/365 (10%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEG 377
           G   +++T    ++   R G  + A  + DEM + R +  N   Y + I  L   G V+ 
Sbjct: 180 GAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDA 239

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
              +L+++    + P   TY++L   LC++G V++AF+L  ++ +  M     ++ ILIN
Sbjct: 240 GFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILIN 299

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            L +         +L  M   G+ P+ + Y  LI  +C+ G+   A+++++ M   + KP
Sbjct: 300 GLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKP 359

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF-AM 555
             V YN I   LCK+  ++ A+ +L+    IG+ +    +NT++       +  E+  ++
Sbjct: 360 TAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSI 419

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQA---------------------------- 587
            +EM   G+  N       +  LCK G +Q+A                            
Sbjct: 420 TNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCE 479

Query: 588 ----RELMKV---MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
               +E  KV   M+  GI  D +TY  ++    K+   EE I+LH DM   G  PD  T
Sbjct: 480 GKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFT 539

Query: 641 YNAII 645
           +N ++
Sbjct: 540 FNTLL 544



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 2/219 (0%)

Query: 433 NILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           N  +  L ++  L AA+++   M   R +  +  +Y  +I   CK G ++   ++   + 
Sbjct: 189 NAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELW 248

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIA 550
           +   +P +V YN +++ LCK   ++ A  L    ++ G+  ++ T+  LING     +  
Sbjct: 249 RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFG 308

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           E   +  EM  +G++ N+V YN LI + C+ G   QA  L   M+L  + P  VTY  + 
Sbjct: 309 EVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIA 368

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
               K    E    + +DM+  G++     +N +++ LL
Sbjct: 369 KALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 407



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 8/219 (3%)

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP- 497
           LC++   A A ++LSS   RG  P I T    ++   + G ++ A +V++ M++      
Sbjct: 166 LCRA---ADAFRVLSS---RGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVAL 219

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           N   Y ++I  LCK   +DA   +L    R GL   + TYN L++    +G++ EAF + 
Sbjct: 220 NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 279

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             M   G+  + V + ILIN L +   + +   +++ M   G+ P+ V Y  L+    + 
Sbjct: 280 GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 339

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
               + + L D+MVL  + P   TYN I   L  E   E
Sbjct: 340 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEME 378


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 263/530 (49%), Gaps = 25/530 (4%)

Query: 135 LLDSYEICKATPAVFDA------LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L +S  +  A P+V DA      L   C Q G  + A  +   L+V  H   + +  N +
Sbjct: 40  LPESPALLSALPSVRDAVSYNTVLAALCRQ-GCLDAALFL---LRVMSHEPRLASRPNAI 95

Query: 189 SHLVKLNEI------GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           S+   +  +       +   L + M  CG   +V T+  +I  LC    ++ A+ L   M
Sbjct: 96  SYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            +SGI PNVV ++ +++  C+ G  E   K+F +M   SG  + P+ V +  +I+  C+ 
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEM---SGRGIEPDVVMYTALIDSLCRH 212

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G+V+ A  +   M + G++ NV TY  LI+   + GS  EAL L   M ++G+ P+ V Y
Sbjct: 213 GKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTY 272

Query: 363 NSTIHWLFAEGDVEGALFVLSDMI--DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           N+ I  L +  +++ A+ +L +M+  +  + PD  T++ +  GLC+ G ++QA ++   +
Sbjct: 273 NTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMM 332

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E     +  ++N+LI  L + + +  A +L+  M   GL PD  TY  LI+G+CK   +
Sbjct: 333 AENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQV 392

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLI 540
           E A      M+    +P  V Y  ++  +C    +  A+ L     R   LDA  Y+T+I
Sbjct: 393 ERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMI 452

Query: 541 NGYFING--KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +G F +G  KIAE F    +M + G+  + V Y+I IN   K G    A  ++K M   G
Sbjct: 453 HGAFKSGEKKIAEEF--LKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASG 510

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +PD   + +L+  +      E+++EL  +M    V+ D +  + I++ L
Sbjct: 511 FVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 4/276 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           +  LE ++      +     F++++    +IG    A  V   +   G   ++ A+N  +
Sbjct: 289 MALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
             L++++++ +  +L  EM S G   +  T++++I   CK  ++E A S    M   G+ 
Sbjct: 349 GGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGME 408

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P  V +  ++   C  G +  A  LF +M      +   ++  ++ +I+G  K G  + A
Sbjct: 409 PEPVHYIPLLKAMCDQGMMGQARDLFNEM----DRNCKLDAAAYSTMIHGAFKSGEKKIA 464

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           EE    MI  G+  +  TY+  I+ +A+ G    A R+  +M   G +P+  V++S I  
Sbjct: 465 EEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQG 524

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
             A+GD E  L +  +M  K +  D    S +   L
Sbjct: 525 YGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 255/508 (50%), Gaps = 7/508 (1%)

Query: 54  MAPSLTNSLVNRVVSEFR-KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           +  +LT++++N+V+         ++  F+ WV  N    HSL+SS  ++H L   ++F  
Sbjct: 34  VGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKT 93

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           A  L+  +   + +S    L  ++  ++   +   +   LV        T+ A  V + +
Sbjct: 94  AQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHM 153

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           +V G    +HA    L+ L K       WK+YK+MV  G V N++ FN++I+A CK   +
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDV 213

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           E+A  L   M    I+P++  +N +I+  C+ G    AL +  +M       V P+ VT+
Sbjct: 214 EKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM---ERGGVSPDIVTY 270

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I GFC+ GR+   E +R      G   N  TY TLIDGY R    EEALRL + M  
Sbjct: 271 NSLIYGFCREGRMR--EALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEV 328

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            GL P  V YNS +  L  EG ++ A  +L++M ++ + PD+ T + L    C+ G +  
Sbjct: 329 EGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGS 388

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A K+  ++LE  +  D +++  LI+  CK + + +AK+ L  M+  G  P   TY  L+D
Sbjct: 389 AMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 448

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
            Y    N E  +++ + + +     ++ +Y ++I  LCK   +++A+ +    Q  G+  
Sbjct: 449 SYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG 508

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEM 559
           D++ Y +L   YF  GK   A  M  EM
Sbjct: 509 DSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 195/398 (48%), Gaps = 6/398 (1%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           ++A+ ++  M   G  P++    +++N   +        K+++KM V  G  V+PN    
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKM-VRVG--VVPNIHIF 200

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I+  CK G VE AE++   M    I  ++ TY TLI  Y + G   EAL + D M +
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+ V YNS I+    EG +  AL +  ++      P+H TY+ L  G CR   +++
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEE 318

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   +  E +     +YN ++  LC+   +  A +LL+ M  R + PD +T  TLI+
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
            YCK G++  A++V + M +   KP+   + ++I+G CK   +D+AK  L      G   
Sbjct: 379 AYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSP 438

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           +  TY+ L++ Y+          +  E+   G+ V+   Y  LI  LCK    + A  + 
Sbjct: 439 SYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIF 498

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            +M   G+  D V YT+L   + K        ++ D+M
Sbjct: 499 TLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 167/331 (50%), Gaps = 3/331 (0%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   ++     L++  A+   +    ++  +MV+ G++PN  ++N  IH     GDVE A
Sbjct: 157 GFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKA 216

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L++M  + I PD FTY+ L    C+ G   +A  + +++    +  D  +YN LI  
Sbjct: 217 EQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYG 276

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C+   +  A +L     + G  P+ +TY TLIDGYC+  ++E A+++ E M+     P 
Sbjct: 277 FCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPG 334

Query: 499 LVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           +V YNSI+  LC++  +  A  LL + S+R    D +T NTLIN Y   G +  A  +  
Sbjct: 335 VVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKK 394

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           +M   G+  ++  +  LI+  CK      A+E +  M+  G  P Y TY+ LV  +    
Sbjct: 395 KMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQD 454

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + E VI L D++   G+  D   Y A+I  L
Sbjct: 455 NKEAVIRLPDELSRKGLFVDISVYRALIRRL 485



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 167/341 (48%), Gaps = 13/341 (3%)

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHWLFAEGDVE 376
           D N +  + L+  YA    +++A+++ + M   G  P+     V+ NS      A+  + 
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNS-----LAKARLT 178

Query: 377 GALF-VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             ++ V   M+   + P+   +++L    C++G V++A +L N++    +  D ++YN L
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK      A  +   M   G+ PDI+TY +LI G+C+ G +  A++++  +     
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA-- 296

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFA 554
            PN V Y ++I+G C+   L+ A  L +  +  GL   + TYN+++      GKI +A  
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           + +EM    +  + V  N LIN  CK G    A ++ K M+  G+ PD  T+  L+  F 
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           K    +   E   +M+ +G SP   TY+ ++     + + E
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKE 457



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+ +   S     A Q+   M V G  P +     L++   K        +VY+ M +V 
Sbjct: 133 LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVG 192

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             PN+ I+N +I+  CK   ++ A+ LL +   R    D  TYNTLI+ Y   G   EA 
Sbjct: 193 VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEAL 252

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +   M   G++ + V YN LI   C+ G  ++A  L +   ++G  P++VTYTTL+  +
Sbjct: 253 GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGY 310

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +    EE + L + M + G+ P   TYN+I+  L  E   +D
Sbjct: 311 CRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 258/548 (47%), Gaps = 51/548 (9%)

Query: 149 FDALVR---ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           F+ L++   +C+++      +  I KL   G    +  +   L  L   + +      + 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKL---GLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +M       NV TF  ++  LC+E ++ EA++L  RM++ G+ P  + +  I++  C+ G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 266 DLEFALKLFRKM---------------------------------GVMSGDSVLPNSVTH 292
           D   AL L RKM                                   M    + P+  T+
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I GFC  GR   AE++   M++  I  +V TY  LI+ + + G   EA  L DEM+ 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG++PN + Y+S I     +  ++ A  +   M  K   P+  T++ L  G C    +  
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
             +L +++ E  +V D  +YN LI+      +L AA  LL  MI  GL PDI+T  TL+D
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 473 GYCKGGNIEGAVQVYENMKKVEK-----------KPNLVIYNSIINGLCKDASLDAAKSL 521
           G C  G ++ A+++++ M+K +K           +P++  YN +I+GL  +     A+ L
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +     G++ D ITY+++I+G     ++ EA  MF  M +   + N V +  LIN  CK
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCK 593

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G      EL   M   GI+ + +TY TL+  F K  +    +++  +M+ SGV PD  T
Sbjct: 594 AGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTIT 653

Query: 641 YNAIISPL 648
              +++ L
Sbjct: 654 IRNMLTGL 661



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 266/536 (49%), Gaps = 24/536 (4%)

Query: 132 LEGLLDSYEI------CKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           ++GL D+ ++       +  P+V D   L+    ++   +    + QK++ K     I++
Sbjct: 57  IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 116

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +      +++      + ++   G   +V TF  +++ LC E ++ EAL  +++M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++   PNVV F  ++N  C+ G +  A+ L  +   M  D + P  +T+  I++G CK G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDR---MMEDGLQPTQITYGTIVDGMCKKG 233

Query: 304 RVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
               A  +   M +   I  NV  Y+ +ID   + G   +A  L  EM ++G+ P+   Y
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS I    + G    A  +L +M+++ I PD  TY+ L     + G   +A +L++++L 
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +  +Y+ +I+  CK N L AA+ +   M  +G  P++IT+ TLIDGYC    I+ 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
            +++   M +     +   YN++I+G      L+AA  LLQ     GL  D +T +TL++
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 542 GYFINGKIAEAFAMFSEMRNV-----------GIAVNKVGYNILINFLCKFGCYQQAREL 590
           G   NGK+ +A  MF  M+             G+  +   YNILI+ L   G + +A EL
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + M   GI+PD +TY++++    K    +E  ++ D M     SP+  T+  +I+
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 589



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 5/385 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  LE A+ LF  M        LP+ V    ++    ++ R +    +   M +  I C
Sbjct: 56  EIKGLEDAIDLFSDM---LRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ ++  LI  +        AL    ++ K GL P+ V + + +H L  E  V  AL   
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +    P+  T++ L  GLCR G + +A  L ++++E+ +     +Y  +++ +CK 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 443 NNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +  +A  LL  M  V  +IP+++ Y  +ID  CK G    A  ++  M++    P+L  
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 502 YNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YNS+I G C       A+ LLQ   +R    D +TYN LIN +   GK  EA  ++ EM 
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N + Y+ +I+  CK      A  +  +M   G  P+ +T+ TL+  +      +
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + +EL  +M  +G+  D  TYN +I
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLI 437



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 180/362 (49%), Gaps = 2/362 (0%)

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +GF ++  +E A ++   M+++    +V  +  L+    R    +  + L  +M ++ + 
Sbjct: 52  SGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIR 111

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            +   +N  I    +   +  AL     +    + PD  T++ L  GLC    V +A   
Sbjct: 112 CDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDF 171

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +Q+ E     +  ++  L+N LC+   +  A  LL  M+  GL P  ITYGT++DG CK
Sbjct: 172 FHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCK 231

Query: 477 GGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
            G+   A+ +   M++V    PN+VIY++II+ LCKD     A++L    Q  G+  D  
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLF 291

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN++I G+  +G+ ++A  +  EM    I+ + V YN LIN   K G + +A EL   M
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  GIIP+ +TY++++  F K    +    +   M   G SP+  T+N +I    G K  
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 655 ED 656
           +D
Sbjct: 412 DD 413



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 191/390 (48%), Gaps = 14/390 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++++      G    A  ++Q++  +  S  +  +N  ++  VK  +     +LY EM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G + N  T++ +I   CK+ +L+ A  ++Y M   G  PN++ FN +I+  C    +
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRI 411

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  ++L  +M   +   ++ ++ T+N +I+GF  +G +  A ++   MI +G+  ++ T 
Sbjct: 412 DDGMELLHEM---TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR-----------GLMPNNVVYNSTIHWLFAEGDVE 376
            TL+DG    G  ++AL +   M K            G+ P+   YN  I  L  EG   
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +  +M  + I PD  TYS +  GLC+   + +A ++ + +  +    +  ++  LI
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N  CK+  +    +L   M  RG++ + ITY TLI G+ K GNI GA+ +++ M      
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           P+ +   +++ GL     L  A ++L+  Q
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 296/603 (49%), Gaps = 32/603 (5%)

Query: 61  SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
           SL  R V   + SP   L    + G +        S  A++HL     + D+A+ L G +
Sbjct: 2   SLAKRFVHLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHL-----KLDEAVDLFGEM 56

Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           + +                   +  P++  F  L+ A  ++   +      +K+++ G S
Sbjct: 57  VKS-------------------RPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
            +++ +N  ++ L + +++     +  +M+  GY  ++ T N ++   C   ++ EA++L
Sbjct: 98  HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             +M++ G  P+ V F  +++   Q      A+ L  +M V       P+ VT+  +ING
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV---KGCQPDLVTYGAVING 214

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK G  + A  +   M K  I+ +V  Y+T+ID   +    ++AL L  EM  +G+ P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
              Y+S I  L   G    A  +LSDM+++ I P+  T++ L     + G + +A KL +
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++++  +  +  +YN LIN  C  + L  A+Q+ + M+ +  +PD++TY TLI+G+CK  
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYN 537
            +   ++++ +M +     N V Y ++I+G  + +  D A+ + +     G+   I TYN
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TL++G   NGK+ +A  +F  ++   +  +   YNI+   +CK G  +   +L   + L 
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAE 655
           G+ PD + Y T+++ F K    EE   L   M   G  PD+ TYN +I   L  G+K+A 
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574

Query: 656 DQV 658
            ++
Sbjct: 575 AEL 577



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 208/413 (50%), Gaps = 5/413 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     + A++    + G  + A +++ K++       +  ++  +  L K   +    
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM + G   +V T++ +I  LC   +  +A  L   ML+  I PNVV FN +I+  
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KLF +M   S D   PN VT+N +INGFC   R++ A++I   M+     
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSID---PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY TLI+G+ +     + + L  +M +RGL+ N V Y + IH  F   D + A  V
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + P+  TY+ L  GLC+NG +++A  +   + +  M  D Y+YNI+   +CK
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ PD+I Y T+I G+CK G  E A  ++  MK+    P+   
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +      DA TY  L+     +G++ + F
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 609



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 21/416 (5%)

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           R  P LAL     + E  +    +     ++  L  +R  DDAL L    M    + P  
Sbjct: 218 RGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE-MDNKGIRPDV 275

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F                 + +L+      G    A  ++  +  +  + ++  +N+ +  
Sbjct: 276 F----------------TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
             K  ++    KL+ EM+      N+ T+N +I   C   +L+EA  ++  M+     P+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV +N +IN  C+   +   ++LFR M   S   ++ N+VT+  +I+GF +    + A+ 
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDM---SRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+  G+  N+ TY TL+DG  + G  E+A+ + + + K  + P+   YN     + 
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G VE    +   +  K + PD   Y+ +  G C+ G  ++A+ L  ++ E+  + D+ 
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
           +YN LI    +  + AA+ +L+  M       D  TYG + D    G   +G ++V
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEV 612


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 255/535 (47%), Gaps = 28/535 (5%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C+     +  L+      G    A+D+I+++ + G   + H     +  L  +     
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            W+L+ +M + G   NV T+  +I  LC    L+ A+ L++RM + G++PN V +N +IN
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              +   +++A   F  + +M  +   PN VT+N +I G+C LG  + A  +   M++ G
Sbjct: 399 ILVENRRIKYA---FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              N+ TY T+I GY   G++  ALR+ D M   G  P+   Y   I        +E A 
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + ++M+D  +CP+  TY+ L  G C++  +  A  L   +       +  +YN+LI+ L
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K NN + A++L   MI  G+ P+++TY  +IDG CK G+   A++++  M +    PNL
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y+S+I  L ++  ++ A++L    +R GL+ D ITY  +I  Y ++GK+  AF     
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 559 MRNVGIAVNKVGYNILINFL--------------------CKFGCYQQARELMKVMI--L 596
           M   G       Y +LI  L                    C FG     ++ + VM   L
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 755

Query: 597 HGIIP--DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             + P         LV+  S      E  EL   M+  G+ PD + YN+++  LL
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 248/506 (49%), Gaps = 4/506 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+++C    A       +  L   G  + + A++  L HL +L         Y  M+S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              N+  +N VI ALCK+  + +A ++  ++ +S + P+   +  +I   C+  DL+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++F +M   + +   PN+VT++ +ING C  GRV  A ++   MI  GI     T    I
Sbjct: 271 QVFNQM---AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A RL  +M  +G  PN   Y + I  L   G ++ A+ +   M    + 
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ L   L  N  +K AF + N +       +  +YN +I   C   +   A  +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +++M+ RG   +++TY T+I GYC  GN   A+++ + M+    KP+   Y  +I G CK
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
            + +++A  L       GL  + +TY  LI+GY  + K+  A ++   M+  G   N   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN+LI+ L K   +  A EL KVMI  GI P+ VTYT ++    KN S    +E+ + M+
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G  P+  TY+++I  L  E   E+
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEE 653



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 222/529 (41%), Gaps = 63/529 (11%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     + AL+      G  + A  +  ++   G   +   +N  ++ LV+   I   +
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +   M   G   N+ T+N +I   C     ++A+ +   ML+ G   N+V +N II   
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G+   AL++   + +M      P+  ++  +I GFCK+ ++E A  +   M+  G+ 
Sbjct: 471 CDSGNTTSALRI---LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY  LIDGY +    + A  L + M + G  PN   YN  IH L  + +  GA  +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI++ I P+  TY+ +  GLC+NG    A ++ N+++E+  + +  +Y+ LI  L +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A+ L + +   GLIPD ITY  +I+ Y   G +E A      M K   +P L  
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 502 YNSIINGL-------------------------------------CKDASLDAAKSL--- 521
           Y  +I GL                                      K A LD   S+   
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 522 -------------LQASQRIGLL-------DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
                         +A++ +G +       D   YN+L+        +  A  +F  M  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            G  V+  GY  LI  LC+    ++AR   + M++    PD V    L+
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 228/523 (43%), Gaps = 61/523 (11%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL----- 129
           K+A+  +  +  +  F +++  + A++++LV  RR   A +++ NLM  N  SP      
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYN-ALINILVENRRIKYAFVVL-NLMGRNGCSPNIVTYN 429

Query: 130 EFLEG---LLDSYEIC-----------KATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           E ++G   L D  +              A    ++ +++     G T  A  ++  ++  
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G      ++   +    K++++   + L+ EMV  G   N  T+  +I   CK+ KL+ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
            SL   M +SG  PNV  +N++I+   +  +   A +L +   VM  + + PN VT+  +
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK---VMIEEGIFPNVVTYTAM 606

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK G    A E+   MI+ G   N+ TY++LI    + G  EEA  L  E+ + GL
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+ + Y   I      G VE A   L  MI     P  +TY +L KGL      K  + 
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYL 720

Query: 416 LHNQVLE-------------EHMVGDAYS-----------------YNILINYLCKSNNL 445
           L +Q L              +    DA S                  N L++ L  +   
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +LL SMI +GL PD   Y +L+    +  N++ A+ V+++M     + +L  Y  +
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 506 INGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFING 547
           I  LC+      A+   +    R    D +    LI+G   +G
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 177/445 (39%), Gaps = 72/445 (16%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           S N+ S L  L+ + D    CK     +  L+    +I   E A+ +  ++   G   + 
Sbjct: 473 SGNTTSALRILDLMRDGG--CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             +   +    K  ++     L + M   G   NV T+N++I+ L K+     A  L   
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ GI+PNVV +  +I+  C+ G    AL++F KM +  G   LPN +T++ +I    +
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM-IEQG--CLPNLLTYSSLIRALGQ 647

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN--- 358
            G+VE AE +   + + G+  +  TY  +I+ Y   G  E A      M+K G  P    
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 359 -----------------------NVVYNSTIHWLFAEGD-------------------VE 376
                                  +VV N +  +   + D                   V+
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 377 GALF--------------VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA---FK-LHN 418
            AL               +L  MI + +CPD   Y+ L   L R   V  A   FK +  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           Q  E H+ G    Y  LI  LC+ +    A+    +M++R   PD +    LIDG  + G
Sbjct: 828 QGCEVHLNG----YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYN 503
             +  ++    M+     P+  IY 
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYT 908


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 255/508 (50%), Gaps = 7/508 (1%)

Query: 54  MAPSLTNSLVNRVVSEFR-KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           +  +LT++++N+V+         ++  F+ WV  N    HSL+SS  ++H L   ++F  
Sbjct: 34  VGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKT 93

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           A  L+  +   + +S    L  ++  ++   +   +   LV        T+ A  V + +
Sbjct: 94  AQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHM 153

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           +V G    +HA    L+ L K       WK+YK+MV  G V N++ FN++I+A CK   +
Sbjct: 154 RVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDV 213

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           E+A  L   M    I+P++  +N +I+  C+ G    AL +  +M       V P+ VT+
Sbjct: 214 EKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRM---ERGGVSPDIVTY 270

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I GFC+ GR+   E +R      G   N  TY TLIDGY R    EEALRL + M  
Sbjct: 271 NSLIYGFCREGRMR--EALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEV 328

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            GL P  V YNS +  L  EG ++ A  +L++M ++ + PD+ T + L    C+ G +  
Sbjct: 329 EGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGS 388

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A K+  ++LE  +  D +++  LI+  CK + + +AK+ L  M+  G  P   TY  L+D
Sbjct: 389 AMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVD 448

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
            Y    N E  +++ + + +     ++ +Y ++I  LCK   +++A+ +    Q  G+  
Sbjct: 449 SYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKG 508

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEM 559
           D++ Y +L   YF  GK   A  M  EM
Sbjct: 509 DSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 195/398 (48%), Gaps = 6/398 (1%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           ++A+ ++  M   G  P++    +++N   +        K+++KM V  G  V+PN    
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKM-VRVG--VVPNIHIF 200

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I+  CK G VE AE++   M    I  ++ TY TLI  Y + G   EAL + D M +
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+ V YNS I+    EG +  AL +  ++      P+H TY+ L  G CR   +++
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEE 318

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   +  E +     +YN ++  LC+   +  A +LL+ M  R + PD +T  TLI+
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
            YCK G++  A++V + M +   KP+   + ++I+G CK   +D+AK  L      G   
Sbjct: 379 AYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSP 438

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           +  TY+ L++ Y+          +  E+   G+ V+   Y  LI  LCK    + A  + 
Sbjct: 439 SYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIF 498

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            +M   G+  D V YT+L   + K        ++ D+M
Sbjct: 499 TLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 167/331 (50%), Gaps = 3/331 (0%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   ++     L++  A+   +    ++  +MV+ G++PN  ++N  IH     GDVE A
Sbjct: 157 GFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKA 216

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L++M  + I PD FTY+ L    C+ G   +A  + +++    +  D  +YN LI  
Sbjct: 217 EQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYG 276

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C+   +  A +L     + G  P+ +TY TLIDGYC+  ++E A+++ E M+     P 
Sbjct: 277 FCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPG 334

Query: 499 LVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           +V YNSI+  LC++  +  A  LL + S+R    D +T NTLIN Y   G +  A  +  
Sbjct: 335 VVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKK 394

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           +M   G+  ++  +  LI+  CK      A+E +  M+  G  P Y TY+ LV  +    
Sbjct: 395 KMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQD 454

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + E VI L D++   G+  D   Y A+I  L
Sbjct: 455 NKEAVIRLPDELSRKGLFVDISVYRALIRRL 485



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 167/341 (48%), Gaps = 13/341 (3%)

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHWLFAEGDVE 376
           D N +  + L+  YA    +++A+++ + M   G  P+     V+ NS      A+  + 
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNS-----LAKARLT 178

Query: 377 GALF-VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             ++ V   M+   + P+   +++L    C++G V++A +L N++    +  D ++YN L
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK      A  +   M   G+ PDI+TY +LI G+C+ G +  A++++  +     
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA-- 296

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFA 554
            PN V Y ++I+G C+   L+ A  L +  +  GL   + TYN+++      GKI +A  
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           + +EM    +  + V  N LIN  CK G    A ++ K M+  G+ PD  T+  L+  F 
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           K    +   E   +M+ +G SP   TY+ ++     + + E
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKE 457



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 3/223 (1%)

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+ +   S     A Q+   M V G  P +     L++   K        +VY+ M +V 
Sbjct: 133 LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVG 192

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             PN+ I+N +I+  CK   ++ A+ LL +   R    D  TYNTLI+ Y   G   EA 
Sbjct: 193 VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEAL 252

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +   M   G++ + V YN LI   C+ G  ++A  L +   ++G  P++VTYTTL+  +
Sbjct: 253 GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGY 310

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +    EE + L + M + G+ P   TYN+I+  L  E   +D
Sbjct: 311 CRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKD 353


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/440 (32%), Positives = 234/440 (53%), Gaps = 1/440 (0%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A   + D LV A  +   T   ++  ++    G  +S+ + N  +S LVK+ EIG    +
Sbjct: 91  ANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFV 150

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           YKEM+       + +FN+VI  LCK  KL +A  +   M   G+  NV+ +N +I+  C+
Sbjct: 151 YKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCK 210

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G +    K    +  M  D + PN VT N +I+GFCK   V  A ++   M + G+  N
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY +LI+G    G   EA  L D+MV   L PN + +N+ ++       V+ A  +  
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           DM  + I P+  TY+IL    C++  ++ AF L+  +L + +  D  +YN LI  LC+  
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +L AA+ L+S M  + L  D+ITY  LID  C  G ++ A+++ + M +   KP+ + YN
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYN 450

Query: 504 SIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G CK+ +L AA +L    +++G L +  TYN LI G+    K+ +A  + +EM   
Sbjct: 451 TMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEK 510

Query: 563 GIAVNKVGYNILINFLCKFG 582
           G+  N++ Y I+   + + G
Sbjct: 511 GLIPNRMTYEIVTEEMMEKG 530



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 221/438 (50%), Gaps = 15/438 (3%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN---EACQVGDLEFALK-LFR 275
           +++++A  K  +       + R    G+  +V   N +++   +  ++GD+EF  K + R
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY- 334
           +        + P  ++ N +ING CK+G++  A +I   M   G+  NV TY TLIDGY 
Sbjct: 157 R-------RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209

Query: 335 --ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              + G   +A  +  EM   G+ PN V +N  I     + +V  A+ V ++M  + + P
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  TY+ L  GLC NG V +A  L +Q++   +  +  ++N L+N  CK+  +  A +L 
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M  +G+ P++ TY  LID YCK  N+E A  +Y  M      P++  YN +I GLC+ 
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             L+AA++L+       L  D ITYN LI+     G++ +A  +  EM   G+  +++ Y
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N +I+  CK G  + A  L   M   G + +  TY  L+  F K    E+   L ++M+ 
Sbjct: 450 NTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLE 509

Query: 632 SGVSPDNQTYNAIISPLL 649
            G+ P+  TY  +   ++
Sbjct: 510 KGLIPNRMTYEIVTEEMM 527



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 192/382 (50%), Gaps = 7/382 (1%)

Query: 281 SGDSVLPNSVTH-NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           + D  L  SVT  N +++G  K+G +   E +   MI+  I+  + ++  +I+G  + G 
Sbjct: 119 ASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGK 178

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF----VLSDMIDKHICPDHF 395
             +A  + ++M  RG+  N + YN+ I      G + G ++    +L +M    ICP+  
Sbjct: 179 LNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKI-GKMYKADAILKEMRADGICPNEV 237

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++IL  G C++  V  A K+  ++  + +  +  +YN LIN LC +  +  A  L   M
Sbjct: 238 TFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM 297

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           +   L P+IIT+  L++G+CK   ++ A +++++M K    PN+  YN +I+  CKD ++
Sbjct: 298 VNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENM 357

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           + A +L +     G+  D  TYN LI G    G +  A  + SEM    +  + + YNIL
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I+ LC  G  ++A  L+  M   G+ P  +TY T++  + K  +    + L   M   G 
Sbjct: 418 IDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477

Query: 635 SPDNQTYNAIISPLLGEKSAED 656
             +  TYN +I     +   ED
Sbjct: 478 LANVATYNVLIKGFCKKDKLED 499



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 182/371 (49%), Gaps = 4/371 (1%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +SGDS   NS+  + ++  + K  R     E        G+  +V +   L+ G  + G 
Sbjct: 84  VSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGE 143

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +   +  EM++R + P  + +N  I+ L   G +  A  ++ DM  + +  +  TY+ 
Sbjct: 144 IGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNT 203

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           L  G C+ G + + +K    + E    G   +  ++NILI+  CK  N++AA ++ + M 
Sbjct: 204 LIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMN 263

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            +G+ P+++TY +LI+G C  G +  A  + + M     KPN++ +N+++NG CK+  + 
Sbjct: 264 RQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVK 323

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  L     + G+  +  TYN LI+ Y  +  + +AFA++  M   G+  +   YN LI
Sbjct: 324 QAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLI 383

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
             LC+ G  + AR L+  M    +  D +TY  L+         ++ + L D+M   G+ 
Sbjct: 384 AGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLK 443

Query: 636 PDNQTYNAIIS 646
           P   TYN +I 
Sbjct: 444 PSQLTYNTMID 454



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 142/287 (49%), Gaps = 24/287 (8%)

Query: 124 NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           N V+    + GL ++ ++ +AT A+ D +V +C +                     +I  
Sbjct: 270 NVVTYNSLINGLCNNGKVNEAT-ALRDQMVNSCLK--------------------PNIIT 308

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
            N  L+   K   + +  +L+ +M   G   NV T+N++I A CK+  +E+A +LY  ML
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+ P+V  +N +I   C+ GDLE A  L  +M      + L   +T+N +I+  C  G
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADL---ITYNILIDSLCNKG 425

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            ++ A  +   M + G+  +  TY T+IDGY + G+   AL L  +M K G + N   YN
Sbjct: 426 EMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYN 485

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
             I     +  +E A  +L++M++K + P+  TY I+T+ +   G V
Sbjct: 486 VLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 135/270 (50%), Gaps = 4/270 (1%)

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
           C +     IL     +N   +  F+   +  +  +     S N L++ L K   +   + 
Sbjct: 90  CANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEF 149

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   MI R + P +I++  +I+G CK G +  A  + E+MK      N++ YN++I+G C
Sbjct: 150 VYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYC 209

Query: 511 KDASLDA---AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           K   +     A ++L+  +  G+  + +T+N LI+G+  +  ++ A  +F+EM   G+  
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V YN LIN LC  G   +A  L   M+   + P+ +T+  L+  F KN   ++  EL 
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           DDM   G++P+  TYN +I     +++ ED
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMED 359


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 176/642 (27%), Positives = 292/642 (45%), Gaps = 40/642 (6%)

Query: 32  EDIVFRAICVNLRQRKWK------ILEQMAPSLTNS-LVNRVVSEFRKSPKLALEFYTWV 84
            D++F  I    +++ W       + +Q    +T+  L  RV+   R  P++AL F+ WV
Sbjct: 54  RDLIFDTI----KEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWV 109

Query: 85  GENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL------------ 132
                F  S    CAI+ +LV       A  +M  ++S      ++ L            
Sbjct: 110 MAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFD 169

Query: 133 ----EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
                GLL   + C     V    +R    +   +  Y ++++  +K   V+   +N  L
Sbjct: 170 KMIRNGLLPDVKNCNRILRV----LRDENLLSKAKNVYGMMEQFGIKPTVVT---YNTML 222

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               K   + +  +L  EM   G   N  T+N+++  L K+ +LE+A  L   ML SG+ 
Sbjct: 223 DSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
            +   +N +IN  CQ G    A  L  +M         P   T+N ++ G CK  +V   
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEM---VNRRAFPTLSTYNTLMYGLCKWVQVT-G 338

Query: 309 EEIRYA-MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
             +R++ M+K+    ++ ++ +L+ GY R G   EA  L DE+  R L+P  + YN+ IH
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G ++ AL +  +M D+ + PD FTY+IL  G  + G V  A    N++L + +  
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKP 458

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D ++YN  I    K  + + A  +   M+  G  PD+ITY   +   C+ GN E A  + 
Sbjct: 459 DRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLL 518

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFIN 546
           ENM      P+ V Y SIING  K+  L  A+ +       G+  ++ TY  LI+ +   
Sbjct: 519 ENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAK 578

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
             +  AF  FS+M    +  N + YN +IN LC      +A +    M   GI+P+  +Y
Sbjct: 579 QMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY 638

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           T L+         EE + L+ +M+   + PD+ T++  +  L
Sbjct: 639 TILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 151/308 (49%), Gaps = 1/308 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M + G+ P  V YN+ +     EG V+ AL +LS+M ++   P+  TY++L  GL + G 
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++QA  L  ++L   +   AY+YN LIN  C+      A  L+  M+ R   P + TY T
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ-RI 528
           L+ G CK   + G    + +M K +  P++V +NS++ G C+   +  A  L    + R 
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
            +   ITYNTLI+G  + G +  A  +  EM + G+  +   Y IL+N   K G    AR
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                M+  G+ PD   Y T +    K         + ++M+ +G  PD  TYN  +  L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 649 LGEKSAED 656
             + + E+
Sbjct: 506 CQQGNFEE 513



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 190/414 (45%), Gaps = 41/414 (9%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    Q G    A+D+++++  +    ++  +N  +  L K  ++      + +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +   +  ++ +FN ++Y  C+   + EA  L+  +    + P V+ +N +I+  C  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI------------RYA- 314
           + AL+L ++M   +   + P+  T+  ++NG  KLG V  A               R+A 
Sbjct: 407 DAALRLKKEM---TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 315 ----------------------MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
                                 M+ AG   +V TY   +    + G+ EEA  L + MV 
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            GL+P++V Y S I+     G +  A  V ++M+ K + P   TY++L         +  
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF   +++LE+ +  +  +YN +IN LC +  +  A +    M  +G++P+  +Y  LI+
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK---SLLQ 523
             C  G  E A+++Y  M   + +P+   ++  +  L +D  + A +   SL+Q
Sbjct: 644 ESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 697



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 144/310 (46%), Gaps = 4/310 (1%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D+M++ GL+P+    N  +  L  E  +  A  V   M    I P   TY+ +    C+ 
Sbjct: 169 DKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKE 228

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V QA +L +++ E     +  +YN+L+N L K   L  AK L+  M+  GL     TY
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI+G+C+ G    A  + E M      P L  YN+++ GLCK   +   +       +
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLK 348

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
                D +++N+L+ GY   G I+EAF +F E++   +    + YN LI+ LC +G    
Sbjct: 349 SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDA 408

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  L K M   G+ PD  TYT LV    K           ++M+  G+ PD   YN  I 
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI- 467

Query: 647 PLLGEKSAED 656
             +GE    D
Sbjct: 468 --VGEMKIAD 475



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 172/360 (47%), Gaps = 7/360 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K TP +  F++L+    + G    A+ +  +LK +    ++  +N  +  L     +   
Sbjct: 350 KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAA 409

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +L KEM   G   ++ T+ +++    K   +  A   +  ML  G+ P+   +N  I  
Sbjct: 410 LRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             ++ D   A  +  +M + +G    P+ +T+N  ++  C+ G  E A ++   M+  G+
Sbjct: 470 EMKIADTSVAFSMQEEM-LAAG--FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY ++I+G+ + G   +A  + +EM+ +G+ P+ V Y   IH   A+  ++ A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
             S M++K +  +  TY+ +  GLC    + +A+K  +++ E+ ++ + +SY ILIN  C
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNL 499
                  A +L   M+ R + PD  T+   +    +   +  AVQ  E++ + VE   N+
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQNVEDNINV 705


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 255/535 (47%), Gaps = 28/535 (5%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C+     +  L+      G    A+D+I+++ + G   + H     +  L  +     
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            W+L+ +M + G   NV T+  +I  LC    L+ A+ L++RM + G++PN V +N +IN
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              +   +++A   F  + +M  +   PN VT+N +I G+C LG  + A  +   M++ G
Sbjct: 399 ILVENRRIKYA---FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              N+ TY T+I GY   G++  ALR+ D M   G  P+   Y   I        +E A 
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + ++M+D  +CP+  TY+ L  G C++  +  A  L   +       +  +YN+LI+ L
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K NN + A++L   MI  G+ P+++TY  +IDG CK G+   A++++  M +    PNL
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y+S+I  L ++  ++ A++L    +R GL+ D ITY  +I  Y ++GK+  AF     
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 559 MRNVGIAVNKVGYNILINFL--------------------CKFGCYQQARELMKVMI--L 596
           M   G       Y +LI  L                    C FG     ++ + VM   L
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 755

Query: 597 HGIIP--DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             + P         LV+  S      E  EL   M+  G+ PD + YN+++  LL
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 248/506 (49%), Gaps = 4/506 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+++C    A       +  L   G  + + A++  L HL +L         Y  M+S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              N+  +N VI ALCK+  + +A ++  ++ +S + P+   +  +I   C+  DL+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++F +M   + +   PN+VT++ +ING C  GRV  A ++   MI  GI     T    I
Sbjct: 271 QVFNQM---AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A RL  +M  +G  PN   Y + I  L   G ++ A+ +   M    + 
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVF 387

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ L   L  N  +K AF + N +       +  +YN +I   C   +   A  +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +++M+ RG   +++TY T+I GYC  GN   A+++ + M+    KP+   Y  +I G CK
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
            + +++A  L       GL  + +TY  LI+GY  + K+  A ++   M+  G   N   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN+LI+ L K   +  A EL KVMI  GI P+ VTYT ++    KN S    +E+ + M+
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G  P+  TY+++I  L  E   E+
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEE 653



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 237/499 (47%), Gaps = 4/499 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + AL+   +++G T    D   ++  +G   ++  +N  ++ L K   +     + K++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  +  T+  +I   C++  L+ AL ++ +M K G  PN V ++ +IN  C  G +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L R+M ++ G  +LP + T    I   C +G  E A  +   M   G + NV TY
Sbjct: 302 NEAFDLIREM-ILHG--ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G    G  + A+ L   M + G+ PN V YN+ I+ L     ++ A  VL+ M  
Sbjct: 359 TALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P+  TY+ + KG C  G  K+A  + N +L+     +  +YN +I   C S N  +
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A ++L  M   G  PD  +Y  LI G+CK   +E A  ++  M      PN V Y ++I+
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CKD  LD A SLL+  +R G    + TYN LI+G       + A  +   M   GI  
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V Y  +I+ LCK G    A E+   MI  G +P+ +TY++L+    +    EE   L 
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658

Query: 627 DDMVLSGVSPDNQTYNAII 645
            ++   G+ PD  TY  +I
Sbjct: 659 AELERHGLIPDEITYVKMI 677



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 222/529 (41%), Gaps = 63/529 (11%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     + AL+      G  + A  +  ++   G   +   +N  ++ LV+   I   +
Sbjct: 351 CEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +   M   G   N+ T+N +I   C     ++A+ +   ML+ G   N+V +N II   
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G+   AL++   + +M      P+  ++  +I GFCK+ ++E A  +   M+  G+ 
Sbjct: 471 CDSGNTTSALRI---LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY  LIDGY +    + A  L + M + G  PN   YN  IH L  + +  GA  +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI++ I P+  TY+ +  GLC+NG    A ++ N+++E+  + +  +Y+ LI  L +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A+ L + +   GLIPD ITY  +I+ Y   G +E A      M K   +P L  
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 502 YNSIINGL-------------------------------------CKDASLDAAKSL--- 521
           Y  +I GL                                      K A LD   S+   
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 522 -------------LQASQRIGLL-------DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
                         +A++ +G +       D   YN+L+        +  A  +F  M  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            G  V+  GY  LI  LC+    ++AR   + M++    PD V    L+
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 228/523 (43%), Gaps = 61/523 (11%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL----- 129
           K+A+  +  +  +  F +++  + A++++LV  RR   A +++ NLM  N  SP      
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYN-ALINILVENRRIKYAFVVL-NLMGRNGCSPNIVTYN 429

Query: 130 EFLEG---LLDSYEIC-----------KATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           E ++G   L D  +              A    ++ +++     G T  A  ++  ++  
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G      ++   +    K++++   + L+ EMV  G   N  T+  +I   CK+ KL+ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
            SL   M +SG  PNV  +N++I+   +  +   A +L +   VM  + + PN VT+  +
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK---VMIEEGIFPNVVTYTAM 606

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK G    A E+   MI+ G   N+ TY++LI    + G  EEA  L  E+ + GL
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+ + Y   I      G VE A   L  MI     P  +TY +L KGL      K  + 
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYL 720

Query: 416 LHNQVLE-------------EHMVGDAYS-----------------YNILINYLCKSNNL 445
           L +Q L              +    DA S                  N L++ L  +   
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +LL SMI +GL PD   Y +L+    +  N++ A+ V+++M     + +L  Y  +
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 506 INGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFING 547
           I  LC+      A+   +    R    D +    LI+G   +G
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 177/445 (39%), Gaps = 72/445 (16%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           S N+ S L  L+ + D    CK     +  L+    +I   E A+ +  ++   G   + 
Sbjct: 473 SGNTTSALRILDLMRDGG--CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             +   +    K  ++     L + M   G   NV T+N++I+ L K+     A  L   
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ GI+PNVV +  +I+  C+ G    AL++F KM +  G   LPN +T++ +I    +
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM-IEQG--CLPNLLTYSSLIRALGQ 647

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN--- 358
            G+VE AE +   + + G+  +  TY  +I+ Y   G  E A      M+K G  P    
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 359 -----------------------NVVYNSTIHWLFAEGD-------------------VE 376
                                  +VV N +  +   + D                   V+
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 377 GALF--------------VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA---FK-LHN 418
            AL               +L  MI + +CPD   Y+ L   L R   V  A   FK +  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           Q  E H+ G    Y  LI  LC+ +    A+    +M++R   PD +    LIDG  + G
Sbjct: 828 QGCEVHLNG----YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYN 503
             +  ++    M+     P+  IY 
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYT 908


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 254/512 (49%), Gaps = 22/512 (4%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           L +  ++SPL  L  L        ATP++   L+ A         +  +  +LK     +
Sbjct: 31  LSADPALSPLAVLPHL-------AATPSLPHLLLTASVAGRPHTTSLSLYSRLKSLSLPI 83

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
              + +  LS L        F  +++  +      +  TFN+++  LC   K   AL L 
Sbjct: 84  PTASLHPLLSSLPPAPAFVLFADIFRLRLPL----STTTFNIMLRHLCTAGKPVRALELL 139

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M      PN V +N +I   C  G ++  +++ R+M    G  + P+  T+  +I+G+
Sbjct: 140 RQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGG--IAPDKYTYATVISGW 193

Query: 300 CKLGRVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           CK+G+VE A ++   M+  G ++ N   Y  LI GY   G+ E ALR   EMV RG+   
Sbjct: 194 CKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMT 253

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
              YN  +H LF EG    A  ++ +M +K + PD FTY+IL  G C+ G  K+A K+  
Sbjct: 254 VATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFE 313

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            ++ + +     +Y  LI+ L     +    +L +  + RG+ PD+  Y  LI+ +C GG
Sbjct: 314 VMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGG 373

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYN 537
           +++ A ++   M+K    P+ V YN+++ GLC    LD A+ L++   + G+  D ++YN
Sbjct: 374 DMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYN 433

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLI+GY + G I +A  +  EM   G     + YN +I  LC  G    A +L+K M+ +
Sbjct: 434 TLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGN 493

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           GI PD  TY +L+   +   + +E +   DD+
Sbjct: 494 GITPDDSTYISLIEGLT---TEDERLAAGDDV 522



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 220/432 (50%), Gaps = 10/432 (2%)

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           ++ L        A  L+  + +  +  +   FN+++   C  G    AL+L R+M     
Sbjct: 88  LHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS--- 144

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSE 341
               PN+VT+N +I GFC  GRV+   EI   M  + GI  +  TYAT+I G+ + G  E
Sbjct: 145 ----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVE 200

Query: 342 EALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +A ++ DEM+  G + PN V+YN+ I     +G++E AL    +M+D+ +     TY++ 
Sbjct: 201 DATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLF 260

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              L   G   +A  L  ++ E+ +  DA++YNILIN  CK      A ++   M+ +G+
Sbjct: 261 VHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGI 320

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
              ++TY +LI      G ++   +++ +  +   +P+L +YN++IN  C    +D A  
Sbjct: 321 RATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFE 380

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           ++   ++  +  D +TYNTL+ G  + G++ EA  +  EM   GI  + V YN LI+   
Sbjct: 381 IMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYS 440

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G  + A ++   M+  G  P  +TY  ++     N    +  +L  +MV +G++PD+ 
Sbjct: 441 MKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDS 500

Query: 640 TYNAIISPLLGE 651
           TY ++I  L  E
Sbjct: 501 TYISLIEGLTTE 512



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 11/291 (3%)

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +  +++H L +      A  + +D+    +     T++I+ + LC  G   +A +L  Q+
Sbjct: 83  IPTASLHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQM 142

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI-PDIITYGTLIDGYCKGGN 479
                  +A +YN +I   C    + A  +++  M  RG I PD  TY T+I G+CK G 
Sbjct: 143 PSP----NAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGK 198

Query: 480 IEGAVQVYENM---KKVEKKPNLVIYNSIINGLCKDASLDAA-KSLLQASQRIGLLDAIT 535
           +E A +V++ M    KVE  PN V+YN++I G C   +L+ A +   +   R   +   T
Sbjct: 199 VEDATKVFDEMLTEGKVE--PNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVAT 256

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           YN  ++  F+ G+ AEA A+  EM   G+A +   YNILIN  CK G  ++A ++ +VM+
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             GI    VTYT+L+   S     +E   L +D V  G+ PD   YNA+I+
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALIN 367



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 186/422 (44%), Gaps = 23/422 (5%)

Query: 30  STEDIVFRAICVNLRQ-RKWKILEQMAPSLTNSLVNRVVSEF--RKSPKLALEFYTWVGE 86
           +T +I+ R +C   +  R  ++L QM PS      N V++ F  R   +  +E    + E
Sbjct: 117 TTFNIMLRHLCTAGKPVRALELLRQM-PSPNAVTYNTVIAGFCARGRVQAGIEIMREMRE 175

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
               +    +   ++       + +DA  +   +++   V P                  
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEP----------------NA 219

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +++AL+      G  E A     ++  +G S+++  +N F+  L           L +E
Sbjct: 220 VMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEE 279

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   +  T+N++I   CKE K ++A+ ++  M+  GI   VV +  +I+     G 
Sbjct: 280 MGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGM 339

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++   +LF    V  G  + P+   +N +IN  C  G ++ A EI   M K  I  +  T
Sbjct: 340 VQETDRLFND-AVRRG--IRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVT 396

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+ G    G  +EA  L +EM KRG+ P+ V YN+ I     +GD++ A+ V  +M+
Sbjct: 397 YNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMM 456

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K   P   TY+ + KGLC NG    A  L  +++   +  D  +Y  LI  L   +   
Sbjct: 457 GKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERL 516

Query: 447 AA 448
           AA
Sbjct: 517 AA 518



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 5/157 (3%)

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +N ++  LC       A  LL+   ++   +A+TYNT+I G+   G++     +  EMR 
Sbjct: 119 FNIMLRHLCTAGKPVRALELLR---QMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRE 175

Query: 562 VG-IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII-PDYVTYTTLVTRFSKNCSP 619
            G IA +K  Y  +I+  CK G  + A ++   M+  G + P+ V Y  L+  +    + 
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL 235

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           E  +    +MV  GVS    TYN  +  L  E  A +
Sbjct: 236 EVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAE 272


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 255/535 (47%), Gaps = 28/535 (5%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C+     +  L+      G    A+D+I+++ + G   + H     +  L  +     
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            W+L+ +M + G   NV T+  +I  LC    L+ A+ L++RM + G++PN V +N +IN
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              +   +++A   F  + +M  +   PN VT+N +I G+C LG  + A  +   M++ G
Sbjct: 399 ILVENRRIKYA---FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              N+ TY T+I GY   G++  ALR+ D M   G  P+   Y   I        +E A 
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + ++M+D  +CP+  TY+ L  G C++  +  A  L   +       +  +YN+LI+ L
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K NN + A++L   MI  G+ P+++TY  +IDG CK G+   A++++  M +    PNL
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y+S+I  L ++  ++ A++L    +R GL+ D ITY  +I  Y ++GK+  AF     
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 559 MRNVGIAVNKVGYNILINFL--------------------CKFGCYQQARELMKVMI--L 596
           M   G       Y +LI  L                    C FG     ++ + VM   L
Sbjct: 696 MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 755

Query: 597 HGIIP--DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             + P         LV+  S      E  EL   M+  G+ PD + YN+++  LL
Sbjct: 756 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 248/506 (49%), Gaps = 4/506 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+++C    A       +  L   G  + + A++  L HL +L         Y  M+S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              N+  +N VI ALCK+  + +A ++  ++ +S + P+   +  +I   C+  DL+ AL
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++F +M   + +   PN+VT++ +ING C  GRV  A ++   MI  GI     T    I
Sbjct: 271 QVFNQM---AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A RL  +M  +G  PN   Y + I  L   G ++ A+ +   M    + 
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ L   L  N  +K AF + N +       +  +YN +I   C   +   A  +
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +++M+ RG   +++TY T+I GYC  GN   A+++ + M+    KP+   Y  +I G CK
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
            + +++A  L       GL  + +TY  LI+GY  + K+  A ++   M+  G   N   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN+LI+ L K   +  A EL KVMI  GI P+ VTYT ++    KN S    +E+ + M+
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G  P+  TY+++I  L  E   E+
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEE 653



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 237/499 (47%), Gaps = 4/499 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + AL+   +++G T    D   ++  +G   ++  +N  ++ L K   +     + K++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  +  T+  +I   C++  L+ AL ++ +M K G  PN V ++ +IN  C  G +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L R+M ++ G  +LP + T    I   C +G  E A  +   M   G + NV TY
Sbjct: 302 NEAFDLIREM-ILHG--ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G    G  + A+ L   M + G+ PN V YN+ I+ L     ++ A  VL+ M  
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P+  TY+ + KG C  G  K+A  + N +L+     +  +YN +I   C S N  +
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A ++L  M   G  PD  +Y  LI G+CK   +E A  ++  M      PN V Y ++I+
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CKD  LD A SLL+  +R G    + TYN LI+G       + A  +   M   GI  
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V Y  +I+ LCK G    A E+   MI  G +P+ +TY++L+    +    EE   L 
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658

Query: 627 DDMVLSGVSPDNQTYNAII 645
            ++   G+ PD  TY  +I
Sbjct: 659 AELERHGLIPDEITYVKMI 677



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 222/529 (41%), Gaps = 63/529 (11%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     + AL+      G  + A  +  ++   G   +   +N  ++ LV+   I   +
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +   M   G   N+ T+N +I   C     ++A+ +   ML+ G   N+V +N II   
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G+   AL++   + +M      P+  ++  +I GFCK+ ++E A  +   M+  G+ 
Sbjct: 471 CDSGNTTSALRI---LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 527

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY  LIDGY +    + A  L + M + G  PN   YN  IH L  + +  GA  +
Sbjct: 528 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 587

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI++ I P+  TY+ +  GLC+NG    A ++ N+++E+  + +  +Y+ LI  L +
Sbjct: 588 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 647

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A+ L + +   GLIPD ITY  +I+ Y   G +E A      M K   +P L  
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 502 YNSIINGL-------------------------------------CKDASLDAAKSL--- 521
           Y  +I GL                                      K A LD   S+   
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 522 -------------LQASQRIGLL-------DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
                         +A++ +G +       D   YN+L+        +  A  +F  M  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            G  V+  GY  LI  LC+    ++AR   + M++    PD V    L+
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 228/523 (43%), Gaps = 61/523 (11%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL----- 129
           K+A+  +  +  +  F +++  + A++++LV  RR   A +++ NLM  N  SP      
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYN-ALINILVENRRIKYAFVVL-NLMGRNGCSPNIVTYN 429

Query: 130 EFLEG---LLDSYEIC-----------KATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           E ++G   L D  +              A    ++ +++     G T  A  ++  ++  
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G      ++   +    K++++   + L+ EMV  G   N  T+  +I   CK+ KL+ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
            SL   M +SG  PNV  +N++I+   +  +   A +L +   VM  + + PN VT+  +
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK---VMIEEGIFPNVVTYTAM 606

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK G    A E+   MI+ G   N+ TY++LI    + G  EEA  L  E+ + GL
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+ + Y   I      G VE A   L  MI     P  +TY +L KGL      K  + 
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYL 720

Query: 416 LHNQVLE-------------EHMVGDAYS-----------------YNILINYLCKSNNL 445
           L +Q L              +    DA S                  N L++ L  +   
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +LL SMI +GL PD   Y +L+    +  N++ A+ V+++M     + +L  Y  +
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840

Query: 506 INGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFING 547
           I  LC+      A+   +    R    D +    LI+G   +G
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 177/445 (39%), Gaps = 72/445 (16%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           S N+ S L  L+ + D    CK     +  L+    +I   E A+ +  ++   G   + 
Sbjct: 473 SGNTTSALRILDLMRDGG--CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             +   +    K  ++     L + M   G   NV T+N++I+ L K+     A  L   
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ GI+PNVV +  +I+  C+ G    AL++F KM +  G   LPN +T++ +I    +
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM-IEQG--CLPNLLTYSSLIRALGQ 647

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN--- 358
            G+VE AE +   + + G+  +  TY  +I+ Y   G  E A      M+K G  P    
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707

Query: 359 -----------------------NVVYNSTIHWLFAEGD-------------------VE 376
                                  +VV N +  +   + D                   V+
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767

Query: 377 GALF--------------VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA---FK-LHN 418
            AL               +L  MI + +CPD   Y+ L   L R   V  A   FK +  
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           Q  E H+ G    Y  LI  LC+ +    A+    +M++R   PD +    LIDG  + G
Sbjct: 828 QGCEVHLNG----YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYN 503
             +  ++    M+     P+  IY 
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYT 908


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 176/642 (27%), Positives = 292/642 (45%), Gaps = 40/642 (6%)

Query: 32  EDIVFRAICVNLRQRKWK------ILEQMAPSLTNS-LVNRVVSEFRKSPKLALEFYTWV 84
            D++F  I    +++ W       + +Q    +T+  L  RV+   R  P++AL F+ WV
Sbjct: 54  RDLIFDTI----KEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWV 109

Query: 85  GENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL------------ 132
                F  S    CAI+ +LV       A  +M  ++S      ++ L            
Sbjct: 110 MAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFD 169

Query: 133 ----EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
                GLL   + C     V    +R    +   +  Y ++++  +K   V+   +N  L
Sbjct: 170 KMIRNGLLPDVKNCNRILRV----LRDENLLSKAKNVYGMMEQFGIKPTVVT---YNTML 222

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               K   + +  +L  EM   G   N  T+N+++  L K+ +LE+A  L   ML SG+ 
Sbjct: 223 DSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
            +   +N +IN  CQ G    A  L  +M         P   T+N ++ G CK  +V   
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEM---VNRRAFPTLSTYNTLMYGLCKWVQVT-G 338

Query: 309 EEIRYA-MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
             +R++ M+K+    ++ ++ +L+ GY R G   EA  L DE+  R L+P  + YN+ IH
Sbjct: 339 VRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIH 398

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G ++ AL +  +M D+ + PD FTY+IL  G  + G V  A    N++L + +  
Sbjct: 399 GLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKP 458

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D ++YN  I    K  + + A  +   M+  G  PD+ITY   +   C+ GN E A  + 
Sbjct: 459 DRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLL 518

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFIN 546
           ENM      P+ V Y SIING  K+  L  A+ +       G+  ++ TY  LI+ +   
Sbjct: 519 ENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAK 578

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
             +  AF  FS+M    +  N + YN +IN LC      +A +    M   GI+P+  +Y
Sbjct: 579 QMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY 638

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           T L+         EE + L+ +M+   + PD+ T++  +  L
Sbjct: 639 TILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 151/308 (49%), Gaps = 1/308 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M + G+ P  V YN+ +     EG V+ AL +LS+M ++   P+  TY++L  GL + G 
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++QA  L  ++L   +   AY+YN LIN  C+      A  L+  M+ R   P + TY T
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ-RI 528
           L+ G CK   + G    + +M K +  P++V +NS++ G C+   +  A  L    + R 
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
            +   ITYNTLI+G  + G +  A  +  EM + G+  +   Y IL+N   K G    AR
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                M+  G+ PD   Y T +    K         + ++M+ +G  PD  TYN  +  L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505

Query: 649 LGEKSAED 656
             + + E+
Sbjct: 506 CQQGNFEE 513



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 190/413 (46%), Gaps = 41/413 (9%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ L+    Q G    A+D+++++  +    ++  +N  +  L K  ++      + +M+
Sbjct: 288 YNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDML 347

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
              +  ++ +FN ++Y  C+   + EA  L+  +    + P V+ +N +I+  C  G L+
Sbjct: 348 KSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLD 407

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI------------RYA-- 314
            AL+L ++M   +   + P+  T+  ++NG  KLG V  A               R+A  
Sbjct: 408 AALRLKKEM---TDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 315 ---------------------MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
                                M+ AG   +V TY   +    + G+ EEA  L + MV  
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           GL+P++V Y S I+     G +  A  V ++M+ K + P   TY++L         +  A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F   +++LE+ +  +  +YN +IN LC +  +  A +    M  +G++P+  +Y  LI+ 
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINE 644

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK---SLLQ 523
            C  G  E A+++Y  M   + +P+   ++  +  L +D  + A +   SL+Q
Sbjct: 645 SCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 697



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 144/310 (46%), Gaps = 4/310 (1%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D+M++ GL+P+    N  +  L  E  +  A  V   M    I P   TY+ +    C+ 
Sbjct: 169 DKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKE 228

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V QA +L +++ E     +  +YN+L+N L K   L  AK L+  M+  GL     TY
Sbjct: 229 GRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTY 288

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI+G+C+ G    A  + E M      P L  YN+++ GLCK   +   +       +
Sbjct: 289 NPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLK 348

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
                D +++N+L+ GY   G I+EAF +F E++   +    + YN LI+ LC +G    
Sbjct: 349 SKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDA 408

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  L K M   G+ PD  TYT LV    K           ++M+  G+ PD   YN  I 
Sbjct: 409 ALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRI- 467

Query: 647 PLLGEKSAED 656
             +GE    D
Sbjct: 468 --VGEMKIAD 475



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 174/370 (47%), Gaps = 8/370 (2%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K TP +  F++L+    + G    A+ +  +LK +    ++  +N  +  L     +   
Sbjct: 350 KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAA 409

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +L KEM   G   ++ T+ +++    K   +  A   +  ML  G+ P+   +N  I  
Sbjct: 410 LRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             ++ D   A  +  +M         P+ +T+N  ++  C+ G  E A ++   M+  G+
Sbjct: 470 EMKIADTSVAFSMQEEM---LAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY ++I+G+ + G   +A  + +EM+ +G+ P+ V Y   IH   A+  ++ A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
             S M++K +  +  TY+ +  GLC    + +A+K  +++ E+ ++ + +SY ILIN  C
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNL 499
                  A +L   M+ R + PD  T+   +    +   +  AVQ  E++ + VE   N+
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQNVEDNINV 705

Query: 500 VIYNSIINGL 509
            I   +I GL
Sbjct: 706 RI-EMLIGGL 714


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 164/635 (25%), Positives = 289/635 (45%), Gaps = 43/635 (6%)

Query: 27  ANPSTEDIVFRAICVNLRQRKWKI---LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTW 83
            NP  E  +   I   L   KW+    L  ++P L    V  ++ +  K+    L F+ W
Sbjct: 44  TNPFPE--LVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNIL-QTHKNTDSVLRFFFW 100

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK 143
           +     F H +    ++++ LV  R F                +P + +  L+       
Sbjct: 101 ISRRKFFKHDMSCFVSMLNRLVRDRLF----------------APADHVRILM------- 137

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWK 202
                    +++C   G  +     + ++  K     ++ ++   L  L K + +     
Sbjct: 138 ---------IKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARD 188

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +Y +M++ G   ++ TFN +I  LCK+ +++EA  +   + +   +PN   +  +I   C
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +  +L+ A  +F +M     D   PNSVT++ +ING C  GR+E A ++   M++ GI+ 
Sbjct: 249 RNHNLDLAFAMFDRM---VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V TY   +      G S EA+ L  +M KRG +PN   + + I  L  +G  E A+ + 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+   + P   TY+ L   LC  G  + AF +   +L    +    +YN +I   C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++  A  +   M+  G  P++ITY TLI GYCK GN+  A+++ E MK    KP+   Y
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +I+G  +   L+ A SL       G+  + +TY  +I+GYF   K+ +A A+F +M  
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   +   YN++I+   K     +A      M+  G++P+ +TYT+ +    +N     
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             ++  +M      P+  TY+++I  L  E  AED
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED 640



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 246/517 (47%), Gaps = 6/517 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+      G  E A D+++++  KG   +++ +   L  L          
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L  +M   G V N+ TF  +I  L ++ K E A+ LY++ML  G+ P  V +N +IN+ 
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G  E A  +F+ M  +S  S LP++ T+N II  FC +G ++ A  I   M+KAG  
Sbjct: 388 CVEGRFETAFTIFKWM--LSHGS-LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY TLI GY + G+   A+RL + M   GL P+   Y   I      G +E A  +
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M++  I P+H TY+ +  G      V  A  L  +++E   +  + +YN++I+   K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +N+++ A+     M+ +GL+P++ITY + IDG C+ G    A +++  M+K    PNL  
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 502 YNSIINGLCKDASLDAAK--SLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
           Y+S+I GLC++   + A+  +LL      G    + TY TL+ G    G+  EA  +   
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M+  G+  ++  Y  L+   CK    + A  +   M   G       Y  L+    K   
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            EE   +   M+    + D   +  ++  LL E   +
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETD 781



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 214/496 (43%), Gaps = 79/496 (15%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++AL+      G  E A+ + + +   G   S   +N  +     + +I +   ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 205 KEMVSCGYVENVNTFNLVIYALCKEC---------------------------------- 230
            +M+  G   NV T+N +IY  CK+                                   
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 231 -KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            KLE A SL+Y M++ GI PN V +  II+    +  ++ AL LF KM V SG+  LP+S
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM-VESGN--LPSS 552

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+N +I+GF K   +  AE     M+K G+  NV TY + IDG  R G +  A ++  E
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGA-LFVLSDMIDKHIC-PDHFTYSILTKGLCRN 407
           M KR   PN   Y+S I+ L  EG  E A ++ L   +  + C P+  TY+ L KGLC  
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC-- 670

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
                              G+   Y               A QL+ SM  +GL P    Y
Sbjct: 671 -------------------GEGRCYE--------------ADQLVVSMQKKGLQPSEEIY 697

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-Q 526
             L+ G CK   +E A+ ++ +M  +  + +L  Y ++I  LCK+  ++ A+ + Q   +
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           +    D + +  L++G    G+      +   M +    +N   Y +L   L    C  +
Sbjct: 758 KHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIK 817

Query: 587 ARELMKVMILHGIIPD 602
             ++ + +   GI+ D
Sbjct: 818 IPQISQQL---GIVKD 830



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 153/352 (43%), Gaps = 12/352 (3%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           GNL   N++  LE ++G        K     +  L+   ++ G  E A  +   +   G 
Sbjct: 461 GNL--NNAMRLLEIMKG-----NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S +   +   +     L ++     L+ +MV  G + +  T+N++I    K   + EA +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
              +M+K G+ PNV+ +   I+  C+ G    A K+F +M      +  PN  T++ +I 
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM---EKRNYFPNLYTYSSLIY 630

Query: 298 GFCKLGRVEFAE--EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           G C+ GR E AE   +   +   G + NV TY TL+ G    G   EA +L   M K+GL
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGL 690

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+  +Y + +        VE AL +   M           Y  L   LC+   +++A  
Sbjct: 691 QPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQC 750

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           +   +LE+H   D  ++ +L++ L K        +LL  M  R    +  TY
Sbjct: 751 IFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/324 (21%), Positives = 138/324 (42%), Gaps = 22/324 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           AI+    N  + DDAL L   ++ + ++                  +   ++ ++   ++
Sbjct: 522 AIIDGYFNLAKVDDALALFWKMVESGNL-----------------PSSQTYNVMISGFSK 564

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
             +   A +   K+  +G   ++  + +F+  L +    G  +K++ EM    Y  N+ T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 219 FNLVIYALCKECKLEEA--LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
           ++ +IY LC+E + E+A   +L  R+   G  PNV  +  ++   C  G    A +L   
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M       + P+   +  ++ G CK  +VE A  I Y+M   G   ++  Y  LI    +
Sbjct: 685 M---QKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCK 741

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
               EEA  +   M+++    + V +   +  L  EG+ +  L +L  M  ++   +  T
Sbjct: 742 ENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801

Query: 397 YSILTKGLCRNGCVKQAFKLHNQV 420
           Y +L + L    C  +  ++  Q+
Sbjct: 802 YVMLARELSALDCAIKIPQISQQL 825


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 254/500 (50%), Gaps = 6/500 (1%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            TP +  F  L+    +I      + +  ++++ G S      N  L+ L  +N +G   
Sbjct: 92  PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGL 151

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +   ++  GY+ ++ T+  +I  LC E ++ +A  L+ RM K G  PN + +  ++   
Sbjct: 152 AVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGL 211

Query: 262 CQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           C+ G++  ALKL ++M     + G +  P  ++++ II+  CK  R + A ++   M   
Sbjct: 212 CRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ 271

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+   V +Y +LI G+  GG  EEA RL +EMV +G+ PN V +N  I  L  EG V  A
Sbjct: 272 GMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEA 331

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L  MI + I P+  TY+ L +G C  G +  A +L   +  +    D   Y +LIN 
Sbjct: 332 KDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLING 391

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            CK++ +  A +L + M+  G  PD+ TYG L+ G  +GG +  A +++  MK      +
Sbjct: 392 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGD 451

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           L IY   +NGLCK+  L  A  L    +   + LD   +N LI+G    GK+  A+ +F 
Sbjct: 452 LYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFE 511

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           ++    +  + V YNI+I+  C+ G   +A  L + M  +G  PD +TY TL+  F ++ 
Sbjct: 512 KLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESK 571

Query: 618 SPEEVIELHDDMVLSGVSPD 637
             E+V+EL   MV   VS D
Sbjct: 572 KLEKVVELLHMMVQRDVSLD 591



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 252/507 (49%), Gaps = 11/507 (2%)

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           I AT+ A+     +     +  + ++ + LS L K+    + + LY +M   G   +  T
Sbjct: 75  ITATQ-AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCT 133

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            N+++  LC   ++ E L++   +L+ G  P++V +  +I   C    +  A  LF +M 
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA----GIDCN--VRTYATLID 332
            +      PN++T+  ++ G C+ G +  A ++   M+      GI+    V +Y+ +ID
Sbjct: 194 KLG---CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              +    +EA  L +EM  +G+ P  + Y S IH     G  E A  + ++M+++ + P
Sbjct: 251 ALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQP 310

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  T+++L   LC+ G V +A  L   +++  +V +  +YN LI   C   +L +A++L 
Sbjct: 311 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 370

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
            SM  +G  PD+I Y  LI+GYCK   +E A+++Y  M +V K+P++  Y +++ GL + 
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQG 430

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  AK L    +  G+  D   Y   +NG   NG + EA  +F+++++  I ++   +
Sbjct: 431 GKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECF 490

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N LI+ LCK G  + A EL + +    + PD VTY  ++  F +     +   L   M  
Sbjct: 491 NCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 550

Query: 632 SGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +G +PD  TY  +I      K  E  V
Sbjct: 551 NGCTPDKITYATLIRGFFESKKLEKVV 577



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 153/335 (45%), Gaps = 38/335 (11%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A D+ +++KV+G + ++ ++ + +       +     +L+ EMV+ G   NV TFN++I 
Sbjct: 261 ARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID 320

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCKE K+ EA  L   M++ GI PN++ +N +I   C VGDL  A +LF  M       
Sbjct: 321 VLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM---PSKG 377

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P+ + +  +ING+CK  +VE A ++   M++ G   +V+TY  L+ G  +GG   +A 
Sbjct: 378 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 437

Query: 345 RLCDEMVKRGLMPNNVVY-----------------------------------NSTIHWL 369
           +L   M   G+  +  +Y                                   N  I  L
Sbjct: 438 KLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 497

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G +E A  +   +  + + PD  TY+I+    CR G V +A  L  ++ +     D 
Sbjct: 498 CKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDK 557

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            +Y  LI    +S  L    +LL  M+ R +  D+
Sbjct: 558 ITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 253/491 (51%), Gaps = 11/491 (2%)

Query: 125 SVSPLEFLEGLLDSYEICKATPA-VFDALVRACTQI-GATEGAYDVIQKLKVKGHSVSIH 182
           S  PL  L   L +  +  ++P   FD+L+++   +      A   +   +  G+  S+ 
Sbjct: 58  SFPPLPLLVCFLRALRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVL 117

Query: 183 AWNNFLSHL--VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           A+N  L  L    L    RF   +  M+S G   NV T+N++I ALC     +EALS+  
Sbjct: 118 AYNAVLLALSDASLTSARRF---FDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILR 174

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M  +G  PNVV +N ++    + G+++ A +L   +G+M    + PN VT N ++NG C
Sbjct: 175 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL---VGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G++E A ++   M++ G+  +  +Y TL+ GY + G S EAL +  EM ++G+MP+ V
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            + S IH +   G++E A+ ++  M ++ +  +  T++ L  G C+ G +  A      +
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            +  +      YN LIN  C    +  A++LL  M  +GL PD++TY T+I  YCK  + 
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
             A ++ + M +    P+ + Y+S+I  LC++  L  A  L +   ++GL  D  TY +L
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G+   G +  A ++  +M   G+  + V Y++LIN L K     +A++L+  +     
Sbjct: 472 IDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531

Query: 600 IPDYVTYTTLV 610
           IP    Y  L+
Sbjct: 532 IPANTKYDALM 542



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/411 (34%), Positives = 215/411 (52%), Gaps = 7/411 (1%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+V+ +N ++  A     L  A + F  M     D V PN  T+N +I   C  G  
Sbjct: 111 GYVPSVLAYNAVL-LALSDASLTSARRFFDSM---LSDGVAPNVYTYNILIRALCGRGHR 166

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + A  I   M  AG   NV TY TL+  + R G  + A RL   M+  GL PN V +NS 
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM 226

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++ +   G +E A  V  +M+ + + PD  +Y+ L  G C+ GC  +A  +  ++ ++ +
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
           + D  ++  LI+ +CK+ NL  A  L+  M  RGL  + +T+  LIDG+CK G ++ A+ 
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
               M++   KP++V YN++ING C    +D A+ LL   +  GL  D +TY+T+I+ Y 
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            N     AF +  +M   G+  + + Y+ LI  LC+      A  L K MI  G+ PD  
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           TYT+L+    K  + E  + LHD MV +GV PD  TY+ +I+ L   KSA 
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL--SKSAR 515



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 249/485 (51%), Gaps = 19/485 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+RA    G  + A  +++ ++  G   ++  +N  ++   +  E+    +L   M
Sbjct: 152 TYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 211

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N+ TFN ++  +CK  K+E+A  ++  M++ G+ P+ V +N ++   C+ G  
Sbjct: 212 LDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +F +M   +   ++P+ VT   +I+  CK G +E+A  +   M + G+  N  T+
Sbjct: 272 HEALSVFAEM---TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTF 328

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LIDG+ + G  ++AL     M +  + P+ V YN+ I+     G ++ A  +L +M  
Sbjct: 329 TALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA 388

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + PD  TYS +    C+N     AF+L+ Q+LE+ ++ DA +Y+ LI  LC+   L+ 
Sbjct: 389 KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  +MI  GL PD  TY +LIDG+CK GN+E A+ +++ M K    P++V Y+ +IN
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508

Query: 508 GLCKDA-SLDAAKSLLQASQRIGLLDAITYNTLIN---------------GYFINGKIAE 551
           GL K A +++A + L +      +     Y+ L++               G+ + G + E
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  ++  M +    ++   Y++LI+  C+ G   +A    K M+  G  P+  +  +L+ 
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIR 628

Query: 612 RFSKN 616
              +N
Sbjct: 629 GLFEN 633



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 244/508 (48%), Gaps = 48/508 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ LV A  + G  +GA  ++  +   G   ++  +N+ ++ + K  ++    
Sbjct: 181 CGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDAR 240

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++ EM+  G   +  ++N ++   CK     EALS++  M + GI P+VV F  +I+  
Sbjct: 241 KVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 300

Query: 262 CQVGDLEFALKLFRKM-------------GVMSG--------DSVL-----------PNS 289
           C+ G+LE+A+ L R+M              ++ G        D++L           P+ 
Sbjct: 301 CKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSV 360

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           V +N +ING+C +GR++ A E+ + M   G+  +V TY+T+I  Y +   +  A  L  +
Sbjct: 361 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQ 420

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+++G++P+ + Y+S I  L  E  +  A  +  +MI   + PD FTY+ L  G C+ G 
Sbjct: 421 MLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 480

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG- 468
           V++A  LH+++++  ++ D  +Y++LIN L KS     A+QLL  +     IP    Y  
Sbjct: 481 VERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDA 540

Query: 469 --------------TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
                          L+ G+C  G +  A +VY++M       +  +Y+ +I+G C+  +
Sbjct: 541 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 600

Query: 515 LDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  A S   Q  QR    ++ +  +LI G F NG + EA  +  ++ N     +      
Sbjct: 601 VMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKA 660

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIP 601
           LI+     G      +++  M   G++P
Sbjct: 661 LIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 168/320 (52%), Gaps = 1/320 (0%)

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            S   A R  D M+  G+ PN   YN  I  L   G  + AL +L DM      P+  TY
Sbjct: 129 ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTY 188

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L     R G V  A +L   +L+  +  +  ++N ++N +CK+  +  A+++   M+ 
Sbjct: 189 NTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMR 248

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL PD ++Y TL+ GYCK G    A+ V+  M +    P++V + S+I+ +CK  +L+ 
Sbjct: 249 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEW 308

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A +L++  +  GL ++ +T+  LI+G+   G + +A      MR   I  + V YN LIN
Sbjct: 309 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALIN 368

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C  G   +AREL+  M   G+ PD VTY+T+++ + KNC      EL+  M+  GV P
Sbjct: 369 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 428

Query: 637 DNQTYNAIISPLLGEKSAED 656
           D  TY+++I  L  EK   D
Sbjct: 429 DAITYSSLIRVLCEEKRLSD 448



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + YN ++     +  +  A   F  M + G+A N   YNILI  LC  G  ++A  +++ 
Sbjct: 117 LAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRD 175

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M   G  P+ VTY TLV  F +    +    L   M+  G+ P+  T+N++++ +     
Sbjct: 176 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGK 235

Query: 654 AED 656
            ED
Sbjct: 236 MED 238


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 232/448 (51%), Gaps = 5/448 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L +++ + G    + T+N ++  LCK  +LEEA+ L  +++ +G  P+VV +  +I+   
Sbjct: 8   LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +      A KLF++M +     +  ++V +  +I    + G++  A  +   M   G   
Sbjct: 68  KEKRSFEAYKLFKEMALRG---LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 124

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V T +T+IDG ++ G    A+R+   M  RGL PN VVY++ IH L     ++ AL +L
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 184

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           + M      PD  TY++L  GLC++G V+ A    +++LE     D Y+YNILI+  CK+
Sbjct: 185 AQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKA 244

Query: 443 NNL-AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            N  AA+  L     + G   DI TY  ++D   K   IE AV + E +      P +  
Sbjct: 245 GNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT 304

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN+++NGLCK   L+ A  LL+     G   D +TY +LI+G     +  EA+ +F EM 
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+A++ V Y  LI  L + G   QA  + K M  HG +PD VT +T++   SK     
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 424

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + +   M   G++P+   Y+A+I  L
Sbjct: 425 AAVRIFKSMEARGLAPNEVVYSALIHGL 452



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 237/501 (47%), Gaps = 38/501 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + AL+R   Q G    A  V + +   G    +   +  +  L K   IG   +++K M 
Sbjct: 94  YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 153

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   N   ++ +I+ LCK  K++ AL +  +M K+   P+ + +N++I+  C+ GD+E
Sbjct: 154 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVE 213

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE-EIRYAMIKAGIDCNVRTY 327
            A   F +M + +G    P+  T+N +I+GFCK G  + A   +       G   ++ TY
Sbjct: 214 AARAFFDEM-LEAG--CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTY 270

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++D  A+    EEA+ L +++   G  P    YN+ ++ L   G +E A+ +L  ++D
Sbjct: 271 TAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  TY+ L  GL +     +A+KL  ++    +  D   Y  LI  L ++  +  
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 390

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +  +M   G +PD++T  T+IDG  K G I  AV+++++M+     PN V+Y+++I+
Sbjct: 391 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           GLCK   +D A                                    M ++M+      +
Sbjct: 451 GLCKARKMDCA----------------------------------LEMLAQMKKAFCTPD 476

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + YNILI+ LCK G  + AR     M+  G  PD  TY  L++ F K  + +    + D
Sbjct: 477 TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 536

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           DM  S  S +  TY A+IS L
Sbjct: 537 DMSSSRCSANVVTYGALISGL 557



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 242/507 (47%), Gaps = 5/507 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T A ++AL+    ++G  E A D+++K+   G +  +  + + +  L K       +
Sbjct: 17  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 76

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL+KEM   G   +   +  +I  L +  K+ +A S+Y  M   G  P+VV  + +I+  
Sbjct: 77  KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 136

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G +  A+++F+ M       + PN V ++ +I+G CK  +++ A E+   M KA   
Sbjct: 137 SKAGRIGAAVRIFKSM---EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 193

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY  LIDG  + G  E A    DEM++ G  P+   YN  I      G+ + A   
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHS 253

Query: 382 LSDMIDKHICP-DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           L+     + C  D  TY+ +   L +N  +++A  L  ++          +YN L+N LC
Sbjct: 254 LAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLC 313

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   L  A  LL  ++  G  PD++TY +LIDG  K      A ++++ M       + V
Sbjct: 314 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 373

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y ++I  L +   +  A S+ +     G + D +T +T+I+G    G+I  A  +F  M
Sbjct: 374 CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 433

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G+A N+V Y+ LI+ LCK      A E++  M      PD +TY  L+    K+   
Sbjct: 434 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 493

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIIS 646
           E      D+M+ +G  PD  TYN +IS
Sbjct: 494 EAARAFFDEMLEAGCKPDVYTYNILIS 520



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 197/385 (51%), Gaps = 5/385 (1%)

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A+ L  K+   + +   P   T+N ++NG CK+GR+E A ++   ++  G   +V T
Sbjct: 2   IEEAVALMEKI---TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 58

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LIDG  +   S EA +L  EM  RGL  + V Y + I  L   G +  A  V   M 
Sbjct: 59  YTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 118

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                PD  T S +  GL + G +  A ++   +    +  +   Y+ LI+ LCK+  + 
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 178

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++L+ M      PD ITY  LIDG CK G++E A   ++ M +   KP++  YN +I
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238

Query: 507 NGLCKDASLDAAK-SLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           +G CK  + DAA  SL Q +   G  +D  TY  +++    N KI EA A+  ++   G 
Sbjct: 239 SGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
                 YN L+N LCK G  ++A +L++ ++ +G  PD VTYT+L+    K     E  +
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 358

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLL 649
           L  +M L G++ D   Y A+I  LL
Sbjct: 359 LFKEMALRGLALDTVCYTALIRELL 383



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 217/488 (44%), Gaps = 49/488 (10%)

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
           LL  G +  A+SV       G       C         ++   ++ G    A  + + ++
Sbjct: 101 LLQTGKIPQASSVYKTMTSHG-------CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 153

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            +G + +   ++  +  L K  ++    ++  +M       +  T+N++I  LCK   +E
Sbjct: 154 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVE 213

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGD--------------------------- 266
            A + +  ML++G  P+V  +N++I+  C+ G+                           
Sbjct: 214 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAI 273

Query: 267 ---------LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
                    +E A+ L  K+   + +   P   T+N ++NG CK+GR+E A ++   ++ 
Sbjct: 274 VDWLAKNKKIEEAVALMEKI---TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 330

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G   +V TY +LIDG  +   S EA +L  EM  RGL  + V Y + I  L   G +  
Sbjct: 331 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 390

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  V   M      PD  T S +  GL + G +  A ++   +    +  +   Y+ LI+
Sbjct: 391 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 450

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LCK+  +  A ++L+ M      PD ITY  LIDG CK G++E A   ++ M +   KP
Sbjct: 451 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
           ++  YN +I+G CK  + DAA  +    +S R    + +TY  LI+G     ++ +A   
Sbjct: 511 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCS-ANVVTYGALISGLCKRRQLTKASLY 569

Query: 556 FSEMRNVG 563
           F  M+  G
Sbjct: 570 FQHMKERG 577



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 35/319 (10%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           EEA+ L +++   G  P    YN+ ++ L   G +E A+ +L  ++D    PD  TY+ L
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GL +     +A+KL  ++    +  D   Y  LI  L ++  +  A  +  +M   G 
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +PD++T  T+IDG  K G I  AV+++++M+     PN V+Y+++I+GLCK   +D A  
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA-- 180

Query: 521 LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                                             M ++M+      + + YN+LI+ LCK
Sbjct: 181 --------------------------------LEMLAQMKKAFCTPDTITYNVLIDGLCK 208

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI-ELHDDMVLSGVSPDNQ 639
            G  + AR     M+  G  PD  TY  L++ F K  + +     L  +  ++G + D  
Sbjct: 209 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIH 268

Query: 640 TYNAIISPLLGEKSAEDQV 658
           TY AI+  L   K  E+ V
Sbjct: 269 TYTAIVDWLAKNKKIEEAV 287


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 164/635 (25%), Positives = 289/635 (45%), Gaps = 43/635 (6%)

Query: 27  ANPSTEDIVFRAICVNLRQRKWKI---LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTW 83
            NP  E  +   I   L   KW+    L  ++P L    V  ++ +  K+    L F+ W
Sbjct: 44  TNPFPE--LVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNIL-QTHKNTDSVLRFFFW 100

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK 143
           +     F H +    ++++ LV  R F                +P + +  L+       
Sbjct: 101 ISRRKFFKHDMSCFVSMLNRLVRDRLF----------------APADHVRILM------- 137

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWK 202
                    +++C   G  +     + ++  K     ++ ++   L  L K + +     
Sbjct: 138 ---------IKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARD 188

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +Y +M++ G   ++ TFN +I  LCK+ +++EA  +   + +   +PN   +  +I   C
Sbjct: 189 MYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHC 248

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +  +L+ A  +F +M     D   PNSVT++ +ING C  GR+E A ++   M++ GI+ 
Sbjct: 249 RNHNLDLAFAMFDRM---VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V TY   +      G S EA+ L  +M KRG +PN   + + I  L  +G  E A+ + 
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+   + P   TY+ L   LC  G  + AF +   +L    +    +YN +I   C  
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++  A  +   M+  G  P++ITY TLI GYCK GN+  A+++ E MK    KP+   Y
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +I+G  +   L+ A SL       G+  + +TY  +I+GYF   K+ +A A+F +M  
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   +   YN++I+   K     +A      M+  G++P+ +TYT+ +    +N     
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             ++  +M      P+  TY+++I  L  E  AED
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED 640



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 246/517 (47%), Gaps = 6/517 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+      G  E A D+++++  KG   +++ +   L  L          
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L  +M   G V N+ TF  +I  L ++ K E A+ LY++ML  G+ P  V +N +IN+ 
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G  E A  +F+ M  +S  S LP++ T+N II  FC +G ++ A  I   M+KAG  
Sbjct: 388 CVEGRFETAFTIFKWM--LSHGS-LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY TLI GY + G+   A+RL + M   GL P+   Y   I      G +E A  +
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M++  I P+H TY+ +  G      V  A  L  +++E   +  + +YN++I+   K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +N+++ A+     M+ +GL+P++ITY + IDG C+ G    A +++  M+K    PNL  
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 502 YNSIINGLCKDASLDAAK--SLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
           Y+S+I GLC++   + A+  +LL      G    + TY TL+ G    G+  EA  +   
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M+  G+  ++  Y  L+   CK    + A  +   M   G       Y  L+    K   
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            EE   +   M+    + D   +  ++  LL E   +
Sbjct: 745 IEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETD 781



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 214/496 (43%), Gaps = 79/496 (15%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++AL+      G  E A+ + + +   G   S   +N  +     + +I +   ++
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 205 KEMVSCGYVENVNTFNLVIYALCKEC---------------------------------- 230
            +M+  G   NV T+N +IY  CK+                                   
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 231 -KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            KLE A SL+Y M++ GI PN V +  II+    +  ++ AL LF KM V SG+  LP+S
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM-VESGN--LPSS 552

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+N +I+GF K   +  AE     M+K G+  NV TY + IDG  R G +  A ++  E
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHE 612

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGA-LFVLSDMIDKHIC-PDHFTYSILTKGLCRN 407
           M KR   PN   Y+S I+ L  EG  E A ++ L   +  + C P+  TY+ L KGLC  
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC-- 670

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
                              G+   Y               A QL+ SM  +GL P    Y
Sbjct: 671 -------------------GEGRCYE--------------ADQLVVSMQKKGLQPSEEIY 697

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-Q 526
             L+ G CK   +E A+ ++ +M  +  + +L  Y ++I  LCK+  ++ A+ + Q   +
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           +    D + +  L++G    G+      +   M +    +N   Y +L   L    C  +
Sbjct: 758 KHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIK 817

Query: 587 ARELMKVMILHGIIPD 602
             ++ + +   GI+ D
Sbjct: 818 IPQISQQL---GIVKD 830



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 12/352 (3%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           GNL   N++  LE ++G        K     +  L+   ++ G  E A  +   +   G 
Sbjct: 461 GNL--NNAMRLLEIMKG-----NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S +   +   +     L ++     L+ +MV  G + +  T+N++I    K   + EA +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
              +M+K G+ PNV+ +   I+  C+ G    A K+F +M      +  PN  T++ +I 
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM---EKRNYFPNLYTYSSLIY 630

Query: 298 GFCKLGRVEFAE--EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           G C+ GR E AE   +   +   G + NV TY TL+ G    G   EA +L   M K+GL
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGL 690

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+  +Y + +        VE AL +   M           Y  L   LC+   +++A  
Sbjct: 691 QPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQC 750

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           +   +LE+H   D   + +L++ L K        +LL  M  R    +  TY
Sbjct: 751 IFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 139/324 (42%), Gaps = 22/324 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           AI+    N  + DDAL L   ++ + ++                  +   ++ ++   ++
Sbjct: 522 AIIDGYFNLAKVDDALALFWKMVESGNL-----------------PSSQTYNVMISGFSK 564

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
             +   A +   K+  +G   ++  + +F+  L +    G  +K++ EM    Y  N+ T
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 219 FNLVIYALCKECKLEEA--LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
           ++ +IY LC+E + E+A   +L  R+   G  PNV  +  ++   C  G    A +L   
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M       + P+   +  ++ G CK  +VE A  I Y+M   G   ++  Y  LI    +
Sbjct: 685 M---QKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCK 741

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
               EEA  +   M+++    + VV+   +  L  EG+ +  L +L  M  ++   +  T
Sbjct: 742 ENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801

Query: 397 YSILTKGLCRNGCVKQAFKLHNQV 420
           Y +L + L    C  +  ++  Q+
Sbjct: 802 YVMLARELSALDCAIKIPQISQQL 825


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 226/428 (52%), Gaps = 4/428 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   GH      +   +  L  + +IG    ++ +MV  G+  NV T+  ++ 
Sbjct: 110 ALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMN 169

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK+ +L EAL+L+  M+  GI P++  +N +I+  C + + +    L  +M       
Sbjct: 170 GLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM---VKSK 226

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++PN V+ N +++  CK G+V  A ++   MI+ G++ +V TYA L+DG+      +EA+
Sbjct: 227 IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAV 286

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++ D MV+ G + N V YN+ I+       ++ A+++  +M  + + P+  TYS L  GL
Sbjct: 287 KVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGL 346

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C  G ++ A  L N+++    + +  +Y+IL++YLCK++ LA A  LL ++    L PD+
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
             Y   IDG C+ G++E A  ++ N+     +P++  +N +I GLCK   LD A  L + 
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G L +  TYNT+  G   N K + A  +  EM   G + +     +L+  L   G 
Sbjct: 467 MDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGL 526

Query: 584 YQQARELM 591
            Q  ++++
Sbjct: 527 DQSVKQIL 534



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 234/479 (48%), Gaps = 5/479 (1%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           I  +   L+ + K+        L K+M S G   +V T  +VI + C   +++ ALS+  
Sbjct: 56  IFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLA 115

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           ++LK G  P+   F  ++   C VG +  AL +F KM    G+   PN VT+  ++NG C
Sbjct: 116 KILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM---VGEGFQPNVVTYGTLMNGLC 172

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K  ++  A  +   MI  GI  ++ TY +LI         +    L +EMVK  +MPN V
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
             N  +  L  EG V  A  V+  MI   + PD  TY+ L  G C    + +A K+ + +
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           +    V +  SYN LIN  CK   +  A  L   M  + LIP+ +TY TLI G C  G +
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
           + A+ ++  M    + PNLV Y+ +++ LCK+  L  A +LL+A +   L  D   YN  
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G    G +  A  +FS +   G+  +   +NI+I  LCK G   +A +L + M  +G 
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGC 472

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + +  TY T+     +N      I+L ++M+  G S D  T  A++  +L +   +  V
Sbjct: 473 LRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVST-TALLVKMLSDDGLDQSV 530



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 218/418 (52%), Gaps = 4/418 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++ALS ++RML     P +  F  ++    ++      L L +KM       + P+  T
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFG---IPPDVYT 93

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              +IN FC L RV+FA  +   ++K G   +  T+ TL+ G    G   EAL + D+MV
Sbjct: 94  LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G  PN V Y + ++ L  +  +  AL + S+MI K I PD FTY+ L   LC     K
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
               L N++++  ++ +  S NI+++ LCK   +  A  ++  MI  G+ PD++TY  L+
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           DG+C    ++ AV+V++ M +     N+V YN++ING CK   +D A  L +   R  L+
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + +TY+TLI+G    G++ +A A+F+EM   G   N V Y+IL+++LCK     +A  L
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +K +    + PD   Y   +    +    E   +L  ++   G+ PD  T+N +I  L
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGL 451



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 1/191 (0%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P I  +  L+    K  +    + + + M      P++     +IN  C    +D A S+
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 522 LQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L    ++G   D  T+ TL+ G  + GKI EA  +F +M   G   N V Y  L+N LCK
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
                +A  L   MI  GI PD  TY +L+      C  + V  L ++MV S + P+  +
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 641 YNAIISPLLGE 651
            N ++  L  E
Sbjct: 234 LNIVVDALCKE 244


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 237/475 (49%), Gaps = 5/475 (1%)

Query: 181 IHAWNNFLSHLVKLNEI-GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           I  +   LS +VK+ +  G    L K+M   G   ++ T +++I       +++ A S++
Sbjct: 94  IIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVF 153

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M+K G+ P+ V FN +IN  C+VG    A++ F            P   T+  IING 
Sbjct: 154 SKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF---EASGCQPTVYTYTTIINGL 210

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A  +   M +AG   NV TY  LID   +     EAL +   M  + + P+ 
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI 270

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS I  L      + A  +L++M   +I P+ FT+++L   +C+ G V +A  +   
Sbjct: 271 FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT 330

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E  +  D  +Y+ L+        +  A++L  +MI +G  PD  +Y  LI GYCK   
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNT 538
           I+ A Q++  M      P+ V YN++I+GLC+   L  A+ L +     G L D  TY+ 
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G+   G + +AF +F  M++  +  +   YNILI+ +CKFG  + AR+L   + + G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           ++P+   YTT++    K    +E +E   +M   G  PD  +YN II   L  K 
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKD 565



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 228/471 (48%), Gaps = 6/471 (1%)

Query: 140 EICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           E+   +P ++    L+   + +   + A+ V  K+   G       +N  ++ L K+ + 
Sbjct: 122 ELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKF 181

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
            +  + + +  + G    V T+  +I  LCK  +   A  L+ +M ++G  PNVV +N++
Sbjct: 182 AQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNIL 241

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C+   +  AL +F     M    + P+  T+N +I G C   R + A  +   M  
Sbjct: 242 IDSLCKDKLVNEALDIF---SYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
             I  N+ T+  L+D   + G   EA  +   M + G+ P+ V Y+S ++      ++  
Sbjct: 299 LNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE 358

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +   MI K   PD F+Y+IL KG C+   + +A +L N+++ + +  D  +YN LI+
Sbjct: 359 ARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIH 418

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+   L  A+ L  +M   G +PD+ TY  L+DG+CK G +  A +++  M+    KP
Sbjct: 419 GLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKP 478

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMF 556
           ++ +YN +I+ +CK  +L  A+ L       GLL  +  Y T+IN     G + EA   F
Sbjct: 479 DIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAF 538

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
             M   G   ++  YN++I    ++    +A +L+  M   G + +  T T
Sbjct: 539 RNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 172/353 (48%), Gaps = 21/353 (5%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           AL+ ++++ +  R S  + +  +++  L N+RR+ +A  L+  + S N + P  F     
Sbjct: 254 ALDIFSYM-KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN-IMPNIF----- 306

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
                       F+ LV A  + G    A  V + +   G    +  +++ +       E
Sbjct: 307 -----------TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           I    KL+  M++ G   +  ++N++I   CK  +++EA  L+  M+  G+ P+ V +N 
Sbjct: 356 IVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNT 415

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I+  CQ+G L  A  LF+    M  +  LP+  T++ +++GFCK G +  A  +   M 
Sbjct: 416 LIHGLCQLGRLREAQDLFKN---MHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQ 472

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
              +  ++  Y  LID   + G+ ++A +L  E+  +GL+PN  +Y + I+ L  EG ++
Sbjct: 473 STYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLD 532

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
            AL    +M      PD F+Y+++ +G  +     +A +L  ++ +   V +A
Sbjct: 533 EALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEA 585


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 252/491 (51%), Gaps = 11/491 (2%)

Query: 125 SVSPLEFLEGLLDSYEICKATPA-VFDALVRACTQI-GATEGAYDVIQKLKVKGHSVSIH 182
           S  PL  L   L +  +  ++P   FD+L+++   +      A   +   +  G+  S+ 
Sbjct: 98  SFPPLPLLVCFLRALRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVL 157

Query: 183 AWNNFLSHL--VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           A+N  L  L    L    RF   +  M+S G   NV T+N+++ ALC     +EALS+  
Sbjct: 158 AYNAVLLALSDASLTSARRF---FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILR 214

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M  +G  PNVV +N ++    + G+++ A +L   +G+M    + PN VT N ++NG C
Sbjct: 215 DMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL---VGMMREGGLKPNLVTFNSMVNGMC 271

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G++E A ++   M++ G+  +  +Y TL+ GY + G S EAL +  EM ++G+MP+ V
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            + S IH +   G++E A+ ++  M ++ +  +  T++ L  G C+ G +  A      +
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            +  +      YN LIN  C    +  A++LL  M  +GL PD++TY T+I  YCK  + 
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
             A ++ + M +    P+ + Y+S+I  LC +  L  A  L +   ++GL  D  TY +L
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G+   G +  A ++  +M   G+  + V Y++LIN L K     +A++L+  +     
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571

Query: 600 IPDYVTYTTLV 610
           IP    Y  L+
Sbjct: 572 IPANTKYDALM 582



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/411 (34%), Positives = 214/411 (52%), Gaps = 7/411 (1%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+V+ +N ++  A     L  A + F  M     D V PN  T+N ++   C  G  
Sbjct: 151 GYVPSVLAYNAVL-LALSDASLTSARRFFDSM---LSDGVAPNVYTYNILVRALCGRGHR 206

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + A  I   M  AG   NV TY TL+  + R G  + A RL   M + GL PN V +NS 
Sbjct: 207 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM 266

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++ +   G +E A  V  +M+ + + PD  +Y+ L  G C+ GC  +A  +  ++ ++ +
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
           + D  ++  LI+ +CK+ NL  A  L+  M  RGL  + +T+  LIDG+CK G ++ A+ 
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
               MK+   KP++V YN++ING C    +D A+ LL   +  GL  D +TY+T+I+ Y 
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            N     AF +  +M   G+  + + Y+ LI  LC       A  L K MI  G+ PD  
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           TYT+L+    K  + E  + LHD MV +GV PD  TY+ +I+ L   KSA 
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL--SKSAR 555



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/488 (28%), Positives = 245/488 (50%), Gaps = 25/488 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ LVRA    G  + A  +++ ++  G   ++  +N  ++   +  E+    +L   M
Sbjct: 192 TYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 251

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N+ TFN ++  +CK  K+E+A  ++  M++ G+ P+ V +N ++   C+ G  
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +F +M   +   ++P+ VT   +I+  CK G +E A  +   M + G+  N  T+
Sbjct: 312 HEALSVFAEM---TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTF 368

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LIDG+ + G  ++AL     M +  + P+ V YN+ I+     G ++ A  +L +M  
Sbjct: 369 TALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEA 428

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + PD  TYS +    C+N     AF+L+ Q+LE+ ++ DA +Y+ LI  LC    L+ 
Sbjct: 429 KGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSD 488

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  +MI  GL PD  TY +LIDG+CK GN+E A+ +++ M K    P++V Y+ +IN
Sbjct: 489 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLIN 548

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNT-------------------LINGYFINGK 548
           GL K A    A+ LL    ++   D I  NT                   L+ G+ + G 
Sbjct: 549 GLSKSARAMEAQQLL---FKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGL 605

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA  ++  M +    ++   Y++LI+  C+ G   +A    K M+  G  P+  +  +
Sbjct: 606 MNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTIS 665

Query: 609 LVTRFSKN 616
           L+    +N
Sbjct: 666 LIRGLFEN 673



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 241/508 (47%), Gaps = 48/508 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ LV A  + G  +GA  ++  ++  G   ++  +N+ ++ + K  ++    
Sbjct: 221 CGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDAR 280

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++ EMV  G   +  ++N ++   CK     EALS++  M + GI P+VV F  +I+  
Sbjct: 281 KVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 340

Query: 262 CQVGDLEFALKLFRKM-------------GVMSG--------DSVL-----------PNS 289
           C+ G+LE A+ L R+M              ++ G        D++L           P+ 
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSV 400

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           V +N +ING+C +GR++ A E+ + M   G+  +V TY+T+I  Y +   +  A  L  +
Sbjct: 401 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQ 460

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+++G++P+ + Y+S I  L  E  +  A  +  +MI   + PD FTY+ L  G C+ G 
Sbjct: 461 MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG- 468
           V+ A  LH+++++  ++ D  +Y++LIN L KS     A+QLL  +     IP    Y  
Sbjct: 521 VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDA 580

Query: 469 --------------TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
                          L+ G+C  G +  A +VY++M       +  +Y+ +I+G C+  +
Sbjct: 581 LMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGN 640

Query: 515 LDAAKSLLQASQRIGLLDAITYN-TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  A S  +   + G     T   +LI G F NG + EA  +  ++ N     +      
Sbjct: 641 VMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKA 700

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIP 601
           LI+     G      +++  M   G++P
Sbjct: 701 LIDLNLNEGNVDAVLDVLHGMAKDGLLP 728



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 168/320 (52%), Gaps = 1/320 (0%)

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            S   A R  D M+  G+ PN   YN  +  L   G  + AL +L DM      P+  TY
Sbjct: 169 ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTY 228

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L     R G V  A +L   + E  +  +  ++N ++N +CK+  +  A+++   M+ 
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR 288

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL PD ++Y TL+ GYCK G    A+ V+  M +    P++V + S+I+ +CK  +L+ 
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A +L++  +  GL ++ +T+  LI+G+   G + +A      M+   I  + V YN LIN
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C  G   +AREL+  M   G+ PD VTY+T+++ + KNC      EL+  M+  GV P
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 468

Query: 637 DNQTYNAIISPLLGEKSAED 656
           D  TY+++I  L GEK   D
Sbjct: 469 DAITYSSLIRVLCGEKRLSD 488



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + YN ++     +  +  A   F  M + G+A N   YNIL+  LC  G  ++A  +++ 
Sbjct: 157 LAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRD 215

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M   G  P+ VTY TLV  F +    +    L   M   G+ P+  T+N++++ +     
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275

Query: 654 AED 656
            ED
Sbjct: 276 MED 278



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 111/275 (40%), Gaps = 35/275 (12%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +++ +L   +R  DA +L  N++    + P EF                 + +L+    +
Sbjct: 475 SLIRVLCGEKRLSDAHVLFKNMIKLG-LQPDEF----------------TYTSLIDGHCK 517

Query: 159 IGATEGA---YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF-WKLYKE-------- 206
            G  E A   +D + K  V    V+     N LS   +  E  +  +KLY E        
Sbjct: 518 EGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTK 577

Query: 207 ---MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
              ++ C     + +   ++   C +  + EA  +Y  ML      +   ++++I+  C+
Sbjct: 578 YDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCR 637

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G++  AL   ++M  + G    PNS +   +I G  + G V  A+++   ++      +
Sbjct: 638 AGNVMKALSFHKQM--LQG-GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLAD 694

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
                 LID     G+ +  L +   M K GL+P+
Sbjct: 695 AEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 274/535 (51%), Gaps = 8/535 (1%)

Query: 116 LMGNLMSANSVS-PLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           +MG L  AN +   +E  E +  + ++       ++ ++      G  + AY ++++ + 
Sbjct: 172 MMGVLCKANRLDEAVEIFEQMEQNRQV--PCAYAYNTMIMGYGSAGKFDEAYSLLERQRA 229

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG   S+ A+N  L+ L K  +  +  ++++EM     + N+ T+N++I  LCK   +E 
Sbjct: 230 KGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEA 288

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  +   M ++G++PNV   N++I+  C+   L+ A  +F  M         P+  T   
Sbjct: 289 AFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDY---KVCSPDGATFCS 345

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I+G  K GRV+ A  I   M+ A    NV  Y +LI  + +    E+  ++  EM++ G
Sbjct: 346 LIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSG 405

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+ ++ N+ +  +F  G+ E    +  ++  +   PD  +YSIL   L + G  ++ +
Sbjct: 406 CSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETY 465

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L+  + ++  V D  +YN +I+  CKS  +  A QLL  M   G  P ++TYG+++DG 
Sbjct: 466 ELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGL 525

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
            K   ++ A  ++E  K    + N VIY+S+I+G  K   +D A  +++   + GL   +
Sbjct: 526 AKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNV 585

Query: 535 -TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            T+N L++G     +I EA   F  M+++    N++ Y ILIN LCK   + +A    + 
Sbjct: 586 YTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQE 645

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           M   G+ P+ +TYT +++  +K+ +  +   L +    SG  PD+ +YNA+I  L
Sbjct: 646 MQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL 700



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 251/523 (47%), Gaps = 7/523 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
            ++LE +L    I    P  +    LV +C +      A+D++Q ++      +  A+  
Sbjct: 7   FDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTT 66

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +  L ++ E  R   L+ +M   GY  NV+    +I    +E +++ ALSL   M  + 
Sbjct: 67  LIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT 126

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
              ++V +N+ I+   +VG ++ A K F +   M  + ++P+ VT+  ++   CK  R++
Sbjct: 127 FDADIVLYNVCIDCFGKVGKVDMAWKFFHE---MKANGLVPDDVTYTSMMGVLCKANRLD 183

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A EI   M +         Y T+I GY   G  +EA  L +    +G +P+ V YN  +
Sbjct: 184 EAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCIL 243

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             L  +G  + AL +  +M  +   P+  TY+I+   LC+ G V+ AFK+ + + E  + 
Sbjct: 244 TCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLF 302

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  + NI+I+ LCK+  L  A  +   M  +   PD  T+ +LIDG  K G ++ A ++
Sbjct: 303 PNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRI 362

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           YE M   ++ PN+V+Y S+I    K    +    + +   R G   D +  NT ++  F 
Sbjct: 363 YERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFK 422

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G+  +  A+F E++  G   +   Y+ILI+ L K G  ++  EL   M   G + D   
Sbjct: 423 AGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRA 482

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           Y T++  F K+    +  +L ++M   G  P   TY +++  L
Sbjct: 483 YNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGL 525



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 194/403 (48%), Gaps = 4/403 (0%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           + +  L K   +   +++Y+ M+    + NV  +  +I    K  + E+   +Y  M++S
Sbjct: 345 SLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRS 404

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+++  N  ++   + G+ E    LF ++        LP++ +++ +I+   K G  
Sbjct: 405 GCSPDLMLLNTYMDCVFKAGETEKGRALFEEI---KARGFLPDTRSYSILIHSLVKAGFA 461

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
               E+ YAM   G   + R Y T+IDG+ + G   +A +L +EM   G  P  V Y S 
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           +  L     ++ A  +  +     I  +   YS L  G  + G V +A+ +  +++++ +
Sbjct: 522 VDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL 581

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             + Y++N L++ L K+  +  A     SM      P+ ITY  LI+G CK      A  
Sbjct: 582 TPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFV 641

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYF 544
            ++ M+K   KPN + Y ++I+GL K  ++  A SL +  +  G + D+ +YN +I G  
Sbjct: 642 FWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLS 701

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           I  +  +A+ +F E R  G +++      L++ L K  C +QA
Sbjct: 702 IANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 182/394 (46%), Gaps = 20/394 (5%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
           C+++  L    R DDA  +   ++ A+ +  +                  V+ +L+R   
Sbjct: 344 CSLIDGLGKQGRVDDAYRIYERMLDADQIPNV-----------------VVYTSLIRNFF 386

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +    E  + + +++   G S  +   N ++  + K  E  +   L++E+ + G++ +  
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +++++I++L K     E   LYY M   G   +   +N +I+  C+ G +  A +L  +M
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M      P  VT+  +++G  K+ R++ A  +       GI+ N   Y++LIDG+ + 
Sbjct: 507 KTMGHH---PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKV 563

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +EA  + +EM+++GL PN   +N  +  L    ++  AL     M D    P+  TY
Sbjct: 564 GRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITY 623

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
            IL  GLC+     +AF    ++ ++ +  +  +Y  +I+ L KS N+A A  L      
Sbjct: 624 CILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRA 683

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            G IPD  +Y  +I+G         A Q++E  +
Sbjct: 684 SGGIPDSASYNAMIEGLSIANRALDAYQLFEETR 717



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 150/352 (42%), Gaps = 2/352 (0%)

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           ++ E+I   M  AG      T   L+    +     EA  L   M      P    Y + 
Sbjct: 8   DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L   G+ +  L + + M +     +    + L +   R G V  A  L +++     
Sbjct: 68  IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D   YN+ I+   K   +  A +    M   GL+PD +TY +++   CK   ++ AV+
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVE 187

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYF 544
           ++E M++  + P    YN++I G       D A SLL+  +  G + ++  YN ++    
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             GK  +A  +F EM+   +  N   YNI+I  LCK G  + A ++   M   G+ P+  
Sbjct: 248 KKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVR 306

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           T   ++ R  K    +E   + + M     SPD  T+ ++I  L  +   +D
Sbjct: 307 TINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDD 358


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 256/506 (50%), Gaps = 15/506 (2%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F  A+LL G L  +N +     L G +     C    A+++AL+   ++      A+  +
Sbjct: 11  FTFAILLRG-LCRSNQLEKARQLLGRMKEMG-CVPDDAIYNALISGYSKAKDFGQAFKFL 68

Query: 170 QKLKVKGHSV-SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
            ++ VK H + ++  + N +  L K        KL  EM   G   N+ T+N+++  LC+
Sbjct: 69  AEM-VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E KL+EA  +   M   G +P+VV +N  I   C+   ++ A K   +M       V P+
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM------PVTPD 181

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            V++  +ING CK G ++ A  +   M   G   +V TY++LIDG+ +GG  E A+ L D
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M+K G  PN V YNS +  L   G +  A  +L +M  +   PD  +Y+    GLC+  
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            VK+A  + ++++E     +A SY++L+  LCK   L  A  L+     +  I DI+ Y 
Sbjct: 302 RVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYT 361

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            L+DG CKGG  + A  ++   K +++K   P++  YN +++  CK   +D A  + +  
Sbjct: 362 VLLDGLCKGGRFDEACALFS--KVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
                 + +T+N L++G  ++ ++++A  M   M + G   + V Y  L++ +CK G   
Sbjct: 420 LERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSA 479

Query: 586 QARELMKVMILHGIIPDYVTYTTLVT 611
            A EL +  +  G +PD VTY+ L+T
Sbjct: 480 AALELFEEAVKGGCVPDVVTYSALIT 505



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 252/519 (48%), Gaps = 13/519 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F  L+R   +    E A  ++ ++K  G       +N  +S   K  + G+ +
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K   EMV    +  V T+  ++  LCK  + ++A+ L   M   G  PN+  +N+I+   
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   L+ A K+  +M V       P+ VT+N  I G CK  RV+   E R  + +  + 
Sbjct: 126 CEERKLDEAKKMLEEMAVRG---YFPDVVTYNSFIKGLCKCDRVD---EARKFLARMPVT 179

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V +Y T+I+G  + G  + A R+ D+M  RG  P+ V Y+S I      G+VE A+ +
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+     P+   Y+ L   L R G + +A  +  ++       D  SYN  I+ LCK
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +  AK +   M+ RG  P+  +Y  L++  CK   ++ A+ + E  ++  +  ++++
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359

Query: 502 YNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
           Y  +++GLCK    D A +L      ++I   D   YN +++ +    +I +A  +  +M
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419

Query: 560 --RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
             RN     N V +NIL++ LC       A  ++  M+  G IPD+VTY TLV    K  
Sbjct: 420 LERN---CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCG 476

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                +EL ++ V  G  PD  TY+A+I+ L+ E  AE+
Sbjct: 477 KSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 265/586 (45%), Gaps = 90/586 (15%)

Query: 111 DDAL---LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYD 167
           DDA+   L+ G   + +     +FL  ++ ++  C  T   +  +V    + G T+ A  
Sbjct: 44  DDAIYNALISGYSKAKDFGQAFKFLAEMVKNH--CLPTVVTYTNIVDGLCKAGRTKDAVK 101

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           ++ +++ KG S +I+ +N  +  L +  ++    K+ +EM   GY  +V T+N  I  LC
Sbjct: 102 LLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLC 161

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K  +++EA     RM    + P+VV +  +IN  C+ GDL+ A ++  +M   +     P
Sbjct: 162 KCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQM---TNRGCTP 215

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL----------------- 330
           + VT++ +I+GFCK G VE A  +  +M+K G   N+  Y +L                 
Sbjct: 216 DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDML 275

Query: 331 ------------------IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
                             IDG  +    ++A  + D MV+RG  PN   Y+  +  L  +
Sbjct: 276 VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKK 335

Query: 373 GDVEGALFVL-----------------------------------SDMIDKHIC-PDHFT 396
            +++ A+ ++                                   S ++D+ IC PD F 
Sbjct: 336 KELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFF 395

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+++    C+   + +A ++H Q+LE +   +  ++NIL++ LC  + L+ A+ +L +M+
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMV 454

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G IPD +TYGTL+D  CK G    A++++E   K    P++V Y+++I GL  +   +
Sbjct: 455 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAE 514

Query: 517 AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            A  L         LD   +N +I GY  NG       +F E+    +  N   +   I+
Sbjct: 515 EAYLLFTK------LDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEIS 568

Query: 577 F-LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             L K     +AR L    +  G  PD     TL+  F+K    EE
Sbjct: 569 GKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEE 614



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 4/345 (1%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           MI      +  T+A L+ G  R    E+A +L   M + G +P++ +YN+ I       D
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
              A   L++M+  H  P   TY+ +  GLC+ G  K A KL +++ ++    + Y+YN+
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           ++  LC+   L  AK++L  M VRG  PD++TY + I G CK   ++ A +    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT- 179

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             P++V Y ++INGLCK   LD+A  +L Q + R    D +TY++LI+G+   G++  A 
Sbjct: 180 --PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +   M  +G   N V YN L+  L + G   +A +++  M   G  PD V+Y   +   
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            K    ++   + D MV  G +P+  +Y+ ++  L  +K  +D +
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 176/347 (50%), Gaps = 4/347 (1%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M   S  P++ T   ++ G C+  ++E A ++   M + G   +   Y  LI GY++   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A +   EMVK   +P  V Y + +  L   G  + A+ +L +M DK   P+ +TY++
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           + +GLC    + +A K+  ++       D  +YN  I  LCK + +  A++ L+ M V  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV-- 178

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             PD+++Y T+I+G CK G+++ A ++ + M      P++V Y+S+I+G CK   ++ A 
Sbjct: 179 -TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL +  ++G   + + YN+L+      G I +A  M  EM   G   + V YN  I+ L
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           CK    ++A+ +   M+  G  P+  +Y+ LV    K    ++ I L
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITL 344



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 187/398 (46%), Gaps = 50/398 (12%)

Query: 134 GLLDSYEI--CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GLLDS     C+     +++L+ A  ++G    A D++ +++ +G +  + ++N  +  L
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL------------- 238
            K   + +   ++  MV  G   N +++++++  LCK+ +L++A++L             
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 239 -YYRMLKSGIW----------------------PNVVCFNMIINEACQVGDLEFALKLFR 275
             Y +L  G+                       P+V  +N++++  C+   ++ AL++ +
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M     +    N VT N +++G C   R+  AE +   M+  G   +  TY TL+D   
Sbjct: 418 QML----ERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMC 473

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G S  AL L +E VK G +P+ V Y++ I  L  E   E A  + + +       D  
Sbjct: 474 KCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVA 526

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN-YLCKSNNLAAAKQLLSS 454
            ++ +  G   NG      KL  +++E  +  +A ++   I+  L K+ +L  A+ L   
Sbjct: 527 LWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDR 586

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            +  G  PD+    TLID + K G++E A +++ +MK+
Sbjct: 587 AVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 237/451 (52%), Gaps = 15/451 (3%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G   NV TF  ++  LC+E ++ +AL+L  RM++ G  P+ V +  I+N  C++GD
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              AL + RKM       +  N V ++ I++  CK G    A+ I   M + GI  NV T
Sbjct: 61  TVSALNMLRKM---DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLT 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  +IDGY   G   +A +L  +M++R + P+ V +++ I+    EG V GA  +  +M+
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN--- 443
            ++I P   TYS +  G C++  ++ A  + + ++ +    D  + N LI+  C++    
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237

Query: 444 --------NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
                   N+  A+ L   MI  G+ PDI+T  TL+ G C+ G +E A+++++  +K + 
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
             +    N IING+CK   +D A  L  +    G+  D +TYN LI  +   G    A  
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           ++ EM   GI  + V YN +++  CK    ++AR+++  M+  G  PD VT++TL+  + 
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYC 417

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           K    ++ +EL  +M   G+  D  TYNA+I
Sbjct: 418 KAGRVDDGLELFSEMCQRGLVADTITYNALI 448



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 248/500 (49%), Gaps = 15/500 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C A    F  L+    + G    A  ++ ++  +GH      +   ++ + KL +     
Sbjct: 6   CPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSAL 65

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            + ++M       NV  ++ ++  LCK+    +A +++  M + GI+PNV+ +N +I+  
Sbjct: 66  NMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGY 125

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G    A +L R M   + D   P+ VT + +IN F K G+V  AEE+   M++  I 
Sbjct: 126 CSYGKWSDAEQLLRDMIERNID---PDVVTFSALINAFVKEGKVSGAEELYREMLRRNIF 182

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI-----------HWLF 370
               TY+++IDG+ +    E+A  + D MV +G  P+ +  N+ I           H   
Sbjct: 183 PTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+V  A  +  +MI   + PD  T + L  GLC NG +++A ++     +  M  D  
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           + NI+IN +CK N +  A  L +S+ V G+  D++TY  LI  + K GN   A  +Y  M
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKI 549
                 P+ V YNS+++G CK   L+ A+ ++ +    G   D +T++TLI GY   G++
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +   +FSEM   G+  + + YN LI+  CK G    A+++ + M+  G+ PD +T+ ++
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSM 482

Query: 610 VTRFSKNCSPEEVIELHDDM 629
           +         ++ + + +D+
Sbjct: 483 LAGLCTKAELQKGLTMLEDL 502



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 179/356 (50%), Gaps = 14/356 (3%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            ++  ++  VK  ++    +LY+EM+         T++ +I   CK  +LE+A  ++  M
Sbjct: 152 TFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLM 211

Query: 243 LKSGIWPNVVCFNMIINEAC-----------QVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +  G  P+++  N +I+  C           QVG++  A  LF++M     + V P+ VT
Sbjct: 212 VSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEM---ISNGVSPDIVT 268

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N ++ G C+ G++E A E+     K+ +D +  T   +I+G  +G   +EA  L + + 
Sbjct: 269 CNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLP 328

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G+  + V YN  I     EG+   A  +  +M+ K I P   TY+ +  G C+   ++
Sbjct: 329 VNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLE 388

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A ++ + ++ E    D  +++ LI   CK+  +    +L S M  RGL+ D ITY  LI
Sbjct: 389 EARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALI 448

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            G+CK G++ GA  ++E M      P+ + + S++ GLC  A L    ++L+  Q+
Sbjct: 449 HGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 181/357 (50%), Gaps = 15/357 (4%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M++ G   NV T+ TL++G  R G   +AL L D MV+ G  P+ V Y + ++ +   GD
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
              AL +L  M +  I  +   YS +   LC++G   +A  +  ++ E+ +  +  +YN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +I+  C     + A+QLL  MI R + PD++T+  LI+ + K G + GA ++Y  M +  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING------YFIN- 546
             P  + Y+S+I+G CK + L+ AK +       G   D IT NTLI+G      + I+ 
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 547 ----GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G +  A  +F EM + G++ + V  N L+  LC+ G  ++A E+ KV     +  D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS---AED 656
             T   ++    K    +E  +L + + ++GV  D  TYN +I   + E +   AED
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 100/188 (53%), Gaps = 3/188 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+D+   L V G    +  +N  +   VK     R   +Y EM+  G + +  T+N ++ 
Sbjct: 320 AWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVD 379

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             CK+ +LEEA  +   M+  G  P+VV F+ +I   C+ G ++  L+LF +   M    
Sbjct: 380 GFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSE---MCQRG 436

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++ +++T+N +I+GFCK+G +  A++I   M+ +G+  +  T+ +++ G       ++ L
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGL 496

Query: 345 RLCDEMVK 352
            + +++ K
Sbjct: 497 TMLEDLQK 504



 Score = 43.1 bits (100), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 2/119 (1%)

Query: 129 LEFLEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           LE    ++DS   E C      F  L++   + G  +   ++  ++  +G       +N 
Sbjct: 387 LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNA 446

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
            +    K+ ++     +++EMVS G   +  TF  ++  LC + +L++ L++   + KS
Sbjct: 447 LIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 258/516 (50%), Gaps = 8/516 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           +  P V  F+ L  A  +    E    + ++++ KG + SI+  +  ++   +  ++   
Sbjct: 83  RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 142

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           +    +++  GY  +   FN ++  LC EC++ EAL L  RM++ G  P ++  N ++N 
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C  G +  A+ L  +M V +G    PN VT+  ++N  CK G+   A E+   M +  I
Sbjct: 203 LCLNGKVSDAVVLIDRM-VETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +   Y+ +IDG  + GS + A  L +EM  +G   + + YN+ I      G  +    
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L DMI + I P+  T+S+L     + G +++A +L  ++++  +  +  +YN LI+  C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K N L  A Q++  MI +G  PDI+T+  LI+GYCK   I+  ++++  M       N V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439

Query: 501 IYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
            YN+++ G C+   L+ AK L Q   S+R+   D ++Y  L++G   NG++ +A  +F +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR-PDIVSYKILLDGLCDNGELEKALEIFGK 498

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           +    + ++   Y I+I+ +C       A +L   + L G+  D   Y  +++   +  S
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
             +   L   M   G +PD  TYN +I   LG+  A
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 247/485 (50%), Gaps = 4/485 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+  + K+   G+      +N  L+ L     +    +L   MV  G+   + T N ++ 
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   K+ +A+ L  RM+++G  PN V +  ++N  C+ G    A++L RKM      +
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM---EERN 258

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +  ++V ++ II+G CK G ++ A  +   M   G   ++ TY TLI G+   G  ++  
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L  +M+KR + PN V ++  I     EG +  A  +L +M+ + I P+  TY+ L  G 
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   +++A ++ + ++ +    D  ++NILIN  CK+N +    +L   M +RG+I + 
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TL+ G+C+ G +E A ++++ M     +P++V Y  +++GLC +  L+ A  +   
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            ++  + LD   Y  +I+G     K+ +A+ +F  +   G+ ++   YNI+I+ LC+   
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A  L + M   G  PD +TY  L+     +       EL ++M  SG   D  T   
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618

Query: 644 IISPL 648
           +I+ L
Sbjct: 619 VINML 623



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 224/455 (49%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+++M+    +  V  FN +  A+ K  + E  L+L  +M   GI  ++   +++IN  C
Sbjct: 75  LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L +A   F  MG +      P++V  N ++NG C   RV  A E+   M++ G   
Sbjct: 135 RCRKLSYA---FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            + T  TL++G    G   +A+ L D MV+ G  PN V Y   ++ +   G    A+ +L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +++I  D   YSI+  GLC++G +  AF L N++  +    D  +YN LI   C +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                  +LL  MI R + P+++T+  LID + K G +  A Q+ + M +    PN + Y
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I+G CK+  L+ A  ++      G   D +T+N LINGY    +I +   +F EM  
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N V YN L+   C+ G  + A++L + M+   + PD V+Y  L+     N   E+
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E+   +  S +  D   Y  II  +      +D
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 258/531 (48%), Gaps = 23/531 (4%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           E+   +HS+ +   +++     R+   A   MG +M                 YE     
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL--------------GYE---PD 157

Query: 146 PAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
             +F+ L+   C +   +E A +++ ++   GH  ++   N  ++ L    ++     L 
Sbjct: 158 TVIFNTLLNGLCLECRVSE-ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             MV  G+  N  T+  V+  +CK  +   A+ L  +M +  I  + V +++II+  C+ 
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G L+ A  LF +M +    +   + +T+N +I GFC  GR +   ++   MIK  I  NV
Sbjct: 277 GSLDNAFNLFNEMEIKGFKA---DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T++ LID + + G   EA +L  EM++RG+ PN + YNS I     E  +E A+ ++  
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           MI K   PD  T++IL  G C+   +    +L  ++    ++ +  +YN L+   C+S  
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  AK+L   M+ R + PDI++Y  L+DG C  G +E A++++  ++K + + ++ IY  
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           II+G+C  + +D A  L  +    G+ LDA  YN +I+       +++A  +F +M   G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
            A +++ YNILI           A EL++ M   G   D  T   ++   S
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 213/419 (50%), Gaps = 4/419 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K ++A+ L+  M++S   P V+ FN + +   +    E  L L ++M       +  +  
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM---ESKGIAHSIY 124

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T + +IN FC+  ++ +A      ++K G + +   + TL++G        EAL L D M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ G  P  +  N+ ++ L   G V  A+ ++  M++    P+  TY  +   +C++G  
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A +L  ++ E ++  DA  Y+I+I+ LCK  +L  A  L + M ++G   DIITY TL
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I G+C  G  +   ++  +M K +  PN+V ++ +I+   K+  L  A  LL+   + G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             + ITYN+LI+G+    ++ EA  M   M + G   + + +NILIN  CK        E
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L + M L G+I + VTY TLV  F ++   E   +L  +MV   V PD  +Y  ++  L
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 204/402 (50%), Gaps = 4/402 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G T  A ++++K++ +   +    ++  +  L K   +   + L+ EM   G+  ++ T+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I   C   + ++   L   M+K  I PNVV F+++I+   + G L  A +L ++M +
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-M 360

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
             G  + PN++T+N +I+GFCK  R+E A ++   MI  G D ++ T+  LI+GY +   
Sbjct: 361 QRG--IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            ++ L L  EM  RG++ N V YN+ +      G +E A  +  +M+ + + PD  +Y I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC NG +++A ++  ++ +  M  D   Y I+I+ +C ++ +  A  L  S+ ++G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  D   Y  +I   C+  ++  A  ++  M +    P+ + YN +I     D     A 
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAF-AMFSEMR 560
            L++  +  G    ++   ++     +G++ ++F  M S  R
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 1/323 (0%)

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
           G  +++A+ L  +M++   +P  + +N     +      E  L +   M  K I    +T
Sbjct: 66  GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
            SI+    CR   +  AF    ++++     D   +N L+N LC    ++ A +L+  M+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G  P +IT  TL++G C  G +  AV + + M +   +PN V Y  ++N +CK     
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  LL+  +   + LDA+ Y+ +I+G   +G +  AF +F+EM   G   + + YN LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
              C  G +    +L++ MI   I P+ VT++ L+  F K     E  +L  +M+  G++
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 636 PDNQTYNAIISPLLGEKSAEDQV 658
           P+  TYN++I     E   E+ +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAI 388


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 237/455 (52%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EMV    + ++  FN ++ A+ K  K +  +SL  RM    I  ++  +N++IN  C
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  AL +  KM  +  +   P+ VT + ++NG+C   R+  A  +   M++ G   
Sbjct: 127 RRSQLPLALAVLGKMMKLGYE---PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  T+ TLI G      + EA+ L D+MV+RG  P+ V Y + ++ L   GD++ AL +L
Sbjct: 184 DTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLL 243

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M    I  D   Y+ +  GLC+   +  AF L N++  + +  D ++YN LI+ LC  
Sbjct: 244 KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNY 303

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + A +LLS+MI R + P+++T+  LID + K G +  A ++Y+ M K    P++  Y
Sbjct: 304 GRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 503 NSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +S+ING C    LD AK + +    +    + +TYNTLI G+    ++ E   +F EM  
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N V YN LI  L + G    A+++ K M+  G+ PD +TY+ L+    K    E+
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + + + +  S + PD  TYN +I  +      ED
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 294/601 (48%), Gaps = 29/601 (4%)

Query: 61  SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
           SL  R     + SP  +L    +   +  +   L S  A+++L     + DDA+ L G +
Sbjct: 18  SLAKRFAQLRKASPLFSLRGVYFSAASYDYREKL-SRNALLNL-----KLDDAIGLFGEM 71

Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
           + +  +  +     LL +    K     FD ++    ++     +YD             
Sbjct: 72  VQSRPLPSIVEFNKLLSAIAKMKK----FDLVISLGERMQNLRISYD------------- 114

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           ++++N  ++   + +++     +  +M+  GY  ++ T + ++   C   ++ +A++L  
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 174

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           +M++ G  P+ V FN +I+          A+ L  +M V  G    P+ VT+  ++NG C
Sbjct: 175 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQM-VQRG--CQPDLVTYGAVVNGLC 231

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G ++ A  +   M K  I+ +V  Y T+IDG  +    ++A  L ++M  +G+ P+  
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YNS I  L   G    A  +LS+MI++ I P+  T+S L     + G + +A KL++++
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           ++  +  D ++Y+ LIN  C  + L  AK +   MI +   P+++TY TLI G+CK   +
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           E  ++++  M +     N V YN++I GL +    D A+ + +     G+  D ITY+ L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           ++G    GK+ +A  +F  ++   +  +   YNI+I  +CK G  +   +L   + L G+
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQ 657
            P+ + YTT+++ F +    EE   L  +M   G  PD+  YN +I   L  G+K+A  +
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 591

Query: 658 V 658
           +
Sbjct: 592 L 592



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 214/413 (51%), Gaps = 5/413 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     + A+V    + G  + A  +++K++       +  +N  +  L K   I   +
Sbjct: 216 CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAF 275

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ +M + G   +V T+N +I  LC   +  +A  L   M++  I PNVV F+ +I+  
Sbjct: 276 ALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAF 335

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+  T++ +INGFC   R++ A+ +   MI     
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY TLI G+ +    EE + L  EM +RGL+ N V YN+ I  LF  GD + A  +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC+ G +++A  +   + +  M  D Y+YNI+I  +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P++I Y T+I G+C+ G  E A  ++  MK+    P+   
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 572

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +  G + DA T + +IN    +G++ +++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 624



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 163/341 (47%), Gaps = 20/341 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +++  L N+ R+ DA  L+ N++    ++P                    F AL+ A  +
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIE-RKINP----------------NVVTFSALIDAFVK 337

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G    A  +  ++  +     I  +++ ++     + +     +++ M+S     NV T
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I   CK  ++EE + L+  M + G+  N V +N +I    Q GD + A K+F+KM 
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM- 456

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
               D V P+ +T++ +++G CK G++E A  +   + K+ ++ ++ TY  +I+G  + G
Sbjct: 457 --VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E+   L   +  +G+ PN ++Y + I     +G  E A  +  +M +    PD   Y+
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 574

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            L +   R+G    + +L  ++     VGDA + +++IN L
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 252/507 (49%), Gaps = 20/507 (3%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++  +V  R + DA++ +   M    +SP        D+Y +          L+    Q+
Sbjct: 127 LLSAIVKMRHYHDAVISLSKQMELAGLSP--------DTYTL--------HMLINCFFQL 170

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
              +  + V+ K+   G  ++I  +N  ++ L K+ + G+  +L+ +MV+ GY  +V+T+
Sbjct: 171 QRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTY 230

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I  LCK  +   A  L+ +M ++G  P+VV ++ II+  C+   +  AL +F     
Sbjct: 231 TTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF---SY 287

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    + PN  T+N +I G C   R   A  +   M+   I  N+ T++ LI+ + + G+
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  +   M + G+ PN V Y+S ++    + +V  A  +   MI K   PD F+Y+I
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+   + +A +L N+++ + +  D  SYN LI+ LC+   L  A  L  +M+  G
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +PD+ TY  L+DG+CK G +  A +++  M+    KPN+V+YN +I+ +CK  +L  A+
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 527

Query: 520 SLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L       GL   +  Y T+ING    G + EA   F  M   G   N+  YN++I   
Sbjct: 528 KLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVT 605
            +     +A +L+  M   G + D  T
Sbjct: 588 LQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 238/472 (50%), Gaps = 4/472 (0%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           +++++ G S   +  +  ++   +L  +   + +  +++  G    + TFN +I  LCK 
Sbjct: 146 KQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKV 205

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            K  +A+ L+  M+  G  P+V  +  IIN  C++G+   A  LFRKMG        P+ 
Sbjct: 206 GKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQ---PDV 262

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT++ II+  CK  RV  A +I   M   GI  N+ TY +LI G        EA  + +E
Sbjct: 263 VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNE 322

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+   +MPN V ++  I+    EG+V  A  VL  M +  + P+  TYS L  G      
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V +A KL + ++ +    D +SYNILIN  CK+  +  AKQL + MI +GL PDI++Y T
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG C+ G +  A  +++NM      P+L  Y+ +++G CK   L  A  L +A Q   
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  + + YN LI+    +  + EA  +FSE+   G+  N   Y  +IN LCK G   +A 
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           E  + M   G  P+  +Y  ++  F ++      ++L  +M   G   D  T
Sbjct: 563 EAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 241/480 (50%), Gaps = 5/480 (1%)

Query: 181 IHAWNNFLSHLVKLNEI-GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           I  +N  LS +VK+         L K+M   G   +  T +++I    +  +++   S+ 
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +++K G+   +V FN +IN  C+VG    A++LF  M V  G    P+  T+  IING 
Sbjct: 181 AKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM-VARGYQ--PDVHTYTTIINGL 237

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A  +   M +AG   +V TY+T+ID   +     EAL +   M  +G+ PN 
Sbjct: 238 CKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNI 297

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS I  L        A  +L++M+  +I P+  T+S+L    C+ G V +A  +   
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E  +  +  +Y+ L+N       +  A++L   MI +G  PD+ +Y  LI+GYCK   
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNT 538
           I  A Q++  M      P++V YN++I+GLC+   L  A  L +     G L D  TY+ 
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G+   G +A+AF +F  M++  +  N V YNILI+ +CK    ++AR+L   + + G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + P+   YTT++    K    +E +E   +M   G  P+  +YN II   L  K     V
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 222/426 (52%), Gaps = 3/426 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++AL+ +  ML     P ++ FN +++   ++     A+    K   ++G S  P++ T
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLS--PDTYT 159

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            + +IN F +L RV+    +   +IK G+   + T+ TLI+G  + G   +A+ L D+MV
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            RG  P+   Y + I+ L   G+   A  +   M +    PD  TYS +   LC++  V 
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  + + +  + +  + ++YN LI  LC  +    A  +L+ M+   ++P+I+T+  LI
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           + +CK GN+  A  V + M ++  +PN+V Y+S++NG    A +  A+ L       G  
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCK 399

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  +YN LINGY    +I EA  +F+EM + G+  + V YN LI+ LC+ G  ++A +L
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 459

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            K M+ +G +PD  TY+ L+  F K     +   L   M  + + P+   YN +I  +  
Sbjct: 460 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 519

Query: 651 EKSAED 656
            ++ ++
Sbjct: 520 SRNLKE 525



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +  ++ L+    Q+G    A+D+ + +   G+   +  ++  L    K   + + ++
Sbjct: 434 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFR 493

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++ M S     N+  +N++I A+CK   L+EA  L+  +   G+ PNV  +  IIN  C
Sbjct: 494 LFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLC 553

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G L+ AL+ FR M     D   PN  ++N II GF +      A ++   M + G   
Sbjct: 554 KEGLLDEALEAFRNM---EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVA 610

Query: 323 NVRTYA 328
           +V T A
Sbjct: 611 DVATTA 616


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 255/530 (48%), Gaps = 35/530 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  ++    ++G+ E A  +  ++   G   ++  +N+ L  L+  N+      LY  M
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC-------------- 253
              G + NV T+N+++ ALCK  +++ A  L+  M   G  P+ V               
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230

Query: 254 ----------------FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
                           +N +I+  C+ G +E A+KL   +G M  + V PN V+++CIIN
Sbjct: 231 DDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKL---LGEMMDNGVDPNVVSYSCIIN 287

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             C  G VE A  +   M   G D N+ T+  LI G    G   EAL L   M++ G  P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V YN+ IH L + G +E AL V   M      P+  TYSIL  G  ++G +  A +  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           N+++      +  +Y  +++ LCK++    A  L+  M + G  P+ IT+ T I G C  
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGN 467

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
           G +E A+++ E M+     PN+  YN +++ L +    + A  L Q  +   L  + +TY
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM-KVMI 595
           NT++ G+   G + EA  +F +    G A + + YN +I+  CK G  + A +L+ +V  
Sbjct: 528 NTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +    PD +TYT+L+       + EE +   D  +  G+ P+  T+NA++
Sbjct: 588 MKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 215/449 (47%), Gaps = 9/449 (2%)

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S  +    +T+ ++I  L +EC+++    +  +M   GI      F  IIN   +VG  E
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            ALK+F ++G        P    +N +++      + +    +   M K G+  NV TY 
Sbjct: 127 QALKMFYRIGEFGCK---PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN 183

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+    +    + A +L  EM  +G  P+ V Y + +  L   G ++ A       +  
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA-----RELAG 238

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P    Y+ L  G+C+ G ++ A KL  ++++  +  +  SY+ +IN LC S N+  A
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L + M +RG   +I T+  LI G    G +  A+ +++ M +   +PN+V YN++I+G
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC + SL+ A  +    QR G L +  TY+ LI+G+  +G +  A   ++ M + G   N
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y  +++ LCK   + QA  L++ M L G  P+ +T+ T +     N   E  ++L +
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            M   G  P+  TYN ++  L      E+
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEE 507



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 211/475 (44%), Gaps = 57/475 (12%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIIN-------EACQVGDLEFALKLFRKMG-VMSGD 283
           L+E  SL  ++ K  I P V+  N IIN       +  Q  D+   LK  R +  V+   
Sbjct: 3   LKEGRSLLMKIQKPLI-PFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFF 61

Query: 284 SVLPNS-------VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           S + NS        T+  +I    +   ++  + I   M   GI+C    +  +I+GY R
Sbjct: 62  SAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKR 121

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            GS+E+AL++   + + G  P   +YN  +  L +E   +    + ++M    + P+ FT
Sbjct: 122 VGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFT 181

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+IL K LC+N  V  A KL  ++  +    DA +Y  +++ LCK+  +  A++L     
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-- 239

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK----- 511
                P +  Y  LIDG CK G IE A+++   M      PN+V Y+ IIN LC      
Sbjct: 240 ---FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296

Query: 512 --------------DASLDAAKSLLQASQRIGLL-----------------DAITYNTLI 540
                         DA++     L++     G L                 + + YNTLI
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G   NG + EA  +  +M+  G   N   Y+ILI+   K G    A E    MI HG  
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCR 416

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           P+ VTYT +V    KN   ++   L + M L G +P+  T+N  I  L G    E
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 127/249 (51%), Gaps = 6/249 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    +    + A  +++K+ ++G + +   +N F+  L     +    
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAM 474

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL + M   G + N+ T+N ++ AL +  K EEA  L+  +    + PN+V +N ++   
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI--RYAMIKAG 319
            + G +  AL+LF K  ++ G +  P+S+T+N +I+ +CK G+V+ A ++  R + +K  
Sbjct: 535 SRAGMMGEALQLFGK-ALVRGTA--PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              ++ TY +LI G     + EEA+   D+ + +G+ PN   +N+ +   F      G +
Sbjct: 592 -HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPI 650

Query: 380 FVLSDMIDK 388
            +L D++ K
Sbjct: 651 HILDDILRK 659


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 266/545 (48%), Gaps = 33/545 (6%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSP-----KLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
           +  + PSL+   V  VV    ++P     +    F+ ++     F  ++E+   +   L 
Sbjct: 73  IRNVLPSLS---VRHVVDLINRNPLSLPHRSIFAFFKFISSQPEFRFTVETYFVMARFLA 129

Query: 106 NWRRFDDALLLMGNLMS---ANSVSPLEFLEGLLDSYEICKATPA---VFDALVRACTQI 159
               F +A  L+  ++S    NS S       +  S    + TP    + DAL+     +
Sbjct: 130 IHEMFVEAQSLIELVVSRKGKNSAS------SVFISLVEMRGTPMCDFLVDALMITYMDL 183

Query: 160 GATEGAYDVIQKLKV-KGHS--VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
           G      DVIQ  ++ + H+  V I    N L  ++KLN  G  W  Y E++  G+  NV
Sbjct: 184 GFIP---DVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNV 240

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
             FN+++   CKE  + +A  ++  + K  + P VV FN +IN  C+VG+L+     FR 
Sbjct: 241 YVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVG---FRL 297

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
              M      P+  T++ +IN  CK  +++ A  + Y M + G+  N   + TLI G++R
Sbjct: 298 KHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSR 357

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G  +       +M+ +GL P+ V+YN+ ++     GD+  A  ++  MI + + PD  T
Sbjct: 358 NGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVT 417

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ L  G CR G V  A ++  ++ +  +  D   ++ LI  +CK   +  A++ L  M+
Sbjct: 418 YTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREML 477

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G+ PD +TY  ++D +CK G+ +   ++ + M+     PN+V YN ++NGLCK   + 
Sbjct: 478 RAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMK 537

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  LL A   +G++ D ITYNTL+ G+    + A A   + +   +GI  +   Y  L+
Sbjct: 538 NADMLLDAMLNVGVVPDDITYNTLLEGHH---RHANASKHYKQKPEIGIVADLASYKSLV 594

Query: 576 NFLCK 580
           N L +
Sbjct: 595 NELYR 599



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 168/313 (53%), Gaps = 3/313 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E++  G   N  V+N  ++    EG++  A  V  ++  + + P   +++ L  G C+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVG 289

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            +   F+L + + +     D ++Y+ LIN LCK N +  A +L   M  RGLIP+ + + 
Sbjct: 290 NLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFT 349

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLI G+ + G I+   + Y+ M     +P++V+YN+++NG CK+  L AA++++    R 
Sbjct: 350 TLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D +TY TLI+G+   G +  A  +  EM   GI +++VG++ LI  +CK G    A
Sbjct: 410 GLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDA 469

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
              ++ M+  G+ PD VTYT ++  F K    +   +L  +M   G  P+  TYN +++ 
Sbjct: 470 ERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNG 529

Query: 648 L--LGEKSAEDQV 658
           L  LG+    D +
Sbjct: 530 LCKLGQMKNADML 542



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 170/332 (51%), Gaps = 1/332 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           ++ AG   NV  +  L++ + + G+  +A ++ DE+ KR L P  V +N+ I+     G+
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGN 290

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    +   M      PD FTYS L   LC+   +  A +L  ++ E  ++ +   +  
Sbjct: 291 LDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+   ++  +   K+    M+ +GL PDI+ Y TL++G+CK G++  A  + + M +  
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            +P+ V Y ++I+G C+   +D A  + +   + G+ LD + ++ LI G    G++ +A 
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
               EM   G+  + V Y ++++  CK G  Q   +L+K M   G IP+ VTY  L+   
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGL 530

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            K    +    L D M+  GV PD+ TYN ++
Sbjct: 531 CKLGQMKNADMLLDAMLNVGVVPDDITYNTLL 562



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 49/103 (47%)

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           +  + E+ + G  +N   +NIL+N  CK G    A+++   +    + P  V++ TL+  
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLING 284

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           + K  + +    L   M  S   PD  TY+A+I+ L  E   +
Sbjct: 285 YCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMD 327


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 251/496 (50%), Gaps = 7/496 (1%)

Query: 164 GAYDVIQKLKVKG---HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
           G  D    L  +G   H++ +  WN  ++   ++ +      +   M + G   +V  +N
Sbjct: 149 GQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYN 208

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            ++   C+  +++ A  +   M ++G+ PNV  +   I   C+   +E A  L+  M V 
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM-VR 267

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +G  VL + VT + ++ G C+ GR   A  +   M K G   N  TY TLID  A+ G  
Sbjct: 268 NG--VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRG 325

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +E L L  EMV RG++ + V Y + + WL  +G  +     L   +  ++ P+  TY++L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              LC+   V +A ++  ++ E+ +  +  +++ +IN   K   L  A +    M  RG+
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P+++TYGTLIDG+ K    + A++VY +M     K N  I +S++NGL ++  ++ A +
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L + +   GL LD + Y TLI+G F  G +  AF    E+ +  +  + V YN+ IN LC
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G +++A+  +  M   G+ PD  TY T++    +     + ++L  +M +S + P+  
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 640 TYNAIISPLLGEKSAE 655
           TYN +++ L G  + E
Sbjct: 626 TYNTLVAGLFGTGAVE 641



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 244/502 (48%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              ALV    + G    AY + +++   G + +   +   +  L K         L  EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G V ++ T+  ++  L K+ K +E        L   + PN V + ++I+  C+  ++
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M      S+ PN VT + +INGF K G ++ A E +  M + GI+ NV TY
Sbjct: 396 DEAEQVLLEM---EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG+ +    + AL +  +M+  G+  N  + +S ++ L   G +E A+ +  D   
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  DH  Y+ L  GL + G +  AFK   ++++ +M+ DA  YN+ IN LC       
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK  L+ M   GL PD  TY T+I  +C+ G    A+++   MK    KPNL+ YN+++ 
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL    +++ AK LL      G    ++T+  ++     + ++     +   M N G+  
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN L+  LC  G  ++A  +++ M+  GI PD +T+  L+    K+   +     +
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
             M+   +SP+  T+N ++  L
Sbjct: 753 AQMLHQNISPNIATFNTLLGGL 774



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 234/498 (46%), Gaps = 4/498 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F +++    + G  + A +  + +K +G + ++  +   +    K        ++Y +M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N    + ++  L +  K+EEA++L+     SG+  + V +  +I+   + GD+
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A K  +++      ++LP++V +N  IN  C LG+ + A+     M   G+  +  TY
Sbjct: 536 PTAFKFGQEL---MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I  + R G + +AL+L  EM    + PN + YN+ +  LF  G VE A ++L++M+ 
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P   T+  + +   ++  +     +H  ++   +  D   YN L+  LC       
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+  G+ PD IT+  LI G+CK  +++ A   Y  M      PN+  +N+++ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL     +  A ++L   ++ GL  + +TY+ L  G+       EA  ++ EM   G   
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               YN LI+   K G   QA+EL K M   G+ P   TY  LV+ +S+  +  EV +  
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL 892

Query: 627 DDMVLSGVSPDNQTYNAI 644
            DM   G SP   T + I
Sbjct: 893 KDMKEKGFSPSKGTLSFI 910



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 146/297 (49%), Gaps = 5/297 (1%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           R   P  V YN     L A  D   A  VL++M  + +  D  T + L  GLCRNG V  
Sbjct: 97  RSSRPTTVAYNI---LLAALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  L ++    H + D   +N LI   C+  +  AA  +   M  +GL  D++ Y TL+ 
Sbjct: 154 AAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LL 531
           G+C+ G ++ A  V + MK+    PN+  Y   I   C+   ++ A  L +   R G LL
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D +T + L+ G   +G+ +EA+A+F EM  VG A N V Y  LI+ L K G  ++   L+
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             M+  G++ D VTYT L+    K    +EV +     +   +SP+  TY  +I  L
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 173/394 (43%), Gaps = 15/394 (3%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N ++   C++  L  A+ L R        S  P +V +N ++     L     A  +  
Sbjct: 76  LNALLYSHCRLRLLRPAIALLR--------SSRPTTVAYNILL---AALSDHAHAPAVLA 124

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV-YNSTIHWLFAE 372
            M K G+  +  T  TL+ G  R G  + A  L D     G+   +V+ +N+ I      
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRV 182

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           GD   AL V   M  + +  D   Y+ L  G CR G V  A  + + + E  +  +  +Y
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              I Y C++  +  A  L   M+  G++ D++T   L+ G C+ G    A  ++  M K
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
           V   PN V Y ++I+ L K        SLL +   R  ++D +TY  L++     GK  E
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
                    +  ++ N V Y +LI+ LCK     +A +++  M    I P+ VT+++++ 
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            F K    ++  E    M   G++P+  TY  +I
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 178/415 (42%), Gaps = 38/415 (9%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G    A+   Q+L  +        +N F++ L  L +         EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   + +T+N +I + C++ +  +AL L + M  S I PN++ +N ++      G +E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L  +M V +G S  P+S+TH  ++    +  R++   +I   M+ AG+  ++  Y 
Sbjct: 642 KAKYLLNEM-VSAGFS--PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI---------------------- 366
           TL+      G + +A  + +EM+  G+ P+ + +N+ I                      
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 367 -------------HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
                          L + G +  A  VL +M    + P++ TY IL  G  +     +A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L+ +++ +  V    +YN LI+   K+  +  AK+L   M  RG+ P   TY  L+ G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           + +  N     +  ++MK+    P+    + I     K      A+ LL+   R+
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 8/221 (3%)

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  S N L+   C+   L  A  LL     R   P  + Y  L+       +   A  V 
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSDHAH---APAVL 123

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFING 547
             M K     + V  N+++ GLC++  +DAA +L      I  LD I +NTLI GY   G
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVG 183

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
               A ++   M   G+ ++ VGYN L+   C+ G    AR ++ +M   G+ P+  TYT
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +  + +    EE  +L++ MV +GV  D  T +A+++ L
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGL 284



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 10/201 (4%)

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           A A   L++  +R    D  +   L+  +C+   +  A+ +  +      +P  V YN +
Sbjct: 55  ALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRS-----SRPTTVAYNIL 109

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI- 564
           +  L   A   A   L +  +R    D +T NTL+ G   NG++  A A+    R  GI 
Sbjct: 110 LAALSDHAHAPAV--LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIH 165

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           A++ +G+N LI   C+ G    A  +   M   G+  D V Y TLV  F +    +    
Sbjct: 166 ALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARG 225

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           + D M  +GV P+  TY   I
Sbjct: 226 VLDMMKEAGVDPNVATYTPFI 246


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 243/480 (50%), Gaps = 7/480 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     ++  L+ A ++    + A  +++++ + G    ++ +N  +    +LN +    
Sbjct: 241 CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGA 300

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL   M+  G+  N  T+  +++ LCK C+++EA +L  ++      PNVV FN ++N  
Sbjct: 301 KLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPNVVHFNTLVNGF 356

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A        + +G   +P+  T + ++NG CK G    A E+   M   G  
Sbjct: 357 VRNGRLNEATAFVYDKMINNG--YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCK 414

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+ TY  LIDG+ + G  EEA  +  EM+ +G   N V YN+ I  L   G +  AL +
Sbjct: 415 PNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDM 474

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  K   PD FT++ L  GLCR   ++ A  L+  ++ E ++ ++ ++N LI+   +
Sbjct: 475 FGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLR 534

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A +L++ M+ RG   D ITY  LI   CK G +E  + ++E M +    P+++ 
Sbjct: 535 RGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIIT 594

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            N +ING C    +  A   ++     G   D +TYN+LING    G+I EA  +F +++
Sbjct: 595 CNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQ 654

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  + + YN LI +LC+ G +  A  L+   + +G +P+ VT+  LV  F K  + E
Sbjct: 655 AEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 280/605 (46%), Gaps = 36/605 (5%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIV-------------HLLVNWRR----FDDALLLMGN 119
           ++E + W G    + HS      ++              LL+  +     F ++L ++  
Sbjct: 87  SMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIM 146

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPA------VFDALVRACTQIGATEGAYDVIQKLK 173
                +  P +    LLD   +    P+      V D LV       A+   YD++ K  
Sbjct: 147 KYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK-- 204

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
             G S + + +   +  L  +NE+     L ++M   G V N   +  +I AL K  +++
Sbjct: 205 --GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVD 262

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EAL L   M   G  P+V  FN +I   C++  +    KL  +M ++ G +  PN +T+ 
Sbjct: 263 EALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRM-ILKGFT--PNDMTYG 319

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC-DEMVK 352
            +++G CK  R++ A+    A++      NV  + TL++G+ R G   EA     D+M+ 
Sbjct: 320 YLMHGLCKTCRIDEAQ----ALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMIN 375

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G +P+   +++ ++ L  +G    AL +++DM  K   P+  TY+IL  G C+ G +++
Sbjct: 376 NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEE 435

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  +  ++L +    +   YN LI+ LCK   +  A  +   M  +G  PDI T+ +LI 
Sbjct: 436 AGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIF 495

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G C+   +E A+ +Y +M       N V +N++I+   +   +  A  L+      G  L
Sbjct: 496 GLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPL 555

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D ITYN LI      G + +   +F EM   G+  + +  NILIN  C  G    A E M
Sbjct: 556 DEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFM 615

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + MI  G  PD VTY +L+    K    +E + L + +   G+ PD+ TYN +I  L  E
Sbjct: 616 RDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCRE 675

Query: 652 KSAED 656
            + +D
Sbjct: 676 GAFDD 680



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 197/403 (48%), Gaps = 18/403 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD--------- 150
           ++H L    R D+A  L+  +   N V     + G + +  + +AT  V+D         
Sbjct: 321 LMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380

Query: 151 ------ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
                  LV    + G    A +++  +  KG   +++ +   +    K  ++     + 
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           +EM++ G+  N   +N +I ALCK  K+ EAL ++  M   G  P++  FN +I   C+V
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
            ++E AL L+R M V+ G  V+ NSVT N +I+ F + G ++ A ++   M+  G   + 
Sbjct: 501 DEMEDALALYRDM-VLEG--VIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDE 557

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LI    + G+ E+ L L +EM+++GL P+ +  N  I+     G V  AL  + D
Sbjct: 558 ITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRD 617

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           MI +   PD  TY+ L  GLC+ G +++A  L  ++  E +  D+ +YN LI +LC+   
Sbjct: 618 MIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGA 677

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
              A  LL   +  G +P+ +T+  L+  + K  N EG    Y
Sbjct: 678 FDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITY 720


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 258/518 (49%), Gaps = 6/518 (1%)

Query: 60  NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           N L  +++S    +P L L +YTW+ +N   S SLE +  ++H L N +R+      +  
Sbjct: 68  NELFRQLISS-ELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDG 126

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
            +   S   +  +   +   +       + D LV A       E  ++  ++    G+ +
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S  +    +  L+K N       LYKEM+      NV TFN+VI ALCK  K+ +A  + 
Sbjct: 187 SAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M   G  PNVV +N +I+  C++G      K    +  M  + V PN  T N +I+GF
Sbjct: 247 EDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGF 306

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            K   +  + ++   M+   +  NV TY +LI+G   GG   EA+ + D+MV  G+ PN 
Sbjct: 307 WKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNL 366

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y+S I+     G ++ AL +   +  +   P    Y++L    C+ G +   F L  +
Sbjct: 367 ITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEE 426

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +  E +V D  +YN LI  LC++ N+ AAK+L   +  +GL PD++T+  L++GYC  G 
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGE 485

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA---KSLLQASQRIGLLDAITY 536
              A  + + M K+  KP  + YN ++ G CK+ +L AA   ++ ++  +R+  ++  +Y
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRL-RMNVASY 544

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           N L+ GY   GK+ +A  + +EM   G+  N++ Y I+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 192/376 (51%), Gaps = 4/376 (1%)

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR-GGSSE-- 341
           + PN  T N +IN  CK G++  A ++   M   G   NV +Y TLIDGY + GG+ +  
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +A  +  EMV+  + PN   +N  I   + + ++ G+L V  +M+D+ + P+  TY+ L 
Sbjct: 279 KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLI 338

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GLC  G + +A  + ++++   +  +  +Y+ LIN  CK+  +  A  +  S+  +G  
Sbjct: 339 NGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTR 398

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P    Y  LID YCK G I+    + E M++    P++  YN +I GLC++ +++AAK L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                  GL D +T++ L+ GY   G+  +A  +  EM  +G+    + YNI++   CK 
Sbjct: 459 FDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKE 518

Query: 582 GCYQQARELMKVMILHGIIP-DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           G  + A  +   M     +  +  +Y  L+  +S+    E+   L ++M+  G+ P+  T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578

Query: 641 YNAIISPLLGEKSAED 656
           Y  +   ++ +    D
Sbjct: 579 YEIVKEEMVDKGFVPD 594



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 178/367 (48%), Gaps = 5/367 (1%)

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           D+V  NS+  + ++  +    R E   E        G   +  +   L+    +   S +
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSAD 206

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
              L  EM++R + PN   +N  I+ L   G +  A  V+ DM      P+  +Y+ L  
Sbjct: 207 VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLID 266

Query: 403 GLCR---NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           G C+   NG + +A  +  +++E  +  +  ++NILI+   K +NL  + ++   M+ + 
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQD 326

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +IP++ITY +LI+G C GG I  A+ + + M     +PNL+ Y+S+ING CK+  +  A 
Sbjct: 327 VIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEAL 386

Query: 520 SLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +  + +  G       YN LI+ Y   GKI + FA+  EM   GI  +   YN LI  L
Sbjct: 387 DMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C+ G  + A++L   +   G+ PD VT+  L+  +       +   L  +M   G+ P +
Sbjct: 447 CRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRH 505

Query: 639 QTYNAII 645
            TYN ++
Sbjct: 506 LTYNIMM 512



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 165/347 (47%), Gaps = 32/347 (9%)

Query: 322 CNVRTYA---TLIDGYARGGSSEE------ALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
            N + Y+   + +DG+ R GS  +      A+ +CD          NV  NS I  +   
Sbjct: 112 ANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCD----------NVCVNSIIADMLVL 161

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSI-------LTKGLCRNGCVKQAFKLHNQVLEEHM 425
                + F L    +      ++ Y +       L   L +         L+ +++   +
Sbjct: 162 AYANNSRFELG--FEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKI 219

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK-GGN--IEG 482
             + +++N++IN LCK+  +  A+ ++  M V G  P++++Y TLIDGYCK GGN  +  
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYK 279

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-KSLLQASQRIGLLDAITYNTLIN 541
           A  V + M + E  PNL  +N +I+G  KD +L  + K   +   +  + + ITYN+LIN
Sbjct: 280 ADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLIN 339

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    GKI EA  M  +M + G+  N + Y+ LIN  CK G  ++A ++   +   G  P
Sbjct: 340 GLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRP 399

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               Y  L+  + K    ++   L ++M   G+ PD  TYN +I+ L
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 169/401 (42%), Gaps = 108/401 (26%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           LM  L+  N  + +E+L   +   +I +     F+ ++ A  + G    A DV++ +KV 
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKI-QPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGR-----------------------------FWK---- 202
           G+S ++ ++N  +    KL   G+                             FWK    
Sbjct: 253 GYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNL 312

Query: 203 -----LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
                ++KEM+    + NV T+N +I  LC   K+ EA+ +  +M+ +G+ PN++ ++ +
Sbjct: 313 PGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSL 372

Query: 258 INEACQVGDLEFALKLFR----------------------KMGV----------MSGDSV 285
           IN  C+ G ++ AL +F                       K+G           M  + +
Sbjct: 373 INGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +P+  T+NC+I G C+ G +E A+++   +   G+  ++ T+  L++GY   G S +A  
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAM 491

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDV------------------------------ 375
           L  EM K GL P ++ YN  +     EG++                              
Sbjct: 492 LLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551

Query: 376 ------EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
                 E A  +L++M++K + P+  TY I+ + +   G V
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 275/558 (49%), Gaps = 5/558 (0%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSP-LEFLEGLLDSYEICKATPAV 148
           F H+ ES C +VH+L   R +  A  ++  L+ ++ V P  +  E L  +  +C     V
Sbjct: 5   FRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGV 64

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           FDAL     ++G  E A     ++          + N FL  L K  E       +++MV
Sbjct: 65  FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMV 124

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G    V T+N++I  +CKE  +  A SL+ +M K G+ P++V +N +I+   ++G L+
Sbjct: 125 GAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLD 184

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            ++ LF +M  M  +   P+ +T+N +IN FCK   +  A E    M    +  NV +Y+
Sbjct: 185 ESVCLFEEMKFMGCE---PDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYS 241

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLID   + G  + A++   +M + GL+PN   Y+S I      G++  A  +  +M+ +
Sbjct: 242 TLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE 301

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           H+  +  TY+ L  GLC  G + +A +L   + +  +  +  +Y  LI+   K  ++  A
Sbjct: 302 HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKA 361

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L + M  + + PDI+ +GT++ G C    +E    +   MK+     N VIY ++++ 
Sbjct: 362 MELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDA 421

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
             K  +   A +LL+  + +G  +  +T+  LI+G    G + EA   F  M +  +  N
Sbjct: 422 YFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPN 481

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              Y  LI+ LCK  C   A++L   M    +IPD + YT ++    K+ + +E + + +
Sbjct: 482 VAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRN 541

Query: 628 DMVLSGVSPDNQTYNAII 645
            M+  G+  D   Y +++
Sbjct: 542 KMMEMGIELDLYAYTSLV 559



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 244/496 (49%), Gaps = 6/496 (1%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF  + ++    + G    A  + +++K  G +  I  +N  +    K+  +     L
Sbjct: 130 PTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCL 189

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           ++EM   G   +V T+N +I + CK   +  A   +  M    + PNV+ ++ +I+  C+
Sbjct: 190 FEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCK 249

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ A+K F  M  +    +LPN  T++ +I+  CK G +  A  +   M++  +D N
Sbjct: 250 EGMMQMAIKFFVDMTRVG---LLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLN 306

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + TY TL+DG    G   EA  L   M K G+ PN   Y + IH       ++ A+ + +
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M +K I PD   +  +  GLC    +++   +  ++ E  +  +   Y  L++   K+ 
Sbjct: 367 EMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N   A  LL  M   G    ++T+  LIDG CK G ++ A+  +  M   + +PN+ +Y 
Sbjct: 427 NRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYT 486

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+GLCK+  +  AK L    Q   ++ D I Y  +I+G   +G   EA  M ++M  +
Sbjct: 487 ALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEM 546

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           GI ++   Y  L+  L + G  QQAR+ +  MI  GIIPD    T L+ +  +  + +E 
Sbjct: 547 GIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEA 606

Query: 623 IELHDDMVLSGVSPDN 638
           IEL +++V  G+   N
Sbjct: 607 IELQNELVEKGLIHGN 622



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 206/470 (43%), Gaps = 39/470 (8%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V     F+ +   L +   LE A   + RM K  + P     N  ++   + G+ + +  
Sbjct: 59  VPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD 118

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
            FR M    G  + P   T+N +I   CK G +  A  +   M K G+  ++ TY TLID
Sbjct: 119 FFRDM---VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLID 175

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GY + G  +E++ L +EM   G  P+ + YN+ I+       +  A     +M DK + P
Sbjct: 176 GYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKP 235

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  +YS L   LC+ G ++ A K    +    ++ + ++Y+ LI+  CK+ NL  A  L 
Sbjct: 236 NVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLA 295

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M+   +  +I+TY TL+DG C+ G +  A +++  M K    PNL  Y ++I+G  K 
Sbjct: 296 DEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV 355

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
            S+D A  L    +   +  D + + T++ G     K+ E   + +EM+  GI  N V Y
Sbjct: 356 RSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIY 415

Query: 572 NI-----------------------------------LINFLCKFGCYQQARELMKVMIL 596
                                                LI+ LCK G  Q+A      M  
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPD 475

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           H + P+   YT L+    KN    +  +L D+M    + PD   Y A+I 
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMID 525



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 195/401 (48%), Gaps = 4/401 (0%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P    F+ + +   ++G LE A + F +M   +   VLP + + N  ++   K G  + +
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRM---TKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M+ AGI   V TY  +I    + G    A  L ++M K GL P+ V YN+ I  
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G ++ ++ +  +M      PD  TY+ L    C+   + +AF+   ++ ++ +  +
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY+ LI+ LCK   +  A +    M   GL+P+  TY +LID  CK GN+  A  + +
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
            M +     N+V Y ++++GLC++  ++ A+ L +A  + G+   +  Y  LI+G+    
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
            + +A  +F+EMR   I  + + +  ++  LC     ++ + +M  M   GI  + V YT
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           TL+  + K  +  E I L ++M   G      T+ A+I  L
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGL 457



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 152/308 (49%), Gaps = 1/308 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M K  ++P     N+ +H L   G+ + +     DM+   I P  FTY+I+   +C+ G 
Sbjct: 88  MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGD 147

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A  L  Q+ +  +  D  +YN LI+   K   L  +  L   M   G  PD+ITY  
Sbjct: 148 MLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNA 207

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+ +CK   +  A + +  MK  + KPN++ Y+++I+ LCK+  +  A        R+G
Sbjct: 208 LINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           LL +  TY++LI+     G + EAF +  EM    + +N V Y  L++ LC+ G   +A 
Sbjct: 268 LLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAE 327

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           EL + M   G+ P+   YT L+    K  S ++ +EL ++M    + PD   +  I+  L
Sbjct: 328 ELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGL 387

Query: 649 LGEKSAED 656
             E   E+
Sbjct: 388 CSESKLEE 395



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 7/286 (2%)

Query: 368 WLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           W+    DV   L+       +++C P    +  L   L   G ++ A +   ++ +  ++
Sbjct: 40  WVLPGSDVFEILWT-----TRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVL 94

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
             A S N  ++ L K+     ++     M+  G+ P + TY  +I   CK G++  A  +
Sbjct: 95  PKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSL 154

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           +E MKK+   P++V YN++I+G  K   LD +  L +  + +G   D ITYN LIN +  
Sbjct: 155 FEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCK 214

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
              +  AF  F EM++  +  N + Y+ LI+ LCK G  Q A +    M   G++P+  T
Sbjct: 215 FKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFT 274

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           Y++L+    K  +  E   L D+M+   V  +  TY  ++  L  E
Sbjct: 275 YSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEE 320



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/199 (19%), Positives = 85/199 (42%), Gaps = 5/199 (2%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           + N    +  LE + D     + T   F AL+    + G  + A     ++       ++
Sbjct: 425 AGNRTEAINLLEEMRDLG--TEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             +   +  L K N IG   KL+ EM     + +   +  +I    K    +EAL++  +
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ GI  ++  +  ++    Q G ++ A K   +   M G  ++P+      ++    +
Sbjct: 543 MMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAE---MIGKGIIPDETLCTRLLRKHYE 599

Query: 302 LGRVEFAEEIRYAMIKAGI 320
           LG ++ A E++  +++ G+
Sbjct: 600 LGNIDEAIELQNELVEKGL 618


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 296/616 (48%), Gaps = 48/616 (7%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEG 134
           K  L+F+++  +N +F  ++ S C ++ LL+       A   +  L+  N+ +PL+  + 
Sbjct: 92  KTTLDFFSFASKNFKFRFTVRSYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDA 151

Query: 135 LLDS-----YEICKATPAVFDALVRA-CTQIG--ATEGAYDVIQKLKVKGHSVSIHAWNN 186
            L        E+ + +    D L+   C+Q        A+D       KG   S+ + N 
Sbjct: 152 RLSEIASAFLELGERSHGELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNF 211

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +S LVK NE+ + ++++  M   G + +V T+   I A CK  K++EA+ L+ +M + G
Sbjct: 212 LMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGG 271

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PNVV +N +I+  C+ G LE AL +F+  G M  + V P+ VT+  ++NG  K  + +
Sbjct: 272 VLPNVVTYNNLIDGLCKSGRLEEAL-MFK--GRMVENKVNPSLVTYGILVNGLVKFEKFD 328

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS-- 364
            A  +   M   G   N   +  LIDGY+R G+ ++ALR+ D+M  +GL PN V +N+  
Sbjct: 329 EANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLL 388

Query: 365 ---------------------------------TIHWLFAEGDVEGALFVLSDMIDKHIC 391
                                             +H L      + AL ++  ++ ++I 
Sbjct: 389 QGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIK 448

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQ 450
            +    ++L  GLC+ G   +A  L  ++ ++  +  +  + N L+  LC+  N+     
Sbjct: 449 VNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFP 508

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   M+ RGL+ D I+Y TLI G CK G IE A ++ E M K   KP+   YN ++ GL 
Sbjct: 509 VCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLA 568

Query: 511 KDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
               +D    +L  ++  G++  I TY  ++ GY    +I  A ++F+++    + ++ V
Sbjct: 569 DKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYV 628

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YNILI    K G + +A +L   M    I P   TY++++     N   EE   + ++M
Sbjct: 629 VYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEM 688

Query: 630 VLSGVSPDNQTYNAII 645
              G+ P+   Y A+I
Sbjct: 689 RNEGLMPNVFCYTALI 704



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 262/554 (47%), Gaps = 30/554 (5%)

Query: 64  NRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
           N ++    KS +L  AL F   + EN + + SL +   +V+ LV + +FD+A  ++   M
Sbjct: 280 NNLIDGLCKSGRLEEALMFKGRMVEN-KVNPSLVTYGILVNGLVKFEKFDEANSVLVE-M 337

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
            +   SP EF                VF+AL+   ++ G  + A  V   + +KG   + 
Sbjct: 338 YSKGFSPNEF----------------VFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNA 381

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
              N  L    + N++ +  ++ + ++S     N +  + V++ LCK  K + AL +   
Sbjct: 382 VTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKA 441

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           +L   I  N     +++   C+ G    A+ L+ ++    G  +  N+ T N ++ G C+
Sbjct: 442 LLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKG--LAANTTTSNALLYGLCE 499

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            G +E    +   M++ G+  +  +Y TLI G  + G  EEA +L ++M+K+G  P+   
Sbjct: 500 RGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYT 559

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  +  L  +G ++    VL +  D  + P+ +TY+++ +G C    +  A  L N+++
Sbjct: 560 YNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLV 619

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +      YNILI    K+ N   A +L  +M    + P I TY ++I G C    +E
Sbjct: 620 YNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVE 679

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLI 540
            A  ++E M+     PN+  Y ++I G CK   +D  +S+LQ  +      + ITY  +I
Sbjct: 680 EAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMI 739

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +GY   G   EA  + +EM   GI+ + V Y +L    CK        EL + +     +
Sbjct: 740 DGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCK------ENELEETLQGDTAV 793

Query: 601 P-DYVTYTTLVTRF 613
           P + +TYTTLV + 
Sbjct: 794 PLEEITYTTLVDKL 807



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 192/386 (49%), Gaps = 4/386 (1%)

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F    + +   V P+  + N +++   K   +  +  +  AM + G+  +V TYAT I+ 
Sbjct: 191 FDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINA 250

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           Y +GG  +EA+ L  +M + G++PN V YN+ I  L   G +E AL     M++  + P 
Sbjct: 251 YCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPS 310

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY IL  GL +     +A  +  ++  +    + + +N LI+   +  N+  A ++  
Sbjct: 311 LVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRD 370

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M ++GL P+ +T+ TL+ G+C+   +E A QV E +       N    + +++ LCK +
Sbjct: 371 DMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSS 430

Query: 514 SLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN-VGIAVNKVG 570
             D+A  +++A   + I + D++    L+ G    GK  EA  ++  + +  G+A N   
Sbjct: 431 KFDSALKIVKALLLRNIKVNDSL-LTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTT 489

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
            N L+  LC+ G  ++   + K M+  G++ D ++Y TL+    K+   EE  +L + M+
Sbjct: 490 SNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMM 549

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G  PD  TYN ++  L  +   +D
Sbjct: 550 KQGFKPDTYTYNFLMKGLADKGKMDD 575


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 251/496 (50%), Gaps = 7/496 (1%)

Query: 164 GAYDVIQKLKVKG---HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
           G  D    L  +G   H++ +  WN  ++   ++ +      +   M + G   +V  +N
Sbjct: 149 GQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYN 208

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            ++   C+  +++ A  +   M ++G+ PNV  +   I   C+   +E A  L+  M V 
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM-VR 267

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +G  VL + VT + ++ G C+ GR   A  +   M K G   N  TY TLID  A+ G  
Sbjct: 268 NG--VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRG 325

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +E L L  EMV RG++ + V Y + + WL  +G  +     L   +  ++ P+  TY++L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              LC+   V +A ++  ++ E+ +  +  +++ +IN   K   L  A +    M  RG+
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P+++TYGTLIDG+ K    + A++VY +M     K N  I +S++NGL ++  ++ A +
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L + +   GL LD + Y TLI+G F  G +  AF    E+ +  +  + V YN+ IN LC
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G +++A+  +  M   G+ PD  TY T++    +     + ++L  +M +S + P+  
Sbjct: 566 MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 640 TYNAIISPLLGEKSAE 655
           TYN +++ L G  + E
Sbjct: 626 TYNTLVAGLFGTGAVE 641



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 244/502 (48%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              ALV    + G    AY + +++   G + +   +   +  L K         L  EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G V ++ T+  ++  L K+ K +E        L   + PN V + ++I+  C+  ++
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M      S+ PN VT + +INGF K G ++ A E +  M + GI+ NV TY
Sbjct: 396 DEAEQVLLEM---EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG+ +    + AL +  +M+  G+  N  + +S ++ L   G +E A+ +  D   
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  DH  Y+ L  GL + G +  AFK   ++++ +M+ DA  YN+ IN LC       
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK  L+ M   GL PD  TY T+I  +C+ G    A+++   MK    KPNL+ YN+++ 
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL    +++ AK LL      G    ++T+  ++     + ++     +   M N G+  
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN L+  LC  G  ++A  +++ M+  GI PD +T+  L+    K+   +     +
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
             M+   +SP+  T+N ++  L
Sbjct: 753 AQMLHQNISPNIATFNTLLGGL 774



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 219/465 (47%), Gaps = 4/465 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F +++    + G  + A +  + +K +G + ++  +   +    K        ++Y +M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N    + ++  L +  K+EEA++L+     SG+  + V +  +I+   + GD+
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A K  +++      ++LP++V +N  IN  C LG+ + A+     M   G+  +  TY
Sbjct: 536 PTAFKFGQEL---MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I  + R G + +AL+L  EM    + PN + YN+ +  LF  G VE A ++L++M+ 
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P   T+  + +   ++  +     +H  ++   +  D   YN L+  LC       
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+  G+ PD IT+  LI G+CK  +++ A   Y  M      PN+  +N+++ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL     +  A ++L   ++ GL  + +TY+ L  G+       EA  ++ EM   G   
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
               YN LI+   K G   QA+EL K M   G+ P   TY  LV+
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVS 877



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 146/297 (49%), Gaps = 5/297 (1%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           R   P  V YN     L A  D   A  VL++M  + +  D  T + L  GLCRNG V  
Sbjct: 97  RSSRPTTVAYNI---LLAALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  L ++    H + D   +N LI   C+  +  AA  +   M  +GL  D++ Y TL+ 
Sbjct: 154 AAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LL 531
           G+C+ G ++ A  V + MK+    PN+  Y   I   C+   ++ A  L +   R G LL
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D +T + L+ G   +G+ +EA+A+F EM  VG A N V Y  LI+ L K G  ++   L+
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             M+  G++ D VTYT L+    K    +EV +     +   +SP+  TY  +I  L
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDAL 389



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 178/404 (44%), Gaps = 38/404 (9%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  K    + D+LV    Q G  E A  + +     G S+    +   +  L K  ++  
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            +K  +E++    + +   +N+ I  LC   K +EA S    M   G+ P+   +N +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G+   ALKL  +M +    S+ PN +T+N ++ G    G VE A+ +   M+ AG
Sbjct: 598 SHCRKGETAKALKLLHEMKM---SSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              +  T+  ++   ++    +  L + + M+  GL  +  VYN+ +  L   G    A 
Sbjct: 655 FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM-------------- 425
            VL +M+   I PD  T++ L  G C++  +  AF  + Q+L +++              
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774

Query: 426 -----VGDA----------------YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
                +G+A                 +Y+IL     K +N   A +L   M+ +G +P +
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            TY  LI  + K G +  A +++++M+K    P    Y+ +++G
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 173/394 (43%), Gaps = 15/394 (3%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N ++   C++  L  A+ L R        S  P +V +N ++     L     A  +  
Sbjct: 76  LNALLYSHCRLRLLRPAIALLR--------SSRPTTVAYNILL---AALSDHAHAPAVLA 124

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV-YNSTIHWLFAE 372
            M K G+  +  T  TL+ G  R G  + A  L D     G+   +V+ +N+ I      
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRV 182

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           GD   AL V   M  + +  D   Y+ L  G CR G V  A  + + + E  +  +  +Y
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              I Y C++  +  A  L   M+  G++ D++T   L+ G C+ G    A  ++  M K
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
           V   PN V Y ++I+ L K        SLL +   R  ++D +TY  L++     GK  E
Sbjct: 303 VGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
                    +  ++ N V Y +LI+ LCK     +A +++  M    I P+ VT+++++ 
Sbjct: 363 VKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            F K    ++  E    M   G++P+  TY  +I
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 157/361 (43%), Gaps = 38/361 (10%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G    A+   Q+L  +        +N F++ L  L +         EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   + +T+N +I + C++ +  +AL L + M  S I PN++ +N ++      G +E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L  +M V +G S  P+S+TH  ++    +  R++   +I   M+ AG+  ++  Y 
Sbjct: 642 KAKYLLNEM-VSAGFS--PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TL+      G + +A  + +EM+  G+ P+ + +N+ I        ++ A    + M+ +
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 389 HICPD-----------------------------------HFTYSILTKGLCRNGCVKQA 413
           +I P+                                   + TY IL  G  +     +A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L+ +++ +  V    +YN LI+   K+  +  AK+L   M  RG+ P   TY  L+ G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 474 Y 474
           +
Sbjct: 879 W 879



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 8/222 (3%)

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  S N L+   C+   L  A  LL     R   P  + Y  L+       +   A  V
Sbjct: 71  ADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSDHAH---APAV 122

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFIN 546
              M K     + V  N+++ GLC++  +DAA +L      I  LD I +NTLI GY   
Sbjct: 123 LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRV 182

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G    A ++   M   G+ ++ VGYN L+   C+ G    AR ++ +M   G+ P+  TY
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           T  +  + +    EE  +L++ MV +GV  D  T +A+++ L
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGL 284



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 10/201 (4%)

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           A A   L++  +R    D  +   L+  +C+   +  A+ +  +      +P  V YN +
Sbjct: 55  ALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRS-----SRPTTVAYNIL 109

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI- 564
           +  L   A   A   L +  +R    D +T NTL+ G   NG++  A A+    R  GI 
Sbjct: 110 LAALSDHAHAPAV--LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIH 165

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           A++ +G+N LI   C+ G    A  +   M   G+  D V Y TLV  F +    +    
Sbjct: 166 ALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARG 225

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           + D M  +GV P+  TY   I
Sbjct: 226 VLDMMKEAGVDPNVATYTPFI 246


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 256/514 (49%), Gaps = 35/514 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS + K+N+      L ++M + G   N+ T++++I   C+  +L  AL++ 
Sbjct: 80  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM--SGDSVL----------- 286
            +M+K G  P++V  N ++N  C    +  A+ L  +M  M    DS             
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199

Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                              P+ VT+  ++NG CK G ++ A  +   M +  I+  V  Y
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID      +  +AL L  EM  +G+ PN V YNS I  L   G    A  +LSDMI+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I P+  T+S L     + G + +A KL++++++  +  D ++Y+ LIN  C  + L  
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK +   MI +   P+++TY TLI G+CK   ++  ++++  M +     N V Y ++I+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G  +    D A+ + +     G+L D +TY+ L++G   NGK+  A  +F  ++   +  
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YNI+I  +CK G  +   +L   + L G+ P+ VTYTT+++ F +    EE   L 
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559

Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
            +M   G  PD+ TYN +I   L  G+K+A  ++
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 228/463 (49%), Gaps = 33/463 (7%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+   I   N+ L+     N I     L  +MV  GY  +  TFN +I+
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM------- 277
            L +  +  EA++L  RM+  G  P++V + +++N  C+ GD++ AL L +KM       
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254

Query: 278 GV-------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
           GV                         M    + PN VT+N +I   C  GR   A  + 
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             MI+  I+ NV T++ LID + + G   EA +L DEM+KR + P+   Y+S I+     
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             ++ A  +   MI K   P+  TY+ L KG C+   V +  +L  ++ +  +VG+  +Y
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             LI+   ++     A+ +   M+  G++PDI+TY  L+DG C  G +E A+ V+E +++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
            + +P++  YN +I G+CK   ++    L  +    G+  + +TY T+++G+   G   E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           A A+F EM+  G   +   YN LI    + G    + EL++ M
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 225/455 (49%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +MV      ++  F+ ++ A+ K  K +  +SL  +M   GI  N+  ++++IN  C
Sbjct: 68  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  AL +  KM  +  +   P+ VT N ++NGFC   R+  A  +   M++ G   
Sbjct: 128 RRSQLSLALAVLAKMMKLGYE---PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  T+ TLI G  R   + EA+ L D MV +G  P+ V Y   ++ L   GD++ AL +L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M    I P    Y+ +   LC    V  A  L  ++  + +  +  +YN LI  LC  
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + A +LLS MI R + P+++T+  LID + K G +  A ++Y+ M K    P++  Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364

Query: 503 NSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +S+ING C    LD AK + +    +    + +TYNTLI G+    ++ E   +F EM  
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N V Y  LI+   +      A+ + K M+  G++PD +TY+ L+     N   E 
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + + + +  S + PD  TYN +I  +      ED
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A  +++K++       +  +N  +  L     +    
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM + G   NV T+N +I  LC   +  +A  L   M++  I PNVV F+ +I+  
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+  T++ +INGFC   R++ A+ +   MI     
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY TLI G+ +    +E + L  EM +RGL+ N V Y + IH  F   + + A  V
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC NG V+ A  +   +    M  D Y+YNI+I  +CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P+++TY T++ G+C+ G  E A  ++  MK+    P+   
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +    +   +   L+     +G++ ++F
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSF 625



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 148/309 (47%), Gaps = 38/309 (12%)

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A+ +  DM+     P    +S L   + +         L  Q+    +  + Y+Y+I
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM---- 490
           LIN  C+ + L+ A  +L+ M+  G  PDI+T  +L++G+C G  I  AV +   M    
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 491 -----------------------------KKVEK--KPNLVIYNSIINGLCKDASLDAAK 519
                                        + V K  +P+LV Y  ++NGLCK   +D A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 520 SLLQASQRIGLLD--AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           SLL+  ++ G ++   + YNT+I+       + +A  +F+EM N GI  N V YN LI  
Sbjct: 242 SLLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LC +G +  A  L+  MI   I P+ VT++ L+  F K     E  +L+D+M+   + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 638 NQTYNAIIS 646
             TY+++I+
Sbjct: 361 IFTYSSLIN 369



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 6/263 (2%)

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAAAKQLLSSMI 456
           S+L KG C  G    +F  H         G  Y Y  I IN L     L  A  L   M+
Sbjct: 18  SLLGKGKC--GTAPPSFS-HCSFWVRDFSGVRYDYRKISINRL-NDLKLDDAVNLFGDMV 73

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
                P I+ +  L+    K    +  + + E M+ +    NL  Y+ +IN  C+ + L 
Sbjct: 74  KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A ++L    ++G   D +T N+L+NG+    +I++A ++  +M  +G   +   +N LI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           + L +     +A  L+  M++ G  PD VTY  +V    K    +  + L   M    + 
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253

Query: 636 PDNQTYNAIISPLLGEKSAEDQV 658
           P    YN II  L   K+  D +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDAL 276


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 268/534 (50%), Gaps = 28/534 (5%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI----QKLKVKG-------H 177
           ++  E ++ S  +   TP  F+   R C+ +  T+  YD++    + +++ G        
Sbjct: 55  IDLFESMIQSRPL--PTPIDFN---RLCSAVARTK-QYDLVLGFCKGMELNGIEHDMYTM 108

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           ++ I+ +      L   + +GR WKL       GY  +  TF+ ++   C E ++ EA++
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVA 161

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L  RM++    P++V  + +IN  C  G +  AL L  +M V  G    P+ VT+  ++N
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM-VEYG--FQPDEVTYGPVLN 218

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             CK G    A ++   M +  I  +V  Y+ +ID   + GS ++AL L +EM  +G+  
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + V Y+S I  L  +G  +    +L +MI ++I PD  T+S L     + G + +A +L+
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           N+++   +  D  +YN LI+  CK N L  A Q+   M+ +G  PDI+TY  LI+ YCK 
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITY 536
             ++  ++++  +      PN + YN+++ G C+   L+AAK L Q     G+  + +TY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             L++G   NG++ +A  +F +M+   + +    YNI+I+ +C       A  L   +  
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            G+ PD VTY  ++    K  S  E   L   M   G +PD+ TYN +I   LG
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++ M+    +     FN +  A+ +  + +  L     M  +GI  ++    ++IN  C
Sbjct: 57  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L FA  +  +   +  +   P+++T + ++NGFC  GRV  A  +   M++     
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYE---PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ T +TLI+G    G   EAL L D MV+ G  P+ V Y   ++ L   G+   AL + 
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +++I      YSI+   LC++G    A  L N++  + +  D  +Y+ LI  LC  
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                  ++L  MI R +IPD++T+  LID + K G +  A ++Y  M      P+ + Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I+G CK+  L  A  +       G   D +TY+ LIN Y    ++ +   +F E+ +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N + YN L+   C+ G    A+EL + M+  G+ P  VTY  L+     N    +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E+ + M  S ++     YN II  +      +D
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 195/412 (47%), Gaps = 39/412 (9%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   MV  G+  +  T+  V+  LCK      AL L+ +M +  I  +VV ++++I+  C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  + AL LF +M  M G  +  + VT++ +I G C  G+ +   ++   MI   I  
Sbjct: 257 KDGSFDDALSLFNEME-MKG--IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V T++ LID + + G   EA  L +EM+ RG+ P+ + YNS I     E  +  A  + 
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ K   PD  TYSIL    C+   V    +L  ++  + ++ +  +YN L+   C+S
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK------- 495
             L AAK+L   M+ RG+ P ++TYG L+DG C  G +  A++++E M+K          
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493

Query: 496 ----------------------------KPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
                                       KP++V YN +I GLCK  SL  A  L +  + 
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            G   D  TYN LI  +     +  +  +  EM+  G + +     ++I+ L
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 200/391 (51%), Gaps = 5/391 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L R C   G +  A D+ +K++ +    S+  ++  +  L K         L+ EM   G
Sbjct: 217 LNRLCKS-GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +V T++ +I  LC + K ++   +   M+   I P+VV F+ +I+   + G L  A 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L+ +M +  G  + P+++T+N +I+GFCK   +  A ++   M+  G + ++ TY+ LI
Sbjct: 336 ELYNEM-ITRG--IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           + Y +    ++ +RL  E+  +GL+PN + YN+ +      G +  A  +  +M+ + + 
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P   TY IL  GLC NG + +A ++  ++ +  M      YNI+I+ +C ++ +  A  L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
             S+  +G+ PD++TY  +I G CK G++  A  ++  MK+    P+   YN +I     
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
            + L ++  L++  +  G   D+ T   +I+
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVID 603


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 255/535 (47%), Gaps = 28/535 (5%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C+     +  L+      G    A+D+I+++ + G   + H     +  L  +     
Sbjct: 449 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 508

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            W+L+ +M + G   NV T+  +I  LC    L+ A+ L++RM + G++PN V +N +IN
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              +   +++A   F  + +M  + +  N VT+N +I G+C LG  + A  +   M++ G
Sbjct: 569 ILVENRRIKYA---FVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 625

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              N+ TY T+I GY   G++  ALR+ D M   G  P+   Y   I        +E A 
Sbjct: 626 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 685

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + ++M+D  +CP+  TY+ L  G C++  +  A  L   +       +  +YN+LI+ L
Sbjct: 686 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 745

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K NN + A++L   MI  G+ P+++TY  +IDG CK G+   A++++  M +    PNL
Sbjct: 746 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 805

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y+S+I  L ++  ++ A++L    +R GL+ D ITY  +I  Y ++GK+  AF     
Sbjct: 806 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 865

Query: 559 MRNVGIAVNKVGYNILINFL--------------------CKFGCYQQARELMKVMI--L 596
           M   G       Y +LI  L                    C FG     ++ + VM   L
Sbjct: 866 MIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKL 925

Query: 597 HGIIP--DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             + P         LV+  S      E  EL   M+  G+ PD + YN+++  LL
Sbjct: 926 AELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 980



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 249/506 (49%), Gaps = 4/506 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+++C    A       +  L   G  + + A++  L HL +L         Y  M+S G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              N+  +N VI ALCK+  + +A ++  ++ +S + P+   +  +I   C+  DL+ AL
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++F +M   + +   PN+VT++ +ING C  GRV  A ++   MI  GI     T    I
Sbjct: 441 QVFNQM---AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 497

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A RL  +M  +G  PN   Y + I  L   G ++ A+ +   M    + 
Sbjct: 498 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 557

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ L   L  N  +K AF + N +    +  +  +YN +I   C   +   A  +
Sbjct: 558 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV 617

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +++M+ RG   +++TY T+I GYC  GN   A+++ + M+    KP+   Y  +I G CK
Sbjct: 618 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 677

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
            + +++A  L       GL  + +TY  LI+GY  + K+  A ++   M+  G   N   
Sbjct: 678 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN+LI+ L K   +  A EL KVMI  GI P+ VTYT ++    KN S    +E+ + M+
Sbjct: 738 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 797

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G  P+  TY+++I  L  E   E+
Sbjct: 798 EQGCLPNLLTYSSLIRALGQEGKVEE 823



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 237/499 (47%), Gaps = 4/499 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + AL+   +++G T    D   ++  +G   ++  +N  ++ L K   +     + K++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  +  T+  +I   C++  L+ AL ++ +M K G  PN V ++ +IN  C  G +
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L R+M ++ G  +LP + T    I   C +G  E A  +   M   G + NV TY
Sbjct: 472 NEAFDLIREM-ILHG--ILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 528

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G    G  + A+ L   M + G+ PN V YN+ I+ L     ++ A  VL+ M  
Sbjct: 529 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 588

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  +  TY+ + KG C  G  K+A  + N +L+     +  +YN +I   C S N  +
Sbjct: 589 NGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 648

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A ++L  M   G  PD  +Y  LI G+CK   +E A  ++  M      PN V Y ++I+
Sbjct: 649 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 708

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CKD  LD A SLL+  +R G    + TYN LI+G       + A  +   M   GI  
Sbjct: 709 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 768

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V Y  +I+ LCK G    A E+   MI  G +P+ +TY++L+    +    EE   L 
Sbjct: 769 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 828

Query: 627 DDMVLSGVSPDNQTYNAII 645
            ++   G+ PD  TY  +I
Sbjct: 829 AELERHGLIPDEITYVKMI 847



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 222/529 (41%), Gaps = 63/529 (11%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            C+     + AL+      G  + A  +  ++   G   +   +N  ++ LV+   I   +
Sbjct: 521  CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 580

Query: 202  KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             +   M   G   N+ T+N +I   C     ++A+ +   ML+ G   N+V +N II   
Sbjct: 581  VVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 640

Query: 262  CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            C  G+   AL++   + +M      P+  ++  +I GFCK+ ++E A  +   M+  G+ 
Sbjct: 641  CDSGNTTSALRI---LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLC 697

Query: 322  CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             N  TY  LIDGY +    + A  L + M + G  PN   YN  IH L  + +  GA  +
Sbjct: 698  PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 757

Query: 382  LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
               MI++ I P+  TY+ +  GLC+NG    A ++ N+++E+  + +  +Y+ LI  L +
Sbjct: 758  CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817

Query: 442  SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
               +  A+ L + +   GLIPD ITY  +I+ Y   G +E A      M K   +P L  
Sbjct: 818  EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 877

Query: 502  YNSIINGL-------------------------------------CKDASLDAAKSL--- 521
            Y  +I GL                                      K A LD   S+   
Sbjct: 878  YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937

Query: 522  -------------LQASQRIGLL-------DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
                          +A++ +G +       D   YN+L+        +  A  +F  M  
Sbjct: 938  NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997

Query: 562  VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             G  V+  GY  LI  LC+    ++AR   + M++    PD V    L+
Sbjct: 998  QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 1046



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 228/523 (43%), Gaps = 61/523 (11%)

Query: 75   KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANS-----VSPL 129
            K+A+  +  +  +  F +++  + A++++LV  RR   A +++ NLM  N      V+  
Sbjct: 542  KVAIGLFHRMSRDGVFPNTVTYN-ALINILVENRRIKYAFVVL-NLMGRNGLFTNIVTYN 599

Query: 130  EFLEG---LLDSYEIC-----------KATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
            E ++G   L D  +              A    ++ +++     G T  A  ++  ++  
Sbjct: 600  EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 659

Query: 176  GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
            G      ++   +    K++++   + L+ EMV  G   N  T+  +I   CK+ KL+ A
Sbjct: 660  GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 719

Query: 236  LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             SL   M +SG  PNV  +N++I+   +  +   A +L +   VM  + + PN VT+  +
Sbjct: 720  TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK---VMIEEGIFPNVVTYTAM 776

Query: 296  INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
            I+G CK G    A E+   MI+ G   N+ TY++LI    + G  EEA  L  E+ + GL
Sbjct: 777  IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 836

Query: 356  MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            +P+ + Y   I      G VE A   L  MI     P  +TY +L KGL      K  + 
Sbjct: 837  IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL------KNEYL 890

Query: 416  LHNQVLE-------------EHMVGDAYS-----------------YNILINYLCKSNNL 445
            L +Q L              +    DA S                  N L++ L  +   
Sbjct: 891  LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 950

Query: 446  AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
              A +LL SMI +GL PD   Y +L+    +  N++ A+ V+++M     + +L  Y  +
Sbjct: 951  FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 1010

Query: 506  INGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFING 547
            I  LC+      A+   +    R    D +    LI+G   +G
Sbjct: 1011 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 180/452 (39%), Gaps = 72/452 (15%)

Query: 115  LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
            ++ G   S N+ S L  L+ + D    CK     +  L+    +I   E A+ +  ++  
Sbjct: 636  IIKGYCDSGNTTSALRILDLMRDGG--CKPDEWSYTELICGFCKISKMESAFGLFNEMVD 693

Query: 175  KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
             G   +   +   +    K  ++     L + M   G   NV T+N++I+ L K+     
Sbjct: 694  DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 753

Query: 235  ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            A  L   M++ GI+PNVV +  +I+  C+ G    AL++F KM +  G   LPN +T++ 
Sbjct: 754  AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM-IEQG--CLPNLLTYSS 810

Query: 295  IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            +I    + G+VE AE +   + + G+  +  TY  +I+ Y   G  E A      M+K G
Sbjct: 811  LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 870

Query: 355  LMPN--------------------------NVVYNSTIHWLFAEGD-------------- 374
              P                           +VV N +  +   + D              
Sbjct: 871  CQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDP 930

Query: 375  -----VEGALF--------------VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA-- 413
                 V+ AL               +L  MI + +CPD   Y+ L   L R   V  A  
Sbjct: 931  GLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMG 990

Query: 414  -FK-LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
             FK +  Q  E H+ G    Y  LI  LC+ +    A+    +M++R   PD +    LI
Sbjct: 991  VFKHMSTQGCEVHLNG----YKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 1046

Query: 472  DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            DG  + G  +  ++    M+     P+  IY 
Sbjct: 1047 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYT 1078


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 175/650 (26%), Positives = 309/650 (47%), Gaps = 53/650 (8%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTW--VGENNRFSHSLESSCAIVHLLVNWRRFDD 112
            P+L  +L NR  S  +    L+   YT+  + +    +H  E + A    L+      D
Sbjct: 88  GPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVD 147

Query: 113 ALL---LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYD 167
           A++   L+     A      E L+ LL         P VF  + L+++    G +  A D
Sbjct: 148 AIIASHLLKGFCEAKRTD--EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 168 VIQKLKVKGH--SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
           +++ +   G   S  + A+N  +    K  ++ +   L+KEMV  G   ++ T++ V++A
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LCK   +++A +   +M+  G+ P+   +N +I      G  + A+++F++M      S+
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM---RRQSI 322

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           LP+ V  N ++   CK G+++ A ++   M   G + +V +Y  +++GYA  G   +   
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L D M+  G+ P+   +N  I      G ++ A+ + ++M D  + P   TY  +   LC
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI---VR---- 458
           R G +  A +  NQ++++ +V D Y+Y+ LI   C   +L  AK+L+S ++   +R    
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502

Query: 459 ----------------------------GLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
                                       GL PD + Y  L+DGYC  G +E A++V++ M
Sbjct: 503 FFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 562

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKI 549
                +PN+V Y +++NG CK   +D   SL +   + G+  + I YN +I+G F  G+ 
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             A   F EM   GIA+NK  Y+I++  L K  C+ +A  L K +    +  D +T  T+
Sbjct: 623 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAED 656
           +    +    EE  +L   +  SG+ P   TY+ +I+ LL E   + AED
Sbjct: 683 IAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAED 732



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 244/534 (45%), Gaps = 52/534 (9%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-------LYKEMVSCGYVEN 215
           E A+D++ +L+ +G  V     N FL+ L +                L+    S      
Sbjct: 48  EEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPR 107

Query: 216 VNTFNLVIYALCKEC-----KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           V +     YA+  +C     + E AL+ + ++L++G+  + +  + ++   C+    + A
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYA 328
           L +        G   +P+  ++N ++   C  G+   A+++   M + G  C  +V  Y 
Sbjct: 168 LDILLHRTPELG--CVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDG+ + G   +A  L  EMV+RG+ P+ V Y+S +H L     ++ A   L  M++K
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD++TY+ L  G    G  K+A ++  ++  + ++ D  + N L+  LCK   +  A
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 449 KQLLSSMIVR-----------------------------------GLIPDIITYGTLIDG 473
           + +  +M ++                                   G+ PDI T+  LI  
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 405

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y   G ++ A+ ++  M+    KP++V Y ++I  LC+   +D A          G++ D
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              Y+ LI G+  +G + +A  + SE+ N G+ ++ V +  +IN LCK G    A+ +  
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +  G+ PD V Y  L+  +      E+ + + D MV +G+ P+   Y  +++
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 204/416 (49%), Gaps = 4/416 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            + L+ +  + G  + A DV   + +KG +  + ++   L+       +     L+  M+
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   ++ TFN++I A      L++A+ ++  M   G+ P+VV +  +I   C++G ++
Sbjct: 389 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A++ F +M       V+P+   ++C+I GFC  G +  A+E+   ++  G+  ++  + 
Sbjct: 449 DAMEKFNQM---IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           ++I+   + G   +A  + D  V  GL P+ VVYN  +      G +E AL V   M+  
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I P+   Y  L  G C+ G + +   L  ++L++ +      YNI+I+ L ++     A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K     M   G+  +  TY  ++ G  K    + A+ +++ ++ +  K +++  N++I G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 509 LCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           + +   ++ AK L  +  R GL+  A+TY+ +I      G + EA  MFS M+N G
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 206/405 (50%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++A    G  + A  +  +++  G    +  +   ++ L ++ ++    + + +M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G V +   ++ +I   C    L +A  L   ++ +G+  ++V F  IIN  C++G +
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G  + P++V +N +++G+C +G++E A  +  AM+ AGI+ NV  Y
Sbjct: 518 MDAQNIF-DLTVNVG--LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM+++G+ P+ ++YN  I  LF  G    A     +M +
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  +  TYSI+ +GL +N C  +A  L  ++   ++  D  + N +I  + ++  +  
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +S+   GL+P  +TY  +I    K G +E A  ++ +M+    +P+  + N ++ 
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            L K   +  A + L +  +R   L+ +T   L++ +   G   E
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 268/534 (50%), Gaps = 28/534 (5%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI----QKLKVKG-------H 177
           ++  E ++ S  +   TP  F+   R C+ +  T+  YD++    + +++ G        
Sbjct: 84  IDLFESMIQSRPL--PTPIDFN---RLCSAVARTK-QYDLVLGFCKGMELNGIEHDMYTM 137

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           ++ I+ +      L   + +GR WKL       GY  +  TF+ ++   C E ++ EA++
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVA 190

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L  RM++    P++V  + +IN  C  G +  AL L  +M V  G    P+ VT+  ++N
Sbjct: 191 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM-VEYG--FQPDEVTYGPVLN 247

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             CK G    A ++   M +  I  +V  Y+ +ID   + GS ++AL L +EM  +G+  
Sbjct: 248 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 307

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + V Y+S I  L  +G  +    +L +MI ++I PD  T+S L     + G + +A +L+
Sbjct: 308 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 367

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           N+++   +  D  +YN LI+  CK N L  A Q+   M+ +G  PDI+TY  LI+ YCK 
Sbjct: 368 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 427

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITY 536
             ++  ++++  +      PN + YN+++ G C+   L+AAK L Q     G+  + +TY
Sbjct: 428 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             L++G   NG++ +A  +F +M+   + +    YNI+I+ +C       A  L   +  
Sbjct: 488 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 547

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            G+ PD VTY  ++    K  S  E   L   M   G +PD+ TYN +I   LG
Sbjct: 548 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 601



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++ M+    +     FN +  A+ +  + +  L     M  +GI  ++    ++IN  C
Sbjct: 86  LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 145

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L FA  +  +   +  +   P+++T + ++NGFC  GRV  A  +   M++     
Sbjct: 146 RKKKLLFAFSVLGRAWKLGYE---PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 202

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ T +TLI+G    G   EAL L D MV+ G  P+ V Y   ++ L   G+   AL + 
Sbjct: 203 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 262

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +++I      YSI+   LC++G    A  L N++  + +  D  +Y+ LI  LC  
Sbjct: 263 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 322

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                  ++L  MI R +IPD++T+  LID + K G +  A ++Y  M      P+ + Y
Sbjct: 323 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 382

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I+G CK+  L  A  +       G   D +TY+ LIN Y    ++ +   +F E+ +
Sbjct: 383 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 442

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N + YN L+   C+ G    A+EL + M+  G+ P  VTY  L+     N    +
Sbjct: 443 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 502

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E+ + M  S ++     YN II  +      +D
Sbjct: 503 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 537



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 195/412 (47%), Gaps = 39/412 (9%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   MV  G+  +  T+  V+  LCK      AL L+ +M +  I  +VV ++++I+  C
Sbjct: 226 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  + AL LF +M  M G  +  + VT++ +I G C  G+ +   ++   MI   I  
Sbjct: 286 KDGSFDDALSLFNEME-MKG--IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V T++ LID + + G   EA  L +EM+ RG+ P+ + YNS I     E  +  A  + 
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ K   PD  TYSIL    C+   V    +L  ++  + ++ +  +YN L+   C+S
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK------- 495
             L AAK+L   M+ RG+ P ++TYG L+DG C  G +  A++++E M+K          
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522

Query: 496 ----------------------------KPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
                                       KP++V YN +I GLCK  SL  A  L +  + 
Sbjct: 523 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            G   D  TYN LI  +     +  +  +  EM+  G + +     ++I+ L
Sbjct: 583 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 200/391 (51%), Gaps = 5/391 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L R C   G +  A D+ +K++ +    S+  ++  +  L K         L+ EM   G
Sbjct: 246 LNRLCKS-GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +V T++ +I  LC + K ++   +   M+   I P+VV F+ +I+   + G L  A 
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L+ +M +  G  + P+++T+N +I+GFCK   +  A ++   M+  G + ++ TY+ LI
Sbjct: 365 ELYNEM-ITRG--IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 421

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           + Y +    ++ +RL  E+  +GL+PN + YN+ +      G +  A  +  +M+ + + 
Sbjct: 422 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 481

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P   TY IL  GLC NG + +A ++  ++ +  M      YNI+I+ +C ++ +  A  L
Sbjct: 482 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 541

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
             S+  +G+ PD++TY  +I G CK G++  A  ++  MK+    P+   YN +I     
Sbjct: 542 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 601

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
            + L ++  L++  +  G   D+ T   +I+
Sbjct: 602 GSGLISSVELIEEMKVCGFSADSSTIKMVID 632


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 159/610 (26%), Positives = 280/610 (45%), Gaps = 33/610 (5%)

Query: 67  VSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV 126
           V + +  P  ALE +      + F H+  +   IV  L +   F++   L+  +    + 
Sbjct: 13  VVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNN 72

Query: 127 SPLE--FLEGL------------LDSYEI-----CKATPAVFDALVRACTQIGATEGAYD 167
           + LE  ++E +            +D++E      C  +    +A++    + G    A+ 
Sbjct: 73  ALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHK 132

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           V  +++ +G    ++ +   +    K        +L + M   G   N   +  V+  L 
Sbjct: 133 VYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLY 192

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
              + + A  L+  ML   + P+VV FN +++  C+ G      +  R +G +    V P
Sbjct: 193 DSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKG---LVFESERLLGKVLKRGVCP 249

Query: 288 NSVTHNCIINGFCKLG---------RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           N  T N  + G C+ G         RV  AEE    M+  G + +  TY ++IDGY + G
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKG 309

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             ++A R+  + V +G  P+   Y S I+    +GD + A+ V  D + K + P    Y+
Sbjct: 310 MVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYN 369

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L KGL + G +  A +L N++ E   + + ++YN++IN LCK   ++ A  L+   I +
Sbjct: 370 TLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK 429

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  PDI TY TLIDGYCK   ++ A ++   M      P+++ YN+++NGLCK    +  
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             + +A +  G   + ITYN +++      K+ EA  +  EM++ G+  + V +  L   
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549

Query: 578 LCKFGCYQQARELMKVM-ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            CK G    A +L + M   + +     TY  +V+ FS+  +    ++L   M  SG  P
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609

Query: 637 DNQTYNAIIS 646
           DN TY  +I 
Sbjct: 610 DNYTYRVVID 619



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 234/441 (53%), Gaps = 8/441 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A+   ++ L    E     +L+ EM++     +V  FN +++ LCK+  + E+  L  ++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV------MSGDSVLPNSVTHNCII 296
           LK G+ PN+  FN+ +   C+ G L+ A++  R +        M      P+ +T+N II
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +G+CK G V+ A  +    +  G   +  TY +LI+G+ + G  + A+ +  + + +GL 
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ V+YN+ I  L  +G +  AL ++++M +    P+ +TY+++  GLC+ GCV  A  L
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +  + +    D ++YN LI+  CK   L +A ++++ M  +G+ PD+ITY TL++G CK
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
            G  E  +++++ M++    PN++ YN I++ LCK   ++ A  LL   +  GL  D ++
Sbjct: 483 AGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVS 542

Query: 536 YNTLINGYFINGKIAEAFAMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           + TL  G+   G I  A+ +F  M +   +      YNI+++   +      A +L  VM
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVM 602

Query: 595 ILHGIIPDYVTYTTLVTRFSK 615
              G  PD  TY  ++  F K
Sbjct: 603 KNSGCDPDNYTYRVVIDGFCK 623



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 222/470 (47%), Gaps = 32/470 (6%)

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L H  +  E+ +     +E V+   +E      +  Y   ++ K++EA+  + RM     
Sbjct: 50  LGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYG--RKGKVQEAVDTFERMDFYNC 107

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+V   N I+N   + G    A K++ +M       V  +  T+   I  FCK  R   
Sbjct: 108 DPSVHSHNAIMNILVEFGYHNQAHKVYMRM---RDRGVQSDVYTYTIRIKSFCKTARPYA 164

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M + G D N   Y T++ G    G  + A  L DEM+ R L P+ V +N  +H
Sbjct: 165 ALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVH 224

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L  +G V  +  +L  ++ + +CP+ FT++I  +GLCR G + +A + +++V+E     
Sbjct: 225 VLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVR-NSRVVE----- 278

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
                               A++ L  M+  G  PD +TY ++IDGYCK G ++ A +V 
Sbjct: 279 --------------------AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVL 318

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFIN 546
           ++      KP+   Y S+ING CKD   D A ++ +     GL  +I  YNTLI G    
Sbjct: 319 KDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQ 378

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G I  A  + +EM   G   N   YN++IN LCK GC   A  L+   I  G  PD  TY
Sbjct: 379 GLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTY 438

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            TL+  + K    +   E+ + M   G++PD  TYN +++ L     +E+
Sbjct: 439 NTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 178/393 (45%), Gaps = 8/393 (2%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           +L+    + G  + A  V +    KG   SI  +N  +  L +   I    +L  EM   
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN 394

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G + N+ T+NLVI  LCK   + +A  L    +  G  P++  +N +I+  C+   L+ A
Sbjct: 395 GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSA 454

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            ++  +M       + P+ +T+N ++NG CK G+ E   EI  AM + G   N+ TY  +
Sbjct: 455 TEMVNRMW---SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNII 511

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH- 389
           +D   +     EA+ L  EM  +GL P+ V + +        GD++GA  +   M  ++ 
Sbjct: 512 VDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYD 571

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +C    TY+I+         +  A KL + +       D Y+Y ++I+  CK  N+    
Sbjct: 572 VCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGY 631

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           + L   + +  IP + T+G +++  C    +  AV +   M +    P  V  N+I    
Sbjct: 632 KFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEAD 689

Query: 510 CKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
            K  +  A K L++   + G +   TY  L +G
Sbjct: 690 KKVVA--APKILVEDLLKKGHIAYYTYELLYDG 720



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 161/324 (49%), Gaps = 4/324 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + +  +++ L++  +Q G    A  ++ ++   G   +I  +N  ++ L K+  +     
Sbjct: 362 RPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASH 421

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  + ++ G   ++ T+N +I   CK+ KL+ A  +  RM   G+ P+V+ +N ++N  C
Sbjct: 422 LVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLC 481

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  E  +++F+    M      PN +T+N I++  CK  +V  A ++   M   G+  
Sbjct: 482 KAGKSEEVMEIFK---AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKP 538

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFV 381
           +V ++ TL  G+ + G  + A +L   M K+  +      YN  +     + ++  A+ +
Sbjct: 539 DVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKL 598

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            S M +    PD++TY ++  G C+ G + Q +K   + +E+  +    ++  ++N LC 
Sbjct: 599 FSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCV 658

Query: 442 SNNLAAAKQLLSSMIVRGLIPDII 465
            + +  A  ++  M+ +G++P+ +
Sbjct: 659 KDKVHEAVGIIHLMLQKGIVPETV 682



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 175/390 (44%), Gaps = 13/390 (3%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR-TYA 328
           AL++F      S D     + T+ CI+      G  E  E++   M +   +  +   Y 
Sbjct: 23  ALEMFN--SAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYI 80

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
             +  Y R G  +EA+   + M      P+   +N+ ++ L   G    A  V   M D+
Sbjct: 81  EAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDR 140

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            +  D +TY+I  K  C+      A +L   + E     +A +Y  ++  L  S     A
Sbjct: 141 GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHA 200

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++L   M+ R L PD++ +  L+   CK G +  + ++   + K    PNL  +N  + G
Sbjct: 201 RELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQG 260

Query: 509 LCKDASLDAA---KSLLQASQRIGLL-------DAITYNTLINGYFINGKIAEAFAMFSE 558
           LC++ +LD A     +++A + +  +       D +TYN++I+GY   G + +A  +  +
Sbjct: 261 LCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKD 320

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
               G   ++  Y  LIN  CK G   +A  + K  +  G+ P  V Y TL+   S+   
Sbjct: 321 AVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGL 380

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               ++L ++M  +G  P+  TYN +I+ L
Sbjct: 381 ILPALQLMNEMAENGCLPNIWTYNLVINGL 410



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 1/115 (0%)

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
            Y++C  T A ++ +V A ++      A  +   +K  G     + +   +    K+  I
Sbjct: 569 QYDVCHTT-ATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNI 627

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
            + +K   E +   ++ ++ TF  V+  LC + K+ EA+ + + ML+ GI P  V
Sbjct: 628 TQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 264/521 (50%), Gaps = 12/521 (2%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRA---CT-QIGA----TEGAYDVIQKLKVKGHSVSI 181
           EFL  L +  +     P VF   +     C    G     T  A +++++++  G S ++
Sbjct: 231 EFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTV 290

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             ++ ++  L ++  +       + ++S   + NV  +N +I+ LCK+ +L+EAL +   
Sbjct: 291 VTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEE 350

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M   GI P+V  ++++I+  C+ GD+E  L L  +M   + +   P+ V+++ + +G CK
Sbjct: 351 MKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME---PSLVSYSSLFHGLCK 407

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
               + + +I   +  AG   +   Y+ LI G+   G  + A +L +EMV+  L P+   
Sbjct: 408 KRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSN 467

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           + S +H     G    AL   + M++  I P   T +++    CR G V++A  L N++ 
Sbjct: 468 FESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
            + +  + ++YN +IN LCK      A +L   M+ R ++P ++ Y TLIDG+ K  N +
Sbjct: 528 TQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQ 587

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+ +Y  M K+   P++V Y  +IN LC  + +  A +L +     G+  D I+Y ++I
Sbjct: 588 KALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVI 647

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            G+   G + +A+A+F+EM   G     V Y  L++  CK      A  L+  M   GI 
Sbjct: 648 AGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGIT 707

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           PD VTY  L+    +  + ++ +E+ ++M  +GV PD+ TY
Sbjct: 708 PDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 254/528 (48%), Gaps = 10/528 (1%)

Query: 125 SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           ++   E    LL+S +    +  VFD L++        E A DV  + K  G  +S  + 
Sbjct: 158 NLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSC 217

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK------ECKLEEALSL 238
           N  L  L + N       L++EM S G   NV T+ +++   CK      +    +A  +
Sbjct: 218 NFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEI 277

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
              M ++G  P VV ++  I   C+VG +E AL   R +   +G   L N   +N II+G
Sbjct: 278 LEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANG---LVNVYCYNAIIHG 334

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK G ++ A ++   M   GI  +V TY+ LI G+ + G  E+ L L +EM    + P+
Sbjct: 335 LCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPS 394

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V Y+S  H L  +   + +L +  D+       D   YSIL KG C  G +  A KL  
Sbjct: 395 LVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLME 454

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           +++  ++  D  ++  L++  CK      A +  + M+  G++P I T   +ID +C+ G
Sbjct: 455 EMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREG 514

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYN 537
            +E A+ +   M+     PNL  YN++IN LCK+   + A  L     +R  L   + Y+
Sbjct: 515 RVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYS 574

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLI+G+       +A  +++ M  +G+  + V Y ILIN LC      +A  L K M  +
Sbjct: 575 TLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTEN 634

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           G+ PD ++YT+++  F +     +   L ++M+  G  P   TY +++
Sbjct: 635 GMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLV 682



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 232/475 (48%), Gaps = 35/475 (7%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +L+  E    +P V  +   +    ++G  E A D ++ L      V+++ +N  +  L 
Sbjct: 277 ILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLC 336

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  E+    K+ +EM SCG   +V T++++I+  CK+  +E+ L L   M  S + P++V
Sbjct: 337 KKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLV 396

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGV------------------MSGD----------- 283
            ++ + +  C+    + +L +FR +G                   M GD           
Sbjct: 397 SYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456

Query: 284 ---SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
              ++ P+      +++GFCK+G    A E    M++ GI  ++ T   +ID + R G  
Sbjct: 457 VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           EEAL L +EM  +G+ PN   YN+ I+ L  E   E AL +   M+ +++ P    YS L
Sbjct: 517 EEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTL 576

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G  +    ++A  L+ ++L+  +  D  +Y ILIN LC  + +  A  L   M   G+
Sbjct: 577 IDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGM 636

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD I+Y ++I G+C+ G++  A  ++  M +    P +V Y S+++G CK   +D A  
Sbjct: 637 TPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADM 696

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           L+   +R G+  D +TYN LI  +   G + +A  M +EM+  G+  + + Y +L
Sbjct: 697 LIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 211/442 (47%), Gaps = 10/442 (2%)

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V  F+L+I        LE A+ ++ +  K+G+  +    N ++    +    EF   L
Sbjct: 177 RSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSL 236

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCK--LGRVEF----AEEIRYAMIKAGIDCNVRTY 327
           F +M         PN  T+  ++N +CK   G  +     A EI   M + G    V TY
Sbjct: 237 FEEM---KSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +T I G  R G  E AL     ++    + N   YN+ IH L  +G+++ AL VL +M  
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I PD +TYSIL  G C+ G V++   L  ++   +M     SY+ L + LCK      
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           +  +   +   G   D   Y  LI G+C  G+++ A ++ E M +    P+   + S+++
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CK      A          G+L +I T N +I+ +   G++ EA  + +EM+  GI  
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFP 533

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YN +IN LCK    ++A EL  +M+   ++P  V Y+TL+  F+K  + ++ + L+
Sbjct: 534 NLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLY 593

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
             M+  GV+PD   Y  +I+ L
Sbjct: 594 ARMLKIGVTPDMVAYTILINIL 615



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 213/470 (45%), Gaps = 31/470 (6%)

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           E+ R  K    M   G+  +++ F  V+  L       E     Y +L+     ++VC+ 
Sbjct: 104 EVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEV----YALLR-----DIVCYY 154

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
             +N          A +LF  + + S      + +  + +I  F     +E A ++    
Sbjct: 155 NKVNLD--------AFELF-PILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQA 205

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL----FA 371
            K G++ + R+   L+   A     E    L +EM   G  PN   Y   +++     F 
Sbjct: 206 KKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFG 265

Query: 372 EGDVEG--ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
           E D++   A  +L +M      P   TYS    GLCR G V+ A      ++  + + + 
Sbjct: 266 EADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNV 325

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y YN +I+ LCK   L  A ++L  M   G+ PD+ TY  LI G+CK G++E  + + E 
Sbjct: 326 YCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEE 385

Query: 490 MKKVEKKPNLVIYNSIINGLCK----DASLDAAKSLLQASQRIGLLDAITYNTLINGYFI 545
           MK    +P+LV Y+S+ +GLCK    D SLD  + L  A  +    D   Y+ LI G+ +
Sbjct: 386 MKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYK---YDQTAYSILIKGFCM 442

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G +  A  +  EM    +A +   +  L++  CK G +  A E   +M+  GI+P   T
Sbjct: 443 QGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIAT 502

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
              ++    +    EE + L ++M   G+ P+  TYNA+I+ L  E+ +E
Sbjct: 503 CNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSE 552


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 244/474 (51%), Gaps = 10/474 (2%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A ++++++K  G +         ++ +    ++       + M   G   NV T+
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 60

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I A  +  KLEEA+ L   M + G  PN+V +N++++  C++  +  A  + +KM  
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM-- 118

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           + G    PN +T N +++GFCK G V+ A ++   M+  G+  NV TY+ LIDG  +   
Sbjct: 119 IEG-GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  + +EM   G+ P+   Y++ IH L     +E A  +L  M      PD   YS 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +    C++G + +A K   ++ ++    D  +YN +I+ LCK   +A A+ +L  M   G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 460 -LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            ++PD++TY T+I+G CK   +  A ++ + M K    P++V Y +II+GLCK   L+ A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + LLQ  +R G   + +TY TLI+G     K+ EA  +  EMRN G   N V YN ++N 
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 578 LCKFGCYQQARELMKVMI--LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           LC  G  ++A++L++ M        PD  TY T+V     +   +E  +L + M
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 218/428 (50%), Gaps = 16/428 (3%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C    L  AL L   M  +G  P+      II      GDL+ A+   R MG        
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD------ 54

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN VT+  +I  F +  ++E A ++   M + G   N+ TY  L+D   +      A  +
Sbjct: 55  PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +M++ G  PN + +NS +      G+V+ A  +L  M+ K + P+  TYS L  GLC+
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174

Query: 407 NGCVKQAFKLHNQVLEEH----MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           +    Q F    +VLEE     +  DA++Y+ LI+ LCK++ +  A+Q+L  M   G  P
Sbjct: 175 S----QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 230

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D++ Y ++I  +CK G +  A +  + M+K  K P++V YN++I+GLCK   +  A+ +L
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290

Query: 523 QASQRIG--LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
              Q  G  L D +TY+T+ING   +  + EA  +   M   G   + V Y  +I+ LCK
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 350

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G  ++A  L++ M   G  P+ VTYTTL++   K    +E   + ++M  +G  P+  T
Sbjct: 351 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 410

Query: 641 YNAIISPL 648
           YN +++ L
Sbjct: 411 YNTMVNGL 418



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/397 (35%), Positives = 203/397 (51%), Gaps = 8/397 (2%)

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  GDL  AL+L  +M         P++ TH  II      G ++ A +   +M   G D
Sbjct: 1   CNAGDLHAALELLEEM---KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCD 54

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY  LI  +AR    EEA++L +EM +RG  PN V YN  +  L     V  A  V
Sbjct: 55  PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  MI+    P+  T++ L  G C+ G V  A KL   ++ + M  +  +Y+ LI+ LCK
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S     AK++L  M   G+ PD  TY  LI G CK   IE A Q+   M      P++V+
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234

Query: 502 YNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+SII+  CK   L +A K+L +  ++    D +TYNT+I+G    GKIAEA  +  +M+
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294

Query: 561 NVG-IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
             G +  + V Y+ +IN LCK     +A++L+  M   G  PD VTYTT++    K    
Sbjct: 295 ESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 354

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           EE   L   M  +G +P+  TY  +IS L   +  ++
Sbjct: 355 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 391



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 223/435 (51%), Gaps = 11/435 (2%)

Query: 132 LEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           L+G +D        P V  + AL+ A  +    E A  ++++++ +G   ++  +N  + 
Sbjct: 41  LDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 100

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L KL+ +G    + K+M+  G+  NV TFN ++   CK   +++A  L   M+  G+ P
Sbjct: 101 ALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 160

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           NVV ++ +I+  C+      A ++  +M       V P++ T++ +I+G CK  ++E AE
Sbjct: 161 NVVTYSALIDGLCKSQKFLEAKEVLEEM---KASGVTPDAFTYSALIHGLCKADKIEEAE 217

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           ++   M  +G   +V  Y+++I  + + G   EA +   EM K+   P+ V YN+ I  L
Sbjct: 218 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 277

Query: 370 FAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
              G +  A  +L  M +   + PD  TYS +  GLC++  + +A KL +++ +     D
Sbjct: 278 CKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 337

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +Y  +I+ LCK   L  A+ LL  M   G  P+++TY TLI G CK   ++ A +V E
Sbjct: 338 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 397

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL----DAITYNTLINGYF 544
            M+     PNLV YN+++NGLC    +  A+ L+Q   + G      DA TY T++N   
Sbjct: 398 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ-RMKDGRAECSPDAATYRTIVNALM 456

Query: 545 INGKIAEAFAMFSEM 559
            +  + EA  +  +M
Sbjct: 457 SSDLVQEAEQLLEQM 471


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 253/475 (53%), Gaps = 4/475 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +  + ++   ++   K  +  + +  Y EM+      +V T++ +I ALCK   +++A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           + +   M+K+G+ PN + +N I++  C     + A+   +KM     D V P+ VT+N +
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM---RSDGVEPDVVTYNSL 307

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++  CK GR   A +I  +M K G++ ++ TY TL+ GYA  G+  E   L D MV+ G+
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P++ V+N  I     +  V+ A+ V S M    + P+  TY  +   LC++G V  A  
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
              Q+++E +  +   Y  LI+ LC  +    A++L+  M+ RG+  + I + ++I  +C
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHC 487

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           K G +  + ++++ M ++  KPN++ Y+++I+G C    +D A  LL +   +G+  D +
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYNTLINGY    ++ +A A+F EM + G++ N + YNI++  L        A+EL   +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              G   +  TY  ++    KN   +E + +  ++ L+ +  + +T+N +I  LL
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 236/507 (46%), Gaps = 37/507 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++H +   +    +   +   +     +V  G+     TF  ++  LC + +  +A+ + 
Sbjct: 86  TVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145

Query: 240 YR-MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
            R M +    P+V    +++   C     + AL+L   M    G    P+ V++  +ING
Sbjct: 146 LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVING 205

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           F K G  + A    + M+   I  +V TY+++I    +G + ++A+ +   MVK G+MPN
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            + YNS +H   +    + A+  L  M    + PD  TY+ L   LC+NG   +A K+ +
Sbjct: 266 CMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFD 325

Query: 419 QVLEEHMVGDAYSY-----------------------------------NILINYLCKSN 443
            + +  +  D  +Y                                   NILI    K  
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  + S M   GL P+++TYG +I   CK G+++ A+  +E M      PN+++Y 
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445

Query: 504 SIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           S+I+ LC     D A+ L L+   R   L+ I +N++I+ +   G++ E+  +F  M  +
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N + Y+ LI+  C  G   +A +L+  M   G+ PD VTY TL+  + +    ++ 
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + L  +MV SGVSP+  TYN I+  L 
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLF 592



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 262/549 (47%), Gaps = 5/549 (0%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALVRACTQIGATEGAYDV 168
           F   +LL G      S   LE L  + D      A   V +  ++    + G ++ AY  
Sbjct: 159 FSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
             ++  +  S  +  +++ ++ L K   + +  ++   MV  G + N  T+N +++  C 
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCS 278

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             + +EA+    +M   G+ P+VV +N +++  C+ G    A K+F     M+   + P+
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDS---MTKRGLEPD 335

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T+  ++ G+   G +     +   M++ GI  +   +  LI  YA+    +EA+ +  
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +M + GL PN V Y + I  L   G V+ A+     MID+ + P+   Y+ L   LC   
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
              +A +L  ++L+  +  +   +N +I+  CK   +  +++L   M+  G+ P++ITY 
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDGYC  G ++ A ++  +M  V  KP+ V YN++ING C+ + +D A +L +     
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  + ITYN ++ G F   + A A  ++  +   G  +    YNI+++ LCK     +A
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             + + + L  +  +  T+  ++    K    +E  +L      +G+ P+  TY  +   
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695

Query: 648 LLGEKSAED 656
           ++G+   E+
Sbjct: 696 IIGQGLLEE 704



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/516 (24%), Positives = 230/516 (44%), Gaps = 24/516 (4%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLL---------MGNLMSANSV--------SPL 129
           + R S  + +  +I+  L   +  D A+ +         M N M+ NS+         P 
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 130 EFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           E + G L         P V  +++L+    + G +  A  +   +  +G    I  +   
Sbjct: 284 EAI-GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L        +     L   MV  G   + + FN++I A  K+ K++EA+ ++ +M + G+
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            PNVV +  +I   C+ G ++ A+  F +M     + + PN + +  +I+  C   + + 
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQM---IDEGLTPNIIVYTSLIHSLCIFDKWDK 459

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           AEE+   M+  GI  N   + ++I  + + G   E+ +L D MV+ G+ PN + Y++ I 
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLID 519

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G ++ A  +LS M    + PD  TY+ L  G CR   +  A  L  +++   +  
Sbjct: 520 GYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +YNI++  L  +   AAAK+L   +   G   ++ TY  ++ G CK    + A++++
Sbjct: 580 NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           +N+   + +     +N +I  L K    D AK L  A    GL+ +  TY  +       
Sbjct: 640 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 699

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           G + E   +F  M + G  V+    N ++  L + G
Sbjct: 700 GLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRG 735



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 163/353 (46%), Gaps = 6/353 (1%)

Query: 312 RYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           R A   AG +   V TY  LI    R G  +        +VK+G     + +   +  L 
Sbjct: 74  RMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLC 133

Query: 371 AEGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-- 427
           A+     A+  VL  M +    PD F+ +IL KGLC     ++A +L + + ++   G  
Sbjct: 134 ADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA 193

Query: 428 -DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  SY  +IN   K  +   A      M+ R + PD++TY ++I   CKG  ++ A++V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
              M K    PN + YNSI++G C       A   L+  +  G+  D +TYN+L++    
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           NG+  EA  +F  M   G+  +   Y  L+      G   +   L+ +M+ +GI PD+  
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +  L+  ++K    +E + +   M   G++P+  TY A+I  L    S +D +
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 159/357 (44%), Gaps = 24/357 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP--AVFDALVRAC 156
           A++ +L      DDA+L    ++           EGL         TP   V+ +L+ + 
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMID----------EGL---------TPNIIVYTSLIHSL 451

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
                 + A ++I ++  +G  ++   +N+ +    K   +    KL+  MV  G   NV
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T++ +I   C   K++EA  L   M   G+ P+ V +N +IN  C+V  ++ AL LF++
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M V SG  V PN +T+N I+ G     R   A+E+   + K+G    + TY  ++ G  +
Sbjct: 572 M-VSSG--VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
              ++EALR+   +    L      +N  I  L   G  + A  +        + P+++T
Sbjct: 629 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           Y ++ + +   G +++  +L   + +     D+   N ++  L +   +  A   LS
Sbjct: 689 YRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 127/278 (45%), Gaps = 6/278 (2%)

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
           +E  +D++ ++ VK + ++   ++  +       ++    KL   M S G   +  T+N 
Sbjct: 495 SEKLFDLMVRIGVKPNVIT---YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I   C+  ++++AL+L+  M+ SG+ PN++ +N+I+           A +L+  +G+  
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY--VGITK 609

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
             + L  S T+N I++G CK    + A  +   +    +    RT+  +I    + G ++
Sbjct: 610 SGTQLELS-TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRND 668

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA  L       GL+PN   Y      +  +G +E    +   M D     D    + + 
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIV 728

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
           + L + G + +A    + + E+H   +A + ++ I+ L
Sbjct: 729 RELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 263/554 (47%), Gaps = 42/554 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS--IHAWNNFLSHLVKLNEIGR 199
           C      +  +++A      ++ A D++Q +  +G + S  + A++  +       E G+
Sbjct: 224 CVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGK 283

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L+ EM   G   +V T+NL+I ALCK   +++A  +  +M   G  P+ V ++ +I+
Sbjct: 284 ACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIH 343

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
               +G L+ A K+FR+M       ++PN VT N  +   CK GR + A E   +M   G
Sbjct: 344 GYATLGRLKEAAKMFREM---KKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKG 400

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              ++ +Y TL+ GYA  G   + + L + M   G+  N  V+   IH     G V+ A+
Sbjct: 401 HKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAM 460

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + ++M  + + PD  TYS +     R G +  A +  NQ++   +  +   Y+ +I   
Sbjct: 461 LIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGF 520

Query: 440 CKSNNLAAAKQLLSSMIVRGLI-PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           C    L  AK+L+S MI +G+  PDI+ + ++I+  CK G +  A  +++    + ++P 
Sbjct: 521 CMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPG 580

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           ++ +NS+I+G C    +D A  +L A + +G+  D +TYNTL++GYF NG+I +   +F 
Sbjct: 581 VITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFR 640

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK-N 616
           EM+  G+  N V Y I++  L + G    AR+    MI  G       Y  ++    + N
Sbjct: 641 EMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNN 700

Query: 617 CSPEEVI----------------------------------ELHDDMVLSGVSPDNQTYN 642
           C+ E +I                                  EL   +  SG+ P+  TY 
Sbjct: 701 CADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760

Query: 643 AIISPLLGEKSAED 656
            +I  LL +   ED
Sbjct: 761 VMIINLLKDGGVED 774



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 219/451 (48%), Gaps = 7/451 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--IWPNVVCFNMIINE 260
           L   M   G V N  ++++V+ ALC     + AL L   M K G    P+VV ++ +I+ 
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
               G+   A  LF +M   +   V P+ VT+N II+  CK   ++ AE +   M   G 
Sbjct: 275 FFNEGETGKACSLFHEM---TRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA 331

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY+ +I GYA  G  +EA ++  EM KRGL+PN V  NS +  L   G  + A  
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
               M  K   PD F+Y  L  G    GC      L N +    +  + + + ILI+   
Sbjct: 392 FFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYA 451

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A  + + M  +G+ PD++TY T+I  + + G +  A++ +  M     +PN  
Sbjct: 452 KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 501 IYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           +Y+SII G C    L  AK L+    ++ I   D + ++++IN    +G++ +A  +F  
Sbjct: 512 VYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDL 571

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
             ++G     + +N LI+  C  G   +A +++  M + G+ PD VTY TL+  + KN  
Sbjct: 572 ATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGR 631

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             + + L  +M   GV P+  TY  +++ L 
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 189/393 (48%), Gaps = 6/393 (1%)

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDS--VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           + AC       AL LF ++      +   +P   T+N +++  C+  R +    +   ++
Sbjct: 125 SSACITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCIL 184

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALR-LCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + G+  +  T  TL+        +EEA+  L   M + G +PN V Y+  +  L      
Sbjct: 185 RTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMS 244

Query: 376 EGALFVLSDMIDK--HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           + AL +L  M  +     PD   YS +  G    G   +A  L +++  + +  D  +YN
Sbjct: 245 QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ++I+ LCK+  +  A+ +L  M   G  PD +TY  +I GY   G ++ A +++  MKK 
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364

Query: 494 EKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEA 552
              PN+V  NS +  LCK   S +AA+     + +    D  +Y TL++GY   G  A+ 
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADM 424

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F+ M++ GIA N   + ILI+   K G    A  +   M   G+ PD VTY+T+++ 
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           FS+     + +E  + MV  G+ P+   Y++II
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSII 517



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 217/468 (46%), Gaps = 5/468 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G ++ A +    +  KGH   I ++   L              L+  M S G   N + F
Sbjct: 384 GRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVF 443

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            ++I+A  K   +++A+ ++  M + G+ P+VV ++ +I+   ++G L  A++ F +M V
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQM-V 502

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID-CNVRTYATLIDGYARGG 338
             G  + PN+  ++ II GFC  G +  A+E+   MI  GI   ++  ++++I+   + G
Sbjct: 503 ARG--IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDG 560

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              +A  + D     G  P  + +NS I      G ++ A  +L  M    + PD  TY+
Sbjct: 561 RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYN 620

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G  +NG +     L  ++  + +  +  +Y I++  L ++    AA++    MI  
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G    +  YG ++ G C+    + A+ +++ +  +  K ++ I N++IN + K    + A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K L       GLL +  TY  +I     +G + +A  MFS M   GI       N +I  
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRM 800

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           L + G   +A   +  +    I+ +  T + +++ FS+    +E I+L
Sbjct: 801 LLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKL 848



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 4/271 (1%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA-AAKQ 450
           P   TY+IL    CR         L   +L   +  D  + N L+  LC +N    A   
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIING 508
           LL  M   G +P+ ++Y  ++   C     + A+ + + M K      P++V Y+++I+G
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHG 274

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
              +     A SL     R G+  D +TYN +I+       + +A  +  +M   G   +
Sbjct: 275 FFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPD 334

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y+ +I+     G  ++A ++ + M   G+IP+ VT  + +    K+   +E  E  D
Sbjct: 335 TVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFD 394

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            M   G  PD  +Y  ++     E    D +
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMI 425


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 255/530 (48%), Gaps = 35/530 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  ++    ++G+ E A  +  ++   G   ++  +N+ L  L+  N+      LY  M
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC-------------- 253
              G + NV T+N+++ ALCK  +++ A  L+  M   G  P+ V               
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230

Query: 254 ----------------FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
                           +N +I+  C+ G +E A+KL   +G M  + V PN V+++CIIN
Sbjct: 231 DDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKL---LGEMMDNGVDPNVVSYSCIIN 287

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
             C  G VE A  +   M   G D N+ T+  LI G    G   EAL L   M++ G  P
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V YN+ IH L + G +E AL V   M      P+  TYSIL  G  ++G +  A +  
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETW 407

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           N+++      +  +Y  +++ LCK++    A  L+  M + G  P+ +T+ T I G C  
Sbjct: 408 NRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGN 467

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
           G +E A+++ E M+     PN+  YN +++ L +    + A  L Q  +   L  + +TY
Sbjct: 468 GRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM-KVMI 595
           NT++ G+   G + EA  +F +    G A + + YN +I+  CK G  + A +L+ +V  
Sbjct: 528 NTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSS 587

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +    PD +TYT+L+       + EE +   D  +  G+ P+  T+NA++
Sbjct: 588 MKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 215/449 (47%), Gaps = 9/449 (2%)

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S  +    +T+ ++I  L +EC+++    +  +M   GI      F  IIN   +VG  E
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            ALK+F ++G        P    +N +++      + +    +   M K G+  NV TY 
Sbjct: 127 QALKMFYRIGEFGCK---PTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYN 183

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+    +    + A +L  EM  +G  P+ V Y + +  L   G ++ A       +  
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA-----RELAG 238

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P    Y+ L  G+C+ G ++ A KL  ++++  +  +  SY+ +IN LC S N+  A
Sbjct: 239 RFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA 298

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L + M +RG   +I T+  LI G    G +  A+ +++ M +   +PN+V YN++I+G
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC + SL+ A  +    QR G L +  TY+ LI+G+  +G +  A   ++ M + G   N
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y  +++ LCK   + QA  L++ M L G  P+ +T+ T +     N   E  ++L +
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            M   G  P+  TYN ++  L      E+
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEE 507



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 211/475 (44%), Gaps = 57/475 (12%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIIN-------EACQVGDLEFALKLFRKMG-VMSGD 283
           L+E  SL  ++ K  I P V+  N IIN       +  Q  D+   LK  R +  V+   
Sbjct: 3   LKEGRSLLMKIQKPLI-PFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFF 61

Query: 284 SVLPNS-------VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           S + NS        T+  +I    +   ++  + I   M   GI+C    +  +I+GY R
Sbjct: 62  SAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKR 121

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            GS+E+AL++   + + G  P   +YN  +  L +E   +    + ++M    + P+ FT
Sbjct: 122 VGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFT 181

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+IL K LC+N  V  A KL  ++  +    DA +Y  +++ LCK+  +  A++L     
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-- 239

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK----- 511
                P +  Y  LIDG CK G IE A+++   M      PN+V Y+ IIN LC      
Sbjct: 240 ---FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296

Query: 512 --------------DASLDAAKSLLQASQRIGLL-----------------DAITYNTLI 540
                         DA++     L++     G L                 + + YNTLI
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G   NG + EA  +  +M+  G   N   Y+ILI+   K G    A E    MI HG  
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCR 416

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           P+ VTYT +V    KN   ++   L + M L G +P+  T+N  I  L G    E
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 127/249 (51%), Gaps = 6/249 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    +    + A  +++K+ ++G + +   +N F+  L     +    
Sbjct: 415 CRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAM 474

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL + M   G + N+ T+N ++ AL +  K EEA  L+  +    + PN+V +N ++   
Sbjct: 475 KLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGF 534

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI--RYAMIKAG 319
            + G +  AL+LF K  ++ G +  P+S+T+N +I+ +CK G+V+ A ++  R + +K  
Sbjct: 535 SRAGMMGEALQLFGK-ALVRGTA--PDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              ++ TY +LI G     + EEA+   D+ + +G+ PN   +N+ +   F      G +
Sbjct: 592 -HPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPI 650

Query: 380 FVLSDMIDK 388
            +L D++ K
Sbjct: 651 HILDDILRK 659


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 254/509 (49%), Gaps = 33/509 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+N+      L ++M + G   ++ T+++ I   C+  +L  AL++ 
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM------------------- 280
            +M+K G  P++V  + ++N  C    +  A+ L  +M  M                   
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 281 --SGDSVL-----------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + ++V            P+ VT+  ++NG CK G ++ A  +   M K  I+ +V  Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+IDG  +    ++AL L  EM  +G+ P+   Y+S I  L   G    A  +LSDMI+
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I P+  T+S L     + G + +A KL++++++  +  D ++Y+ LIN  C  + L  
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK +   MI +   P+++TY TLI G+CK   +E  ++++  M +     N V Y ++I+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G  +    D A+ + +    +G+  + +TYN L++G   NGK+A+A  +F  ++   +  
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YNI+I  +CK G  +   EL   + L G+ P+ + Y T+++ F +  S EE   L 
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             M   G  P++ TYN +I   L +   E
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDRE 590



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 244/487 (50%), Gaps = 8/487 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+   I   ++ L+       I     L  +MV  GY  +  TF  +I+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--GVMSG 282
            L    K  EA++L  +M++ G  P++V +  ++N  C+ GD++ AL L +KM  G +  
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           D V+     +N II+G CK   ++ A  +   M   GI  +V TY++LI      G   +
Sbjct: 257 DVVI-----YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A RL  +M++R + PN V +++ I     EG +  A  +  +MI + I PD FTYS L  
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C +  + +A  +   ++ +    +  +Y+ LI   CK+  +    +L   M  RGL+ 
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +TY TLI G+ +  + + A  V++ M  V   PN++ YN +++GLCK+  L  A  + 
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  QR  +  D  TYN +I G    GK+ + + +F  +   G++ N + YN +I+  C+ 
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  ++A  L+K M   G +P+  TY TL+    ++   E   EL  +M   G + D  T 
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611

Query: 642 NAIISPL 648
             + + L
Sbjct: 612 GLVTNML 618



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 247/507 (48%), Gaps = 42/507 (8%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           N LS ++K+++      L+ +MV      ++  FN ++ A+ K  K E  +SL  +M   
Sbjct: 56  NRLSDIIKVDDA---VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           GI  ++  +++ IN  C+   L  AL +  KM  +  +   P+ VT + ++NG+C   R+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE---PDIVTLSSLLNGYCHSKRI 169

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +   M++ G   +  T+ TLI G      + EA+ L D+MV+RG  P+ V Y + 
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++ L   GD++ AL +L  M    I  D   Y+ +  GLC+   +  A  L  ++  + +
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D ++Y+ LI+ LC     + A +LLS MI R + P+++T+  LID + K G +  A +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL----------------------- 522
           +Y+ M K    P++  Y+S+ING C    LD AK +                        
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409

Query: 523 -------------QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
                        + SQR  + + +TY TLI+G+F       A  +F +M +VG+  N +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YNIL++ LCK G   +A  + + +    + PD  TY  ++    K    E+  EL  ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
            L GVSP+   YN +IS    + S E+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEE 556



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 208/412 (50%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A  +++K++       +  +N  +  L K   +    
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM + G   +V T++ +I  LC   +  +A  L   M++  I PNVV F+ +I+  
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+  T++ +INGFC   R++ A+ +   MI     
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY+TLI G+ +    EE + L  EM +RGL+ N V Y + IH  F   D + A  V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + P+  TY+IL  GLC+NG + +A  +   +    M  D Y+YNI+I  +CK
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +    +L  ++ ++G+ P++I Y T+I G+C+ G+ E A  + + MK+    PN   
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D   +A+  L++  +  G     +   L+     +G++ ++F
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 627



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%)

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + +N L++      K     ++  +M+ +GI+ +   Y+I IN  C+      A  ++  
Sbjct: 84  VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M+  G  PD VT ++L+  +  +    + + L D MV  G  PD  T+  +I  L     
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203

Query: 654 AEDQV 658
           A + V
Sbjct: 204 ASEAV 208


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 253/475 (53%), Gaps = 4/475 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +  + ++   ++   K  +  + +  Y EM+      +V T++ +I ALCK   +++A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           + +   M+K+G+ PN + +N I++  C     + A+   +KM     D V P+ VT+N +
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM---RSDGVEPDVVTYNSL 307

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++  CK GR   A +I  +M K G++ ++ TY TL+ GYA  G+  E   L D MV+ G+
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P++ V+N  I     +  V+ A+ V S M    + P+  TY  +   LC++G V  A  
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
              Q+++E +  +   Y  LI+ LC  +    A++L+  M+ RG+  + I + ++I  +C
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHC 487

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           K G +  + ++++ M ++  KPN++ Y+++I+G C    +D A  LL +   +G+  D +
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCV 547

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYNTLINGY    ++ +A A+F EM + G++ N + YNI++  L        A+EL   +
Sbjct: 548 TYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI 607

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              G   +  TY  ++    KN   +E + +  ++ L+ +  + +T+N +I  LL
Sbjct: 608 TKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 261/542 (48%), Gaps = 5/542 (0%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALVRACTQIGATEGAYDV 168
           F   +LL G      S   LE L  + D      A   V +  ++    + G ++ AY  
Sbjct: 159 FSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
             ++  +  S  +  +++ ++ L K   + +  ++   MV  G + N  T+N +++  C 
Sbjct: 219 YHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCS 278

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             + +EA+    +M   G+ P+VV +N +++  C+ G    A K+F     M+   + P+
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDS---MTKRGLEPD 335

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T+  ++ G+   G +     +   M++ GI  +   +  LI  YA+    +EA+ +  
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +M + GL PN V Y + I  L   G V+ A+     MID+ + P+   Y+ L   LC   
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
              +A +L  ++L+  +  +   +N +I+  CK   +  +++L   M+  G+ P++ITY 
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDGYC  G ++ A ++  +M  V  KP+ V YN++ING C+ + +D A +L +     
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  + ITYN ++ G F   + A A  ++  +   G  +    YNI+++ LCK     +A
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             + + + L  +  +  T+  ++    K    +E  +L   +  +G+ PD +TY+ +   
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 695

Query: 648 LL 649
           L+
Sbjct: 696 LI 697



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 236/507 (46%), Gaps = 37/507 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++H +   +    +   +   +     +V  G+     TF  ++  LC + +  +A+ + 
Sbjct: 86  TVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIV 145

Query: 240 YR-MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
            R M +    P+V    +++   C     + AL+L   M    G    P+ V++  +ING
Sbjct: 146 LRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVING 205

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           F K G  + A    + M+   I  +V TY+++I    +G + ++A+ +   MVK G+MPN
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            + YNS +H   +    + A+  L  M    + PD  TY+ L   LC+NG   +A K+ +
Sbjct: 266 CMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFD 325

Query: 419 QVLEEHMVGDAYSY-----------------------------------NILINYLCKSN 443
            + +  +  D  +Y                                   NILI    K  
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  + S M   GL P+++TYG +I   CK G+++ A+  +E M      PN+++Y 
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445

Query: 504 SIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           S+I+ LC     D A+ L L+   R   L+ I +N++I+ +   G++ E+  +F  M  +
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N + Y+ LI+  C  G   +A +L+  M   G+ PD VTY TL+  + +    ++ 
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + L  +MV SGVSP+  TYN I+  L 
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLF 592



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 231/521 (44%), Gaps = 24/521 (4%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLL---------MGNLMSANSV--------SPL 129
           + R S  + +  +I+  L   +  D A+ +         M N M+ NS+         P 
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 130 EFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           E + G L         P V  +++L+    + G +  A  +   +  +G    I  +   
Sbjct: 284 EAI-GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTL 342

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L        +     L   MV  G   + + FN++I A  K+ K++EA+ ++ +M + G+
Sbjct: 343 LQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            PNVV +  +I   C+ G ++ A+  F +M     + + PN + +  +I+  C   + + 
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQM---IDEGLTPNIIVYTSLIHSLCIFDKWDK 459

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           AEE+   M+  GI  N   + ++I  + + G   E+ +L D MV+ G+ PN + Y++ I 
Sbjct: 460 AEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLID 519

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G ++ A  +LS M    + PD  TY+ L  G CR   +  A  L  +++   +  
Sbjct: 520 GYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSP 579

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +YNI++  L  +   AAAK+L   +   G   ++ TY  ++ G CK    + A++++
Sbjct: 580 NIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 639

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           +N+   + +     +N +I  L K    D AK L  A    GL+ D  TY+ +       
Sbjct: 640 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 699

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G + E   +F  M   G   N    N ++  L + G   +A
Sbjct: 700 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 182/376 (48%), Gaps = 3/376 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  +    + A  V  K++  G + ++  +   +  L K   +      +++M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N+  +  +I++LC   K ++A  L   ML  GI  N + FN II+  C+ G +
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + KLF    +M    V PN +T++ +I+G+C  G+++ A ++  +M   G+  +  TY
Sbjct: 493 IESEKLF---DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+GY R    ++AL L  EMV  G+ PN + YN  +  LF       A  +   +  
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITK 609

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                +  TY+I+  GLC+N    +A ++   +    +  +  ++NI+I  L K      
Sbjct: 610 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 669

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +++   GL+PD+ TY  + +   + G +E    ++ +M++     N  + NSI+ 
Sbjct: 670 AKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVR 729

Query: 508 GLCKDASLDAAKSLLQ 523
            L +   +  A + L 
Sbjct: 730 KLLQRGDITRAGTYLS 745



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 163/353 (46%), Gaps = 6/353 (1%)

Query: 312 RYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           R A   AG +   V TY  LI    R G  +        +VK+G     + +   +  L 
Sbjct: 74  RMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLC 133

Query: 371 AEGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-- 427
           A+     A+  VL  M +    PD F+ +IL KGLC     ++A +L + + ++   G  
Sbjct: 134 ADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA 193

Query: 428 -DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  SY  +IN   K  +   A      M+ R + PD++TY ++I   CKG  ++ A++V
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
              M K    PN + YNSI++G C       A   L+  +  G+  D +TYN+L++    
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           NG+  EA  +F  M   G+  +   Y  L+      G   +   L+ +M+ +GI PD+  
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +  L+  ++K    +E + +   M   G++P+  TY A+I  L    S +D +
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 160/357 (44%), Gaps = 24/357 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP--AVFDALVRAC 156
           A++ +L      DDA+L    ++           EGL         TP   V+ +L+ + 
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMID----------EGL---------TPNIIVYTSLIHSL 451

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
                 + A ++I ++  +G  ++   +N+ +    K   +    KL+  MV  G   NV
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T++ +I   C   K++EA  L   M   G+ P+ V +N +IN  C+V  ++ AL LF++
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M V SG  V PN +T+N I+ G     R   A+E+   + K+G    + TY  ++ G  +
Sbjct: 572 M-VSSG--VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
              ++EALR+   +    L      +N  I  L   G  + A  + + +    + PD  T
Sbjct: 629 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 688

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           YS++ + L   G +++   L   + E     ++   N ++  L +  ++  A   LS
Sbjct: 689 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLS 745



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  ++   +++ +     L+KEMVS G   N+ T+N+++  L    +   A  LY  + 
Sbjct: 549 YNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGIT 608

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           KSG    +  +N+I++  C+    + AL++F+ + +     +   + T N +I    K+G
Sbjct: 609 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD---LQLETRTFNIMIGALLKVG 665

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R + A+++  A+   G+  +VRTY+ + +     G  EE   L   M + G   N+ + N
Sbjct: 666 RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLN 725

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           S +  L   GD+  A   LS + +KH   +  T S+L
Sbjct: 726 SIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 236/492 (47%), Gaps = 44/492 (8%)

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S     + + +  L K+  + +      +MVS G+  +V T+  VI+ALC E +L EA  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
               M    + PNVV + ++I+  C+ G ++ A+ L  KM        +P +VT+N +I+
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR----KKCVPTAVTYNSLIS 123

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK  R   A ++   M+ +G   ++ TY TLI G+ +   S++ALR+ +++V RG  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKL 416
           + V Y+  I  L  EG ++ A+ +   MI    C P+  TY+ L  G CR G + +A  L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++ E     D  +Y  L+N  CK   L  A  LL+ M  +GL PD++T+ +L+DG C+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-------------- 522
              +  AV +   M++    P +  YN+I++G C+   L+ A+  +              
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFN 363

Query: 523 --------------------QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM-RN 561
                               +A +R    D + Y T+I+G     K+ EA  ++ +M   
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   N + Y+ LI  LC  G   +AR  ++     G +P+  TY  L+  F K    E+
Sbjct: 424 PGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDED 479

Query: 622 VIELHDDMVLSG 633
             EL DDMV  G
Sbjct: 480 ARELLDDMVQRG 491



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 126/499 (25%), Positives = 235/499 (47%), Gaps = 70/499 (14%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNL----MSANSVSPLEFLEGLLDSYEI---- 141
           F   + +  A++H L    R  +A   +  +    ++ N V+    ++GL     +    
Sbjct: 42  FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101

Query: 142 ---------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
                    C  T   +++L+    +      AYD+++++   G    I  +   ++   
Sbjct: 102 ALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 161

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNV 251
           K  +     ++++++V+ G+  +V T++ +I  LCKE +L+EA+ L+ RM+KSG   PN 
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           V +N +I+  C++G ++ A+ L  +M   +G S  P+ VT+  ++NGFCKL R++ A ++
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMA-ETGSS--PDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M + G+  +V T+ +L+DG  R     +A+ +  EM ++   P              
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT------------- 325

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE-HMVGDAY 430
                                  +TY+ +  G CR   +++A K    +LEE     +  
Sbjct: 326 ----------------------VYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNVV 360

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           S+NI+I  LCK N  + A +L+     R   PD++ Y T+IDG C+   ++ A +VY  M
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420

Query: 491 KKVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFIN 546
             +E+    PN + Y+++I GLC    LD A+  ++     G +  I TYN LI+ +   
Sbjct: 421 --LEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKA 474

Query: 547 GKIAEAFAMFSEMRNVGIA 565
            +  +A  +  +M   G  
Sbjct: 475 NRDEDARELLDDMVQRGFG 493



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 189/413 (45%), Gaps = 36/413 (8%)

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +++ +S   + VT+  +I G CK+ R+E A      M+  G   +V TY  +I       
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              EA +  +EM  R L PN V Y   I  L   G V+ A+ +LS M  K + P   TY+
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC+     +A+ L  +++    + D ++Y  LI   CKS     A ++   ++ R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNLVIYNSIINGLCKDASLDA 517
           G  PD++TY  LIDG CK G ++ A+ ++  M K     PN V YNS+I+G C+   +D 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 518 AKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A +LL+     G   D +TY TL+NG+    ++ +A+ + ++M   G+  + V +  L++
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK---------------NCSP-- 619
            LC+      A  ++  M      P   TY T++  + +               +C P  
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNV 359

Query: 620 ----------------EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                            E +EL ++      +PD   Y  +I  L  EK  ++
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V Y S I  L     +E AL  L  M+ K   PD +TY+ +   LC    + +A K   +
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +   ++  +  +Y +LI+ LCK   +  A  LLS M  +  +P  +TY +LI G CK   
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNT 538
              A  + E M      P++  Y ++I G CK   S DA +   Q   R    D +TY+ 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAV-NKVGYNILINFLCKFGCYQQARELMKVMILH 597
           LI+G    G++ EA  +F  M   G  + N V YN LI+  C+ G   +A  L++ M   
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G  PD VTYTTL+  F K    ++  +L + M   G++PD  T+ +++  L  E    D 
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 658 V 658
           V
Sbjct: 311 V 311



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 2/197 (1%)

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D +TY +LI G CK   +E A+     M      P++  Y ++I+ LC +  L  A+  L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +      L  + +TY  LI+G    G++ EA A+ S+MR   +    V YN LI+ LCK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKA 128

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
               +A +L++ M+  G IPD  TYTTL+T F K+   ++ + + + +V  G  PD  TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 642 NAIISPLLGEKSAEDQV 658
           + +I  L  E   ++ +
Sbjct: 189 SCLIDGLCKEGRLKEAI 205


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 247/479 (51%), Gaps = 19/479 (3%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           ++++  G   ++  +N  +    KL      +   + M   G   N+ TFN++I  LC++
Sbjct: 7   KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +L+E   +   M + G  P+ V +N ++N  C+ G+   AL L  +M V +G S  PN 
Sbjct: 67  GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM-VRNGLS--PNV 123

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+  +IN  CK G +  A E    M   G+  N RTY T+I+G+A+ G  +EA R+ +E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M + G +P+ V YN+ I+     G +E A+ +L DM+ K + PD  +YS +  G  RN  
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           + +AF++  +++ + ++ DA +Y+ LI  LC+   L  A  +   M+   L PD  TY T
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRI 528
           LI+ YCK G++  A+ +++ M +    P+ V YN +INGL K A S +A + LL+     
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDD 363

Query: 529 GLLDAITYNTLI---------------NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
            +  A+TYNTLI                G+ + G + EA  +F  M N     N+  YN+
Sbjct: 364 SIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNV 423

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           +I+  C+ G   +A +L K M+    +P  VT   LV          E+ E+  D++ S
Sbjct: 424 IIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRS 482



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 211/427 (49%), Gaps = 19/427 (4%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            L  +  M ++G  PNVV +N +I+  C++   + A    R MG+     + PN +T N 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGL---KGLEPNLITFNM 58

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           IING C+ GR++   E+   M + G   +  TY TL++GY + G+  +AL L  EMV+ G
Sbjct: 59  IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L PN V Y S I+ +   G++  A+     M  + +CP+  TY+ +  G  + G + +A+
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           ++ N++     +    +YN LIN  C    +  A  LL  M+ +G++PD+++Y T+I G+
Sbjct: 179 RVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
            +   ++ A Q+   M      P+ V Y+S+I GLC+   L  A  + Q    I L  D 
Sbjct: 239 ARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDE 298

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TY TLIN Y   G + +A  +  EM   G   + V YN+LIN L K    ++AR L+  
Sbjct: 299 FTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLK 358

Query: 594 MILHGIIPDYVTYTT---------------LVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           +     IP  VTY T               LV  F      +E  ++ + M+     P+ 
Sbjct: 359 LFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNE 418

Query: 639 QTYNAII 645
             YN II
Sbjct: 419 AIYNVII 425



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 181/335 (54%), Gaps = 1/335 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G   NV TY T+IDGY +   ++EA      M  +GL PN + +N  I+ L  +G 
Sbjct: 9   MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    VL +M  K   PD  TY+ L  G C+ G   QA  LH +++   +  +  +Y  
Sbjct: 69  LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN +CK+ NL  A +    M VRGL P+  TY T+I+G+ + G ++ A +V   M +  
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P++V YN++ING C    ++ A  LLQ     G+L D ++Y+T+I+G+  N ++  AF
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            M  EM    +  + V Y+ LI  LC+     +A ++ + M+   + PD  TYTTL+  +
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            K     + + LHD+M+  G  PD  TYN +I+ L
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 144/262 (54%), Gaps = 1/262 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ +  G C+     +AF     +  + +  +  ++N++IN LC+   L    ++
Sbjct: 16  PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M  +G +PD +TY TL++GYCK GN   A+ ++  M +    PN+V Y S+IN +CK
Sbjct: 76  LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             +L+ A          GL  +  TY T+ING+   G + EA+ + +EM   G   + V 
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN LIN  C  G  ++A  L++ M+  G++PD V+Y+T+++ F++N   +   ++  +M+
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255

Query: 631 LSGVSPDNQTYNAIISPLLGEK 652
              V PD  TY+++I  L  ++
Sbjct: 256 GKSVLPDAVTYSSLIQGLCEQR 277



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 36/372 (9%)

Query: 133 EGLLD-SYEICKAT------PAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           +GLLD +Y +          P++  ++AL+     +G  E A  ++Q +  KG    + +
Sbjct: 171 QGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVS 230

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           ++  +S   +  E+ R +++  EM+    + +  T++ +I  LC++ +L EA  ++  ML
Sbjct: 231 YSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
              + P+   +  +IN  C+ GDL  AL L  +M +  G   LP++VT+N +ING  K  
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEM-IQKG--FLPDAVTYNVLINGLNKQA 347

Query: 304 RVEFAEEIRYAMIKAGID----------------CNV--RTYATLIDGYARGGSSEEALR 345
           R   ++E R  ++K   D                CN+  ++   L+ G+   G  +EA +
Sbjct: 348 R---SKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQ 404

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           + + M+ +   PN  +YN  IH     G+V  A  +  +M+     P   T   L K L 
Sbjct: 405 VFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALF 464

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
             G   +  ++   +L    + DA    +L+    K  N+     LL+ M   GLIP   
Sbjct: 465 TEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP--- 521

Query: 466 TYGTLIDGYCKG 477
           + GT  +   +G
Sbjct: 522 STGTPTNAIARG 533



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 173/395 (43%), Gaps = 53/395 (13%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +L+ +  + G    A +   ++ V+G   +   +   ++   +   +   +++  EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G++ ++ T+N +I   C   ++EEA+ L   M+  G+ P+VV ++ II+   +  +L
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M    G SVLP++VT++ +I G C+  R+  A ++   M+   +  +  TY
Sbjct: 245 DRAFQMKVEM---IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE--------------- 372
            TLI+ Y + G   +AL L DEM+++G +P+ V YN  I+ L  +               
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 373 -----------------------------------GDVEGALFVLSDMIDKHICPDHFTY 397
                                              G ++ A  V   MI+K+  P+   Y
Sbjct: 362 DDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIY 421

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +++  G CR G V +A+KL+ +++    V    +   L+  L          +++  ++ 
Sbjct: 422 NVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILR 481

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              + D      L++   K GN++    +   M K
Sbjct: 482 SCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAK 516


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 237/471 (50%), Gaps = 4/471 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  L+ + ++        LYK+M S G   N  T N++I + C   +L  A S+ 
Sbjct: 53  SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 112

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +LK G  P+   F  +I   C  G +  AL+LF K   M+G+   P+ +T+  +ING 
Sbjct: 113 GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK---MTGEGFQPDVLTYGTLINGL 169

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A     +M +      V  Y+T+ID   +     EAL L  +M+ +G+ PNN
Sbjct: 170 CKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNN 229

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             Y+S IH L   G  + A+ +   MI + I PD  T++ L   LC+ G V +A  + + 
Sbjct: 230 FTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV 289

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +++  +  D  +YN L++  C  + +     +  +M+ +G +P +I+Y TLI+GYCK   
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A+ ++E M +    P+ V YN++I+GLC    L  A +L       G + D +TY  
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L +    N ++AEA  +   +    +  +   Y+I+++ +C+ G  + AR+L   +   G
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + PD  TYT ++    +     E  +L  +M  +G SP+  TYN I    L
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFL 520



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 236/463 (50%), Gaps = 4/463 (0%)

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
           F S  + +N I     L+  M+      ++  F+ ++ ++ +       LSLY +M   G
Sbjct: 25  FHSKSLNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFG 84

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I  N    N++IN  C +  L FA   F  +G +      P++ T   +I G C  G++ 
Sbjct: 85  IPHNTYTLNILINSFCHLNRLGFA---FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIG 141

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A ++   M   G   +V TY TLI+G  + G++  A+R    M +R   P  VVY++ I
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTII 201

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             L  +  +  AL + SDM+ K I P++FTYS L  GLC  G  K+A +L   ++   ++
Sbjct: 202 DSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  ++N L++ LCK   +  A  ++  MI   L PD++TY +L+DG+C    +   V V
Sbjct: 262 PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNV 321

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFI 545
           ++ M +    P+++ Y ++ING CK   +D A  L +   + GL+ D +TYNTLI+G   
Sbjct: 322 FDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 381

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G++ +A A+F EM   G   + V Y IL ++LCK     +A  L+KV+    + PD   
Sbjct: 382 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 441

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           Y+ ++    +    E   +L   +   G+ PD +TY  +I+ L
Sbjct: 442 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGL 484



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 248/509 (48%), Gaps = 6/509 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           +  P++  F  L+ + T++        + +++   G   + +  N  ++    LN +G  
Sbjct: 49  RPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFA 108

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +  +++  GY  +  TF  +I  LC E K+ EAL L+ +M   G  P+V+ +  +IN 
Sbjct: 109 FSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLING 168

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+VG+   A++  R    M   +  P  V ++ II+  CK  ++  A  +   M+  GI
Sbjct: 169 LCKVGNTSTAIRFLRS---MEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGI 225

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY++LI G    G  +EA+RL   M+ R +MP+ + +N+ +  L  EG V  A +
Sbjct: 226 SPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHY 285

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V+  MI   + PD  TY+ L  G C    + +   + + ++ +  V    SY  LIN  C
Sbjct: 286 VVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYC 345

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A  L   M  +GLIPD +TY TLI G C  G +  A+ ++  M    + P+LV
Sbjct: 346 KIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLV 405

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  + + LCK+  L  A  LL+  +   L  D   Y+ +++G    G++  A  +FS++
Sbjct: 406 TYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKL 465

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
            + G+  +   Y I+IN LC+ G   +A +L   M  +G  P+  TY  +   F +N   
Sbjct: 466 SSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNET 525

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              I+L  +M+  G S D  T   ++  L
Sbjct: 526 LRAIQLFQEMLSRGFSIDVSTTTLLVEML 554



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 220/450 (48%), Gaps = 4/450 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + + A F  L+R     G    A  +  K+  +G    +  +   ++ L K+       +
Sbjct: 121 QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR 180

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
             + M        V  ++ +I +LCK+ +L EALSL+  ML  GI PN   ++ +I+  C
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 240

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G  + A++LF     M    ++P+ +T N +++  CK G V  A  +   MI++ +  
Sbjct: 241 ILGHWKEAIRLFY---AMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKP 297

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY +L+DG+       + + + D MV++G +P+ + Y + I+       ++ A+ + 
Sbjct: 298 DVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLF 357

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  + + PD  TY+ L  GLC  G ++ A  L ++++    + D  +Y IL +YLCK+
Sbjct: 358 EEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKN 417

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           + LA A  LL  +    L PDI  Y  ++DG C+ G +E A  ++  +      P++  Y
Sbjct: 418 HRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTY 477

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +INGLC+   L  A  L       G   +A TYN +  G+  N +   A  +F EM +
Sbjct: 478 TIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLS 537

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELM 591
            G +++     +L+  L   G  Q  ++++
Sbjct: 538 RGFSIDVSTTTLLVEMLSDDGLDQSVKQIL 567



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 178/368 (48%), Gaps = 5/368 (1%)

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
            N+ + + FL  +      C+ T  V+  ++ +  +      A  +   +  KG S +  
Sbjct: 173 GNTSTAIRFLRSM--EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNF 230

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +++ +  L  L       +L+  M+    + +  TFN ++ ALCKE  + +A  +   M
Sbjct: 231 TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVM 290

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           ++S + P+VV +N +++  C   ++   + +F  M V  G   +P+ +++  +ING+CK+
Sbjct: 291 IQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM-VRKG--CVPSVISYTTLINGYCKI 347

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
             ++ A  +   M + G+  +  TY TLI G    G   +A+ L  EMV  G +P+ V Y
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
                +L     +  A+ +L  +   ++ PD   YSI+  G+CR G ++ A  L +++  
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 467

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  D  +Y I+IN LC+   LA A +L   M   G  P+  TY  +  G+ +      
Sbjct: 468 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLR 527

Query: 483 AVQVYENM 490
           A+Q+++ M
Sbjct: 528 AIQLFQEM 535



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 3/309 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ LV A  + G    A+ V+  +        +  +N+ +      +E+G+   ++  M
Sbjct: 266 TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G V +V ++  +I   CK   +++A+ L+  M + G+ P+ V +N +I+  C VG L
Sbjct: 326 VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A+ LF +M V      +P+ VT+  + +  CK  R+  A  +   +    +D ++  Y
Sbjct: 386 RDAIALFHEMVVYGQ---IPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + ++DG  R G  E A  L  ++  +GL P+   Y   I+ L  +G +  A  +  +M +
Sbjct: 443 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 502

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P+  TY+++T+G  RN    +A +L  ++L      D  +  +L+  L       +
Sbjct: 503 NGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQS 562

Query: 448 AKQLLSSMI 456
            KQ+L   +
Sbjct: 563 VKQILCEFV 571



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 3/214 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   +  L+    +I   + A  + +++  +G       +N  +  L  +  +    
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EMV  G + ++ T+ ++   LCK  +L EA+ L   +  + + P++  ++++++  
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 449

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G+LE A  LF K   +S   + P+  T+  +ING C+ G +  A ++   M + G  
Sbjct: 450 CRAGELEAARDLFSK---LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCS 506

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
            N  TY  +  G+ R   +  A++L  EM+ RG 
Sbjct: 507 PNACTYNLITRGFLRNNETLRAIQLFQEMLSRGF 540



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 1/243 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A  L N++L          ++ L+  + +  + +    L   M   G+  +  T   
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+ +C    +  A  V  ++ K+  +P+   + ++I GLC +  +  A  L       G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D +TY TLING    G  + A      M         V Y+ +I+ LCK     +A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   M+  GI P+  TY++L+         +E I L   M+   + PD  T+N ++  L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 649 LGE 651
             E
Sbjct: 275 CKE 277



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 3/206 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             ++ L+     +G    A  +  ++ V G    +  +     +L K + +     L K 
Sbjct: 370 VTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKV 429

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +       +++ +++V+  +C+  +LE A  L+ ++   G+ P+V  + ++IN  CQ G 
Sbjct: 430 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L  A KLF   G M  +   PN+ T+N I  GF +      A ++   M+  G   +V T
Sbjct: 490 LAEASKLF---GEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVST 546

Query: 327 YATLIDGYARGGSSEEALRLCDEMVK 352
              L++  +  G  +   ++  E V+
Sbjct: 547 TTLLVEMLSDDGLDQSVKQILCEFVQ 572


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 252/496 (50%), Gaps = 18/496 (3%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  + +K++++   ++I+++N  +      +++      + ++   G+  +V TFN +++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 225 ALCKECKLEEAL----------SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
            LC E ++ EAL          SL+ +M++ G+ P V+ FN +IN  C  G +  A  L 
Sbjct: 185 GLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            KM    G  +  + VT+  I+NG CK+G  + A  +   M +  I  +V  Y+ +ID  
Sbjct: 245 NKM---VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 301

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G   +A  L  EM+++G+ PN   YN  I    + G    A  +L DMI++ I PD 
Sbjct: 302 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 361

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            T++ L     + G + +A KL +++L   +  D  +YN +I   CK N    AK +   
Sbjct: 362 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 421

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M      PD++T+ T+ID YC+   ++  +Q+   + +     N   YN++I+G C+  +
Sbjct: 422 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 477

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L+AA+ L Q     G+  D IT N L+ G+  N K+ EA  +F  ++   I ++ V YNI
Sbjct: 478 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 537

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I+ +CK     +A +L   + +HG+ PD  TY  +++ F    +  +   L   M  +G
Sbjct: 538 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 597

Query: 634 VSPDNQTYNAIISPLL 649
             PDN TYN +I   L
Sbjct: 598 HEPDNSTYNTLIRGCL 613



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 246/481 (51%), Gaps = 14/481 (2%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +   V++N       LY++M       N+ +FN++I   C   KL  +LS + ++ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD--------SVLPNSVTHNCII 296
            G  P+VV FN +++  C    +  AL LF  M V +G          + P  +T N +I
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYM-VETGSLFDQMVEIGLTPVVITFNTLI 228

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           NG C  GRV  A  +   M+  G+  +V TY T+++G  + G ++ AL L  +M +  + 
Sbjct: 229 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 288

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ V+Y++ I  L  +G    A ++ S+M++K I P+ FTY+ +  G C  G    A +L
Sbjct: 289 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 348

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
              ++E  +  D  ++N LI+   K   L  A++L   M+ R + PD +TY ++I G+CK
Sbjct: 349 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 408

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
               + A  +++ M      P++V +N+II+  C+   +D    LL+   R GL+ +  T
Sbjct: 409 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 464

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           YNTLI+G+     +  A  +F EM + G+  + +  NIL+   C+    ++A EL +V+ 
Sbjct: 465 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 524

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +  I  D V Y  ++    K    +E  +L   + + GV PD QTYN +IS   G+ +  
Sbjct: 525 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 584

Query: 656 D 656
           D
Sbjct: 585 D 585



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 220/443 (49%), Gaps = 8/443 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +MV  G    V TFN +I  LC E ++ EA +L  +M+  G+  +VV +  I+N  C
Sbjct: 208 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 267

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++GD + AL L  KM       + P+ V ++ II+  CK G    A+ +   M++ GI  
Sbjct: 268 KMGDTKSALNLLSKM---EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 324

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY  +IDG+   G   +A RL  +M++R + P+ + +N+ I     EG +  A  + 
Sbjct: 325 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 384

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ + I PD  TY+ +  G C++      F     + +     D  ++N +I+  C++
Sbjct: 385 DEMLHRCIFPDTVTYNSMIYGFCKH----NRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 440

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +    QLL  +  RGL+ +  TY TLI G+C+  N+  A  +++ M      P+ +  
Sbjct: 441 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 500

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N ++ G C++  L+ A  L +  Q   + LD + YN +I+G     K+ EA+ +F  +  
Sbjct: 501 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 560

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  +   YN++I+  C       A  L   M  +G  PD  TY TL+    K    ++
Sbjct: 561 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 620

Query: 622 VIELHDDMVLSGVSPDNQTYNAI 644
            IEL  +M  +G S D  T   +
Sbjct: 621 SIELISEMRSNGFSGDAFTIKMV 643



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 236/496 (47%), Gaps = 19/496 (3%)

Query: 60  NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           N+L++ +  E R S  LAL F   V   + F   +E    +  +++ +    + L L G 
Sbjct: 180 NTLLHGLCLEDRISEALAL-FGYMVETGSLFDQMVE--IGLTPVVITFNTLINGLCLEGR 236

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           ++ A ++      +GL             +  +V    ++G T+ A +++ K++      
Sbjct: 237 VLEAAALVNKMVGKGL-------HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
            +  ++  +  L K         L+ EM+  G   NV T+N +I   C   +  +A  L 
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M++  I P+V+ FN +I+ + + G L  A KL  +M       + P++VT+N +I GF
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM---LHRCIFPDTVTYNSMIYGF 406

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK  R + A+ +   M       +V T+ T+ID Y R    +E ++L  E+ +RGL+ N 
Sbjct: 407 CKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 462

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YN+ IH      ++  A  +  +MI   +CPD  T +IL  G C N  +++A +L   
Sbjct: 463 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 522

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +    +  D  +YNI+I+ +CK + +  A  L  S+ + G+ PD+ TY  +I G+C    
Sbjct: 523 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 582

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           I  A  ++  MK    +P+   YN++I G  K   +D +  L+   +  G   DA T   
Sbjct: 583 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK- 641

Query: 539 LINGYFINGKIAEAFA 554
           ++     +G++ ++F+
Sbjct: 642 MVADLITDGRLDKSFS 657



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 113/229 (49%), Gaps = 11/229 (4%)

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           A   N +I    + N    A  L   M +R +  +I ++  LI  +C    +  ++  + 
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAA----------KSLLQASQRIGLLD-AITYN 537
            + K+  +P++V +N++++GLC +  +  A           SL      IGL    IT+N
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFN 225

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLING  + G++ EA A+ ++M   G+ ++ V Y  ++N +CK G  + A  L+  M   
Sbjct: 226 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 285

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            I PD V Y+ ++ R  K+    +   L  +M+  G++P+  TYN +I 
Sbjct: 286 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 334


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 170/652 (26%), Positives = 300/652 (46%), Gaps = 77/652 (11%)

Query: 46  RKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
           +K   L+ + PS+  S ++ + +     P+ AL F+ W+G+ + F H+++S  +++++LV
Sbjct: 63  QKHPSLKNLIPSIAPSHISALFA-LNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILV 121

Query: 106 --NWRRFDD---ALLLMGNLMSANSVSPLEFLEGL---LDSYEI-----C---------- 142
              + R  +    L++     S N++  LE L  +   +D+++      C          
Sbjct: 122 PNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSR 181

Query: 143 -----------------KATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                              TP +F  + +V    ++G    A   + K+   G S+    
Sbjct: 182 FLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFT 241

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           + + +    +   +     ++  M + G + N  ++  +I+  C+  +++EAL L+ +M 
Sbjct: 242 YTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMH 301

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG------------------------- 278
           +   WP V  + +II   CQ+G    AL +F++M                          
Sbjct: 302 EDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFD 361

Query: 279 ----VMSG---DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
               +++G     ++P+ VT+N +I+G+CK G    A EI   M       N RTY  LI
Sbjct: 362 DAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G+ RG +  +A+ L  +M++R L PN V YN  IH    EGD+  A  +LS M +  + 
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD +TYS+    LC+ G V++A  L   + E+ +  +   Y+ LI+  CK   ++  + L
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFL 541

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M+  G +P+ ITY +LIDGYCK  N + A  + + M K + +P    Y  +I+ L K
Sbjct: 542 LDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLK 601

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           D   D A  +       G   D   Y   I+ Y  +G++ +A  +  +M   GI  + + 
Sbjct: 602 DDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTML 661

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           Y + I+   +FG    A  ++K M   G  P Y TY+ L+   S N  P+EV
Sbjct: 662 YTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLS-NAKPKEV 712



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 203/378 (53%), Gaps = 1/378 (0%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M  D V PN  T N ++NG+CKLG V  AE     +++AG+  +  TY +LI GY R  +
Sbjct: 195 MLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKN 254

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            + A  +   M  +G + N V Y + IH       V+ AL + S M + +  P   TY++
Sbjct: 255 VDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTV 314

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +   LC+ G   +A  +  ++ E+H   + ++Y +LI  LC+ +N   AK++L+ M+ +G
Sbjct: 315 IIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKG 374

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           LIP ++TY  LIDGYCK G    A+++   M+     PN   YN +I G C+  ++  A 
Sbjct: 375 LIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAM 434

Query: 520 SLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           SLL    +R    + +TYN LI+G    G +  A+ + S M   G+  ++  Y++ I+ L
Sbjct: 435 SLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTL 494

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G  ++AR L + +   GI  + V Y+TL+  + K     +   L D M+ +G  P++
Sbjct: 495 CKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNS 554

Query: 639 QTYNAIISPLLGEKSAED 656
            TYN++I     EK+ ++
Sbjct: 555 ITYNSLIDGYCKEKNFKE 572



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 244/548 (44%), Gaps = 64/548 (11%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H     RR D+AL L   +   N                 C  T   +  ++ A  Q+
Sbjct: 280 LIHGFCEARRVDEALKLFSQMHEDN-----------------CWPTVRTYTVIIFALCQL 322

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A ++ +++  K    ++H +   +  L + +      K+   M+  G + +V T+
Sbjct: 323 GRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTY 382

Query: 220 NLVIYALCKE--------------------------------CK---LEEALSLYYRMLK 244
           N +I   CK+                                C+   + +A+SL ++ML+
Sbjct: 383 NALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE 442

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
             + PNVV +N++I+  C+ GDL  A KL   + +M+   ++P+  T++  I+  CK G 
Sbjct: 443 RKLQPNVVTYNILIHGQCKEGDLGSAYKL---LSLMNESGLVPDEWTYSVFIDTLCKRGL 499

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           VE A  +  ++ + GI  N   Y+TLIDGY + G   +   L D+M+  G +PN++ YNS
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I     E + + A  ++  MI + I P   TY+IL   L ++    QA  + +Q+L   
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              D + Y   I+  C    L  A+ L+  M  +G++PD + Y   ID Y + G+I+GA 
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYF 544
            + + M +V  +P+   Y+ +I    K  S    K +  +S+   L   +  N   N + 
Sbjct: 680 GILKRMHEVGCEPSYYTYSCLI----KHLSNAKPKEVSSSSELSDLSSGVASNDFSNCW- 734

Query: 545 INGKIAEAFA--MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              ++   F   +F +M   G A N   Y   I  LCK GC + A  L   M   G  P+
Sbjct: 735 --RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPN 792

Query: 603 YVTYTTLV 610
              Y +L+
Sbjct: 793 EDIYNSLL 800



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 230/521 (44%), Gaps = 39/521 (7%)

Query: 125 SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           S S LE L  L++S   C      ++ L+    +      A  ++ K+  +    ++  +
Sbjct: 395 SASALEIL-SLMESNN-CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTY 452

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +    K  ++G  +KL   M   G V +  T+++ I  LCK   +EEA SL+  + +
Sbjct: 453 NILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKE 512

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            GI  N V ++ +I+  C+VG +     L  KM  +S   V PNS+T+N +I+G+CK   
Sbjct: 513 KGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM--LSAGCV-PNSITYNSLIDGYCKEKN 569

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
            + A  +   MIK  I+    TY  LID   +    ++A  + D+M+  G  P+  +Y +
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            IH   + G ++ A  ++  M  K I PD   Y++      R G +  AF +  ++ E  
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689

Query: 425 MVGDAYSYNILINYLCK--------------------SNNLAAAKQ---------LLSSM 455
                Y+Y+ LI +L                      SN+ +   +         L   M
Sbjct: 690 CEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKM 749

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              G  P+  TYG  I G CK G +E A +++++MK+  + PN  IYNS++   C+    
Sbjct: 750 AEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLY 809

Query: 516 DAAKSLLQ---ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
             A   L     ++ +  LD+     L+ G +  G   +A  +F          +++ + 
Sbjct: 810 GEAIRWLDIMIENRHLPHLDSC--KLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWK 867

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
           +LI+ L K G   +  +L  +M   G      TY+ L+  F
Sbjct: 868 VLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 174/408 (42%), Gaps = 27/408 (6%)

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG------ 319
           D + AL  F  +G   G     N  +H  ++N     G +  AE +R  MIK+       
Sbjct: 89  DPQTALAFFNWIGQKHG--FKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENA 146

Query: 320 ------------------IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
                                 +R Y  L+   +R    +E   +  EM+   + PN   
Sbjct: 147 LFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFT 206

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
            N+ ++     G+V  A   +S ++   +  D FTY+ L  G CRN  V  A  +   + 
Sbjct: 207 LNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMP 266

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
            +  + +  SY  LI+  C++  +  A +L S M      P + TY  +I   C+ G   
Sbjct: 267 NKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKT 326

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLI 540
            A+ +++ M +   +PN+  Y  +I  LC+D++ D AK +L      GL+ + +TYN LI
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +GY   G  A A  + S M +   + N   YN LI   C+     +A  L+  M+   + 
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+ VTY  L+    K        +L   M  SG+ PD  TY+  I  L
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTL 494


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 254/517 (49%), Gaps = 41/517 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+N+      L + M +     ++ ++N++I   C+  +L  AL++ 
Sbjct: 63  SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 122

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII--- 296
            +M+K G  P++V  + ++N  C    +  A+ L  +M VM      PN+VT N +I   
Sbjct: 123 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ---PNTVTFNTLIHGL 179

Query: 297 --------------------------------NGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
                                           NG CK G ++ A  +   M K  I+ +V
Sbjct: 180 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 239

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             Y T+ID      +  +AL L  EM  +G+ PN V YNS I  L   G    A  +LSD
Sbjct: 240 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 299

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           MI++ I P+  T+S L     + G + +A KL++++++  +  D ++Y+ LIN  C  + 
Sbjct: 300 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 359

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  AK +   MI +   P+++TY TLI G+CK   +E  ++++  M +     N V YN+
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 419

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I GL +    D A+ + +     G+  D ITY+ L++G    GK+ +A  +F  ++   
Sbjct: 420 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 479

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  +   YNI+I  +CK G  +   +L   + L G+ P+ + YTT+++ F +    EE  
Sbjct: 480 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 539

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
            L  +M   G  P++ TYN +I   L  G+K+A  ++
Sbjct: 540 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 576



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 224/455 (49%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EMV    + ++  FN ++ A+ K  K +  +SL  RM    I  ++  +N++IN  C
Sbjct: 51  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 110

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  AL +  KM  +  +   P+ VT + ++NG+C   R+  A  +   M       
Sbjct: 111 RRSQLPLALAVLGKMMKLGYE---PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 167

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  T+ TLI G      + EA+ L D MV RG  P+   Y + ++ L   GD++ AL +L
Sbjct: 168 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 227

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M    I  D   Y+ +   LC    V  A  L  ++  + +  +  +YN LI  LC  
Sbjct: 228 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 287

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + A +LLS MI R + P+++T+  LID + K G +  A ++Y+ M K    P++  Y
Sbjct: 288 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 347

Query: 503 NSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +S+ING C    LD AK + +    +    + +TYNTLI G+    ++ E   +F EM  
Sbjct: 348 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 407

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N V YN LI  L + G    A+++ K M+  G+ PD +TY+ L+    K    E+
Sbjct: 408 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 467

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + + + +  S + PD  TYN +I  +      ED
Sbjct: 468 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 502



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 233/487 (47%), Gaps = 8/487 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+   I   ++ L+       I     L  +M    Y  N  TFN +I+
Sbjct: 118 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 177

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--GVMSG 282
            L    K  EA++L  RM+  G  P++  +  ++N  C+ GD++ AL L +KM  G +  
Sbjct: 178 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 237

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           D V+     +  II+  C    V  A  +   M   GI  NV TY +LI      G   +
Sbjct: 238 DVVI-----YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 292

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A RL  +M++R + PN V +++ I     EG +  A  +  +MI + I PD FTYS L  
Sbjct: 293 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 352

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C +  + +A  +   ++ +    +  +YN LI   CK+  +    +L   M  RGL+ 
Sbjct: 353 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 412

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +TY TLI G  + G+ + A ++++ M      P+++ Y+ +++GLCK   L+ A  + 
Sbjct: 413 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 472

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  Q+  +  D  TYN +I G    GK+ + + +F  +   G+  N + Y  +I+  C+ 
Sbjct: 473 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  ++A  L + M   G +P+  TY TL+    ++       EL  +M   G   D  T 
Sbjct: 533 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 592

Query: 642 NAIISPL 648
           + +I+ L
Sbjct: 593 SMVINML 599



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 210/413 (50%), Gaps = 5/413 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A  +++K++       +  +   +  L     +    
Sbjct: 200 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 259

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM + G   NV T+N +I  LC   +  +A  L   M++  I PNVV F+ +I+  
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+  T++ +INGFC   R++ A+ +   MI     
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 376

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY TLI G+ +    EE + L  EM +RGL+ N V YN+ I  LF  GD + A  +
Sbjct: 377 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 436

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC+ G +++A  +   + +  M  D Y+YNI+I  +CK
Sbjct: 437 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 496

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P++I Y T+I G+C+ G  E A  ++  MK+    PN   
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +  G + DA T + +IN    +G++ +++
Sbjct: 557 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 608



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 174/365 (47%), Gaps = 25/365 (6%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           AL  +T + +N     ++ +  +++  L N+ R+ DA  L+ +++               
Sbjct: 258 ALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER------------- 303

Query: 137 DSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
                 K  P V  F AL+ A  + G    A  +  ++  +     I  +++ ++     
Sbjct: 304 ------KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 357

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           + +     +++ M+S     NV T+N +I   CK  ++EE + L+  M + G+  N V +
Sbjct: 358 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 417

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +I    Q GD + A K+F+KM     D V P+ +T++ +++G CK G++E A  +   
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKM---VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 474

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           + K+ ++ ++ TY  +I+G  + G  E+   L   +  +G+ PN ++Y + I     +G 
Sbjct: 475 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 534

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            E A  +  +M +    P+  TY+ L +   R+G    + +L  ++     VGDA + ++
Sbjct: 535 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 594

Query: 435 LINYL 439
           +IN L
Sbjct: 595 VINML 599



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 1/148 (0%)

Query: 512 DASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           D  LD A  L  +  Q   L   + +N L++      K     ++   M+N+ I+ +   
Sbjct: 42  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 101

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YNILIN  C+      A  ++  M+  G  PD VT ++L+  +       E + L D M 
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +    P+  T+N +I  L     A + V
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAV 189


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 254/517 (49%), Gaps = 41/517 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+N+      L + M +     ++ ++N++I   C+  +L  AL++ 
Sbjct: 79  SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII--- 296
            +M+K G  P++V  + ++N  C    +  A+ L  +M VM      PN+VT N +I   
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ---PNTVTFNTLIHGL 195

Query: 297 --------------------------------NGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
                                           NG CK G ++ A  +   M K  I+ +V
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             Y T+ID      +  +AL L  EM  +G+ PN V YNS I  L   G    A  +LSD
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           MI++ I P+  T+S L     + G + +A KL++++++  +  D ++Y+ LIN  C  + 
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  AK +   MI +   P+++TY TLI G+CK   +E  ++++  M +     N V YN+
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I GL +    D A+ + +     G+  D ITY+ L++G    GK+ +A  +F  ++   
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  +   YNI+I  +CK G  +   +L   + L G+ P+ + YTT+++ F +    EE  
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
            L  +M   G  P++ TYN +I   L  G+K+A  ++
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 224/455 (49%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EMV    + ++  FN ++ A+ K  K +  +SL  RM    I  ++  +N++IN  C
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  AL +  KM  +  +   P+ VT + ++NG+C   R+  A  +   M       
Sbjct: 127 RRSQLPLALAVLGKMMKLGYE---PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  T+ TLI G      + EA+ L D MV RG  P+   Y + ++ L   GD++ AL +L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M    I  D   Y+ +   LC    V  A  L  ++  + +  +  +YN LI  LC  
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + A +LLS MI R + P+++T+  LID + K G +  A ++Y+ M K    P++  Y
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363

Query: 503 NSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +S+ING C    LD AK + +    +    + +TYNTLI G+    ++ E   +F EM  
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N V YN LI  L + G    A+++ K M+  G+ PD +TY+ L+    K    E+
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + + + +  S + PD  TYN +I  +      ED
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 233/487 (47%), Gaps = 8/487 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+   I   ++ L+       I     L  +M    Y  N  TFN +I+
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--GVMSG 282
            L    K  EA++L  RM+  G  P++  +  ++N  C+ GD++ AL L +KM  G +  
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           D V+     +  II+  C    V  A  +   M   GI  NV TY +LI      G   +
Sbjct: 254 DVVI-----YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A RL  +M++R + PN V +++ I     EG +  A  +  +MI + I PD FTYS L  
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C +  + +A  +   ++ +    +  +YN LI   CK+  +    +L   M  RGL+ 
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +TY TLI G  + G+ + A ++++ M      P+++ Y+ +++GLCK   L+ A  + 
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  Q+  +  D  TYN +I G    GK+ + + +F  +   G+  N + Y  +I+  C+ 
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  ++A  L + M   G +P+  TY TL+    ++       EL  +M   G   D  T 
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608

Query: 642 NAIISPL 648
           + +I+ L
Sbjct: 609 SMVINML 615



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 210/413 (50%), Gaps = 5/413 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A  +++K++       +  +   +  L     +    
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM + G   NV T+N +I  LC   +  +A  L   M++  I PNVV F+ +I+  
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+  T++ +INGFC   R++ A+ +   MI     
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY TLI G+ +    EE + L  EM +RGL+ N V YN+ I  LF  GD + A  +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC+ G +++A  +   + +  M  D Y+YNI+I  +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P++I Y T+I G+C+ G  E A  ++  MK+    PN   
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +  G + DA T + +IN    +G++ +++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 624



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 174/365 (47%), Gaps = 25/365 (6%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           AL  +T + +N     ++ +  +++  L N+ R+ DA  L+ +++               
Sbjct: 274 ALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER------------- 319

Query: 137 DSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
                 K  P V  F AL+ A  + G    A  +  ++  +     I  +++ ++     
Sbjct: 320 ------KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           + +     +++ M+S     NV T+N +I   CK  ++EE + L+  M + G+  N V +
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +I    Q GD + A K+F+KM     D V P+ +T++ +++G CK G++E A  +   
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKM---VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           + K+ ++ ++ TY  +I+G  + G  E+   L   +  +G+ PN ++Y + I     +G 
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            E A  +  +M +    P+  TY+ L +   R+G    + +L  ++     VGDA + ++
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610

Query: 435 LINYL 439
           +IN L
Sbjct: 611 VINML 615



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 1/148 (0%)

Query: 512 DASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           D  LD A  L  +  Q   L   + +N L++      K     ++   M+N+ I+ +   
Sbjct: 58  DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YNILIN  C+      A  ++  M+  G  PD VT ++L+  +       E + L D M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +    P+  T+N +I  L     A + V
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAV 205


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 236/492 (47%), Gaps = 44/492 (8%)

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S     + + +  L K+  + +      +MVS G+  +V T+  VI+ALC E +L EA  
Sbjct: 8   SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
               M    + PNVV + ++I+  C+ G ++ A+ L  KM        +P +VT+N +I+
Sbjct: 68  FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR----KKCVPTAVTYNSLIS 123

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK  R   A ++   M+ +G   ++ TY TLI G+ +   S++ALR+ +++V RG  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKL 416
           + V Y+  I  L  EG ++ A+ +   MI    C P+  TY+ L  G CR G + +A  L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++ E     D  +Y  L+N  CK   L  A  LL+ M  +GL PD++T+ +L+DG C+
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-------------- 522
              +  AV +   M++    P +  YN+I++G C+   L+ A+  +              
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFN 363

Query: 523 --------------------QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM-RN 561
                               +A +R    D + Y T+I+G     K+ EA  ++ +M   
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   N + Y+ L+  LC  G   +AR  ++     G +P+  TY  L+  F K    E+
Sbjct: 424 PGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDED 479

Query: 622 VIELHDDMVLSG 633
             EL DDMV  G
Sbjct: 480 ARELLDDMVQRG 491



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 236/500 (47%), Gaps = 70/500 (14%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNL----MSANSVSPLEFLEGLLDSYEI---- 141
           F   + +  A++H L    R  +A   +  +    ++ N V+    ++GL     +    
Sbjct: 42  FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101

Query: 142 ---------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
                    C  T   +++L+    +      AYD+++++   G    I  +   ++   
Sbjct: 102 ALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFC 161

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNV 251
           K  +     ++++++V+ G+  +V T++ +I  LCKE +L+EA+ L+ RM+KSG   PN 
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNT 221

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           V +N +I+  C++G ++ A+ L  +M   +G S  P+ VT+  ++NGFCKL R++ A ++
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMA-ETGSS--PDVVTYTTLMNGFCKLARLDDAYDL 278

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M + G+  +V T+ +L+DG  R     +A+ +  EM ++   P              
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT------------- 325

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE-HMVGDAY 430
                                  +TY+ +  G CR   +++A K    +LEE     +  
Sbjct: 326 ----------------------VYTYNTILDGYCRANQLEEARKF---MLEEMDCPPNVV 360

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           S+NI+I  LCK N  + A +L+     R   PD++ Y T+IDG C+   ++ A +VY  M
Sbjct: 361 SFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420

Query: 491 KKVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFIN 546
             +E+    PN + Y++++ GLC    LD A+  ++     G +  I TYN LI+ +   
Sbjct: 421 --LEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKA 474

Query: 547 GKIAEAFAMFSEMRNVGIAV 566
            +  +A  +  +M   G  V
Sbjct: 475 NRDEDARELLDDMVQRGFGV 494



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 189/413 (45%), Gaps = 36/413 (8%)

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +++ +S   + VT+  +I G CK+ R+E A      M+  G   +V TY  +I       
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              EA +  +EM  R L PN V Y   I  L   G V+ A+ +LS M  K + P   TY+
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC+     +A+ L  +++    + D ++Y  LI   CKS     A ++   ++ R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNLVIYNSIINGLCKDASLDA 517
           G  PD++TY  LIDG CK G ++ A+ ++  M K     PN V YNS+I+G C+   +D 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 518 AKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A +LL+     G   D +TY TL+NG+    ++ +A+ + ++M   G+  + V +  L++
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK---------------NCSP-- 619
            LC+      A  ++  M      P   TY T++  + +               +C P  
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNV 359

Query: 620 ----------------EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                            E +EL ++      +PD   Y  +I  L  EK  ++
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V Y S I  L     +E AL  L  M+ K   PD +TY+ +   LC    + +A K   +
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +   ++  +  +Y +LI+ LCK   +  A  LLS M  +  +P  +TY +LI G CK   
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNT 538
              A  + E M      P++  Y ++I G CK   S DA +   Q   R    D +TY+ 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAV-NKVGYNILINFLCKFGCYQQARELMKVMILH 597
           LI+G    G++ EA  +F  M   G  + N V YN LI+  C+ G   +A  L++ M   
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G  PD VTYTTL+  F K    ++  +L + M   G++PD  T+ +++  L  E    D 
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 658 V 658
           V
Sbjct: 311 V 311



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 2/197 (1%)

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D +TY +LI G CK   +E A+     M      P++  Y ++I+ LC +  L  A+  L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +      L  + +TY  LI+G    G++ EA A+ S+MR   +    V YN LI+ LCK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKA 128

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
               +A +L++ M+  G IPD  TYTTL+T F K+   ++ + + + +V  G  PD  TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 642 NAIISPLLGEKSAEDQV 658
           + +I  L  E   ++ +
Sbjct: 189 SCLIDGLCKEGRLKEAI 205


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 242/501 (48%), Gaps = 39/501 (7%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  L+ + K         L ++M S G   +V T  +VI +LC   +++ A S   ++L
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P+   F  +I   C  G +  AL LF KM    G+   PN VT+  +ING CK+G
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM---IGEGFQPNVVTYGTLINGLCKVG 189

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
               A  +  +M +     NV  ++TLID   +     EA  +  EM+ +G+ PN V YN
Sbjct: 190 NTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYN 249

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S IH L    + +    ++++M+D  I PD FT + +   LC+ G V +A  + + ++  
Sbjct: 250 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +  +YN L++  C  N +  A ++  +M+ +  + ++I+Y TLI+GYCK  +++ A
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA------------------- 524
           + ++E M + E  PN V YN++I+GLC    L  A SL                      
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429

Query: 525 -------SQRIGLLDAI----------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
                   + + LL AI           Y T+++G    G++ +A  +FS + + G+  N
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              YNI+I+ LCK G   +A +L   M  +G  P+  TY  +   F +N      IEL +
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 549

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           +M+  G S D  T   ++  L
Sbjct: 550 EMLARGFSVDVSTTTLLVGML 570



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 236/467 (50%), Gaps = 4/467 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           + N F S  +  N +      +  M+      +   FN ++ ++ K       LSL  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              GI P+V    ++IN  C +  ++FA     K+  +      P++ T   +I G C  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ---PDATTFTTLIRGLCVE 153

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G++  A  +   MI  G   NV TY TLI+G  + G++  A+RL   M +    PN VV+
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           ++ I  L  +  V  A  + S+MI K I P+  TY+ L  GLC+    K    L N++++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ D ++ N +++ LCK   +A A  ++  MI RG+ P+++TY  L+DG+C    ++ 
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           AV+V++ M   +   N++ YN++ING CK  S+D A  L +   R  L  + +TYNTLI+
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    G++ +A ++F EM   G   + V Y  L ++LCK     +A  L+K +      P
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D   YTT++    +    E+  +L  ++   G+ P+  TYN +I  L
Sbjct: 454 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 500



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 241/504 (47%), Gaps = 9/504 (1%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLK 173
           L+ ++      S L  L   +DS+ I    P V+    ++ +   +   + A+  + K+ 
Sbjct: 76  LLTSIAKTKHHSTLLSLSRQMDSFGI---PPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
             GH      +   +  L    +IG    L+ +M+  G+  NV T+  +I  LCK     
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            A+ L   M +    PNVV F+ +I+  C+   +  A  +F +M +  G S  PN VT+N
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM-ITKGIS--PNIVTYN 249

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I+G CKL   +    +   M+ + I  +V T  T++D   + G   EA  + D M+ R
Sbjct: 250 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ PN V YN+ +       +V+ A+ V   M+ K    +  +Y+ L  G C+   V +A
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L  ++  + +  +  +YN LI+ LC    L  A  L   M+ RG IPD++TY TL D 
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
            CK  +++ A+ + + ++     P++ IY +I++G+C+   L+ A+ L       GL   
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 534 I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + TYN +I+G    G +AEA  +FSEM   G + N   YN++     +     +  EL++
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 549

Query: 593 VMILHGIIPDYVTYTTLVTRFSKN 616
            M+  G   D  T T LV   S +
Sbjct: 550 EMLARGFSVDVSTTTLLVGMLSDD 573



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 206/426 (48%), Gaps = 4/426 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L+EALS + RML     P+ V FN ++    +       L L R+M       + P+  T
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFG---IPPDVYT 107

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              +IN  C L RV+FA      ++K G   +  T+ TLI G    G   EAL L D+M+
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G  PN V Y + I+ L   G+   A+ +L  M   +  P+   +S L   LC++  V 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF + ++++ + +  +  +YN LI+ LCK         L++ M+   ++PD+ T  T++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGL 530
           D  CK G +  A  V + M     +PN+V YN++++G C    +D A  +      +  +
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + I+YNTLINGY     + +A  +F EM    +  N V YN LI+ LC  G  Q A  L
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              M+  G IPD VTY TL     KN   ++ + L   +  S   PD Q Y  I+  +  
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467

Query: 651 EKSAED 656
               ED
Sbjct: 468 AGELED 473



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 224/453 (49%), Gaps = 5/453 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F  L+R     G    A  +  K+  +G   ++  +   ++ L K+       +L + 
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       NV  F+ +I +LCK+ ++ EA +++  M+  GI PN+V +N +I+  C++ +
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L   M  M    ++P+  T N +++  CK G V  A ++   MI  G++ NV T
Sbjct: 261 WKHVTTL---MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      + A+++ D MV +  + N + YN+ I+       V+ A+++  +M 
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 377

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + + P+  TY+ L  GLC  G ++ A  L ++++    + D  +Y  L +YLCK+ +L 
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL ++      PDI  Y T++DG C+ G +E A  ++ N+     +PN+  YN +I
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK   L  A  L     + G   +  TYN +  G+  N +      +  EM   G +
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557

Query: 566 VNKVGYNILINFLCKFGCYQQARELM-KVMILH 597
           V+     +L+  L   G  Q  ++++ K++IL+
Sbjct: 558 VDVSTTTLLVGMLSDDGLDQSVKQILCKIVILY 590



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 1/333 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L+   A+       L L  +M   G+ P+       I+ L     V+ A   L+ ++
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                PD  T++ L +GLC  G + +A  L ++++ E    +  +Y  LIN LCK  N +
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           AA +LL SM      P+++ + TLID  CK   +  A  ++  M      PN+V YNS+I
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK        +L+       ++ D  T NT+++     G +AEA  +   M + G+ 
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V YN L++  C       A ++   M+    + + ++Y TL+  + K  S ++ + L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            ++M    ++P+  TYN +I  L      +D +
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 163/383 (42%), Gaps = 67/383 (17%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+    VF  L+ +  +      A+++  ++  KG S +I  +N+ +  L KL E     
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EMV    + +V T N V+ ALCKE  + EA  +   M+  G+ PNVV +N +++  
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 262 CQVGDLEFALKLFRKM--------------------------------GVMSGDSVLPNS 289
           C   +++ A+K+F  M                                  MS   + PN+
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGI----------------------------- 320
           VT+N +I+G C +GR++ A  + + M+  G                              
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 321 ------DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
                 D +++ Y T++DG  R G  E+A  L   +  +GL PN   YN  IH L  +G 
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  + S+M      P+  TY+++T+G  RN    +  +L  ++L      D  +  +
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 435 LINYLCKSNNLAAAKQLLSSMIV 457
           L+  L       + KQ+L  +++
Sbjct: 566 LVGMLSDDGLDQSVKQILCKIVI 588


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 235/471 (49%), Gaps = 4/471 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +   L+ +  +        L K+M S G   +V T  +VI + C   +++   S+ 
Sbjct: 73  SVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVL 132

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            ++ K G  P+   F  +I   C  G +  AL LF KM    G+   PN VT+  +I+G 
Sbjct: 133 AKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM---VGEGFQPNGVTYGTLIHGL 189

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A  +  +M++   + NV TY T+ID   +     EAL +  EM+ +G+ PN 
Sbjct: 190 CKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNV 249

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS IH L    + +    ++++M+D  I P+   ++ L   LC+ G V  A  + + 
Sbjct: 250 STYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDV 309

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +++  +  D  +Y  L++  C  + +  A ++  +M+ +G  P++I+Y TLI+GYCK   
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQR 369

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           I+ A+ ++E M + E  PN+V YN++I+GLC    L  A +L       G + D +TY  
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++       + +A AM   +    +A +   YNI+I+ +C+ G  + A +L   +   G
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + PD  TYT ++          E  +L  +M   G SPD+ TYN I    L
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFL 540



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/456 (31%), Positives = 230/456 (50%), Gaps = 4/456 (0%)

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           LN +   + +  ++   G+  +  TF  +I  LC E K+ EAL L+ +M+  G  PN V 
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +I+  C+VG+   A++L R M   + +   PN +T+N II+   K  +V  A  I  
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCE---PNVITYNTIIDCLFKDRQVNEALNIFS 238

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            MI  GI  NV TY ++I G  +    +    L +EMV   +MPN V++ + +  L  EG
Sbjct: 239 EMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEG 298

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            V  A  V+  MI + + PD  TY+ L  G C    + +A K+ + ++ +    +  SY+
Sbjct: 299 MVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYS 358

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LIN  CK   +  A  L   M  R L+P+I+TY TLI G C  G +  A+ ++  M   
Sbjct: 359 TLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVAS 418

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
            + P+LV Y  +++ LCK   LD A ++L+A +   L  D  +YN +I+G    G++  A
Sbjct: 419 GQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAA 478

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +FS + + G+  +   Y I+IN LC  G   +A +L + M   G  PD  TY  +   
Sbjct: 479 GDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRG 538

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           F +N      I+L  +M+  G S D  T   I+  L
Sbjct: 539 FLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 227/456 (49%), Gaps = 4/456 (0%)

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
            N I      +  M+      +V  F  ++ ++         LSL  +M   GI  +V  
Sbjct: 52  FNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYT 111

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
             ++IN  C +  ++F   +  K+  +      P++ T   +I G C  G++  A  +  
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQ---PDTATFTTLIRGLCVEGKIGEALHLFD 168

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M+  G   N  TY TLI G  + G+S  A+RL   MV++   PN + YN+ I  LF + 
Sbjct: 169 KMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDR 228

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            V  AL + S+MI K I P+  TY+ +  GLC+    K    L N++++  ++ +   + 
Sbjct: 229 QVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFT 288

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            L++ LCK   +  A  ++  MI RG+ PD++TY  L+DG+C    ++ A +V++ M + 
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEA 552
              PN++ Y+++ING CK   +D A  L +   QR  + + +TYNTLI+G    G++ +A
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            A+F EM   G   + V Y IL+++LCK     QA  ++K +    + PD  +Y  ++  
Sbjct: 409 IALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDG 468

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +    E   +L   +   G+ PD  TY  +I+ L
Sbjct: 469 MCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 218/446 (48%), Gaps = 4/446 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  L+R     G    A  +  K+  +G   +   +   +  L K+       +L + 
Sbjct: 145 ATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRS 204

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV      NV T+N +I  L K+ ++ EAL+++  M+  GI PNV  +N II+  C+  +
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L   M  M    ++PN V    +++  CK G V  A ++   MI+ G++ +V T
Sbjct: 265 WKHVATL---MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVT 321

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      +EA ++ D MV++G  PN + Y++ I+       ++ A+++  +M 
Sbjct: 322 YTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMC 381

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + + P+  TY+ L  GLC  G ++ A  L ++++    + D  +Y IL++YLCK+ +L 
Sbjct: 382 QRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLD 441

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +L ++    L PDI +Y  +IDG C+ G +E A  ++ ++      P++  Y  +I
Sbjct: 442 QAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMI 501

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLC    L  A  L +     G   D  TYN +  G+  N +   A  +  EM   G +
Sbjct: 502 NGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFS 561

Query: 566 VNKVGYNILINFLCKFGCYQQARELM 591
            +     +++  L   G  Q  ++++
Sbjct: 562 ADASTITLIVEMLSDDGLDQSVKQIL 587



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 218/427 (51%), Gaps = 8/427 (1%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV- 290
           ++EALS + RML     P+VV F  I+     +      L L ++M  +     +P+ V 
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLG----IPSDVY 110

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T   +IN FC L RV+F   +   + K G   +  T+ TLI G    G   EAL L D+M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V  G  PN V Y + IH L   G+   A+ +L  M+ K+  P+  TY+ +   L ++  V
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  + ++++ + +  +  +YN +I+ LCK +       L++ M+   ++P+++ + TL
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +D  CK G +  A  V + M +   +P++V Y ++++G C  + +D A  +     R G 
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             + I+Y+TLINGY    +I +A  +F EM    +  N V YN LI+ LC  G  + A  
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL- 648
           L   M+  G IPD VTY  L+    K    ++ + +   +  S ++PD Q+YN +I  + 
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470

Query: 649 -LGEKSA 654
            +GE  A
Sbjct: 471 RVGELEA 477



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 226/469 (48%), Gaps = 8/469 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            + V+ K+   GH      +   +  L    +IG    L+ +MV  G+  N  T+  +I+
Sbjct: 128 GFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIH 187

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK      A+ L   M++    PNV+ +N II+   +   +  AL +F +M +  G S
Sbjct: 188 GLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEM-IAKGIS 246

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             PN  T+N II+G CK    +    +   M+ + I  NV  + TL+D   + G    A 
Sbjct: 247 --PNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAH 304

Query: 345 RLCDEMVKRGLMPNNVVYNSTI--HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
            + D M++RG+ P+ V Y + +  H L +E D    +F    M+ K   P+  +YS L  
Sbjct: 305 DVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVF--DTMVRKGCAPNVISYSTLIN 362

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+   + +A  L  ++ +  +V +  +YN LI+ LC    L  A  L   M+  G IP
Sbjct: 363 GYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIP 422

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D++TY  L+D  CK  +++ A+ + + ++     P++  YN +I+G+C+   L+AA  L 
Sbjct: 423 DLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
            +    GL  D  TY  +ING  + G +AEA  +F EM   G + +   YN++     + 
Sbjct: 483 SSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRN 542

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
                A +L++ M+  G   D  T T +V   S +   + V ++  + V
Sbjct: 543 NETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 184/376 (48%), Gaps = 5/376 (1%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           L+ G     NS + +  L  ++     C+     ++ ++    +      A ++  ++  
Sbjct: 185 LIHGLCKVGNSRAAIRLLRSMVQKN--CEPNVITYNTIIDCLFKDRQVNEALNIFSEMIA 242

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG S ++  +N+ +  L K +E      L  EMV    + NV  F  ++ ALCKE  +  
Sbjct: 243 KGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTI 302

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  +   M++ G+ P+VV +  +++  C   +++ A K+F  M V  G    PN ++++ 
Sbjct: 303 AHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM-VRKG--CAPNVISYST 359

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +ING+CK+ R++ A  +   M +  +  N+ TY TLI G    G   +A+ L  EMV  G
Sbjct: 360 LINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASG 419

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
            +P+ V Y   + +L     ++ A+ +L  +   ++ PD  +Y+I+  G+CR G ++ A 
Sbjct: 420 QIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAG 479

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L + +  + +  D ++Y I+IN LC    LA A +L   M   G  PD  TY  +  G+
Sbjct: 480 DLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGF 539

Query: 475 CKGGNIEGAVQVYENM 490
            +      A+Q+ + M
Sbjct: 540 LRNNETLSAIQLLQEM 555



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 3/309 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  LV A  + G    A+DV+  +  +G    +  +   +      +E+    K++  M
Sbjct: 286 IFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM 345

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   NV +++ +I   CK  ++++A+ L+  M +  + PN+V +N +I+  C VG L
Sbjct: 346 VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A+ LF +M V SG   +P+ VT+  +++  CK   ++ A  +  A+  + +  ++++Y
Sbjct: 406 RDAIALFHEM-VASGQ--IPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +IDG  R G  E A  L   +  +GL P+   Y   I+ L  +G +  A  +  +M  
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  TY+++T+G  RN     A +L  ++L      DA +  +++  L       +
Sbjct: 523 DGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQS 582

Query: 448 AKQLLSSMI 456
            KQ+L   +
Sbjct: 583 VKQILHEFV 591



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 3/205 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+     +G    A  +  ++   G    +  +   L +L K   + +   + K +
Sbjct: 391 TYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI 450

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  ++ ++N+VI  +C+  +LE A  L+  +   G+ P+V  + ++IN  C  G L
Sbjct: 451 EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLL 510

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KLFR+M     D   P+  T+N I  GF +      A ++   M+  G   +  T 
Sbjct: 511 AEATKLFREMNT---DGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTI 567

Query: 328 ATLIDGYARGGSSEEALRLCDEMVK 352
             +++  +  G  +   ++  E V+
Sbjct: 568 TLIVEMLSDDGLDQSVKQILHEFVQ 592



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 1/179 (0%)

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
            I+ A+  +  M  ++  P++V +  I+  +          SL +    +G+  D  T  
Sbjct: 54  TIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLA 113

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            +IN +    ++   F++ +++  +G   +   +  LI  LC  G   +A  L   M+  
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           G  P+ VTY TL+    K  +    I L   MV     P+  TYN II  L  ++   +
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 242/501 (48%), Gaps = 39/501 (7%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  L+ + K         L ++M S G   +V T  +VI +LC   +++ A S   ++L
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P+   F  +I   C  G +  AL LF KM    G+   PN VT+  +ING CK+G
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM---IGEGFQPNVVTYGTLINGLCKVG 189

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
               A  +  +M +     NV  ++TLID   +     EA  +  EM+ +G+ PN V YN
Sbjct: 190 NTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYN 249

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S IH L    + +    ++++M+D  I PD FT + +   LC+ G V +A  + + ++  
Sbjct: 250 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +  +YN L++  C  N +  A ++  +M+ +  + ++I+Y TLI+GYCK  +++ A
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA------------------- 524
           + ++E M + E  PN V YN++I+GLC    L  A SL                      
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429

Query: 525 -------SQRIGLLDAI----------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
                   + + LL AI           Y T+++G    G++ +A  +FS + + G+  N
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              YNI+I+ LCK G   +A +L   M  +G  P+  TY  +   F +N      IEL +
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 549

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           +M+  G S D  T   ++  L
Sbjct: 550 EMLARGFSVDVSTTTLLVGML 570



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 236/467 (50%), Gaps = 4/467 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           + N F S  +  N +      +  M+      +   FN ++ ++ K       LSL  +M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              GI P+V    ++IN  C +  ++FA     K+  +      P++ T   +I G C  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQ---PDATTFTTLIRGLCVE 153

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G++  A  +   MI  G   NV TY TLI+G  + G++  A+RL   M +    PN VV+
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           ++ I  L  +  V  A  + S+MI K I P+  TY+ L  GLC+    K    L N++++
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ D ++ N +++ LCK   +A A  ++  MI RG+ P+++TY  L+DG+C    ++ 
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           AV+V++ M   +   N++ YN++ING CK  S+D A  L +   R  L  + +TYNTLI+
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    G++ +A ++F EM   G   + V Y  L ++LCK     +A  L+K +      P
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D   YTT++    +    E+  +L  ++   G+ P+  TYN +I  L
Sbjct: 454 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 500



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 241/504 (47%), Gaps = 9/504 (1%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLK 173
           L+ ++      S L  L   +DS+ I    P V+    ++ +   +   + A+  + K+ 
Sbjct: 76  LLTSIAKTKHHSTLLSLSRQMDSFGI---PPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
             GH      +   +  L    +IG    L+ +M+  G+  NV T+  +I  LCK     
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            A+ L   M +    PNVV F+ +I+  C+   +  A  +F +M +  G S  PN VT+N
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM-ITKGIS--PNIVTYN 249

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I+G CKL   +    +   M+ + I  +V T  T++D   + G   EA  + D M+ R
Sbjct: 250 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ PN V YN+ +       +V+ A+ V   M+ K    +  +Y+ L  G C+   V +A
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L  ++  + +  +  +YN LI+ LC    L  A  L   M+ RG IPD++TY TL D 
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
            CK  +++ A+ + + ++     P++ IY +I++G+C+   L+ A+ L       GL   
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489

Query: 534 I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + TYN +I+G    G +AEA  +FSEM   G + N   YN++     +     +  EL++
Sbjct: 490 VWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLE 549

Query: 593 VMILHGIIPDYVTYTTLVTRFSKN 616
            M+  G   D  T T LV   S +
Sbjct: 550 EMLARGFSVDVSTTTLLVGMLSDD 573



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 206/426 (48%), Gaps = 4/426 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L+EALS + RML     P+ V FN ++    +       L L R+M       + P+  T
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFG---IPPDVYT 107

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              +IN  C L RV+FA      ++K G   +  T+ TLI G    G   EAL L D+M+
Sbjct: 108 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G  PN V Y + I+ L   G+   A+ +L  M   +  P+   +S L   LC++  V 
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF + ++++ + +  +  +YN LI+ LCK         L++ M+   ++PD+ T  T++
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 287

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGL 530
           D  CK G +  A  V + M     +PN+V YN++++G C    +D A  +      +  +
Sbjct: 288 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 347

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + I+YNTLINGY     + +A  +F EM    +  N V YN LI+ LC  G  Q A  L
Sbjct: 348 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 407

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              M+  G IPD VTY TL     KN   ++ + L   +  S   PD Q Y  I+  +  
Sbjct: 408 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 467

Query: 651 EKSAED 656
               ED
Sbjct: 468 AGELED 473



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 218/446 (48%), Gaps = 4/446 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F  L+R     G    A  +  K+  +G   ++  +   ++ L K+       +L + 
Sbjct: 141 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS 200

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       NV  F+ +I +LCK+ ++ EA +++  M+  GI PN+V +N +I+  C++ +
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L   M  M    ++P+  T N +++  CK G V  A ++   MI  G++ NV T
Sbjct: 261 WKHVTTL---MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      + A+++ D MV +  + N + YN+ I+       V+ A+++  +M 
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 377

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + + P+  TY+ L  GLC  G ++ A  L ++++    + D  +Y  L +YLCK+ +L 
Sbjct: 378 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL ++      PDI  Y T++DG C+ G +E A  ++ N+     +PN+  YN +I
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK   L  A  L     + G   +  TYN +  G+  N +      +  EM   G +
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557

Query: 566 VNKVGYNILINFLCKFGCYQQARELM 591
           V+     +L+  L   G  Q  ++++
Sbjct: 558 VDVSTTTLLVGMLSDDGLDQSVKQIL 583



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 1/333 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L+   A+       L L  +M   G+ P+       I+ L     V+ A   L+ ++
Sbjct: 73  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                PD  T++ L +GLC  G + +A  L ++++ E    +  +Y  LIN LCK  N +
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           AA +LL SM      P+++ + TLID  CK   +  A  ++  M      PN+V YNS+I
Sbjct: 193 AAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI 252

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK        +L+       ++ D  T NT+++     G +AEA  +   M + G+ 
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V YN L++  C       A ++   M+    + + ++Y TL+  + K  S ++ + L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            ++M    ++P+  TYN +I  L      +D +
Sbjct: 373 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 160/378 (42%), Gaps = 67/378 (17%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+    VF  L+ +  +      A+++  ++  KG S +I  +N+ +  L KL E     
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EMV    + +V T N V+ ALCKE  + EA  +   M+  G+ PNVV +N +++  
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 262 CQVGDLEFALKLFRKM--------------------------------GVMSGDSVLPNS 289
           C   +++ A+K+F  M                                  MS   + PN+
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGI----------------------------- 320
           VT+N +I+G C +GR++ A  + + M+  G                              
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 321 ------DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
                 D +++ Y T++DG  R G  E+A  L   +  +GL PN   YN  IH L  +G 
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  + S+M      P+  TY+++T+G  RN    +  +L  ++L      D  +  +
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 435 LINYLCKSNNLAAAKQLL 452
           L+  L       + KQ+L
Sbjct: 566 LVGMLSDDGLDQSVKQIL 583


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 163/608 (26%), Positives = 282/608 (46%), Gaps = 67/608 (11%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPK---LALEFYTWVGENNRFSHSLESSCAIVHLLVNW 107
           LE   P L+ S+V  ++    K+P    L   F+ W  +  R   S  S   I+ +L+  
Sbjct: 50  LESKVPFLSPSIVTYII----KNPPNSLLGFRFFIWASKFRRL-RSWVSHNMIIDMLIKD 104

Query: 108 RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEIC--KATPAVFDALVRACTQIGATEGA 165
             F                   E    +L   + C    +   F  L++A  ++   E A
Sbjct: 105 NGF-------------------ELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKA 145

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
            +  + +K       +  +N  L  +V+   +     +Y  M+    + N+ TF+++I  
Sbjct: 146 VESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDG 205

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           +CK  K + AL ++  M +  I PN + + +II+  CQ    + A +LF     M     
Sbjct: 206 MCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFI---AMKDHGC 262

Query: 286 LPNSVTHNCIINGFCKLGRVEFA-------EEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +P+SVT+N +++GFCKLGRV+ A       E+ RY + K G  C       LIDG  R  
Sbjct: 263 IPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSC-------LIDGLFRAR 315

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E+A     +M +  + P+ ++Y   +  L   G  + AL +L++M ++ + PD   Y+
Sbjct: 316 RFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYN 375

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L KG C  G + +A  LH ++ +      A +Y ILI  +C+S  +  A+Q+ + M   
Sbjct: 376 ALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKH 435

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P ++T+  LIDG+CK GNIE A  ++  M ++ + P+L +                 
Sbjct: 436 GCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFL----------------- 477

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             L Q + R+  LD  +  T++     +G I +A+ +  ++ + G A N + YNILI+  
Sbjct: 478 -RLSQGANRV--LDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGF 534

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G    A +L K + L G+ PD VTY TL+         E+   + D ++ +G +P  
Sbjct: 535 CKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPIT 594

Query: 639 QTYNAIIS 646
           + Y + ++
Sbjct: 595 EVYKSFMT 602



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 20/493 (4%)

Query: 181 IHAW---NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           + +W   N  +  L+K N    +W++ KE+  CG+  + + F ++I A  K   +E+A+ 
Sbjct: 88  LRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVE 147

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
            +  M      P+V  +N +++   +   +  AL ++ +M  ++    LPN  T + +I+
Sbjct: 148 SFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN---CLPNIATFSILID 204

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK G+ + A ++   M +  I  N  TY  +I G  +   ++ A RL   M   G +P
Sbjct: 205 GMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIP 264

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           ++V YN+ +H     G V+ AL +L          D   YS L  GL R    + A   +
Sbjct: 265 DSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWY 324

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++ E ++  D   Y I++  L K+     A +LL+ M  RGL+PD   Y  LI GYC  
Sbjct: 325 RKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDL 384

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TY 536
           G ++ A  ++  + K +   +   Y  +I G+C+   +  A+ +    ++ G   ++ T+
Sbjct: 385 GLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTF 444

Query: 537 NTLINGYFINGKIAEAFAMFSEM---RNVGI----------AVNKVGYNILINFLCKFGC 583
           N LI+G+   G I +A  +F +M   RN  +           ++      ++  LC  G 
Sbjct: 445 NALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGL 504

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A  ++  +   G  P+ +TY  L+  F K  +     +L  ++ L G+SPD+ TY  
Sbjct: 505 ILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGT 564

Query: 644 IISPLLGEKSAED 656
           +I+ LL     ED
Sbjct: 565 LINGLLSANREED 577



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 213/484 (44%), Gaps = 22/484 (4%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  ++    Q    + AY +   +K  G       +N  L    KL  +     L K  
Sbjct: 233 TYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYF 292

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
               YV +   ++ +I  L +  + E+A   Y +M +  I P+V+ + +++    + G  
Sbjct: 293 EKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKF 352

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL+L  +M   +   ++P++  +N +I G+C LG ++ A+ +   + K     +  TY
Sbjct: 353 KDALRLLNEM---TERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTY 409

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM-I 386
             LI G  R G   +A ++ +EM K G  P+ V +N+ I      G++E A  +   M I
Sbjct: 410 TILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEI 469

Query: 387 DKHICPDHF--------------TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            ++  P  F              +   + + LC +G + +A+ +  Q+ +     +  +Y
Sbjct: 470 GRN--PSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITY 527

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NILI+  CK+ N+  A +L   + ++GL PD +TYGTLI+G       E A  V + + K
Sbjct: 528 NILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILK 587

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAE 551
               P   +Y S +   C+   +  A SL L+  + I   D+    + +   F  G++ E
Sbjct: 588 NGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKS-VEENFEKGEVEE 646

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A     EM           Y I +  LC+ G  ++A ++   +  H ++    +   L+ 
Sbjct: 647 AVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIY 706

Query: 612 RFSK 615
           R  K
Sbjct: 707 RLLK 710



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 99/464 (21%), Positives = 180/464 (38%), Gaps = 106/464 (22%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           E +R+    +    ++  L   RRF+DA +    +   N                  K  
Sbjct: 293 EKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN-----------------IKPD 335

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             ++  +++  ++ G  + A  ++ ++  +G     H +N  +     L  +     L+ 
Sbjct: 336 VILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHL 395

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E+       +  T+ ++I  +C+   + +A  ++  M K G +P+VV FN +I+  C+ G
Sbjct: 396 EISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAG 455

Query: 266 DLEFALKLFRKMGVMSGDSVL--------------------------------------- 286
           ++E A  LF KM +    S+                                        
Sbjct: 456 NIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQL 515

Query: 287 ------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
                 PN +T+N +I+GFCK G +  A ++   +   G+  +  TY TLI+G       
Sbjct: 516 TDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANRE 575

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWL------------------------------- 369
           E+A  + D+++K G  P   VY S + W                                
Sbjct: 576 EDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSV 635

Query: 370 ---FAEGDVEGALFVLSDMI----DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
              F +G+VE A+  L +M     D  + P    Y+I   GLC+ G +++A K+   + E
Sbjct: 636 EENFEKGEVEEAVRGLLEMDFKLNDFQLAP----YTIWLIGLCQAGRLEEALKIFFTLEE 691

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG--LIPDI 464
            +++    S   LI  L K  NL  A ++    I +G  L+P I
Sbjct: 692 HNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRI 735



 Score = 42.4 bits (98), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 60/295 (20%), Positives = 111/295 (37%), Gaps = 41/295 (13%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A    +V      G    AY+++ +L   G + +I  +N  +    K   I   +KL+KE
Sbjct: 490 ASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKE 549

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +   G   +  T+  +I  L    + E+A ++  ++LK+G  P    +   +  +C+   
Sbjct: 550 LQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNK 609

Query: 267 LEFALKLFRK--MGVMSGDSVLPNSVTHN-----------------------------CI 295
           +  A  L+ K    +   DS +  SV  N                               
Sbjct: 610 ITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIW 669

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           + G C+ GR+E A +I + + +  +     +   LI    + G+ + A  +    + +G 
Sbjct: 670 LIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGY 729

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALF-VLSDM------IDKHICPDHFTYSILTKG 403
           M    + N  +  L    D     F +LS M      +D H+   H T   L +G
Sbjct: 730 MLMPRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGYDLDSHL---HQTTKFLLQG 781


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 180/673 (26%), Positives = 296/673 (43%), Gaps = 47/673 (6%)

Query: 17  SRAFHVGKQFANPSTEDIVFRAICVN----------LRQRKWK---ILEQMAPSLTNSLV 63
           +R+F  GK      T D V RA  V           L    W    I   + P     L 
Sbjct: 27  ARSFPSGKPEREHLTPDFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLG 86

Query: 64  NRVVSEFR--KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
           + V +  R  K    A+ F+ W GE   F H + +   +++LLV  + +     +   ++
Sbjct: 87  SHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEML 146

Query: 122 SANSVSPLEF--------------LEGLLDSYEI-----CKATPAVFDALVRACTQIGAT 162
            A  ++P  F               +  +  +EI     CK     F  LV    + G  
Sbjct: 147 KAG-IAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD 205

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNN-FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
           E A++V  ++   G      A +   +  L+K   +    +++ +M  CG+  +   +N 
Sbjct: 206 EKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNT 265

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I  L K    +EAL +   ML     P  V + +++N  C+ G LE A +LFR   VM+
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR---VMA 322

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
                PNSV +  +I+GF K GR++ A  +   M++AG   +V T+  +IDG  + G+ E
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +A +  +EM++ G  PN V Y + I  L   G V  A  ++  MI     PD  TY  L 
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL---SSMIVR 458
            G C+ G + +A +L +++ +     +   Y+ L+  LC   ++      L   S     
Sbjct: 443 DGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAE 502

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK--DASLD 516
            L P +    ++I G CK G ++ A ++++ M     KP+   YN +INGLC+  +  ++
Sbjct: 503 NLDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A +LL   + +G L DA+TY  L  G    G++  A  M  E  + G   + V Y  L 
Sbjct: 561 RAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
             LC  G   +A  L + M+  G  PD   Y  ++    K    E+  +  D+M+  G  
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK 680

Query: 636 PDNQTYNAIISPL 648
           P   TY A++  L
Sbjct: 681 PTVATYTALVQAL 693



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 245/553 (44%), Gaps = 49/553 (8%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           ++ G   + ++   L+ L+ +L   + C  T   +  LV +  + G  E A ++ + +  
Sbjct: 266 MIDGLAKAGHAQEALKVLDNML--AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G   +   + + +    K   +     L+ EMV  GY  +V T  ++I  LCK    E+
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A   +  M++ G  PNVV +  II    ++G +  A   FR M  M      P+SVT+ C
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA---FRIMKGMIAHGCFPDSVTYIC 440

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE------------- 341
           +++GFCKLGR++ A ++   + K     N++ Y++L+ G   GGS E             
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500

Query: 342 -----------------------EALRLCDEMVKRGLMPNNVVYNSTIHWL--FAEGDVE 376
                                  EA R+   MV  G  P+   YN  I+ L    E  VE
Sbjct: 501 AENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +L D+      PD  TY+ L  GLC+ G V +A K+  +        D  +Y  L 
Sbjct: 561 RAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALC 620

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LC    +  A  L   M+ +G  PD   Y  +I+G  KG  +E A + ++ M    +K
Sbjct: 621 TGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQK 680

Query: 497 PNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEA 552
           P +  Y +++  LC   ++D A    + +L   + +G    + Y+ LI+G+    K+  A
Sbjct: 681 PTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVG--SVMIYDALIHGFCKALKVDAA 738

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F +M + G     V    L + L + G  ++A+EL++ M   G  P   T+T ++  
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798

Query: 613 FSKNCSPEEVIEL 625
             K+    ++++L
Sbjct: 799 LRKSDESGKLLKL 811



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 187/391 (47%), Gaps = 4/391 (1%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+  FR  G  +G     +  T+NC++N             I   M+KAGI  N  ++  
Sbjct: 102 AISFFRWAGEQAG--FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNI 159

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID-K 388
           LI  +AR   +++A+   + M ++   P+   +   +  L   G  E A  V  +M+   
Sbjct: 160 LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMG 219

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD   ++ + + L +   VK+A ++  Q+ +     DA +YN +I+ L K+ +   A
Sbjct: 220 FVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEA 279

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            ++L +M+ +  +P  +TYG L++  CK G +E A +++  M     +PN VIY S+I+G
Sbjct: 280 LKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHG 339

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
             K   +  A SL       G   D IT+  +I+G   +G   +A   F EM   G   N
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y  +I  L K G    A  +MK MI HG  PD VTY  L+  F K    +E  +L D
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           ++     SP+ Q Y++++  L    S E+ +
Sbjct: 460 ELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 185/424 (43%), Gaps = 45/424 (10%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  +++  ++IG    A+ +++ +   G       +   L    KL  +    
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 202 KLYKEMVSC-------------------GYVENV--NTF--------NL-------VIYA 225
           +L  E+  C                   G VEN   + F        NL       +I  
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVG 515

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD--LEFALKLFRKMGVMSGD 283
           LCK  +L+EA  ++ RM+  G  P+   +N++IN  C+  +  +E A  L   + ++   
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVG-- 573

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
             LP++VT+  +  G CK+G V+ A ++       G + +V  Y  L  G    G  + A
Sbjct: 574 -YLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           + L  EMV++G  P+   Y   I+ L     +E A     +MI K   P   TY+ L + 
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 404 LCRNGCVKQAF-KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           LC  G V +AF +    +    +VG    Y+ LI+  CK+  + AA +L   MI RG +P
Sbjct: 693 LCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
             +T  +L DG  + G  E A ++ + M      P+   + +I++GL K    D +  LL
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS---DESGKLL 809

Query: 523 QASQ 526
           +  Q
Sbjct: 810 KLVQ 813



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 118/251 (47%), Gaps = 20/251 (7%)

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA-----------CTQI--- 159
           L ++G L  A + +PL    GL    E+ +A   + +A  R            CT +   
Sbjct: 569 LEMVGYLPDAVTYTPLCI--GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQ 626

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A  + Q++  +G +    A+   ++ L+K  ++    K + EM+  G    V T+
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATY 686

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
             ++ ALC    ++EA   +  ML  G +  +V+ ++ +I+  C+   ++ ALKLF  M 
Sbjct: 687 TALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM- 745

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +  G+  +P +VT   + +G  + G+ E A+E+   M   G   +  T+  ++DG  +  
Sbjct: 746 ISRGN--VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSD 803

Query: 339 SSEEALRLCDE 349
            S + L+L  E
Sbjct: 804 ESGKLLKLVQE 814


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 242/478 (50%), Gaps = 13/478 (2%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  LS LV   +  +  +L+KE+++  +  N +T+N++I   CK  ++ +A+S++  M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           SG+ PN    N ++   C++G +  ALKLFR+M        LP S +HN ++ GF   GR
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREM---QAGPFLPTSASHNILLRGFFMAGR 117

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS----EEALRLCDEMVKRGLMPNNV 360
           V  A      M K+       TY  ++ G      S    E+A+    EM   G+ P+  
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE 177

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            Y+  +  L   G +  A  + S M      PD  TY++L  G C+ G   +A  L  ++
Sbjct: 178 SYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           L+     + ++Y+I+IN  CK + +  A ++   MI    +P+ +T+ TLI G+CK G +
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKD-ASLDAAKSLLQASQRIGLLDAI-TYNT 538
           E A++++  M+K+  K  +V YN++I+ LCK    +  A  L    +  GL   I TYN+
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI G+    +++EA   F EM     A N + Y+ILI+ LCK    ++A + ++ M  HG
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEG-KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             P  VTY  L+  F K    +  +   + M L+G +P+   +N +I  L   + A D
Sbjct: 414 YTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAND 471



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 188/391 (48%), Gaps = 10/391 (2%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A +  +++K  G    + +++  LS L     +     L+  M +C    ++ T+N++
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM-TCS--PDIMTYNVL 214

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +   CK  +  EA SL   +LK+G  PNV  +++IIN  C++  +E A ++F KM     
Sbjct: 215 MDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM---IE 271

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG-GSSE 341
            + +PN+VT N +I GFCK G +E A ++   M K G    + TY TLID   +  G   
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            A+ L +++   GL P  V YNS I        +  A+    +M  K   P+  TYSIL 
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILI 390

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GLC+   +K+A K    +          +Y  LIN  CK   L +A      M + G  
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P+ + + TLIDG CK       +++  +M     KP+++ YN +I+GLC    ++ A+ L
Sbjct: 451 PNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEA 552
                     +  T+N LI G     K+ EA
Sbjct: 511 FDGMACAP--NVTTFNFLIRGLCAQKKVEEA 539



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 169/346 (48%), Gaps = 8/346 (2%)

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S  I  +N  +    K+ +      L KE++  GY  NV T++++I   CK  K+EEA  
Sbjct: 205 SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           ++ +M++S   PN V FN +I   C+ G LE A+KLF +M  +   + +   VT+N +I+
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATI---VTYNTLID 321

Query: 298 GFCK-LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
             CK  G V  A ++   +  AG+   + TY +LI G+       EA++  DEM  +   
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CA 380

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           PN + Y+  I  L     ++ A   L DM      P   TY  L  G C+ G +K A   
Sbjct: 381 PNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLF 440

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++       +   +N LI+ LCK+       +LL  M   G  PD+ITY  LI G C 
Sbjct: 441 FEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCS 500

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
              +E A ++++ M      PN+  +N +I GLC    ++ A+++L
Sbjct: 501 ANRVEDAQRLFDGMACA---PNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 8/354 (2%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L S   C      ++ L+    +IG T  A  +++++   G+  ++  ++  ++   KL+
Sbjct: 198 LFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLD 257

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           ++   W+++ +M+    V N  TFN +I   CK   LE+A+ L+  M K G    +V +N
Sbjct: 258 KVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYN 317

Query: 256 MIINEACQV-GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            +I+  C+  G +  A+ LF K   + G  + P  VT+N +I GFC   R+  A +  + 
Sbjct: 318 TLIDSLCKKRGGVYTAVDLFNK---LEGAGLTPTIVTYNSLIQGFCDARRLSEAMQY-FD 373

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
            ++     NV TY+ LIDG  +    +EA +  ++M   G  P  V Y   I+     G+
Sbjct: 374 EMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGE 433

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ AL     M      P+   ++ L  GLC+        +L   +  E    D  +YN 
Sbjct: 434 LKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNC 493

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           LI+ LC +N +  A++L   M      P++ T+  LI G C    +E A  + +
Sbjct: 494 LISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 149/301 (49%), Gaps = 8/301 (2%)

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ +  L +    + AL +  +++     P+  TY++L +G C+ G + QA  + + +  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +A + N L+  LC+   +++A +L   M     +P   ++  L+ G+   G +  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLC---KDAS-LDAAKSLLQASQRIGL-LDAITYN 537
           A+   ++M+K         YN ++ GLC   K A+ L+ A    +  +  G+  D  +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            L++    +G++AEA A+FS M     + + + YN+L++  CK G   +A+ LMK ++  
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G  P+  TY+ ++  + K    EE  E+   M+ S   P+  T+N +I+        ED 
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 658 V 658
           +
Sbjct: 298 I 298


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 167/626 (26%), Positives = 302/626 (48%), Gaps = 63/626 (10%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
           +S  L++ F+  + +   F HS  S+  + H+    RRF +  +++  L+        + 
Sbjct: 73  ESSDLSVWFFKELRDIYGFRHSRFSTLLVSHIFAGQRRFKELQVILEQLLQEEG----KL 128

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
            E L +S+   ++T  V+D L+   +++   + +  +++K+K +  +VS  ++N   S L
Sbjct: 129 CELLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYN---SVL 185

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL--------------- 236
               E  + W +YKE+      +N +T++ V+  LC++ KLE+A+               
Sbjct: 186 YNFRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 241

Query: 237 --------------------SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
                               S +  +LK G+ P+V   N++IN  C VG +  AL+L   
Sbjct: 242 VSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 301

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
              M+   V P+SVT+N ++ GF  LG +  A E+   M+  G+  +V TY  L+ G  +
Sbjct: 302 ---MNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ 358

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVV-YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
            G+ +  L L  +M+ RG    +++ Y+  +  L   G V+ AL +  D+    + PD  
Sbjct: 359 LGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLV 418

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            YSI+  GLC+ G    A ++++++  + ++ ++ +   ++  LC+   L  A+ LL S+
Sbjct: 419 AYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           I  G   DII Y  +IDGY K G IE A+++++   +    PN+  +NS+I G CK  ++
Sbjct: 479 ISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNI 538

Query: 516 DAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
             A+ +L   +  GL+ + ++Y TL++ Y   G I     +  EM+  GI    V Y+++
Sbjct: 539 AEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598

Query: 575 INFLCKF----GCYQQARE--------LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
              LC+      C Q  RE        +++ M   GI PD +TY T++    +       
Sbjct: 599 FKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRA 658

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
            EL   M    + P + TYN +I  L
Sbjct: 659 FELFKKMKSQNLDPTSATYNILIDSL 684



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/602 (23%), Positives = 287/602 (47%), Gaps = 46/602 (7%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
           N V+  FR++ K+  + Y  + + N  ++S      +V  L   ++ +DA+L        
Sbjct: 182 NSVLYNFRETDKM-WDVYKEIKDKNEHTYS-----TVVDGLCRQQKLEDAVLF------- 228

Query: 124 NSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
                       L + E     P+V  F++++ +  ++G  + A      +   G   S+
Sbjct: 229 ------------LRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSV 276

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           ++ N  ++ L  +  I    +L  +M   G   +  T+N+++        +  A  +   
Sbjct: 277 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQD 336

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           ML  G+ P+V+ + +++   CQ+G+++  L L + M  +S    L + + ++ +++G CK
Sbjct: 337 MLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDM--LSRGFELKSIIPYSVMLSGLCK 394

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GRV+ A  + Y +   G+  ++  Y+ +I G  + G  + A+R+ DEM  + ++PN+  
Sbjct: 395 TGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRT 454

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
             + +  L  +G +  A  +L  +I      D   Y+I+  G  ++GC+++A +L    +
Sbjct: 455 LGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAI 514

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +  +  ++N LI   CK+ N+A A+++L  + + GL+P +++Y TL+D Y   G+I+
Sbjct: 515 ESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIK 574

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI------------- 528
              ++   MK     P  V Y+ I  GLC+   L+    +L+  +RI             
Sbjct: 575 SIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLR--ERILEKFNHVLRDMES 632

Query: 529 -GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  D ITYNT+I        ++ AF +F +M++  +      YNILI+ LC +GC ++
Sbjct: 633 EGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRK 692

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A   +  +    +      YTT++        PE  + L + ++  G +   + Y+A+I+
Sbjct: 693 ADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVIN 752

Query: 647 PL 648
            L
Sbjct: 753 RL 754



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 232/470 (49%), Gaps = 17/470 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             ++ LV+    +G   GA +VIQ +  KG S  +  +   L    +L  I     L K+
Sbjct: 312 VTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKD 371

Query: 207 MVSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           M+S G+ ++++  +++++  LCK  +++EALSL+Y +   G+ P++V ++++I+  C++G
Sbjct: 372 MLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLG 431

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
             + A++++ +M       +LPNS T   I+ G C+ G +  A  +  ++I +G   ++ 
Sbjct: 432 KFDMAVRVYDEMCY---KRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDII 488

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  +IDGYA+ G  EEAL L    ++ G+ PN   +NS I+      ++  A  +L  +
Sbjct: 489 LYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVI 548

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + P   +Y+ L       G +K   +L  ++  E +     +Y+++   LC+   L
Sbjct: 549 KLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKL 608

Query: 446 AAAKQLLSSMIVR------------GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
               Q+L   I+             G+ PD ITY T+I   C+  ++  A ++++ MK  
Sbjct: 609 ENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQ 668

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
              P    YN +I+ LC    +  A   L + Q+  + L    Y T+I  + + G    A
Sbjct: 669 NLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMA 728

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
             +F+++ + G  V+   Y+ +IN LC+     +++    +M+  GI PD
Sbjct: 729 VILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 177/435 (40%), Gaps = 88/435 (20%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLD-SYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
            +LL G     N    L  L+ +L   +E+    P  +  ++    + G  + A  +   
Sbjct: 350 TILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIP--YSVMLSGLCKTGRVDEALSLFYD 407

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L+  G +  + A++  +  L KL +     ++Y EM     + N  T   ++  LC++  
Sbjct: 408 LEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGM 467

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L EA SL   ++ SG   +++ +N++I+   + G +E AL+LF K+ + SG  + PN  T
Sbjct: 468 LLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELF-KVAIESG--ITPNVAT 524

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS--SEEALR---- 345
            N +I G+CK   +  A +I   +   G+  +V +Y TL+D YA  GS  S E LR    
Sbjct: 525 FNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMK 584

Query: 346 -----------------LCD------------------------EMVKRGLMPNNVVYNS 364
                            LC                         +M   G+ P+ + YN+
Sbjct: 585 AEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNT 644

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK--------- 415
            I +L     +  A  +   M  +++ P   TY+IL   LC  GC+++A +         
Sbjct: 645 IIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRN 704

Query: 416 --------------------------LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
                                     L NQ+L+         Y+ +IN LC+ +    +K
Sbjct: 705 VSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESK 764

Query: 450 QLLSSMIVRGLIPDI 464
                M+ RG+ PD+
Sbjct: 765 YFFCLMLSRGISPDL 779


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 262/540 (48%), Gaps = 27/540 (5%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSP-----KLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
           + ++ PSL+   V+ VV     +P     +    F+ ++     F  ++E+   +   L 
Sbjct: 73  IRKVLPSLS---VHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLA 129

Query: 106 NWRRFDDALLLMGNLMS---ANSVSPLEFLEGLLDSYEICKATPA---VFDALVRACTQI 159
               F +A  L+  ++S    NS S       +  S    + TP    + DAL+   T +
Sbjct: 130 VHEMFTEAQSLIELVVSRKGKNSAS------SVFISLVEMRVTPMCGFLVDALMITYTDL 183

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A    +  +     V I    N L  ++KLN  G  W  Y E++  G+  NV  F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+++   CKE  + +A  ++  + K  + P VV FN +IN  C+VG+L+   +L  +M  
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM-- 301

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                  P+  T++ +IN  CK  +++ A  +   M K G+  N   + TLI G++R G 
Sbjct: 302 -EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +       +M+ +GL P+ V+YN+ ++     GD+  A  ++  MI + + PD  TY+ 
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G CR G V+ A ++  ++ +  +  D   ++ L+  +CK   +  A++ L  M+  G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           + PD +TY  ++D +CK G+ +   ++ + M+     P++V YN ++NGLCK   +  A 
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL A   IG++ D ITYNTL+ G+  +   ++ +    E   +GI  +   Y  ++N L
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPE---IGIVADLASYKSIVNEL 597



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 209/378 (55%), Gaps = 9/378 (2%)

Query: 283 DSVLP-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
           D+  P N    N ++N FCK G +  A+++   + K  +   V ++ TLI+GY + G+ +
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           E  RL  +M K    P+   Y++ I+ L  E  ++GA  +  +M  + + P+   ++ L 
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G  RNG +    + + ++L + +  D   YN L+N  CK+ +L AA+ ++  MI RGL 
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD ITY TLIDG+C+GG++E A+++ + M +   + + V +++++ G+CK+  +  A+  
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L+   R G+  D +TY  +++ +   G     F +  EM++ G   + V YN+L+N LCK
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC-SPEEVIELHDDMVLSGVSPDNQ 639
            G  + A  L+  M+  G++PD +TY TL+    ++  S +  I+  +     G+  D  
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPE----IGIVADLA 588

Query: 640 TYNAIISPLLGEKSAEDQ 657
           +Y +I++ L  +++++D 
Sbjct: 589 SYKSIVNEL--DRASKDH 604



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 131/228 (57%), Gaps = 1/228 (0%)

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++L+     + Y +NIL+N  CK  N++ A+++   +  R L P ++++ TLI+GYCK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
           N++   ++   M+K   +P++  Y+++IN LCK+  +D A  L     + GL+ + + + 
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLI+G+  NG+I      + +M + G+  + V YN L+N  CK G    AR ++  MI  
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           G+ PD +TYTTL+  F +    E  +E+  +M  +G+  D   ++A++
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 50/103 (48%)

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           +  + E+ + G  +N   +NIL+N  CK G    A+++   +    + P  V++ TL+  
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           + K  + +E   L   M  S   PD  TY+A+I+ L  E   +
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 243/467 (52%), Gaps = 7/467 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYR 241
            +N  ++   K   +     L++ M   G    N+ T++++I   CK  ++ E L L   
Sbjct: 151 TYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEE 210

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M + G+  +V  ++ +I+  C  GD+E   +LF +M       V PN VT++C++ G  +
Sbjct: 211 MEREGLKADVFVYSSLISAFCGEGDIETGRELFDEM---LRRKVSPNVVTYSCLMQGLGR 267

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR   A E+   M   G+  +V  Y  L DG  + G + +A+++ D MV++G  P  + 
Sbjct: 268 TGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLT 327

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  ++ L  E  ++ A  V+  M+ K   PD  TY+ L KGLC  G + +A  L   +L
Sbjct: 328 YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLL 387

Query: 422 EE--HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
            E  H+  D ++ N LI  LCK   +  A ++ SSM+  GL  +I+TY  LI+GY     
Sbjct: 388 SEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARK 447

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNT 538
           +  A+++++   +    PN + Y+ +INGLCK   L  A+ L    +  G+    I YN 
Sbjct: 448 LIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNA 507

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L+        + +A ++F EMRNV   V+ V +NI+I+   K G  + A+EL+  M +  
Sbjct: 508 LMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           ++PD VT++ L+ RFSK    +E + L++ MV  G  P    +++++
Sbjct: 568 LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 226/448 (50%), Gaps = 7/448 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS--GIWPNVVCFNMIINEACQV 264
           M   G+  NV   NLV+   C+  + ++A+SL+ +M ++   + P+ V +N ++N  C+ 
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             L  A  LF  M    G    PN VT++ +I+ +CK G V     +   M + G+  +V
Sbjct: 163 KRLAEARVLFEAMK--KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADV 220

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             Y++LI  +   G  E    L DEM++R + PN V Y+  +  L   G    A  +L D
Sbjct: 221 FVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKD 280

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M  + + PD   Y++L  GLC+NG    A K+ + ++++       +YN+++N LCK + 
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVIY 502
           +  A  ++  M+ +G  PD +TY TL+ G C  G I  A+ +++ +  +K   KP++   
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++I GLCK+  +  A  +  +   +GL  + +TYN LI GY    K+ EA  ++     
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G + N + Y+++IN LCK      AR L   M   GI P  + Y  L+T   +  S E+
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLL 649
              L  +M     + D  ++N II   L
Sbjct: 521 ARSLFQEMRNVNHNVDVVSFNIIIDGTL 548



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 233/478 (48%), Gaps = 7/478 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A +  + +L K  +      +Y +MVS   +    + + +  +         A S+   M
Sbjct: 44  ACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLM 103

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            K G   NV   N+++   C+ G  + A+ LF +M   + D V+P+ VT+N ++NGFCK 
Sbjct: 104 TKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMK-RNYDCVVPDCVTYNTLVNGFCKA 162

Query: 303 GRVEFAEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
            R+  A  +  AM K G DC  N+ TY+ LID Y + G   E L L +EM + GL  +  
Sbjct: 163 KRLAEARVLFEAMKKGG-DCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVF 221

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           VY+S I     EGD+E    +  +M+ + + P+  TYS L +GL R G  ++A ++   +
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
               +  D  +Y +L + LCK+     A ++L  M+ +G  P  +TY  +++G CK   +
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRM 341

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL--LQASQRIGL-LDAITYN 537
           + A  V E M K  KKP+ V YN+++ GLC    +  A  L  L  S++  +  D  T N
Sbjct: 342 DDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCN 401

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LI G    G++ +A  + S M  +G+  N V YN LI          +A +L K  +  
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           G  P+ +TY+ ++    K         L   M  SG+ P    YNA+++ L  E S E
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLE 519



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 201/401 (50%), Gaps = 4/401 (0%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K +P V  +  L++   + G    A ++++ +  +G    + A+      L K    G  
Sbjct: 250 KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDA 309

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            K+   MV  G      T+N+V+  LCKE ++++A  +   M+K G  P+ V +N ++  
Sbjct: 310 IKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKG 369

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C  G +  A+ L+ K+ +     V P+  T N +I G CK GRV  A  I  +M++ G+
Sbjct: 370 LCGAGKIHEAMDLW-KLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGL 428

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N+ TY  LI+GY       EAL+L    V+ G  PN++ Y+  I+ L     +  A  
Sbjct: 429 QGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARG 488

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +   M D  I P    Y+ L   LCR   ++QA  L  ++   +   D  S+NI+I+   
Sbjct: 489 LFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTL 548

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+ ++ +AK+LLS M +  L+PD +T+  LI+ + K G ++ A+ +YE M      P +V
Sbjct: 549 KAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVV 608

Query: 501 IYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLI 540
           +++S++ G       +   SLL Q + +  +LD+   +T++
Sbjct: 609 VFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTIL 649



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 233/488 (47%), Gaps = 9/488 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+    + G       ++++++ +G    +  +++ +S      +I    
Sbjct: 181 CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGR 240

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ EM+      NV T++ ++  L +  +  EA  +   M   G+ P+VV + ++ +  
Sbjct: 241 ELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G    A+K+   M V  G+   P ++T+N ++NG CK  R++ A  +   M+K G  
Sbjct: 301 CKNGRAGDAIKVLDLM-VQKGEE--PGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKK 357

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMV--KRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            +  TY TL+ G    G   EA+ L   ++  K  + P+    N+ I  L  EG V  A 
Sbjct: 358 PDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAA 417

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + S M++  +  +  TY+ L +G      + +A KL    +E     ++ +Y+++IN L
Sbjct: 418 RIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGL 477

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   L+ A+ L   M   G+ P +I Y  L+   C+  ++E A  +++ M+ V    ++
Sbjct: 478 CKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDV 537

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V +N II+G  K   + +AK LL     + L+ DA+T++ LIN +   G + EA  ++ +
Sbjct: 538 VSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEK 597

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT---RFSK 615
           M + G     V ++ L+      G  ++   L+  M    ++ D    +T++      S+
Sbjct: 598 MVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657

Query: 616 NCSPEEVI 623
           N   E+++
Sbjct: 658 NLDVEKIL 665



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 4/304 (1%)

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+    ++ I  L      +  + V   M+   + P   + S LT+          AF +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI--VRGLIPDIITYGTLIDGY 474
            + + +     + Y+ N+++   C+S     A  L S M      ++PD +TY TL++G+
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 475 CKGGNIEGAVQVYENMKKV-EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           CK   +  A  ++E MKK  + +PNLV Y+ +I+  CK   +     LL+  +R GL  D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              Y++LI+ +   G I     +F EM    ++ N V Y+ L+  L + G +++A E++K
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            M   G+ PD V YT L     KN    + I++ D MV  G  P   TYN +++ L  E 
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339

Query: 653 SAED 656
             +D
Sbjct: 340 RMDD 343



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           S + L      +++ + A  +LS M  RG   ++     ++ G+C+ G  + A+ ++  M
Sbjct: 79  SLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM 138

Query: 491 KKVEK--KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG--LLDAITYNTLINGYFIN 546
           K+      P+ V YN+++NG CK   L  A+ L +A ++ G    + +TY+ LI+ Y  +
Sbjct: 139 KRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKS 198

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G++ E   +  EM   G+  +   Y+ LI+  C  G  +  REL   M+   + P+ VTY
Sbjct: 199 GEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTY 258

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + L+    +     E  E+  DM   GV PD   Y  +   L     A D +
Sbjct: 259 SCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAI 310


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 266/516 (51%), Gaps = 7/516 (1%)

Query: 133 EGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           E L    E  ++ P  +  + ++      G  E AY ++++L+ +G   S+ ++N+ L+ 
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 363

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K  ++     L+ E++      N +T+N++I  LC   ++EEA  +   M  + ++PN
Sbjct: 364 LGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 422

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           ++  N++++  C+   LE A K+F      S     P+ VT+  +I+G  K G+V+ A  
Sbjct: 423 LLTVNIMVDRLCKARKLEEAYKIFESA---SQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 479

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+ AG + N   Y +LI  +   G  E+  ++  E+++RG  P+  + N+ +  +F
Sbjct: 480 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVF 539

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+VE    +  D+      PD  +YSIL  GL + G  ++   + + + ++    DA 
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 599

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN +++  CKS  +  A ++L  M  + + P + TYG ++DG  K   ++ A  ++E  
Sbjct: 600 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 659

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
           K    + N+V+Y+S+I+G  K   +D A  +L+   + GL   + T+N+L++      +I
Sbjct: 660 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 719

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            EA   F  M+ +    N   Y+ILIN LC+   Y +A    + M   G++P+ VTYTT+
Sbjct: 720 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 779

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           ++  +K  +  +   L +    +G  PD  ++NA+I
Sbjct: 780 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 815



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 226/455 (49%), Gaps = 8/455 (1%)

Query: 198 GRF---WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           GRF   +KL + +   G + +V +FN ++  L K+ K++EALSL+  ++K    PN   +
Sbjct: 333 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTY 391

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N+II+  C  G +E A   +R +  M   S+ PN +T N +++  CK  ++E A +I  +
Sbjct: 392 NIIIDMLCLGGRVEEA---YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
             + G + +  TY +LIDG  + G  +EA RL ++M+  G   N VVY S I   F  G 
Sbjct: 449 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 508

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            E    +  ++I +   PD    +     + + G V++   +   +     + D  SY+I
Sbjct: 509 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 568

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ L K+        +  +M  +G   D   Y  ++DG+CK G +  A ++ E MK+  
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 628

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            +P +  Y +I++GL K   LD A  L + ++  G+ L+ + Y++LI+G+   G+I EA+
Sbjct: 629 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 688

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  EM   G+  N   +N L++ L K     +A    + M      P+  TY+ L+   
Sbjct: 689 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 748

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +     +      DM   G+ P+  TY  +IS L
Sbjct: 749 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 783



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 144/576 (25%), Positives = 254/576 (44%), Gaps = 28/576 (4%)

Query: 96  SSCA-IVHLLVNWRRFDDALL-------------------LMGNLMSANSVSPLEFLEGL 135
            +CA +   LV  RR DDA+L                   L+G L  A +  P   LE L
Sbjct: 145 QACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGAL--AEARRPERALELL 202

Query: 136 LDSYEIC-KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
               E+  +    +F  LVRA  + G    A  ++ ++K       I  +N  +    K 
Sbjct: 203 RQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKA 262

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             +   WK + E+ + G   +  ++  +I+ LCK  +L EA  L+ +M      P    +
Sbjct: 263 GNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 322

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +I      G  E A KL  ++        +P+ V+ N I+    K  +V+ A  + + 
Sbjct: 323 NTMIMGYGSAGRFEDAYKLLERL---RERGCIPSVVSFNSILTCLGKKRKVDEALSL-FE 378

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           ++K   + N  TY  +ID    GG  EEA R+ DEM    L PN +  N  +  L     
Sbjct: 379 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 438

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A  +      +   PD  TY  L  GL + G V +A++L  ++L+     +   Y  
Sbjct: 439 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 498

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI             ++   +I RG  PD+    T +D   K G +E    ++E+++   
Sbjct: 499 LIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 558

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
             P++  Y+ +I+GL K        ++  A ++ G  LDA  YN +++G+  +GK+ +A+
Sbjct: 559 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 618

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  EM+   +      Y  +++ L K     +A  L +     GI  + V Y++L+  F
Sbjct: 619 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 678

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            K    +E   + ++M+  G++P+  T+N+++  L+
Sbjct: 679 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 714



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 144/596 (24%), Positives = 259/596 (43%), Gaps = 100/596 (16%)

Query: 2   FSAFCNCLYKS---NSPLSRAFHVGKQFANP--STEDIVFRAICVNLR-QRKWKILEQM- 54
           F++   CL K    +  LS  F V K+ A P  ST +I+   +C+  R +  ++IL++M 
Sbjct: 357 FNSILTCLGKKRKVDEALS-LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 415

Query: 55  -APSLTNSL-VNRVVSEFRKSPKLALEFYTWVGENNRF-SHSLESSCAIVHLLVNWRRFD 111
            A    N L VN +V    K+ KL   +  +   + R  +    + C+++  L    + D
Sbjct: 416 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 475

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           +A  L   ++ A                    A P V+ +L+R     G  E  + + ++
Sbjct: 476 EAYRLFEKMLDAGH-----------------NANPVVYTSLIRNFFIHGRKEDGHKIFKE 518

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L  +G    +   N ++  + K  E+ +   +++++ S G++ +V +++++I+ L K  +
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             E  ++++ M + G                      FAL                ++  
Sbjct: 579 ARETSNIFHAMKQQG----------------------FAL----------------DARA 600

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +++GFCK G+V  A EI   M +  +   V TY  ++DG A+    +EA  L +E  
Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +G+  N V+Y+S I      G ++ A  +L +M+ K + P+ +T++ L   L +   + 
Sbjct: 661 SKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEIN 720

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A      + E     + Y+Y+ILIN LC+      A      M  +GL+P+++TY T+I
Sbjct: 721 EALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 780

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G  K GNI  A  ++E  K               NG                    G+ 
Sbjct: 781 SGLAKVGNITDAYSLFERFKA--------------NG--------------------GIP 806

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           DA ++N LI G     +  EA+ +F E R  G  +N      L++ L K  C +QA
Sbjct: 807 DAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 193/445 (43%), Gaps = 43/445 (9%)

Query: 249 PNVVCFNMI--INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           PN  C ++   +  A ++ D   A+ + R++         P    +  +I    +  R E
Sbjct: 143 PNQACAHLAAALVRARRLDDAVLAVAVMRRL------KFRPAFSAYTVLIGALAEARRPE 196

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A E+   M + G +  V  + TL+   AR G   +AL L DE+    L P+ V+YN  I
Sbjct: 197 RALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCI 256

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
                 G+V+ A     ++  + + PD  +Y+ +   LC+ G + +A +L  Q+  E  V
Sbjct: 257 DCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV 316

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII--------------------- 465
             AY+YN +I     +     A +LL  +  RG IP ++                     
Sbjct: 317 PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSL 376

Query: 466 -------------TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
                        TY  +ID  C GG +E A ++ + M+     PNL+  N +++ LCK 
Sbjct: 377 FEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 436

Query: 513 ASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             L+ A  + + ASQR    D +TY +LI+G    G++ EA+ +F +M + G   N V Y
Sbjct: 437 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 496

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI      G  +   ++ K +I  G  PD     T +    K    E+   + +D+  
Sbjct: 497 TSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS 556

Query: 632 SGVSPDNQTYNAIISPLLGEKSAED 656
            G  PD ++Y+ +I  L     A +
Sbjct: 557 YGFLPDVRSYSILIHGLTKAGQARE 581



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 2/197 (1%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P    Y  LI    +    E A+++   M++V  +  + ++ +++  L ++  +  A +L
Sbjct: 177 PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 236

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +   +   L  D + YN  I+ +   G +  A+  F E++  G+  + V Y  +I  LCK
Sbjct: 237 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCK 296

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A EL   M     +P    Y T++  +      E+  +L + +   G  P   +
Sbjct: 297 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 356

Query: 641 YNAIISPLLGEKSAEDQ 657
           +N+I++  LG+K   D+
Sbjct: 357 FNSILT-CLGKKRKVDE 372


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 168/620 (27%), Positives = 296/620 (47%), Gaps = 22/620 (3%)

Query: 45  QRKWKIL---EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           +R W+I    E ++  L    V  ++      PKL L F+ ++G +  F HS  S C ++
Sbjct: 52  KRSWEIALSSELVSRRLKTIHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILI 111

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK-ATPAVFDALVRACTQIG 160
           H LV    F  A  L+   +   ++ P E  + L   YE CK ++ + FD L++   +  
Sbjct: 112 HALVQANLFWPASSLL-QTLLLRALKPSEVFDALFSCYEKCKLSSSSSFDLLIQHYVR-- 168

Query: 161 ATEGAYDVIQKLKVKGHSVS----IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            +    D +   K+    VS    +   +  L  LVK    G   +L+ +M++ G   +V
Sbjct: 169 -SRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDV 227

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
             +  VI +LC+   L  A  +  +M  +G   N+V +N++I+  C+        K++  
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCK------KQKVWEA 281

Query: 277 MGV---MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           +G+   ++G  + P+ VT+  ++ G CK+   E   E+   M++     +    ++L++G
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             + G  EEAL L   + + G+ PN  VYN+ I  L    + + A  +   M    +CP+
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TYSIL    CR G +  A     ++++  +    Y YN LIN  CK  +++AA+ L++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMA 461

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            MI + L P ++TY +L+ GYC  G I  A+++Y  M      P++  + ++++GL +  
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAG 521

Query: 514 SL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            + DA K   + ++     + +TYN +I GY   G +++AF   +EM   GI  +   Y 
Sbjct: 522 LIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYR 581

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+ LC  G   +A+  +  +       + + YT L+  F +    EE + +  DM L 
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLR 641

Query: 633 GVSPDNQTYNAIISPLLGEK 652
           GV  D   Y  +I   L  K
Sbjct: 642 GVDLDLVCYGVLIDGSLKHK 661



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 165/657 (25%), Positives = 289/657 (43%), Gaps = 128/657 (19%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++H LV +R F  A+ L  ++++   + P        D Y        ++  ++R+  +
Sbjct: 197 ALLHGLVKFRHFGLAMELFDDMINVG-IRP--------DVY--------IYTGVIRSLCE 239

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +     A ++I +++  G  V+I  +N  +  L K  ++     + K++       +V T
Sbjct: 240 LKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVT 299

Query: 219 FNLVIYALCK-----------------------------------ECKLEEALSLYYRML 243
           +  ++  LCK                                     K+EEAL+L  R+ 
Sbjct: 300 YCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVA 359

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           + G+ PN+  +N +I+  C+  + + A  LF +MG +    + PN VT++ +I+ FC+ G
Sbjct: 360 EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIG---LCPNDVTYSILIDMFCRRG 416

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +++ A      MI  G+  +V  Y +LI+G+ + G    A  L  EM+ + L P  V Y 
Sbjct: 417 KLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S +    ++G +  AL +  +M  K I P  +T++ L  GL R G ++ A KL  ++ E 
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++  +  +YN++I   C+  N++ A + L+ MI +G++PD  +Y  LI G C  G    A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL---------------------- 521
               + + K   + N + Y  +++G C++  L+ A S+                      
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656

Query: 522 -LQASQR---IGLL----------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            L+   R   +GLL          D + Y ++I+     G   EAF ++  M N G   N
Sbjct: 657 SLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716

Query: 568 KVGYNILINFLCK-------------------------FGCY-----------QQARELM 591
           +V Y  +IN LCK                         +GC+           ++A EL 
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELH 776

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              IL G++ +  TY  L+  F +    EE  EL   M+  GVSPD  TY  +IS L
Sbjct: 777 NA-ILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISEL 832



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 263/593 (44%), Gaps = 24/593 (4%)

Query: 57  SLTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
           S + + V+ +V   RK  K+  AL     V E    S ++    A++  L   R FD+A 
Sbjct: 329 SPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG-VSPNIFVYNALIDSLCKGRNFDEAE 387

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           LL  + M    + P                    +  L+    + G  + A   + ++  
Sbjct: 388 LLF-DRMGKIGLCP----------------NDVTYSILIDMFCRRGKLDTALSFLGEMID 430

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G   S++ +N+ ++   K  +I     L  EM++      V T+  ++   C + K+ +
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           AL LY+ M   GI P++  F  +++   + G +  A+KLF +M   +   V PN VT+N 
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN---VKPNRVTYNV 547

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I G+C+ G +  A E    MI+ GI  +  +Y  LI G    G + EA    D + K  
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
              N + Y   +H    EG +E AL V  DM  + +  D   Y +L  G  ++   K   
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L  ++ +  +  D   Y  +I+   K+ +   A  +   MI  G +P+ +TY  +I+G 
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD-ASLDAAKSLLQASQRIGLLDA 533
           CK G +  A  +   M+     PN V Y   ++ L K    +  A  L  A  +  L + 
Sbjct: 728 CKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANT 787

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TYN LI G+   G++ EA  + + M   G++ + + Y  +I+ LC+    ++A EL   
Sbjct: 788 ATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNS 847

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           M   GI PD V Y TL+          +  EL ++M+  G+ P+ +T    IS
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 165/352 (46%), Gaps = 9/352 (2%)

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
           +  M K  +   VRT + L+ G  +      A+ L D+M+  G+ P+  +Y   I  L  
Sbjct: 180 KMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCE 239

Query: 372 EGDVEGALFVLSDM----IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
             D+  A  ++  M     D +I P    Y++L  GLC+   V +A  +   +  + +  
Sbjct: 240 LKDLSRAKEMIVQMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKELKP 295

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +Y  L+  LCK        +++  M+     P      +L++G  K G +E A+ + 
Sbjct: 296 DVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLV 355

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           + + +    PN+ +YN++I+ LCK  + D A+ L     +IGL  + +TY+ LI+ +   
Sbjct: 356 KRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRR 415

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           GK+  A +   EM ++G+  +   YN LIN  CKFG    A  LM  MI   + P  VTY
Sbjct: 416 GKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTY 475

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           T+L+  +       + + L+ +M   G+ P   T+  ++S L       D V
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 283/587 (48%), Gaps = 17/587 (2%)

Query: 79  EFYTWVGENNRFSHS-LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD 137
           EF  W+ E +  S   +     I  ++ N R       L   L+   +   ++    ++ 
Sbjct: 120 EFDEWIKEVDVGSDGKIRYEDFIARMVANDRNLSYRERLRSGLVDIKADDAIDLFRDMIH 179

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVK 193
           S    +  P V D   R  + I  T+  YD++    +++++KG + +++  +  ++   +
Sbjct: 180 S----RPLPTVID-FSRLFSAIAKTK-QYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 233

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
             ++   +    +++  GY  N  TF+ +I  LC E ++ EAL L  RM++ G  P+++ 
Sbjct: 234 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 293

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N ++N  C  G    A+ L  KM V  G    PN+VT+  ++N  CK G+   A E+  
Sbjct: 294 INTLVNGLCLSGKEAEAMLLIDKM-VEYG--CQPNAVTYGPVLNVMCKSGQTALAMELLR 350

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M +  I  +   Y+ +IDG  + GS + A  L +EM  +G+  N + YN  I      G
Sbjct: 351 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 410

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             +    +L DMI + I P+  T+S+L     + G +++A +LH +++   +  D  +Y 
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 470

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+  CK N+L  A Q++  M+ +G  P+I T+  LI+GYCK   I+  ++++  M   
Sbjct: 471 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 530

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAE 551
               + V YN++I G C+   L+ AK L Q   S+++   + +TY  L++G   NG+  +
Sbjct: 531 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP-NIVTYKILLDGLCDNGESEK 589

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +F ++    + ++   YNI+I+ +C       A +L   + L G+ P   TY  ++ 
Sbjct: 590 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 649

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              K     E   L   M   G +PD  TYN +I   LG+  A   V
Sbjct: 650 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 696



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 246/490 (50%), Gaps = 4/490 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+  + K+   G+  +   ++  ++ L     +    +L   MV  G+  ++ T N ++ 
Sbjct: 240 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 299

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   K  EA+ L  +M++ G  PN V +  ++N  C+ G    A++L RKM      +
Sbjct: 300 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERN 356

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +  ++V ++ II+G CK G ++ A  +   M   GI  N+ TY  LI G+   G  ++  
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 416

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L  +M+KR + PN V ++  I     EG +  A  +  +MI + I PD  TY+ L  G 
Sbjct: 417 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   + +A ++ + ++ +    +  ++NILIN  CK+N +    +L   M +RG++ D 
Sbjct: 477 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 536

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TLI G+C+ G +  A ++++ M   +  PN+V Y  +++GLC +   + A  + + 
Sbjct: 537 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 596

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            ++  + LD   YN +I+G     K+ +A+ +F  +   G+      YNI+I  LCK G 
Sbjct: 597 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 656

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A  L + M   G  PD  TY  L+     +    + ++L +++   G S D  T   
Sbjct: 657 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 716

Query: 644 IISPLLGEKS 653
           +I  L  +K+
Sbjct: 717 VIDMLSDDKA 726



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 205/401 (51%), Gaps = 4/401 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  ++    + G T  A ++++K++ +   +    ++  +  L K   +   +
Sbjct: 322 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 381

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM   G   N+ T+N++I   C   + ++   L   M+K  I PNVV F+++I+  
Sbjct: 382 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A +L ++M +  G  + P+++T+  +I+GFCK   ++ A ++   M+  G D
Sbjct: 442 VKEGKLREAEELHKEM-IHRG--IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 498

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+RT+  LI+GY +    ++ L L  +M  RG++ + V YN+ I      G +  A  +
Sbjct: 499 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 558

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ + + P+  TY IL  GLC NG  ++A ++  ++ +  M  D   YNI+I+ +C 
Sbjct: 559 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 618

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           ++ +  A  L  S+ ++G+ P + TY  +I G CK G +  A  ++  M++    P+   
Sbjct: 619 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 678

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           YN +I     D     +  L++  +R G  +DA T   +I+
Sbjct: 679 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 719


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 258/518 (49%), Gaps = 6/518 (1%)

Query: 60  NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           N L  +++S     P L L +Y+W+ +N+  S SLE +  ++H L N +R+      +  
Sbjct: 68  NELFRQLISS-ELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDG 126

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
            +   S   +  +   +   +       + D LV A       E  ++  ++    G+ +
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S  +    +  L+K N       +YKEM+      NV TFN+VI ALCK  K+ +A  + 
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M   G  PNVV +N +I+  C++G      K    +  M  + V PN  T N +I+GF
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            K   +  + ++   M+   +  NV +Y +LI+G   GG   EA+ + D+MV  G+ PN 
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + YN+ I+       ++ AL +   +  +   P    Y++L    C+ G +   F L  +
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +  E +V D  +YN LI  LC++ N+ AAK+L   +  +GL PD++T+  L++GYC+ G 
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA---KSLLQASQRIGLLDAITY 536
              A  + + M K+  KP  + YN ++ G CK+ +L AA   ++ ++  +R+  ++  +Y
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL-RMNVASY 544

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           N L+ GY   GK+ +A  + +EM   G+  N++ Y I+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 194/376 (51%), Gaps = 4/376 (1%)

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR-GGSSE-- 341
           + PN  T N +IN  CK G++  A ++   M   G   NV +Y TLIDGY + GG+ +  
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +A  +  EMV+  + PN   +N  I   + + ++ G++ V  +M+D+ + P+  +Y+ L 
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GLC  G + +A  + ++++   +  +  +YN LIN  CK++ L  A  +  S+  +G +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P    Y  LID YCK G I+    + E M++    P++  YN +I GLC++ +++AAK L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                  GL D +T++ L+ GY   G+  +A  +  EM  +G+    + YNI++   CK 
Sbjct: 459 FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518

Query: 582 GCYQQARELMKVMILHGIIP-DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           G  + A  +   M     +  +  +Y  L+  +S+    E+   L ++M+  G+ P+  T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578

Query: 641 YNAIISPLLGEKSAED 656
           Y  +   ++ +    D
Sbjct: 579 YEIVKEEMVDQGFVPD 594



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL--QASQ 526
           + +DG+ + G+      ++  +   +     V  NSII  +   A  + ++  L  +A +
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDN----VCVNSIIADMLVLAYANNSRFELGFEAFK 177

Query: 527 RIGL----LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           R G     L A++   L+       + A+   ++ EM    I  N   +N++IN LCK G
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSK---NCSPEEVIELHDDMVLSGVSPDNQ 639
              +AR++M+ M ++G  P+ V+Y TL+  + K   N    +   +  +MV + VSP+  
Sbjct: 238 KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297

Query: 640 TYNAII 645
           T+N +I
Sbjct: 298 TFNILI 303


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 267/519 (51%), Gaps = 7/519 (1%)

Query: 133 EGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           E L    E  ++ P  +  + ++      G  E AY ++++L+ +G   S+ ++N+ L+ 
Sbjct: 38  EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 97

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K  ++     L+ E++      N +T+N++I  LC   ++EEA  +   M  + ++PN
Sbjct: 98  LGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 156

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           ++  N++++  C+   LE A K+F      S     P+ VT+  +I+G  K G+V+ A  
Sbjct: 157 LLTVNIMVDRLCKARKLEEAYKIFESA---SQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 213

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+ AG + N   Y +LI  +   G  E+  ++  E+++RG  P+  + N+ +  +F
Sbjct: 214 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVF 273

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+VE    +  D+      PD  +YSIL  GL + G  ++   + + + ++    DA 
Sbjct: 274 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 333

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN +++  CKS  +  A ++L  M  + + P + TYG ++DG  K   ++ A  ++E  
Sbjct: 334 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 393

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
           K    + N+V+Y+S+I+G  K   +D A  +L+   + GL   + T+N+L++      +I
Sbjct: 394 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 453

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            EA   F  M+ +    N   Y+ILIN LC+   Y +A    + M   G++P+ VTYTT+
Sbjct: 454 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 513

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           ++  +K  +  +   L +    +G  PD  ++NA+I  +
Sbjct: 514 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 208/450 (46%), Gaps = 5/450 (1%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           WK + E+ + G   +  ++  +I+ LCK  +L EA  L+ +M      P    +N +I  
Sbjct: 3   WKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 62

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
               G  E A KL  ++        +P+ V+ N I+    K  +V+ A  + + ++K   
Sbjct: 63  YGSAGRFEDAYKLLERL---RERGCIPSVVSFNSILTCLGKKRKVDEALSL-FEVMKKDA 118

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + N  TY  +ID    GG  EEA R+ DEM    L PN +  N  +  L     +E A  
Sbjct: 119 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 178

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +      +   PD  TY  L  GL + G V +A++L  ++L+     +   Y  LI    
Sbjct: 179 IFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 238

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
                    ++   +I RG  PD+    T +D   K G +E    ++E+++     P++ 
Sbjct: 239 IHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVR 298

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y+ +I+GL K        ++  A ++ G  LDA  YN +++G+  +GK+ +A+ +  EM
Sbjct: 299 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 358

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           +   +      Y  +++ L K     +A  L +     GI  + V Y++L+  F K    
Sbjct: 359 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 418

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +E   + ++M+  G++P+  T+N+++  L+
Sbjct: 419 DEAYLILEEMMKKGLTPNVYTWNSLLDALV 448



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 235/497 (47%), Gaps = 34/497 (6%)

Query: 2   FSAFCNCLYKS---NSPLSRAFHVGKQFANP--STEDIVFRAICVNLR-QRKWKILEQM- 54
           F++   CL K    +  LS  F V K+ A P  ST +I+   +C+  R +  ++IL++M 
Sbjct: 91  FNSILTCLGKKRKVDEALS-LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 149

Query: 55  -APSLTNSL-VNRVVSEFRKSPKLALEFYTWVGENNRFSH-SLESSCAIVHLLVNWRRFD 111
            A    N L VN +V    K+ KL   +  +   + R  +    + C+++  L    + D
Sbjct: 150 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 209

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           +A  L   ++ A                    A P V+ +L+R     G  E  + + ++
Sbjct: 210 EAYRLFEKMLDAGH-----------------NANPVVYTSLIRNFFIHGRKEDGHKIFKE 252

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L  +G    +   N ++  + K  E+ +   +++++ S G++ +V +++++I+ L K  +
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             E  ++++ M + G   +   +N +++  C+ G +  A ++  +M       V P   T
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM---KEKCVQPTVAT 369

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  I++G  K+ R++ A  +       GI+ NV  Y++LIDG+ + G  +EA  + +EM+
Sbjct: 370 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 429

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K+GL PN   +NS +  L    ++  AL     M +    P+ +TYSIL  GLCR     
Sbjct: 430 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 489

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF     + ++ +V +  +Y  +I+ L K  N+  A  L       G IPD  ++  LI
Sbjct: 490 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 549

Query: 472 DGYCKGGNIEGAVQVYE 488
           +G     N   A++ Y+
Sbjct: 550 EGM---SNANRAMEAYQ 563



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 122/244 (50%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A+K  +++  + +  D  SY  +I  LCK+  L  A++L + M     +P    Y T+I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           GY   G  E A ++ E +++    P++V +NSI+  L K   +D A SL +  ++    +
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + TYN +I+   + G++ EA+ +  EM +  +  N +  NI+++ LCK    ++A ++ +
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
                G  PD VTY +L+    K    +E   L + M+ +G + +   Y ++I       
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 653 SAED 656
             ED
Sbjct: 242 RKED 245



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A+  F E++  G+  + V Y  +I  LCK G   +A EL   M     +P    Y T++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +      E+  +L + +   G  P   ++N+I++  LG+K   D+ 
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT-CLGKKRKVDEA 107


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 291/585 (49%), Gaps = 10/585 (1%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
           +   T++L++  +   R  P  AL  +           SL +   ++H+L + RRF  A 
Sbjct: 8   SSPFTHALLHAALRRVRLDPDAALHLFRLA----PCRPSLLAHAQLLHILAHARRFPAAR 63

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
            L+ +L+SA+SV+P  F + L++ Y+    + A FD L+RA    G  + A  V  ++  
Sbjct: 64  ALLASLLSAHSVAPTLFPD-LVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGK 122

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G   ++ + N  L+ LV+  +IG    ++++M   G + +  T  ++  A C++ ++  
Sbjct: 123 AGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAH 182

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A      M + G+  N+V ++ +++  C++G  E A KL   + V     + PN VT+  
Sbjct: 183 AADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQV---KGLSPNVVTYTL 239

Query: 295 IINGFCKLGRVEFAEEIRYAMIK-AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           ++ G+CK GR+E AE++   + +   I  +   Y  LI+GY + G  E+A R+ DEM+  
Sbjct: 240 LVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDA 299

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+  N  VYN+ I+     G +     +L     + +  D ++Y+ L  G CR G + +A
Sbjct: 300 GVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKA 359

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F+  + ++     G   +YN L+N  C    +  A +L   M+ RG++P+ I+  TL+DG
Sbjct: 360 FETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDG 419

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           + K G  E A+ +++         N+V  N++INGLCK+  +  A+ L    +      D
Sbjct: 420 FFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCD 479

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           ++TY TLI+GY   G +  A  +  EM N+G   +   +N  I  L       +  ++  
Sbjct: 480 SLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRV 539

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            M   G+ P+ VTY  L+  + K  +  +   L+ +MV  G+ P+
Sbjct: 540 EMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPN 584



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/555 (27%), Positives = 268/555 (48%), Gaps = 65/555 (11%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ ++    ++G       ++Q  + +G ++  +++N  +    +   + + ++    M
Sbjct: 307 VYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM 366

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+     T+N ++   C    +++AL L++ MLK G+ PN +  + +++   + G  
Sbjct: 367 VRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKT 426

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL L+++        +  N VT N +ING CK  R+  AEE+ + M +    C+  TY
Sbjct: 427 EQALNLWKET---LARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTY 483

Query: 328 ATLIDGYARGGS--------------------------------SEEALRLCD---EMVK 352
            TLIDGY + G                                 ++++ ++ D   EM  
Sbjct: 484 RTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSA 543

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +GL PN V Y + I     EG++  A  +  +M++K + P+ F  S+L     R G V +
Sbjct: 544 KGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDE 603

Query: 413 AFKLHNQVLEEHMVGDAYS--------------------------YNILINYLCKSNNLA 446
           A  +  ++ +  M+ D  +                          +NI+I  LCK   +A
Sbjct: 604 ANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVA 663

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A+ L   + V+G IPD  TY +LI G    G+I+ A  + + M      PN+V YNS+I
Sbjct: 664 DARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLI 723

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLCK  ++  A SL    Q  G+  +AITYNTLI+G+  +G   EAF +  +M   GI 
Sbjct: 724 YGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQ 783

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
                Y ILI+ LC  G  ++A +L+  MI + + P+++TY TL+  +++  + + + +L
Sbjct: 784 PTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKL 843

Query: 626 HDDMVLSGVSPDNQT 640
           +++M + G+ P N T
Sbjct: 844 YNEMHICGLLPANWT 858



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 174/360 (48%), Gaps = 37/360 (10%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           ++  L+  +A  G  ++AL + DEM K G        N  ++ L   GD+  A+ V   M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                 PD FT +I+ K  CR+G V  A     ++ E  +  +  +Y+ +++  C+    
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK---------- 495
             A++LL S+ V+GL P+++TY  L+ GYCK G +E A +V + +K+ EK          
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 496 --------------------------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
                                     + N+ +YN++ING CK   +   + LLQA++  G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           + LD  +YNTL++GY   G + +AF     M   G     + YN L+N  C  G    A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L  +M+  G++P+ ++ +TL+  F K    E+ + L  + +  G++ +  T N +I+ L
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 178/373 (47%), Gaps = 25/373 (6%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+    ++G    A  +  +++  G   S+  +N+F++ L    + G+  
Sbjct: 476 CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN-------VVCF 254
            +  EM + G   N  T+  +I   CKE  L +A  LY+ M++ G+ PN       V CF
Sbjct: 536 DIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCF 595

Query: 255 ---------NMIIN--------EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
                    N+++         + C    L    K+   +  ++G +     +  N +I 
Sbjct: 596 YREGKVDEANLVLQKLADTDMIQDCSASTLNIG-KVAHIIESLAGGNHQSAKIMWNIVIL 654

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CKLGRV  A  +   +   G   +  TY++LI G +  GS + A  L DEM+   L P
Sbjct: 655 GLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTP 714

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V YNS I+ L    +V  A+ + + +  K I P+  TY+ L  G C++G   +AFKL 
Sbjct: 715 NIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLK 774

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++++E +    ++Y ILI+ LC    +  A +LL  MI   + P+ ITY TLI GY + 
Sbjct: 775 QKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARC 834

Query: 478 GNIEGAVQVYENM 490
           GN++   ++Y  M
Sbjct: 835 GNMKAITKLYNEM 847


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 267/519 (51%), Gaps = 7/519 (1%)

Query: 133 EGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           E L    E  ++ P  +  + ++      G  E AY ++++L+ +G   S+ ++N+ L+ 
Sbjct: 170 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 229

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K  ++     L+ E++      N +T+N++I  LC   ++EEA  +   M  + ++PN
Sbjct: 230 LGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 288

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           ++  N++++  C+   LE A K+F      S     P+ VT+  +I+G  K G+V+ A  
Sbjct: 289 LLTVNIMVDRLCKARKLEEAYKIFESA---SQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 345

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+ AG + N   Y +LI  +   G  E+  ++  E+++RG  P+  + N+ +  +F
Sbjct: 346 LFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVF 405

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+VE    +  D+      PD  +YSIL  GL + G  ++   + + + ++    DA 
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDAR 465

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN +++  CKS  +  A ++L  M  + + P + TYG ++DG  K   ++ A  ++E  
Sbjct: 466 AYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEA 525

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
           K    + N+V+Y+S+I+G  K   +D A  +L+   + GL   + T+N+L++      +I
Sbjct: 526 KSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 585

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            EA   F  M+ +    N   Y+ILIN LC+   Y +A    + M   G++P+ VTYTT+
Sbjct: 586 NEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTM 645

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           ++  +K  +  +   L +    +G  PD  ++NA+I  +
Sbjct: 646 ISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 684



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 143/576 (24%), Positives = 253/576 (43%), Gaps = 28/576 (4%)

Query: 96  SSCA-IVHLLVNWRRFDDALL-------------------LMGNLMSANSVSPLEFLEGL 135
            +CA +   LV  RR DDA+L                   L+G L  A +  P   LE L
Sbjct: 11  QACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGAL--AEARRPERALELL 68

Query: 136 LDSYEIC-KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
               E+  +    +F  LVRA  + G    A  ++ ++K       I  +N  +    K 
Sbjct: 69  RQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKA 128

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             +    K + E+ + G   +  ++  +I+ LCK  +L EA  L+ +M      P    +
Sbjct: 129 GNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAY 188

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +I      G  E A KL  ++        +P+ V+ N I+    K  +V+ A  + + 
Sbjct: 189 NTMIMGYGSAGRFEDAYKLLERL---RERGCIPSVVSFNSILTCLGKKRKVDEALSL-FE 244

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           ++K   + N  TY  +ID    GG  EEA R+ DEM    L PN +  N  +  L     
Sbjct: 245 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARK 304

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A  +      +   PD  TY  L  GL + G V +A++L  ++L+     +   Y  
Sbjct: 305 LEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTS 364

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI             ++   +I RG  PD+    T +D   K G +E    ++E+++   
Sbjct: 365 LIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG 424

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
             P++  Y+ +I+GL K        ++  A ++ G  LDA  YN +++G+  +GK+ +A+
Sbjct: 425 FLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAY 484

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  EM+   +      Y  +++ L K     +A  L +     GI  + V Y++L+  F
Sbjct: 485 EILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGF 544

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            K    +E   + ++M+  G++P+  T+N+++  L+
Sbjct: 545 GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 580



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 235/498 (47%), Gaps = 34/498 (6%)

Query: 2   FSAFCNCLYKS---NSPLSRAFHVGKQFANP--STEDIVFRAICVNLR-QRKWKILEQM- 54
           F++   CL K    +  LS  F V K+ A P  ST +I+   +C+  R +  ++IL++M 
Sbjct: 223 FNSILTCLGKKRKVDEALS-LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 281

Query: 55  -APSLTNSL-VNRVVSEFRKSPKLALEFYTWVGENNRFSH-SLESSCAIVHLLVNWRRFD 111
            A    N L VN +V    K+ KL   +  +   + R  +    + C+++  L    + D
Sbjct: 282 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 341

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           +A  L   ++ A                    A P V+ +L+R     G  E  + V ++
Sbjct: 342 EAYRLFEKMLDAGH-----------------NANPVVYTSLIRNFFIHGRKEDGHKVFKE 384

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L  +G    +   N ++  + K  E+ +   +++++ S G++ +V +++++I+ L K  +
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             E  ++++ M + G   +   +N +++  C+ G +  A ++  +M       V P   T
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM---KEKCVQPTVAT 501

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  I++G  K+ R++ A  +       GI+ NV  Y++LIDG+ + G  +EA  + +EM+
Sbjct: 502 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 561

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K+GL PN   +NS +  L    ++  AL     M +    P+ +TYSIL  GLCR     
Sbjct: 562 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 621

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF     + ++ +V +  +Y  +I+ L K  N+  A  L       G IPD  ++  LI
Sbjct: 622 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 681

Query: 472 DGYCKGGNIEGAVQVYEN 489
           +G     N   A++ Y+ 
Sbjct: 682 EGM---SNANRAMEAYQT 696



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 190/440 (43%), Gaps = 44/440 (10%)

Query: 259 NEACQVGDLEFALKLFRKM-------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           N+AC   DL  AL   R++        VM      P    +  +I    +  R E A E+
Sbjct: 10  NQAC--ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M + G +  V  + TL+   AR G   +AL L DE+    L P+ V+YN  I     
Sbjct: 68  LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 127

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G+V+ A     ++  + + PD  +Y+ +   LC+ G + +A +L  Q+  E  V  AY+
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII-------------------------- 465
           YN +I     +     A +LL  +  RG IP ++                          
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 247

Query: 466 --------TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
                   TY  +ID  C GG +E A ++ + M+     PNL+  N +++ LCK   L+ 
Sbjct: 248 KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEE 307

Query: 518 AKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  + + ASQR    D +TY +LI+G    G++ EA+ +F +M + G   N V Y  LI 
Sbjct: 308 AYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 367

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
                G  +   ++ K +I  G  PD     T +    K    E+   + +D+   G  P
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427

Query: 637 DNQTYNAIISPLLGEKSAED 656
           D ++Y+ +I  L     A +
Sbjct: 428 DVRSYSILIHGLTKAGQARE 447



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 2/197 (1%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P    Y  LI    +    E A+++   M++V  +  + ++ +++  L ++  +  A +L
Sbjct: 43  PAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALAL 102

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +   +   L  D + YN  I+ +   G +  A   F E++  G+  + V Y  +I  LCK
Sbjct: 103 VDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCK 162

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A EL   M     +P    Y T++  +      E+  +L + +   G  P   +
Sbjct: 163 AGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVS 222

Query: 641 YNAIISPLLGEKSAEDQ 657
           +N+I++  LG+K   D+
Sbjct: 223 FNSILT-CLGKKRKVDE 238


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 173/666 (25%), Positives = 312/666 (46%), Gaps = 58/666 (8%)

Query: 27  ANPSTEDIVFRAICVNLR-----QRKW-KILEQMAPSLTNSLVNRVVSEFR-KSPKLALE 79
           A+ S  +   R I + LR     +  W    + +A  L    V++++   R  +   AL 
Sbjct: 41  ADASIPNDAVRQILIGLRSFGASKFLWGHHFQTLASVLNTHQVDQILLSLRVDNSDSALF 100

Query: 80  FYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDS 138
            +  +     F HS  S   + H++    +  +   ++  ++    S S     E L +S
Sbjct: 101 LFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNS 160

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           +        V+D L  A ++      A  V+ K+KV    VSI  +N+ L +L       
Sbjct: 161 FRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTD 217

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL---------------------- 236
             W +Y E+ + G  +N  T  ++I  LC++ +L++A+                      
Sbjct: 218 IMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALM 277

Query: 237 -------------SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
                        S +  M+K G+ P+V  +N++++  C  G +E AL+       M   
Sbjct: 278 SGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND---MENH 334

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V P+ VT+N + NGF  LG +  A ++   M+  G++ ++ TY  LI G+ + G+ EE+
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            +L ++M+ +GL  + V Y   +  L   G ++ A+ +L +M    + PD  TYS     
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS----- 449

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
               G V++A +L+ ++  + +  +++  + +I+ L +   ++ A+    S+    +  +
Sbjct: 450 ---RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEE 506

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           II Y  +IDGY K GNI  AV+ Y+ + +    P +V +NS+I G CK   L  A  LL 
Sbjct: 507 IILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLD 566

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             +  GL+  ++TY TL+NGY   G +   F M  EM    I   ++ Y +++  LCK G
Sbjct: 567 TIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 626

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              ++ +L+K M   G+ PD +TY T++  F K    ++  +LH+ M+   + P   TYN
Sbjct: 627 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 686

Query: 643 AIISPL 648
            +I+ L
Sbjct: 687 VLINGL 692



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/479 (27%), Positives = 243/479 (50%), Gaps = 12/479 (2%)

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +G   GA+ V+Q++ + G +  +  +   +    ++  I   +KL ++M+S G   ++ T
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           + +++ +LCK  +++EA+ L + M   G+ P+++ ++         G +E A++L+ +M 
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEM- 463

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 + PNS   + II+G  + G +  A+    ++ K+ +   +  Y  +IDGYA+ G
Sbjct: 464 --CSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 521

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           +  EA+R   +++++G+ P  V +NS I+    +G +  A+ +L  +    + P   TY+
Sbjct: 522 NIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYT 581

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +   F + +++  + +     +Y +++  LCK   L  + QLL  M  R
Sbjct: 582 TLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR 641

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL PD ITY T+I  +CK  +++ A Q++  M +   +P+ V YN +INGLC   +L  A
Sbjct: 642 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 701

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL   Q   + L  + Y T+I  +   G +  A   F +M   G  V+   Y+ +IN 
Sbjct: 702 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 761

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           LCK      A+    +M+ HGI PD      ++  F ++  P  V E+   M+  G+ P
Sbjct: 762 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 268/531 (50%), Gaps = 7/531 (1%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           + L  + +   +C      ++ ++    + G    A D+ +++  +G       +++ + 
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K   + +     ++MV+ G + N  T+N +IY      + +EA+ ++  M +  I P
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILP 322

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +VV FNM++   C+ G ++ A  +F  M  M G +  P+  ++N ++NG+   G +    
Sbjct: 323 DVVTFNMLMGSLCKYGKIKEARDVFDTMA-MKGQN--PDVFSYNIMLNGYATKGCLVDMT 379

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           ++   M+  GI   + T+  LI  YA  G  ++A+ + +EM   G+ PN + Y + I  L
Sbjct: 380 DLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAAL 439

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G ++ A+   + MID+ + PD + Y  L +G C +G + +A +L ++++   M  D 
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             ++ +IN LCK   +  A+ +    +  GL P  + Y  L+DGYC  G +E A++V++ 
Sbjct: 500 VLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGK 548
           M     +PN V+Y +++NG CK   +D   SL +   + G+  + I YN +I+G F  G+
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
              A   F EM   GIA+NK  Y+I++  L K  C+ +A  L K +    +  D +T  T
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAED 656
           ++    +    EE  +L   +  SG+ P   TY+ +I+ L+ E   + AED
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAED 730



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 203/417 (48%), Gaps = 4/417 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+ +  + G  + A DV   + +KG +  + ++N  L+       +     L+  M
Sbjct: 326 TFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G    + TFN++I A      L++A+ ++  M   G+ PNV+ +  +I   C++G +
Sbjct: 386 LGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKM 445

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A++ F +M       V P+   ++C+I GFC  G +  A+E+   ++  G+  ++  +
Sbjct: 446 DDAMEKFNQM---IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLF 502

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +++I+   + G   +A  + D  V  GL P  VVY+  +      G +E AL V   M+ 
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I P+   Y  L  G C+ G + +   L  ++L++ +      YNI+I+ L ++     
Sbjct: 563 AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 622

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK     M   G+  +  TY  ++ G  K    + A+ +++ ++ +  K +++  N++I 
Sbjct: 623 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 682

Query: 508 GLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           G+ +   ++ AK L  +  R GL+   +TY+ +I      G + EA  MFS M+N G
Sbjct: 683 GMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 206/405 (50%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++A    G  + A  +  +++  G   ++  +   ++ L ++ ++    + + +M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +   ++ +I   C    L +A  L   ++ +G+  ++V F+ IIN  C++G +
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G  + P +V ++ +++G+C +G++E A  +  AM+ AGI+ N   Y
Sbjct: 516 MDAQNIF-DLTVNVG--LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM+++G+ P+ ++YN  I  LF  G    A     +M +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  +  TYSI+ +GL +N C  +A  L  ++   ++  D  + N +I  + ++  +  
Sbjct: 633 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 692

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +S+   GL+P ++TY  +I    K G +E A  ++ +M+    +P+  + N ++ 
Sbjct: 693 AKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 752

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            L K   +  A + L +  +R   L+ +T   L++ +   G   E
Sbjct: 753 ELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 163/360 (45%), Gaps = 39/360 (10%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TYA L+D   R    E AL    ++++ GL  + ++ N  +         + AL +L   
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 172

Query: 386 IDKHIC-PDHFTYSILTKGLC-------------------------------------RN 407
             +  C PD F+YSIL K LC                                     + 
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKE 232

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V +A  L  ++++  +  D  +Y+ +++ LCK+  +  A+  L  M+ +G++P+  TY
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI GY   G  + AV+V++ M++    P++V +N ++  LCK   +  A+ +      
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM 352

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G   D  +YN ++NGY   G + +   +F  M   GIA     +N+LI      G   +
Sbjct: 353 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDK 412

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  +   M  HG+ P+ +TYTT++    +    ++ +E  + M+  GV+PD   Y+ +I 
Sbjct: 413 AMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ 472



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 4/224 (1%)

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV-Y 487
           +++Y IL++   +++    A      ++  GL  DII    L+ G+C+    + A+ +  
Sbjct: 111 SHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILL 170

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL---DAITYNTLINGYF 544
               ++   P++  Y+ ++  LC       A  LL+     G +   D + YNT+I+G+F
Sbjct: 171 HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFF 230

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G + +A  +F EM   GI  + V Y+ +++ LCK     +A   ++ M+  G++P+  
Sbjct: 231 KEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW 290

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           TY  L+  +S     +E + +  +M    + PD  T+N ++  L
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSL 334


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 280/551 (50%), Gaps = 16/551 (2%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA------LVRACTQIGATE 163
           F   LL  G   ++  ++ L  L  L +S  +  + P+V DA      L   C Q G  +
Sbjct: 37  FLAVLLRRGRAEASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLD 96

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A  +++ +  +    ++ ++   +  L      G+   L ++M + G   +V T+  +I
Sbjct: 97  AALFLLRVMAHETRPTAV-SYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLI 155

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
             LC    +++A+ L   M +SGI PNVV ++ ++   C+ G  E   K+F +M   SG 
Sbjct: 156 RGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM---SGR 212

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            + P+ V +  +I+  C+ G+V+ A ++   M++ G++ NV TY  LI+   + GS +EA
Sbjct: 213 GIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEA 272

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI--DKHICPDHFTYSILT 401
           + L + M+++G+  + V YN+ I  L    +++ A+ +L +MI  +  + P+  T++ + 
Sbjct: 273 MSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVI 332

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GLC+ G ++QAF++ + + E     +  ++N+LI  L + + +  A +L+  M   GL 
Sbjct: 333 HGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLE 392

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD  TY  LI+G+CK   ++ A  +   M++   +P LV Y  ++  LC+   ++ A++ 
Sbjct: 393 PDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNF 452

Query: 522 LQASQRIGLLDAITYNTLING--YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                +   LD + Y+T+I+G     + K AE F     M + G+  + V Y++LIN   
Sbjct: 453 FDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEF--LKHMLDEGLIPDSVTYSMLINMFA 510

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G    A  ++K M   G +PD   + +L+  +      E+V+EL  +M    ++ D++
Sbjct: 511 NSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSK 570

Query: 640 TYNAIISPLLG 650
             + I + L+ 
Sbjct: 571 IISTIYTCLVA 581



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 223/483 (46%), Gaps = 60/483 (12%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSP-----LEFLEGLLDSYEICKATP---- 146
           S   ++  L   RR   A+ L+ + M A+ V P        + GL D+ ++ KA      
Sbjct: 115 SYTTLMRALCAERRTGQAVGLLRD-MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLRE 173

Query: 147 ----------AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
                      V+  L++   + G  E    V +++  +G    +  +   +  L +  +
Sbjct: 174 MCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGK 233

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           + +  ++  +M+  G   NV T+N++I ++CKE  ++EA+SL   ML+ G+  + V +N 
Sbjct: 234 VKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNT 293

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVL-PNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           +I     V +++ A+ L  +M  + G++++ PN VT N +I+G CK GR+  A ++R  M
Sbjct: 294 LITGLSGVLEMDEAMGLLEEM--IHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMM 351

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
            + G  CN+ T+  LI G  R    ++A+ L DEM   GL P++  Y+  I+       V
Sbjct: 352 AENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQV 411

Query: 376 EGALFVLSDMIDKHICP----------------------------------DHFTYSILT 401
           + A  +LS M    I P                                  D   YS + 
Sbjct: 412 DRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMI 471

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G CR    K A +    +L+E ++ D+ +Y++LIN    S +L AA+++L  M   G +
Sbjct: 472 HGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFV 531

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD+  + +LI GY   G+ E  +++   M   +   +  I ++I   L  +   +  K+L
Sbjct: 532 PDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN---NEGKAL 588

Query: 522 LQA 524
           LQ+
Sbjct: 589 LQS 591



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%)

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK-GGNIEGAVQVYENMKKVE 494
           +N L +   L  +  LLSS+     + D ++Y T++   C+ GG ++ A+ +   M   E
Sbjct: 53  LNRLLRLVPLPESPALLSSLPS---VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAH-E 108

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
            +P  V Y +++  LC +     A  LL+  Q  G+  D +TY TLI G      + +A 
Sbjct: 109 TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAV 168

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  EM   GI  N V Y+ L+   CK G ++   ++ + M   GI PD V YT L+   
Sbjct: 169 ELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSL 228

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +    ++  ++ D M+  G+ P+  TYN +I+ +  E S ++
Sbjct: 229 CREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKE 271


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 239/474 (50%), Gaps = 4/474 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   +++  N  ++    LN +G  + +  +++  G+  +  TF  +I  LC E K+ EA
Sbjct: 86  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L L+ +M+  G  PNVV +  +IN  C+VG+   A++L R    M   +  P+ V +  I
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS---MEQGNCQPDVVIYTSI 202

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+  CK  +V  A  +   M+  GI  ++ TY +L+         +    L ++MV   +
Sbjct: 203 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 262

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+ V++++ +  L  EG V  A  ++  MI + + PD  TY+ L  G C    + +A K
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 322

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           + + ++ +    D  SY  LIN  CK + +  A  L   M  +  IPD  TY TL+ G C
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
             G ++ A+ ++  M    + P+LV Y+ +++ LCK+  L+ A +LL+A +   L  D  
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQ 442

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN +I+G    G++  A  +FS + + G+  +   YNI+I+ LCK G   +A +L   M
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +   PD  TY T+   F +N      I+L ++M+  G S D  T   ++  L
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 230/465 (49%), Gaps = 4/465 (0%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           NNF S  +  N +      +  ++      ++  F  ++ ++ K       LSL  +M  
Sbjct: 25  NNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS 84

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G+ PNV   N++IN  C +  + FA  +  K+  +      P+  T   +I G C  G+
Sbjct: 85  FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQ---PDPTTFTTLIRGLCVEGK 141

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A  +   MI  G   NV TY TLI+G  + G++  A+RL   M +    P+ V+Y S
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I  L  +  V  A  + S M+ + I PD FTY+ L   LC     K    L NQ++   
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           ++ D   ++ +++ LCK   +  A +++  MI RG+ PD++TY TL+DG+C    ++ AV
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 321

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
           +V++ M +    P+++ Y ++ING CK   +D A  L +   R   + D  TYNTL++G 
Sbjct: 322 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G++ +A A+F EM   G   + V Y+IL++ LCK    ++A  L+K +    + PD 
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             Y  ++    +    E   +L  ++   G+ P   TYN +I  L
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 486



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 223/450 (49%), Gaps = 4/450 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +  P  F  L+R     G    A  +  K+  +G   ++  +   ++ L K+       +
Sbjct: 123 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 182

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L + M       +V  +  +I +LCK+ ++ EA +L+ +M+  GI P++  +  +++  C
Sbjct: 183 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 242

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            + + +    L  +M       +LP+ V  + +++  CK G+V  A EI   MI+ G++ 
Sbjct: 243 NLCEWKHVTTLLNQM---VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY TL+DG+      +EA+++ D MV++G  P+ + Y + I+       ++ A+++ 
Sbjct: 300 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 359

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  K   PD  TY+ L  GLC  G ++ A  L ++++    + D  +Y+IL++ LCK+
Sbjct: 360 EEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 419

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +L  A  LL ++    L PDI  Y  +IDG C+ G +E A  ++ N+      P++  Y
Sbjct: 420 CHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 479

Query: 503 NSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +I+GLCK   L+ A  L ++        D  TYNT+  G+  N +   A  +  EM  
Sbjct: 480 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 539

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELM 591
            G + +     +L+  L   G  Q +  LM
Sbjct: 540 RGFSADVSTTTLLVEMLSDDGLDQSSCFLM 569



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 189/399 (47%), Gaps = 38/399 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+    ++ +++ +  +      A+++  ++  +G S  I  + + +  L  L E     
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 251

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  +MV+   + +V  F+ V+ ALCKE K+ EA  +   M++ G+ P+VV +  +++  
Sbjct: 252 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 311

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C   +++ A+K+F  M V  G    P+ +++  +ING+CK+ +++ A  +   M +    
Sbjct: 312 CLQSEMDEAVKVFDMM-VRKG--FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI 368

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            + +TY TL+ G    G  ++A+ L  EMV RG MP                        
Sbjct: 369 PDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMP------------------------ 404

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
                      D  TYSIL   LC+N  +++A  L   +   ++  D   YNI+I+ +C+
Sbjct: 405 -----------DLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCR 453

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  L AA+ L S++  +GL P + TY  +I G CK G +  A +++  M   +  P+   
Sbjct: 454 AGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCT 513

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLI 540
           YN+I  G  ++     A  LL+     G    ++  TL+
Sbjct: 514 YNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLL 552



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 134/272 (49%), Gaps = 7/272 (2%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V   +  KG +  + ++   ++   K+++I +   L++EM    ++ +  T+N +++
Sbjct: 320 AVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMH 379

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   +L++A++L++ M+  G  P++V ++++++  C+   LE A+ L +    +   +
Sbjct: 380 GLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK---AIEASN 436

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P+   +N II+G C+ G +E A ++   +   G+  +V TY  +I G  + G   EA 
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 496

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L  EM      P+   YN+         +   A+ +L +M+ +    D  T ++L + L
Sbjct: 497 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
             +G  + +  L   VL E    D   Y I I
Sbjct: 557 SDDGLDQSSCFLMLSVLSE----DDRRYFIFI 584



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 1/243 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A    N++L  H       +  L+  + K  + +    L + M   G+ P++ T   
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+ +C    +  A  V   + K+  +P+   + ++I GLC +  +  A  L       G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              + +TY TLING    G  + A  +   M       + V Y  +I+ LCK     +A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   M+  GI PD  TYT+LV      C  + V  L + MV S + PD   ++ ++  L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 649 LGE 651
             E
Sbjct: 277 CKE 279


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 181/670 (27%), Positives = 298/670 (44%), Gaps = 104/670 (15%)

Query: 56  PSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI---------VHLLVN 106
           P++ +++V  +    R      L     V  ++  SH L SS  I           L  +
Sbjct: 39  PTVASAVVTPISDRLR-----VLRSLHAVAPDHLLSHPLPSSAHICLAAHLAARARLFAH 93

Query: 107 WRRFDDALLLMGNL--MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
            RR    LL  G+   ++A+ V  L      L  +    A P+VFD L+      G  + 
Sbjct: 94  SRRLLSRLLGAGHRPHLAASLVDILHRAALALGPHR--SALPSVFDTLLSLLADHGLLDD 151

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A   + +++      +    N+ L  L +  + G   +L++ + +     NV TFN+VI 
Sbjct: 152 AVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----PNVFTFNIVID 207

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE---FALKLFRKMGVMS 281
            LCK+ +L EA +L+ RM   G  P+VV +N +I+   + G+LE     +   RK G  +
Sbjct: 208 FLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAA 267

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
                 + VT+N +IN F K G +E A      M + G+  NV T +T +D + + G   
Sbjct: 268 ------DVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA++L  +M  RG+MPN   Y S +      G ++ A+ +L +M+ + + P+  TY+++ 
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 402 KGLCRNGCV-----------------------------------KQAFKLHNQVLEEHMV 426
            GLC+ G V                                   ++A  L N++  + M 
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSM------------------------------- 455
            D   Y  LI  LCK   L  AK LL  M                               
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 456 ----IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
                  GL P+++TY  LIDG CK G+I  A+  ++ M+++   PN+ +Y ++I+G CK
Sbjct: 502 LHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCK 561

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             SL  A  L+      G+ LD + Y +LI+G+   G +  AFA+ ++M   G+ ++   
Sbjct: 562 IGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYC 621

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM- 629
           Y   I+  C     Q+AR ++  MI  GI PD   Y  L+ ++ K  + EE   L ++M 
Sbjct: 622 YTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEME 681

Query: 630 -VLSGVSPDN 638
            VLS  + ++
Sbjct: 682 SVLSSCTEED 691



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 217/409 (53%), Gaps = 4/409 (0%)

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L  R+ +    PNV  FN++I+  C+ G+L  A  LF +M  M      P+ VT+N +I+
Sbjct: 186 LVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCS---PDVVTYNSLID 242

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G+ K G +E  E +   M K+G   +V TY  LI+ +++ G  E+A     EM + G+M 
Sbjct: 243 GYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMA 302

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V  ++ +     EG V  A+ + + M  + + P+ FTY+ L  G C+ G +  A  L 
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLL 362

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           ++++ + +V +  +Y ++++ LCK   +A A  +LS M   G+  + + Y TLI G+   
Sbjct: 363 DEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN 422

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
            N E A+ +   MK    + ++ +Y ++I GLCK   LD AKSLL      GL  + + Y
Sbjct: 423 KNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIY 482

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            T+++ +F  GK +EA A+  ++ + G+  N V Y  LI+ LCK G   +A      M  
Sbjct: 483 TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRE 542

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            G+ P+   YTTL+  F K  S  + + L ++MV  G+S D   Y ++I
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLI 591



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 194/433 (44%), Gaps = 43/433 (9%)

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
           + F+ ++  L     L++A+    R+ +  + PN    N I+    +        +LF  
Sbjct: 134 SVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEH 193

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +         PN  T N +I+  CK G +  A  +   M   G   +V TY +LIDGY +
Sbjct: 194 LPA-------PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 246

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G  EE   L  EM K G   + V YN+ I+     G +E A     +M    +  +  T
Sbjct: 247 CGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVT 306

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
            S      C+ G V++A K                                   L + M 
Sbjct: 307 LSTFVDAFCKEGLVREAMK-----------------------------------LFAQMR 331

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
           VRG++P+  TY +L+DG CK G ++ A+ + + M      PN+V Y  +++GLCK+  + 
Sbjct: 332 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVA 391

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  +L   +R G+  + + Y TLI+G+F+N     A  + +EM+N G+ ++   Y  LI
Sbjct: 392 VADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLI 451

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
             LCK     +A+ L+  M   G+ P+ V YTT++  F K     E + L   +  SG+ 
Sbjct: 452 WGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQ 511

Query: 636 PDNQTYNAIISPL 648
           P+  TY A+I  L
Sbjct: 512 PNVVTYCALIDGL 524



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 157/312 (50%), Gaps = 23/312 (7%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN---GC 409
           R  +P+  V+++ +  L   G ++ A+  L+ +    + P+  T + +   L RN   G 
Sbjct: 129 RSALPS--VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGL 186

Query: 410 VKQAFKLHNQVLEEHMVG-DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           V++ F        EH+   + +++NI+I++LCK   L  A+ L   M   G  PD++TY 
Sbjct: 187 VRRLF--------EHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYN 238

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +LIDGY K G +E    +   M+K     ++V YN++IN   K   ++ A S     +R+
Sbjct: 239 SLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRL 298

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G++ + +T +T ++ +   G + EA  +F++MR  G+  N+  Y  L++  CK G    A
Sbjct: 299 GVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 358

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD----MVLSGVSPDNQTYNA 643
             L+  M+  G++P+ VTYT +V    K    E  + + DD    M  +GV  +   Y  
Sbjct: 359 IVLLDEMVHQGLVPNVVTYTVMVDGLCK----EGKVAVADDVLSLMERAGVKANELLYTT 414

Query: 644 IISPLLGEKSAE 655
           +I      K++E
Sbjct: 415 LIHGHFMNKNSE 426


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 263/496 (53%), Gaps = 4/496 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+ A  + G  E A  + ++LK    +  + +++  ++ L +  +     ++  EM
Sbjct: 11  TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G   N+ T+N ++  L K  + +EAL L   M  +G  P+V  +N +I+   + G L
Sbjct: 71  QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  LF +M        +P++ T+N +I G  K+GR + A E+   M + G   +V TY
Sbjct: 131 SEAFTLFAEM---RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           ++LI G  + G + +A +L  EM +RG  P+++ + + +  L   G V+ AL +L +M +
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P   TY+ L  G  + G + +A+ L +++       D  +Y+ LI  L K++ L  
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A Q+L  M   G  PD ITY TLI+G  K G +  A ++++ MK     P++V Y+++I 
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L K A +++A  L +  + +G+  D  TY ++I      G++ +A  +FSEMR  G++ 
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + + YN  +N L + G +++AR++ + M   G++PD  TY  L+   SK    ++   L 
Sbjct: 428 DVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLL 487

Query: 627 DDMVLSGVSPDNQTYN 642
            +++  G + D+  ++
Sbjct: 488 KELIEQGCAFDSLKFD 503



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 236/480 (49%), Gaps = 4/480 (0%)

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S ++  +N+ L+ L K  +      L++E+ +  +  +V +++ +I +L +  K E AL 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           +   M   G  PN+  +N +++   + G  + AL+L  +M     +  +P+  T+NC+I+
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM---RDNGCVPDVRTYNCLIS 122

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
              K GR+  A  +   M + G   +  TY +LI G  + G S++A+ L +EM + G  P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + + Y+S I  L  +G+   A  +  +M  +   PD  T++ L   L + G V  A +L 
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++ E  +     +YN LI    K  +L  A  LL  M   G  PD++TY  LI G  K 
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
             ++ A QV + M+K    P+ + YN++INGL K   L+ A  L    +  G   D +TY
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           +TLI       ++  A  +F EM +VGI  +   Y  +I  L K G    A  L   M  
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G+ PD +TY   +    +    +E  ++ +DM  SG+ PD  TY+A++  L   K  +D
Sbjct: 423 KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDD 482



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 243/508 (47%), Gaps = 4/508 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     ++ LV    + G  + A  ++ +++  G    +  +N  +S L K   +   +
Sbjct: 75  CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM   G V +  T+N +IY L K  + ++A+ L   M + G  P+V+ ++ +I   
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G+   A KLF++M         P+S+T   +++   K GRV+ A E+   M + G+ 
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRK---PDSITFTALMDALGKAGRVDDALELLDEMKERGVK 251

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             V TY  LI G+ + G   EA  L DEM + G  P+ V Y+  I  L     ++ A  V
Sbjct: 252 PGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQV 311

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M  +   PD  TY+ L  GL + G +  A +L +++  +    D  +Y+ LI  L K
Sbjct: 312 LKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGK 371

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  + +A  L   M   G+ PD+ TY ++I    K G ++ A +++  M+     P+++ 
Sbjct: 372 AARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVIT 431

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN+ +N L +      A+ + +  +  GLL D  TY+ L+ G     ++ +A  +  E+ 
Sbjct: 432 YNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELI 491

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G A + + ++  +  L  +G   +A EL++     G+ P   +Y  L+   +K     
Sbjct: 492 EQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVS 551

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
           E     +D+   G  PD  +Y+++IS L
Sbjct: 552 EAFNTLEDLKEQGGKPDIVSYSSLISAL 579



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 262/584 (44%), Gaps = 70/584 (11%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L +  +  K TP V  +  L+ +  + G  E A +V+ +++ KG   ++  +N  +  L 
Sbjct: 31  LFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLG 90

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  +     +L  EM   G V +V T+N +I  L K  +L EA +L+  M + G  P+  
Sbjct: 91  KAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTF 150

Query: 253 CFNMIINEACQVGDLEFALKLFRKM-------GVMSGDSVL------------------- 286
            +N +I    +VG  + A++L  +M        VM+  S++                   
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210

Query: 287 ------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
                 P+S+T   +++   K GRV+ A E+   M + G+   V TY  LI G+ + G  
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL 270

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
            EA  L DEM + G  P+ V Y+  I  L     ++ A  VL  M  +   PD  TY+ L
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330

Query: 401 TKGLCRNGCVKQAFKLHNQ------------------------------VLEEHM--VG- 427
             GL + G +  A +L ++                              VL E M  VG 
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 428 --DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D ++Y  +I  L K+  +  A +L S M  +GL PD+ITY   ++   +GG  + A +
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYF 544
           ++E+MK+    P++  Y++++ GL K   +D A  LL+     G   D++ ++  +    
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G + EA  +     + G+      YN LI+ L K G   +A   ++ +   G  PD V
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIV 570

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +Y++L++   +    +   EL ++M   G+    ++Y+ ++  L
Sbjct: 571 SYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 246/484 (50%), Gaps = 4/484 (0%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A D+ Q++       S+  ++ F S +    +        K+M   G   N+ T N++
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I   C+ CK   A S+  +++K G  P+   FN +IN  C    +  A+ L  +M V +G
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARM-VENG 165

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               PN VT+N I+NG CK G    A ++   M +  +  +V TY+T+ID   R G  + 
Sbjct: 166 --CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDA 223

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+ L  EM  +G+  + V YNS +  L   G     + +L DM  + I P+  T+++L  
Sbjct: 224 AISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
              + G +++A +L+ +++ + +  +  +YN L++  C  N L+ A  +L  M+     P
Sbjct: 284 VFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSP 343

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           DI+T+ +LI GYCK   ++  ++++  + K     N V Y+ ++ G C+   L+ A+ L 
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           Q    +G+L D +TY  L++G   NGK+ +A  +F +++   + ++ V Y I+I  +CK 
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  + A  L   +   G+ P+ +TYT +++   K  S  E   L   M   G  P++ TY
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTY 523

Query: 642 NAII 645
           N +I
Sbjct: 524 NTLI 527



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 246/483 (50%), Gaps = 4/483 (0%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D  +K+++ G + +I+  N  ++   +  +    + +  +++  GY  +  TFN +I  L
Sbjct: 86  DFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGL 145

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C E K+ EA+ L  RM+++G  PNVV +N I+N  C+ GD   AL L RKM      +V 
Sbjct: 146 CLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM---DERNVK 202

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            +  T++ II+  C+ G ++ A  +   M   GI  ++ TY +L+ G  + G   + ++L
Sbjct: 203 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQL 262

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +M  R ++PN + +N  I     EG ++ A  +  +MI K I P+  TY+ L  G C 
Sbjct: 263 LKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCM 322

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
              + +A  + + ++  +   D  ++  LI   CK   +    +L   +  RGL+ + +T
Sbjct: 323 QNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  L+ G+C+ G +E A ++++ M  +   P+++ Y  +++GLC +  L+ A  + +  Q
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 442

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +  + LD + Y  +I G    GK+ +A+ +F  +   G+  N + Y ++I+ LCK G   
Sbjct: 443 KSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 502

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L++ M   G  P+  TY TL+    ++       +L ++M   G S D  +   +I
Sbjct: 503 EANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562

Query: 646 SPL 648
             L
Sbjct: 563 DML 565



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 215/427 (50%), Gaps = 4/427 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K ++A+ L+  M++S   P++V F+   +           L   +KM +   + +  N  
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMEL---NGIAHNIY 101

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +IN FC+  +  FA  +   ++K G + +  T+ TLI+G        EA+ L   M
Sbjct: 102 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARM 161

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ G  PN V YNS ++ +   GD   AL +L  M ++++  D FTYS +   LCR+GC+
Sbjct: 162 VENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCI 221

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A  L  ++  + +     +YN L+  LCK+       QLL  M  R +IP++IT+  L
Sbjct: 222 DAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ID + K G ++ A ++Y+ M      PN + YNS+++G C    L  A ++L    R   
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D +T+ +LI GY    ++ E   +F ++   G+  N V Y+IL+   C+ G  + A E
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L + M+  G++PD +TY  L+     N   E+ +E+ +D+  S ++ D   Y  II  + 
Sbjct: 402 LFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461

Query: 650 GEKSAED 656
                ED
Sbjct: 462 KGGKVED 468



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 207/401 (51%), Gaps = 4/401 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++++V    + G T  A D+++K+  +     +  ++  +  L +   I    
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   ++ T+N ++  LCK  K  + + L   M    I PNV+ FN++I+  
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L+ A +L+++M +  G S  PN++T+N +++G+C   R+  A  +   M++    
Sbjct: 286 VKEGKLQEANELYKEM-ITKGIS--PNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ T+ +LI GY +    +E ++L  ++ KRGL+ N V Y+  +      G +E A  +
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + PD  TY IL  GLC NG +++A ++   + +  M  D   Y I+I  +CK
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCK 462

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  L  S+  +G+ P+++TY  +I G CK G++  A  +   M++   +PN   
Sbjct: 463 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCT 522

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           YN++I    +D  L A+  L++  +  G   DA +   +I+
Sbjct: 523 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 217/433 (50%), Gaps = 4/433 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F+ L+           A  ++ ++   G   ++  +N+ ++ + K  +      L ++
Sbjct: 136 TTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRK 195

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V T++ +I +LC++  ++ A+SL+  M   GI  ++V +N ++   C+ G 
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
               ++L +    M+   ++PN +T N +I+ F K G+++ A E+   MI  GI  N  T
Sbjct: 256 WNDGVQLLKD---MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +L+DGY       EA  + D MV+    P+ V + S I        V+  + +   + 
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + +  +  TYSIL +G C++G ++ A +L  +++   ++ D  +Y IL++ LC +  L 
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLE 432

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++   +    +  DI+ Y  +I+G CKGG +E A  ++ ++     KPN++ Y  +I
Sbjct: 433 KALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 492

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK  SL  A  LL+  +  G   +  TYNTLI  +  +G +  +  +  EM++ G +
Sbjct: 493 SGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 552

Query: 566 VNKVGYNILINFL 578
            +     ++I+ L
Sbjct: 553 ADASSIKMVIDML 565


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 240/486 (49%), Gaps = 51/486 (10%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +++  G   N NTFN++I   C E KL EA+ L  +M     +P+ V +N I++  C
Sbjct: 35  IFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLC 94

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G L  A  L   M     + + PN  T N +++G+CKLG ++ A E+   M +  +  
Sbjct: 95  KKGKLNEARDLLLDM---KNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLP 151

Query: 323 NVRTYATLIDGYARGGSSEEALRL-----------------------------------C 347
           +VRTY TLI G  + G  +EA RL                                    
Sbjct: 152 DVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELI 211

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           DEM  +G+ PN V YN  + W   EG ++ A   L  M +    PD  T++ L+ G C+ 
Sbjct: 212 DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKA 271

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + +AF++ +++  + +  ++ + N +++ LC    L  A +LLSS   RG   D ++Y
Sbjct: 272 GRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSY 331

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK----DASLDAAKSLLQ 523
           GTLI GY K     G    ++ MK+ E  P+++ Y ++I GLC+    D S+D    LL+
Sbjct: 332 GTLIMGYFK----VGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLE 387

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           +    GL+ D  TYNT+I GY   G++ +AF   ++M       +    NIL+  LC  G
Sbjct: 388 S----GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEG 443

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A +L K  I  G   D VT+ T+++   +    EE  +L  +M    + PD  T+N
Sbjct: 444 MLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHN 503

Query: 643 AIISPL 648
           AI+S L
Sbjct: 504 AILSAL 509



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 212/456 (46%), Gaps = 43/456 (9%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV-------------------- 222
           ++N  L  L K  ++     L  +M + G   N NTFN++                    
Sbjct: 85  SYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIM 144

Query: 223 ---------------IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                          I  LCK+ K++EA  L   M    + P+VV +NM+IN   +    
Sbjct: 145 ARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSS- 203

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             +LK F  +  M G  V PN+VT+N ++  + K G+++ A      M ++G   +  T+
Sbjct: 204 --SLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 261

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL +GY + G   EA R+ DEM ++GL  N+V  N+ +H L  E  ++ A  +LS    
Sbjct: 262 NTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 321

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +    D  +Y  L  G  + G         +++ E+ ++    +Y  +I  LC+S     
Sbjct: 322 RGYFVDEVSYGTLIMGYFKVG----KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQ 377

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           +    + ++  GL+PD  TY T+I GYC+ G ++ A      M K   KP+L   N ++ 
Sbjct: 378 SIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVR 437

Query: 508 GLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC +  LD A  L +     G  +DA+T+NT+I+G    G+  EAF + +EM    +  
Sbjct: 438 GLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGP 497

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           +   +N +++ L   G  ++A E M  ++  G + D
Sbjct: 498 DCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQD 533



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 239/524 (45%), Gaps = 58/524 (11%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++    + G    A D++  +K  G   + + +N  +S   KL  +    
Sbjct: 79  CFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAA 138

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++   M     + +V T+  +I  LCK+ K++EA  L   M    + P+VV +NM+IN  
Sbjct: 139 EVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGC 198

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            +      +LK F  +  M G  V PN+VT+N ++  + K G+++ A      M ++G  
Sbjct: 199 FECSS---SLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 255

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T+ TL +GY + G   EA R+ DEM ++GL  N+V  N+ +H L  E  ++ A  +
Sbjct: 256 PDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 315

Query: 382 LS-------------------------------DMIDKHICPDHFTYSILTKGLCRNGCV 410
           LS                               +M +K I P   TY  +  GLCR+G  
Sbjct: 316 LSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            Q+    N++LE  +V D  +YN +I   C+   +  A    + M+ +   PD+ T   L
Sbjct: 376 DQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNIL 435

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           + G C  G ++ A+++++      K  + V +N+II+GLC++   + A  LL   +   L
Sbjct: 436 VRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKL 495

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFS------EMRNVGIAVNK--------------- 568
             D  T+N +++     G++ EA    S      ++++  I++NK               
Sbjct: 496 GPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDP 555

Query: 569 --VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             V ++  IN LC  G Y+ A  +++     GII    TY +L+
Sbjct: 556 NSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLM 599



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 218/441 (49%), Gaps = 11/441 (2%)

Query: 215 NVNTFNLVIYALCK---ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           N+ T N +I AL +   +  +  + +++  ++K G+  N   FN++I   C    L  A+
Sbjct: 9   NLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAI 68

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            L   +G M   S  P++V++N I++  CK G++  A ++   M   G+  N  T+  L+
Sbjct: 69  GL---IGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            GY + G  +EA  + D M +  ++P+   Y + I  L  +G ++ A  +  +M +  + 
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P   TY++L  G        + F+L +++  + +  +A +YN+++ +  K   +  A   
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M   G  PD +T+ TL +GYCK G +  A ++ + M +   K N V  N+I++ LC 
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 305

Query: 512 DASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  LD A  LL  AS+R   +D ++Y TLI GYF  GK       + EM+   I  + + 
Sbjct: 306 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIIT 361

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  +I  LC+ G   Q+ +    ++  G++PD  TY T++  + +    ++     + MV
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421

Query: 631 LSGVSPDNQTYNAIISPLLGE 651
                PD  T N ++  L  E
Sbjct: 422 KKSFKPDLFTCNILVRGLCTE 442



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 196/434 (45%), Gaps = 33/434 (7%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           L D  E  K  P V  ++ L+  C +  ++   +++I +++ KG   +   +N  +   V
Sbjct: 175 LRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYV 234

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  ++       ++M   G+  +  TFN +    CK  +L EA  +   M + G+  N V
Sbjct: 235 KEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSV 294

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             N I++  C    L+ A KL   +   S      + V++  +I G+ K+G+    +E++
Sbjct: 295 TLNTILHTLCGERKLDDAYKL---LSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMK 351

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
              I   I     TY T+I G  R G +++++  C+E+++ GL+P+   YN+ I     E
Sbjct: 352 EKEIIPSI----ITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCRE 407

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G V+ A    + M+ K   PD FT +IL +GLC  G + +A KL    + +    DA ++
Sbjct: 408 GQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTF 467

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N +I+ LC+      A  LL+ M  + L PD  T+  ++      G ++ A +    + +
Sbjct: 468 NTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVE 527

Query: 493 VEK-----------------------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
             K                        PN V ++  IN LC       A  ++Q S + G
Sbjct: 528 QGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKG 587

Query: 530 -LLDAITYNTLING 542
            +L   TY +L+ G
Sbjct: 588 IILHKSTYISLMEG 601



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 150/311 (48%), Gaps = 4/311 (1%)

Query: 350 MVKRGLMPNNVVYNSTIHWLF---AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
           M +  L PN +  N+ I  L    ++  V  +  + SD+I   +  +  T++IL  G C 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
              + +A  L  ++       D  SYN +++ LCK   L  A+ LL  M   GL P+  T
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  L+ GYCK G ++ A +V + M +    P++  Y ++I GLCKD  +D A  L    +
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 527 RIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            + LL   +TYN LING F      + F +  EM   G+  N V YN+++ +  K G   
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMD 240

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A   ++ M   G  PD VT+ TL   + K     E   + D+M   G+  ++ T N I+
Sbjct: 241 NAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTIL 300

Query: 646 SPLLGEKSAED 656
             L GE+  +D
Sbjct: 301 HTLCGERKLDD 311



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 57/388 (14%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     ++ +V+   + G  + A + ++K++  G S     +N   +   K   +   ++
Sbjct: 220 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFR 279

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL----------------------YY 240
           +  EM   G   N  T N +++ LC E KL++A  L                      Y+
Sbjct: 280 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF 339

Query: 241 RMLKSGIW---------PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++ KS  W         P+++ +  +I   C+ G  + ++    K   +    ++P+  T
Sbjct: 340 KVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSID---KCNELLESGLVPDQTT 396

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N II G+C+ G+V+ A   R  M+K     ++ T   L+ G    G  ++AL+L    +
Sbjct: 397 YNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWI 456

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +G   + V +N+ I  L  EG  E A  +L++M +K + PD +T++ +   L   G +K
Sbjct: 457 SKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMK 516

Query: 412 QAFKLHNQVLEEHMVGD-----------------------AYSYNILINYLCKSNNLAAA 448
           +A +  + ++E+  + D                       + +++  IN LC       A
Sbjct: 517 EAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDA 576

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++     +G+I    TY +L++G  K
Sbjct: 577 MHMIQESTQKGIILHKSTYISLMEGLIK 604


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 252/499 (50%), Gaps = 17/499 (3%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-LYKEMVSCGYVENV 216
           +IG  E  +     +   G  V     N  L  L     +G     L ++M   G    V
Sbjct: 96  RIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGV 155

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLK---SGIWPNVVCFNMIINEACQVGDLEFALKL 273
            ++N ++  LC   + EEA  L + M+    S   P+VV +N++IN     G ++ A  L
Sbjct: 156 VSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSL 215

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F +MGV       P+ VT+N II+G CK   V+ AE++   M++ G+  N  TY T+IDG
Sbjct: 216 FLEMGVS------PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDG 269

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             +    + A  +  +MV +G+ P+NV YN+ I  L     V+ A  V   MID+ + PD
Sbjct: 270 LCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPD 329

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
           H TY+ +  GLC+   + +A  +  Q++++ +  D  +Y I+I+ LCK+ ++  A+ +  
Sbjct: 330 HVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQ 389

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            MI +G+ P+  TY  LI GY   G  E  VQ  + M   + +P++  Y  +++ LCK+ 
Sbjct: 390 QMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNG 449

Query: 514 SLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
             + A+SL  +  R G+  ++T Y  +++GY   G ++E   + + M   GI+ N   +N
Sbjct: 450 KCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFN 509

Query: 573 ILINFLCKFGCYQQARELMKVMI---LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            +I   C +       E+M + I     G+ P+ VTY TL+    K    ++ +   + M
Sbjct: 510 TVI---CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566

Query: 630 VLSGVSPDNQTYNAIISPL 648
           +  GV+P+N  +N+++  L
Sbjct: 567 INEGVTPNNVVFNSLVYGL 585



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 273/581 (46%), Gaps = 78/581 (13%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            + D L +A  ++   EG   V QK+  KG   S   +N  +  L K   + R   ++++
Sbjct: 265 TIIDGLCKA-QEVDMAEG---VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   +  T+N +I  LCK   +++A  ++ +M+  G+ P+ + + +II+  C+   
Sbjct: 321 MIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQS 380

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF--------------------------- 299
           ++ A  +F++M       V PN+ T+NC+I+G+                           
Sbjct: 381 VDRAEGVFQQM---IDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437

Query: 300 --------CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
                   CK G+   A  +  +MI+ GI  +V  Y  ++ GY + G+  E   L + MV
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497

Query: 352 -----------------------------------KRGLMPNNVVYNSTIHWLFAEGDVE 376
                                              ++GL PN V Y + I  L   G V+
Sbjct: 498 ANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A+   + MI++ + P++  ++ L  GLC     ++  +L  ++L + +  D   +N ++
Sbjct: 558 DAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVL 617

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LCK   +  A++L+ SM+  GL PD+I+Y TLIDG+C    ++ AV++ + M     K
Sbjct: 618 CNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLK 677

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAM 555
           PN+V YN++++G CK   +D A  L +   R G+   + TYNT++NG F +G+ +EA  +
Sbjct: 678 PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           +  M       +   Y+I+++  CK  C+ +A ++ + +    +  D +T+  ++    K
Sbjct: 738 YVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               E+ ++L   +  +G+ P   TY  I   L+ E S E+
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 225/441 (51%), Gaps = 5/441 (1%)

Query: 220 NLVIYALCKECKLEEALSLYYR-MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           N ++  LC   ++ EA+ +  R M + G    VV +N ++   C     E A +L   M 
Sbjct: 123 NQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMV 182

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                S  P+ V++N +INGF   G+V+ A  +    ++ G+  +V TY T+IDG  +  
Sbjct: 183 DGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQ 239

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             + A  +  +MV++G+ PNNV YN+ I  L    +V+ A  V   M+DK + P + TY+
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            +  GLC+   V +A  +  Q+++  +  D  +YN +I+ LCK+  +  A+ +   MI +
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING-LCKDASLDA 517
           G+ PD +TY  +IDG CK  +++ A  V++ M     KPN   YN +I+G L      + 
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            + + + S      D  TY  L++    NGK  EA ++F  M   GI  +   Y I+++ 
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
             K G   +  +L+ +M+ +GI P++  + T++  ++K    +EV+ +   M   G+SP+
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539

Query: 638 NQTYNAIISPLLGEKSAEDQV 658
             TY  +I  L      +D V
Sbjct: 540 VVTYGTLIDALCKLGRVDDAV 560



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 249/496 (50%), Gaps = 25/496 (5%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN-------EIGRFWKLYKEMVSCGYVENVN 217
           A  +  +L +     S+ A N  LS + +          + RF ++ ++  S     +  
Sbjct: 27  ALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRD-CSNKVAPDCC 85

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC---QVGD-LEFALKL 273
           T+++VI   C+  +LE   + +  +LK+G   + +  N ++   C   +VG+ +   L+ 
Sbjct: 86  TYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQ 145

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI---KAGIDCNVRTYATL 330
             ++G   G       V++N ++ G C   R E A E+ + M+    +    +V +Y  +
Sbjct: 146 MPEVGCRLG------VVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I+G+   G  ++A  L  EM   G+ P+ V YN+ I  L    +V+ A  V   M++K +
Sbjct: 200 INGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV 256

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P++ TY+ +  GLC+   V  A  +  +++++ +     +YN +I+ LCK+  +  A+ 
Sbjct: 257 KPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEG 316

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   MI RG+ PD +TY T+IDG CK   I+ A  V++ M     KP+ + Y  II+GLC
Sbjct: 317 VFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K  S+D A+ + Q     G+  +  TYN LI+GY   G+  E      EM    +  +  
Sbjct: 377 KAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVF 436

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y +L+++LCK G   +AR L   MI  GI P    Y  ++  + K  +  E+ +L + M
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLM 496

Query: 630 VLSGVSPDNQTYNAII 645
           V +G+SP+++ +N +I
Sbjct: 497 VANGISPNHRIFNTVI 512



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 132/490 (26%), Positives = 231/490 (47%), Gaps = 23/490 (4%)

Query: 121 MSANSVSPLEFLEGLLDSY----EICKATPAVFDALVRACTQI---------------GA 161
           MSA+ + P  F  GLL  Y      C    ++FD+++R   +                GA
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
               +D++  +   G S +   +N  +    K   I     ++ +M   G   NV T+  
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I ALCK  ++++A+  + +M+  G+ PN V FN ++   C V   E   +LF +M    
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM---L 602

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              + P+ V  N ++   CK GRV  A  +  +M+  G+  +V +Y TLIDG+      +
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA++L D MV  GL PN V YN+ +H     G ++ A  +  +M+ K + P   TY+ + 
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GL R+G   +A +L+  +++   +    +Y+I+++  CK+N    A ++  S+    L 
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
            DIIT+  +IDG  KGG  E A+ ++  +      P++V Y  I   L ++ SL+    L
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCL 842

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
               ++ G   ++   N LI      G+I  A A  S++     ++     ++LI+   +
Sbjct: 843 FSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902

Query: 581 FGCYQQAREL 590
               Q A+ L
Sbjct: 903 EEYQQHAKSL 912



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 200/435 (45%), Gaps = 46/435 (10%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNM---IINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           L +AL L+  +L      +V   N    +++ A      + A+  F +M     + V P+
Sbjct: 24  LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T++ +I  FC++GR+E                          G+A  G          
Sbjct: 84  CCTYSIVIGCFCRIGRLEL-------------------------GFAAFGL--------- 109

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP-DHFTYSILTKGLCRN 407
            ++K G   +++V N  +  L     V  A+ VL   + +  C     +Y+ L KGLC  
Sbjct: 110 -ILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDR 168

Query: 408 GCVKQAFKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
              ++A +L + +++        D  SYNI+IN       +  A  L   M   G+ PD+
Sbjct: 169 RRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDV 225

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY T+IDG CK   ++ A  V++ M +   KPN V YN+II+GLCK   +D A+ + Q 
Sbjct: 226 VTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQK 285

Query: 525 SQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G+  + +TYNT+I+G      +  A  +F +M + G+  + V YN +I+ LCK   
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA 345

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A  + + MI  G+ PD +TYT ++    K  S +    +   M+  GV P+N TYN 
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405

Query: 644 IISPLLGEKSAEDQV 658
           +I   L     E+ V
Sbjct: 406 LIHGYLSTGQWEEVV 420


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 248/514 (48%), Gaps = 35/514 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+ +      L ++M   G   N+ T+N++I   C+  ++  AL+L 
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
            +M+K G  P++V  + ++N  C    +  A+ L  +M  M    D++            
Sbjct: 69  GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128

Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                              PN VT+  ++NG CK G ++ A  +   M  A I+ +V  +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID   +    ++AL L  EM  +G+ PN V Y+S I  L + G    A  +LSDMI+
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I P+  T++ L     + G   +A KLH+ +++  +  D ++YN LIN  C  + L  
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AKQ+   M+ +   PD+ TY TLI G+CK   +E   +++  M       + V Y ++I 
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL  D   D A+ + +     G+  D +TY+ L++G   NGK+ +A  +F  M+   I +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y  +I  +CK G      +L   + L G+ P+ VTY T+++        +E   L 
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488

Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
             M   G  PD+ TYN +I   L  G+K+A  ++
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 258/535 (48%), Gaps = 26/535 (4%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNR---FSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
           N+++S   K  K  L     +GE  +    SH+L +   +++      +   AL L+G +
Sbjct: 14  NKLLSAIAKMKKFDL--VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71

Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
           M       +  L  LL+ Y  C     + DA+               ++ ++   G+   
Sbjct: 72  MKLGYEPSIVTLSSLLNGY--CHG-KRISDAVA--------------LVDQMVEMGYRPD 114

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
              +   +  L   N+      L   MV  G   N+ T+ +V+  LCK   ++ A +L  
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           +M  + I  +VV FN II+  C+   ++ AL LF++M       + PN VT++ +I+  C
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM---ETKGIRPNVVTYSSLISCLC 231

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
             GR   A ++   MI+  I+ N+ T+  LID + + G   EA +L D+M+KR + P+  
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YNS I+       ++ A  +   M+ K   PD  TY+ L KG C++  V+   +L  ++
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
               +VGD  +Y  LI  L    +   A+++   M+  G+ PDI+TY  L+DG C  G +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           E A++V++ M+K E K ++ IY ++I G+CK   +D    L  +    G+  + +TYNT+
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           I+G      + EA+A+  +M+  G   +   YN LI    + G    + EL++ M
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 226/451 (50%), Gaps = 4/451 (0%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV    + ++  FN ++ A+ K  K +  +SL  +M + GI  N+  +N++IN  C+   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  AL L  KM  +  +   P+ VT + ++NG+C   R+  A  +   M++ G   +  T
Sbjct: 61  ISLALALLGKMMKLGYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + TLI G      + EA+ L D MV+RG  PN V Y   ++ L   GD++ A  +L+ M 
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I  D   ++ +   LC+   V  A  L  ++  + +  +  +Y+ LI+ LC     +
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A QLLS MI + + P+++T+  LID + K G    A +++++M K    P++  YNS+I
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 507 NGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NG C    LD AK + +    +    D  TYNTLI G+  + ++ +   +F EM + G+ 
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + V Y  LI  L   G    A+++ K M+  G+ PD +TY+ L+     N   E+ +E+
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            D M  S +  D   Y  +I  +      +D
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 203/412 (49%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A++++ K++       +  +N  +  L K   +    
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I PN+V FN +I+  
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G    A KL   M   S D   P+  T+N +INGFC   R++ A+++   M+     
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSID---PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY TLI G+ +    E+   L  EM  RGL+ + V Y + I  LF +GD + A  V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC NG +++A ++ + + +  +  D Y Y  +I  +CK
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P+++TY T+I G C    ++ A  + + MK+    P+   
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +    +   +   L+     +G++ ++F
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 554


>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
 gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 237/470 (50%), Gaps = 5/470 (1%)

Query: 24  KQFANPSTEDIVF-RAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYT 82
           +    P  +D+ F   +  +L    W  L +++   T   VN ++ + +K   L+LEF+ 
Sbjct: 5   RTIPEPKGQDLDFVNVVHSHLIHSDWDKLNKLSTHFTPFRVNHILLKIQKDHVLSLEFFN 64

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS-PLEFLEGLLDSYEI 141
            +   N  S +LE+   I+H+L    +F  A  ++  L+++ S+  P +  + LL SY +
Sbjct: 65  SLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSYRM 124

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C ++P VFD+L +    +     A DV  ++K  G   ++ + N +LS L+  + +    
Sbjct: 125 CDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIAL 184

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             Y+EM  C    N  TFNLV+ ALCK  KLE+A+ +   M   GI PNVV +N +I   
Sbjct: 185 TFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGH 244

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G L  A KL   MG    + + PN VT N +I+GFCK G++  A      M    + 
Sbjct: 245 CNKGLLSIATKLKNLMG---KNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVT 301

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TLI+GY + G+S  A ++ +EM++ G+  + + YN+ I  L  EG  + A F+
Sbjct: 302 PNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFL 361

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           + ++  +++ P+  TYS L  G C      +AF+L+  ++      +  ++ +L +   K
Sbjct: 362 VKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVK 421

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           + +   A  +L  M  R +  D  T   + DG C+ G    A+++   M+
Sbjct: 422 NEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEME 471



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 172/367 (46%), Gaps = 20/367 (5%)

Query: 291 THNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           TH+ I++   K  + + A+ I R  +    ID   + + TL+  Y          R+CD 
Sbjct: 78  THSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLFSY----------RMCDS 127

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
             +        V++S             A  V S M D    P   + +     L     
Sbjct: 128 SPR--------VFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHR 179

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A   + ++    +  ++Y++N++++ LCKS  L  A ++L  M   G+ P++++Y T
Sbjct: 180 VDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNT 239

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G+C  G +  A ++   M K   +PN+V +NS+I+G CK+  L  A       + + 
Sbjct: 240 LIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMN 299

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  + +TYNTLINGY   G    A  ++ EM   G+  + + YN LI  LCK G  ++A 
Sbjct: 300 VTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAA 359

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L+K +    ++P+  TY+ L++      + +   +L+  MV SG  P+ QT+  + S  
Sbjct: 360 FLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAF 419

Query: 649 LGEKSAE 655
           +  +  E
Sbjct: 420 VKNEDFE 426



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 152/321 (47%), Gaps = 1/321 (0%)

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           D + R + +L   YA       A  +   M   G +P     N+ +  L     V+ AL 
Sbjct: 126 DSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALT 185

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
              +M    I P+ +T++++   LC++G +++A ++  ++    +  +  SYN LI   C
Sbjct: 186 FYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHC 245

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
               L+ A +L + M   GL P+++T+ +LI G+CK G +  A + +  MK +   PN V
Sbjct: 246 NKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTV 305

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN++ING  +  + + A  + +   R G+  D +TYN LI G    GK  +A  +  E+
Sbjct: 306 TYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKEL 365

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               +  N   Y+ LI+  C      +A +L K M+  G  P+  T+  L + F KN   
Sbjct: 366 DKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDF 425

Query: 620 EEVIELHDDMVLSGVSPDNQT 640
           E    +  DM    ++ D+ T
Sbjct: 426 EGAFNVLMDMFARSMASDSNT 446


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 256/514 (49%), Gaps = 35/514 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS + K+N+      L ++M + G   N  T+++++   C+  +L  AL++ 
Sbjct: 80  SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVL 139

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
            +M+K G  P++V  + ++N  C    +  A+ L  +M  M    D+V            
Sbjct: 140 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLH 199

Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                              P+  T+  ++NG CK G ++ A  +   M K  I+ NV  Y
Sbjct: 200 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIY 259

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+IDG  +    ++A  L ++M  +G+ P+   YNS I  L   G    A  +LSDMI+
Sbjct: 260 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE 319

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I P+  T++ L     + G + +A KL +++++  +  +  +YN LIN  C  + L  
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+Q+ + M+ +  +PD++TY TLI G+CK   +E  ++++  M +     N V YN++I 
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 439

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL +    D A+ + +     G+  D ITY+ L++G    GK+ +A  +F  ++   +  
Sbjct: 440 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 499

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YNI+I  +CK G  +   +L   + L G+ P+ + YTT+++ F +    EE   L 
Sbjct: 500 NIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 559

Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
            +M   G  PD+  YN +I   L  G+K+A  ++
Sbjct: 560 REMKEDGTLPDSGCYNTLIRARLRDGDKAASAEL 593



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 234/464 (50%), Gaps = 39/464 (8%)

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E KL++A++L+  M+KS  +P+++ F+ +++   ++   +  + L  +M  +    +  N
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG---IPHN 115

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T++ ++N FC+  ++  A  +   M+K G + ++ T ++L++GY  G    EA+ L D
Sbjct: 116 HYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 175

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +MV+ G  P+ V +N+ IH LF       A+ ++  M+ +   PD FTY  +  GLC+ G
Sbjct: 176 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 235

Query: 409 CVK-----------------------------------QAFKLHNQVLEEHMVGDAYSYN 433
            +                                     AF L N++  + +  D ++YN
Sbjct: 236 DIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 295

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+ LC     + A +LLS MI R + P+++T+ +LID + K G +  A ++++ M + 
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEA 552
              PN+V YNS+ING C    LD A+ +      +  L D +TYNTLI G+    ++ E 
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F EM   G+  N V YN LI  L + G    A+++ K M+  G+ PD +TY+ L+  
Sbjct: 416 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 475

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             K    E+ + + + +  S + P+  TYN +I  +      ED
Sbjct: 476 LCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 238/485 (49%), Gaps = 4/485 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+   I   ++ L+       I     L  +MV  GY  +  TFN +I+
Sbjct: 135 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIH 194

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            L    K  EA++L  RM+  G  P++  +  ++N  C+ GD++ AL L +KM       
Sbjct: 195 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM---EKGK 251

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +  N V +N II+G CK   ++ A ++   M   GI  +V TY +LI      G   +A 
Sbjct: 252 IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDAS 311

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           RL  +M++R + PN V +NS I     EG +  A  +  +MI + I P+  TY+ L  G 
Sbjct: 312 RLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 371

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C +  + +A ++   ++ +  + D  +YN LI   CK+  +    +L   M  RGL+ + 
Sbjct: 372 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 431

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TLI G  + G+ + A ++++ M      P+++ Y+ +++GLCK   L+ A  + + 
Sbjct: 432 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 491

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            Q+  +   I TYN +I G    GK+ + + +F  +   G+  N + Y  +I+  C+ G 
Sbjct: 492 LQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 551

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A  L + M   G +PD   Y TL+    ++       EL  +M   G   D  T + 
Sbjct: 552 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 611

Query: 644 IISPL 648
           +I+ L
Sbjct: 612 VINML 616



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 209/401 (52%), Gaps = 4/401 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A  +++K++      ++  +N  +  L K   +   +
Sbjct: 217 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAF 276

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ +M + G   +V T+N +I  LC   +  +A  L   M++  I PNVV FN +I+  
Sbjct: 277 DLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAF 336

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KLF +M   S D   PN VT+N +INGFC   R++ A++I   M+     
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSID---PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 393

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY TLI G+ +    EE + L  EM +RGL+ N V YN+ I  LF  GD + A  +
Sbjct: 394 PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 453

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC+ G +++A  +   + +  M  + Y+YNI+I  +CK
Sbjct: 454 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P++I Y T+I G+C+ G  E A  ++  MK+    P+   
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           YN++I    +D    A+  L++  +  G + DA T + +IN
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 162/318 (50%), Gaps = 7/318 (2%)

Query: 335 ARGGSSE----EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           +R G SE    +A+ L  EMVK    P+ + ++  +  +      +  + +   M +  I
Sbjct: 53  SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             +H+TYSIL    CR   +  A  +  ++++     D  + + L+N  C    ++ A  
Sbjct: 113 PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 172

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L+  M+  G  PD +T+ TLI G         AV + + M     +P+L  Y +++NGLC
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232

Query: 511 KDASLDAAKSLLQASQRIGLLDA--ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           K   +D A SLL+  ++ G ++A  + YNT+I+G      + +AF +F++M   GI  + 
Sbjct: 233 KRGDIDLALSLLKKMEK-GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 291

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             YN LI+ LC +G +  A  L+  MI   I P+ VT+ +L+  F+K     E  +L D+
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351

Query: 629 MVLSGVSPDNQTYNAIIS 646
           M+   + P+  TYN++I+
Sbjct: 352 MIQRSIDPNIVTYNSLIN 369



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 166/343 (48%), Gaps = 24/343 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRAC 156
           +++  L N+ R+ DA  L+ +++                     K  P V  F++L+ A 
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIER-------------------KINPNVVTFNSLIDAF 336

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            + G    A  +  ++  +    +I  +N+ ++     + +    +++  MVS   + +V
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 396

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T+N +I   CK  ++EE + L+  M + G+  N V +N +I    Q GD + A K+F+K
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M     D V P+ +T++ +++G CK G++E A  +   + K+ ++ N+ TY  +I+G  +
Sbjct: 457 M---VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCK 513

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G  E+   L   +  +G+ PN ++Y + I     +G  E A  +  +M +    PD   
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
           Y+ L +   R+G    + +L  ++     VGDA + +++IN L
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 226/434 (52%), Gaps = 4/434 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K  +   A+SL  +M   GI  N V  N++IN  C +G + F+   F  +G
Sbjct: 13  FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS---FSVLG 69

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      P+++T N ++ G C  G V+ +      ++  G   +  +Y TL++G  + G
Sbjct: 70  KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIG 129

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  A++L   +  R   PN V+YN+ I  L  +  V  A  + S+M  + I PD  TY+
Sbjct: 130 ETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYT 189

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +  AF L ++++ +++    Y YNILIN LCK  N+  AK LL+ M   
Sbjct: 190 TLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKE 249

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P ++TY TL+DGYC  G ++ A Q++  M ++   PN+  YN +INGLCK   +D A
Sbjct: 250 GIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEA 309

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +LL+      ++ D +TYN+LI+G   +G+I  A  + +EM + G   + V Y  L++ 
Sbjct: 310 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 369

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L   M   GI P   TYT L+    K    +   EL   +++ G   D
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCID 429

Query: 638 NQTYNAIISPLLGE 651
             TY  +IS L  E
Sbjct: 430 VWTYTVMISGLCKE 443



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 257/497 (51%), Gaps = 6/497 (1%)

Query: 141 ICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           + + TP +  F+ ++ +  ++     A  + ++++VKG   +    N  ++    L ++ 
Sbjct: 3   LVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMA 62

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             + +  +++  GY  +  T N ++  LC + +++++L  + +++  G   + V +  ++
Sbjct: 63  FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL 122

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N  C++G+   A+KL R   ++   S  PN V +N II+G CK   V  A ++   M   
Sbjct: 123 NGLCKIGETRCAVKLLR---MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           GI  +  TY TLI G+   G    A  L DEM+ + + P   +YN  I+ L  EG+V+ A
Sbjct: 180 GIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEA 239

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L+ M  + I P   TYS L  G C  G V+ A ++ + +++  +  + YSYNI+IN 
Sbjct: 240 KNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING 299

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LCK   +  A  LL  M+ + ++PD +TY +LIDG CK G I  A+ +   M    +  +
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFS 557
           +V Y S+++ LCK+ +LD A +L    +  G+   + TY  LI+G    G++  A  +F 
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            +   G  ++   Y ++I+ LCK G + +A  +   M  +G IP+ VT+  ++    +  
Sbjct: 420 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479

Query: 618 SPEEVIELHDDMVLSGV 634
             ++  +L  +M+  G+
Sbjct: 480 ENDKAEKLLHEMIAKGL 496



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 199/383 (51%), Gaps = 3/383 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    +IG T  A  +++ ++ +    ++  +N  +  L K   +   + LY EM 
Sbjct: 118 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   +  T+  +IY  C   +L  A SL   M+   I P V  +N++IN  C+ G+++
Sbjct: 178 ARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVK 237

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L   + VM+ + + P  VT++ +++G+C +G V+ A++I +AM++ G++ NV +Y 
Sbjct: 238 EAKNL---LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYN 294

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I+G  +    +EA+ L  EM+ + ++P+ V YNS I  L   G +  AL ++++M  +
Sbjct: 295 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  TY+ L   LC+N  + +A  L  ++ E  +    Y+Y  LI+ LCK   L  A
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++L   ++V+G   D+ TY  +I G CK G  + A+ +   M+     PN V +  II  
Sbjct: 415 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474

Query: 509 LCKDASLDAAKSLLQASQRIGLL 531
           L +    D A+ LL      GLL
Sbjct: 475 LFEKDENDKAEKLLHEMIAKGLL 497



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 180/363 (49%), Gaps = 1/363 (0%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P  +  N I+    K+ +   A  +   M   GI  N  T   LI+ +   G    +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +++K G  P+ +  N+ +  L  +G+V+ +L     ++ +    DH +Y  L  GLC+
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G  + A KL   + +     +   YN +I+ LCK   +  A  L S M  RG+ PD IT
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLI G+C  G + GA  + + M      P + IYN +IN LCK+ ++  AK+LL    
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 527 RIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           + G+    +TY+TL++GY + G++  A  +F  M  +G+  N   YNI+IN LCK     
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L++ M+   ++PD VTY +L+    K+      + L ++M   G   D  TY +++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 646 SPL 648
             L
Sbjct: 368 DAL 370



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 20/349 (5%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLK 173
           L+G LM A S         LLD   +    P V+  + L+ A  + G  + A +++  + 
Sbjct: 197 LLGQLMGAFS---------LLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            +G    +  ++  +     + E+    +++  MV  G   NV ++N++I  LCK  +++
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA++L   ML   + P+ V +N +I+  C+ G +  AL L   M  M       + VT+ 
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL---MNEMHHRGQPADVVTYT 364

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +++  CK   ++ A  +   M + GI   + TY  LIDG  +GG  + A  L   ++ +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G   +   Y   I  L  EG  + AL + S M D    P+  T+ I+ + L       +A
Sbjct: 425 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKA 484

Query: 414 FK-LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            K LH  + +  +V D    ++ +      N    A++LL  MI +GL+
Sbjct: 485 EKLLHEMIAKGLLVLDFKVADVFV-----QNENDKAEKLLHEMIAKGLL 528


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 261/530 (49%), Gaps = 42/530 (7%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           ++A  ++   +   + +  ++ +G   ++  +N  +  L +   I    K++ EM +   
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V ++ T+N +I   CK  +L+ A  +  RM +  + PN++ FN +++  C++  ++ A  
Sbjct: 243 VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARS 302

Query: 273 LFRKM-----------------GVMSGDS---------------VLPNSVTHNCIINGFC 300
           L ++M                 G++  D                +  N+ T + ++NG C
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLC 362

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G+VE AEEI     + G+  +   Y T ++GY R G   +A+   + M   GL PN++
Sbjct: 363 KQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSI 422

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            +NS I       +++ A   +  M +K + P   TY+ L  G  +     + F++  Q+
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E  +  +  SY  LIN LCK   +  A+ +L  MI RG++P+   Y  LIDG C  G +
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTL 539
           + A++ ++ M + E  P LV YN +I+GLCK   L  A+  L Q +      D ITYN+L
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV----MI 595
           I+GY   G +++   ++  M+N+GI      Y+ LI+     GC ++  EL++     M+
Sbjct: 603 ISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLIS-----GCSKEGIELVEKLYNEML 657

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              ++PD V Y  ++  +++  + ++   LH  M+  G+ PD  TYN++I
Sbjct: 658 QMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLI 707



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 244/481 (50%), Gaps = 4/481 (0%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D+  +++  G       +   +   VKL  +    +    M   G   NV  +N++I  L
Sbjct: 162 DLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGL 221

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C+E ++ +A  ++  M    +  ++V +N +I+  C+VG+L+ A K+  +M      SV 
Sbjct: 222 CREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM---KEKSVA 278

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN +T N +++G CK+ +++ A  +   M   G   +  TY+ L DG  R      A+ L
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            ++  ++G+  NN   +  ++ L  +G VE A  +L    +  +  D   Y+    G CR
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G + +A     ++    +  ++ ++N LI+  C    +  A++ +  M  +G+ P + T
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVET 458

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDGY K    +   Q+ E M+++  KPN+V Y S+IN LCKD  +  A+ +L+   
Sbjct: 459 YNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMI 518

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+L +A  YN LI+G  + GK+ +A   F EM    I+   V YN+LI+ LCK G   
Sbjct: 519 CRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLT 578

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A + +  +   G  PD +TY +L++ ++   +  + + L++ M   G+ P  +TY+ +I
Sbjct: 579 EAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI 638

Query: 646 S 646
           S
Sbjct: 639 S 639



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 242/464 (52%), Gaps = 5/464 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++L+    ++   + A  ++++++V G     + ++     L++ ++     +LY++ 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N  T ++++  LCK+ K+E+A  +  +  ++G+  + V +N  +N  C++GD+
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A+    +M       + PNS+T N +I+ FC +  ++ AEE    M + G+  +V TY
Sbjct: 403 NKAILTIERMESFG---LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETY 459

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDGY +  + +   ++ ++M + G+ PN V Y S I+ L  +G +  A  VL DMI 
Sbjct: 460 NTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMIC 519

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P+   Y++L  G C  G VK A +  ++++   +     +YN+LI+ LCK   L  
Sbjct: 520 RGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTE 579

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+  L+ +   G  PD+ITY +LI GY   GN+   + +YE MK +  KP +  Y+ +I+
Sbjct: 580 AEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLIS 639

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G C    ++  + L     ++ LL D + YN +I+ Y   G   +A+++   M + GI  
Sbjct: 640 G-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHP 698

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +K+ YN LI    + G     ++L+  M    + P   TY  LV
Sbjct: 699 DKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILV 742



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 212/421 (50%), Gaps = 4/421 (0%)

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E +  + + L+  +  SG   +   +   I  A ++ +L+  ++    +  M    V PN
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEF---LDSMRKRGVRPN 210

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              +N +I G C+  R+  AE++   M    +  ++ TY TLIDGY + G  + A ++ +
Sbjct: 211 VFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRE 270

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M ++ + PN + +NS +  L     ++ A  +L +M      PD +TYSIL  GL R  
Sbjct: 271 RMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCD 330

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A +L+ Q  E+ +  + Y+ +IL+N LCK   +  A+++L      GL+ D + Y 
Sbjct: 331 DGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYN 390

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           T ++GYC+ G++  A+   E M+    +PN + +NS+I+  C    +D A+  ++     
Sbjct: 391 TFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEK 450

Query: 529 GLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  ++ TYNTLI+GY         F +  +M  +G+  N V Y  LIN LCK G   +A
Sbjct: 451 GVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEA 510

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             +++ MI  G++P+   Y  L+         ++ +   D+M+ S +SP   TYN +I  
Sbjct: 511 EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDG 570

Query: 648 L 648
           L
Sbjct: 571 L 571



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 184/372 (49%), Gaps = 4/372 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++L+     +   + A + ++K+  KG + S+  +N  +    KL    R +++ ++M
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV ++  +I  LCK+ K+ EA  +   M+  G+ PN   +NM+I+ +C VG +
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL+ F +M       + P  VT+N +I+G CK G++  AE+    +  +G   +V TY
Sbjct: 543 KDALRFFDEM---MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITY 599

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI GYA  G+  + L L + M   G+ P    Y+  I     EG +E    + ++M+ 
Sbjct: 600 NSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQ 658

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            ++ PD   Y+ +       G  ++A+ LH  +L++ +  D  +YN LI    +   L+ 
Sbjct: 659 MNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSN 718

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            K L+++M  + L P   TY  L+ G+C   +  GA   Y  M +    PN  I N +  
Sbjct: 719 IKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTA 778

Query: 508 GLCKDASLDAAK 519
           GL ++  L   +
Sbjct: 779 GLEQEGRLQEVQ 790



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 1/198 (0%)

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G   D   Y   I    K  N++  ++  ++M+K   +PN+ IYN +I GLC++  +  A
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230

Query: 519 KSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + +      I L+ +I TYNTLI+GY   G++  AF M   M+   +A N + +N L++ 
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSG 290

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK    ++AR L+K M ++G +PD  TY+ L     +       +EL++     G+  +
Sbjct: 291 LCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRIN 350

Query: 638 NQTYNAIISPLLGEKSAE 655
           N T + +++ L  +   E
Sbjct: 351 NYTGSILLNGLCKQGKVE 368



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 36/211 (17%)

Query: 475 CKGGNIEGAVQVYENMKKVEK-----------------------------------KPNL 499
           CK   +  AV++YE M++  K                                   + + 
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
            +Y   I    K  +L      L + ++ G+  +   YN LI G     +I +A  MF E
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M N+ +  + V YN LI+  CK G    A ++ + M    + P+ +T+ +L++   K   
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            +E   L  +M ++G  PD  TY+ +   LL
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLL 327


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 174/650 (26%), Positives = 308/650 (47%), Gaps = 53/650 (8%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTW--VGENNRFSHSLESSCAIVHLLVNWRRFDD 112
            P+L  +L NR  S  +    L+   YT+  + +    +H  E + A    L+      D
Sbjct: 88  GPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVD 147

Query: 113 ALL---LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYD 167
           A++   L+     A      E L+ LL         P VF  + L+++    G +  A D
Sbjct: 148 AIIASHLLKGFCEAKRTD--EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADD 205

Query: 168 VIQKLKVKGH--SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
           +++ +   G   S  + A+N  +    K  ++ +   L+KEMV  G   ++ T++ V++A
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LCK   +++A +   +M+  G+ P+   +N +I      G  + A+++F++M      S+
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM---RRQSI 322

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           LP+ V  N ++   CK G+++ A ++   M   G + +V +Y  +++GYA  G   +   
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L D M+  G+ P    +N  I      G ++ A+ + ++M D  + P   TY  +   LC
Sbjct: 383 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI---VR---- 458
           R G +  A +  NQ++++ +V D Y+Y+ LI   C   +L  AK+L+S ++   +R    
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502

Query: 459 ----------------------------GLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
                                       GL PD + Y  L+DGYC  G +E A++V++ M
Sbjct: 503 FFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 562

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKI 549
                +PN+V Y +++NG CK   +D   SL +   + G+  + I YN +I+G F  G+ 
Sbjct: 563 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 622

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             A   F EM   GIA+NK  Y+I++  L K  C+ +A  L K +    +  D +T  T+
Sbjct: 623 VPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTM 682

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAED 656
           +    +    EE  +L   +  SG+ P   TY+ +I+ L+ E   + AED
Sbjct: 683 IAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAED 732



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 247/534 (46%), Gaps = 52/534 (9%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-------LYKEMVSCGYVEN 215
           E A+D++ +L+ +G  V     N FL+ L +                L+    S      
Sbjct: 48  EEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPR 107

Query: 216 VNTFNLVIYALCKEC-----KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           V +     YA+  +C     + E AL+ + ++L++G+  + +  + ++   C+    + A
Sbjct: 108 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYA 328
           L +        G   +P+  ++N ++   C  G+   A+++   M + G  C  +V  Y 
Sbjct: 168 LDILLHRTPELG--CVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYN 225

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDG+ + G   +A  L  EMV+RG+ P+ V Y+S +H L     ++ A   L  M++K
Sbjct: 226 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK 285

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD++TY+ L  G    G  K+A ++  ++  + ++ D  + N L+  LCK   +  A
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYC-KG------------------------------ 477
           + +  +M ++G  PD+ +Y  +++GY  KG                              
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKA 405

Query: 478 ----GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
               G ++ A+ ++  M+    KP++V Y ++I  LC+   +D A          G++ D
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              Y+ LI G+  +G + +A  + SE+ N G+ ++ V +  +IN LCK G    A+ +  
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +  G+ PD V Y  L+  +      E+ + + D MV +G+ P+   Y  +++
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 206/405 (50%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++A    G  + A  +  +++  G    +  +   ++ L ++ ++    + + +M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G V +   ++ +I   C    L +A  L   ++ +G+  ++V F  IIN  C++G +
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G  + P++V +N +++G+C +G++E A  +  AM+ AGI+ NV  Y
Sbjct: 518 MDAQNIF-DLTVNVG--LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM+++G+ P+ ++YN  I  LF  G    A     +M +
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  +  TYSI+ +GL +N C  +A  L  ++   ++  D  + N +I  + ++  +  
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +S+   GL+P  +TY  +I    K G +E A  ++ +M+    +P+  + N ++ 
Sbjct: 695 AKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            L K   +  A + L +  +R   L+ +T   L++ +   G   E
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 203/416 (48%), Gaps = 4/416 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            + L+ +  + G  + A DV   + +KG +  + ++   L+       +     L+  M+
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G    + TFN++I A      L++A+ ++  M   G+ P+VV +  +I   C++G ++
Sbjct: 389 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A++ F +M       V+P+   ++C+I GFC  G +  A+E+   ++  G+  ++  + 
Sbjct: 449 DAMEKFNQM---IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           ++I+   + G   +A  + D  V  GL P+ VVYN  +      G +E AL V   M+  
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I P+   Y  L  G C+ G + +   L  ++L++ +      YNI+I+ L ++     A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K     M   G+  +  TY  ++ G  K    + A+ +++ ++ +  K +++  N++I G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 509 LCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           + +   ++ AK L  +  R GL+  A+TY+ +I      G + EA  MFS M+N G
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 243/464 (52%), Gaps = 5/464 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  L+  C+++G  E AY++  ++K+ G   ++   N+ L    + N +   + L+ E 
Sbjct: 362 IFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEA 421

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G + NV T+N+++  L +  K+ EA +L+ +M+  GI P++V +N +I   C+ G +
Sbjct: 422 VEHG-ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCM 480

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  + + +       + PN+VT+  +I+GF K G  E A  +   M+ A I     T+
Sbjct: 481 DKAYSMLKSI---LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTF 537

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I+G  + G   E     +  +K+G +  ++ YNS I   F EG V+ AL    +M +
Sbjct: 538 NTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCE 597

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I PD  TY+ L  GLC++  +  A ++H+ +  + M  D  +Y+ LI+  CK +++ +
Sbjct: 598 SGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMES 657

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +  + ++  GL P+ + Y ++I G+    N+E A+ +++ M K +   +L +Y SII 
Sbjct: 658 ASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIG 717

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL K+  L  A  L        ++ D + Y  LING   NG++  A  +  EM    I  
Sbjct: 718 GLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITP 777

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           + + YNILI    + G  Q+A  L   M+  G++PD  TY  LV
Sbjct: 778 SVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 262/544 (48%), Gaps = 52/544 (9%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL--SHLVK----LNEIG 198
           +   + A++ AC + G      + ++ L++K   VS+    N +    L+K    L ++ 
Sbjct: 289 SKGTYTAVIVACVKQG------NFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVN 342

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
              +L+ E+V  G V +V  F+++I    K   +E+A  LY RM   GI PNV   N ++
Sbjct: 343 LALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLL 402

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
               +   LE A  LF +  V  G   + N VT+N ++    +LG+V  A  +   M+  
Sbjct: 403 EGFHEQNLLEHAYGLFDE-AVEHG---ITNVVTYNILLKWLGELGKVNEACNLWEKMVSK 458

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           GI  ++ +Y  LI G+ + G  ++A  +   +++RGL PN V Y   I   F +GD E A
Sbjct: 459 GITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERA 518

Query: 379 LFVLSDMIDKHICP-DH----------------------------------FTYSILTKG 403
             V   M+  +I P DH                                   TY+ +  G
Sbjct: 519 FVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDG 578

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
             + G V  A   + ++ E  +  D  +Y  LI+ LCKSN +  A ++ S M  +G+  D
Sbjct: 579 FFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLD 638

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++ Y  LIDG+CK  ++E A + +  +  +   PN V+YNS+I+G     +++AA +L Q
Sbjct: 639 VVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQ 698

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
              +  +  D   Y ++I G    GK++ A  ++SEM +  I  + V Y +LIN L   G
Sbjct: 699 EMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNG 758

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             + A +++K M  + I P  + Y  L+    +  + +E   LHD+M+  G+ PD+ TY+
Sbjct: 759 QLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYD 818

Query: 643 AIIS 646
            +++
Sbjct: 819 ILVN 822



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 248/501 (49%), Gaps = 5/501 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           ++RAC + G  E      ++ K +G  V   A++  +  + +  ++    +L KEM   G
Sbjct: 226 VMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFG 285

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +V +  T+  VI A  K+    EAL L   M+  G+  NV+    ++   C +GD+  AL
Sbjct: 286 WVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLAL 345

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +LF +  V+ G  V+P+ V  + +ING  K+G +E A E+   M   GI  NV    +L+
Sbjct: 346 QLFDE--VVEG-GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLL 402

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           +G+      E A  L DE V+ G+  N V YN  + WL   G V  A  +   M+ K I 
Sbjct: 403 EGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGIT 461

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P   +Y+ L  G C+ GC+ +A+ +   +LE  +  +A +Y +LI+   K  +   A  +
Sbjct: 462 PSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVV 521

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M+   + P   T+ T+I+G  K G +        N  K       + YNSII+G  K
Sbjct: 522 FEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK 581

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           + ++D+A    +     G+  D ITY +LI+G   + KI  A  M S+M+  G+ ++ V 
Sbjct: 582 EGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVA 641

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y+ LI+  CK    + A +    ++  G+ P+ V Y ++++ F    + E  + LH +M+
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701

Query: 631 LSGVSPDNQTYNAIISPLLGE 651
            + V  D Q Y +II  LL E
Sbjct: 702 KNKVPCDLQVYTSIIGGLLKE 722



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 285/617 (46%), Gaps = 46/617 (7%)

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV-NWRRFDDALLLMGNLMSANSVSPL 129
           + +PK AL+F+  V     F  +++    ++H+L  N +       L+ N +  ++    
Sbjct: 71  KSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNNYVFGDATPSA 130

Query: 130 E-FLEGLLD---SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           + F+E LL+    Y   ++   VF+ L+++  ++     A +  + +        +   N
Sbjct: 131 KVFVECLLECSGRYGF-ESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMN 189

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           N L+ +V+ N +    +LY EMV  G   +  T ++V+ A  KE K EE    +      
Sbjct: 190 NLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGR 249

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G+  +   +++++   C+  DL  A +L ++M        +P+  T+  +I    K G  
Sbjct: 250 GLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGW---VPSKGTYTAVIVACVKQGNF 306

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  ++  M+  G+  NV    +L+ GY   G    AL+L DE+V+ G++P+ V+++  
Sbjct: 307 VEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVL 366

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I+     GD+E A  + + M    I P+ F  + L +G      ++ A+ L ++ + EH 
Sbjct: 367 INGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV-EHG 425

Query: 426 VGDAYSYNILINYL-----------------------------------CKSNNLAAAKQ 450
           + +  +YNIL+ +L                                   CK   +  A  
Sbjct: 426 ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYS 485

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L S++ RGL P+ +TY  LIDG+ K G+ E A  V+E M      P    +N++INGL 
Sbjct: 486 MLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLG 545

Query: 511 KDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   +   +  L    + G +  +ITYN++I+G+F  G +  A   + EM   GI+ + +
Sbjct: 546 KTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVI 605

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  LI+ LCK      A E+   M   G+  D V Y+ L+  F K    E   +   ++
Sbjct: 606 TYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTEL 665

Query: 630 VLSGVSPDNQTYNAIIS 646
           +  G++P+   YN++IS
Sbjct: 666 LDIGLTPNTVVYNSMIS 682



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 182/369 (49%), Gaps = 5/369 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP++  ++ L+    + G  + AY +++ +  +G   +   +   +    K  +  R + 
Sbjct: 461 TPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFV 520

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++++M++       +TFN VI  L K  ++ E        +K G     + +N II+   
Sbjct: 521 VFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFF 580

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G ++ AL  +R+M   SG S  P+ +T+  +I+G CK  ++  A E+   M   G+  
Sbjct: 581 KEGAVDSALLAYREM-CESGIS--PDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKL 637

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V  Y+ LIDG+ +    E A +   E++  GL PN VVYNS I       ++E AL + 
Sbjct: 638 DVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLH 697

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +MI   +  D   Y+ +  GL + G +  A  L++++L + +V D   Y +LIN L  +
Sbjct: 698 QEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNN 757

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  A ++L  M    + P ++ Y  LI G  + GN++ A ++++ M      P+   Y
Sbjct: 758 GQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTY 817

Query: 503 NSIINGLCK 511
           + ++NG  K
Sbjct: 818 DILVNGKLK 826



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 162/334 (48%), Gaps = 3/334 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     +  L+    + G +E A+ V +++     + + H +N  ++ L K   +     
Sbjct: 496 KPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQD 555

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
                +  G+V    T+N +I    KE  ++ AL  Y  M +SGI P+V+ +  +I+  C
Sbjct: 556 KLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLC 615

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   +  AL++   M       +  + V ++ +I+GFCK+  +E A +    ++  G+  
Sbjct: 616 KSNKIGLALEMHSDMKY---KGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTP 672

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N   Y ++I G+    + E AL L  EM+K  +  +  VY S I  L  EG +  AL + 
Sbjct: 673 NTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLY 732

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           S+M+ K I PD   Y++L  GL  NG ++ A K+  ++   ++      YNILI    + 
Sbjct: 733 SEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFRE 792

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            NL  A +L   M+ +GL+PD  TY  L++G  K
Sbjct: 793 GNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 194/405 (47%), Gaps = 3/405 (0%)

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           + G   +   FN ++    +V  +  A++ FR M  +  D ++P     N ++    +  
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTM--LEHD-LVPWVPIMNNLLTAMVRRN 199

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            V  A ++   M++ GI  +  T   ++    + G  EE  +   E   RGL  +   Y+
Sbjct: 200 MVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYS 259

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             +  +    D+  A  +L +M +    P   TY+ +     + G   +A +L ++++  
Sbjct: 260 ILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSV 319

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +      L+   C   ++  A QL   ++  G++PD++ +  LI+G  K G++E A
Sbjct: 320 GLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKA 379

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGY 543
            ++Y  MK +  +PN+ I NS++ G  +   L+ A  L   +   G+ + +TYN L+   
Sbjct: 380 YELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWL 439

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              GK+ EA  ++ +M + GI  + V YN LI   CK GC  +A  ++K ++  G+ P+ 
Sbjct: 440 GELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNA 499

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           VTYT L+  F K    E    + + M+ + ++P + T+N +I+ L
Sbjct: 500 VTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGL 544



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 8/206 (3%)

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           Y+  K     + AL+    ++   E A     +L   G + +   +N+ +S  + LN + 
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L++EM+      ++  +  +I  L KE KL  AL LY  ML   I P++V + ++I
Sbjct: 692 AALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N     G LE A K+ ++   M G+++ P+ + +N +I G  + G ++ A  +   M+  
Sbjct: 752 NGLSNNGQLENASKILKE---MDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDK 808

Query: 319 GIDCNVRTYATLIDG-----YARGGS 339
           G+  +  TY  L++G     +  GGS
Sbjct: 809 GLVPDDTTYDILVNGKLKVSHTLGGS 834


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 245/485 (50%), Gaps = 4/485 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+  + K+   G+  +   +N  L+ L     +    +L   MV   +V ++ T N ++ 
Sbjct: 144 AFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVN 203

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC + ++ EA+ L  RM+ +G  PN   +  I+N  C+ G+   AL L RKM       
Sbjct: 204 GLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM---EHRK 260

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P+ VT+  II+  CK GR++ A      M   GI  NV TY +LI  +   G  ++  
Sbjct: 261 IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGA 320

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L  +M+ R + PN V +++ I  L  EG +  A  + ++MI + I P+  TY+ L  GL
Sbjct: 321 QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGL 380

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C +  + +A ++ + ++ +    D ++YNILIN  CK+  +    +L   M +RG+I D 
Sbjct: 381 CNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADT 440

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TLI G+C+   +  A +V++ M      P ++ Y  +++GLC +  L+ A  +L  
Sbjct: 441 VTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ 500

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             +  + LD   YN +I+G     K+ +A+++F  + + G+  +   YNI+++ LCK   
Sbjct: 501 MHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSS 560

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A  L + M   G  PD  TY TL+    +       ++L ++M   G S D  T   
Sbjct: 561 LSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKI 620

Query: 644 IISPL 648
           ++  L
Sbjct: 621 VMDML 625



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 213/429 (49%), Gaps = 4/429 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+      G    A +++  + +  H   +   N  ++ L   + +     L   M
Sbjct: 162 TFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARM 221

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           ++ G   N  T+  ++  +CK      AL L  +M    I P+VV + +II+  C+ G L
Sbjct: 222 MANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRL 281

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL  F +M       +  N  T+N +I  FC  GR +   ++   MI   I  NV T+
Sbjct: 282 DDALSFFSEM---ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTF 338

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LID   + G   EA  L +EM+ RG+ PN + YNS I+ L  +  ++ A  ++  M+ 
Sbjct: 339 SALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVS 398

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   PD +TY+IL  G C+   V    +L  ++    M+ D  +Y+ LI   C+S  L  
Sbjct: 399 KGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIV 458

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK++   M+ +G+ P I+TY  L+DG C  G +E A+ + + M K + + ++ IYN II+
Sbjct: 459 AKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIH 518

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G+C    +D A SL  +    G+  D  +YN +++G      ++EA A+F +M+  G   
Sbjct: 519 GMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEP 578

Query: 567 NKVGYNILI 575
           +   YN LI
Sbjct: 579 DGCTYNTLI 587



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 212/455 (46%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++ M+    +  V  FN +   L +  + +  L+L  +M   GI  ++   N++IN  C
Sbjct: 77  LFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFC 136

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L FA   F  MG +      PN+VT N ++NG C  GRV  A E+   M+ +    
Sbjct: 137 RRRKLGFA---FSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP 193

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ T  T+++G        EA+ L   M+  G  PN   Y   ++ +   G+   AL +L
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M  + I P   TY+I+   LC++G +  A    +++  + +  + ++YN LI   C  
Sbjct: 254 RKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSF 313

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                  QLL  MI R + P+++T+  LID   K G +  A  +Y  M     +PN + Y
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I GLC D  LD A  ++      G   D  TYN LING+    ++ +   +F +M  
Sbjct: 374 NSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  + V Y+ LI   C+      A+++ + M+  G+ P  +TY  L+     N   EE
Sbjct: 434 RGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEE 493

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + + D M    +  D   YN II  +      +D
Sbjct: 494 ALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDD 528



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 216/495 (43%), Gaps = 33/495 (6%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N     L +  +      L K+M   G   ++ T N++I   C+  KL  A S   ++ 
Sbjct: 93  FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-------------------------- 277
           K G  PN V FN ++N  C  G +  A++L   M                          
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVS 212

Query: 278 ------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
                   M  +   PN  T+  I+N  CK G    A ++   M    I  +V TY  +I
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           D   + G  ++AL    EM  +G+  N   YNS I    + G  +    +L DMI + I 
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  T+S L   L + G + +A  L+N+++   +  +  +YN LI  LC    L  A Q+
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M+ +G  PDI TY  LI+G+CK   ++  ++++  M       + V Y+++I G C+
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452

Query: 512 DASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              L  AK + Q     G+   I TY  L++G   NG++ EA  +  +M    + ++   
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YNI+I+ +C       A  L   +   G+  D  +Y  +++   K  S  E   L   M 
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572

Query: 631 LSGVSPDNQTYNAII 645
             G  PD  TYN +I
Sbjct: 573 EDGYEPDGCTYNTLI 587



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 224/458 (48%), Gaps = 26/458 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
            IV+ L    R  +A+ L+  +M AN   P +F  G +               L R C  
Sbjct: 200 TIVNGLCLKDRVSEAVDLIARMM-ANGCQPNQFTYGPI---------------LNRMCKS 243

Query: 159 IGATEGAYDVIQKL---KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
            G T  A D+++K+   K+K H V+   +   + +L K   +      + EM + G   N
Sbjct: 244 -GNTASALDLLRKMEHRKIKPHVVT---YTIIIDNLCKDGRLDDALSFFSEMETKGIKAN 299

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T+N +I + C   + ++   L   M+   I PNVV F+ +I+   + G L  A  L+ 
Sbjct: 300 VFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYN 359

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M +  G  + PN++T+N +I G C   R++ A ++   M+  G D ++ TY  LI+G+ 
Sbjct: 360 EM-ITRG--IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFC 416

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           +    ++ +RL  +M  RG++ + V Y++ I        +  A  V  +M+ + + P   
Sbjct: 417 KAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIM 476

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY+IL  GLC NG +++A  + +Q+ +  M  D   YNI+I+ +C +N +  A  L  S+
Sbjct: 477 TYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSL 536

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
             +G+  DI +Y  ++ G CK  ++  A  ++  MK+   +P+   YN++I    +   +
Sbjct: 537 PSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDI 596

Query: 516 DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             +  L++  +R G     +   ++     +G++ ++F
Sbjct: 597 TTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGELDKSF 634



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 153/317 (48%), Gaps = 1/317 (0%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           ++A+ L   M++   +P  + +N     L      +  L +   M  K I  D +T +I+
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               CR   +  AF    ++ +     +  ++N L+N LC    +  A +L+  M++   
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +PD+IT  T+++G C    +  AV +   M     +PN   Y  I+N +CK  +  +A  
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 521 LLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           LL+  +   +    +TY  +I+    +G++ +A + FSEM   GI  N   YN LI   C
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
            FG +    +L++ MI   I P+ VT++ L+    K     E  +L+++M+  G+ P+  
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371

Query: 640 TYNAIISPLLGEKSAED 656
           TYN++I  L  +K  ++
Sbjct: 372 TYNSLIYGLCNDKRLDE 388


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 248/468 (52%), Gaps = 4/468 (0%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           ++++ KG    +   +  ++    L ++   + +  +++  GY  N    N ++  LC +
Sbjct: 34  KQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLK 93

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +++++L  + +++  G   + V + +++N  C++G+   A+KL R    +   S  P+ 
Sbjct: 94  GEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLR---TIEDRSTRPDV 150

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           V ++ II+G CK   V+ A ++   M   GI  +V TY TLI G+   G   EA  L +E
Sbjct: 151 VMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNE 210

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+ + + PN   YN+ I  L  EG V+ +  +L+ M  K + PD   YSIL  G C  G 
Sbjct: 211 MILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGE 270

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V++A ++   +++  +  D YSYNI+IN LCK   +  A  LL  M+ + +IPD +TY +
Sbjct: 271 VQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSS 330

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG CK G I   + + + M    +  NLV YNS+++GLCK+ +LD A +L    +  G
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  +  TY  LI+G    G++ +  A+F  +   G  ++   Y ++I+ LCK G + +A 
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEAL 450

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            +   M  +G IP+ VT+  ++    +    ++  +L  +M+  G+ P
Sbjct: 451 AMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 245/485 (50%), Gaps = 11/485 (2%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           H   I  +   L  LVK+        L K+M + G V ++ T +++I   C   ++  + 
Sbjct: 6   HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           S+  ++LK G  PN +  N ++   C  G+++ +L    K+ V  G  +  + V++  ++
Sbjct: 66  SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKV-VAQGFQM--DQVSYGILL 122

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           NG CK+G    A ++   +       +V  Y+T+IDG  +    +EA  L  EM  RG+ 
Sbjct: 123 NGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIF 182

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ + Y + I      G +  A  +L++MI K+I P+ +TY+ L   LC+ G VK++  L
Sbjct: 183 PDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNL 242

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
              + ++ +  D   Y+IL++  C    +  AKQ+   M+  G+ PD+ +Y  +I+G CK
Sbjct: 243 LAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCK 302

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK----DASLDAAKSLLQASQRIGLLD 532
           G  ++ A+ +   M      P+ V Y+S+I+GLCK       LD  K +    Q   L  
Sbjct: 303 GKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANL-- 360

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +TYN+L++G   N  + +A A+F +M+  GI  NK  Y  LI+ LCK G  ++ + L +
Sbjct: 361 -VTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQ 419

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            +++ G   D  TYT +++   K    +E + +   M  +G  P+  T+  II  LL EK
Sbjct: 420 HLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLL-EK 478

Query: 653 SAEDQ 657
              D+
Sbjct: 479 DENDK 483



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 229/451 (50%), Gaps = 4/451 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+     +G    ++ V+ K+   G+  +    N  +  L    E+ +    + ++V+ G
Sbjct: 51  LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQG 110

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +  +  ++ +++  LCK  +   A+ L   +      P+VV ++ II+  C+   ++ A 
Sbjct: 111 FQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAY 170

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            L+ +   M+   + P+ +T+  +I GFC  G++  A  +   MI   I+ N+ TY TLI
Sbjct: 171 DLYSE---MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLI 227

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           D   + G  +E+  L   M K+G+ P+ V+Y+  +      G+V+ A  +   M+   + 
Sbjct: 228 DTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN 287

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD ++Y+I+  GLC+   V +A  L  ++L ++M+ D  +Y+ LI+ LCK   +     L
Sbjct: 288 PDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDL 347

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M  RG   +++TY +L+DG CK  N++ A+ ++  MK+   +PN   Y ++I+GLCK
Sbjct: 348 TKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 407

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              L   ++L Q     G  +D  TY  +I+G    G   EA AM S+M + G   N V 
Sbjct: 408 GGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVT 467

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIP 601
           + I+I  L +     +A +L+  MI  G++P
Sbjct: 468 FEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 151/331 (45%), Gaps = 40/331 (12%)

Query: 134 GLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GLL+   +    P ++  + L+    + G  + + +++  +  KG    +  ++  +   
Sbjct: 206 GLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGY 265

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
             + E+ +  +++  MV  G   +V ++N++I  LCK  +++EA++L   ML   + P+ 
Sbjct: 266 CLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDT 325

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           V ++ +I+  C++G +   L L ++M      +   N VT+N +++G CK   ++ A  +
Sbjct: 326 VTYSSLIDGLCKLGRITTILDLTKEMHHRGQPA---NLVTYNSLLDGLCKNQNLDKAIAL 382

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M + GI  N  TY  LIDG  +GG  ++   L   ++ +G   +   Y   I  L  
Sbjct: 383 FMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           EG  + AL + S M D                   NGC+                 +A +
Sbjct: 443 EGMFDEALAMKSKMED-------------------NGCIP----------------NAVT 467

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           + I+I  L + +    A++LL  MI +GL+P
Sbjct: 468 FEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 242/447 (54%), Gaps = 4/447 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+  +++   + +V  FN+++ ++ K      A+SL  +M   GI P++V  +++IN  C
Sbjct: 65  LFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYC 124

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G + FA   F  +G++       N++T   I+ G C  G V  A E   +++  G   
Sbjct: 125 HLGHMGFA---FSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLL 181

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY TLI+G  + G + EA  L  +M  + + PN V+YN  +  L  +G V  A  + 
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           SD++ + I PD FTY+ L  G C  G  ++  +L   +++ ++  + Y+YNILI+ LCK 
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  A  + + MI RG  PD++T+ TL+ GYC   ++  A ++++   +    P++  Y
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSY 361

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +I G CK+  +D A SL        L  + +TY++LI+G   +G+I+ A+ +FS + +
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHD 421

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G + N + YNI+++ LCK     +A EL  +M   G+ P+  +Y  L+  + K+   +E
Sbjct: 422 GGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDE 481

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
            + L ++M    + PD+ TYN +I  L
Sbjct: 482 AMNLFEEMHRRNLVPDSVTYNCLIDGL 508



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/473 (31%), Positives = 235/473 (49%), Gaps = 6/473 (1%)

Query: 146 PAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P+V  F+ ++ +  ++     A  + +++ ++G + SI   +  ++    L  +G  + +
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
              ++  GY  N  T   ++  LC   ++ +AL  +  ++  G   + V +  +IN  C+
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G    A +L  KM    G  V PN V +N I++G CK G V  A ++   ++  GID +
Sbjct: 196 IGLTREAFELLHKM---EGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPD 252

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY  LI G+   G   E  RL  +MV R +  N   YN  I  L  +G +  A  + +
Sbjct: 253 VFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRN 312

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            MI++   PD  T++ L  G C    V +A KL +   E  +  D +SYNILI   CK+N
Sbjct: 313 LMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNN 372

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  L + M  + L P+I+TY +LIDG CK G I  A +++  +      PN++ YN
Sbjct: 373 RIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYN 432

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +++ LCK   +D A  L       GL   + +YN LINGY  + +I EA  +F EM   
Sbjct: 433 IMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRR 492

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            +  + V YN LI+ LCK G    A EL  VM   G   D +TY  L   FSK
Sbjct: 493 NLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 229/439 (52%), Gaps = 6/439 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP++     L+     +G    A+ V+  +  +G+ ++       +  L    E+ +  +
Sbjct: 110 TPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALE 169

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            +  +V+ G++ +  T+  +I  LCK     EA  L ++M    + PNVV +NMI++  C
Sbjct: 170 FHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLC 229

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +  A  L+     + G  + P+  T+ C+I+GFC LG+      +   M+   ++ 
Sbjct: 230 KDGLVTEARDLYSD---VVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL 286

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY  LID   + G   +A  + + M++RG  P+ V +N+ +       DV  A  + 
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
               +  I PD ++Y+IL  G C+N  + +A  L N++  + +  +  +Y+ LI+ LCKS
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS 406

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             ++ A +L S++   G  P++ITY  ++D  CK   ++ A++++  M +    PN+  Y
Sbjct: 407 GRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSY 466

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +ING CK   +D A +L +   R  L+ D++TYN LI+G   +G+I+ A+ +F+ M +
Sbjct: 467 NILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHD 526

Query: 562 VGIAVNKVGYNILINFLCK 580
            G  V+ + YNIL +   K
Sbjct: 527 GGPPVDVITYNILFDAFSK 545



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 229/485 (47%), Gaps = 4/485 (0%)

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
           A + A  +  +L       S+  +N  L  +VK+        L K+M   G   ++ T +
Sbjct: 58  AIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLS 117

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           ++I   C    +  A S+   +LK G   N +    I+   C  G++  AL+ F    V 
Sbjct: 118 ILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALE-FHDSVVA 176

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
            G   L + VT+  +ING CK+G    A E+ + M    +  NV  Y  ++DG  + G  
Sbjct: 177 QG--FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLV 234

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
            EA  L  ++V RG+ P+   Y   IH     G       +L DM+D+++  + +TY+IL
Sbjct: 235 TEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNIL 294

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              LC+ G + +A  + N ++E     D  ++N L++  C  N++  A++L  +    G+
Sbjct: 295 IDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI 354

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD+ +Y  LI GYCK   I+ A+ ++  M   +  PN+V Y+S+I+GLCK   +  A  
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWE 414

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L  A    G   + ITYN +++       + +A  +F+ M   G+  N   YNILIN  C
Sbjct: 415 LFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYC 474

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K     +A  L + M    ++PD VTY  L+    K+       EL + M   G   D  
Sbjct: 475 KSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVI 534

Query: 640 TYNAI 644
           TYN +
Sbjct: 535 TYNIL 539



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 219/428 (51%), Gaps = 4/428 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A++L+ R++     P+VV FNMI+    ++     A+ L ++MG+     + P+ VT
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRG---ITPSIVT 115

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            + +IN +C LG + FA  +   ++K G   N  T  T++ G    G   +AL   D +V
Sbjct: 116 LSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +G + + V Y + I+ L   G    A  +L  M  + + P+   Y+++  GLC++G V 
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L++ V+   +  D ++Y  LI+  C         +LL  M+ R +  ++ TY  LI
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D  CK G +  A  +   M +  ++P+LV +N++++G C    +  A+ L       G+ 
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  +YN LI GY  N +I EA ++F++M    +A N V Y+ LI+ LCK G    A EL
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              +   G  P+ +TY  ++    K    ++ IEL + M   G++P+  +YN +I+    
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475

Query: 651 EKSAEDQV 658
            K  ++ +
Sbjct: 476 SKRIDEAM 483



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 165/337 (48%), Gaps = 3/337 (0%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           ++ +    +++ +V    + G    A D+   +  +G    +  +   +     L +   
Sbjct: 212 QVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWRE 271

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             +L  +MV      NV T+N++I ALCK+  L +A  +   M++ G  P++V FN +++
Sbjct: 272 VTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMS 331

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C   D+  A KLF      +   + P+  ++N +I G+CK  R++ A  +   M    
Sbjct: 332 GYCLYNDVVEARKLF---DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK 388

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N+ TY++LIDG  + G    A  L   +   G  PN + YN  +  L     V+ A+
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAI 448

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + + M ++ + P+  +Y+IL  G C++  + +A  L  ++   ++V D+ +YN LI+ L
Sbjct: 449 ELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGL 508

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
           CKS  ++ A +L + M   G   D+ITY  L D + K
Sbjct: 509 CKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 57/137 (41%)

Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           DA  DA     +      L   + +N ++           A ++  +M   GI  + V  
Sbjct: 57  DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           +ILIN  C  G    A  ++ +++  G   + +T TT++     N    + +E HD +V 
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176

Query: 632 SGVSPDNQTYNAIISPL 648
            G   D  TY  +I+ L
Sbjct: 177 QGFLLDEVTYGTLINGL 193


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 259/544 (47%), Gaps = 43/544 (7%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           T  + DA + A  ++     A  ++  L+ + G   S+ A N  LS L +         L
Sbjct: 134 TSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASL 193

Query: 204 --YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             ++ ++      N  TFNL+++  C +  L +AL+    M   G+ P+ V +N ++N  
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L  A  L  +M     D + P   T+N +++ F +LG ++ A ++  +M   G +
Sbjct: 254 CRKGMLGEARALLARM---KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL-MPNNVVYNSTIHWLFAEGDVEGALF 380
            ++RTY  L  G  + G  +EA RL DEM + G  +P+ V YN+ +   F       AL 
Sbjct: 311 PDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALR 370

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L +M DK + P   T++I+ K LC+ G +++A     ++ EE +  D  +YN LI+  C
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430

Query: 441 KSNNLAAA-----------------------------------KQLLSSMIVRGLIPDII 465
           K+ N+A A                                   ++LL S   RG +PD +
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEV 490

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           +YGT++  Y K  N E A+++++ M + +  P++  YN++I GLC+   L  A   L   
Sbjct: 491 SYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEF 550

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              GL+ D  TYN +I+ Y   G +  AF   ++M       + V  N L+N LC  G  
Sbjct: 551 VEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKL 610

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +A +L +  +  G   D +TY TL+    K    +  +   DDM + G+ PD  TYN +
Sbjct: 611 DKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVV 670

Query: 645 ISPL 648
           +S L
Sbjct: 671 LSAL 674



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 234/470 (49%), Gaps = 14/470 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVS-IHAWNNFLSHLVKLNEIGRFWKLYKE 206
            ++ L     Q G  + A+ +  +++  G ++  +  +N  +    K        +L +E
Sbjct: 315 TYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEE 374

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G    + T N+V+ +LCKE KLEEAL    ++ + G+ P+V+ +N +I+  C+ G+
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +    K F  M  M G  +  ++ T N ++   CK+ R E AEE+ ++  + G   +  +
Sbjct: 435 VA---KAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVS 491

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y T++  Y +  + E ALRL D+M++R L+P+   YN+ I  L     ++ A+  L++ +
Sbjct: 492 YGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFV 551

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K + PD  TY+I+    C+ G ++ AF+ HN+++E     D  + N L+N LC    L 
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLD 611

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L  S + +G   D+ITY TLI   CK G+++ A+  +++M+    +P+   YN ++
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVL 671

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           + L +    + A ++L      G L       L+     +    EA     E +    + 
Sbjct: 672 SALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSAD----EADVKEHEGKPEAESS 727

Query: 567 NKVGYNIL------INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            K   N L      +N LC  G  ++A+ ++  M+  G+  D  TY TL+
Sbjct: 728 EKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLM 777



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 183/399 (45%), Gaps = 40/399 (10%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDGYARGGSS--EEA 343
           P S   +  ++ + +L     A ++ +++ +  G+  +++    ++   +R  S+  + +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           L +   +++  L PN+  +N  +H   ++G +  AL  LS M    + PD  TY+ L   
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            CR G + +A  L  ++  + +     +YN L++   +   +  A +++ SM   G  PD
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 464 IITYGTLIDGYCKGGNIE------------------------------------GAVQVY 487
           + TY  L  G C+ G ++                                     A+++ 
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           E M+    KP LV +N ++  LCK+  L+ A   L+     GL  D ITYNTLI+ Y   
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G +A+AF +  EM   G+ ++    N ++  LCK   Y+ A EL+      G +PD V+Y
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            T++  + K  +PE  + L D M+   + P   TYN +I
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 156/309 (50%), Gaps = 4/309 (1%)

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDV--EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           +RG+ P+    N+ +  L        + +L V   +I+  + P+H+T+++L    C  G 
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A    + +    +  DA +YN L+N  C+   L  A+ LL+ M   G+ P   TY T
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+  + + G I+ A +V E+M     +P+L  YN +  GLC+   +D A  L    +R+G
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 530 --LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
             L D +TYNTL++  F     ++A  +  EMR+ G+    V +NI++  LCK G  ++A
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
              ++ +   G+ PD +TY TL+  + K  +  +   L D+MV  G+  D  T N ++  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 648 LLGEKSAED 656
           L   K  ED
Sbjct: 464 LCKMKRYED 472



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/219 (19%), Positives = 90/219 (41%), Gaps = 33/219 (15%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++ A  + G  E A+    K+        +   N  ++ L    ++ +  KL++  
Sbjct: 561 TYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW 620

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   +V T+N +I ++CK   ++ AL  +  M   G+ P+   +N++++   + G  
Sbjct: 621 VEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRS 680

Query: 268 EFALKLFRKM---GVMSGDSVLP------------------------NSVTHNCI----- 295
           E A  +  K+   G +S     P                             N +     
Sbjct: 681 EEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYME 740

Query: 296 -INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            +NG C  G+++ A+ +   M++ G+  +  TY TL++G
Sbjct: 741 RLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEG 779


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 232/480 (48%), Gaps = 5/480 (1%)

Query: 181 IHAWNNFLSHLVKLNEI-GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           I  +N  LS +V++ +       L K+M   G   N  T N++I   C    ++   S+ 
Sbjct: 90  IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVL 149

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +++K G+ P ++ F  +IN  C+ G+   AL+LF  M V  G    P+  T+  IING 
Sbjct: 150 AKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDM-VARG--CQPDVYTYTTIINGL 206

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A  +   M + G   +V TY+TLID   +     EAL +   M  +G+ P  
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V Y S I  L +    + A  +L++M   +I PD  T+S+L    C+ G V +A  +   
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKT 326

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E  +  +  +YN L++       +  A++L   MI RG  PD+ +Y  LI+GYC    
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           I+ A Q++  M      PN V Y ++I+  C+   L  A+ L +     G L D  TY+ 
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L+ G+   G + +AF +F  M+   +  N V Y ILI+ +CK G    AR+L   + +HG
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + PD   YTT++    K    +E +E    M   G  P+  +YN II   L  K     V
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 566



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 211/418 (50%), Gaps = 3/418 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++AL+ +  ML     P ++ FN +++   ++     A+    K   ++G S  PN+ T
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLS--PNTCT 128

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC +  V+    +   +IK G+   + T+ TLI+G  + G   +AL L D+MV
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            RG  P+   Y + I+ L   G+   A  ++  M +    PD  TYS L   LC++  V 
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  + + +  + +     SY  LI  LC  +    A  +L+ M    ++PDI+T+  LI
Sbjct: 249 EALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLI 308

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           D +CK GN+  A  V + M ++  +PN++ YNS+++G      +  A+ L       G  
Sbjct: 309 DIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCK 368

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  +Y+ LINGY +  +I EA  +F+EM + G+  N V Y  LI+  C+ G  ++AREL
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            K M  +G +PD  TY+ L+  F K     +   L   M  + + P+   Y  +I  +
Sbjct: 429 FKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 218/474 (45%), Gaps = 37/474 (7%)

Query: 166 YDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
           YD +    +++++ G S +    N  ++    +  +   + +  +++  G    + TF  
Sbjct: 107 YDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTT 166

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG--- 278
           +I  LCK  +  +AL L+  M+  G  P+V  +  IIN  C++G+   A  L +KMG   
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVG 226

Query: 279 -----------------------------VMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
                                         M    + P  V++  +I G C   R + A 
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEAS 286

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +   M    I  ++ T++ LID + + G+  EA  +   M + G+ PN + YNS +H  
Sbjct: 287 AMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY 346

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             + +V  A  +   MI +   PD F+YSIL  G C    + +A +L N+++ + +  + 
Sbjct: 347 SLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            SY  LI+  C+   L  A++L   M   G +PD+ TY  L++G+CK G +  A +++  
Sbjct: 407 VSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRA 466

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M+    KPNLV+Y  +I+ +CK  +L+ A+ L       GL  D   Y T+ING    G 
Sbjct: 467 MQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGL 526

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           + EA   F +M   G   N+  YN++I    +     +A +L+  M   G + D
Sbjct: 527 LDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 211/427 (49%), Gaps = 4/427 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   F  L+    + G    A ++   +  +G    ++ +   ++ L K+ E      
Sbjct: 158 QPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAG 217

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L K+M   G   +V T++ +I +LCK+  + EAL ++  M   GI P VV +  +I   C
Sbjct: 218 LIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLC 277

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                + A  +  +M  ++   ++P+ VT + +I+ FCK G V  A+ +   M + G++ 
Sbjct: 278 SFSRWKEASAMLNEMTSLN---IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP 334

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY +L+ GY+      EA +L D M+ RG  P+   Y+  I+       ++ A  + 
Sbjct: 335 NVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLF 394

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++MI + + P+  +Y+ L    C+ G +++A +L   +     + D  +Y++L+   CK 
Sbjct: 395 NEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQ 454

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  A +L  +M    L P+++ Y  LID  CK GN+  A +++  +     +P++ IY
Sbjct: 455 GYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIY 514

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            +IINGLCK+  LD A    +  +  G   +  +YN +I G+  +   + A  +  EMR+
Sbjct: 515 TTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRD 574

Query: 562 VGIAVNK 568
            G   ++
Sbjct: 575 KGFVADE 581



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 191/381 (50%), Gaps = 3/381 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  ++    ++G T  A  +I+K+   G    +  ++  +  L K   +    
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            ++  M + G    V ++  +I  LC   + +EA ++   M    I P++V F+++I+  
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G++  A  + + M  M    V PN +T+N +++G+     V  A ++   MI  G  
Sbjct: 312 CKEGNVLEAQGVLKTMTEMG---VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCK 368

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V +Y+ LI+GY      +EA +L +EM+ +GL PN V Y + IH     G +  A  +
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             DM      PD  TYS+L +G C+ G + +AF+L   +   ++  +   Y ILI+ +CK
Sbjct: 429 FKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCK 488

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S NL  A++L S + V GL PD+  Y T+I+G CK G ++ A++ +  M++    PN   
Sbjct: 489 SGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFS 548

Query: 502 YNSIINGLCKDASLDAAKSLL 522
           YN II G  +      A  L+
Sbjct: 549 YNVIIRGFLQHKDESRAVQLI 569



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 166/361 (45%), Gaps = 34/361 (9%)

Query: 57  SLTNSLV-NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           +L +SL  +R+V+E       AL+ ++++      S ++ S  +++  L ++ R+ +A  
Sbjct: 236 TLIDSLCKDRLVNE-------ALDIFSYMKAKG-ISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALVRACTQIGATEGA--------- 165
           ++  + S N +  +     L+D +  CK    +    +++  T++G              
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIF--CKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345

Query: 166 ----YDVIQKLKV------KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
                +V++  K+      +G    + +++  ++    +  I    +L+ EM+  G   N
Sbjct: 346 YSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
             ++  +I+A C+  KL EA  L+  M  +G  P++  +++++   C+ G L  A +LFR
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
               M G  + PN V +  +I+  CK G +  A ++   +   G+  +V+ Y T+I+G  
Sbjct: 466 ---AMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC 522

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  +EAL    +M + G  PN   YN  I       D   A+ ++ +M DK    D  
Sbjct: 523 KEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEG 582

Query: 396 T 396
           T
Sbjct: 583 T 583


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 268/523 (51%), Gaps = 23/523 (4%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F+E  + +Y+   + PA FD L+           +  ++++L+  G S S  A N  LS 
Sbjct: 189 FVEHYISTYKTFSSDPASFDFLLLCLP-------SAPLLRRLRQYGISPSPEACNAVLSR 241

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L  L+E     +L++E+      +NV ++N+++ ALC   ++++A  L+  M  +   P+
Sbjct: 242 L-PLDEA---IELFQELPH----KNVCSYNILLKALCDAGRVKDARQLFDEMASA---PD 290

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV + ++I+  C +G+LE A+KL  +M V  G  V PN+  +  ++   C  G +  A  
Sbjct: 291 VVTYGILIHGHCALGELENAVKLLDEM-VAGG--VEPNATVYTSVVALLCDKGWISDALR 347

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M++  +  +   Y T++ G+   G    A R  DEM ++GL  + V Y + I+ L 
Sbjct: 348 VVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLC 407

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
              ++E A  +L +M  + +  D  TY++L  G C+ G + +AF++HN +++  +  +  
Sbjct: 408 RAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVV 467

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  L + LCK  ++ AA +LL  M  +GL  +  TY +LI+G CK G +E A++   +M
Sbjct: 468 TYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADM 527

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
                KP++  Y ++I+ LCK   LD A SLLQ     G+   I TYN L+NG+ ++G++
Sbjct: 528 DTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 587

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
                +   M    I  N   YN L+   C     +   E+ K M    + P+  TY  L
Sbjct: 588 EGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNIL 647

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    K  + +E +  HD+M+  G      +Y+A+I  LL +K
Sbjct: 648 IKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIR-LLNKK 689



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 208/415 (50%), Gaps = 6/415 (1%)

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           L E+    KL  EMV+ G   N   +  V+  LC +  + +AL +   M++  +  +   
Sbjct: 304 LGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEAL 363

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +++  C  GDL  A + F +M       +  + VT+  +ING C+   +E AE++  
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEM---QRKGLATDGVTYTTMINGLCRAVELEEAEKLLQ 420

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M    +D +  TY  LIDGY + G   EA ++ + MV+RG+ PN V Y +    L  +G
Sbjct: 421 EMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQG 480

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           DV+ A  +L +M +K +  +  TY+ L  GLC+ G ++QA +    +    +  D Y+Y 
Sbjct: 481 DVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYT 540

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+ LCKS +L  A  LL  M+ +G+ P I+TY  L++G+C  G +EG  ++ + M + 
Sbjct: 541 TLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEK 600

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAE 551
              PN   YNS++   C + ++ +   + +   S+ +G  +  TYN LI G+     + E
Sbjct: 601 NIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG-PNENTYNILIKGHCKARNMKE 659

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           A     EM   G  +    Y+ LI  L K   + +AREL   M   G+  +   Y
Sbjct: 660 ALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVY 714



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 165/401 (41%), Gaps = 54/401 (13%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP--------------AVF 149
           LV+ RR+ D +   G  ++ + V+    + GL  + E+ +A                  +
Sbjct: 377 LVSARRWFDEMQRKG--LATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
             L+    + G    A+ +   +  +G + ++  +      L K  ++    +L  EM +
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   N  T+N +I  LCK   LE+A+     M  + + P+V  +  +I+  C+ GDL+ 
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A  L ++M       + P  VT+N ++NGFC  GRVE  +++   M++  I  N  TY +
Sbjct: 555 AHSLLQEM---LDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+  Y    + +    +   M  R + PN   YN                          
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYN-------------------------- 645

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
                    IL KG C+   +K+A   H++++++     A SY+ LI  L K      A+
Sbjct: 646 ---------ILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAR 696

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +L   M   GL  +   Y   ID      N+E  + + + +
Sbjct: 697 ELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDEL 737


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 227/437 (51%), Gaps = 5/437 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V ++  VI  L    +++EA  L+ ++  +G  PNVV +  +I+   + G +E  LK F
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
             M   SG S +P   T+  +I+G CK   +  A ++   M++ G   +  TY TLIDG+
Sbjct: 422 EDM---SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 478

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           ++    +EA +L D M+ +G  P  V Y S +H       +  A  V++ M ++   P  
Sbjct: 479 SKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGL 538

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           F ++ L       G  ++A+++  ++       D   Y  LI+ L  +  +  A+ +  S
Sbjct: 539 FIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDS 598

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           MI +G  PD +TYGT+I  + K GN+E A ++ E M K    P+   YNS+++G  K   
Sbjct: 599 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 658

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM-RNVGIAVNKVGYN 572
           +D A  +       G+  +A+T+N L++G F +GK   AF++F EM     +    V Y 
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           ILI+ L K G   +A    + MI  GIIP+  TYT+L+   +K     E  +L +DMV  
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 778

Query: 633 GVSPDNQTYNAIISPLL 649
           GV+PD Q Y+A+I+ L+
Sbjct: 779 GVNPDVQAYSALITGLI 795



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 258/537 (48%), Gaps = 22/537 (4%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           +L+     AN +     L  LL SY  CK   A +  ++         +G YD  +  + 
Sbjct: 304 ILVAGFSRANRLDDALELFKLLSSYG-CKPNAATYTTII---------QGLYDAQRMEEA 353

Query: 175 KG---HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           K     ++ + ++   +  L     I    +L++++ + G   NV  +  VI  L K  +
Sbjct: 354 KAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +E+ L  +  M  S   P    + ++I+  C+   L  A K+F +M V  G   +P+++T
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQM-VQKG--CVPDTIT 470

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +I+GF K  +++ A ++   M+  G +    TY +++ G+ +     EA  +  +M 
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +RG  P   ++ S + +  ++G  E A  VL++M  +   PD   Y+ L   L   G V 
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  + + ++E+    DA +Y  +I    K  N+ AA ++L  M   G+ PD   Y +L+
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQR 527
           DGY K   ++ A  VY+ M     KPN V +N +++GL KD   D A    K +L+  + 
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
              L  ++Y  LI+G    G+++EAF+ F EM + GI      Y  LI  L K G   +A
Sbjct: 711 PPTL--VSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           ++L++ M+  G+ PD   Y+ L+T    +   +   ++  +M+  G +P+  TY  +
Sbjct: 769 KKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/607 (25%), Positives = 292/607 (48%), Gaps = 36/607 (5%)

Query: 56  PSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           P + + L+N+ +  FR  P + L  YT V         +   C    L   ++  ++ +L
Sbjct: 106 PQVGHMLLNQALKRFR--PDVFL--YTSV---------IHGYCKAGDLDTGFKILEE-ML 151

Query: 116 LMGNLMSANS----VSPLEFLEGLLDSYEI--------CKATPAVFDALVRACTQIGATE 163
             G +  A +    + PL  L  + ++YE+        C      F  L+ A +  G  +
Sbjct: 152 AAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLD 211

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A ++ +++  +G+   +   ++ +  L K  ++    ++Y+ +V+     +   +N ++
Sbjct: 212 EACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLM 271

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
              CK  ++++ L L  +M++   +P++  +N+++    +   L+ AL+LF+   ++S  
Sbjct: 272 DGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFK---LLSSY 328

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
              PN+ T+  II G     R+E A+    A     +D  V +Y T+I G A     +EA
Sbjct: 329 GCKPNAATYTTIIQGLYDAQRMEEAK----AFFDEALD--VISYTTVIKGLADSKRIDEA 382

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             L +++   G  PN V Y + I  L   G +E  L    DM      P   TY+++  G
Sbjct: 383 CELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDG 442

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+   +  A K+  Q++++  V D  +Y  LI+   K++ +  A++LL  M+ +G  P 
Sbjct: 443 LCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPT 502

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN-GLCKDASLDAAKSLL 522
            +TYG+++ G+CK   I  A +V   M++   +P L I+ S+++  L K  + +A + L 
Sbjct: 503 AVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLT 562

Query: 523 QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           + + R    D I Y +LI+  F  G++ EA  +F  M   G A + + Y  +I    K G
Sbjct: 563 EMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 622

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             + A E++++M   G+ PD   Y +L+  + K    ++   ++D MV SG+ P+  T+N
Sbjct: 623 NVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN 682

Query: 643 AIISPLL 649
            ++  L 
Sbjct: 683 VLMHGLF 689



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 238/525 (45%), Gaps = 58/525 (11%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A D ++++   G    +   N  L+ L K  +I +  +L+ EM S G    + ++N V
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD-------LEFALKLFR 275
           I  L    K++EA   +  M+ +G  P+V+ F  +I+  C+ G        L  ALK FR
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
                      P+   +  +I+G+CK G ++   +I   M+ AG   +   Y  LID   
Sbjct: 122 -----------PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLC 170

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  +EA  L + M K G + + V + + I  L   G ++ A  +  +MI++   P   
Sbjct: 171 KLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLE 230

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
               L   LC+ G V +A +++  V+ + +     +YN L++  CK   +    +LL  M
Sbjct: 231 VQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           +     PDI TY  L+ G+ +   ++ A+++++ +     KPN   Y +II GL     +
Sbjct: 291 VECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRM 350

Query: 516 DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG----- 570
           + AK+    +     LD I+Y T+I G   + +I EA  +F +++  G + N V      
Sbjct: 351 EEAKAFFDEA-----LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVI 405

Query: 571 ------------------------------YNILINFLCKFGCYQQARELMKVMILHGII 600
                                         Y ++I+ LCK      A ++ + M+  G +
Sbjct: 406 DGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV 465

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           PD +TYTTL+  FSK    +E  +L D M+  G  P   TY +I+
Sbjct: 466 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 240/522 (45%), Gaps = 34/522 (6%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A ++  ++   G   +I ++N  +S L  ++++   +K +  M+  G   +V  F  +I+
Sbjct: 39  AIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIH 98

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             CK  + +    L  + LK    P+V  +  +I+  C+ GDL+   K+  +M + +G  
Sbjct: 99  GFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEM-LAAG-- 154

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
            +P++  +  +I+  CKLGRV+ A E+   M K+G   +  T+ TLI+  +  G  +EA 
Sbjct: 155 CIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEAC 214

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  EM++RG  P   V +S I  L   G V+ A  +   ++ K +      Y+ L  G 
Sbjct: 215 ELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGY 274

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS----------- 453
           C+ G V    KL  Q++E     D  +YNIL+    ++N L  A +L             
Sbjct: 275 CKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334

Query: 454 ---SMIVRGLIP---------------DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
              + I++GL                 D+I+Y T+I G      I+ A +++E +K    
Sbjct: 335 ATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGC 394

Query: 496 KPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
            PN+V Y ++I+GL K   + D  K+    S    +    TY  +I+G      + +A  
Sbjct: 395 SPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK 454

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F +M   G   + + Y  LI+   K     +AR+L+ VM+  G  P  VTY ++V  F 
Sbjct: 455 VFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFC 514

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           K     E  E+   M   G  P    + +++S  L +  AE+
Sbjct: 515 KLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 209/426 (49%), Gaps = 11/426 (2%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +EEAL     M  +G+ P+VV  N+++N  C+   ++ A++LF +M  M  +   P  V+
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCE---PTIVS 57

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I+G   + +++ A +   +MI  G + +V  + TLI G+ + G  +    L ++ +
Sbjct: 58  YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL 117

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KR   P+  +Y S IH     GD++    +L +M+     PD   Y +L   LC+ G V 
Sbjct: 118 KR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A++L  ++ +   +GD  ++  LI  L     L  A +L   MI RG  P +    +LI
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-KSLLQASQRIGL 530
              CK G ++ A ++Y+ +   +   + V YNS+++G CK   +D   K LLQ  +    
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNF 296

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TYN L+ G+    ++ +A  +F  + + G   N   Y  +I  L      ++A+  
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
               +      D ++YTT++   + +   +E  EL + +  +G SP+   Y A+I  LL 
Sbjct: 357 FDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK 410

Query: 651 EKSAED 656
               ED
Sbjct: 411 AGRIED 416



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 174/369 (47%), Gaps = 4/369 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+   ++    + A  ++  +  KG   +   + + +    KL+ I    
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++  +M   G    +  F  ++     + + EEA  +   M   G  P+V+ +  +I+  
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G +  A  +F  M +  G    P+++T+  II  F K+G VE A EI   M K+G+ 
Sbjct: 584 FSTGRVPEARHVFDSM-IEKG--CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVG 640

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +   Y +L+DGY +    ++A  + D MV  G+ PN V +N  +H LF +G  + A  +
Sbjct: 641 PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSL 700

Query: 382 LSDMIDK-HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
             +M++K  + P   +Y+IL  GL + G V +AF    ++++  ++ + ++Y  LI  L 
Sbjct: 701 FKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLA 760

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  AK+L+  M+  G+ PD+  Y  LI G      ++ A  V++ M K    PN V
Sbjct: 761 KAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 820

Query: 501 IYNSIINGL 509
            Y  +  G 
Sbjct: 821 TYKVLRRGF 829



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 185/402 (46%), Gaps = 6/402 (1%)

Query: 81  YTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY- 139
           YT V +    +  L  +C +   +V      D +     +   +  S ++    LLD   
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 495

Query: 140 -EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
            +  + T   + ++V    ++     A +VI +++ +G    +  + + LS+ +      
Sbjct: 496 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 555

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             +++  EM + G   +V  +  +I  L    ++ EA  ++  M++ G  P+ + +  II
Sbjct: 556 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 615

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
               ++G++E A ++     +M+   V P+   +N +++G+ KL RV+ A  +   M+ +
Sbjct: 616 QNFSKIGNVEAAGEILE---LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 672

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV-YNSTIHWLFAEGDVEG 377
           GI  N  T+  L+ G  + G ++ A  L  EM+++  +P  +V Y   I  L   G V  
Sbjct: 673 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSE 732

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A     +MID+ I P+  TY+ L   L + G + +A KL   +++  +  D  +Y+ LI 
Sbjct: 733 AFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALIT 792

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
            L  S+ +  A  +   M+ RG  P+ +TY  L  G+   G 
Sbjct: 793 GLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 834



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 8/279 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     ++ +L+      G    A  V   +  KG +     +   + +  K+  +    
Sbjct: 569 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAG 628

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++ + M   G   +   +N ++    K  ++++A  +Y RM+ SGI PN V FN++++  
Sbjct: 629 EILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGL 688

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G  + A  LF++M  +  D V P  V++  +I+G  K GRV  A      MI  GI 
Sbjct: 689 FKDGKTDRAFSLFKEM--LEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGII 746

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
               TY +LI   A+ G   EA +L ++MVK G+ P+   Y++ I  L     V+ A  V
Sbjct: 747 PECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDV 806

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNG------CVKQAF 414
             +M+ +   P+  TY +L +G    G       VKQ F
Sbjct: 807 FQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHF 845


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 243/477 (50%), Gaps = 4/477 (0%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           I  +N  L+ LV++        +Y++M   G   +V T  ++I  LC    +    S+  
Sbjct: 104 ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLG 163

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           ++ K G  P+++ FN +IN  C  G +  A++   ++  +      P   TH  I+NG C
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAME---QLDYIMSRGYQPTVYTHTMIVNGLC 220

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K+G+   A      M++   +  V +Y+ +ID   +     EA+ L   M   G+ P  V
Sbjct: 221 KIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVV 280

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YNS I+ +   G  + A  +  +M++ ++ PD  T+SIL   LC+ G V +A  +  ++
Sbjct: 281 TYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKM 340

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           ++  M  D  +Y+ LI+ +CKS+    +  LL+ M+ R + PD++T+   +D +CK G +
Sbjct: 341 IQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
             A  +   M +   +PN+V YNS+++G C  + +D A+ +       G   D ++YN L
Sbjct: 401 SEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNIL 460

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I GY  + +I EA  +F EM + G+  N + +  LI+ LC+ G    A+EL K M  HG 
Sbjct: 461 IKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGC 520

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            PD +TY+TL++ F K+   +E + L + +  S + P++     ++  +      ED
Sbjct: 521 PPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLED 577



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 249/490 (50%), Gaps = 4/490 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+ A  ++   +    + +K++  G S S++     ++ L  L+ +G  + +  ++ 
Sbjct: 107 FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIF 166

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G+  ++ TFN +I  LC E ++ EA+     ++  G  P V    MI+N  C++G   
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTS 226

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+   +KM  +  +   P  V+++ II+  CK   V  A ++ Y M   GI   V TY 
Sbjct: 227 AAIVWMKKMVELDCE---PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LI G    G  ++A  L  EM++  + P+ V ++  +  L  EG V  AL V   MI  
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI 343

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD  TYS L  G+C++   K++  L N++L  ++  D  +++I ++  CK   ++ A
Sbjct: 344 AMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEA 403

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           + +++ MI RGL P+++TY +L+DGYC    ++ A +V++ M      P+++ YN +I G
Sbjct: 404 QSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            CK   +D AK L       GL  ++IT+ TLI+G    G+   A  +F +M + G   +
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ L++  CK G   +A  L + +    + P++V    L+    K    E+  EL  
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFS 583

Query: 628 DMVLSGVSPD 637
            + +  + PD
Sbjct: 584 SLSIEELQPD 593



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 215/418 (51%), Gaps = 4/418 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K +   F+ L+      G    A + +  +  +G+  +++     ++ L K+ +      
Sbjct: 171 KPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIV 230

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
             K+MV       V +++++I +LCK   + EA+ L+Y M   GI P VV +N +I   C
Sbjct: 231 WMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMC 290

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G  + A  LF++M      ++ P+ VT + +++  CK G V  A  +   MI+  ++ 
Sbjct: 291 NSGQWKQASILFKEMLEW---NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ TY++LI G  +    +E+  L +EM+ R + P+ V ++  +     +G V  A  ++
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           + MI++ + P+  TY+ L  G C +  + +A K+ + ++ +    D  SYNILI   CKS
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  AKQL   M  +GL P+ IT+ TLI G C+ G    A ++++ M      P+L+ Y
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
           +++++G CK   LD A +L +A ++  L  + +    L+ G    GK+ +A  +FS +
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 39/280 (13%)

Query: 405 CRNGCVK---QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           C+ G       A    NQ++  +       +N L+  L +  +  +   +   M   G+ 
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
             + T   LI+  C    +     V   + K+  KP+++ +N++INGLC +  +  A   
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 522 LQASQ-------------------RIGLLDA-----------------ITYNTLINGYFI 545
           L                       +IG   A                 ++Y+ +I+    
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           N  + EA  +F  MR++GI+   V YN LI  +C  G ++QA  L K M+   + PD VT
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           ++ LV    K     E + +   M+   + PD  TY+++I
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLI 356



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 4/188 (2%)

Query: 475 CKGG---NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           CKGG   N + A+  +  M  +   P +  +N ++  L +    D+  S+ +  +  G+ 
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 532 DAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            ++ T   LIN       +   F++  ++  +G   + + +N LIN LC  G   +A E 
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  ++  G  P   T+T +V    K       I     MV     P+  +Y+ II  L  
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 651 EKSAEDQV 658
            +   + V
Sbjct: 257 NRLVNEAV 264


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 249/507 (49%), Gaps = 8/507 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G T  A  V++  +  G  V + A+N  ++   +    GR     + + S  
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRY---GRLDAARRLIASMP 136

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  LC   ++ +AL+L   ML+ G  P+VV + +++   C+      A+
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            +  +M         PN VT+N IING C+ GRV+ A+EI   +   G   ++ +Y T++
Sbjct: 197 NVLDEM---RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G       ++   L  EMV +  +PN V ++  + +    G VE A+ VL  M      
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+    +I+   +C+ G V  A+   N +       D  SY  ++  LC++     AK+L
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 373

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M+ +   P+ +T+ T I   C+ G IE A+++ E M +      +V YN++++G C 
Sbjct: 374 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 433

Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
              +D+A  L   +      + ITY TL+ G     ++  A  + + M      +N V +
Sbjct: 434 QGRVDSALELF--NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTF 491

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N+L++F C+ G  ++A EL+  M+ HG  P+ +T+ TL+   +K+C+ EE +EL   +V 
Sbjct: 492 NVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS 551

Query: 632 SGVSPDNQTYNAIISPLLGEKSAEDQV 658
            GVS D  TY++++  L  E   E+ +
Sbjct: 552 KGVSLDTITYSSVVDVLSREDRTEEAI 578



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 250/513 (48%), Gaps = 26/513 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           I+  L +  R  DAL L+ +++                    C+ +   +  L+ A  + 
Sbjct: 147 IIRGLCDRGRVGDALALLDDMLQRG-----------------CQPSVVTYTVLLEAVCKS 189

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                A +V+ +++ KG + +I  +N  ++ + +   +    ++   + S G+  ++ ++
Sbjct: 190 SGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSY 249

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             V+  LC   + ++   L+  M+     PN V F+M++   C+ G +E A+++ ++   
Sbjct: 250 TTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQ--- 306

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           MS     PN+   N +IN  CK GRV+ A +    M   G + +  +Y T++ G  R G 
Sbjct: 307 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            E A  L  EMV++   PN V +N+ I  L  +G +E A+ ++  M +        TY+ 
Sbjct: 367 WEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNA 426

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C  G V  A +L N +  E    +  +Y  L+  LC +  L AA +LL+ MI + 
Sbjct: 427 LVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGLCHAERLDAAAELLAGMIQKD 483

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
              + +T+  L+  +C+ G +E A+++   M +    PNL+ +N++++G+ KD + + A 
Sbjct: 484 CPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEAL 543

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG-YNILINF 577
            LL      G+ LD ITY+++++      +  EA  M   ++++G+   KVG YN ++  
Sbjct: 544 ELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR-PKVGMYNKILFA 602

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           LCK     QA +    M+ +G +P+  TY  L+
Sbjct: 603 LCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 635



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 184/420 (43%), Gaps = 26/420 (6%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE---------FLEGLLDSYE 140
           F   + S   ++  L   RR+DD  +L   ++    V P E         F  G +    
Sbjct: 242 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV-PNEVTFDMLVRFFCRGGMVERA 300

Query: 141 I----------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           I          C     + + ++ A  + G  + AYD +  + + G +    ++   L  
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 360

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +        +L  EMV      N  TFN  I  LC++  +E+A+ L   M + G    
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 420

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           +V +N +++  C  G ++ AL+LF  +         PN++T+  ++ G C   R++ A E
Sbjct: 421 IVTYNALVHGFCVQGRVDSALELFNNL------PCEPNTITYTTLLTGLCHAERLDAAAE 474

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   MI+     N  T+  L+  + + G  EEA+ L ++M++ G  PN + +N+ +  + 
Sbjct: 475 LLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGIT 534

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            + + E AL +L  ++ K +  D  TYS +   L R    ++A ++ + V +  M     
Sbjct: 535 KDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVG 594

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            YN ++  LCK      A    + M+  G +P+  TY  LI+G    G ++ A  V   +
Sbjct: 595 MYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 654



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 33/316 (10%)

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           +  L A  D+  A  ++     +   PD +  + L + LCR G    A ++         
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSM-----------IVRGLI------------- 461
             D ++YN L+   C+   L AA++L++SM           I+RGL              
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLD 165

Query: 462 --------PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
                   P ++TY  L++  CK      A+ V + M+     PN+V YN IING+C++ 
Sbjct: 166 DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 225

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D AK +L      G   D ++Y T++ G     +  +   +F+EM +     N+V ++
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           +L+ F C+ G  ++A ++++ M  HG  P+      ++    K    ++  +  ++M + 
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 633 GVSPDNQTYNAIISPL 648
           G +PD  +Y  ++  L
Sbjct: 346 GCNPDTISYTTVLRGL 361



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 2/221 (0%)

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +  L   ++LA A +L+ +   RG  PD+     LI   C+ G    A +V    +    
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
             ++  YN+++ G C+   LDAA+ L+ AS  +   DA TY  +I G    G++ +A A+
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLI-ASMPVP-PDAYTYTPIIRGLCDRGRVGDALAL 163

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             +M   G   + V Y +L+  +CK   + +A  ++  M   G  P+ VTY  ++    +
Sbjct: 164 LDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 223

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               ++  E+ + +   G  PD  +Y  ++  L   +  +D
Sbjct: 224 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDD 264



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 114/267 (42%), Gaps = 25/267 (9%)

Query: 99  AIVHLLVNWRRFDDALLLMGNL-MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
           A+VH      R D AL L  NL    N+++    L GL  +  +                
Sbjct: 426 ALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERL---------------- 469

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
                + A +++  +  K   ++   +N  +S   +   +    +L  +M+  G   N+ 
Sbjct: 470 -----DAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 524

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           TFN ++  + K+C  EEAL L + ++  G+  + + ++ +++   +    E A+++   +
Sbjct: 525 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 584

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    + P    +N I+   CK    + A +    M+  G   N  TY  LI+G A  
Sbjct: 585 QDMG---MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 641

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNS 364
           G  +EA  +  E+  +G++  +++ + 
Sbjct: 642 GLLKEARYVLSELYAKGVLSKSLLEDQ 668


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 254/485 (52%), Gaps = 8/485 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++++++       + ++N  +    +  E+ +  +L  EM   G   ++ T+ ++I 
Sbjct: 161 AVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILID 220

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A CK  K++EA+ L   M   G+  +++ +  +I   C  G+L+    LF ++ +  GDS
Sbjct: 221 AFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV-LERGDS 279

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P ++T+N +I GFCKLGR++ A EI   M++ G+  NV TY  LIDG    G ++EAL
Sbjct: 280 --PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L + M+++   PN V YN  I+ L  +  V  AL ++  M  +   PD+ TY+ L  GL
Sbjct: 338 QLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGL 397

Query: 405 CRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           C  G + +A KL   +L++  +   D  S+N LI+ LCK N L  A  +   ++ +    
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAG 457

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           DI+T   L++   K G++  A+++++ +   +  PN   Y ++I+G CK   L+ AK LL
Sbjct: 458 DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLL 517

Query: 523 QASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
               R+  L      YN L++     G + +A+ +F EM+      + + +NI+I+   K
Sbjct: 518 -CKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLK 576

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G  + A  L+  M   G+ PD  TY+ L+ RF K    +E I   D M+ SG  PD   
Sbjct: 577 AGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHI 636

Query: 641 YNAII 645
            ++++
Sbjct: 637 CDSVL 641



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 249/498 (50%), Gaps = 12/498 (2%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V Q+    G S+S  A NN ++ LV+       +  Y++M+      N  + + ++ 
Sbjct: 57  AVSVFQQAVDSGGSLSF-AGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLE 115

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF--ALKLFRKMGVMSG 282
              +  K   A  +   MLK G   NV  +N+++   C+  +LEF  A+ L R+M     
Sbjct: 116 CFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCR--NLEFGKAVSLLREM---RQ 170

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           +S++P+ V++N +I GFC+   +E A ++   M  +G   ++ T+  LID + + G  +E
Sbjct: 171 NSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDE 230

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+ L  EM  +GL  + +VY S I      G+++    +  +++++   P   TY+ L +
Sbjct: 231 AMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ G +K+A ++   ++E  +  + Y+Y  LI+ LC       A QLL+ M+ +   P
Sbjct: 291 GFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEP 350

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +++TY  +I+  CK   +  A+++ E MKK   +P+ + YNS++ GLC    LD A  LL
Sbjct: 351 NVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLL 410

Query: 523 QASQRIGLL---DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
               +       D I++N LI+G     ++ +A  ++  +     A + V  NIL+N   
Sbjct: 411 YLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTL 470

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A EL K +    I+P+  TYTT++  F K         L   M LS + P   
Sbjct: 471 KSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVF 530

Query: 640 TYNAIISPLLGEKSAEDQ 657
            YN ++S L  +K   DQ
Sbjct: 531 DYNCLLSSLC-KKGTLDQ 547



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 225/464 (48%), Gaps = 6/464 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   +  L+ A  + G  + A  +++++K KG    +  + + +       E+ R  
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ E++  G      T+N +I   CK  +L+EA  ++  M++ G+ PNV  +  +I+  
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C VG  + AL+L   + +M      PN VT+N IIN  CK   V  A EI   M K    
Sbjct: 328 CGVGKTKEALQL---LNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTR 384

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGAL 379
            +  TY +L+ G    G  +EA +L   M+K      P+ + +N+ IH L     +  AL
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQAL 444

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   +++K    D  T +IL     ++G V +A +L  Q+    +V ++ +Y  +I+  
Sbjct: 445 DIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGF 504

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+  L  AK LL  M +  L P +  Y  L+   CK G ++ A +++E M++ +  P++
Sbjct: 505 CKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDV 564

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           + +N +I+G  K   + +A+SLL      GL  D  TY+ LIN +   G + EA + F +
Sbjct: 565 ISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           M + G   +    + ++ +    G   +  E +K ++   ++ D
Sbjct: 625 MIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLD 668



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 233/525 (44%), Gaps = 52/525 (9%)

Query: 19  AFHVGKQFA-NPSTEDIVFRAICVNLR-QRKWKILEQMAPSLTNSLVNRVVS-------- 68
           A  + + FA N    +I+ + +C NL   +   +L +M     NSL+  VVS        
Sbjct: 131 ALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQ---NSLMPDVVSYNTVIRGF 187

Query: 69  ----EFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
               E  K+ +LA E                S C+    LV W    DA    G +  A 
Sbjct: 188 CEGKELEKALQLANEMQG-------------SGCSWS--LVTWGILIDAFCKAGKMDEAM 232

Query: 125 SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
            +      +GL       +A   V+ +L+R     G  +    +  ++  +G S     +
Sbjct: 233 GLLKEMKHKGL-------EADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +    KL  +    ++++ M+  G   NV T+  +I  LC   K +EAL L   ML+
Sbjct: 286 NTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQ 345

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
               PNVV +N+IIN+ C+   +  AL++     +M      P+++T+N ++ G C  G 
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVADALEIVE---LMKKRRTRPDNITYNSLLGGLCAKGD 402

Query: 305 VEFAEEIRYAMIKAG--IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR----GLMPN 358
           ++ A ++ Y M+K     D +V ++  LI G  +G    +AL + D +V++     ++  
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT 462

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           N++ NST+      GDV  A+ +   + +  I P+  TY+ +  G C+ G +  A  L  
Sbjct: 463 NILLNSTLK----SGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLC 518

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++    +    + YN L++ LCK   L  A +L   M      PD+I++  +IDG  K G
Sbjct: 519 KMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAG 578

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           +I+ A  +   M      P+L  Y+ +IN   K   LD A S   
Sbjct: 579 DIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 161/325 (49%), Gaps = 6/325 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL-YKEMVSCGYVE-NVNTFNLV 222
           A ++++ +K +        +N+ L  L    ++    KL Y  +    Y + +V +FN +
Sbjct: 371 ALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNAL 430

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I+ LCK  +L +AL +Y  +++     ++V  N+++N   + GD+  A++L++++   S 
Sbjct: 431 IHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQI---SN 487

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             ++PNS T+  +I+GFCK G +  A+ +   M  + +  +V  Y  L+    + G+ ++
Sbjct: 488 SKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQ 547

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A RL +EM +    P+ + +N  I      GD++ A  +L  M    + PD FTYS L  
Sbjct: 548 AWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLIN 607

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
              + G + +A    +++++     DA+  + ++ Y           + +  ++ + ++ 
Sbjct: 608 RFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVL 667

Query: 463 DIITYGTLIDGYC-KGGNIEGAVQV 486
           D     T++D  C   GN++ A ++
Sbjct: 668 DKELTCTVMDYMCSSSGNMDIAKRL 692



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 123/246 (50%), Gaps = 3/246 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+AL+    +      A D+   L  K  +  I   N  L+  +K  ++ +  +L+K++ 
Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           +   V N +T+  +I   CK   L  A  L  +M  S + P+V  +N +++  C+ G L+
Sbjct: 487 NSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLD 546

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +LF +M     D   P+ ++ N +I+G  K G ++ AE +   M  AG+  ++ TY+
Sbjct: 547 QAWRLFEEM---QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYS 603

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LI+ + + G  +EA+   D+M+  G  P+  + +S + +  ++G+ +     +  ++DK
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDK 663

Query: 389 HICPDH 394
            +  D 
Sbjct: 664 DVVLDK 669


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/377 (33%), Positives = 204/377 (54%), Gaps = 3/377 (0%)

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           + R+MG     +  PN+ ++N +I G  + GR   A E+   M +  +  N  TY T+ID
Sbjct: 1   MLRRMG--RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMID 58

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ +GG  E   RL D+MV  GL PN + YN  +  L   G +     +L +M  + + P
Sbjct: 59  GHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 118

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D FTYSIL  GL RNG  K    L  + L+  +    Y+ +IL+N LCK   ++ A+++L
Sbjct: 119 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 178

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
            S++  GL+P  + Y TLI+GYC+ G +EGA   +  MK    KP+ + YN++INGLCK 
Sbjct: 179 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 238

Query: 513 ASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  A+ LL   Q  G+   + T+NTLI+ Y   G++ + F + SEM+  G+  N V Y
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             ++N  CK G   +A  ++  M    ++P+   Y  ++  + ++   ++   L + M  
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358

Query: 632 SGVSPDNQTYNAIISPL 648
           +G+SP   TYN +I  L
Sbjct: 359 NGISPSIVTYNLLIKGL 375



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 229/437 (52%), Gaps = 4/437 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  ++N+VI  + +  +  +A+ ++  M +  + PN + +N +I+   + GDLE   +L 
Sbjct: 14  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M V  G  + PN++T+N +++G C+ GR+     +   M    +  +  TY+ L DG 
Sbjct: 74  DQM-VCHG--LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 130

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           +R G S+  L L  + +K G+   +   +  ++ L  +G V  A  VL  +++  + P  
Sbjct: 131 SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 190

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
             Y+ L  G C+ G ++ AF    Q+   H+  D  +YN LIN LCK+  +  A+ LL  
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ P + T+ TLID Y + G +E    V   M++   KPN+V Y SI+N  CK+  
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310

Query: 515 LDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  A ++L     +  L +A  YN +I+ Y  +G   +AF +  +M++ GI+ + V YN+
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 370

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI  LC      +A E++  +  H +IPD V+Y TL++      + ++ ++L   M   G
Sbjct: 371 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430

Query: 634 VSPDNQTYNAIISPLLG 650
           +    +TY+ +IS L G
Sbjct: 431 IKSTVRTYHQLISGLGG 447



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 220/452 (48%), Gaps = 10/452 (2%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  +   +K  ++   ++L  +MV  G   N  T+N+++  LC+  ++ E  +L   M
Sbjct: 52  TYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM 111

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGF 299
               + P+   ++++ +   + GD +  L LF K    GV  GD       T + ++NG 
Sbjct: 112 ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGD------YTCSILLNGL 165

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G+V  AEE+  +++ AG+      Y TLI+GY + G  E A     +M  R + P++
Sbjct: 166 CKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH 225

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + YN+ I+ L     +  A  +L +M D  + P   T++ L     R G +++ F + ++
Sbjct: 226 ITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 285

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E  +  +  SY  ++N  CK+  +  A  +L  M  + ++P+   Y  +ID Y + G 
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 345

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
            + A  + E MK     P++V YN +I GLC  + +  A+ ++ +     L+ DA++YNT
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNT 405

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI+     G I +A  +   M   GI      Y+ LI+ L   G   +   L + M+ + 
Sbjct: 406 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 465

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           ++P    +  +V  +SK  +  +  +L  +M+
Sbjct: 466 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 497



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 5/329 (1%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E L+ L+++  +   T  +++ L+    Q G  EGA+    ++K +        +N  ++
Sbjct: 176 EVLQSLVNAGLV--PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 233

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K   I     L  EM   G    V TFN +I A  +  +LE+   +   M ++G+ P
Sbjct: 234 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 293

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           NVV +  I+N  C+ G +  A+ +      M    VLPN+  +N II+ + + G  + A 
Sbjct: 294 NVVSYGSIVNAFCKNGKIPEAVAILDD---MFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 350

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +   M   GI  ++ TY  LI G        EA  + + +    L+P+ V YN+ I   
Sbjct: 351 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 410

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G+++ AL +   M    I     TY  L  GL   G + +   L+ ++++ ++V   
Sbjct: 411 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN 470

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVR 458
             +NI++    K  N   A+ L   M+ +
Sbjct: 471 AIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 252/501 (50%), Gaps = 23/501 (4%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  + +K++++   ++I+++N  +      +++      + ++   G+  +V TFN +++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 225 ALCKECKLEEALSLYYRMLKSG---------------IWPNVVCFNMIINEACQVGDLEF 269
            LC E ++ EAL+L+  M+++G               + P V+ FN +IN  C  G +  
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A  L  KM    G  +  + VT+  I+NG CK+G  + A  +   M +  I  +V  Y+ 
Sbjct: 245 AAALVNKM---VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +ID   + G   +A  L  EM+++G+ PN   YN  I    + G    A  +L DMI++ 
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I PD  T++ L     + G + +A KL +++L   +  D  +YN +I   CK N    AK
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            +   M      PD++T+ T+ID YC+   ++  +Q+   + +     N   YN++I+G 
Sbjct: 422 HMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C+  +L+AA+ L Q     G+  D IT N L+ G+  N K+ EA  +F  ++   I ++ 
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V YNI+I+ +CK     +A +L   + +HG+ PD  TY  +++ F    +  +   L   
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597

Query: 629 MVLSGVSPDNQTYNAIISPLL 649
           M  +G  PDN TYN +I   L
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCL 618



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 246/485 (50%), Gaps = 17/485 (3%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +   V++N       LY++M       N+ +FN++I   C   KL  +LS + ++ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVL---------PNSVTH 292
            G  P+VV FN +++  C    +  AL LF  M   G +   ++          P  +T 
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +ING C  GRV  A  +   M+  G+  +V TY T+++G  + G ++ AL L  +M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
             + P+ V+Y++ I  L  +G    A ++ S+M++K I P+ FTY+ +  G C  G    
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   ++E  +  D  ++N LI+   K   L  A++L   M+ R + PD +TY ++I 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G+CK    + A  +++ M      P++V +N+II+  C+   +D    LL+   R GL+ 
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           +  TYNTLI+G+     +  A  +F EM + G+  + +  NIL+   C+    ++A EL 
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +V+ +  I  D V Y  ++    K    +E  +L   + + GV PD QTYN +IS   G+
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585

Query: 652 KSAED 656
            +  D
Sbjct: 586 SAISD 590



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 220/443 (49%), Gaps = 8/443 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +MV  G    V TFN +I  LC E ++ EA +L  +M+  G+  +VV +  I+N  C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++GD + AL L  KM       + P+ V ++ II+  CK G    A+ +   M++ GI  
Sbjct: 273 KMGDTKSALNLLSKM---EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY  +IDG+   G   +A RL  +M++R + P+ + +N+ I     EG +  A  + 
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ + I PD  TY+ +  G C++      F     + +     D  ++N +I+  C++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKH----NRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +    QLL  +  RGL+ +  TY TLI G+C+  N+  A  +++ M      P+ +  
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N ++ G C++  L+ A  L +  Q   + LD + YN +I+G     K+ EA+ +F  +  
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  +   YN++I+  C       A  L   M  +G  PD  TY TL+    K    ++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 622 VIELHDDMVLSGVSPDNQTYNAI 644
            IEL  +M  +G S D  T   +
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMV 648



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 201/408 (49%), Gaps = 9/408 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  +V    ++G T+ A +++ K++       +  ++  +  L K         L+ EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   NV T+N +I   C   +  +A  L   M++  I P+V+ FN +I+ + + G L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KL  +M       + P++VT+N +I GFCK  R + A+ +   M       +V T+
Sbjct: 383 FEAEKLCDEM---LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 435

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID Y R    +E ++L  E+ +RGL+ N   YN+ IH      ++  A  +  +MI 
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +CPD  T +IL  G C N  +++A +L   +    +  D  +YNI+I+ +CK + +  
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  S+ + G+ PD+ TY  +I G+C    I  A  ++  MK    +P+   YN++I 
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFA 554
           G  K   +D +  L+   +  G   DA T   ++     +G++ ++F+
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFS 662



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 16/234 (6%)

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           A   N +I    + N    A  L   M +R +  +I ++  LI  +C    +  ++  + 
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA--------------- 533
            + K+  +P++V +N++++GLC +  +  A +L       G L+A               
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 534 -ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            IT+NTLING  + G++ EA A+ ++M   G+ ++ V Y  ++N +CK G  + A  L+ 
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M    I PD V Y+ ++ R  K+    +   L  +M+  G++P+  TYN +I 
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 261/522 (50%), Gaps = 12/522 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           +  P V D   R  + I  T+  YD++    +++++KG + +++  +  ++   +  ++ 
Sbjct: 83  RPLPTVID-FSRLFSAIAKTK-QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 140

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             +    +++  GY  N  TF+ +I  LC E ++ EAL L  RM++ G  P+++  N ++
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N  C  G    A+ L  KM V  G    PN+VT+  ++N  CK G+   A E+   M + 
Sbjct: 201 NGLCLSGKEAEAMLLIDKM-VEYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            I  +   Y+ +IDG  + GS + A  L +EM  +G+  N + YN  I      G  +  
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L DMI + I P+  T+S+L     + G +++A +LH +++   +  D  +Y  LI+ 
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            CK N+L  A Q++  M+ +G  P+I T+  LI+GYCK   I+  ++++  M       +
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
            V YN++I G C+   L+ AK L Q   S+++   + +TY  L++G   NG+  +A  +F
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP-NIVTYKILLDGLCDNGESEKALEIF 496

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            ++    + ++   YNI+I+ +C       A +L   + L G+ P   TY  ++    K 
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
               E   L   M   G +PD  TYN +I   LG+  A   V
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 228/455 (50%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+++M+    +  V  F+ +  A+ K  + +  L+L  +M   GI  N+   +++IN  C
Sbjct: 75  LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  A   F  MG +      PN++T + +ING C  GRV  A E+   M++ G   
Sbjct: 135 RCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ T  TL++G    G   EA+ L D+MV+ G  PN V Y   ++ +   G    A+ +L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +++I  D   YSI+  GLC++G +  AF L N++  + +  +  +YNILI   C +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                  +LL  MI R + P+++T+  LID + K G +  A ++++ M      P+ + Y
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
            S+I+G CK+  LD A  ++      G    I T+N LINGY    +I +   +F +M  
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  + V YN LI   C+ G    A+EL + M+   + P+ VTY  L+     N   E+
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E+ + +  S +  D   YN II  +      +D
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 243/485 (50%), Gaps = 4/485 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+  + K+   G+  +   ++  ++ L     +    +L   MV  G+  ++ T N ++ 
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   K  EA+ L  +M++ G  PN V +  ++N  C+ G    A++L RKM      +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERN 258

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +  ++V ++ II+G CK G ++ A  +   M   GI  N+ TY  LI G+   G  ++  
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L  +M+KR + PN V ++  I     EG +  A  +  +MI + I PD  TY+ L  G 
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   + +A ++ + ++ +    +  ++NILIN  CK+N +    +L   M +RG++ D 
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TLI G+C+ G +  A ++++ M   +  PN+V Y  +++GLC +   + A  + + 
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            ++  + LD   YN +I+G     K+ +A+ +F  +   G+      YNI+I  LCK G 
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A  L + M   G  PD  TY  L+     +    + ++L +++   G S D  T   
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618

Query: 644 IISPL 648
           +I  L
Sbjct: 619 VIDML 623



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 212/413 (51%), Gaps = 5/413 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  ++    + G T  A ++++K++ +   +    ++  +  L K   +   +
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM   G   N+ T+N++I   C   + ++   L   M+K  I PNVV F+++I+  
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A +L ++M +  G  + P+++T+  +I+GFCK   ++ A ++   M+  G D
Sbjct: 344 VKEGKLREAEELHKEM-IHRG--IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+RT+  LI+GY +    ++ L L  +M  RG++ + V YN+ I      G +  A  +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ + + P+  TY IL  GLC NG  ++A ++  ++ +  M  D   YNI+I+ +C 
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           ++ +  A  L  S+ ++G+ P + TY  +I G CK G +  A  ++  M++    P+   
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
           YN +I     D     +  L++  +R G  +DA T   +I+    +G++ ++F
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 1/313 (0%)

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
           +++A+ L  +M+    +P  + ++     +      +  L +   M  K I  + +T SI
Sbjct: 69  ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +    CR   +  AF    ++++     +  +++ LIN LC    ++ A +L+  M+  G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             PD+IT  TL++G C  G    A+ + + M +   +PN V Y  ++N +CK      A 
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL+  +   + LDA+ Y+ +I+G   +G +  AF +F+EM   GI  N + YNILI   
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C  G +    +L++ MI   I P+ VT++ L+  F K     E  ELH +M+  G++PD 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368

Query: 639 QTYNAIISPLLGE 651
            TY ++I     E
Sbjct: 369 ITYTSLIDGFCKE 381


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/471 (31%), Positives = 244/471 (51%), Gaps = 4/471 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  + ++L+  G +  I  +N  ++    + E+   + +  +++  GY  +  TFN +I 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIK 146

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   K++EAL  +  +L  G   +   +  +IN  C++G+   AL++ RK+    G  
Sbjct: 147 GLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI---DGKL 203

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V  N V +N II+  CK   V  A E+   MI   I  +V T++ LI G+   G  EEA 
Sbjct: 204 VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAF 263

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  EMV + + P+   +N  +  L  EG+++GA  +L  M+ + + P+  TYS L  G 
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C    V +A  + N + +     +A+SY  +IN  CK   +  A  L + M  +G+ PD 
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDK 383

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY +LIDG CK G I  A ++ + M    +  N+  YN +I+ LCK+  +D A +L++ 
Sbjct: 384 VTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKK 443

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +  G+  D  T+N LI G    G++  A  +F ++ + G +VN   YNI++N LCK G 
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGL 503

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           + +A  L+  M  +GIIPD VTY TL+         E+  +L  +M+   V
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 225/418 (53%), Gaps = 4/418 (0%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A+SL  R+   GI P++  FN++IN  C + ++ FA  +  K+  M  +   P+++T N 
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYE---PDTITFNT 143

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I G C  G+V+ A      ++  G   +  +Y TLI+G  + G +  AL++  ++  + 
Sbjct: 144 LIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKL 203

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           +  N V+YN+ I  L     V  A  + S MI K I PD  T+S L  G C  G +++AF
Sbjct: 204 VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAF 263

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L  +++ +++  D Y++NIL++ LCK  NL  AK +L  M+  G++P+++TY +L+DGY
Sbjct: 264 GLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           C    +  A  V   + ++   PN   Y ++ING CK   +D A SL    Q  G+  D 
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDK 383

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYN+LI+G   +G+I+ A+ +  EM + G   N   YN LI+ LCK     QA  L+K 
Sbjct: 384 VTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKK 443

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +   GI PD  T+  L+    K    +   ++  D++  G S +  TYN +++ L  E
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKE 501



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 216/413 (52%), Gaps = 4/413 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++     G  + A      +   G  +   ++   ++ L K+ E     ++ +++
Sbjct: 140 TFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKI 199

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  NV  +N +I +LCK   + +A  LY +M+   I P+VV F+ +I   C VG L
Sbjct: 200 DGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQL 259

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A  LFR+M +    ++ P+  T N +++  CK G ++ A+ +   M+K G+  NV TY
Sbjct: 260 EEAFGLFREMVL---KNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTY 316

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           ++L+DGY       +A  + + + + G  PN   Y + I+       V+ AL + +DM  
Sbjct: 317 SSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQF 376

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD  TY+ L  GLC++G +  A++L +++ +     + ++YN LI+ LCK++++  
Sbjct: 377 KGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQ 436

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L+  +  +G+ PD+ T+  LI G CK G ++ A  V++++       N   YN ++N
Sbjct: 437 AIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVN 496

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
           GLCK+   D A++LL      G++ DA+TY TLI   F   +  +A  +  EM
Sbjct: 497 GLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREM 549



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 167/354 (47%), Gaps = 32/354 (9%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           ++ K    +++ ++ +  +      AY++  ++  K  S  +  ++  +     + ++  
Sbjct: 202 KLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEE 261

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + L++EMV      +  TFN+++ ALCKE  L+ A ++   M+K G+ PNVV ++ +++
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMD 321

Query: 260 EAC---QVGDLEFALKLFRKMGV-----------------------------MSGDSVLP 287
             C   QV   +  L    +MG                              M    + P
Sbjct: 322 GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           + VT+N +I+G CK GR+ +A E+   M   G   N+ TY  LID   +    ++A+ L 
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALV 441

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            ++  +G+ P+   +N  I+ L   G ++ A  V  D++ K    + +TY+I+  GLC+ 
Sbjct: 442 KKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKE 501

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           G   +A  L +++ +  ++ DA +Y  LI  L   +    A++LL  MI R ++
Sbjct: 502 GLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 274/540 (50%), Gaps = 21/540 (3%)

Query: 34  IVFRAICVNLRQRKWKILEQMAPSL---------TNSLVNRVV---SEFRKSPKLALEFY 81
           ++ ++IC ++ +  WK L  + P           T + V +V+   S + +SP L+   +
Sbjct: 13  LLIQSICASVIKGSWKNL--LRPKFGSNDYHLITTTATVRQVLLHLSLYDQSPCLSWALF 70

Query: 82  TWVGEN-NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYE 140
            W+  +   + HSL+SS  ++++L   + F  A   + N+   + +S    L  L+  ++
Sbjct: 71  KWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAFLENIAFKDFLSTQSVLSSLVKIHD 130

Query: 141 ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
                  V   LV        T  A  V + ++V G    +HA    L+ L K       
Sbjct: 131 DPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTV 190

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           WK+YK+MV  G V N++ +N++++A CK   +E+A  +   M    ++P++  +N +I+ 
Sbjct: 191 WKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISL 250

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G    AL +  +M  M+G S  P+  T+N +I GFC+ GR+  A ++ +  IK  +
Sbjct: 251 YCKKGMHYEALSVQDRME-MAGIS--PDIFTYNSLIYGFCREGRMREAVQL-FRDIK-DV 305

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY +LIDGY R    +EALRL + M ++GL P  + YNS +  L   G +  A  
Sbjct: 306 TPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANI 365

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L++M ++ I PD+ T + L    C+ G ++ A K+ ++++   +  D ++Y  LI+  C
Sbjct: 366 LLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFC 425

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  AK+LL  M+  G  P   TY  L+D YCK  N E  +++ + + +     ++ 
Sbjct: 426 KAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVS 485

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
           +Y ++I   CK   +D A+ +L   +  G+  D++ Y +L  GY+  GK+     +  EM
Sbjct: 486 VYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEM 545



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 173/328 (52%), Gaps = 3/328 (0%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   ++     L++  A+   ++   ++  +MVK G++ N  VYN  +H     GDVE A
Sbjct: 166 GFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKA 225

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             VLS+M  K + PD FTY+ L    C+ G   +A  + +++    +  D ++YN LI  
Sbjct: 226 EKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYG 285

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C+   +  A QL     ++ + P+ +TY +LIDGYC+  +++ A+++ E M +    P 
Sbjct: 286 FCREGRMREAVQLFRD--IKDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPT 343

Query: 499 LVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           ++ YNSI+  LC+   L  A  LL + S+R    D +T NTLIN Y   G +  A  +  
Sbjct: 344 VITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKD 403

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           +M   G+ +++  Y  LI+  CK     +A+EL+  M+  G  P Y TY+ LV  + K  
Sbjct: 404 KMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQ 463

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAII 645
           + E VI+L D++V  G+  D   Y A+I
Sbjct: 464 NEEAVIKLPDELVRRGLCVDVSVYRALI 491



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 189/389 (48%), Gaps = 16/389 (4%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
            EA+ ++  M  +G  P++    +++N   +    +   K+++KM  +    V+ N   +
Sbjct: 153 HEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLG---VVANIHVY 209

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++  CK G VE AE++   M    +  ++ TY TLI  Y + G   EAL + D M  
Sbjct: 210 NVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEM 269

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   YNS I+    EG +  A+ +  D+ D  + P+H TY+ L  G CR   + +
Sbjct: 270 AGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDE 327

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   + E+ +     +YN ++  LC+   L  A  LL+ M  R + PD +T  TLI+
Sbjct: 328 ALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLIN 387

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
            YCK G++  A++V + M     K +   Y ++I+G CK   +D AK LL      G++D
Sbjct: 388 AYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELL-----FGMMD 442

Query: 533 A------ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           A       TY+ L++ Y           +  E+   G+ V+   Y  LI   CK      
Sbjct: 443 AGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDC 502

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           A+ ++ +M   GI  D V YT+L   + K
Sbjct: 503 AQRVLGLMKDKGIFGDSVVYTSLAYGYWK 531



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 163/336 (48%), Gaps = 3/336 (0%)

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           D N    + L+  Y     + EA+++ + M   G  P+       ++ L  +   +    
Sbjct: 133 DVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWK 192

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +   M+   +  +   Y++L    C++G V++A K+ +++  + +  D ++YN LI+  C
Sbjct: 193 IYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYC 252

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K      A  +   M + G+ PDI TY +LI G+C+ G +  AVQ++ ++K V   PN V
Sbjct: 253 KKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVT--PNHV 310

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEM 559
            Y S+I+G C+   LD A  L +     GL    ITYN+++      G++ +A  + +EM
Sbjct: 311 TYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEM 370

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               I  + V  N LIN  CK G  + A ++   M+  G+  D  TY  L+  F K    
Sbjct: 371 SERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEI 430

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           ++  EL   M+ +G SP   TY+ ++     +++ E
Sbjct: 431 DKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEE 466



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 179/380 (47%), Gaps = 14/380 (3%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+++F  M V   +   P+      ++N   K    +   +I   M+K G+  N+  Y  
Sbjct: 155 AIQVFEHMRV---NGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNV 211

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+    + G  E+A ++  EM  + + P+   YN+ I     +G    AL V   M    
Sbjct: 212 LLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG 271

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I PD FTY+ L  G CR G +++A +L   +  + +  +  +Y  LI+  C+ N+L  A 
Sbjct: 272 ISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEAL 329

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L   M  +GL P +ITY +++   C+GG +  A  +   M + + +P+ V  N++IN  
Sbjct: 330 RLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAY 389

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   + +A  +       GL LD  TY  LI+G+    +I +A  +   M + G + + 
Sbjct: 390 CKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSY 449

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK----NCSPEEVIE 624
             Y+ L++  CK    +   +L   ++  G+  D   Y  L+ RF K    +C+ + V+ 
Sbjct: 450 CTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCA-QRVLG 508

Query: 625 LHDDMVLSGVSPDNQTYNAI 644
           L  D    G+  D+  Y ++
Sbjct: 509 LMKD---KGIFGDSVVYTSL 525


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 238/467 (50%), Gaps = 5/467 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           ++   +S L+K   +   +    +MV  G   ++     ++  L K  K +EA  ++  +
Sbjct: 308 SYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTI 367

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           LK  + PN V +  +++  C+VGD+EFA  + +KM     + VLPN VT + IING+ K 
Sbjct: 368 LKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKM---EKEHVLPNVVTFSSIINGYAKK 424

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +  A E+   M++  I  NV  YA L+DGY R G  E A     EM   GL  NN+++
Sbjct: 425 GMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIF 484

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           +  ++ L   G ++ A  ++ D++ K I  D F YS L  G  + G    A  +  ++ E
Sbjct: 485 DILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTE 544

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + M  D  +YN L   L +       K + S MI  GL PD +TY ++++ Y   G  E 
Sbjct: 545 KDMQFDVVAYNALTKGLLRLGKYEP-KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTEN 603

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLIN 541
           A+ +   MK     PN+V YN +I GLCK  +++   S+L     +G +   I +  L+ 
Sbjct: 604 ALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLK 663

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            Y  + K      +  ++ ++G+ +N++ YN LI  LC+ G  ++A  ++  M++ GI  
Sbjct: 664 AYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISA 723

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D VTY  L+  +      E+    +  M++SG+SP+  TYNA++  L
Sbjct: 724 DIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGL 770



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/470 (28%), Positives = 250/470 (53%), Gaps = 5/470 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++  W   ++   K   I  F+ LY++M+  G + +V T + ++Y LC+  KL EA  L 
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M   G+ PN V +  II+   + G +  A     +M V+ G S+  + V    +++G 
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQM-VVRGISI--DLVLCTTMMDGL 351

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            K G+ + AEE+   ++K  +  N  TY  L+DG+ + G  E A  +  +M K  ++PN 
Sbjct: 352 FKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNV 411

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V ++S I+    +G +  A+ VL  M+  +I P+ F Y+IL  G  R G  + A   + +
Sbjct: 412 VTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKE 471

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +    +  +   ++IL+N L +S  +  A+ L+  ++ +G+  D+  Y +L+DGY K GN
Sbjct: 472 MKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGN 531

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
              A+ V + M + + + ++V YN++  GL +    +  KS+      +GL  D +TYN+
Sbjct: 532 ESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNS 590

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           ++N YFI GK   A  + +EM++ G+  N V YNILI  LCK G  ++   ++  M+  G
Sbjct: 591 VMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVG 650

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +P  + +  L+  +S++   + ++++H  +V  G++ +   YN +I+ L
Sbjct: 651 YVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVL 700



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 243/499 (48%), Gaps = 8/499 (1%)

Query: 126 VSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           V  +EF E +L   E     P V  F +++    + G    A +V++K+       ++  
Sbjct: 389 VGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFV 448

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +   L    +  +       YKEM S G  EN   F++++  L +   ++EA SL   +L
Sbjct: 449 YAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDIL 508

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             GI+ +V  ++ +++   + G+   AL + ++M   +   +  + V +N +  G  +LG
Sbjct: 509 SKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEM---TEKDMQFDVVAYNALTKGLLRLG 565

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           + E  + +   MI+ G+  +  TY ++++ Y   G +E AL L +EM   G+MPN V YN
Sbjct: 566 KYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYN 624

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             I  L   G +E  + VL +M+     P    +  L K   R+       ++H ++++ 
Sbjct: 625 ILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDM 684

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +   YN LI  LC+      A  +L+ M+++G+  DI+TY  LI GYC G ++E A
Sbjct: 685 GLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKA 744

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
              Y  M      PN+  YN+++ GL  +  +  A  L+   +  GL+ +A TYN L++G
Sbjct: 745 FNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSG 804

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           +   G   ++  ++ EM   G       YN+LI    K G  +QAREL+  M+  G IP+
Sbjct: 805 HGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPN 864

Query: 603 YVTYTTLVTRFSK-NCSPE 620
             TY  L+  + K +C PE
Sbjct: 865 SSTYDVLICGWCKLSCQPE 883



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 262/554 (47%), Gaps = 84/554 (15%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL------- 232
           S+  WN+ L        + +   LY EMV CG V NV + NL++++LCK   L       
Sbjct: 9   SLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGYL 68

Query: 233 -----------------------EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
                                  ++   L   M+K G+  + V  N+++   CQ+G +++
Sbjct: 69  RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQY 128

Query: 270 A----------------------LKLFRKMGVMS----------GDSVLPNSVTHNCIIN 297
           A                      +  + ++G++S           + V P+ VT+N ++N
Sbjct: 129 AEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVN 188

Query: 298 GFCKLGRVEFAEEIRYAMI------KAGI--DCNVRTY-------------ATLIDGYAR 336
            FCK G +  AE +   ++      ++G+  DC V T+              TLI  Y +
Sbjct: 189 AFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCK 248

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
               ++   L ++M+  G+MP+ V  +S ++ L   G +  A  +L +M +  + P+H +
Sbjct: 249 HRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVS 308

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ +   L ++G V +AF   +Q++   +  D      +++ L K+     A+++  +++
Sbjct: 309 YTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTIL 368

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
              L+P+ +TY  L+DG+CK G++E A  V + M+K    PN+V ++SIING  K   L+
Sbjct: 369 KLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLN 428

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  +L+   ++ ++ +   Y  L++GYF  G+   A   + EM++ G+  N + ++IL+
Sbjct: 429 KAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILL 488

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           N L + G  ++A+ L+K ++  GI  D   Y++L+  + K  +    + +  +M    + 
Sbjct: 489 NNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQ 548

Query: 636 PDNQTYNAIISPLL 649
            D   YNA+   LL
Sbjct: 549 FDVVAYNALTKGLL 562



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 221/484 (45%), Gaps = 55/484 (11%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL----- 273
            N ++   C+   +  AL L     K+G+ P++V +N ++N  C+ GDL  A  +     
Sbjct: 148 LNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEIL 207

Query: 274 -FRK---------MGVMSGDSVL---PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            FR+          GV + D +    P  VT   +I  +CK   ++    +   MI +G+
Sbjct: 208 GFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGV 267

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V T ++++ G  R G   EA  L  EM   GL PN+V Y + I  L   G V  A  
Sbjct: 268 MPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFN 327

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
             S M+ + I  D    + +  GL + G  K+A ++   +L+ ++V +  +Y  L++  C
Sbjct: 328 HQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHC 387

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K  ++  A+ +L  M    ++P+++T+ ++I+GY K G +  AV+V   M ++   PN+ 
Sbjct: 388 KVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVF 447

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL------------------------------ 530
           +Y  +++G  +    +AA    +  +  GL                              
Sbjct: 448 VYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDI 507

Query: 531 ------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
                 LD   Y++L++GYF  G  + A ++  EM    +  + V YN L   L + G Y
Sbjct: 508 LSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY 567

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            + + +   MI  G+ PD VTY +++  +      E  ++L ++M   GV P+  TYN +
Sbjct: 568 -EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNIL 626

Query: 645 ISPL 648
           I  L
Sbjct: 627 IGGL 630



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 8/379 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW--KLYKE 206
           + +L+    + G    A  V+Q++  K     + A+N     L++L   G++    ++  
Sbjct: 519 YSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRL---GKYEPKSVFSR 575

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   +  T+N V+     + K E AL L   M   G+ PN+V +N++I   C+ G 
Sbjct: 576 MIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGA 635

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E  + +  +M  +     +P  + H  ++  + +  + +   +I   ++  G++ N   
Sbjct: 636 IEKVISVLHEMLAVG---YVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMV 692

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TLI    R G +++A  +  EMV +G+  + V YN+ I        VE A    S M+
Sbjct: 693 YNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQML 752

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I P+  TY+ L +GL  NG ++ A KL +++ E  +V +A +YNIL++   +  N  
Sbjct: 753 VSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKR 812

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            + +L   MI +G IP   TY  LI  Y K G +  A ++   M    + PN   Y+ +I
Sbjct: 813 DSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLI 872

Query: 507 NGLCKDASLDAAKSLLQAS 525
            G CK +       LL+ S
Sbjct: 873 CGWCKLSCQPEMDRLLKLS 891



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 4/187 (2%)

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L+P +  +  L+  +   G +     +Y  M      PN+   N +++ LCK   L  A 
Sbjct: 6   LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL 65

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             L+ S    + D +TYNT++ G+   G   + F + SEM   G+  + V  NIL+   C
Sbjct: 66  GYLRNS----VFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYC 121

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           + G  Q A  +M  ++  G+  D +   TLV  + +       ++L +D   +GV PD  
Sbjct: 122 QIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIV 181

Query: 640 TYNAIIS 646
           TYN +++
Sbjct: 182 TYNTLVN 188


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 252/501 (50%), Gaps = 23/501 (4%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  + +K++++   ++I+++N  +      +++      + ++   G+  +V TFN +++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 225 ALCKECKLEEALSLYYRMLKSG---------------IWPNVVCFNMIINEACQVGDLEF 269
            LC E ++ EAL+L+  M+++G               + P V+ FN +IN  C  G +  
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A  L  KM    G  +  + VT+  I+NG CK+G  + A  +   M +  I  +V  Y+ 
Sbjct: 245 AAALVNKM---VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +ID   + G   +A  L  EM+++G+ PN   YN  I    + G    A  +L DMI++ 
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I PD  T++ L     + G + +A KL +++L   +  D  +YN +I   CK N    AK
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            +   M      PD++T+ T+ID YC+   ++  +Q+   + +     N   YN++I+G 
Sbjct: 422 HMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C+  +L+AA+ L Q     G+  D IT N L+ G+  N K+ EA  +F  ++   I ++ 
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V YNI+I+ +CK     +A +L   + +HG+ PD  TY  +++ F    +  +   L   
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597

Query: 629 MVLSGVSPDNQTYNAIISPLL 649
           M  +G  PDN TYN +I   L
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCL 618



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 246/485 (50%), Gaps = 17/485 (3%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +   V++N       LY++M       N+ +FN++I   C   KL  +LS + ++ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVL---------PNSVTH 292
            G  P+VV FN +++  C    +  AL LF  M   G +   ++          P  +T 
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +ING C  GRV  A  +   M+  G+  +V TY T+++G  + G ++ AL L  +M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
             + P+ V+Y++ I  L  +G    A ++ S+M++K I P+ FTY+ +  G C  G    
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L   ++E  +  D  ++N LI+   K   L  A++L   M+ R + PD +TY ++I 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G+CK    + A  +++ M      P++V +N+II+  C+   +D    LL+   R GL+ 
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           +  TYNTLI+G+     +  A  +F EM + G+  + +  NIL+   C+    ++A EL 
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +V+ +  I  D V Y  ++    K    +E  +L   + + GV PD QTYN +IS   G+
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585

Query: 652 KSAED 656
            +  D
Sbjct: 586 SAISD 590



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 219/455 (48%), Gaps = 38/455 (8%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +MV  G    V TFN +I  LC E ++ EA +L  +M+  G+  +VV +  I+N  C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272

Query: 263 QVGDLEFALKLFRKM--------------------------------GVMSGDSVLPNSV 290
           ++GD + AL L  KM                                  M    + PN  
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+NC+I+GFC  GR   A+ +   MI+  I+ +V T+  LI    + G   EA +LCDEM
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           + R + P+ V YNS I+        + A      M D    PD  T++ +    CR   V
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRV 448

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +  +L  ++    +V +  +YN LI+  C+ +NL AA+ L   MI  G+ PD IT   L
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           + G+C+   +E A++++E ++  +   + V YN II+G+CK + +D A  L  +    G+
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D  TYN +I+G+     I++A  +F +M++ G   +   YN LI    K G   ++ E
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           L+  M  +G   D  T   +        S EE+IE
Sbjct: 629 LISEMRSNGFSGDAFT-IKMAEEIICRVSDEEIIE 662



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 191/389 (49%), Gaps = 8/389 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  +V    ++G T+ A +++ K++       +  ++  +  L K         L+ EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   NV T+N +I   C   +  +A  L   M++  I P+V+ FN +I+ + + G L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KL  +M       + P++VT+N +I GFCK  R + A+ +   M       +V T+
Sbjct: 383 FEAEKLCDEM---LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 435

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID Y R    +E ++L  E+ +RGL+ N   YN+ IH      ++  A  +  +MI 
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +CPD  T +IL  G C N  +++A +L   +    +  D  +YNI+I+ +CK + +  
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  S+ + G+ PD+ TY  +I G+C    I  A  ++  MK    +P+   YN++I 
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAIT 535
           G  K   +D +  L+   +  G   DA T
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 16/234 (6%)

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           A   N +I    + N    A  L   M +R +  +I ++  LI  +C    +  ++  + 
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA--------------- 533
            + K+  +P++V +N++++GLC +  +  A +L       G L+A               
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 534 -ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            IT+NTLING  + G++ EA A+ ++M   G+ ++ V Y  ++N +CK G  + A  L+ 
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M    I PD V Y+ ++ R  K+    +   L  +M+  G++P+  TYN +I 
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 137/297 (46%), Gaps = 7/297 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+AL+ A  + G    A  +  ++  +        +N+ +    K N       ++  M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S     +V TFN +I   C+  +++E + L   + + G+  N   +N +I+  C+V +L
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  LF++M       V P+++T N ++ GFC+  ++E A E+   +  + ID +   Y
Sbjct: 484 NAAQDLFQEM---ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I G  +G   +EA  L   +   G+ P+   YN  I     +  +  A  +   M D
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
               PD+ TY+ L +G  + G + ++ +L +++      GDA++  +    +C+ ++
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 260/491 (52%), Gaps = 7/491 (1%)

Query: 141 ICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           + + TP +  F+ +V +  ++     A  + ++++VKG    +   N  ++    L ++ 
Sbjct: 3   LVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMT 62

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             + +  +++  GY  N  T N ++  LC + +++++L  + +++  G   + V +  ++
Sbjct: 63  FSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLL 122

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N  C++G+   ALKL R   ++   S  PN V +N II+G CK   V  A ++   M   
Sbjct: 123 NGLCKIGETRSALKLLR---MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           GI  NV TY+TLI G+   G   EA  L +EM+ + + PN   Y   +  L  EG V+ A
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEA 239

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L+ M  + + P+  +Y+ L  G C  G V+ A ++ + ++++ +  + YSYNI+I+ 
Sbjct: 240 KNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDR 299

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LCKS  +  A  LL  ++ + ++P+ +TY +LIDG+CK G I  A+ + + M    +  +
Sbjct: 300 LCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPAD 359

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           +V Y S+++ LCK+ +LD A +L    +  G+  +  TY  LI+G    G+   A  +F 
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQ 419

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV-TRFSKN 616
            +   G  +N   YN++I+ LCK G   +A  +   M  +G IPD VT+  ++ + F K+
Sbjct: 420 HLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKD 479

Query: 617 CSPEEVIELHD 627
            + +    LH+
Sbjct: 480 QNDKAEKLLHE 490



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/434 (31%), Positives = 229/434 (52%), Gaps = 4/434 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K      A+SL+ +M   GI P++   N++IN  C +G + F+   F  +G
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS---FTVLG 69

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      PN++T N ++ G C  G V+ +      ++  G   +  +YATL++G  + G
Sbjct: 70  KILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIG 129

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  AL+L   +  R   PN V+YN+ I  L  +  V  A  + S+M  + I P+  TYS
Sbjct: 130 ETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYS 189

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G + +AF L N+++ +++  + Y+Y IL++ LCK   +  AK LL+ M   
Sbjct: 190 TLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE 249

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P++++Y TL+DGYC  G ++ A Q++  M +    PN+  YN +I+ LCK   +D A
Sbjct: 250 GVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEA 309

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +LL+      ++ + +TY++LI+G+   G+I  A  +  EM + G   + V Y  L++ 
Sbjct: 310 MNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDA 369

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L   M   GI P+  TYT L+    K    +   +L   +++ G   +
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRIN 429

Query: 638 NQTYNAIISPLLGE 651
             TYN +IS L  E
Sbjct: 430 VWTYNVMISGLCKE 443



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 208/413 (50%), Gaps = 4/413 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             + L++     G  + +     K+  +G  +   ++   L+ L K+ E     KL + +
Sbjct: 82  TLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMI 141

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  NV  +N +I  LCK+  + EA  LY  M   GI+PNV+ ++ +I   C  G L
Sbjct: 142 EDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQL 201

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L  +M +    ++ PN  T+  +++  CK G+V+ A+ +   M K G+  NV +Y
Sbjct: 202 MEAFGLLNEMIL---KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSY 258

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL+DGY   G  + A ++   MV++G+ PN   YN  I  L     V+ A+ +L +++ 
Sbjct: 259 NTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH 318

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K++ P+  TYS L  G C+ G +  A  L  ++       D  +Y  L++ LCK+ NL  
Sbjct: 319 KNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   M  RG+ P+  TY  LIDG CKGG  + A ++++++     + N+  YN +I+
Sbjct: 379 ATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMIS 438

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
           GLCK+  LD A ++    +  G + DA+T+  +I   F   +  +A  +  EM
Sbjct: 439 GLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 39/401 (9%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P ++ FN I+    ++     A+ LF++M V     + P+  T N +IN FC LG++ F+
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQV---KGIEPDLFTLNILINCFCHLGQMTFS 64

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
                                                +  +++K G  PN +  N+ +  
Sbjct: 65  -----------------------------------FTVLGKILKLGYQPNTITLNTLMKG 89

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L  +G+V+ +L     ++ +    D  +Y+ L  GLC+ G  + A KL   + +     +
Sbjct: 90  LCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPN 149

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              YN +I+ LCK   +  A  L S M  RG+ P++ITY TLI G+C  G +  A  +  
Sbjct: 150 VVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLN 209

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M      PN+  Y  +++ LCK+  +  AK+LL    + G+  + ++YNTL++GY + G
Sbjct: 210 EMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIG 269

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++  A  MF  M   G+  N   YNI+I+ LCK     +A  L++ ++   ++P+ VTY+
Sbjct: 270 EVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYS 329

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L+  F K       ++L  +M   G   D  TY +++  L
Sbjct: 330 SLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDAL 370



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 153/301 (50%), Gaps = 1/301 (0%)

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P  + +N  +  L        A+ +   M  K I PD FT +IL    C  G +  +F +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++L+     +  + N L+  LC    +  +      ++ +G   D ++Y TL++G CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
            G    A+++   ++    +PN+V+YN+II+GLCKD  ++ A  L       G+  + IT
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y+TLI G+ + G++ EAF + +EM    I  N   Y IL++ LCK G  ++A+ L+ VM 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             G+ P+ V+Y TL+  +      +   ++   MV  GV+P+  +YN +I  L   K  +
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 656 D 656
           +
Sbjct: 308 E 308



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 45/285 (15%)

Query: 28  NPS--TEDIVFRAICVNLRQRKWKIL------EQMAPSLT--NSLVNR--VVSEFRKSPK 75
           NP+  T  I+  A+C   + ++ K L      E + P++   N+L++   ++ E + + +
Sbjct: 217 NPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQ 276

Query: 76  LALEFYTWVGEN---NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
           +   F+T V +    N +S+++     ++  L   +R D+A+ L+  ++  N V      
Sbjct: 277 M---FHTMVQKGVNPNVYSYNI-----MIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTY 328

Query: 133 EGLLDSYEICK-----------------ATPA---VFDALVRACTQIGATEGAYDVIQKL 172
             L+D +  CK                   PA    + +L+ A  +    + A  +  K+
Sbjct: 329 SSLIDGF--CKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           K +G   + + +   +  L K        KL++ ++  G   NV T+N++I  LCKE  L
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGML 446

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +EAL++  +M ++G  P+ V F +II    +    + A KL  +M
Sbjct: 447 DEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/446 (32%), Positives = 235/446 (52%), Gaps = 11/446 (2%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG-----DLEFALKL 273
           F+LV+ +L +   + +AL+L +   + G  P V+ +N +++   +       D + A ++
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           FR M V +G  V PN  T+N II G    G +E        M K GI  NV TY TLID 
Sbjct: 195 FRDM-VRNG--VSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDA 251

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             +    +EA+ L   M   G+  N + YNS I+ L  +G +     ++ +M  K + PD
Sbjct: 252 SCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+ L  G C+ G + Q   L ++++ + +  +  +Y  LIN +CK+ NL+ A ++  
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M VRGL P+  TY TLIDG+C+ G +  A +V   M      P++V YN++++G C   
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +  A  +L+     GL  D ++Y+T+I G+    ++ +AF M  EM   G+  + V Y+
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYS 491

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI  LC      +A +L + M+  G+ PD VTYT+L+  +  +    + + LHD+MV  
Sbjct: 492 SLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551

Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
           G  PDN TY+ +I+ L   K A  +V
Sbjct: 552 GFLPDNVTYSVLINGL--NKKARTKV 575



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 242/501 (48%), Gaps = 36/501 (7%)

Query: 106 NWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGA 165
           N R +DDA  +  + M  N VSP  +                 ++ ++R     G  E  
Sbjct: 184 NHRDYDDAERVFRD-MVRNGVSPNVY----------------TYNVIIRGVVSQGDLEKG 226

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
              ++K++ +G S ++  +N  +    K  ++     L + M   G   N+ ++N VI  
Sbjct: 227 LGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVING 286

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LC + ++ E   L   M   G+ P+ V +N ++N  C+ G+L   L L  +M    G  +
Sbjct: 287 LCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM---VGKGL 343

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            PN VT+  +IN  CK G +  A EI   M   G+  N RTY TLIDG+ + G   EA +
Sbjct: 344 SPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYK 403

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           +  EM+  G  P+ V YN+ +H     G V+ A+ +L  M+++ + PD  +YS +  G C
Sbjct: 404 VLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFC 463

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           R   + +AF++  +++E+ ++ D  +Y+ LI  LC    L  A  L   M+ RGL PD +
Sbjct: 464 RERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEV 523

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS-LLQA 524
           TY +LI+ YC  G +  A+++++ M +    P+ V Y+ +INGL K A    AK  LL+ 
Sbjct: 524 TYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583

Query: 525 SQRIGLLDAITYNTLI---------------NGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
                + D +TYNTLI                G+ + G + EA  +F  M       N  
Sbjct: 584 FYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAA 643

Query: 570 GYNILINFLCKFGCYQQAREL 590
            YN++I+   + G   +A  L
Sbjct: 644 IYNLMIHGHSRGGNVHKAYNL 664



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 149/295 (50%), Gaps = 8/295 (2%)

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTYSILTKGLCRNGCVKQ---- 412
           ++ V++  +  L   G V  AL +L  + ++H   P   +Y+ +   L R          
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLL-HLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYD 189

Query: 413 -AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A ++   ++   +  + Y+YN++I  +    +L      +  M   G+ P+++TY TLI
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D  CK   ++ A+ +   M       NL+ YNS+INGLC    +     L++  +  GL+
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D +TYNTL+NG+   G + +   + SEM   G++ N V Y  LIN +CK G   +A E+
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              M + G+ P+  TYTTL+  F +     E  ++  +M++SG SP   TYNA++
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 117/256 (45%), Gaps = 15/256 (5%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C Q    E A+D+ +++  +G       + + ++      E+ +  +L+ EMV  G++ +
Sbjct: 498 CLQQKLVE-AFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPD 556

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC---QVGDLEFALK 272
             T++++I  L K+ + + A  L  ++      P+ V +N +I E C   +   +E  +K
Sbjct: 557 NVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLI-ENCSNNEFKSVEGLVK 615

Query: 273 LFRKMGVMS-GDSVL---------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            F   G+M+  D V          PN+  +N +I+G  + G V  A  +   +  +   C
Sbjct: 616 GFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFAC 675

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +      L+   AR G ++E  RL   +++   + +  V    +   F EG+++  L VL
Sbjct: 676 HTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVL 735

Query: 383 SDMIDKHICPDHFTYS 398
           ++M    + PD   +S
Sbjct: 736 TEMAKDGLLPDGGIHS 751


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 171/702 (24%), Positives = 305/702 (43%), Gaps = 99/702 (14%)

Query: 41  VNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI 100
           V+L     K    +  +LT S V   +   +  P  AL+++  + +   F+   ++ C +
Sbjct: 62  VSLESTNGKCDTSLNSALTESHVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCIL 121

Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVS-----------------PLE------------F 131
           + +L N      A  L     S  SV                  PL+            F
Sbjct: 122 LLILTNSAETHRAQYLFDQFASGKSVRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHF 181

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           L+      E+ +   ++F  L+      G    A  ++++++  G       + + ++  
Sbjct: 182 LQAKARGVELDQEAYSIFVHLLCLKPNSGY---ALSLLREMRAAGWIPPEGTFTSVITAC 238

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           VK   +    +L  +MV+CG   N+     ++   C +  L  AL L   + +SG+ PN 
Sbjct: 239 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 298

Query: 252 VCFNMIINEACQVGDLEFALKLFRKM---GVMSG-------------------------- 282
           V ++++I+  C+ G++E A + + +M   G+ S                           
Sbjct: 299 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 358

Query: 283 --DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
             +S L N  T N +++  CK G++  A  +   +I  GI  NV +Y  +I G+ R  + 
Sbjct: 359 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 418

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
             A ++  EM+  G  PN V +   +   F +GD+E A  +   M D +I P   T  I+
Sbjct: 419 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 478

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
            KGLC+ G   +   L N+ + +  V     YN +I+   K  N+  A  +   M   G+
Sbjct: 479 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 538

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P  +TY +LIDG+CKG NI+ A+++  +MK+   K ++  Y ++I+G CK   + +A  
Sbjct: 539 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 598

Query: 521 LLQASQRIGL------------------------------------LDAITYNTLINGYF 544
           LL   +  GL                                     D  TY +LI+G  
Sbjct: 599 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            +G++  A  + +EM + GI  +   + +LIN LC  G ++ AR++++ M    +IP  +
Sbjct: 659 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 718

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            Y TL+    K  + +E   LHD+M+  G+ PDN TY+ +++
Sbjct: 719 IYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 231/498 (46%), Gaps = 71/498 (14%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           L+ G  M  N  S L  +  + +S  +       +  L+  C + G  E A++   ++K 
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLV--PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKT 326

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG   S+++ N+ L   +K       + ++ + +  G + NV TFN ++  LCKE K+ E
Sbjct: 327 KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNE 385

Query: 235 ALSLYYRMLKSGIWPNVVCFNMII---------NEACQV--------------------- 264
           A +L+  ++  GI PNVV +N II         N AC+V                     
Sbjct: 386 ACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMD 445

Query: 265 -----GDLEFALKLFRKM---GVMSGDSVL-----------------------------P 287
                GD+E A  +F +M    ++  D+ L                             P
Sbjct: 446 GYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVP 505

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
             + +N II+GF K G +  A  +   M + GI  +  TY +LIDG+ +G + + AL+L 
Sbjct: 506 TCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLL 565

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           ++M ++GL  +   Y + I       D++ A  +L+++    + P+ F Y+ +  G    
Sbjct: 566 NDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNM 625

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             V++A  L+ +++ E +  D  +Y  LI+ L KS  L  A  + + M+ +G++PD   +
Sbjct: 626 NNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAH 685

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI+G C  G  E A ++ E+M      P+++IYN++I G  K+ +L  A  L      
Sbjct: 686 TVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 745

Query: 528 IGLL-DAITYNTLINGYF 544
            GL+ D ITY+ L+NG F
Sbjct: 746 RGLVPDNITYDILVNGKF 763



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 143/301 (47%), Gaps = 10/301 (3%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG+  +   Y+  +H L  + +   AL +L +M      P   T++ +     + G V +
Sbjct: 187 RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 246

Query: 413 AFKLHNQVLEEHMVGDAYSYNI-----LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           A +L     ++ MV    S N+     L+   C   NL +A  L++ +   GL+P+ +TY
Sbjct: 247 ALRL-----KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTY 301

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LIDG CK GNIE A + Y  MK    + ++   NSI+ G  K  S   A ++   +  
Sbjct: 302 SVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALE 361

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
            GL +  T+NTL++     GK+ EA  ++ E+   GI+ N V YN +I   C+      A
Sbjct: 362 SGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA 421

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            ++ K M+ +G  P+ VT+T L+  + K    E    +   M  + + P + T   II  
Sbjct: 422 CKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKG 481

Query: 648 L 648
           L
Sbjct: 482 L 482


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 171/679 (25%), Positives = 305/679 (44%), Gaps = 68/679 (10%)

Query: 43  LRQRKWKILEQMAPSLTNSLVNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           L++R   +LE+       +L     S   R  P LA+  +       +    L  +    
Sbjct: 55  LQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTY 114

Query: 102 HLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
            +L++      R + AL   G L+       +     LL  +   K T    D L+    
Sbjct: 115 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTP 174

Query: 158 QIG------------------ATEGAYDVIQKLKVKGHSV---SIHAWNNFLSHLVKLNE 196
           ++G                     G  D + ++  +G +V    + A++  +    K  +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           + +   L+KEMV  G   +  T++ V++ALCK   +++A +   +M+  G+ PN   +N 
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I      G  + A+++F++M      S+LP+ VT + ++   CK G+++ A ++   M 
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEM---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G + NV +Y  +++GYA  G   +   L D M+  G+ P+   +N  I      G ++
Sbjct: 352 MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 411

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A+ + ++M D  + PD  TY  +   LCR G +  A +  NQ++++ +  D Y+Y+ LI
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 437 NYLCKSNNLAAAKQLLSSMIVRG-----------------------------------LI 461
              C   +L  AK+L+S ++  G                                   L 
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 531

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P  + Y  L+DGYC  G +E A++V++ M     +PN V+Y +++NG CK   +D   SL
Sbjct: 532 PTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSL 591

Query: 522 LQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +   + G+  + I YN +I+G F  G+   A   F EM   GIA+NK  YNI++  L K
Sbjct: 592 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFK 651

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
             C+ +A  L K +    +  + +T  T++    +    EE  +L   +  SG+ P   T
Sbjct: 652 NRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 711

Query: 641 YNAIISPLLGE---KSAED 656
           Y+ +I+ L+ E   + AED
Sbjct: 712 YSIMITNLIKEGLVEEAED 730



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/556 (24%), Positives = 263/556 (47%), Gaps = 39/556 (7%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           + L  + +   +C      +  ++    + G    A D+ +++  +G       +++ + 
Sbjct: 203 DLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVH 262

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K   + +     ++MV+ G + N  T+N +IY      + +EA+ ++  M +  I P
Sbjct: 263 ALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 322

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +VV  +M++   C+ G ++ A  +F  M  M G +  PN  ++  ++NG+   G +    
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMA-MKGQN--PNVFSYTIMLNGYATKGCLVDMT 379

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           ++   M+  GI  ++ T+  LI  YA  G  ++A+ + +EM   G+ P+ V Y + I  L
Sbjct: 380 DLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAAL 439

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G ++ A+   + MID+ + PD + Y  L +G C +G + +A +L ++++   M  D 
Sbjct: 440 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDI 499

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             ++ +IN LCK   +  A+ +    +  GL P  + Y  L+DGYC  G +E A++V++ 
Sbjct: 500 VFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL------------------- 530
           M     +PN V+Y +++NG CK   +D   SL +   + G+                   
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 531 -----------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
                            ++  TYN ++ G F N    EA  +F E+R + + +N +  N 
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I  + +    ++A++L   +   G++P  VTY+ ++T   K    EE  ++   M  +G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 634 VSPDNQTYNAIISPLL 649
             PD++  N ++  LL
Sbjct: 740 CEPDSRLLNHVVRELL 755



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/534 (23%), Positives = 247/534 (46%), Gaps = 52/534 (9%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-------LYKEMVSCGYVEN 215
           E A+D++ +L+ +G  V     N FL+ L +                L+    S      
Sbjct: 46  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 105

Query: 216 VNTFNLVIYALCKEC-----KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           V +     YA+  +C     + E AL+ + ++L++G+  N++  N ++   C+    + A
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEA 165

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYA 328
           L +        G   +P+  +++ ++   C  G+   A+++   M + G  C  +V  Y+
Sbjct: 166 LDILLHRTPELG--CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYS 223

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDG+ + G   +A  L  EMV+RG+ P+ V Y+S +H L     ++ A   L  M++K
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+++TY+ L  G    G  K+A ++  ++    ++ D  + ++L+  LCK   +  A
Sbjct: 284 GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 449 KQLLSSMIVR-----------------------------------GLIPDIITYGTLIDG 473
           + +  +M ++                                   G+ PDI T+  LI  
Sbjct: 344 RDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKA 403

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y   G ++ A+ ++  M+    KP++V Y ++I  LC+   +D A          G+  D
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              Y+ LI G+  +G + +A  + SE+ N G+ ++ V ++ +IN LCK G    A+ +  
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +  G+ P  V Y+ L+  +      E+ + + D MV +G+ P++  Y  +++
Sbjct: 524 LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVN 577



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 205/405 (50%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++A    G  + A  +  +++  G    +  +   ++ L ++ ++    + + +M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +   ++ +I   C    L +A  L   ++ +G+  ++V F+ IIN  C++G +
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G  + P +V ++ +++G+C +G++E A  +  AM+ AGI+ N   Y
Sbjct: 516 MDAQNIF-DLTVNVG--LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM+++G+ P+ ++YN  I  LF  G    A     +M +
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  +  TY+I+ +GL +N C  +A  L  ++   ++  +  + N +I  + ++  +  
Sbjct: 633 SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEE 692

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +S+   GL+P ++TY  +I    K G +E A  ++ +M+    +P+  + N ++ 
Sbjct: 693 AKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 752

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            L K   +  A + L +  +R   L+ +T   L++ +   G   E
Sbjct: 753 ELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 165/611 (27%), Positives = 279/611 (45%), Gaps = 76/611 (12%)

Query: 78  LEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD 137
           L F+ WV   + F H +    ++++ LV  R F          + A++V  L        
Sbjct: 95  LRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLF----------VPADNVRIL-------- 136

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNE 196
                         ++++C   G  +    V+ ++        ++++++  L  L K + 
Sbjct: 137 --------------MIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDM 182

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
            G    +Y EM++ G   N+ TFN +I  LC + K++EA  +   +   G  P+   +  
Sbjct: 183 DGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTS 242

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I   C+ G+L+ A ++F +   M  D   PNSVT++ +ING C  GR+E A ++   MI
Sbjct: 243 LIIGHCKNGNLDLAFEMFDR---MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI 299

Query: 317 KAGID-----------------------------------CNVRTYATLIDGYARGGSSE 341
             GI+                                    NV+TY  LI G +R G  E
Sbjct: 300 DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFE 359

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            A+ +  +M+  GL+P  V Y++ I+ L+ EG  E AL +   M+     P+  TY+++ 
Sbjct: 360 VAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVII 419

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           KG C  G +++A  + +Q+L+     +  +YNI+I+   K   +  A +LL  M   GL 
Sbjct: 420 KGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLK 479

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
            D  TY  LI G+ +GG +E A  ++  M +    PN+V YN+IING    A +D A +L
Sbjct: 480 LDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALAL 539

Query: 522 LQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                  G +  + TYN +I+G+    +I+EA     +M   G+  N + Y   I+ LCK
Sbjct: 540 FWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCK 599

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G    A ++   M      P+  TY++L+    +    E+   L DD    G  P+  T
Sbjct: 600 NGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDT 655

Query: 641 YNAIISPLLGE 651
           Y  ++  L G+
Sbjct: 656 YTTLVRGLCGK 666



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/576 (27%), Positives = 273/576 (47%), Gaps = 26/576 (4%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------EGLLD-SYEI------ 141
           A++ +L N  +  +A L+MG++    +  P  F            G LD ++E+      
Sbjct: 207 AMIKILCNKGKVQEAELIMGHIFHYGAC-PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVK 265

Query: 142 --CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
             C      + AL+      G  E A D+++++  KG   ++HA+   +  L        
Sbjct: 266 DGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCE 325

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             KL  +M   G   NV T+  +I  L ++ K E A+ +Y++ML  G+ P  V ++ +IN
Sbjct: 326 AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           +    G  E AL +F  M  +S DS LPN+ T+N II GFC +G ++ A  I   M+KAG
Sbjct: 386 QLYVEGRFETALTIFEWM--LSHDS-LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG 442

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              NV TY  +I  Y + G    A+RL + M   GL  +   Y + I      G +E A 
Sbjct: 443 PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + ++M++  I P+  TY+ +  G      V  A  L  +++E   V  + +YN++I+  
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF 562

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K+N ++ A+     M+ +GL+P++ITY + IDG CK G    A +++  MKK +  PNL
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
             Y+S+I+GLC++   + A+ LL         +  TY TL+ G    G+  EA  +   M
Sbjct: 623 CTYSSLIDGLCQEGQAEDAERLLDDGCEP---NVDTYTTLVRGLCGKGRCYEADQLVESM 679

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           +  G+  ++  Y  L+   CK    + A ++   M+  G  P    Y  L+    K    
Sbjct: 680 KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFR 739

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           ++   +   M+    + D   +  ++  LL E   +
Sbjct: 740 QKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETD 775



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 203/428 (47%), Gaps = 24/428 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A+++ L    RF+ AL +   ++S +S+   E                  ++ +++    
Sbjct: 382 ALINQLYVEGRFETALTIFEWMLSHDSLPNTE-----------------TYNVIIKGFCS 424

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           IG  + A  +  ++   G S ++  +N  +    K   +    +L + M   G   +  T
Sbjct: 425 IGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWT 484

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +  +I    +  KLE A SL+  M++ GI PNVV +N IIN    V  ++ AL LF KM 
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM- 543

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           V SG+  +P+S T+N +I+GF K  R+  AE     M+K G+  NV TY + IDG  + G
Sbjct: 544 VESGN--VPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNG 601

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  A ++  EM KR   PN   Y+S I  L  EG  E A  +L D  +    P+  TY+
Sbjct: 602 RTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCE----PNVDTYT 657

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L +GLC  G   +A +L   + ++ +      Y  L+   CK+  + +A ++  SM+  
Sbjct: 658 TLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTT 717

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P +  Y  LI   CK    + A  +++ M K     + V++  +++GL K+   D +
Sbjct: 718 GFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLS 777

Query: 519 KSLLQASQ 526
             LL   +
Sbjct: 778 LELLHVME 785



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 176/380 (46%), Gaps = 36/380 (9%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    + PN  T N +I   C  G+V+ AE I   +   G   +  TY +LI G+ + G+
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGN 252

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            + A  + D MVK G  PN+V                                   TYS 
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSV-----------------------------------TYSA 277

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC  G +++A  +  +++++ +    ++Y I I  LC +     A +LL  M  RG
Sbjct: 278 LINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRG 337

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P++ TY  LI G  + G  E A+ VY  M      P  V Y+++IN L  +   + A 
Sbjct: 338 CGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETAL 397

Query: 520 SLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           ++ +       L +  TYN +I G+   G I +A A+F +M   G + N + YNI+I+  
Sbjct: 398 TIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIY 457

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G    A  L+++M  +G+  D  TY  L++ FS+    E    L ++MV  G+SP+ 
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517

Query: 639 QTYNAIISPLLGEKSAEDQV 658
            TYNAII+  L     +D +
Sbjct: 518 VTYNAIINGYLTVAKVDDAL 537



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/416 (23%), Positives = 193/416 (46%), Gaps = 26/416 (6%)

Query: 60  NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHS------LESSCAIVHLLVNWRRFDDA 113
           ++L+N++  E R   + AL  + W+  ++   ++      ++  C+I ++      FD  
Sbjct: 381 SALINQLYVEGRF--ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 114 LLL--MGNLMSANSVSPLEFLEGLLDS----YEICKATPAVFDA-----LVRACTQIGAT 162
           L      N+++ N +  + F +G +++     E+ K      D      L+   ++ G  
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+ +  ++   G S ++  +N  ++  + + ++     L+ +MV  G V +  T+N++
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I    K  ++ EA +   +M+K G+ PNV+ +   I+  C+ G    A K+F +M     
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM---KK 615

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               PN  T++ +I+G C+ G+ E AE     ++  G + NV TY TL+ G    G   E
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDGCEPNVDTYTTLVRGLCGKGRCYE 671

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A +L + M K+GL P+  +Y + +       +VE AL +   M+     P    Y  L  
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALIC 731

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            LC+    ++A  +   +L++H   D   + +L++ L K      + +LL  M  R
Sbjct: 732 ALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/391 (20%), Positives = 160/391 (40%), Gaps = 31/391 (7%)

Query: 34  IVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHS 93
           I F+   +N   R  ++++     L       ++S F +  KL   F  +   N    H 
Sbjct: 456 IYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLF---NEMVEHG 512

Query: 94  LESSC----AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           +  +     AI++  +   + DDAL L   ++ + +V                  +   +
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNV-----------------PSSGTY 555

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           + ++   ++      A +   K+  +G   ++  + +F+  L K       +K++ EM  
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
             Y  N+ T++ +I  LC+E + E+A     R+L  G  PNV  +  ++   C  G    
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYE 671

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A +L   M       + P+   +  ++ G CK   VE A +I  +M+  G    +  Y  
Sbjct: 672 ADQLVESM---KKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKA 728

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    +    ++A  +   M+K+    + VV+   +  L  EG+ + +L +L  M  ++
Sbjct: 729 LICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN 788

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
              +  T  +L + L   GC  +  ++  Q+
Sbjct: 789 CTLNFQTRVMLARELSALGCSIEIPQISKQL 819


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 232/434 (53%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S CA++H L + + F +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  ++G    A D  +  +     V        L HL+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CKE  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A ++   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M++ G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ V YN+ I+ L  +GD
Sbjct: 238 MLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M    + PD  TY+ L  G C+ G +  AF+    +++E++  D  +Y  
Sbjct: 298 LKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M  
Sbjct: 146 NILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M++K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M + GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    EGD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   M+ +GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+LV YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 XGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M      P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + +++T+ TLI+G+  NG +  A  ++ +M +  +  + V YN LI  LCK G  +QA +
Sbjct: 244 VPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHD 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 252/484 (52%), Gaps = 6/484 (1%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           K     I  ++  L  +V++        L+ ++ S G   ++ T  ++I   C +  L  
Sbjct: 49  KHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSF 108

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A SL   +LK G  PN+V FN +IN  C  G +  A+    ++ +M+    L +  ++  
Sbjct: 109 AFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAF--RLDLMAKGYPL-DEFSYGS 165

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +ING CK G+   A ++   M +  +  N+ TY+T+IDG  +     +ALRL   +  RG
Sbjct: 166 LINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG 225

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           ++ + V YNS IH   + G    A  +L+ M+  +I PD +T++IL   LC+ G + +A 
Sbjct: 226 ILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQ 285

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +   +++     D  +YN L+   C SNN++ A++L + M+ RGL PD++ Y  LI+GY
Sbjct: 286 GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGY 345

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDA 533
           CK   ++ A+ +++ ++     PNL  YNS+I+GLCK   +   + L+ +   R    D 
Sbjct: 346 CKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDI 405

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYN  ++ +  +    +A ++F ++   GI  +   Y++++   CK    + A E ++ 
Sbjct: 406 VTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQH 464

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           +++HG  P+  TYT ++    K+CS +E + L   M  +   PD  T+  II   L E++
Sbjct: 465 LLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGA-LQERN 523

Query: 654 AEDQ 657
             D+
Sbjct: 524 ETDK 527



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 205/418 (49%), Gaps = 5/418 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+      G    A      L  KG+ +   ++ + ++ L K  +     +L ++M
Sbjct: 127 TFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKM 186

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N+ T++ VI  LCK+  + +AL L+  +   GI  +VV +N +I+  C VG  
Sbjct: 187 EEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQW 246

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +L   + +M   ++ P+  T N +++  CK GR+  A+ +   M+K G   ++ TY
Sbjct: 247 REATRL---LTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTY 303

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++G+    +  EA  L + MVKRGL P+ + YN  I+       V+ A+ +  ++  
Sbjct: 304 NALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRC 363

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K++ P+  TY+ L  GLC+ G +    +L +++ +     D  +YNI ++  CKS     
Sbjct: 364 KNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEK 423

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L    IV+G+ PD   Y  +++ +CKG  ++ A +  +++      PN+  Y  +IN
Sbjct: 424 AISLFRQ-IVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMIN 482

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
            LCKD S D A +LL +        DA+T+ T+I       +  +A  +  EM   G+
Sbjct: 483 ALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 193/428 (45%), Gaps = 39/428 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++ L  + RML+    P +  F+ ++    ++G    A+ LF ++       + P+  T
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQL---HSKGITPSIAT 92

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              +IN +C    + F                                   A  L   ++
Sbjct: 93  LTILINCYCHQAHLSF-----------------------------------AFSLLGTIL 117

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K G  PN V +N+ I+     G V  A+    D++ K    D F+Y  L  GLC+NG  +
Sbjct: 118 KMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTR 177

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A +L  ++ E+ +  +  +Y+ +I+ LCK   +A A +L S +  RG++ D++ Y +LI
Sbjct: 178 DALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLI 237

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-L 530
            G C  G    A ++   M +    P+   +N +++ LCK+  +  A+ +     + G  
Sbjct: 238 HGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEK 297

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D +TYN L+ G+ ++  ++EA  +F+ M   G+  + + YN+LIN  CK     +A  L
Sbjct: 298 PDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVL 357

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            K +    ++P+  TY +L+    K      V EL D+M   G SPD  TYN  +     
Sbjct: 358 FKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCK 417

Query: 651 EKSAEDQV 658
            K  E  +
Sbjct: 418 SKPYEKAI 425



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 159/315 (50%), Gaps = 4/315 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +++L+  C  +G    A  ++  +     +   + +N  +  L K   I     ++  M+
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   ++ T+N ++   C    + EA  L+ RM+K G+ P+V+ +N++IN  C++  ++
Sbjct: 293 KRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVD 352

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ LF+++      +++PN  T+N +I+G CKLGR+   +E+   M   G   ++ TY 
Sbjct: 353 EAMVLFKEIRC---KNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYN 409

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
             +D + +    E+A+ L  ++V+ G+ P+  +Y+  +        ++ A   L  ++  
Sbjct: 410 IFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIH 468

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
             CP+  TY+I+   LC++    +A  L +++ +     DA ++  +I  L + N    A
Sbjct: 469 GCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKA 528

Query: 449 KQLLSSMIVRGLIPD 463
           ++L   MI RGL+ D
Sbjct: 529 EKLRLEMIERGLVND 543



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 11/282 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DAL   G ++ A  V  +    G        K     ++AL+           A ++  +
Sbjct: 273 DALCKEGRIVEAQGVFAVMMKRGE-------KPDIVTYNALMEGFCLSNNVSEARELFNR 325

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +  +G    +  +N  ++   K++ +     L+KE+     V N+ T+N +I  LCK  +
Sbjct: 326 MVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGR 385

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +     L   M   G  P++V +N+ ++  C+    E A+ LFR+  ++ G  + P+   
Sbjct: 386 MSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQ--IVQG--IWPDFYM 441

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ I+  FCK  +++ AEE    ++  G   NVRTY  +I+   +  S +EA+ L  +M 
Sbjct: 442 YDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMD 501

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
                P+ V + + I  L    + + A  +  +MI++ +  D
Sbjct: 502 DNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVND 543


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 263/493 (53%), Gaps = 13/493 (2%)

Query: 145 TPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN---NFLSHLVKLNEIGR 199
           TP +F+   ++ +  ++   + A    Q++++KG    +  +N   N  SHL +LN    
Sbjct: 50  TPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFA-- 107

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + +  +++  GY  +  T N ++  LC   K++EAL+ +  +++     + V +  +IN
Sbjct: 108 -FSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLIN 166

Query: 260 EACQVGDLEFALKLFRKM-GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
             C+ G+   AL+L RK+ G++    V P+ + +  II+ FCK   V  A ++   MI  
Sbjct: 167 GLCKSGETRAALQLLRKIEGLLL---VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVK 223

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            I  NV T+ +LI G+   G  +EA+ L +EM    + PN   +N  I  L  EG+V+ A
Sbjct: 224 KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKA 283

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             VLS MI + + P+  TY+ L  G      V +A  + N +    +  + +SY+++IN 
Sbjct: 284 TSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMING 343

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LCK+  +  A +L   M ++ + P+ +TY +LIDG CK G I     + + +    +  N
Sbjct: 344 LCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPAN 403

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           ++ YNS++NGLCK+  +D A +LL   +  G+  D  TY TL++G   NG++ +A  ++ 
Sbjct: 404 IITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQ 463

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           ++   G  +N   Y ++IN LCK G + +A  L+  M  +G +PD VTY TL++   KN 
Sbjct: 464 DLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNN 523

Query: 618 SPEEVIELHDDMV 630
              + ++L  +M+
Sbjct: 524 KNGKAVKLLREMI 536



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 248/487 (50%), Gaps = 19/487 (3%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L +  H+  I  +N  LS LVK+N         ++M   G    + TFN++I      C+
Sbjct: 44  LHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQ 103

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP---- 287
           L  A S+  ++LK G  P+ V  N ++   C  G ++ AL           D V+     
Sbjct: 104 LNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFH--------DHVIRKRFH 155

Query: 288 -NSVTHNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            + V++  +ING CK G    A ++ R       +  +V  Y  +ID + +     +A  
Sbjct: 156 LDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYD 215

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L  EM+ + + PN V +NS I+     G ++ A+ +L++M   ++ P+ +T++IL  GLC
Sbjct: 216 LYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLC 275

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN--YLCKSNNLAAAKQLLSSMIVRGLIPD 463
           + G VK+A  + + ++++ +  +  +Y  L++  +L K  N   AK + +++ +RG+ P+
Sbjct: 276 KEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN--KAKHVFNTISLRGVTPN 333

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL- 522
           + +Y  +I+G CK   ++ AV++++ M      PN V Y+S+I+GLCK   +     L+ 
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 523 QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           + + R    + ITYN+L+NG   N ++ +A A+ ++M++ GI  +   Y  L++ LCK G
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             + A+ + + ++  G   +   YT ++    K    +E + L   M  +G  PD  TY 
Sbjct: 454 RLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYE 513

Query: 643 AIISPLL 649
            +IS L 
Sbjct: 514 TLISALF 520



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 228/437 (52%), Gaps = 9/437 (2%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K    + A+S   +M   GI P +  FN++IN    +  L FA  +  K+ 
Sbjct: 56  FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      P++VT N ++ G C  G+V+ A      +I+     +  +Y TLI+G  + G
Sbjct: 116 KLGYQ---PDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSG 172

Query: 339 SSEEALRLCDEMVKRGLM---PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
            +  AL+L  ++   GL+   P+ ++Y + I     +  V  A  + S+MI K I P+  
Sbjct: 173 ETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++ L  G C  G +K+A  L N++   ++  + Y++NILI+ LCK   +  A  +LS M
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           I +G+ P+++TY +L+DGY     +  A  V+  +      PN+  Y+ +INGLCK+  +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           D A  L +      +  + +TY++LI+G   +G+I++ + +  E+ N G   N + YN L
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSL 410

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           +N LCK     +A  L+  M   GI PD  TYTTLV    KN   ++   ++ D++  G 
Sbjct: 411 LNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470

Query: 635 SPDNQTYNAIISPLLGE 651
             + + Y  +I+ L  E
Sbjct: 471 PLNIRMYTVMINGLCKE 487



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 174/365 (47%), Gaps = 42/365 (11%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L  +EGLL    + +    ++ A++ +  +      AYD+  ++ VK    ++  +N+ +
Sbjct: 181 LRKIEGLL----LVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLI 236

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
                + ++     L  EM       NV TFN++I  LCKE ++++A S+   M+K G+ 
Sbjct: 237 YGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVE 296

Query: 249 PNVVCF-----------------------------------NMIINEACQVGDLEFALKL 273
           PNVV +                                   +++IN  C+   ++ A+KL
Sbjct: 297 PNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKL 356

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F++M +    ++ PN+VT++ +I+G CK GR+    ++   +   G   N+ TY +L++G
Sbjct: 357 FKEMHL---KNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNG 413

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             +    ++A+ L  +M   G+ P+   Y + +  L   G ++ A  +  D++ K    +
Sbjct: 414 LCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLN 473

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y+++  GLC+ G   +A  L +Q+ +   + DA +Y  LI+ L K+N    A +LL 
Sbjct: 474 IRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLR 533

Query: 454 SMIVR 458
            MI R
Sbjct: 534 EMIAR 538



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 153/321 (47%), Gaps = 43/321 (13%)

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+    +M  +G+ P    +N  I+       +  A  +++ ++     PD  T + L +
Sbjct: 72  AISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLR 131

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLC NG VK+A   H+ V                                   I +    
Sbjct: 132 GLCLNGKVKEALNFHDHV-----------------------------------IRKRFHL 156

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK----KPNLVIYNSIINGLCKDA-SLDA 517
           D ++YGTLI+G CK G    A+Q+   ++K+E     +P++++Y +II+  CKD   +DA
Sbjct: 157 DQVSYGTLINGLCKSGETRAALQL---LRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
                +   +    + +T+N+LI G+ I G++ EA  + +EM    +  N   +NILI+ 
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G  ++A  ++ VMI  G+ P+ VTYT+L+  +       +   + + + L GV+P+
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 638 NQTYNAIISPLLGEKSAEDQV 658
             +Y+ +I+ L   K  ++ V
Sbjct: 334 VHSYSVMINGLCKNKMVDEAV 354



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 90/181 (49%), Gaps = 5/181 (2%)

Query: 145 TP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP    + +L+    + G     +D+I ++  +G   +I  +N+ L+ L K +++ +   
Sbjct: 366 TPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIA 425

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  +M   G   +++T+  ++  LCK  +L++A  +Y  +L  G   N+  + ++IN  C
Sbjct: 426 LLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLC 485

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  + AL L  +M     +  +P++VT+  +I+   K  +   A ++   MI    DC
Sbjct: 486 KEGFFDEALSLLSQM---EDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDC 542

Query: 323 N 323
           +
Sbjct: 543 S 543



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 30/236 (12%)

Query: 78  LEFYTWVGENNRFSH-----SLESSCAIVH---LLVNW----RRFDDALLLMGNL----M 121
           ++ Y  V E N+  H     SL      VH   +++N     +  D+A+ L   +    M
Sbjct: 306 MDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNM 365

Query: 122 SANSVSPLEFLEGLLDSYEIC-----------KATPA---VFDALVRACTQIGATEGAYD 167
           + N+V+    ++GL  S  I            +  PA    +++L+    +    + A  
Sbjct: 366 TPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIA 425

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           ++ K+K +G    +  +   +  L K   +    ++Y++++  GY  N+  + ++I  LC
Sbjct: 426 LLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLC 485

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
           KE   +EALSL  +M  +G  P+ V +  +I+   +      A+KL R+M     D
Sbjct: 486 KEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARESD 541


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 247/518 (47%), Gaps = 5/518 (0%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           ++C+ T   ++ LV   ++ G    A  +++ +   G S  +  +N+ L  L K   I  
Sbjct: 467 QVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILD 526

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              ++K  +  G   NV T++ +I  L K  K++EAL L  +M++ G   N V ++ +++
Sbjct: 527 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 586

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              +VG +E A+ + R+   M     LP++VT+N +I+GF K  R+  A  +   M++AG
Sbjct: 587 GLLKVGRMEDAVVVLRQ---MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 643

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              +V TY TL  G  R G  +EA+ + D M  RG  PN + Y+S +  L   G V  AL
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 703

Query: 380 FVLSDMI-DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
                M  D+ + P    YS L  GLC+ G + +A++   +++    + D  +++ILIN 
Sbjct: 704 GYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILING 763

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LC +  +    +L   M  RG   DI  Y  +I+ YC  G    A  + E MK      N
Sbjct: 764 LCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKN 823

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
            V +  +I  LC +  +D A S   +       D I+YNTLI     + +  +A  +   
Sbjct: 824 TVTHGIVIKALCGNDRIDEAVSYFHSIPE-DCRDEISYNTLITSLVASRRSEQALELLRA 882

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G + +   Y  +++ L K G  + A +L++ M   G  PD  TYT +++  SK   
Sbjct: 883 MVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQ 942

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                +  ++M+   + PD   Y+++I         +D
Sbjct: 943 LPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDD 980



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 261/572 (45%), Gaps = 61/572 (10%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLK-VKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           C A    ++ L++   ++     AY  ++ ++  +G S ++  ++  +  L     + + 
Sbjct: 341 CSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQA 400

Query: 201 WKLYKEMVSC-GYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-----SGIWP----- 249
           W++Y+ MV+  G   N  T+  ++  LCK          + +ML+     S  WP     
Sbjct: 401 WEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPE 460

Query: 250 -----------NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
                       +V +N ++    + G +  AL L   M + SG S  P+ +T N +++G
Sbjct: 461 VDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFM-IESGLS--PDVITFNSVLDG 517

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK  R+  A  +    ++ G   NV TY+TLIDG ++    +EAL+L  +MV+ G   N
Sbjct: 518 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 577

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V Y++ +  L   G +E A+ VL  M D    PD  TY+ L  G  +   +++A  L  
Sbjct: 578 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 637

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++LE        +Y  L + LC+S     A ++L  M  RG  P+ ITY +++DG CK G
Sbjct: 638 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 697

Query: 479 NIEGAVQVYENMKKVE-KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
            +  A+  +E M + E   P+++ Y+++I+GLCK   +D A   L+   R G + D +T+
Sbjct: 698 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF 757

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + LING    G+I     +F  M   G   +   YN +IN  C  G +  A  L++ M  
Sbjct: 758 SILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKT 817

Query: 597 HGI-----------------------------IP----DYVTYTTLVTRFSKNCSPEEVI 623
           HGI                             IP    D ++Y TL+T    +   E+ +
Sbjct: 818 HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQAL 877

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           EL   MV  G SPD   Y  ++  L    S E
Sbjct: 878 ELLRAMVADGGSPDACNYMTVMDGLFKAGSPE 909



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 224/433 (51%), Gaps = 10/433 (2%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N++I  LCK  ++ +A + + + ++ G  P VV ++ +I+  C+  +++   KL  + 
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE- 61

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M+G    PN+VT+N ++N     GR + A  +   M   G    + T+  +I G  + 
Sbjct: 62  --MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  E A R+ DEMV RG +P+  ++   +H L   G V+ A F    ++     PD  TY
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + +  GL + G ++ A  +   + E       +++ I ++ L K+ NL  A +   SM  
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G+ P+ +TY  LIDG CK G ++ A+ +   ++    +  +  ++S+++GLC+   L+ 
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEE 296

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           A  LL+A   +   + + +N+L+NG     ++ EAF +F  M+  G + + + YNIL+  
Sbjct: 297 AIQLLKAMPCVP--NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 578 LCKFGCYQQARELMKVM-ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV-LSGVS 635
           LCK     +A   +++M    G  P+ VT++TL+          +  E+++ MV + G+S
Sbjct: 355 LCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414

Query: 636 PDNQTYNAIISPL 648
           P+  TY  ++  L
Sbjct: 415 PNRFTYAFLLEGL 427



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 258/533 (48%), Gaps = 33/533 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    + G    A+   +K    G   ++  ++  +  L + NE+ +  KL +EM
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N  T+N ++ AL  + + +EA SL  RM  +G  P ++ F +II   C+ G++
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A   FR +  M     +P+   H  +++  C+LGRV+ A      ++  G   +  TY
Sbjct: 123 EAA---FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T++DG  + G  E A  +   + +    P    +   +  L   G++ GA      M  
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+  TY  L  GLC+ G +  A  L   + +++     ++++ L++ LC+++ L  
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQAHRLEE 296

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A QLL +M     +P+++ + +L++G C+   ++ A ++++ MK+     +++ YN ++ 
Sbjct: 297 AIQLLKAMPC---VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK 353

Query: 508 GLCKDASLDAAKSLLQASQRIG--LLDAITYNTLINGYFINGKIAEAFAMFSEMRNV-GI 564
           GLCK   +  A   ++  +R      + +T++TLI G    G++ +A+ ++  M  V GI
Sbjct: 354 GLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGI 413

Query: 565 AVNKVGYNILINFLCKFG-------CYQQAREL--------------MKVMILHGIIPDY 603
           + N+  Y  L+  LCK G       C++Q  E               +  +++    P  
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTL 473

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           VTY TLVT  SK+    + + L + M+ SG+SPD  T+N+++  L  E+   D
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILD 526



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 247/551 (44%), Gaps = 27/551 (4%)

Query: 135 LLDSYEICKATPAV-----FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           L ++ ++ KA P V     F++L+    Q    + A+++   +K  G S  +  +N  L 
Sbjct: 294 LEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK 353

Query: 190 HLVKLNEIGRFWKLYKEMVSC-GYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGI 247
            L KL  I   ++  + M    G   NV TF+ +I  LC   ++ +A  +Y RM+   GI
Sbjct: 354 GLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGI 413

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKM------------------GVMSGDSVLPNS 289
            PN   +  ++   C+ GD     + F +M                    +      P  
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTL 473

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+N ++ G  K G V  A  +   MI++G+  +V T+ +++DG  +     +A  +   
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
            ++RG  PN V Y++ I  L     ++ AL +L+ M++     +  TYS +  GL + G 
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 593

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++ A  +  Q+ +   + DA +YN LI+   K   L  A  LL  M+  G  P ++TY T
Sbjct: 594 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 653

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L  G C+ G  + AV++ + M      PN + Y+SI++GLCK   +  A    +   R  
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 713

Query: 530 LL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           ++    I Y+ LI+G    G+I EA+     M   G   + V ++ILIN LC  G     
Sbjct: 714 VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTG 773

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            EL   M   G   D   Y  ++  +           L ++M   G++ +  T+  +I  
Sbjct: 774 LELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKA 833

Query: 648 LLGEKSAEDQV 658
           L G    ++ V
Sbjct: 834 LCGNDRIDEAV 844



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 250/542 (46%), Gaps = 35/542 (6%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ LV A    G  + A+ +++++   G    +  +   +  L K  EI   +
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++  EMV  G+V +V    ++++ALC+  +++EA   + ++L  G  P+ V +N +++  
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G LE A  + +   +++     P   T    ++G  K G +  A E   +M + G+ 
Sbjct: 187 YKAGRLEAAGMVLQ---LLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243

Query: 322 CNVRTYATLIDGYARGGSSEEALRLC-DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
            N  TY  LIDG  + G  + AL L  D+  + G+      ++S +H L     +E A+ 
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMF----AFSSLLHGLCQAHRLEEAIQ 299

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L  M      P+   ++ L  GLC+   V +AF+L + + E     D  +YNIL+  LC
Sbjct: 300 LLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 441 KSNNLAAAKQLLSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPN 498
           K   +  A + +  M    G  P+++T+ TLI G C  G +  A +VYE M  VE   PN
Sbjct: 357 KLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416

Query: 499 LVIYNSIINGLCK---------------DASLDAAKSLLQASQRIGLL-------DAITY 536
              Y  ++ GLCK               +    ++ S    S  +  L         +TY
Sbjct: 417 RFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTY 476

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTL+ G   +G + +A  +   M   G++ + + +N +++ LCK      A  + K  + 
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G  P+ VTY+TL+   SK    +E ++L   MV  G   +  TY+ ++  LL     ED
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596

Query: 657 QV 658
            V
Sbjct: 597 AV 598



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 229/519 (44%), Gaps = 68/519 (13%)

Query: 87   NNRFSHSLESSC--------AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDS 138
            +N F  +LE  C         ++  L    + D+AL L+  ++                 
Sbjct: 528  HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG-------------- 573

Query: 139  YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
               C+A    +  +V    ++G  E A  V+++++  G       +N  +    K   + 
Sbjct: 574  ---CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 630

Query: 199  RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
                L +EM+  G+  +V T+  + + LC+  + +EA+ +   M   G  PN + ++ I+
Sbjct: 631  EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 690

Query: 259  NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
            +  C+ G +  AL  F KM     + V P+ + ++ +I+G CK GR++ A E    MI+A
Sbjct: 691  DGLCKAGRVTEALGYFEKMA--RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748

Query: 319  GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            G   +V T++ LI+G    G  +  L L   M +RG   +   YN+ I+    +G+   A
Sbjct: 749  GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808

Query: 379  LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
              +L +M    I  +  T+ I+ K LC N  + +A    + + E+    D  SYN LI  
Sbjct: 809  YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITS 866

Query: 439  LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV------------ 486
            L  S     A +LL +M+  G  PD   Y T++DG  K G+ E A ++            
Sbjct: 867  LVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPD 926

Query: 487  -----------------------YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
                                   +E M +   KP+ ++Y+S+I+  CK   +D A  LL+
Sbjct: 927  LRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR 986

Query: 524  ASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRN 561
            +S   G+   IT Y+T+++    N    +A  +  EM++
Sbjct: 987  SS---GIEPTITMYSTMVDSLCKNRGTDKALEVIREMKS 1022



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 197/440 (44%), Gaps = 30/440 (6%)

Query: 90   FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
            F  S+ +   + H L    RFD+A+ ++ + M+A   +P                    +
Sbjct: 644  FHPSVVTYTTLCHGLCRSGRFDEAVEIL-DYMAARGCAP----------------NAITY 686

Query: 150  DALVRACTQIGATEGAYDVIQKLKVKGHSVSIH--AWNNFLSHLVKLNEIGRFWKLYKEM 207
             ++V    + G    A    +K+  +   V+ H  A++  +  L K   I   ++  + M
Sbjct: 687  SSIVDGLCKAGRVTEALGYFEKM-ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            +  G + +V TF+++I  LC   +++  L L+  M + G   ++  +N +IN  C  G+ 
Sbjct: 746  IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF 805

Query: 268  EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR-T 326
              A  L  +M       +  N+VTH  +I   C   R++ A    +++ +   DC    +
Sbjct: 806  SAAYALLEEMKT---HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE---DCRDEIS 859

Query: 327  YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
            Y TLI        SE+AL L   MV  G  P+   Y + +  LF  G  E A  +L +M 
Sbjct: 860  YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMR 919

Query: 387  DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
             +   PD  TY+I+  GL +   +  A     ++L +++  DA  Y+ LI+  CK++ + 
Sbjct: 920  SRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD 979

Query: 447  AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             A +LL S    G+ P I  Y T++D  CK    + A++V   MK    +P + I+ S+ 
Sbjct: 980  DAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLA 1036

Query: 507  NGLCKDASLDAAKSLLQASQ 526
                 +  +D A  L+   Q
Sbjct: 1037 TAYVAEGRVDEAVKLVNDLQ 1056



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 57/122 (46%)

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYN LING    G++ +AF  F +    G     V Y+ +I+ LC+     +  +L++ 
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M   G  P+ VTY TLV         +E   L + M  +G  P+  T+  II  L  E  
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 654 AE 655
            E
Sbjct: 122 IE 123



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%)

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V YN+LIN LCK G    A    +  I  G  P  VTY+T++    ++   ++  +L ++
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAED 656
           M   G +P+  TYN +++ LLG+  A++
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKE 89


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 227/437 (51%), Gaps = 5/437 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V ++  VI  L    +++EA  L+  +  +G  PNVV +  +I+   + G +E  LK F
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 166

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M   SG S +P   T+  +I+G CK   +  A ++   M++ G   +  TY TLIDG+
Sbjct: 167 EEM---SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF 223

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           ++    +EA +L D M+ +G  P  V Y S +H       +  A  V++ M ++   P  
Sbjct: 224 SKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGL 283

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           F ++ L       G  ++A+++  ++       D   Y  LI+ L  +  +  A+ +  S
Sbjct: 284 FIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDS 343

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           MI +G  PD +TYGT+I  + K GN+E A ++ E M K    P+   YNS+++G  K   
Sbjct: 344 MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 403

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM-RNVGIAVNKVGYN 572
           +D A  +       G+  +A+T+N L++G F +GK   AF++F EM     +    V Y 
Sbjct: 404 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYT 463

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           ILI+ L K G   +A    + MI  GIIP+  TYT+L+   +K     E  +L +DMV  
Sbjct: 464 ILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 523

Query: 633 GVSPDNQTYNAIISPLL 649
           GV+PD Q Y+A+I+ L+
Sbjct: 524 GVNPDVQAYSALITGLI 540



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 228/484 (47%), Gaps = 44/484 (9%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A ++ ++LK  G S ++ A+   +  L+K   I    K ++EM     V    T+ +VI 
Sbjct: 127 ACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVID 186

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK   L +A  ++ +M++ G  P+ + +  +I+   +   ++ A KL   + VM    
Sbjct: 187 GLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL---LDVMLTKG 243

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P +VT+  I++GFCKL  +  A+E+   M + G +  +  + +L+  Y   G +EEA 
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++  EM  RG  P+ ++Y S I  LF+ G V  A  V   MI+K   PD  TY  + +  
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G V+ A                                    ++L  M   G+ PD 
Sbjct: 364 SKIGNVEAA-----------------------------------GEILELMAKSGVGPDC 388

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KS 520
             Y +L+DGY K   ++ A  VY+ M     KPN V +N +++GL KD   D A    K 
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 448

Query: 521 LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +L+  +    L  ++Y  LI+G    G+++EAF  F EM + GI      Y  LI  L K
Sbjct: 449 MLEKEEVPPTL--VSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAK 506

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A++L++ M+  G+ PD   Y+ L+T    +   +   ++  +M+  G +P+  T
Sbjct: 507 AGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVT 566

Query: 641 YNAI 644
           Y  +
Sbjct: 567 YKVL 570



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/522 (23%), Positives = 219/522 (41%), Gaps = 73/522 (13%)

Query: 56  PSLTNSLVNRVVSEFR--------------KSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           P + + L+N+ +  FR              K+  L   ++  V    + S  + S   ++
Sbjct: 58  PQVGHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAV--TPKASLDVISYTTVI 115

Query: 102 HLLVNWRRFDDALLLMGNLMSA----NSVSPLEFLEGLLDSYEI--------------CK 143
             L + +R D+A  L   L +A    N V+    ++GLL +  I              C 
Sbjct: 116 KGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV 175

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            T   +  ++    +      A  V +++  KG       +   +    K +++    KL
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235

Query: 204 YKEMVSCGYVENVNTFNLVIYALCK----------------------------------- 228
              M++ G      T+  +++  CK                                   
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + + EEA  +   M   G  P+V+ +  +I+     G +  A  +F  M +  G    P+
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM-IEKG--CAPD 352

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           ++T+  II  F K+G VE A EI   M K+G+  +   Y +L+DGY +    ++A  + D
Sbjct: 353 ALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYD 412

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTYSILTKGLCRN 407
            MV  G+ PN V +N  +H LF +G  + A  +  +M++K  + P   +Y+IL  GL + 
Sbjct: 413 RMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKA 472

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V +AF    ++++  ++ + ++Y  LI  L K+  +  AK+L+  M+  G+ PD+  Y
Sbjct: 473 GRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAY 532

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             LI G      ++ A  V++ M K    PN V Y  +  G 
Sbjct: 533 SALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 574



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 185/402 (46%), Gaps = 6/402 (1%)

Query: 81  YTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY- 139
           YT V +    +  L  +C +   +V      D +     +   +  S ++    LLD   
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 140 -EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
            +  + T   + ++V    ++     A +VI +++ +G    +  + + LS+ +      
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             +++  EM + G   +V  +  +I  L    ++ EA  ++  M++ G  P+ + +  II
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
               ++G++E A ++     +M+   V P+   +N +++G+ KL RV+ A  +   M+ +
Sbjct: 361 QNFSKIGNVEAAGEILE---LMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 417

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV-YNSTIHWLFAEGDVEG 377
           GI  N  T+  L+ G  + G ++ A  L  EM+++  +P  +V Y   I  L   G V  
Sbjct: 418 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSE 477

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A     +MID+ I P+  TY+ L   L + G + +A KL   +++  +  D  +Y+ LI 
Sbjct: 478 AFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALIT 537

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
            L  S+ +  A  +   M+ RG  P+ +TY  L  G+   G 
Sbjct: 538 GLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR 579



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 13/308 (4%)

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G  P  V YN+ I  L +   ++ A    + MID    PD   ++ L  G C+ G  +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP----DIITYGT 469
            KL NQ L+     D + Y  +I+  CK+ +L        +   R + P    D+I+Y T
Sbjct: 62  HKLLNQALK-RFRPDVFLYTSVIHGYCKAGDL-------DTGYFRAVTPKASLDVISYTT 113

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRI 528
           +I G      I+ A +++E +K     PN+V Y ++I+GL K   + D  K+  + S   
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
            +    TY  +I+G      + +A  +F +M   G   + + Y  LI+   K     +AR
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L+ VM+  G  P  VTY ++V  F K     E  E+   M   G  P    + +++S  
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 649 LGEKSAED 656
           L +  AE+
Sbjct: 294 LSKGRAEE 301



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 4/171 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFW 201
           K     F+ L+    + G T+ A+ + +++  K     ++ ++   +  L K   +   +
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             ++EM+  G +   +T+  +IY+L K  ++ EA  L   M+K G+ P+V  ++ +I   
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
                ++ A  +F++M         PN VT+  +  GF   GR    E ++
Sbjct: 540 IDSSMVDTAWDVFQEM---MKRGCAPNEVTYKVLRRGFRAAGRALDLEAVK 587


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 239/474 (50%), Gaps = 4/474 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G    ++  N  ++    L  +G  + +  +++  G   +  TFN +I  LC E K+ EA
Sbjct: 180 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 239

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L L+ + +  G  P+VV +  ++N  C+VG+   A++L R    M   +  PN + +N I
Sbjct: 240 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRS---MVQKNCRPNVIAYNTI 296

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+  CK  +V  A  +   MI  GI  ++ TY +LI         +    L +EMV   +
Sbjct: 297 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           MPN VV+++ +  L  EG +  A  V+  MI + + PD  TY+ L  G C    + +A K
Sbjct: 357 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 416

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           + + ++ +  V +  SYNILIN  C+   +  A  LL  M ++GLI D +TY TLI G C
Sbjct: 417 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 476

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
             G ++ A+ ++  M    + P+LV Y  +++ LCK+  L  A  LL+A +   L  D +
Sbjct: 477 HVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADIL 536

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN  I+G    G++  A  +FS + + G+  +   YNI+I+ LCK G   +A +L + M
Sbjct: 537 VYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 596

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +G   D   Y T++  F ++       +L  +M+  G S D  T   I+  L
Sbjct: 597 DENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 221/431 (51%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F  ++ ++ K       LSL  +M   GI P+V   N++IN  C +  L +A  +  K+ 
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 212

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      P++ T N +I G C  G++  A  +    I  G   +V TY TL++G  + G
Sbjct: 213 KLGCQ---PDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVG 269

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           ++  A+RL   MV++   PN + YN+ I  L  +  V  A  + S+MI K I PD FTY+
Sbjct: 270 NTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYN 329

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L   LC     K    L N+++   ++ +   ++ +++ LCK   +A A  ++  MI R
Sbjct: 330 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 389

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD++TY  L+DG+C    ++ AV+V++ M      PN+  YN +ING C+   +D A
Sbjct: 390 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 449

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL+     GL+ D +TYNTLI+G    G++  A A+F EM   G   + V Y IL+++
Sbjct: 450 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 509

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L+K +    +  D + Y   +    +    E   +L  ++   G+ PD
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569

Query: 638 NQTYNAIISPL 648
            +TYN +I  L
Sbjct: 570 VRTYNIMIHGL 580



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 220/450 (48%), Gaps = 4/450 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F+ L+R     G    A  +  K   +G    +  +   ++ L K+       
Sbjct: 216 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 275

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L + MV      NV  +N +I +LCK+ ++ EA +L+  M+  GI P++  +N +I+  
Sbjct: 276 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C + + +    L  +M       ++PN V  + +++  CK G +  A ++   MIK G++
Sbjct: 336 CNLCEWKHVTTLLNEM---VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY  L+DG+      +EA+++ D MV +G +PN   YN  I+       ++ A+ +
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M  + +  D  TY+ L  GLC  G ++ A  L ++++    + D  +Y IL++YLCK
Sbjct: 453 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 512

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +++LA A  LL ++    L  DI+ Y   IDG C+ G +E A  ++ N+     +P++  
Sbjct: 513 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 572

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +I+GLCK   LD A  L +     G   D   YNT+I G+  + +   A  +  EM 
Sbjct: 573 YNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEML 632

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQAREL 590
             G + +     +++  L   G  Q    L
Sbjct: 633 AEGFSADVSTTTLIVEMLSDDGLDQSFERL 662



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 1/243 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A    N++L  H       +  L+  + K  + +    L + M   G+ PD+ T   
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+ +C    +  A  V   + K+  +P+   +N++I GLC +  +  A  L   +   G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D +TY TL+NG    G  + A  +   M       N + YN +I+ LCK     +A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   MI  GI PD  TY +L+      C  + V  L ++MV S + P+   ++ ++  L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 649 LGE 651
             E
Sbjct: 371 CKE 373



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 1/207 (0%)

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           N L  A    + M+     P  + +  L+    K  +    + +   M      P++   
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +IN  C    L  A S+L    ++G   D  T+NTLI G  + GKI EA  +F +   
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   + V Y  L+N LCK G    A  L++ M+     P+ + Y T++    K+    E
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 308

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
              L  +M+  G+SPD  TYN++I  L
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHAL 335


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 233/434 (53%), Gaps = 10/434 (2%)

Query: 80  FYTWVG--ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS---ANSVSPLEFLEG 134
           F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S    NS S +     
Sbjct: 1   FFTWLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAV--FAA 58

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 59  ILETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 118

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  YKE++ CGY  ++  FN++++  CKE  +  ALS++  + K G+ P+VV F
Sbjct: 119 KYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSF 178

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 179 NTLMNGYIRLGDLDEG---FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDE 235

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD
Sbjct: 236 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGD 295

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD  +Y+ L  G C+ G ++ AF+   ++++E++  D  +Y  
Sbjct: 296 LKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTA 355

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 356 LISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 415

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 416 HVPSVVTYNVLMNG 429



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 158/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A  +  A+ K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 144 NILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 203

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 204 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 263

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD I+Y TLID
Sbjct: 264 AMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLID 323

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 324 GCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRP 383

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G +     +  EM+  G   + V YN+L+N
Sbjct: 384 DTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 428



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 1/299 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EGD+  AL V   +    + P   +++ L  G  R G
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   M+ +GL+P+ +T+ 
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 249

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A++VY+ M      P+L+ YN++I GLCK   L  A+ L+   +  
Sbjct: 250 TLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK 309

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D I+Y TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    A
Sbjct: 310 GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDA 369

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            ++++ M+  G+ PD  TYT ++  F K        +L  +M   G  P   TYN +++
Sbjct: 370 EKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 428



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A  +  ++   GL P ++++ TL
Sbjct: 122 KLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTL 181

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 182 MNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGL 241

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 242 VPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 301

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD ++YTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 302 LIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLC 361

Query: 650 GEKSAED 656
            E  + D
Sbjct: 362 QEGRSID 368



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 57/286 (19%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLI 471
           +SY  +I++LC    L  AK L+  ++ R                      DI  +  LI
Sbjct: 18  HSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGLI 77

Query: 472 DGYCKGGNIEGAVQVY-------------------ENMKKVEK----------------K 496
             Y + G +  A++ Y                   E++ K++                  
Sbjct: 78  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYP 137

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAM 555
            +L  +N +++  CK+  +  A S+  A  + GL  ++ ++NTL+NGY   G + E F +
Sbjct: 138 ASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 197

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            S M   G+  +   Y++LIN LCK      A EL   M+  G++P+ VT+TTL+    K
Sbjct: 198 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 257

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
           N   +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 258 NGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 303


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 267/515 (51%), Gaps = 15/515 (2%)

Query: 152 LVRACTQIGA------TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           +V  CT +G        +  Y++  K+   G S+ +  +N  L  L K  ++    KL  
Sbjct: 181 VVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLD 240

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +++  G + N+ T+N  I  LC++ +L+ A+ +  R++  G  P+VV +N +I   C+  
Sbjct: 241 KVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNS 300

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
             + A +++  +G +  + + P+S T+N +I G+CK G V+ AE I    +  G   +  
Sbjct: 301 KFQEA-EVY--LGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF 357

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY +LIDG    G +  AL L +E + +G+ PN ++YN+ I  L  +G +  A  + S+M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            +K + P+  T++IL  GLC+ GCV  A  L   ++ +    D +++NILI+       +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A ++L  M+  G+ PD+ TY +L++G CK    E  ++ Y+ M +    PNL  +N +
Sbjct: 478 ENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNIL 537

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV-G 563
           +  LC+   LD A  LL+  +   +  DA+T+ TLI+G+  NG +  A+ +F +M  V  
Sbjct: 538 LESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYM 597

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           ++ +   YNI+I+   +      A +L + M+   + PD  TY  +V  F K  + +   
Sbjct: 598 VSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGY 657

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +   +M+ +G  P   T   +I+ L      ED+V
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCL----CVEDRV 688



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 235/482 (48%), Gaps = 12/482 (2%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL------VIYALCKECKLEEA 235
           H  + + S + KL   G+F  +  E V     +NV    L       +    ++ K++EA
Sbjct: 38  HTLSTYRSIIEKLGLYGKFEAM--EEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEA 95

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           ++++ RM      P V  +N I++     G  + A K++ +M       + P+  +    
Sbjct: 96  VNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRM---RDRGITPDVYSFTIR 152

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           +  FC+  R   A  +   M   G + NV  Y T++ G+      +E   L  +M+  G+
Sbjct: 153 MKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
                 +N  +H L  +GDV+    +L  +I + + P+ FTY+   +GLC+ G +  A +
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR 272

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +  +++++    D  +YN LI  LCK++    A+  L  ++  GL PD  TY TLI GYC
Sbjct: 273 MVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYC 332

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           KGG ++ A ++  N       P+   Y S+I+GLC +   + A +L   +   G+  + I
Sbjct: 333 KGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YNTLI G    G I EA  + SEM   G+      +NIL+N LCK GC   A  L+KVM
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           I  G  PD  T+  L+  +S     E  +E+ D M+ +GV PD  TYN++++ L      
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKY 512

Query: 655 ED 656
           ED
Sbjct: 513 ED 514



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 273/603 (45%), Gaps = 70/603 (11%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD-- 111
           M P L    V  V+   +K P  ALE +  + + + F H+L +  +I+  L  + +F+  
Sbjct: 1   MGPPLLPKHVTTVI-RCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAM 59

Query: 112 -----DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAY 166
                D    +GN M          LEG             V+   ++   + G  + A 
Sbjct: 60  EEVLVDMRQNVGNHM----------LEG-------------VYVGAMKNYGRKGKVQEAV 96

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           +V +++       ++ ++N  +S LV                  GY              
Sbjct: 97  NVFERMDFYDCEPTVFSYNAIMSILV----------------DSGY-------------- 126

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
                 ++A  +Y RM   GI P+V  F + +   C+      AL+L   M   S     
Sbjct: 127 -----FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNM---SSQGCE 178

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            N V +  ++ GF +    +   E+   M+ +G+   + T+  L+    + G  +E  +L
Sbjct: 179 MNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKL 238

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D+++KRG++PN   YN  I  L  +G+++ A+ ++  +ID+   PD  TY+ L  GLC+
Sbjct: 239 LDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCK 298

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           N   ++A     +++ E +  D+++YN LI   CK   +  A+++L + +  G +PD  T
Sbjct: 299 NSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFT 358

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y +LIDG C  G    A+ ++        KPN+++YN++I GL     +  A  L     
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418

Query: 527 RIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             GL+  + T+N L+NG    G +++A  +   M + G   +   +NILI+        +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A E++ VM+ +G+ PD  TY +L+    K    E+V+E +  MV  G +P+  T+N ++
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538

Query: 646 SPL 648
             L
Sbjct: 539 ESL 541



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 229/492 (46%), Gaps = 34/492 (6%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + F+ L+    + G  +    ++ K+  +G   ++  +N F+  L +  E+    ++   
Sbjct: 217 STFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGR 276

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           ++  G   +V T+N +IY LCK  K +EA     +++  G+ P+   +N +I   C+ G 
Sbjct: 277 LIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGM 336

Query: 267 LEFALKLF-----------------------------RKMGVMS---GDSVLPNSVTHNC 294
           ++ A ++                              R + + +   G  + PN + +N 
Sbjct: 337 VQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I G    G +  A ++   M + G+   V+T+  L++G  + G   +A  L   M+ +G
Sbjct: 397 LIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+   +N  IH    +  +E AL +L  M+D  + PD +TY+ L  GLC+    +   
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVM 516

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           + +  ++E+    + +++NIL+  LC+ + L  A  LL  M  + + PD +T+GTLIDG+
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGF 576

Query: 475 CKGGNIEGAVQVYENMKKVEKKP-NLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLD 532
           CK G+++GA  ++  M++V     +   YN II+   +  ++  A+ L Q    R    D
Sbjct: 577 CKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPD 636

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             TY  +++G+   G +   +    EM   G   +      +IN LC      +A  ++ 
Sbjct: 637 GYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH 696

Query: 593 VMILHGIIPDYV 604
            M+  G++P+ V
Sbjct: 697 RMVQKGLVPEAV 708



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 181/396 (45%), Gaps = 8/396 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +L+      G T  A  +  +   KG   ++  +N  +  L     I    +L  EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G +  V TFN+++  LCK   + +A  L   M+  G +P++  FN++I+       +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL++   + VM  + V P+  T+N ++NG CK  + E   E    M++ G   N+ T+
Sbjct: 478 ENALEI---LDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTF 534

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++   R    ++AL L +EM  + + P+ V + + I      GD++GA  +   M +
Sbjct: 535 NILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594

Query: 388 KHICP-DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            ++      TY+I+         V  A KL  ++++  +  D Y+Y ++++  CK+ N+ 
Sbjct: 595 VYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVD 654

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              + L  M+  G IP + T G +I+  C    +  A  +   M +    P  V  N+I 
Sbjct: 655 LGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIF 712

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           +   K+ +  A K +L+   +   +    Y  L +G
Sbjct: 713 DHDKKEVA--APKLVLEDLLKKSCITYYAYELLFDG 746



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 161/324 (49%), Gaps = 4/324 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    +++ L++  +  G    A  +  ++  KG    +  +N  ++ L K+  +     
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L K M+S GY  ++ TFN++I+    + K+E AL +   M+ +G+ P+V  +N ++N  C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLC 507

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +    E  ++ ++ M V  G +  PN  T N ++   C+  +++ A  +   M    ++ 
Sbjct: 508 KTSKYEDVMETYKTM-VEKGCA--PNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP 564

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP-NNVVYNSTIHWLFAEGDVEGALFV 381
           +  T+ TLIDG+ + G  + A  L  +M +  ++  +   YN  IH    + +V  A  +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+D+ + PD +TY ++  G C+ G V   +K   +++E   +    +   +IN LC 
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684

Query: 442 SNNLAAAKQLLSSMIVRGLIPDII 465
            + +  A  ++  M+ +GL+P+ +
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVPEAV 708


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 255/502 (50%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ A +RA  +    +GA  ++ +++ +G   S   +N  +  L K   +    ++   M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G   +  T+  ++Y  C+  +LE AL + + M++ G  P+    + +I+E  +   +
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A  L  K+G +    ++PN   +N +I+  CK  R + A+ +   M   G++ N  TY
Sbjct: 320 EEAFSLACKLGDLG---MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 376

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           A LI    + G  E+AL L D+M  +G+      YNS I+    +G ++ A  +LS M+ 
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P   +YS L  GLCRNG +  A +LH ++ E  +  + Y++  LIN  CK   +  
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L   MI   +IP+ +T+  +I+GYC  GNI  A Q+Y+ M ++  KP+   Y S+I+
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC  + +  A   +        +L+  +   L+ G F  G+  E + ++ EM   G+ +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKL 616

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V + I++    K    +++  L + M   G+ PD + YT ++   SK  +  + +   
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           D MV+ G SP+  T+  +I+ L
Sbjct: 677 DQMVIDGYSPNTVTHTVLINNL 698



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 250/548 (45%), Gaps = 20/548 (3%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++  L    RFDDA  L    M+   + P E                  +  L+ A  +
Sbjct: 343 ALIDKLCKNERFDDADRLFKE-MAGRGLEPNE----------------VTYAILIHALCK 385

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A  +  K++ KG  V+++ +N+ ++   K   + R   L   MV  G      +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++ +I  LC+   L  A+ L+  M + GI  N   F  +IN  C+   ++ A +LF KM 
Sbjct: 446 YSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM- 504

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                +V+PN VT N +I G+C +G +  A ++   M++ G+  +  TY +LI G     
Sbjct: 505 --IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              +A     ++     + NN    + ++ LF EG       +  +M  + +  D  +++
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           I+     +    +++  L  ++ E+ +  D   Y  +I+ L K  N+  A      M++ 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVID 682

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P+ +T+  LI+  CK G +  A  + + M      PN   YN  ++    +  ++ A
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           K L  A  +  L   +++N LI G    GKI EA  +  ++   G + + + Y+ +I+ L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHEL 802

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G   +A EL   M+  G+ PD V Y   +   + +   ++ + ++ +M+ SGV P+ 
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862

Query: 639 QTYNAIIS 646
            TY A++S
Sbjct: 863 DTYRALLS 870



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 235/514 (45%), Gaps = 39/514 (7%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +V+ +  +  L  LVK+ +      L+ +M+  G   +   +   I A C+   L+ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L  RM   G+  + V +N+++   C+   ++ A+++     VM    V  + VT+  +
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV---KNVMVNIGVTADEVTYRTL 274

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGI-----DC---------------------------- 322
           + GFC++  +E A  I + MI+ G      +C                            
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 323 --NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV  Y  LID   +    ++A RL  EM  RGL PN V Y   IH L   G +E AL 
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +   M DK I    + Y+ L  G C+ G + +A  L + +++E +   A SY+ LI  LC
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           ++ +L++A +L   M  RG+  +  T+  LI+G+CK   ++ A ++++ M      PN V
Sbjct: 455 RNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            +N +I G C   ++  A  L      +GL  D  TY +LI+G  +   +++A    +++
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
            N    +N      L+  L + G + +   L   M + G+  D V++T +V    K    
Sbjct: 575 ENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           E+   L  +M   GV PD+  Y  +I  L  E++
Sbjct: 635 EKSCVLFREMKEQGVKPDDIFYTCMIDALSKEEN 668



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 205/405 (50%), Gaps = 4/405 (0%)

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S G   N  T + ++++L K  +   A  L+ +ML+SG+  +   +   I   C+  +L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L  +M     + V  ++V +N ++ G CK  RV+ A E++  M+  G+  +  TY
Sbjct: 215 DGARGLVVRM---ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTY 271

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL+ G+ R    E ALR+  +M++ G +P+    +  I  L  +  VE A  +   + D
Sbjct: 272 RTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGD 331

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+ F Y+ L   LC+N     A +L  ++    +  +  +Y ILI+ LCK   +  
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   M  +G+   +  Y +LI+GYCK G+++ A  +   M K    P    Y+ +I 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC++  L +A  L +     G+  +  T+  LING+  + K+ EA  +F +M +  +  
Sbjct: 452 GLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           N+V +N++I   C  G  ++A +L   M+  G+ PD  TY +L++
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 186/408 (45%), Gaps = 36/408 (8%)

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +G+     +  N  T + I+    K+ +   A ++   M+++G+  +   Y   I  Y  
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
             + + A  L   M   G+  + V YN  ++ L     V+ A+ V + M++  +  D  T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 397 YSILTKGLCR-----------------------------------NGCVKQAFKLHNQVL 421
           Y  L  G CR                                      V++AF L  ++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  MV + ++YN LI+ LCK+     A +L   M  RGL P+ +TY  LI   CK G IE
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLI 540
            A+ +++ M+    K  +  YNS+ING CK  SLD A+ LL    + GL   A +Y+ LI
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            G   NG ++ A  +  EM   GIA N   +  LIN  CK     +A  L   MI   +I
Sbjct: 451 AGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+ VT+  ++  +    +  +  +L+D MV  G+ PDN TY ++IS L
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 1/342 (0%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + +GI  N  T + ++    +      A  L D+M++ G+  +  VY + I       ++
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +GA  ++  M  + +      Y++L  GLC+N  V++A ++ N ++   +  D  +Y  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +   C+   L  A ++   MI  G +P       +ID   K   +E A  +   +  +  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  YN++I+ LCK+   D A  L +     GL  + +TY  LI+     G I +A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F +MR+ GI V    YN LIN  CK G   +AR L+  M+  G+ P   +Y+ L+    
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +N      +ELH +M   G++ +N T+ A+I+    +K  ++
Sbjct: 455 RNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 190/424 (44%), Gaps = 6/424 (1%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
            N   S ++E    +    + W  +    L+ G              + ++DS  I    
Sbjct: 455 RNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI--PN 512

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
              F+ ++     +G    A+ +  ++   G     + + + +S L   + + +  +   
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           ++ +   V N  +   ++Y L +E +  E   L+  M   G+  ++V F +I+  A +  
Sbjct: 573 DLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D E +  LFR+M       V P+ + + C+I+   K   +  A      M+  G   N  
Sbjct: 633 DKEKSCVLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTV 689

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+  LI+   + G    A  LC EM+   ++PN   YN  + +   EGD+E A  + S M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +  H+     +++IL KGLC+ G +++A  L  ++ E     D  SY+ +I+ LCK  ++
Sbjct: 750 LQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L + M+ +GL PD++ Y   I      G  + A+ +Y NM +   +PN   Y ++
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 506 INGL 509
           ++G+
Sbjct: 869 LSGI 872


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 224/445 (50%), Gaps = 5/445 (1%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ EM   G   +  T+ ++I  LCK  K   A+ L+ +M K     +V  + MII+  
Sbjct: 98  QLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDSL 156

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G    AL +F +M    G  +LP+ V ++ +++G C+ GR++ A E    M   GI 
Sbjct: 157 CKDGMTTEALDMFSEM---IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY +LI G +R G  +E     + MV RG  P+   +   I  L  EG V  A  +
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M  K   PD  TY+ L  GLC  G ++ A KL   + +  +  + +SYNILIN  CK
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A +L   M  +GL P  +TY TLI   C+ G +  A +++  M+   +   L  
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +++GLCK+  L+ A  L Q+ ++      I  ++ L++G    GK+ EA+  F E+ 
Sbjct: 394 YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 453

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  + + YNILIN LC  G   +A +L+  M   G +PD +T+  ++    K     
Sbjct: 454 KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH 513

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           E I+L ++M     SPD    + ++
Sbjct: 514 EAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 224/450 (49%), Gaps = 7/450 (1%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G+  +  T   ++  +  E  + +A+ L+  M + G++ +   + ++IN  C+      A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 271 LKLFRKM-GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           +KL  KM G   GD       T+  II+  CK G    A ++   MI AGI  +V  Y++
Sbjct: 132 IKLHEKMKGNCKGDVF-----TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSS 186

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+DG  R G  +EAL    EM  RG+  +   YNS IH L   G  +   + L+ M+D+ 
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             PD FT++IL  GLC+ G V +A ++   +  +    D  +YN L+N LC    L  A 
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L  S+  RG+  ++ +Y  LI+GYCK   I+ A +++E M+    KP+ V YN++I  L
Sbjct: 307 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366

Query: 510 CKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C+   +  A+ L    Q  G  L   TY  L++G   NG + EA  +F  ++      N 
Sbjct: 367 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNI 426

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             ++IL++ +C+ G  ++A +    +  +G+ PD + Y  L+          E ++L   
Sbjct: 427 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           M   G  PD+ T+N II  LL E    + +
Sbjct: 487 MEEKGCLPDSITFNVIIQNLLKENEIHEAI 516



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 191/419 (45%), Gaps = 36/419 (8%)

Query: 263 QVGDLEFALK-LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           Q  D+ ++L  LF+     SG +     +     ++ F  L  V     +    +K G +
Sbjct: 15  QKSDIPYSLSSLFKNPPQRSGSNSKSEKIGTKASLSPFESLRAVGCGFGVFGGFLKRGFE 74

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL-------------------------- 355
            +  T  TL+ G        +A++L DEM ++GL                          
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 356 ---MPNN-----VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
              M  N       Y   I  L  +G    AL + S+MI   I PD   YS L  GLCR 
Sbjct: 135 HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 194

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +K+A +   ++    +  D Y+YN LI+ L ++         L+ M+ RG  PD  T+
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTF 254

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LIDG CK G +  A Q+ E M    K+P+++ YN+++NGLC    L+ A  L ++   
Sbjct: 255 TILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD 314

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+ L+  +YN LINGY  + KI EAF +F EMR  G+  + V YN LI  LC+ G  + 
Sbjct: 315 RGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           A++L   M   G      TY  L+    KN   EE I+L   +  +   P+ + ++ ++
Sbjct: 375 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 186/385 (48%), Gaps = 9/385 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  ++ +  + G T  A D+  ++   G    +  +++ +  L +   +    
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 201

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + +KEM   G   +V T+N +I+ L +    +E       M+  G  P+   F ++I+  
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +  A ++     +M      P+ +T+N ++NG C +G++E A ++  ++   GI 
Sbjct: 262 CKEGKVGEAQQILE---LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 318

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV +Y  LI+GY +    +EA RL +EM  +GL P+ V YN+ I  L   G V  A  +
Sbjct: 319 LNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 378

Query: 382 LSDMIDKHICPDHF---TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +M     C       TY +L  GLC+NG +++A  L   + +     +   ++IL++ 
Sbjct: 379 FVEM---QTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDG 435

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           +C++  L  A +    +   GL PD I Y  LI+G C  G +  AV++   M++    P+
Sbjct: 436 MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 495

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQ 523
            + +N II  L K+  +  A  LL+
Sbjct: 496 SITFNVIIQNLLKENEIHEAIQLLE 520



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 178/362 (49%), Gaps = 9/362 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL---NEIGRFWKLY 204
           V+ +L+    + G  + A +  ++++ +G S  ++ +N+ +  L +     E+  F  L 
Sbjct: 183 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL- 241

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             MV  G+  +  TF ++I  LCKE K+ EA  +   M   G  P+++ +N ++N  C V
Sbjct: 242 --MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLV 299

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G LE A KLF  +   +   +  N  ++N +ING+CK  +++ A  +   M   G+  + 
Sbjct: 300 GQLEDATKLFESL---ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPST 356

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY TLI    + G    A +L  EM   G       Y   +  L   G +E A+ +   
Sbjct: 357 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQS 416

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           +      P+   +SIL  G+CR G +++A+K  +++ +  +  D  +YNILIN LC    
Sbjct: 417 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 476

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L+ A +LL  M  +G +PD IT+  +I    K   I  A+Q+ E M+     P+  + + 
Sbjct: 477 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 536

Query: 505 II 506
           ++
Sbjct: 537 LL 538


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 175/634 (27%), Positives = 294/634 (46%), Gaps = 59/634 (9%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           +++P+ T + +   +     S  +   FY W  +   F  S      ++H L     FD 
Sbjct: 49  RLSPNFTPTQLLHSLRREEDSSAVIHLFY-WASKQPNFKPSSSIFKEVLHKLGKAGEFDA 107

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
              ++  +  + SV   + L   ++SY    A+  +++ +++    + A E  + V+   
Sbjct: 108 MKDILKEMKISLSVIDNDSLLVFIESY----ASFGLYNEILQF---VDAMEVEFGVV--- 157

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
                  + H +N  L+ LV  N++      +  MVS G   +V+TFN++I ALC+  ++
Sbjct: 158 ------ANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQI 211

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIIN-------------------EA------------ 261
             A+ L   M   G+ P+   F  I+                    EA            
Sbjct: 212 RPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVL 271

Query: 262 ----CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
               C+ G +E AL+   +M +  G    P+  T N ++NG  K G V+ A E+   M++
Sbjct: 272 VNGFCKEGRIEEALRFIEEMSLREG--FFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLR 329

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G D ++ TY +LI G  + G  +EA+++ ++M++R   PN V YN+ I  L  E  VE 
Sbjct: 330 EGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEE 389

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLC--RNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           A  +   +  K I PD  TY+ L +GLC  RN  V  A +L+ ++  +    D ++YN+L
Sbjct: 390 ATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTV--AMELYKEMKTKGCHPDEFTYNML 447

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ LC    L  A  LL  M V G   ++ITY TLIDG+CK   I  A ++++ M+    
Sbjct: 448 IDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGV 507

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFA 554
             N V YN++I+GLCK   ++ A  L+      GL  D  TYN+L+  +   G I +A  
Sbjct: 508 SRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD 567

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +   M + G   + V Y  LI  LCK G  + A +L++ + + GI      Y  ++    
Sbjct: 568 IVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALF 627

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +    +E + L  +M+    +PD  TY  +   L
Sbjct: 628 RRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGL 661



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 253/498 (50%), Gaps = 7/498 (1%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           +L+  L  A+ + P   L   ++ + +       F  +++   + G  +GA  V +++  
Sbjct: 200 ILIKALCRAHQIRPAILLMEEMEDFGLL-PDEKTFTTIMQGFIEEGNLDGAMRVKEQMVE 258

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM-VSCGYVENVNTFNLVIYALCKECKLE 233
            G  V+    N  ++   K   I    +  +EM +  G+  +  TFN+++  L K   ++
Sbjct: 259 AGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVK 318

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            AL +   ML+ G  P++  +N +I+  C++G+++ A+K+  +M  +  D   PN+VT+N
Sbjct: 319 HALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM--IERDCS-PNTVTYN 375

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            II+  CK  +VE A ++   +   GI  +V TY +LI G     +   A+ L  EM  +
Sbjct: 376 TIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTK 435

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G  P+   YN  I  L   G ++ AL +L +M       +  TY+ L  G C+N  + +A
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            ++ +Q+  + +  ++ +YN LI+ LCKS  +  A QL+  MI+ GL PD  TY +L+  
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTY 555

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           +CK G+I+ A  + + M     +P++V Y ++I GLCK   ++AA  LL+  Q  G+ L 
Sbjct: 556 FCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLT 615

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK-FGCYQQARELM 591
              YN +I   F   +  EA  +F EM     A + V Y I+   LC+  G   +A + +
Sbjct: 616 PHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFV 675

Query: 592 KVMILHGIIPDYVTYTTL 609
             M+  G +P++ ++  L
Sbjct: 676 MEMLERGYVPEFSSFYML 693



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 197/374 (52%), Gaps = 2/374 (0%)

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V+ N+  +N ++N      +++  E     M+  GI  +V T+  LI    R      A+
Sbjct: 156 VVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAI 215

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L +EM   GL+P+   + + +     EG+++GA+ V   M++      + T ++L  G 
Sbjct: 216 LLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGF 275

Query: 405 CRNGCVKQAFKLHNQV-LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           C+ G +++A +   ++ L E    D Y++N+L+N L K+ ++  A +++  M+  G  PD
Sbjct: 276 CKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPD 335

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I TY +LI G CK G ++ AV+V   M + +  PN V YN+II+ LCK+  ++ A  L  
Sbjct: 336 IYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLAL 395

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G+L D  TYN+LI G  ++     A  ++ EM+  G   ++  YN+LI+ LC  G
Sbjct: 396 VLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRG 455

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             Q+A  L+K M + G   + +TY TL+  F KN    E  E+ D M L GVS ++ TYN
Sbjct: 456 KLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYN 515

Query: 643 AIISPLLGEKSAED 656
            +I  L   +  E+
Sbjct: 516 TLIDGLCKSERVEE 529



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 198/451 (43%), Gaps = 56/451 (12%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ LV   ++ G  + A +V+  +  +G    I+ +N+ +S L KL E+    K+  +M
Sbjct: 303 TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEA-------------------------------- 235
           +      N  T+N +I  LCKE ++EEA                                
Sbjct: 363 IERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNH 422

Query: 236 ---LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
              + LY  M   G  P+   +NM+I+  C  G L+ AL L ++M V SG     N +T+
Sbjct: 423 TVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEV-SG--CARNVITY 479

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +I+GFCK  R+  AEEI   M   G+  N  TY TLIDG  +    EEA +L D+M+ 
Sbjct: 480 NTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM 539

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            GL P+   YNS + +    GD++ A  ++  M      PD  TY  L  GLC+ G V+ 
Sbjct: 540 EGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEA 599

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A KL   +  + +    ++YN +I  L +      A +L   MI +   PD +TY  +  
Sbjct: 600 ATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFR 659

Query: 473 GYCKGGNIEG-AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           G C+GG   G AV     M +    P    +  +  GL          SL      I L+
Sbjct: 660 GLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLF---------SLAMVGTLIKLI 710

Query: 532 DAITYN--------TLINGYFINGKIAEAFA 554
           D +           T+I G+    K  +A A
Sbjct: 711 DMVMEKAKFSDNEVTMIRGFLKISKYQDALA 741


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 279/585 (47%), Gaps = 87/585 (14%)

Query: 145 TPAVF--DALVRA-CTQIGATEGAYDVIQKLKVKGHSVS--IHAWNNFLSHLVKLNEIGR 199
           TP VF  +AL++  C +  + E    +I      G++ S  + ++N  +    K  E+ +
Sbjct: 159 TPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDK 218

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + L+ EM+  G   +V T+N +I  LCK   +++A+++   M   G+ P+   +N++I 
Sbjct: 219 AYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIR 278

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C +G LE A++L +KM   SG  + P+ VT++ +I  +CK+GR   A  +  +M++ G
Sbjct: 279 GYCSLGQLEEAVRLLKKM---SGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335

Query: 320 IDCNVRTYATLIDGYA-----------------------------------RGGSSEEAL 344
              N   Y  L+ GYA                                   + G+ ++A+
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 395

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
               EM + GL P+ V Y++ IH L   G VE A++  + M+ + + P+  +++ L  GL
Sbjct: 396 TAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 455

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C  G  K+  +L  +++   +  DA   N +++ LCK   +  A+     +I  G+ PD+
Sbjct: 456 CSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDV 515

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA------ 518
           ++Y TLIDGYC  G ++ +++  + M  +  +P+   YNS++NG  K+  ++ A      
Sbjct: 516 VSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYRE 575

Query: 519 -----------------KSLLQASQ-------------RIGLLDAITYNTLINGYFINGK 548
                              L QA +             R   L   TYNT++ G   N  
Sbjct: 576 MFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSC 635

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA  MF ++R+    ++   ++I+IN L K G   +A+ L   M+L G +PD +TY+ 
Sbjct: 636 VDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSL 695

Query: 609 LVTRFSKNCSPEEVIELHDDMVLS----GVSPDNQTYNAIISPLL 649
           ++    K+   E ++E  D++ LS    G + D+   N I+  LL
Sbjct: 696 MI----KSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLL 736



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 242/521 (46%), Gaps = 77/521 (14%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW---PNVVCFNMIIN 259
           +++ M   GY  +V ++N +I  LC E K +EAL L   M   G +   PNVV +N +I+
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              + G+++ A  LF +   M G  + P+ VT+N +I+G CK   ++ A  I   M   G
Sbjct: 209 GFFKEGEVDKAYFLFHE---MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY----------------- 362
           +  + RTY  +I GY   G  EEA+RL  +M   GL P+ V Y                 
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325

Query: 363 -------------NSTIHWLFAEG-DVEGALFVLSDMID--------------------- 387
                        NSTI+ +   G   +GAL  + D++D                     
Sbjct: 326 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 385

Query: 388 -KH-----------------ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
            KH                 + PD  +YS +   LC+ G V+ A    NQ++ E +  + 
Sbjct: 386 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNI 445

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            S+  LI+ LC        ++L   MI RG+ PD I   T++D  CK G +  A   ++ 
Sbjct: 446 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM 505

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           +  +  KP++V YN++I+G C    +D +   L     IGL  D+ TYN+L+NGYF NG+
Sbjct: 506 VIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGR 565

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +A A++ EM    +    +  NI+++ L + G    AREL   M+  G      TY T
Sbjct: 566 VEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNT 625

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++    +N   +E + + +D+       D +T++ +I+ LL
Sbjct: 626 VLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALL 666



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 226/461 (49%), Gaps = 15/461 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEE-------ALSLYYRMLKSGIWPNVVCFN 255
           L+ E++      +V+ FN V+  + +             A+SL+  M++SG+        
Sbjct: 36  LFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAIIG 95

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY-A 314
           ++I   C VG L+ A   F    + +G  V   +VT N +I G C   R + A ++ +  
Sbjct: 96  ILIRCFCTVGRLDLAFAAFALF-LKTGWRV--QNVTLNQLIKGLCDGNRTDDAMDMVFRR 152

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG---LMPNNVVYNSTIHWLFA 371
           M + G   +V +Y  LI G      S+EAL L   M   G     PN V YN+ I   F 
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           EG+V+ A F+  +M+ + + PD  TY+ L  GLC+   + +A  +   + ++ ++ D  +
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YNI+I   C    L  A +LL  M   GL PD++TY  LI  YCK G    A  V+++M 
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           +  +KPN  IY+ +++G     +L   + LL    R G+  +   +N LI  Y  +G + 
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVD 392

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A   F+EMR  G+  + V Y+ +I+ LCK G  + A      M+  G+ P+ +++T+L+
Sbjct: 393 KAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLI 452

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
                    ++V EL  +M+  G+ PD    N I+  L  E
Sbjct: 453 HGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 493



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 230/446 (51%), Gaps = 3/446 (0%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYR-MLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           V+NV T N +I  LC   + ++A+ + +R M + G  P+V  +N +I   C     + AL
Sbjct: 124 VQNV-TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 182

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L   M    G +  PN V++N +I+GF K G V+ A  + + M+  G+  +V TY +LI
Sbjct: 183 ELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLI 242

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           DG  +  + ++A+ +   M  +G+MP+   YN  I    + G +E A+ +L  M    + 
Sbjct: 243 DGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 302

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  TYS+L +  C+ G   +A  + + ++ +    ++  Y+IL++       L   + L
Sbjct: 303 PDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 362

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  MI  G+  +   +  LI  Y K G ++ A+  +  M++   +P++V Y+++I+ LCK
Sbjct: 363 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 422

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              ++ A          GL  + I++ +LI+G    G+  +   +  EM N GI  + + 
Sbjct: 423 TGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 482

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
            N +++ LCK G   +A++   ++I  G+ PD V+Y TL+  +      +E I+  D MV
Sbjct: 483 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMV 542

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G+ PD+ TYN++++        ED
Sbjct: 543 SIGLRPDSWTYNSLLNGYFKNGRVED 568



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 219/441 (49%), Gaps = 4/441 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L++   +IG    A  V   +  KG   +   ++  L        +     L   M
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G       FN++I A  K   +++A++ +  M ++G+ P+VV ++ +I+  C+ G +
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A+  F +M     + + PN ++   +I+G C +G  +  EE+ + MI  GI  +    
Sbjct: 427 EDAVYHFNQM---VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 483

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T++D   + G   EA    D ++  G+ P+ V YN+ I      G ++ ++  L  M+ 
Sbjct: 484 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS 543

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD +TY+ L  G  +NG V+ A  L+ ++  + +   A + NI+++ L ++  + A
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA 603

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A++L   M+ RG    I TY T++ G C+   ++ A++++E+++  E + ++  ++ +IN
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVIN 663

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L K   +D AKSL  A    G + D ITY+ +I  +   G + E+  +F  M   G A 
Sbjct: 664 ALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAA 723

Query: 567 NKVGYNILINFLCKFGCYQQA 587
           +    NI++  L + G  ++A
Sbjct: 724 DSHMLNIIVRRLLEKGDVRRA 744



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 202/435 (46%), Gaps = 61/435 (14%)

Query: 142 CKATPAVFDALVRACTQIG-----------ATEGAY----DVIQKLKVKGHSVSIHAWNN 186
           C    +VFD++VR   +             AT+GA     D++  +   G      A+N 
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K   + +    + EM   G   +V +++ VI+ LCK  ++E+A+  + +M+  G
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440

Query: 247 IWPNVVCFNMIINEACQVGDL----EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           + PN++ F  +I+  C +G+     E A ++  +        + P+++  N I++  CK 
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR-------GIHPDAIFMNTIMDNLCKE 493

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GRV  A++    +I  G+  +V +Y TLIDGY   G  +E+++  D MV  GL P++  Y
Sbjct: 494 GRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTY 553

Query: 363 NSTIHWLFAEGDVEGALFVLSDM-----------------------------------ID 387
           NS ++  F  G VE AL +  +M                                   +D
Sbjct: 554 NSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVD 613

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +       TY+ +  GLC N CV +A ++   +  +    D  +++I+IN L K   +  
Sbjct: 614 RGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDE 673

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L S+M++RG +PD+ITY  +I  + + G +E +  ++ +M+K     +  + N I+ 
Sbjct: 674 AKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVR 733

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 734 RLLEKGDVRRAGTYL 748



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 190/442 (42%), Gaps = 58/442 (13%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD-------LEFALKLFRKMGVMSGDSV 285
           E+AL+L+  +L      +V  FN ++    +             A+ LF  M V SG ++
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTM-VRSGVNM 89

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +   +    +I  FC +GR++ A       +K G      T   LI G   G  +++A+ 
Sbjct: 90  MAAII--GILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMD 147

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           +                                  V   M +    PD F+Y+ L KGLC
Sbjct: 148 M----------------------------------VFRRMPELGYTPDVFSYNALIKGLC 173

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDA--------YSYNILINYLCKSNNLAAAKQLLSSMIV 457
                ++A +L       HM  D          SYN +I+   K   +  A  L   M+ 
Sbjct: 174 VEKKSQEALELLI-----HMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMG 228

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           +GL PD++TY +LIDG CK   ++ AV + ++M      P+   YN +I G C    L+ 
Sbjct: 229 QGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEE 288

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  LL+     GL  D +TY+ LI  Y   G+ AEA ++F  M   G   N   Y+IL++
Sbjct: 289 AVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLH 348

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
                G     R+L+ +MI  GI  ++  +  L+  ++K+ + ++ +    +M  +G+ P
Sbjct: 349 GYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRP 408

Query: 637 DNQTYNAIISPLLGEKSAEDQV 658
           D  +Y+ +I  L      ED V
Sbjct: 409 DVVSYSTVIHILCKTGRVEDAV 430



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/342 (21%), Positives = 152/342 (44%), Gaps = 38/342 (11%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  ++    + G  E A     ++  +G S +I ++ + +  L  + E  +  +L  EM+
Sbjct: 413 YSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI 472

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   +    N ++  LCKE ++ EA   +  ++  G+ P+VV +N +I+  C VG ++
Sbjct: 473 NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMD 532

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE---------------------- 306
            ++K   +M  +    + P+S T+N ++NG+ K GRVE                      
Sbjct: 533 ESIKQLDRMVSIG---LRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSN 589

Query: 307 -------------FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
                         A E+   M+  G    + TY T++ G       +EALR+ +++  +
Sbjct: 590 IMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSK 649

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
               +   ++  I+ L   G ++ A  + S M+ +   PD  TYS++ K     G ++++
Sbjct: 650 EFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEES 709

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
             L   + +     D++  NI++  L +  ++  A   L+ +
Sbjct: 710 DNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKI 751


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 224/445 (50%), Gaps = 5/445 (1%)

Query: 202  KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +L+ EM   G + +  T+ ++I  LCK  K   A+ L+ +M K     +V  + MII+  
Sbjct: 1037 QLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDAL 1095

Query: 262  CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            C+ G    AL +F +M    G  +LP+ V ++ +++G C+ GR++ A E    M   GI 
Sbjct: 1096 CKDGMTTEALDMFSEM---IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152

Query: 322  CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             +V TY +LI G +R G  +E     + MV RG  P+   +   I  L  EG V  A  +
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212

Query: 382  LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            L  M  K   PD  TY+ L  GLC  G ++ A KL   + +  +  + +SYNILIN  CK
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272

Query: 442  SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
               +  A +    M  +GL P  +TY TLI   C+ G +  A +++  M+   +   L  
Sbjct: 1273 DQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 1332

Query: 502  YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
            Y  +++GLCK+  L+ A  L Q+ ++      I  ++ L++G    GK+ EA+  F E+ 
Sbjct: 1333 YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 1392

Query: 561  NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
              G+  + + YNILIN LC  G   +A +L+  M   G +PD +T+  ++    K     
Sbjct: 1393 KNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIH 1452

Query: 621  EVIELHDDMVLSGVSPDNQTYNAII 645
            E I+L ++M     SPD    + ++
Sbjct: 1453 EAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 222/450 (49%), Gaps = 7/450 (1%)

Query: 211  GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
            G+  +  T   ++  +  E  + +A+ L+  M K G+  +   + ++IN  C+      A
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA 1070

Query: 271  LKLFRKM-GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
            +KL  KM G   GD       T+  II+  CK G    A ++   MI AGI  +V  Y++
Sbjct: 1071 IKLHEKMKGNCKGDVF-----TYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125

Query: 330  LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
            L+DG  R G  +EAL    EM  RG+  +   YNS IH L   G  +   + L+ M+D+ 
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185

Query: 390  ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
              PD FT++IL  GLC+ G V +A ++   +  +    D  +YN L+N LC    L  A 
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDAT 1245

Query: 450  QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            +L  S+  RG+  ++ +Y  LI+GYCK   I+ A + +E M+    KP+ V YN++I  L
Sbjct: 1246 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305

Query: 510  CKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            C+   +  A+ L    Q  G  L   TY  L++G   NG + EA  +F  ++      N 
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNI 1365

Query: 569  VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
              ++IL++ +C+ G  ++A +    +  +G+ PD + Y  L+          E ++L   
Sbjct: 1366 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 1425

Query: 629  MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            M   G  PD+ T+N II  LL E    + +
Sbjct: 1426 MEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 239/494 (48%), Gaps = 43/494 (8%)

Query: 191  LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
            ++KLN+     KL+   +    +   +TFN ++ ++ K         +Y ++   GI P+
Sbjct: 924  IIKLNDA---IKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPD 980

Query: 251  VVCFNMIINEACQV-----------------------------------GDLEFALKLFR 275
            +   N++I+  C +                                     +  A++LF 
Sbjct: 981  LYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFD 1040

Query: 276  KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            +   M+   +L ++ T+  +ING CK  +   A ++   M K     +V TY  +ID   
Sbjct: 1041 E---MTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALC 1096

Query: 336  RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
            + G + EAL +  EM+  G++P+ VVY+S +  L   G ++ AL    +M  + I  D +
Sbjct: 1097 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVY 1156

Query: 396  TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            TY+ L  GL R G  K+     N +++     DA+++ ILI+ LCK   +  A+Q+L  M
Sbjct: 1157 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 1216

Query: 456  IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              +G  PDI+TY TL++G C  G +E A +++E++     K N+  YN +ING CKD  +
Sbjct: 1217 RHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 1276

Query: 516  DAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
            D A    +  +  GL  + +TYNTLI     +G++  A  +F EM+  G  +    Y +L
Sbjct: 1277 DEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 1336

Query: 575  INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            ++ LCK G  ++A +L + +      P+   ++ L+    +    EE  +  D++  +G+
Sbjct: 1337 LDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396

Query: 635  SPDNQTYNAIISPL 648
             PD   YN +I+ L
Sbjct: 1397 EPDTIAYNILINGL 1410



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 187/388 (48%), Gaps = 15/388 (3%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            CK     +  ++ A  + G T  A D+  ++   G    +  +++ +  L +   +    
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 202  KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            + +KEM   G   +V T+N +I+ L +    +E       M+  G  P+   F ++I+  
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 262  CQ---VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
            C+   VG+ +  L+L R  G        P+ +T+N ++NG C +G++E A ++  ++   
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKE------PDILTYNTLMNGLCLVGQLEDATKLFESLADR 1254

Query: 319  GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            GI  NV +Y  LI+GY +    +EA R  +EM  +GL P+ V YN+ I  L   G V  A
Sbjct: 1255 GIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 1314

Query: 379  LFVLSDMIDKHICPDHF---TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
              +  +M     C       TY +L  GLC+NG +++A  L   + +     +   ++IL
Sbjct: 1315 QKLFVEM---QTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSIL 1371

Query: 436  INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
            ++ +C++  L  A +    +   GL PD I Y  LI+G C  G +  AV++   M++   
Sbjct: 1372 LDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGC 1431

Query: 496  KPNLVIYNSIINGLCKDASLDAAKSLLQ 523
             P+ + +N II  L K+  +  A  LL+
Sbjct: 1432 LPDSITFNVIIQNLLKENEIHEAIQLLE 1459



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 177/362 (48%), Gaps = 9/362 (2%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK---LNEIGRFWKLY 204
            V+ +L+    + G  + A +  ++++ +G S  ++ +N+ +  L +     E+  F  L 
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL- 1180

Query: 205  KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
              MV  G+  +  TF ++I  LCKE K+ EA  +   M   G  P+++ +N ++N  C V
Sbjct: 1181 --MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLV 1238

Query: 265  GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
            G LE A KLF  +   +   +  N  ++N +ING+CK  +++ A      M   G+  + 
Sbjct: 1239 GQLEDATKLFESL---ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPST 1295

Query: 325  RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             TY TLI    + G    A +L  EM   G       Y   +  L   G +E A+ +   
Sbjct: 1296 VTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQS 1355

Query: 385  MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            +      P+   +SIL  G+CR G +++A+K  +++ +  +  D  +YNILIN LC    
Sbjct: 1356 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415

Query: 445  LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
            L+ A +LL  M  +G +PD IT+  +I    K   I  A+Q+ E M+     P+  + + 
Sbjct: 1416 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 1475

Query: 505  II 506
            ++
Sbjct: 1476 LL 1477



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 169/390 (43%), Gaps = 45/390 (11%)

Query: 300  CKLGRVEFAEEIRY---AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            C+ G ++  + I+    ++    + C   T+  L+   A+ G       +  ++   G+ 
Sbjct: 920  CRFGIIKLNDAIKLFDRSLCSEPMPC-TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQ 978

Query: 357  PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            P+    N  IH   +   V     V    + +   PD  T + L KG+     +  A +L
Sbjct: 979  PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQL 1038

Query: 417  HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI--VRGLIPDIITYGTLIDGY 474
             +++ ++ ++GDA +Y ILIN LCK+     A +L   M    +G   D+ TYG +ID  
Sbjct: 1039 FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKG---DVFTYGMIIDAL 1095

Query: 475  CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA---------------- 518
            CK G    A+ ++  M      P++V+Y+S+++GLC+   L  A                
Sbjct: 1096 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 1155

Query: 519  ---KSLLQASQRIGLL-----------------DAITYNTLINGYFINGKIAEAFAMFSE 558
                SL+    R GL                  DA T+  LI+G    GK+ EA  +   
Sbjct: 1156 YTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 1215

Query: 559  MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
            MR+ G   + + YN L+N LC  G  + A +L + +   GI  +  +Y  L+  + K+  
Sbjct: 1216 MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275

Query: 619  PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +E     ++M   G+ P   TYN +I  L
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 125/271 (46%), Gaps = 4/271 (1%)

Query: 385  MIDKHICPDHF----TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
            + D+ +C +      T++ L   + + G     F ++ ++ +  +  D Y+ NILI+  C
Sbjct: 933  LFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCC 992

Query: 441  KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
                +     +    + RG  PD +T  TL+ G      I  AVQ+++ M K     +  
Sbjct: 993  SLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAK 1052

Query: 501  IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
             Y  +INGLCK      A  L +  +     D  TY  +I+    +G   EA  MFSEM 
Sbjct: 1053 TYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMI 1112

Query: 561  NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
              GI  + V Y+ L++ LC+FG  ++A E  K M   GI  D  TY +L+   S+    +
Sbjct: 1113 GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWK 1172

Query: 621  EVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            EV    + MV  G SPD  T+  +I  L  E
Sbjct: 1173 EVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/584 (28%), Positives = 269/584 (46%), Gaps = 57/584 (9%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
           C +V      ++FDD + LM      N +  L F+            T A    LV    
Sbjct: 292 CTLVLGFCRVQQFDDGICLM------NEMVELGFV-----------PTEAAVSGLVDGLR 334

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           + G  + AYD++ KL   G   ++  +N  ++ L K  ++ +   LYK M S     N  
Sbjct: 335 KKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDV 394

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T++++I + CK   L+ A S + RM++ GI   +  +N +IN  C+ GDL  A  L+ KM
Sbjct: 395 TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKM 454

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                + + P + T   +I+G+CK  +VE A ++   M +  I  +V T+  LI G    
Sbjct: 455 ---INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCST 511

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
               EA +L DEMV+R + P  V YN  I       +++ A  +L DM+   + PD +TY
Sbjct: 512 NEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTY 571

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA--------- 448
             L  GLC  G V  A    + + ++++  +   Y+ L++  C    L  A         
Sbjct: 572 RPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQ 631

Query: 449 ------------------KQ--------LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
                             KQ        LL  M  +GL PD + Y ++ID Y K G+ + 
Sbjct: 632 RGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKK 691

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           + +  + M   +  PN+V Y + +NGLCK   +D A  L +      +  +++TY   ++
Sbjct: 692 SGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLD 751

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
                G + EA  +  EM   G+  N   YNILI   CK G   +A +++  M  +GI P
Sbjct: 752 SLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           D +TY+T++    ++      +EL D M+  GV PD+  +N +I
Sbjct: 811 DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLI 854



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 187/710 (26%), Positives = 325/710 (45%), Gaps = 76/710 (10%)

Query: 12  SNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSL----VNRVV 67
           S SPL R F   K      T  I   +  V      WKI     PS++++L    V +V+
Sbjct: 12  SLSPLQRTFSTSKSTNENDTHFITHISDIVR-GNLSWKIAFN-DPSISSTLKPHHVEQVL 69

Query: 68  SEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS 127
                  KLAL F+ ++G +   +H+  S   +VH LV  + F  A  L+  L+   S  
Sbjct: 70  INTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGS-D 128

Query: 128 PLEFLEGLLDSYEICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           P    E  L+S++ CK +  + FD LV +  Q      A  V++ +        +   + 
Sbjct: 129 PKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSA 188

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCG-----------------------------YVEN-- 215
            L+ L+++ +    W+++ E V+ G                             ++E+  
Sbjct: 189 ILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNR 248

Query: 216 ----VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
               + T+N++I+ LCK   + EAL +   + + G+  +VV +  ++   C+V   +  +
Sbjct: 249 FDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGI 308

Query: 272 KLFRKM-------------GVMSG-------DSV------------LPNSVTHNCIINGF 299
            L  +M             G++ G       DS             LPN   +N +IN  
Sbjct: 309 CLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINAL 368

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK   ++ AE +   M    +  N  TY+ LID + + G  + A      M++ G+    
Sbjct: 369 CKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETI 428

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS I+     GD+  A F+ + MI++ + P   T++ L  G C++  V++AFKL+ +
Sbjct: 429 YPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYRE 488

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+ +    Y++  LI  LC +N +A A +L   M+ R + P  +TY  +I+GYCK  N
Sbjct: 489 MNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHN 548

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A ++ E+M      P+   Y  +I+GLC    + AAK  +    +  L L+ + Y+ 
Sbjct: 549 MDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSA 608

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++GY   G++ EA +   EM   GI ++ V + +LI+   K    ++   L+K M   G
Sbjct: 609 LLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG 668

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + PD V YT+++  +SK  S ++  E  D MV     P+  TY A ++ L
Sbjct: 669 LRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGL 718



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 249/514 (48%), Gaps = 9/514 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    + G    A +V + L+ KG    +  +   +    ++ +      L  EM
Sbjct: 255 TYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEM 314

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+V      + ++  L K+  ++ A  L  ++ + G  PN+  +N +IN  C+  DL
Sbjct: 315 VELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDL 374

Query: 268 EFALKLFRKMGVMSGDSVLP-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           + A  L++ M  M+    LP N VT++ +I+ FCK G ++ AE     MI+ GI   +  
Sbjct: 375 DKAELLYKNMHSMN----LPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP 430

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LI+G+ + G    A  L  +M+  GL P    + + I     +  VE A  +  +M 
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMN 490

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K I P  +T++ L  GLC    + +A KL ++++E  +     +YN++I   CK++N+ 
Sbjct: 491 EKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMD 550

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +LL  M+  GL+PD  TY  LI G C  G +  A    +++ K   K N + Y++++
Sbjct: 551 KAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALL 610

Query: 507 NGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G C    L +A  +  +  QR   +D + +  LI+G      +   F +  +M + G+ 
Sbjct: 611 HGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLR 670

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + V Y  +I+   K G ++++ E + +M+     P+ VTYT  +    K    +    L
Sbjct: 671 PDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHL 730

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGE---KSAED 656
            + M+ + +SP++ TY   +  L  E   K A D
Sbjct: 731 FEKMLTANISPNSVTYGCFLDSLTKEGNMKEATD 764



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 246/538 (45%), Gaps = 20/538 (3%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A+++ L      D A LL  N+ S N   PL                   +  L+ +  +
Sbjct: 363 ALINALCKGEDLDKAELLYKNMHSMNL--PL---------------NDVTYSILIDSFCK 405

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  + A     ++   G   +I+ +N+ ++   K  ++     LY +M++ G      T
Sbjct: 406 RGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATT 465

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F  +I   CK+ ++E+A  LY  M +  I P+V  F  +I   C   ++  A KLF +M 
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEM- 524

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 + P  VT+N +I G+CK   ++ A E+   M+  G+  +  TY  LI G    G
Sbjct: 525 --VERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTG 582

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
               A    D++ K+ L  N + Y++ +H    +G +  AL    +MI + I  D   ++
Sbjct: 583 RVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHA 642

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           +L  G  +   +K+ F L  ++ ++ +  D+  Y  +I+   K  +   + + L  M+  
Sbjct: 643 VLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTE 702

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
              P+++TY   ++G CK G I+ A  ++E M      PN V Y   ++ L K+ ++  A
Sbjct: 703 KCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEA 762

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             L     +  L +  TYN LI G+   G++ EA  + SEM   GI  + + Y+ +I   
Sbjct: 763 TDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEH 822

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           C+ G    A EL   M+  G+ PD V +  L+     N + ++  EL +DM+  G+ P
Sbjct: 823 CRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 208/431 (48%), Gaps = 5/431 (1%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  + T   F  L+    +    E A+ + +++  K  + S++ +   +  L   NE+  
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             KL+ EMV         T+N++I   CK   +++A  L   ML +G+ P+   +  +I+
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C  G +  A      +      ++  N + ++ +++G+C  GR+  A      MI+ G
Sbjct: 577 GLCSTGRVSAAKDFIDDL---HKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I+ ++  +A LIDG  +    +    L  +M  +GL P++V+Y S I     EG  + + 
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
             L  M+ +   P+  TY+    GLC+ G + +A  L  ++L  ++  ++ +Y   ++ L
Sbjct: 694 ECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSL 753

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K  N+  A  L   M+ +GL+ +  TY  LI G+CK G +  A +V   M +    P+ 
Sbjct: 754 TKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDC 812

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           + Y++II   C+   + AA  L     R G+  D++ +N LI G  +NG + +AF + ++
Sbjct: 813 ITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRND 872

Query: 559 MRNVGIAVNKV 569
           M + G+   ++
Sbjct: 873 MLSRGLKPRQI 883



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 31/448 (6%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T   ++ ++    +    + A+++++ +   G     + +   +S L     +     
Sbjct: 530 KPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKD 589

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
              ++       N   ++ +++  C + +L EALS    M++ GI  ++VC  ++I+ A 
Sbjct: 590 FIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAM 649

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +  D++   +LF  +  M    + P+SV +  +I+ + K G  + + E    M+      
Sbjct: 650 KQQDMK---RLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFP 706

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY   ++G  + G  + A  L ++M+   + PN+V Y   +  L  EG+++ A  + 
Sbjct: 707 NVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLH 766

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ K +  +  TY+IL +G C+ G + +A K+ +++ E  +  D  +Y+ +I   C+S
Sbjct: 767 HEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRS 825

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++ AA +L  +M+ +G+ PD + +  LI G C  G ++ A ++  +M     KP     
Sbjct: 826 GDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP----- 880

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
                           + +LQ  +R    D    N L++G  + G++  A  ++  M   
Sbjct: 881 ----------------RQILQLQKR----DLGVCNFLMHGGCVTGEVDTALRLYHSMLTR 920

Query: 563 GIAVNKVGYNILINFLCKFGCYQQAREL 590
            + ++   +  L  +L  +G   ++ EL
Sbjct: 921 AVKLSLEMWKCL--YLLSYGVISKSEEL 946


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 261/529 (49%), Gaps = 28/529 (5%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV- 148
           FSH  + +  I   L ++   DDA+ L  +L++   + PL                P+V 
Sbjct: 48  FSHCPKQNAKI---LSSFNGIDDAVTLFNHLIN---MQPL----------------PSVI 85

Query: 149 -FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ ++ +  ++     A  +++++  KG + SI   + +++    L E+G  + +   +
Sbjct: 86  QFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIV 145

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  GY  N  T   V+  LC   ++++A+  +  +   G+  + VC+  +IN  C++G  
Sbjct: 146 LKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRS 205

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +L ++M    G  V PN V +N II+ FCK      A ++   ++  GID ++ TY
Sbjct: 206 IDAFQLLQEM---EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI G+ R G   E  +L  EMV + + PN   +N  I     +G +  A  + + M+ 
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +   PD  T++ L  G C +G V +A KL + V E  ++ D +SY ILI   CK   +  
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L + M  + ++ DI+ Y +LIDG CK G I  A +++  +      PN++ YN +I+
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             CK   +D    L +     GL   + TYN LINGY  + +I EA  + S M++  +A 
Sbjct: 443 AFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAP 502

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           + + YN L + LCK G    A EL KVM + G   D  TY  L+  F K
Sbjct: 503 DSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 245/486 (50%), Gaps = 12/486 (2%)

Query: 180 SIHAWNNFLSH--------LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           + H +  F SH        L   N I     L+  +++   + +V  FN +I ++ K   
Sbjct: 40  AFHKFLRFFSHCPKQNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKH 99

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
              A+SL  +M+  G+ P++   ++ IN  C +G++ FA   F  +G++      PN++T
Sbjct: 100 CPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFA---FSVLGIVLKRGYQPNNIT 156

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              ++ G C  G V+ A +    +   G+  +   Y TLI+G  + G S +A +L  EM 
Sbjct: 157 LTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEME 216

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            + + PN V+YN  I     +     A  +   ++D  I PD  TY+ L +G CR G   
Sbjct: 217 GQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWG 276

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +  +L  +++ +++  + Y++N+LI+  C+   +  A+ + + M+ RG  PDI+T+ TLI
Sbjct: 277 EVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLI 336

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ-RIGL 530
            G+C  GN+  A ++++ + +    P++  Y  +I G CK   +D A SL    + +  +
Sbjct: 337 SGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV 396

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           LD + Y++LI+G   +G+I+ A+ +FS + N G   N + YNILI+  CK        EL
Sbjct: 397 LDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIEL 456

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            K+M   G+ P  +TY  L+  + K+    E + L   M    ++PD+ TYN++   L  
Sbjct: 457 FKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCK 516

Query: 651 EKSAED 656
                D
Sbjct: 517 SGRISD 522



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 177/359 (49%), Gaps = 8/359 (2%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           S ++   L+ +EG     ++ K    +++ ++ +  +   T  A D+  K+   G    I
Sbjct: 205 SIDAFQLLQEMEG-----QVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDI 259

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             + + +    +  + G   +L  EMV+     NV TFN++I A C++ K+ EA  ++  
Sbjct: 260 LTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M+K G  P++V FN +I+  C  G++  A KLF     +    +LP+  ++  +I G+CK
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLF---DTVFERGILPDVWSYTILIIGYCK 376

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
             R++ A  +   M    +  ++  Y++LIDG  + G    A  L   +   G  PN + 
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 436

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  I       D++  + +   M  K + P   TY+IL  G C++  +++A  L + + 
Sbjct: 437 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 496

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            +++  D+ +YN L + LCKS  ++ A +L   M V G   D+ TY  L+D +CK  ++
Sbjct: 497 SKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555


>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 846

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 295/588 (50%), Gaps = 24/588 (4%)

Query: 9   LYKSNS-PLSRAFH-VGKQFANPSTEDIVFRAICVNLRQRKWKI------LEQMAPSLTN 60
           L+ S+S P+S  F+ +     NP+    +   I   L+Q+ + +       + + P L  
Sbjct: 48  LHDSDSNPISSPFYNLLPPTHNPNN---IVNLISTALKQKSFHLSHFQTQFKTILPHLGA 104

Query: 61  SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR-FDDALLLMGN 119
             ++RV+   +     AL F+ WV  + RF+ SL++ C IVH+L  W + FD A+ L+  
Sbjct: 105 HEISRVLIRTQSDASSALTFFNWVKNDLRFTLSLQNYCLIVHIL-GWNQIFDQAMKLLCE 163

Query: 120 LMSANSVSPLEF---LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           L+  N+V+ + +    + L+D  E C   P +FD L++A  ++G  E   +   K  V+G
Sbjct: 164 LIQLNNVNVVSYDDVYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWK-NVEG 222

Query: 177 HSV-SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
             V ++ A N  L+ L K+N IG  W++Y+EM   G   N  TFN++ + LC+E   ++ 
Sbjct: 223 SFVPNVVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKV 282

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
                +M + G  P++V +N++IN  C+   LE A  L++ MG+     V+PN ++++ +
Sbjct: 283 NGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGI---RGVVPNLISYSAL 339

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR-LCDEMVKRG 354
           +NG CK G+++ A ++   M++ GID +V +Y TLI GY + G   +  R L  EM+  G
Sbjct: 340 MNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIG 399

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P+NV           EG +  AL +++++    I      Y  L   LC+ G    A 
Sbjct: 400 IRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAAR 459

Query: 415 KLHNQVLEE-HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
               ++ ++   V +  +Y  L   LC  NN+  A  L S M  + +  ++ TY  +I  
Sbjct: 460 SFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISC 519

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLD 532
            C+      A  + E M  +   P+L I  ++ING C++  +D A SLL+  ++   + D
Sbjct: 520 LCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYD 579

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
             +YN ++  +   G +AE   +  ++  +G   N +    +I  L K
Sbjct: 580 TESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGLQK 627



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 198/437 (45%), Gaps = 41/437 (9%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N V F+M+I    ++G +E  L+ F K   + G S +PN V  NC++NG  K+  +    
Sbjct: 192 NPVIFDMLIKAYVKLGMVEKGLETFWKN--VEG-SFVPNVVACNCLLNGLSKINYIGECW 248

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E+   M + GI  N  T+  +     R G S++     ++M + G  P+ V YN  I+  
Sbjct: 249 EVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGY 308

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +  +E A ++   M  + + P+  +YS L  GLC+ G +K+A +L NQ+++  +  D 
Sbjct: 309 CKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDV 368

Query: 430 YSYNILINYLCKSN-NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
            SYN LI+  CK    +   + LL  MI  G+ PD +T   +  GY + G +  A+ +  
Sbjct: 369 VSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVA 428

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG--LLDAITYNTLINGYFIN 546
            +++   K    +Y+ ++  LCK+    AA+S L    + G  + +  TY  L       
Sbjct: 429 ELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSF 488

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV-- 604
             + EA  + SEM    + +N   Y  +I+ LC+     +A  L++ M+  GI+PD    
Sbjct: 489 NNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIK 548

Query: 605 ---------------------------------TYTTLVTRFSKNCSPEEVIELHDDMVL 631
                                            +Y  +V  F +  +  E++EL D +V 
Sbjct: 549 RALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVK 608

Query: 632 SGVSPDNQTYNAIISPL 648
            G  P++ T   +I  L
Sbjct: 609 IGYVPNSLTCKYVIRGL 625


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 262/585 (44%), Gaps = 40/585 (6%)

Query: 2   FSAFCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNS 61
           F +    L  + +P S        +  P++       I   + ++ W  L+ +      S
Sbjct: 18  FPSLDPKLNNTKTPFSSP---NSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPS 74

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
            + + +      P L L ++ W  +     H++E  C ++HLL N + ++    L+ +  
Sbjct: 75  SLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFA 134

Query: 122 SANSVSPLEFLEGL--LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
                S       L  L S+    A   + D LV A  + G  + A +   +    G  +
Sbjct: 135 KNAHYSNSTIFHSLSVLGSWGC--ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRL 192

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S  + N  L  LVK   IG    +YKEM+      NV TF++VI  LCK  K ++A  + 
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV 252

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV-------------------- 279
             M   G  P+V+ +N II+  C+ G +  A  L ++M                      
Sbjct: 253 EDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRD 312

Query: 280 ------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                       M    + PN VT+N +ING C  G+++ A  ++  M   G+  NV TY
Sbjct: 313 ENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTY 372

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI+G+ +    +EA  + D++ KRGL PN + +N+ I      G ++ A  + S M+D
Sbjct: 373 NALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLD 432

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +CP+  TY+ L  G CR G VK+A KL  ++    +  D  +YNIL++ LCK      
Sbjct: 433 TGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK 492

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL  M   GL P  +TY  LIDGY + GN   A+ V   M+K  ++ N+V YN +I 
Sbjct: 493 AVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIK 552

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
           G C    L+ A  LL      GL+ +  TY+ L +     G I +
Sbjct: 553 GFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 210/423 (49%), Gaps = 6/423 (1%)

Query: 237 SLYYRMLKSGIW--PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           ++++ +   G W   N +  +M++    + G+++ AL+ F + G         ++++ N 
Sbjct: 143 TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYG---FRLSALSCNP 199

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++    K GR+   E +   MI+  I  NV T+  +I+G  + G  ++A  + ++M   G
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+ + YN+ I      G +  A  +L +M+ K I P+  T++IL  G CR+  V  A 
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           K+  ++  + +  +  +YN LIN LC +  L  A  L   M   GL P+++TY  LI+G+
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
           CK   ++ A ++ +++ K    PN++ +N++I+   K   +D A  L       G+   +
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 535 -TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TYN LI G+   G + EA  +  EM   G+  + V YNIL++ LCK G  ++A  L+  
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M   G+ P ++TY  L+  + +  +    + +   M   G   +  TYN +I     +  
Sbjct: 500 MFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559

Query: 654 AED 656
            E+
Sbjct: 560 LEE 562


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 253/508 (49%), Gaps = 10/508 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G T  A  V++  +  G  V + A+N  ++   +    GR     + + S  
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRY---GRLDAARRLIASMP 132

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  LC   ++ +ALSL   ML+    P+VV + +++   C+      A+
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           K+  +M         PN VT+N IING C+  RV+ A +I   +   G   +  +Y T++
Sbjct: 193 KVLDEM---RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G       E+   L  EMV+   +PN V ++  + +    G VE A+ VL D + +H C
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVL-DRMSEHGC 308

Query: 392 PDHFTY-SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             + T  +I+   +C+ G V  AF+  N +       D  SY  ++  LC++     AK+
Sbjct: 309 TANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKE 368

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL+ M+ +   P+ +T+ T I   C+ G I+ A+ + E M +      +V YN+++NG C
Sbjct: 369 LLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFC 428

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               +D+A  L  +       + ITY TL+ G     ++  A  + +EM      +N V 
Sbjct: 429 VQGRVDSALELFNSLP--CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT 486

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N+L++F C+ G  ++A EL++ M+ HG  P+ +T+ TL+   +++C+ EE +EL   +V
Sbjct: 487 FNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLV 546

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             G+S D  TY++I+  L  E   E+ V
Sbjct: 547 SKGISLDTITYSSIVDVLSREDRIEEAV 574



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 240/475 (50%), Gaps = 7/475 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ +   +  L+ A  +      A  V+ +++ KG + +I  +N  ++ + + + +    
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++   + S G+  +  ++  V+  LC   + E+   L+  M+++   PN V F+M++   
Sbjct: 228 QILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFF 287

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A+++  +   MS      N+   N +IN  CK GRV+ A E    M   G  
Sbjct: 288 CRGGMVERAIEVLDR---MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCS 344

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  +Y T++ G  R G  E+A  L +EMV++   PN V +N+ I  L  +G ++ A+ +
Sbjct: 345 PDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILL 404

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M +        TY+ L  G C  G V  A +L N +  E    +  +Y  L+  LC 
Sbjct: 405 IEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEP---NTITYTTLLTGLCH 461

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  L AA +LL+ M+      +++T+  L+  +C+ G +E A+++ + M +    PNL+ 
Sbjct: 462 AERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLIT 521

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           +N++++G+ +D + + A  LL      G+ LD ITY+++++      +I EA  MF  ++
Sbjct: 522 FNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQ 581

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           ++G+    V YN +++ LCK     +A +    M+ +  +P+  TY  L+   ++
Sbjct: 582 DMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAR 636



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 141/316 (44%), Gaps = 4/316 (1%)

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA RL +    RG  P+  +    I  L   G    A  VL          D F Y+ L 
Sbjct: 53  EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G CR G +  A +L   +    +  DAY+Y  LI  LC    +  A  LL  M+ R   
Sbjct: 113 AGYCRYGRLDAARRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ 169

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P ++TY  L++  CK      A++V + M+     PN+V YN IING+C++  +D A+ +
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQI 229

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L      G   D ++Y T++ G     +  +   +F EM       N+V +++L+ F C+
Sbjct: 230 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCR 289

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G  ++A E++  M  HG   +      ++    K    ++  E  ++M   G SPD  +
Sbjct: 290 GGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTIS 349

Query: 641 YNAIISPLLGEKSAED 656
           Y  ++  L      ED
Sbjct: 350 YTTVLKGLCRAGRWED 365



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 205/450 (45%), Gaps = 24/450 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLL-----DSYEI--------- 141
           I++ +    R DDA  ++  L S     ++VS    L+GL      +  E+         
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN 272

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      FD LVR   + G  E A +V+ ++   G + +    N  ++ + K   +   +
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF 332

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +    M S G   +  ++  V+  LC+  + E+A  L   M++    PN V FN  I   
Sbjct: 333 EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICIL 392

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G ++ A+ L  +M    G SV    VT+N ++NGFC  GRV+ A E+  ++     +
Sbjct: 393 CQKGLIDQAILLIEQMPEY-GCSV--GIVTYNALVNGFCVQGRVDSALELFNSL---PCE 446

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TL+ G       + A  L  EM++     N V +N  + +   +G VE A+ +
Sbjct: 447 PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIEL 506

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M++    P+  T++ L  G+  +   ++A +L + ++ + +  D  +Y+ +++ L +
Sbjct: 507 VQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSR 566

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            + +  A Q+  ++   G+ P  + Y  ++   CK    + A+  + +M      PN   
Sbjct: 567 EDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNEST 626

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           Y  +I GL ++  L  A+ +L      G+L
Sbjct: 627 YVILIEGLAREGLLKEARYVLSELCSRGVL 656



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 2/221 (0%)

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +  L   ++LA A +L+     RG  PD+     LI   C+ G    A +V    +    
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
             ++  YN+++ G C+   LDAA+ L+ AS  +   DA TY  LI G    G++ +A ++
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLI-ASMPVP-PDAYTYTPLIRGLCDRGRVGDALSL 159

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             +M       + V Y +L+  +CK   + QA +++  M   G  P+ VTY  ++    +
Sbjct: 160 LDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCR 219

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               ++  ++ + +   G  PD  +Y  ++  L   K  ED
Sbjct: 220 EDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 260



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 106/222 (47%), Gaps = 3/222 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+         + A +++ ++      +++  +N  +S   +   +    
Sbjct: 445 CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAI 504

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L ++M+  G   N+ TFN ++  + ++C  EEAL L + ++  GI  + + ++ I++  
Sbjct: 505 ELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVL 564

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            +   +E A+++F  +  M    + P +V +N I++  CK    + A +    M+     
Sbjct: 565 SREDRIEEAVQMFHAVQDMG---MRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCM 621

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            N  TY  LI+G AR G  +EA  +  E+  RG++  +++ +
Sbjct: 622 PNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLIED 663


>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 228/445 (51%), Gaps = 4/445 (0%)

Query: 48  WKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNW 107
           WK L  ++  LT   V  ++ + +K   L+LEF+ WV   N  SH+LE+   I+H+L   
Sbjct: 47  WKKLTSLSTHLTPFRVKHILLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKN 106

Query: 108 RRFDDALLLMGNLMSANSVS-PLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAY 166
           R+F  A L++ +++    +  P +  E +L SY +C ++P VFD+L +    +     A 
Sbjct: 107 RKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNAT 166

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D   ++K  G   ++ + N +LS L+ L+ +      YKEM  C    NV T N+V+ A 
Sbjct: 167 DTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAF 226

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           CK  KLE+A+ ++  M   GI PN   +N +I   C+ G L  A+KL      M    V 
Sbjct: 227 CKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKL---KNSMRAKGVE 283

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            N VT N +I+GFCK G++  A ++   M    +  N  TY TLI+G+++ G+SE   RL
Sbjct: 284 ANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRL 343

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EM + G+  + + YN+ I  L  EG  + A +++ ++  +++ P+  T+S L  G C 
Sbjct: 344 YEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCI 403

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
                +AF+L+  ++      +  ++N+L++  CK+ +   A  +L  M  R   P    
Sbjct: 404 RNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDV 463

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMK 491
              +  G C  G    A+++   +K
Sbjct: 464 LSEIYHGLCCCGKEHLAMKLSSELK 488



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 171/363 (47%), Gaps = 30/363 (8%)

Query: 291 THNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           TH+ I++   K  + + AE I +  ++K  ID   + +  ++  Y    SS    R+ D 
Sbjct: 95  THSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSP---RVFDS 151

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEG-----DVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           + K  L       N+T  +L  +G      VE     LS ++D H               
Sbjct: 152 LFK-TLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHR-------------- 196

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
                V  A   + ++    +  + Y+ N+++   CKS  L  A Q+   M   G+ P+ 
Sbjct: 197 -----VDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPND 251

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            +Y TLI GYC+ G +  AV++  +M+    + N+V +NS+I+G CK+  L  A  +   
Sbjct: 252 TSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSE 311

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            + + +  + ITYNTLING+   G       ++ EM   G+  + + YN LI  LCK G 
Sbjct: 312 MKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGK 371

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A  ++K +    ++P+  T++ L++      + +   +L+  MV  G  P+ QT+N 
Sbjct: 372 TKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNM 431

Query: 644 IIS 646
           ++S
Sbjct: 432 LVS 434



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 3/256 (1%)

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS--YNILINYLCKSNNLAAAKQLLSSMI 456
           ++ K +   G +    KL   +L  + + D+    ++ L   L        A      M 
Sbjct: 114 LILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMK 173

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G +P + +    +        ++ A+  Y+ M++    PN+   N ++   CK   L+
Sbjct: 174 GYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLE 233

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  + +  + +G+  +  +YNTLI GY   G +  A  + + MR  G+  N V +N LI
Sbjct: 234 KAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLI 293

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           +  CK G   +A ++   M +  + P+ +TY TL+   S+  + E    L+++M  +GV 
Sbjct: 294 DGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVK 353

Query: 636 PDNQTYNAIISPLLGE 651
            D  TYNA+I  L  E
Sbjct: 354 ADILTYNALILGLCKE 369


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/439 (31%), Positives = 222/439 (50%), Gaps = 10/439 (2%)

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           E+    KL  EM + G   N   +  VI  LC + ++ +AL +   M   G+  + V F 
Sbjct: 302 ELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFT 361

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I+  C  GDL  A +LF +M       +  + VTH  +ING C+ G ++ A+ +   M
Sbjct: 362 TVISGFCSKGDLAAARRLFEEM---QKRGLAADRVTHTALINGLCRAGELKEADRVLQEM 418

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           +  G+D +V TY  LIDGY + G+  EA R+ +EMV R + PN V Y +    L  +GDV
Sbjct: 419 VDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDV 478

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  +L +M +K +  + +TY+ L  GLC+ G ++QA ++  ++       D Y+Y  L
Sbjct: 479 RAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTL 538

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ LCKS     A  +L  M+ +G+ P I TY  L++G+C  G +EG  ++ E M +   
Sbjct: 539 IDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNV 598

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAF 553
           +PN+V YNS++   C D ++ +   + +   SQ +   +  TYN LI G+     + EA 
Sbjct: 599 RPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVA-PNENTYNILIKGHCKARNMKEAL 657

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII--PDYVTYTTLVT 611
               EM   G+ +    Y+ LI  L K   + +AR     M   G+   PD  ++   ++
Sbjct: 658 YFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDIS 717

Query: 612 RFSKNCSPEEVIELHDDMV 630
               N   E  I L D++V
Sbjct: 718 FNEDNL--ESTITLCDELV 734



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 263/523 (50%), Gaps = 23/523 (4%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F+E  + +Y+   + PA FD L+           + +++++L+  G S S  + N  LS 
Sbjct: 185 FVEQFIFTYKAFSSDPASFDLLLLCLP-------SAELLRRLRQYGLSPSPESCNAVLSR 237

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L     I  F +L  +        NV + N+++ AL    +L++A   +  M      P+
Sbjct: 238 LPLDEAIALFRELPDK--------NVCSHNILLKALLSAGRLKDACQHFDEMSSP---PD 286

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV +  +++  C  G+LE A+KL  +M     +S   N+  +  +I   C  G+V  A  
Sbjct: 287 VVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES---NATVYTSVIALLCNKGQVSDALR 343

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G+  +   + T+I G+   G    A RL +EM KRGL  + V + + I+ L 
Sbjct: 344 VLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLC 403

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+++ A  VL +M+DK +  D  TY++L  G C+ G + +AF++HN+++   +  +  
Sbjct: 404 RAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV 463

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  L + LCK  ++ AA +LL  M  +GL  ++ TY +LI+G CK GN+E A+++   M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
           +    + ++  Y ++I+ LCK    D A ++LQ     G+  +I TYN L+NG+ ++G++
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
                +   M    +  N V YN L+   C     +   E+ K M    + P+  TY  L
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNIL 643

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    K  + +E +  H +M+  G+     +Y+A+I  LL +K
Sbjct: 644 IKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIR-LLNKK 685



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 160/340 (47%), Gaps = 3/340 (0%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           AL+    + G  + A  V+Q++  KG  V +  +   +    K   +   ++++ EMV  
Sbjct: 397 ALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGR 456

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
               NV T+  +   LCK+  +  A  L + M   G+  NV  +N +IN  C+ G+LE A
Sbjct: 457 RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQA 516

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           +++  +M      +   +  T+  +I+  CK G  + A  +   M+  GI  ++ TY  L
Sbjct: 517 MRIMTEMEAAGHRT---DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           ++G+   G  E   +L + M+++ + PN V YNS +     + +++    +   M  + +
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV 633

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  TY+IL KG C+   +K+A   H +++E+ +   A SY+ LI  L K    + A+ 
Sbjct: 634 APNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
               M   GL  +   Y   +D      N+E  + + + +
Sbjct: 694 FFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDEL 733



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 130/285 (45%), Gaps = 12/285 (4%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGL-LDSYEICKATPAVFDALVRACTQIGAT 162
           +V +    D L   G++ +AN +      +GL L+ Y         +++L+    + G  
Sbjct: 462 VVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVY--------TYNSLINGLCKFGNL 513

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A  ++ +++  GH   ++ +   +  L K  E  R   + +EM+  G   ++ T+N++
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +   C   ++E    L   ML+  + PNVV +N ++ + C   +++   ++++ M     
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGM---HS 630

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             V PN  T+N +I G CK   ++ A      MI+ G+     +Y+ LI    +     E
Sbjct: 631 QEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSE 690

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           A    D+M   GL     VY+  +   F E ++E  + +  ++++
Sbjct: 691 ARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 234/474 (49%), Gaps = 46/474 (9%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+    + G T+ A+DV+  L   G  +   + N  L+ L +  E  R   L  EM    
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG------IWPNVVCFNMIINEACQVG 265
              NV TF ++I  LCK  +++EAL ++ +M   G      + P+V+ +N +I+  C+VG
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVG 394

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
             E  L L  +M   S    +PN+VT+NC+I+G+CK   +E A E+   M K G+  NV 
Sbjct: 395 RQEEGLGLVERM--RSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452

Query: 326 TYATLIDGYARGG-----------------------------------SSEEALRLCDEM 350
           T  TL+DG  + G                                   + E+A+ L DEM
Sbjct: 453 TLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           ++ G  P+ +VY + I  L   G ++ A FVLS M +    PD  ++++L  G CR   +
Sbjct: 513 LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKL 572

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A+++  ++    +  D  +YN LI++  K+ + + A +L+  M+  GL+P ++TYG L
Sbjct: 573 DEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL 632

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           I  YC  GN++ A++++ +M    K  PN VIYN +IN LC+   +D A SL+   +  G
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           +  +  T+N +  G      +++AF +   M       + +   IL  +L   G
Sbjct: 693 VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 265/547 (48%), Gaps = 22/547 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++ +L    R DDAL L+  ++   +  P     G +           VF AL +   ++
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHI-----------VFSALSKR-DKV 245

Query: 160 GATEGAYDVIQKL-KVKGHSVSIHA-W-NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
           G      +++  + K   H V  ++ W    +S L +     R W +   ++  G V   
Sbjct: 246 GRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEA 305

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            + N ++ AL +  + +   +L   M +  I PNVV F ++IN  C+   ++ AL++F K
Sbjct: 306 ASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEK 365

Query: 277 M--GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLID 332
           M  G  +G  V P+ +T+N +I+G CK+GR E    +   M ++   C  N  TY  LID
Sbjct: 366 MNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERM-RSQPRCMPNTVTYNCLID 424

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           GY +    E A  L D+M K G+ PN V  N+ +  +   G + GA+   ++M  K +  
Sbjct: 425 GYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKG 484

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  TY+ L +  C    +++A +L +++LE     DA  Y  LI+ L ++  L  A  +L
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           S M   G  PDI+++  LI+G+C+   ++ A ++ + M+    KP+ V YN++I+   K 
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604

Query: 513 ASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG-IAVNKVG 570
                A  L++   + GL+  + TY  LI+ Y +NG + EA  +F +M +   +  N V 
Sbjct: 605 GDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVI 664

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YNILIN LC+      A  LM  M + G+ P+  T+  +     +     +  EL D M 
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMT 724

Query: 631 LSGVSPD 637
               +PD
Sbjct: 725 EHACNPD 731



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 232/516 (44%), Gaps = 50/516 (9%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVS--CGYVENVNTFNLVIYALCKECKL------E 233
           H  N  +  L +   +     L  EM+     +  N NT ++V  AL K  K+      E
Sbjct: 193 HIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEE 252

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA-------LKL------------- 273
           E + L  +  +  ++PN +    +I+  C+ G  + A       +KL             
Sbjct: 253 EIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALL 312

Query: 274 --------FRKMGVMSGD----SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG-- 319
                   F++M  +  +     + PN VT   +IN  CK  RV+ A E+ +  +  G  
Sbjct: 313 TALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEV-FEKMNGGES 371

Query: 320 ----IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL-MPNNVVYNSTIHWLFAEGD 374
               ++ +V TY TLIDG  + G  EE L L + M  +   MPN V YN  I        
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A  +   M    + P+  T + L  G+C++G +  A +  N++  + + G+A +Y  
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI   C  NN+  A +L   M+  G  PD I Y TLI G  + G ++ A  V   MK+  
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
             P++V +N +ING C+   LD A  +L+  +  G+  D +TYNTLI+ +   G  + A 
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI-LHGIIPDYVTYTTLVTR 612
            +  +M   G+    V Y  LI+  C  G   +A ++ + M     + P+ V Y  L+  
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINS 671

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +    +  + L DDM + GV P+  T+NA+   L
Sbjct: 672 LCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL 707



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 196/427 (45%), Gaps = 17/427 (3%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           +++ L  +RR D+AL +   +    S        G L   ++       ++ L+    ++
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGES-------NGFLVEPDVI-----TYNTLIDGLCKV 393

Query: 160 GATEGAYDVIQKLKVKGHSV-SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           G  E    ++++++ +   + +   +N  +    K + I    +L+ +M   G   NV T
Sbjct: 394 GRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVT 453

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            N ++  +CK  ++  A+  +  M   G+  N V +  +I   C V ++E A++LF +M 
Sbjct: 454 LNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM- 512

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           + +G S  P+++ +  +I+G  + G+++ A  +   M +AG   ++ ++  LI+G+ R  
Sbjct: 513 LEAGCS--PDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKN 570

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             +EA  +  EM   G+ P+ V YN+ I      GD   A  ++  M+ + + P   TY 
Sbjct: 571 KLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYG 630

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVG-DAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
            L    C NG + +A K+   +     V  +   YNILIN LC+ N +  A  L+  M V
Sbjct: 631 ALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKV 690

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           +G+ P+  T+  +  G  +   +  A ++ + M +    P+ +    +   L        
Sbjct: 691 KGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAK 750

Query: 518 AKSLLQA 524
            KS +Q 
Sbjct: 751 LKSFVQG 757


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 265/540 (49%), Gaps = 13/540 (2%)

Query: 35  VFRAICVNLRQRKWKIL--EQMAPSLTNSLVNRVV---SEFRKSPKLALEFYTWVGENNR 89
           +  ++C  + +  W  L   + A +LT++ +++V+    + R  P     F+ W      
Sbjct: 14  LIESVCAIIVKGDWNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWAQSIPH 73

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           ++HSL SS +++H+L   R F  A  ++  +     +S    L  L+  ++  +    V 
Sbjct: 74  YTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSHVL 133

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
             +V    +   T  A  V +++ +      +HA    ++ L+K       WK+YK MV 
Sbjct: 134 SWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQ 193

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V N+  +N +I+A  K   +E A  +   M   G+ P++  +N +I   C+ G    
Sbjct: 194 DGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYE 253

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL +  KM     + +  + V++N +I GFCK G++  A  + +  IK  I  +V TY T
Sbjct: 254 ALSVQDKM---EREGINLDIVSYNSLIYGFCKEGKMREAMRM-FGEIKDAIPNHV-TYTT 308

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDGY +    EEALRL + MV +GL P  V YNS +  L ++G +  A  +L +M ++ 
Sbjct: 309 LIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERK 368

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  D  T + L    C+ G +  A K   ++LE  +  ++++Y  LI+  CK++ L +AK
Sbjct: 369 VQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAK 428

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +LL  M+  G  P+  TY  ++D YCK  N +  + + +         N+ +Y ++I  L
Sbjct: 429 ELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRL 488

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM--RNVGIAV 566
           CK   ++ A+ LL   +  G+  D++ Y +L   Y+ +G    A  M  EM  R + I V
Sbjct: 489 CKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITV 548



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 170/332 (51%), Gaps = 7/332 (2%)

Query: 322 CNVRTY----ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           CN++ +      L++   + G +    ++   MV+ G++PN  VYN  IH      DVE 
Sbjct: 159 CNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVER 218

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A F+L++M  K + PD FTY+ L    C+ G   +A  + +++  E +  D  SYN LI 
Sbjct: 219 AEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIY 278

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             CK   +  A ++     ++  IP+ +TY TLIDGYCK    E A+++ E M      P
Sbjct: 279 GFCKEGKMREAMRMFGE--IKDAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYP 336

Query: 498 NLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
            +V YNSI+  LC D  + DA K L + S+R    D++T NTLIN Y   G +  A    
Sbjct: 337 GVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFK 396

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           ++M   G+  N   Y  LI+  CK    + A+EL+  M+  G  P+Y TY+ +V  + K 
Sbjct: 397 TKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKK 456

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            + + V+ L D+ +  G   +   Y A+I  L
Sbjct: 457 DNTDAVLALPDEFLSKGFCLNISLYRALIRRL 488



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 203/421 (48%), Gaps = 16/421 (3%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N +  + ++    K     +A+ ++ +M    + P++    +++N   + G      K++
Sbjct: 129 NSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVY 188

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           ++M     D V+PN   +NC+I+   K   VE AE I   M   G+  ++ TY TLI  Y
Sbjct: 189 KRM---VQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALY 245

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G   EAL + D+M + G+  + V YNS I+    EG +  A+ +  ++ D    P+H
Sbjct: 246 CKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDA--IPNH 303

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ L  G C+    ++A +L   ++ + +     +YN ++  LC    +  A +LL  
Sbjct: 304 VTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHE 363

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  R +  D +T  TLI+ YCK G++  A++    M +    PN   Y ++I+G CK + 
Sbjct: 364 MSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSE 423

Query: 515 LDAAKSLLQASQRIGLLDA------ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           L++AK LL      G+LDA       TY+ +++ Y          A+  E  + G  +N 
Sbjct: 424 LESAKELL-----FGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNI 478

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             Y  LI  LCK    + A +L+  M   GI  D V YT+L   + K+ +     ++ ++
Sbjct: 479 SLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEE 538

Query: 629 M 629
           M
Sbjct: 539 M 539



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 179/373 (47%), Gaps = 12/373 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ L+ AC++    E A  ++ +++VKG    I  +N  ++   K         +  +M
Sbjct: 202 VYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKM 261

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   ++ ++N +IY  CKE K+ EA+ ++   +K  I PN V +  +I+  C+  + 
Sbjct: 262 EREGINLDIVSYNSLIYGFCKEGKMREAMRMFGE-IKDAI-PNHVTYTTLIDGYCKANEF 319

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL+L R+M V  G  + P  VT+N I+   C  GR+  A ++ + M +  +  +  T 
Sbjct: 320 EEALRL-REMMVAKG--LYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTC 376

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI+ Y + G    AL+   +M++ GL PN+  Y + IH      ++E A  +L  M+D
Sbjct: 377 NTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLD 436

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P++ TYS +    C+         L ++ L +    +   Y  LI  LCK   +  
Sbjct: 437 AGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIEC 496

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A++LL  M  +G+  D + Y +L   Y K GN   A  + E M +      + IY     
Sbjct: 497 AEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIYRCF-- 554

Query: 508 GLCKDASLDAAKS 520
                ++LDA+++
Sbjct: 555 -----SALDASQN 562



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 6/225 (2%)

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           I+I+Y  KS     A Q+   M +  L P +     L++   K G      +VY+ M + 
Sbjct: 136 IVIHY-AKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQD 194

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
              PN+ +YN +I+   K   ++ A+ +L   +  G++ D  TYNTLI  Y   G   EA
Sbjct: 195 GVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEA 254

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-ILHGIIPDYVTYTTLVT 611
            ++  +M   GI ++ V YN LI   CK G   + RE M++   +   IP++VTYTTL+ 
Sbjct: 255 LSVQDKMEREGINLDIVSYNSLIYGFCKEG---KMREAMRMFGEIKDAIPNHVTYTTLID 311

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + K    EE + L + MV  G+ P   TYN+I+  L  +    D
Sbjct: 312 GYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRD 356


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 256/508 (50%), Gaps = 4/508 (0%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           + L  + +   +C      +  ++    + G    A D+ +++  +G    +  +++ + 
Sbjct: 207 DLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVH 266

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K   +G+     ++MV+ G + +  T+N +IY      + +EA+ ++  M +  I P
Sbjct: 267 ALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP 326

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +VV  NM++   C+ G ++ A  +F  M  M G +  P+  ++  ++NG+   G +    
Sbjct: 327 DVVTLNMLMGSLCKYGKIKEARDVFDTMA-MKGQN--PDVFSYKIMLNGYATKGCLVDMT 383

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           ++   M+  GI  ++ T++ LI  YA  G  ++A+ + +EM   G+ P+ V Y + I  L
Sbjct: 384 DLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAAL 443

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G ++ A+   + MID+ + PD + Y  L +G C +G + +A +L  +++   M  D 
Sbjct: 444 CRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDI 503

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             ++ +IN LCK   +  A+ +    +  G  PD + Y  L+DGYC  G +E A++V++ 
Sbjct: 504 VFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGK 548
           M     +PN+V+Y +++NG CK   +D   SL +   + G+  + I YN +I+G F+ G+
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
              A   F EM   GIA+NK  YNI++    K  C+ +A  L K +    +  D +T  T
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           ++    +    EE  +L   +  SG+ P
Sbjct: 684 MIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 156/624 (25%), Positives = 288/624 (46%), Gaps = 39/624 (6%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
            P+L  +L NR  S  +    L+   +T+          L   C   H      R + AL
Sbjct: 90  GPALAVALFNRAASRAQGPRVLSPTSHTYA--------ILMDCCTRAH------RPELAL 135

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG-------------- 160
              G L+       +     LL  +   K T    D L+    ++G              
Sbjct: 136 AFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 195

Query: 161 ----ATEGAYDVIQKLKVKGHSV---SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                  G  D + ++  +G +V    + A+   +    K  ++ +   L+KEMV  G  
Sbjct: 196 LCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIP 255

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            ++ T++ V++ALCK   + +A +   +M+  G+ P+   +N +I      G  + A+++
Sbjct: 256 PDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 315

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F++M      S+LP+ VT N ++   CK G+++ A ++   M   G + +V +Y  +++G
Sbjct: 316 FKEM---RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNG 372

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           YA  G   +   L D M+  G+ P+   ++  I      G ++ A+ + ++M D  + PD
Sbjct: 373 YATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 432

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+ +   LCR G +  A +  NQ++++ +  D Y+Y+ LI   C   +L  AK+L+ 
Sbjct: 433 VVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELIL 492

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            ++  G+  DI+ + ++I+  CK G I  A  +++    V + P+ V+Y+ +++G C   
Sbjct: 493 EIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVG 552

Query: 514 SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            ++ A  +  A    G+  + + Y TL+NGY   G+I E  ++F EM   GI  + + YN
Sbjct: 553 KMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 612

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           I+I+ L   G    A+     M   GI  +  TY  ++  F KN   +E I L  ++   
Sbjct: 613 IIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAM 672

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
            V  D  T N +I+ +   +  E+
Sbjct: 673 NVKIDIITLNTMIAGMFQTRRVEE 696



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/534 (23%), Positives = 242/534 (45%), Gaps = 52/534 (9%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-------LYKEMVSCGYVEN 215
           E A+D++ +L+ +G  V     N FL+ L +                L+    S      
Sbjct: 50  EDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPR 109

Query: 216 VNTFNLVIYALCKEC-----KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           V +     YA+  +C     + E AL+ + ++L++G+  +++  N ++   C+    + A
Sbjct: 110 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYA 328
           L +        G   +P+  +++ ++   C  G+   A+++   M + G  C  +V  Y 
Sbjct: 170 LDILLHRTPELG--CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYT 227

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+ID + + G   +A  L  EMV+RG+ P+ V Y+S +H L     +  A   L  M++K
Sbjct: 228 TVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNK 287

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD++TY+ L  G    G  K+A ++  ++    ++ D  + N+L+  LCK   +  A
Sbjct: 288 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEA 347

Query: 449 KQLLSSMIVR-----------------------------------GLIPDIITYGTLIDG 473
           + +  +M ++                                   G+ PDI T+  LI  
Sbjct: 348 RDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y   G ++ A+ ++  M+    KP++V Y ++I  LC+   +D A          G+  D
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              Y+ LI G+  +G + +A  +  E+ N G+ ++ V ++ +IN LCK G    A+ +  
Sbjct: 468 KYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFD 527

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +  G  PD V Y+ L+  +      E+ + + D MV +G+ P+   Y  +++
Sbjct: 528 LTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVN 581



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 165/319 (51%), Gaps = 3/319 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L++A    G  + A  +  +++  G    +  +   ++ L ++ ++    + + +M
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +   ++ +I   C    L +A  L   ++ +G+  ++V F+ IIN  C++G +
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G    P++V ++ +++G+C +G++E A  +  AM+ AGI+ NV  Y
Sbjct: 520 MDAQNIF-DLTVNVGQH--PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 576

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM+++G+ P+ ++YN  I  LF  G    A     +M +
Sbjct: 577 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTE 636

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  +  TY+I+ +G  +N C  +A  L  ++   ++  D  + N +I  + ++  +  
Sbjct: 637 SGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 696

Query: 448 AKQLLSSMIVRGLIPDIIT 466
           AK L +S+   GL+P ++T
Sbjct: 697 AKDLFASISRSGLVPCVVT 715



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 185/383 (48%), Gaps = 3/383 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+ +  + G  + A DV   + +KG +  + ++   L+       +     L+  M+  G
Sbjct: 334 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDG 393

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              ++ TF+++I A      L++A+ ++  M   G+ P+VV +  +I   C++G ++ A+
Sbjct: 394 IAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAM 453

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           + F +M       V P+   ++C+I GFC  G +  A+E+   ++  G+  ++  ++++I
Sbjct: 454 EKFNQM---IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSII 510

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           +   + G   +A  + D  V  G  P+ VVY+  +      G +E AL V   M+   I 
Sbjct: 511 NNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 570

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+   Y  L  G C+ G + +   L  ++L++ +      YNI+I+ L  +     AK  
Sbjct: 571 PNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVK 630

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M   G+  +  TY  ++ G+ K    + A+ +++ ++ +  K +++  N++I G+ +
Sbjct: 631 FHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 690

Query: 512 DASLDAAKSLLQASQRIGLLDAI 534
              ++ AK L  +  R GL+  +
Sbjct: 691 TRRVEEAKDLFASISRSGLVPCV 713


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 185/667 (27%), Positives = 303/667 (45%), Gaps = 69/667 (10%)

Query: 29  PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRK-------SPKLALEFY 81
           PST  + +  +   +R  K + L Q A  +  S  +  VSE           P+L L F+
Sbjct: 23  PSTPHLKY-LVKDTIRIIKTETLWQEALEIRFSETDTRVSEIAHFVFDQIHDPRLGLNFF 81

Query: 82  TWVGENNRFSHSLES--SCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
            W  + +  S+SL+     +++ LL  +R F +   L+  + S   +   E L  ++ +Y
Sbjct: 82  EWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAY 141

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
                +  V +AL    T I       DV              A N+ L+ LV   ++  
Sbjct: 142 ---AGSGLVKEALELYNTVIDVHNCVPDVF-------------ACNSLLNLLVHHGKVEI 185

Query: 200 FWKLYKEMVS-CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             K+Y EMV   G V+N  T  +V   LCKE K+EE   L  +    G  PN+V +N +I
Sbjct: 186 ARKVYDEMVDRNGDVDNY-TVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLI 244

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR-------------- 304
           +  C+ GD+E A  LF+++ V      LP   T+  +IN FCK G+              
Sbjct: 245 DGYCKNGDIERANLLFKELKV---KGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKER 301

Query: 305 ----------------------VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
                                 +E A+ +R+ MI++G + ++ TY TLI+G    G   E
Sbjct: 302 GLAVSLQIFNGIIDARFKHGCEIEAADAVRW-MIESGCEPDMATYNTLINGSCSKGKVRE 360

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A  L +  ++RGL PN   Y   IH     G+   A  +L +M ++    D   Y  L  
Sbjct: 361 AEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVH 420

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GL   G V  A  + ++++E  ++ DA  YN+L++ LCK     AAKQLL  M+ + + P
Sbjct: 421 GLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTP 480

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSL 521
           D     TL+DG+ + GN++ A ++++   +     ++V  N++I G CK   + DA    
Sbjct: 481 DAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCF 540

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
            +    +   D  TY+T+I+GY     +  A  MF  M       N V +  LIN  C+ 
Sbjct: 541 KRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRN 600

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +A ++ + M   G  P+ VTYT L+  F K     +     + M+++   P++ T+
Sbjct: 601 GDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATF 660

Query: 642 NAIISPL 648
           N +++ L
Sbjct: 661 NYLVNGL 667



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 274/583 (46%), Gaps = 32/583 (5%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEG 134
           K ALE Y  V + +     + +  ++++LLV+  + + A  +   ++  N         G
Sbjct: 148 KEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRN---------G 198

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
            +D+Y +C  T  +       C + G  E    +I+K   KG   +I  +N  +    K 
Sbjct: 199 DVDNYTVCIVTKGL-------CKE-GKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKN 250

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
            +I R   L+KE+   G++  V T+  +I A CK+ K E    L   M + G+  ++  F
Sbjct: 251 GDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIF 310

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N II+   + G    A    R M + SG    P+  T+N +ING C  G+V  AEE+   
Sbjct: 311 NGIIDARFKHGCEIEAADAVRWM-IESG--CEPDMATYNTLINGSCSKGKVREAEELLEH 367

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
            I+ G+  N  +Y  LI  +++ G    A  L  EM +RG   + + Y + +H L   G+
Sbjct: 368 AIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGE 427

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V+ AL V   M+++ I PD   Y++L  GLC+ G    A +L  ++L++++  DA+    
Sbjct: 428 VDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNAT 487

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L++   +  NL  AK+L    I RG+   ++    +I GYCK G +  A+  ++ M    
Sbjct: 488 LVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGV 547

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAF 553
             P+   Y++II+G  K   L  A  +     ++    + +T+ +LING+  NG +  A 
Sbjct: 548 HSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAE 607

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +F EMR+ G   N V Y ILI + CK G   +A    + M+++  IP+  T+  LV   
Sbjct: 608 KVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667

Query: 614 S-----------KNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +            N  P   +E    M+  G       YN+I+
Sbjct: 668 TNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSIL 710



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 175/386 (45%), Gaps = 49/386 (12%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+ A ++ G    A +++ ++  +GH++ + A+   +  LV   E+     +  +M+
Sbjct: 380 YTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMM 439

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G + + N +N+++  LCK+ +   A  L   ML   + P+      +++   + G+L+
Sbjct: 440 ERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLD 499

Query: 269 FALKLFR----------------------KMGVMSGDSVL-----------PNSVTHNCI 295
            A KLF+                      K G+M+ D++L           P+  T++ I
Sbjct: 500 EAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN-DALLCFKRMFNGVHSPDEFTYSTI 558

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G+ K   +  A  +   M+K     NV T+ +LI+G+ R G    A ++ +EM   G 
Sbjct: 559 IDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGF 618

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV----K 411
            PN V Y   I +   EG +  A F    M+     P+  T++ L  GL  N  +    K
Sbjct: 619 EPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSK 678

Query: 412 QAFKLHNQVLE--EHMVGDAY-----SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           ++    N  LE    M+ D +     +YN ++  LC+   +  A QL   M+ +G  PD 
Sbjct: 679 RSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDP 738

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENM 490
           +++  L+ G C    +EG +Q + N+
Sbjct: 739 VSFIALLHGLC----LEGRLQDWNNV 760


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/611 (26%), Positives = 291/611 (47%), Gaps = 9/611 (1%)

Query: 46  RKWKIL---EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVH 102
           + WKI      ++ ++    V +V+       +LAL F+ ++G +  F HS  S C ++H
Sbjct: 52  QSWKIAFNNSSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIH 111

Query: 103 LLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK-ATPAVFDALVRACTQIGA 161
            L+    F  A  L+   +    ++P +  E   +SY+  K ++ + FD L++   Q   
Sbjct: 112 SLLQNNLFWPASSLL-QTLLLRGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKR 170

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
                 V+  ++  G    +   +  L+ L ++ +  +  +L+  +V+ G   +   + +
Sbjct: 171 VMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTV 230

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           V+  LC+     +A  +  +   +G   ++V +N+ IN  C+   +  A+++ R +G   
Sbjct: 231 VVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLG--- 287

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              +  + VT+  ++ G C++   E   E+   MI+ G   +    + LI+G  + GS E
Sbjct: 288 EKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIE 347

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            A  L +++ K G++PN  VYNS I+ L   G +E A  + S M ++ + P+  TY+IL 
Sbjct: 348 GAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILI 407

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G  R   +  AF   N+++E  +    YSYN +IN  CK   +  A+ L   M+ +GL 
Sbjct: 408 DGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLK 467

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P + TY +LI GYCK G +  A ++Y  M      PN V + ++I GLC+   +  A  L
Sbjct: 468 PTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKL 527

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                 + +L + +TYN LI G+   G    AF +  EM   G++ +   Y  LI  LC 
Sbjct: 528 FDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCS 587

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A+E +  +       D + YT L+  F K    +E +    +MV  G+  D  +
Sbjct: 588 TGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVS 647

Query: 641 YNAIISPLLGE 651
           Y  +IS  L +
Sbjct: 648 YAVLISGALNQ 658



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 275/559 (49%), Gaps = 36/559 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A+++ L   R+F   L L   L++A  V P        D Y        ++  +V+   +
Sbjct: 195 ALLNALARIRKFRQVLELFDTLVNA-GVKP--------DCY--------IYTVVVKCLCE 237

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +     A ++I + +  G S+SI  +N F++ L K   +    ++ + +   G   ++ T
Sbjct: 238 LKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVT 297

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +  ++  LC+  + E  + +   M++ G  P+    + +I    ++G +E A +L  K+G
Sbjct: 298 YCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVG 357

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +    V+PN   +N +IN  CK G++E AE +   M + G++ N  TY  LIDG+ R  
Sbjct: 358 KLG---VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRA 414

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             + A    ++M++ G+      YNS I+     G ++ A  +  +M+DK + P   TY+
Sbjct: 415 KLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYT 474

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C++G V +AFKL++++  + +  +  ++  LI  LC+ N +A A +L   M+  
Sbjct: 475 SLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVEL 534

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            ++P+ +TY  LI+G+C+ GN   A ++ + M K    P+   Y  +I GLC    +  A
Sbjct: 535 KILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEA 594

Query: 519 KSLL----QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           K  +       QR   LD + Y  L+ G+   G+I EA     EM   G+ ++ V Y +L
Sbjct: 595 KEFINDLHHKHQR---LDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVL 651

Query: 575 INFLCKFGCYQQAR----ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           I+     G   Q      EL++ M   G+ PD V YT L+  F K+ + ++  E    M+
Sbjct: 652 IS-----GALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706

Query: 631 LSGVSPDNQTYNAIISPLL 649
             G  P++ TY A+++ L 
Sbjct: 707 GEGYVPNSVTYTALVNGLF 725



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 263/573 (45%), Gaps = 72/573 (12%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI------- 197
           + A    L+    ++G+ EGA++++ K+   G   ++  +N+ ++ L K  ++       
Sbjct: 329 SEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLF 388

Query: 198 ----------------------GRFWKL------YKEMVSCGYVENVNTFNLVIYALCKE 229
                                 GR  KL      + +M+ CG    V ++N +I   CK 
Sbjct: 389 SVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKF 448

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            K++ A  L+  M+  G+ P V  +  +I+  C+ G +  A KL+ +M   +G  + PN+
Sbjct: 449 GKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM---TGKGIAPNT 505

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT   +I G C++ ++  A ++   M++  I  N  TY  LI+G+ R G++  A  L DE
Sbjct: 506 VTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDE 565

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+K+GL P+   Y   I  L + G V  A   ++D+  KH   D   Y+ L +G C+ G 
Sbjct: 566 MIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGR 625

Query: 410 VKQA----------------------------------FKLHNQVLEEHMVGDAYSYNIL 435
           +K+A                                  F+L  ++  + M  D   Y IL
Sbjct: 626 IKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTIL 685

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+   KS NL  A +    MI  G +P+ +TY  L++G  K G +  A  +++ M   E 
Sbjct: 686 IDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEA 745

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
            PN + Y   ++ L K+ +++ A  L  A  +    + +TYN LI GY   GK  EA  +
Sbjct: 746 IPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKL 805

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
              M  +G+  + + Y+  I   CK G    A ++ + M+  G+ PD V +  L+     
Sbjct: 806 LDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCL 865

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           N   +  ++L +DM+L G+ P   TY++++  L
Sbjct: 866 NGELDRALQLRNDMMLRGLKPTQSTYHSLMVQL 898



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 189/443 (42%), Gaps = 67/443 (15%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T A + +L+    + G    A+ +  ++  KG + +   +   +  L ++N++    K
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV----------- 251
           L+ EMV    + N  T+N++I   C+E     A  L   M+K G+ P+            
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586

Query: 252 ------------------------VCFNMIINEACQVGDLEFALK--------------- 272
                                   +C+  ++   C+ G ++ AL                
Sbjct: 587 STGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLV 646

Query: 273 ----------------LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
                           LF  +  M G  + P++V +  +I+GF K G ++ A E  Y MI
Sbjct: 647 SYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G   N  TY  L++G  + G   EA  L   M+    +PN++ Y   +  L  EG++E
Sbjct: 707 GEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNME 766

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL + + M+      +  TY+IL +G C+ G  ++A KL + ++   MV D  +Y+  I
Sbjct: 767 NALQLHNAMLQGSF-ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFI 825

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
              CK  N+ AA  +   M+ RGL PD + +  LI   C  G ++ A+Q+  +M     K
Sbjct: 826 YEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLK 885

Query: 497 PNLVIYNSIINGLCKDASLDAAK 519
           P    Y+S++  L + A L   +
Sbjct: 886 PTQSTYHSLMVQLAQRARLTQVQ 908



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/244 (19%), Positives = 101/244 (41%), Gaps = 34/244 (13%)

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           Q F+   +  +++    +  +++LI +  ++  +     +++ M   GL+P++ T   L+
Sbjct: 138 QIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALL 197

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           +   +       +++++ +     KP+  IY  ++  LC+    + AK ++  ++     
Sbjct: 198 NALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAE----- 252

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                          G +++ V YN+ IN LCK     +A E+ 
Sbjct: 253 -----------------------------GNGCSLSIVTYNVFINGLCKSKRVWEAVEVK 283

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + +   G+  D VTY TLV    +    E  +E+ D+M+  G  P     + +I  L+  
Sbjct: 284 RSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKM 343

Query: 652 KSAE 655
            S E
Sbjct: 344 GSIE 347


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 259/523 (49%), Gaps = 23/523 (4%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           F+E  + +Y+   + PA FD L+           +  ++++++  G S S  A N  LS 
Sbjct: 192 FVEHYISTYKAFSSDPASFDLLLLCLP-------SAPLLRRVRQYGISPSPEACNAVLSR 244

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L     I  F  L  +        NV ++N+++  LC   ++E+A  L+  M      P+
Sbjct: 245 LPLDEAIELFQGLPDK--------NVCSYNILLKVLCGAGRVEDARQLFDEMASP---PD 293

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV + ++I+  C +G+LE A+KL   M V  G  V PN+  +  ++   C  GRV  A  
Sbjct: 294 VVTYGILIHGYCALGELENAVKLLDDM-VARG--VEPNATVYTSVVALLCDKGRVSDALT 350

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+   +  +   Y T++ G+   G    A R  DEM ++GL  + V Y + I+ L 
Sbjct: 351 VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLC 410

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+++ A  VL +M+ + +  D  TY++L  G C+ G + +AF++HN +++  +  +  
Sbjct: 411 RAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV 470

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  L + LCK  ++ AA +LL  M  +GL  +  TY +LI+G CK G ++ A++   +M
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
                KP++  Y ++I+ LCK   LD A  LLQ     G+   I TYN L+NG+ ++G++
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
                +   M    I  N   YN L+   C     +   E+ K M    + P+  TY  L
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNIL 650

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +    K  S +E    H++M+  G      +Y+A+I  LL +K
Sbjct: 651 IKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIR-LLNKK 692



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 229/483 (47%), Gaps = 21/483 (4%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL----KVKGHSVSIHAW 184
           +E  +GL D   +C      ++ L++     G  E A  +  ++     V  + + IH +
Sbjct: 251 IELFQGLPDK-NVCS-----YNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGY 304

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
                    L E+    KL  +MV+ G   N   +  V+  LC + ++ +AL++   M+ 
Sbjct: 305 -------CALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVH 357

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
             +  +   +  +++  C  GDL  A + F +M       +  + VT+  +ING C+ G 
Sbjct: 358 HKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM---QRKGLATDGVTYTTLINGLCRAGE 414

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++ AE++   M+   +D +  TY  L+DGY + G   EA ++ + MV+RG+ PN V Y +
Sbjct: 415 LKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTA 474

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
               L  +GDV+ A  +L +M +K +  +  TY+ L  GLC+ G + QA +    +    
Sbjct: 475 LSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG 534

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  D Y+Y  LI+ LCKS  L  A  LL  M+  G+ P I+TY  L++G+C  G +EG  
Sbjct: 535 LKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK 594

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGY 543
           ++ E M +    PN   YNS++   C   ++ +   + +    R    +  TYN LI G+
Sbjct: 595 KLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGH 654

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
                + EA    +EM   G  +    Y+ LI  L K   + +AR+L   M   G   + 
Sbjct: 655 CKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEP 714

Query: 604 VTY 606
             Y
Sbjct: 715 DVY 717



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 168/401 (41%), Gaps = 54/401 (13%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT------ 157
           LV+ RR+ D +   G  ++ + V+    + GL  + E+ +A   + + L R         
Sbjct: 380 LVSARRWFDEMQRKG--LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 158 --------QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
                   + G    A+ V   +  +G + ++  +      L K  ++    +L  EM +
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   N  T+N +I  LCK   L++A+     M  +G+ P+V  +  +I+  C+ G+L+ 
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A  L ++M     + + P  VT+N ++NGFC  GRVE  +++   M++  I  N  TY +
Sbjct: 558 AHDLLQEM---LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+  Y  G + +    +   M  R + PN   YN                          
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYN-------------------------- 648

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
                    IL KG C+   +K+A   HN+++E+     A SY+ LI  L K      A+
Sbjct: 649 ---------ILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +L   M   G   +   Y   ID      N+E  + + + +
Sbjct: 700 KLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDEL 740



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YNIL+  LC  G  + AR+L   M      PD VTY  L+  +      E  ++L 
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLL 317

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           DDMV  GV P+   Y ++++ L  +    D
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSD 347


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 160/556 (28%), Positives = 257/556 (46%), Gaps = 82/556 (14%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G+  S+  +   +  L K  ++     L ++M   G   NV T+  +I  LCK  +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             +A+    RML+SG  P++V +N +I+  C    ++ A  + +++ V +G    PN +T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQEL-VRNG--FAPNHIT 117

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY--ARGGSSEEALRLCDE 349
           ++ ++   C+  R++ A  +   MI  G  CN+  Y   I G+  AR  SS    R  DE
Sbjct: 118 YSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDE 177

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M++ G +P+ V YN+ I  L   G ++  L +L +M    I PD  T+  +  GLC+   
Sbjct: 178 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR 237

Query: 410 VKQAFKLHNQVLE------------------------------EHM-------VGDAYSY 432
           +  AF++   +LE                              EHM       V + Y++
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH 297

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N  I  LC+S     AK +L  MI  G +P++++Y  +IDG CK GN++ A ++   M  
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 493 VE-KKPNLVIYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKI 549
               KP+++ +N++I+G CK   L  A  LL    ++ I + D +TYNTLI+G    G +
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +A  +  EM+ VG   N V Y  LIN   K G Y++A  L   M   G  PD +TY T+
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTV 477

Query: 610 VTRFSKN-------------------CSP------------------EEVIELHDDMVLS 632
           ++ FSK                    CSP                  E+ + L  +M   
Sbjct: 478 LSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTAR 537

Query: 633 GVSPDNQTYNAIISPL 648
           G S D+ TYN +I+ L
Sbjct: 538 GWSCDSYTYNVLIAKL 553



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/583 (23%), Positives = 265/583 (45%), Gaps = 77/583 (13%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A+   +  L+    + G  + A  ++QK+   G + ++  +   +  L K        + 
Sbjct: 8   ASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 67

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
            K M+  G   ++ T+N +I+ LC   ++++A  +   ++++G  PN + ++ ++   C+
Sbjct: 68  VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCR 127

Query: 264 VGDLEFALKLFRKM-----------------------------GVMSGDSVL-----PNS 289
              L+ A  L R+M                                 GD ++     P+ 
Sbjct: 128 RRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDV 187

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+N  I+G CK G+++   E+   M + GI  +V T+ ++I G  +    ++A ++   
Sbjct: 188 VTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKG 247

Query: 350 MVKRGLMPNNVVY-------------------------------------NSTIHWLFAE 372
           M++RG +P+++ Y                                     N+ I  L   
Sbjct: 248 MLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRS 307

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-DAYS 431
           G    A  +L  MI+    P+  +Y+ +  GLC++G V  A+KL  ++L+      D   
Sbjct: 308 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 367

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGL-IPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +N LI+  CK+  L+ A QLL  M  + + +PD++TY TLIDG  K G+++ A  + + M
Sbjct: 368 FNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM 427

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
           + V  KPN+V Y ++ING  K    + A+SL       G   D ITYNT+++ +   G +
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMM 487

Query: 550 AEAFAMFSEMRNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++A  ++ +++N     + + + Y ILI+  C+    +Q   L++ M   G   D  TY 
Sbjct: 488 SKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYN 547

Query: 608 TLVTRFSKNCS-PEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            L+ + ++    P + + ++  M+     P    +N+++   L
Sbjct: 548 VLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFL 590



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 193/394 (48%), Gaps = 11/394 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F +++    +    + A+ V + +  +G       ++  L +L + N +    ++ + M
Sbjct: 224 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHM 283

Query: 208 --VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
             +  G V  V T N  I ALC+  K   A ++   M++SG  PN++ +N +I+  C+ G
Sbjct: 284 QAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSG 343

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--N 323
           +++ A KL RKM  +      P+ +  N +I+GFCK GR+  A ++   M KA   C  +
Sbjct: 344 NVDDAWKLSRKM--LDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEM-KAKNICVPD 400

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY TLIDG ++ GS ++A  L  EM   G  PN V Y + I+     G  E A  +  
Sbjct: 401 VVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFD 460

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINYLCK 441
           +M  K   PD  TY+ +     + G + +A  ++ Q+  +  +   DA +Y ILI+  C+
Sbjct: 461 EMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCR 520

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG-AVQVYENMKKVEKKPNLV 500
           + +      LL  M  RG   D  TY  LI    +   +   A+ VY+ M   +  P+  
Sbjct: 521 AEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSAS 580

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIG-LLDA 533
           I+NS++    +   +++A+S++Q     G L+DA
Sbjct: 581 IFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 191/399 (47%), Gaps = 21/399 (5%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
           C+I+  L    R DDA  +   ++    V P         +Y I      + D L RA  
Sbjct: 226 CSIISGLCKANRIDDAFQVFKGMLERGCV-PDSL------TYSI------MLDNLSRA-N 271

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           ++   +   + +Q +K  G  + ++  N F+  L +  +      +   M+  G + N+ 
Sbjct: 272 RLDTVDEVLEHMQAMKA-GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 330

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEACQVGDLEFALKLFRK 276
           ++N VI  LCK   +++A  L  +ML SG   P+V+ FN +I+  C+ G L  A +L  +
Sbjct: 331 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIE 390

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M   + +  +P+ VT+N +I+G  K G ++ A+ +   M   G   NV TYA LI+GYA+
Sbjct: 391 M--KAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAK 448

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK--HICPDH 394
            G  EEA  L DEM  +G  P+ + YN+ +      G +  A  V   + +K  +  PD 
Sbjct: 449 HGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDA 508

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA-AKQLLS 453
            TY IL  G CR    +Q   L  ++       D+Y+YN+LI  L ++  + + A  +  
Sbjct: 509 ITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQ 568

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            M+ +  +P    + +L+  + + G++  A  + + M +
Sbjct: 569 QMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNE 607



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 134/290 (46%), Gaps = 15/290 (5%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           L+++    D L   GN+  A  +S       +LDS   CK     F+ L+    + G   
Sbjct: 329 LLSYNFVIDGLCKSGNVDDAWKLS-----RKMLDS-GCCKPDVIFFNTLISGFCKAGRLS 382

Query: 164 GAYDVIQKLKVKGHSV-SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
            A+ ++ ++K K   V  +  +N  +    K   + +   L +EM + G   NV T+  +
Sbjct: 383 QAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAAL 442

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I    K    EEA SL+  M   G +P+++ +N +++   + G +  A  +++++   + 
Sbjct: 443 INGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTS 502

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               P+++T+  +I+G+C+    E    +   M   G  C+  TY  LI   A+   +EE
Sbjct: 503 -YCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI---AKLAETEE 558

Query: 343 ----ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
               AL +  +M+ +  +P+  ++NS +      GDV  A  ++ +M +K
Sbjct: 559 VPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEK 608


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 255/502 (50%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ A +RA  +    +GA  ++ +++ +G   S   +N  +  L K   +    ++   M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G   +  T+  ++Y  C+  +LE AL + + M++ G  P+    + +I+E  +   +
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A  L  K+G +    ++PN   +N +I+  CK  R + A+ +   M   G++ N  TY
Sbjct: 320 EEAFSLACKLGDLG---MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 376

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           A LI    + G  E+AL L D+M  +G+      YNS I+    +G ++ A  +LS M+ 
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P   +YS L  GLCRNG +    +LH ++ E  +  + Y++  LIN  CK   +  
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L   MI   +IP+ +T+  +I+GYC  GNI  A Q+Y+ M ++  KP+   Y S+I+
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC  + +  A   +        +L+  +   L+ G+F  G+  E + ++ EM   G+ +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V + I++    K    +++  L + M   G+ PD + YT ++   SK  +  + +   
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           D MV+ G SP+  T+  +I+ L
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNL 698



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 251/548 (45%), Gaps = 20/548 (3%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++  L    RFDDA  L    M+   + P E       +Y I          L+ A  +
Sbjct: 343 ALIDKLCKNERFDDADRLFKE-MAGRGLEPNEV------TYAI----------LIHALCK 385

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A  +  K++ KG  V+++ +N+ ++   K   + R   L   MV  G      +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++ +I  LC+   L   + L+  M + GI  N   F  +IN  C+   ++ A +LF KM 
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM- 504

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                +V+PN VT N +I G+C +G +  A ++   M++ G+  +  TY +LI G     
Sbjct: 505 --IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              +A     ++     + NN    + ++  F EG       +  +M  + +  D  +++
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           I+     +    +++  L  ++ E+ +  D   Y  +I+ L K  N+  A      M+V 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P+ +T+  LI+  CK G +  A  + + M      PN   YN  ++    +  ++ A
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           K L  A  +  L   +++N LI G    GKI EA  + S++   G + + + Y+ +I+ L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G   +A EL   M+  G+ PD V Y   +   + +   ++ + ++ +M+ SGV P+ 
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862

Query: 639 QTYNAIIS 646
            TY A++S
Sbjct: 863 DTYRALLS 870



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 230/481 (47%), Gaps = 4/481 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +V+ +  +  L  LVK+ +      L+ +M+  G   +   +   I A C+   L+ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L  RM   G+  + V +N+++   C+   ++ A+++     VM    V  + VT+  +
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV---KNVMVNIGVTADEVTYRTL 274

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           + GFC++  +E A  I + MI+ G   +    + +ID   +    EEA  L  ++   G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +PN   YN+ I  L      + A  +  +M  + + P+  TY+IL   LC+ G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L +++ ++ +    Y YN LIN  CK  +L  A+ LLS M+  GL P   +Y  LI G C
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           + G++   ++++  M +     N   + ++ING CKD  +D A  L        ++ + +
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T+N +I GY + G I +AF ++ +M  +G+  +   Y  LI+ LC      +A E +  +
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
                + +  + T L+  F +     E   L D+M + GV  D  ++  I+   L +   
Sbjct: 575 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 655 E 655
           E
Sbjct: 635 E 635



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 185/408 (45%), Gaps = 36/408 (8%)

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +G+     +  N  T + I+    K+ +   A ++   M+++G+  +   Y   I  Y  
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
             + + A  L   M   G+  + V YN  ++ L     V+ A+ V + M++  +  D  T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 397 YSILTKGLCR-----------------------------------NGCVKQAFKLHNQVL 421
           Y  L  G CR                                      V++AF L  ++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  MV + ++YN LI+ LCK+     A +L   M  RGL P+ +TY  LI   CK G IE
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLI 540
            A+ +++ M+    K  +  YNS+ING CK  SLD A+ LL    + GL   A +Y+ LI
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            G   NG ++    +  EM   GIA N   +  LIN  CK     +A  L   MI   +I
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+ VT+  ++  +    +  +  +L+D MV  G+ PDN TY ++IS L
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 1/342 (0%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + +GI  N  T + ++    +      A  L D+M++ G+  +  VY + I       ++
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +GA  ++  M  + +      Y++L  GLC+N  V++A ++ N ++   +  D  +Y  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +   C+   L  A ++   MI  G +P       +ID   K   +E A  +   +  +  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  YN++I+ LCK+   D A  L +     GL  + +TY  LI+     G I +A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F +MR+ GI V    YN LIN  CK G   +AR L+  M+  G+ P   +Y+ L+    
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +N      +ELH +M   G++ +N T+ A+I+    +K  ++
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 189/424 (44%), Gaps = 6/424 (1%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
            N   S  +E    +    + W  +    L+ G              + ++DS  I    
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI--PN 512

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
              F+ ++     +G    A+ +  ++   G     + + + +S L   + + +  +   
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           ++ +   V N  +   ++Y   +E +  E   L+  M   G+  ++V F +I+  A +  
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D E +  LFR+M       V P+ + + C+I+   K   +  A      M+  G   N  
Sbjct: 633 DKEKSCVLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+  LI+   + G    A  LC EM+   ++PN   YN  + +   EGD+E A  + S M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +  H+     +++IL KGLC+ G +++A  L +++ E     D  SY+ +I+ LCK  ++
Sbjct: 750 LQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L + M+ +GL PD++ Y   I      G  + A+ +Y NM +   +PN   Y ++
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 506 INGL 509
           ++G+
Sbjct: 869 LSGI 872


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 164/574 (28%), Positives = 275/574 (47%), Gaps = 56/574 (9%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEI----CKA-TPAVFD--ALVRACTQIGATEGAYD 167
           LL+ +L+ AN          L  SYE+    C+   P VF     + A  + G    A D
Sbjct: 226 LLLSSLVKANE---------LHKSYEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVD 276

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +  K++  G   ++  +NN +  L K        +    MV      +V T+ ++I  L 
Sbjct: 277 LFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLM 336

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K    EEA  +   M   G  PN V FN +I+  C+ GD+  AL++  +M  M G  + P
Sbjct: 337 KLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMA-MKG--MKP 393

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN--------------------VRTY 327
           N VT N ++ GFC+  ++E AE++   ++ +G+  N                    ++  
Sbjct: 394 NFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIV 453

Query: 328 ATLIDGYARGGSS---------------EEALRLCDEMVK-RGLMPNNVVYNSTIHWLFA 371
             L+ G  R   S                EA+ L  ++   +GL  N V  N+ +H L  
Sbjct: 454 TKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCE 513

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G++E    VL  M++K +  D  +Y+ L  G C+ G +++AFKL  +++++    D Y+
Sbjct: 514 RGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYT 573

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YN L+  L     +    +LL      G +P++ TY  L++GYCK   IE AV+ ++N+ 
Sbjct: 574 YNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLD 633

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIA 550
             + + + V+YN +I   C+  ++  A  L  A +  G+L    TY++LI+G    G++ 
Sbjct: 634 YEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVD 693

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EA  +F EMRN G+  N   Y  LI   CK G       ++  M  +GI P+ +TYT ++
Sbjct: 694 EAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMI 753

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             + K  + +E  EL ++M+ +G++PD  TYNA+
Sbjct: 754 DGYCKLGNMKEARELLNEMIRNGIAPDTVTYNAL 787



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 174/649 (26%), Positives = 298/649 (45%), Gaps = 59/649 (9%)

Query: 52  EQMAPSLTNSLVNRVVSEFRKS--PKLALEFYTWVGENNRFSHSLESSCAIVHLL----- 104
           + + P LT    +R+     ++  PK   EF+ +   +  F  ++ S C ++  L     
Sbjct: 74  KSILPHLTPHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLLRSLLADSF 133

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD----SYEICKATP----AVFDALVRA- 155
           V   RF  A L+ G++ + +S +   F + L +      E+ + +        D L+   
Sbjct: 134 VPRARFLLARLIDGHVPTWSSKTTTSFHDRLREIASSMLELNQGSDEQRLGELDLLLHIL 193

Query: 156 CTQIG--ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
           C+Q     +  A+D+      +G    +   N  LS LVK NE+ + ++++ ++   G  
Sbjct: 194 CSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVA 252

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V TF   I A CK  ++ +A+ L+ +M   G++PNVV +N +I+   + G  E AL+ 
Sbjct: 253 PDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALR- 311

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F+   V S   V P+ VT+  +I+G  KL   E A E+   M   G   N   +  LIDG
Sbjct: 312 FKDRMVRS--KVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDG 369

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNS----------------------------- 364
           Y R G   EALR+ DEM  +G+ PN V +N+                             
Sbjct: 370 YCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVN 429

Query: 365 ------TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
                  IH L        AL +++ ++  +I       + L  GLC+     +A +L  
Sbjct: 430 MDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWF 489

Query: 419 QVLE-EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           ++   + +  +  + N L++ LC+  N+    ++L  M+ +GL+ D I+Y TLI G CK 
Sbjct: 490 KLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKW 549

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TY 536
           G IE A ++ E M + E +P+   YN ++ GL     +D    LL  ++  G +  + TY
Sbjct: 550 GKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTY 609

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             L+ GY    +I +A   F  +    + ++ V YNILI   C+ G   +A +L   M  
Sbjct: 610 ALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKS 669

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            GI+P   TY++L+         +E  E+ ++M   G+ P+   Y A+I
Sbjct: 670 RGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALI 718



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 215/434 (49%), Gaps = 3/434 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+AL+    + G    A  V  ++ +KG   +   +N  L    + N++ +  ++   +
Sbjct: 362 VFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYI 421

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S G   N++  + VI+ L +      AL +  ++L   I  +      ++   C+    
Sbjct: 422 LSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGH 481

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A++L+ K+  + G  +  N+VT N +++G C+ G +E   E+   M++ G+  +  +Y
Sbjct: 482 SEAIELWFKLAAVKG--LAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISY 539

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI G  + G  EEA +L +EMV++   P+   YN  +  L   G ++    +L +  +
Sbjct: 540 NTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKE 599

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P+ +TY++L +G C+   ++ A K    +  E +   +  YNILI   C+  N+  
Sbjct: 600 YGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTE 659

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L  +M  RG++P   TY +LI G C  G ++ A +++E M+     PN+  Y ++I 
Sbjct: 660 AFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIG 719

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CK   +D   S+L      G+  + ITY  +I+GY   G + EA  + +EM   GIA 
Sbjct: 720 GHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAP 779

Query: 567 NKVGYNILINFLCK 580
           + V YN L    CK
Sbjct: 780 DTVTYNALQKGYCK 793



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 179/378 (47%), Gaps = 29/378 (7%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           V+   K +GHS +I  W                   +K     G   N  T N +++ LC
Sbjct: 472 VVGLCKCEGHSEAIELW-------------------FKLAAVKGLAANTVTSNALLHGLC 512

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           +   +EE   +  +ML+ G+  + + +N +I   C+ G +E A KL  +M         P
Sbjct: 513 ERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEM---VQQEFQP 569

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++ T+N ++ G   +G+++    + +   + G   NV TYA L++GY +    E+A++  
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFF 629

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             +    +  ++VVYN  I      G+V  A  +   M  + I P   TYS L  G+C  
Sbjct: 630 KNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCI 689

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V +A ++  ++  E ++ + + Y  LI   CK   +     +L  M   G+ P+ ITY
Sbjct: 690 GRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITY 749

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             +IDGYCK GN++ A ++   M +    P+ V YN++  G CK+  L      LQ+  +
Sbjct: 750 TIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVT---LQSDHK 806

Query: 528 ----IGLLDAITYNTLIN 541
               + L + ITYNTLI+
Sbjct: 807 SNIGLPLEEEITYNTLIH 824



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 211/473 (44%), Gaps = 44/473 (9%)

Query: 214 ENVNTFNLVIYALCKECKL---EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           + +   +L+++ LC + K      A  ++    K G++P +   N++++   +  +L  +
Sbjct: 181 QRLGELDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKS 240

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            ++F     ++   V P+  T    IN FCK GRV  A ++   M   G+  NV TY  +
Sbjct: 241 YEVFD----LACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNV 296

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDG  + G  EEALR  D MV+  + P+ V Y   I  L      E A  VL +M     
Sbjct: 297 IDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGF 356

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+   ++ L  G CR G + +A ++ +++  + M  +  ++N L+   C+SN +  A+Q
Sbjct: 357 APNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQ 416

Query: 451 LLSSMIVRGLIP--DIITY---------------------------------GTLIDGYC 475
           +L  ++  GL    D+ +Y                                   L+ G C
Sbjct: 417 VLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLC 476

Query: 476 KGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDA 533
           K      A++++  +  V+    N V  N++++GLC+  +++    +L+     G LLD 
Sbjct: 477 KCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDR 536

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           I+YNTLI G    GKI EAF +  EM       +   YN L+  L   G       L+  
Sbjct: 537 ISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHE 596

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              +G +P+  TY  L+  + K    E+ ++   ++    V   +  YN +I+
Sbjct: 597 AKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIA 649


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 255/502 (50%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ A +RA  +    +GA  ++ +++ +G   S   +N  +  L K   +    ++   M
Sbjct: 200 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 259

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G   +  T+  ++Y  C+  +LE AL + + M++ G  P+    + +I+E  +   +
Sbjct: 260 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 319

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A  L  K+G +    ++PN   +N +I+  CK  R + A+ +   M   G++ N  TY
Sbjct: 320 EEAFSLACKLGDLG---MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 376

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           A LI    + G  E+AL L D+M  +G+      YNS I+    +G ++ A  +LS M+ 
Sbjct: 377 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 436

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P   +YS L  GLCRNG +    +LH ++ E  +  + Y++  LIN  CK   +  
Sbjct: 437 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L   MI   +IP+ +T+  +I+GYC  GNI  A Q+Y+ M ++  KP+   Y S+I+
Sbjct: 497 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 556

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC  + +  A   +        +L+  +   L+ G+F  G+  E + ++ EM   G+ +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 616

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V + I++    K    +++  L + M   G+ PD + YT ++   SK  +  + +   
Sbjct: 617 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 676

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           D MV+ G SP+  T+  +I+ L
Sbjct: 677 DQMVVDGYSPNTVTHTVLINNL 698



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 249/548 (45%), Gaps = 20/548 (3%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++  L    RFDDA  L    M+   + P E                  +  L+ A  +
Sbjct: 343 ALIDKLCKNERFDDADRLFKE-MAGRGLEPNE----------------VTYAILIHALCK 385

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A  +  K++ KG  V+++ +N+ ++   K   + R   L   MV  G      +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++ +I  LC+   L   + L+  M + GI  N   F  +IN  C+   ++ A +LF KM 
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM- 504

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                +V+PN VT N +I G+C +G +  A ++   M++ G+  +  TY +LI G     
Sbjct: 505 --IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              +A     ++     + NN    + ++  F EG       +  +M  + +  D  +++
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           I+     +    +++  L  ++ E+ +  D   Y  +I+ L K  N+  A      M+V 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 682

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P+ +T+  LI+  CK G +  A  + + M      PN   YN  ++    +  ++ A
Sbjct: 683 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 742

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           K L  A  +  L   +++N LI G    GKI EA  + S++   G + + + Y+ +I+ L
Sbjct: 743 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 802

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G   +A EL   M+  G+ PD V Y   +   + +   ++ + ++ +M+ SGV P+ 
Sbjct: 803 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 862

Query: 639 QTYNAIIS 646
            TY A++S
Sbjct: 863 DTYRALLS 870



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 230/481 (47%), Gaps = 4/481 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +V+ +  +  L  LVK+ +      L+ +M+  G   +   +   I A C+   L+ A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L  RM   G+  + V +N+++   C+   ++ A+++     VM    V  + VT+  +
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV---KNVMVNIGVTADEVTYRTL 274

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           + GFC++  +E A  I + MI+ G   +    + +ID   +    EEA  L  ++   G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +PN   YN+ I  L      + A  +  +M  + + P+  TY+IL   LC+ G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L +++ ++ +    Y YN LIN  CK  +L  A+ LLS M+  GL P   +Y  LI G C
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           + G++   ++++  M +     N   + ++ING CKD  +D A  L        ++ + +
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 514

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T+N +I GY + G I +AF ++ +M  +G+  +   Y  LI+ LC      +A E +  +
Sbjct: 515 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 574

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
                + +  + T L+  F +     E   L D+M + GV  D  ++  I+   L +   
Sbjct: 575 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 634

Query: 655 E 655
           E
Sbjct: 635 E 635



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 185/408 (45%), Gaps = 36/408 (8%)

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +G+     +  N  T + I+    K+ +   A ++   M+++G+  +   Y   I  Y  
Sbjct: 151 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 210

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
             + + A  L   M   G+  + V YN  ++ L     V+ A+ V + M++  +  D  T
Sbjct: 211 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 270

Query: 397 YSILTKGLCR-----------------------------------NGCVKQAFKLHNQVL 421
           Y  L  G CR                                      V++AF L  ++ 
Sbjct: 271 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 330

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  MV + ++YN LI+ LCK+     A +L   M  RGL P+ +TY  LI   CK G IE
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLI 540
            A+ +++ M+    K  +  YNS+ING CK  SLD A+ LL    + GL   A +Y+ LI
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            G   NG ++    +  EM   GIA N   +  LIN  CK     +A  L   MI   +I
Sbjct: 451 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 510

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+ VT+  ++  +    +  +  +L+D MV  G+ PDN TY ++IS L
Sbjct: 511 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 1/342 (0%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + +GI  N  T + ++    +      A  L D+M++ G+  +  VY + I       ++
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +GA  ++  M  + +      Y++L  GLC+N  V++A ++ N ++   +  D  +Y  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +   C+   L  A ++   MI  G +P       +ID   K   +E A  +   +  +  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  YN++I+ LCK+   D A  L +     GL  + +TY  LI+     G I +A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F +MR+ GI V    YN LIN  CK G   +AR L+  M+  G+ P   +Y+ L+    
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 454

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +N      +ELH +M   G++ +N T+ A+I+    +K  ++
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 496



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 189/424 (44%), Gaps = 6/424 (1%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
            N   S  +E    +    + W  +    L+ G              + ++DS  I    
Sbjct: 455 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI--PN 512

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
              F+ ++     +G    A+ +  ++   G     + + + +S L   + + +  +   
Sbjct: 513 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 572

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           ++ +   V N  +   ++Y   +E +  E   L+  M   G+  ++V F +I+  A +  
Sbjct: 573 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 632

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D E +  LFR+M       V P+ + + C+I+   K   +  A      M+  G   N  
Sbjct: 633 DKEKSCVLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 689

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+  LI+   + G    A  LC EM+   ++PN   YN  + +   EGD+E A  + S M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +  H+     +++IL KGLC+ G +++A  L +++ E     D  SY+ +I+ LCK  ++
Sbjct: 750 LQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L + M+ +GL PD++ Y   I      G  + A+ +Y NM +   +PN   Y ++
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 506 INGL 509
           ++G+
Sbjct: 869 LSGI 872


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/611 (24%), Positives = 287/611 (46%), Gaps = 33/611 (5%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
           A ++T  +  RV+ +  + P +A  F+ W G    F H+  +   +++  V  +R ++A 
Sbjct: 38  ASTVTPEVAGRVLQQV-EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAH 96

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
            L+            E LE L    EI      ++  ++    + G  + A++++ ++K 
Sbjct: 97  RLLK-----------EELEPLCFPNEI------MYTTVINGFCKAGQVDQAFELLDEMKE 139

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM-VSCGYVENVNTFNLVIYALCKECKLE 233
           +G  + +   +  +  L +   I    + +K M   C    NV T+N V+  LCK  +++
Sbjct: 140 RGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS--PNVITYNTVVNGLCKANRID 197

Query: 234 EALSLYYRMLKS-----GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           EAL L+  M K      G  P+V+ ++ +I+  C+   ++ A + F++M  +      PN
Sbjct: 198 EALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG---CAPN 254

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            VT++ +I+G CK+ R     E+   M + G   N+  +  ++    +    E+A +  +
Sbjct: 255 VVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 314

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            ++K G  PN V YN  +H L   G V+ A  +L +M++  + PD  TYS +  G C+ G
Sbjct: 315 RLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 374

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + +A  +  +++    +    ++  L++   +      A ++   M+  G IP + TY 
Sbjct: 375 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 434

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            L+D  C   ++E A+++Y  MK+ +++P+   Y  +I  LC+   +D AK  L   +  
Sbjct: 435 VLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEAD 494

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
            ++ +    + L+      G++ EA ++   +  VG       + IL+  L     ++ A
Sbjct: 495 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAA 554

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            +L++     G + D  TY+  V    K   P+E +E+ + MVL GV PD  TY A++  
Sbjct: 555 SKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRS 611

Query: 648 LLGEKSAEDQV 658
           L G    E  +
Sbjct: 612 LCGLDRVESAI 622



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/334 (20%), Positives = 137/334 (41%), Gaps = 43/334 (12%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVK---GHSVSIHAWNNFLSHLVKLNEI 197
           K TP V  + +++    + G  + A DV  ++ V     H V+     +  S   K  E 
Sbjct: 355 KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA 414

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
              ++++++MV+ G++  + T+N+++  +C    +E AL +Y++M +    P+   +  +
Sbjct: 415 ---FRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPL 471

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA--------- 308
           I   C+   ++ A +    + VM  D+V+PN    + ++   CK G V+ A         
Sbjct: 472 IQCLCRARRVDEAKEF---LDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528

Query: 309 -----------------------EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
                                  E     +   G   +  TY+  +    + G  +EA+ 
Sbjct: 529 VGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVE 588

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           + ++MV +G+ P+   Y + +  L     VE A+     M  +   P   TY++L    C
Sbjct: 589 VIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEAC 648

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                 +AF++   ++       A +   L + L
Sbjct: 649 SADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCL 682


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 259/523 (49%), Gaps = 13/523 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLK-VKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           C     V   +++A  +   +  A D  Q ++ + G    + ++N  L+  V+LNE  R 
Sbjct: 76  CPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA 135

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
               +   S     N+ T+N++I   CK+ ++E+A+SL   M    + P+V  +  +IN 
Sbjct: 136 ESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             +VGDL  ALK+F +M V     V+ +   +N +I+GF K G  +  +EI   ++K   
Sbjct: 196 MVKVGDLLGALKVFDEMSVR---GVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVK--- 249

Query: 321 DC----NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           DC    NV TY  +I+G  + G  +E+L + + M K     +   Y+S IH L   G+++
Sbjct: 250 DCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNID 309

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
           GA+ V  ++++  +  D  T++ +  G CR G +K++F+L   V+ +       SYNILI
Sbjct: 310 GAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW-MVMGKENCQTVVSYNILI 368

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             L ++  +  A  +   +  +G  P+  TYG LI G CK G +  A+++++  +    K
Sbjct: 369 KGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGK 428

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
            +   Y+S+++GLCK+  +D A S++ Q  +R   LD    N LING+    K+ +A   
Sbjct: 429 LDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINF 488

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F EM   G +   V YN LI  LCK   + +A   +K M+     PD +T + L+    +
Sbjct: 489 FREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQ 548

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
               E  + L    +  G  PD   YN ++  L      ED +
Sbjct: 549 EKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDAL 591



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 252/504 (50%), Gaps = 8/504 (1%)

Query: 146 PAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF    L+    ++G   GA  V  ++ V+G    +  +N  +    K  +  +  ++
Sbjct: 184 PDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEI 243

Query: 204 YKEMV-SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +V  C    NV T+N++I  LCK  + +E+L ++ RM K+    ++  ++ +I+  C
Sbjct: 244 WERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLC 303

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+++ A+++++++      S++ ++VTHN ++NGFC+ G+++ + E+   M K     
Sbjct: 304 EAGNIDGAVRVYKEI---VESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ- 359

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V +Y  LI G    G  EEA+ + + + K+G  P +  Y   IH L   G +  AL + 
Sbjct: 360 TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIF 419

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +  D     D + YS +  GLC+ G + +A  + NQ+ +     D +  N LIN   ++
Sbjct: 420 KEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRA 479

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           + L  A      M  +G  P I++Y TLI G CK      A    + M + E KP+++  
Sbjct: 480 SKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITC 539

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRN 561
           + +++GLC++  ++ A +L Q +   G    IT YN L++G     K+ +A  ++S M+ 
Sbjct: 540 SLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKR 599

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
                N V  N L+  L K   Y++A E+   ++  G+ PD ++Y   +          +
Sbjct: 600 STCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISD 659

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
            IE  +D +  G+ P   T+N ++
Sbjct: 660 AIEFLNDALNRGILPTAVTWNILV 683



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 3/221 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K  P V + L+    +    E A +  ++++ KG S +I ++N  +  L K       + 
Sbjct: 463 KLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYS 522

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
             KEM+   +  ++ T +L++  LC+E K+E AL+L+ + L  G  P++  +N++++  C
Sbjct: 523 FVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLC 582

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            V  LE AL+L+     M   + +PN VT N ++ G  K+   E A EI   ++K G+  
Sbjct: 583 SVCKLEDALQLYSH---MKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHP 639

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           ++ +Y   I G        +A+   ++ + RG++P  V +N
Sbjct: 640 DIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWN 680



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 134/270 (49%), Gaps = 11/270 (4%)

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
           G LD+Y         + ++V    + G  + A  ++ ++  +G+ +  H  N  ++  V+
Sbjct: 427 GKLDAY--------AYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVR 478

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
            +++      ++EM   G    + ++N +I  LCK  +  EA S    ML+    P+++ 
Sbjct: 479 ASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMIT 538

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            +++++  CQ   +E AL L+++          P+   +N +++G C + ++E A ++  
Sbjct: 539 CSLLMDGLCQEKKIEMALNLWQQA---LDKGFKPDITMYNILMHGLCSVCKLEDALQLYS 595

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M ++    N+ T  TL++G  +    E+A  + D ++K GL P+ + YN TI  L +  
Sbjct: 596 HMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCS 655

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            +  A+  L+D +++ I P   T++IL + 
Sbjct: 656 RISDAIEFLNDALNRGILPTAVTWNILVRA 685


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 255/502 (50%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ A +RA  +    +GA  ++ +++ +G   S   +N  +  L K   +    ++   M
Sbjct: 223 VYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVM 282

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G   +  T+  ++Y  C+  +LE AL + + M++ G  P+    + +I+E  +   +
Sbjct: 283 VNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELV 342

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A  L  K+G +    ++PN   +N +I+  CK  R + A+ +   M   G++ N  TY
Sbjct: 343 EEAFSLACKLGDLG---MVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY 399

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           A LI    + G  E+AL L D+M  +G+      YNS I+    +G ++ A  +LS M+ 
Sbjct: 400 AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVK 459

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P   +YS L  GLCRNG +    +LH ++ E  +  + Y++  LIN  CK   +  
Sbjct: 460 EGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 519

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L   MI   +IP+ +T+  +I+GYC  GNI  A Q+Y+ M ++  KP+   Y S+I+
Sbjct: 520 AARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLIS 579

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC  + +  A   +        +L+  +   L+ G+F  G+  E + ++ EM   G+ +
Sbjct: 580 GLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL 639

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V + I++    K    +++  L + M   G+ PD + YT ++   SK  +  + +   
Sbjct: 640 DLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCW 699

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           D MV+ G SP+  T+  +I+ L
Sbjct: 700 DQMVVDGYSPNTVTHTVLINNL 721



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 251/548 (45%), Gaps = 20/548 (3%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++  L    RFDDA  L    M+   + P E       +Y I          L+ A  +
Sbjct: 366 ALIDKLCKNERFDDADRLFKE-MAGRGLEPNEV------TYAI----------LIHALCK 408

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A  +  K++ KG  V+++ +N+ ++   K   + R   L   MV  G      +
Sbjct: 409 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 468

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++ +I  LC+   L   + L+  M + GI  N   F  +IN  C+   ++ A +LF KM 
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM- 527

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                +V+PN VT N +I G+C +G +  A ++   M++ G+  +  TY +LI G     
Sbjct: 528 --IDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              +A     ++     + NN    + ++  F EG       +  +M  + +  D  +++
Sbjct: 586 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 645

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           I+     +    +++  L  ++ E+ +  D   Y  +I+ L K  N+  A      M+V 
Sbjct: 646 IIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVD 705

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  P+ +T+  LI+  CK G +  A  + + M      PN   YN  ++    +  ++ A
Sbjct: 706 GYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKA 765

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           K L  A  +  L   +++N LI G    GKI EA  + S++   G + + + Y+ +I+ L
Sbjct: 766 KDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHEL 825

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G   +A EL   M+  G+ PD V Y   +   + +   ++ + ++ +M+ SGV P+ 
Sbjct: 826 CKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNW 885

Query: 639 QTYNAIIS 646
            TY A++S
Sbjct: 886 DTYRALLS 893



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 230/481 (47%), Gaps = 4/481 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +V+ +  +  L  LVK+ +      L+ +M+  G   +   +   I A C+   L+ A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L  RM   G+  + V +N+++   C+   ++ A+++     VM    V  + VT+  +
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEV---KNVMVNIGVTADEVTYRTL 297

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           + GFC++  +E A  I + MI+ G   +    + +ID   +    EEA  L  ++   G+
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +PN   YN+ I  L      + A  +  +M  + + P+  TY+IL   LC+ G ++ A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L +++ ++ +    Y YN LIN  CK  +L  A+ LLS M+  GL P   +Y  LI G C
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 477

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           + G++   ++++  M +     N   + ++ING CKD  +D A  L        ++ + +
Sbjct: 478 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEV 537

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T+N +I GY + G I +AF ++ +M  +G+  +   Y  LI+ LC      +A E +  +
Sbjct: 538 TFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADL 597

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
                + +  + T L+  F +     E   L D+M + GV  D  ++  I+   L +   
Sbjct: 598 ENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDK 657

Query: 655 E 655
           E
Sbjct: 658 E 658



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 185/408 (45%), Gaps = 36/408 (8%)

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +G+     +  N  T + I+    K+ +   A ++   M+++G+  +   Y   I  Y  
Sbjct: 174 LGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCE 233

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
             + + A  L   M   G+  + V YN  ++ L     V+ A+ V + M++  +  D  T
Sbjct: 234 SRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVT 293

Query: 397 YSILTKGLCR-----------------------------------NGCVKQAFKLHNQVL 421
           Y  L  G CR                                      V++AF L  ++ 
Sbjct: 294 YRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLG 353

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +  MV + ++YN LI+ LCK+     A +L   M  RGL P+ +TY  LI   CK G IE
Sbjct: 354 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 413

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLI 540
            A+ +++ M+    K  +  YNS+ING CK  SLD A+ LL    + GL   A +Y+ LI
Sbjct: 414 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 473

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            G   NG ++    +  EM   GIA N   +  LIN  CK     +A  L   MI   +I
Sbjct: 474 AGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI 533

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+ VT+  ++  +    +  +  +L+D MV  G+ PDN TY ++IS L
Sbjct: 534 PNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 1/342 (0%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + +GI  N  T + ++    +      A  L D+M++ G+  +  VY + I       ++
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +GA  ++  M  + +      Y++L  GLC+N  V++A ++ N ++   +  D  +Y  L
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +   C+   L  A ++   MI  G +P       +ID   K   +E A  +   +  +  
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  YN++I+ LCK+   D A  L +     GL  + +TY  LI+     G I +A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F +MR+ GI V    YN LIN  CK G   +AR L+  M+  G+ P   +Y+ L+    
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLC 477

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +N      +ELH +M   G++ +N T+ A+I+    +K  ++
Sbjct: 478 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDE 519



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 189/424 (44%), Gaps = 6/424 (1%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
            N   S  +E    +    + W  +    L+ G              + ++DS  I    
Sbjct: 478 RNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVI--PN 535

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
              F+ ++     +G    A+ +  ++   G     + + + +S L   + + +  +   
Sbjct: 536 EVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVA 595

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           ++ +   V N  +   ++Y   +E +  E   L+  M   G+  ++V F +I+  A +  
Sbjct: 596 DLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQH 655

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D E +  LFR+M       V P+ + + C+I+   K   +  A      M+  G   N  
Sbjct: 656 DKEKSCVLFREM---KEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTV 712

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+  LI+   + G    A  LC EM+   ++PN   YN  + +   EGD+E A  + S M
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +  H+     +++IL KGLC+ G +++A  L +++ E     D  SY+ +I+ LCK  ++
Sbjct: 773 LQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +L + M+ +GL PD++ Y   I      G  + A+ +Y NM +   +PN   Y ++
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891

Query: 506 INGL 509
           ++G+
Sbjct: 892 LSGI 895


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 253/485 (52%), Gaps = 8/485 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++++++       + ++N  +    +  E+ +  +L  EM   G   ++ T+ ++I 
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A CK  K++EA+     M   G+  ++V +  +I   C  G+L+    LF ++ +  GDS
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDS 279

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P ++T+N +I GFCKLG+++ A EI   MI+ G+  NV TY  LIDG    G ++EAL
Sbjct: 280 --PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L + M+++   PN V YN  I+ L  +G V  A+ ++  M  +   PD+ TY+IL  GL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 405 CRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           C  G + +A KL   +L++  +   D  SYN LI+ LCK N L  A  +   ++ +    
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D +T   L++   K G++  A+++++ +   +   N   Y ++I+G CK   L+ AK LL
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 523 QASQRIGLLD--AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
               R+  L      YN L++     G + +A+ +F EM+      + V +NI+I+   K
Sbjct: 518 -CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G  + A  L+  M   G+ PD  TY+ L+ RF K    +E I   D MV SG  PD   
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636

Query: 641 YNAII 645
            ++++
Sbjct: 637 CDSVL 641



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 251/525 (47%), Gaps = 41/525 (7%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+   +K+      ++  + +  L   V++ + G  + +   M+  G+  NV   N++
Sbjct: 89  ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +  LC+  +  +A+SL   M ++ + P+V  +N +I   C+  +LE AL+L  +M    G
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM---KG 205

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
                + VT   +I+ FCK G+++ A      M   G++ ++  Y +LI G+   G  + 
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
              L DE+++RG  P  + YN+ I      G ++ A  +   MI++ + P+ +TY+ L  
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLC  G  K+A +L N ++E+    +A +YNI+IN LCK   +A A +++  M  R   P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIINGLCKDASLDAAKS 520
           D ITY  L+ G C  G+++ A ++   M K      P+++ YN++I+GLCK+  L  A  
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 521 LLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN------------ 567
           +     +++G  D +T N L+N     G + +A  ++ ++ +  I  N            
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 568 KVG-----------------------YNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
           K G                       YN L++ LCK G   QA  L + M      PD V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++  ++    K    +    L   M  +G+SPD  TY+ +I+  L
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 157/627 (25%), Positives = 289/627 (46%), Gaps = 46/627 (7%)

Query: 16  LSRAFHVGKQFANP----------STEDIVFRAICVNLR---QRKWKILEQMAPSLT--- 59
           L R  HV ++  NP          S  +   R++C +     +    + +Q   S +   
Sbjct: 13  LRRDEHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLA 72

Query: 60  ---NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR----FDD 112
              N+L+ ++V    ++ +LA  FY  + E + F + +  S  ++   V  R+    F  
Sbjct: 73  FAGNNLMAKLVRS--RNHELAFSFYRKMLETDTFINFVSLS-GLLECYVQMRKTGFAFGV 129

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT------------PAVF--DALVRACTQ 158
             L++    + N  +    L+GL  + E  KA             P VF  + ++R   +
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
               E A ++  ++K  G S S+  W   +    K  ++       KEM   G   ++  
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +  +I   C   +L+   +L+  +L+ G  P  + +N +I   C++G L+ A ++F    
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE--- 306

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M    V PN  T+  +I+G C +G+ + A ++   MI+   + N  TY  +I+   + G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI--DKHICPDHFT 396
              +A+ + + M KR   P+N+ YN  +  L A+GD++ A  +L  M+    +  PD  +
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ L  GLC+   + QA  +++ ++E+   GD  + NIL+N   K+ ++  A +L   + 
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
              ++ +  TY  +IDG+CK G +  A  +   M+  E +P++  YN +++ LCK+ SLD
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546

Query: 517 AAKSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  L +  QR     D +++N +I+G    G I  A ++   M   G++ +   Y+ LI
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPD 602
           N   K G   +A      M+  G  PD
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPD 633



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 227/464 (48%), Gaps = 6/464 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   +  L+ A  + G  + A   ++++K  G    +  + + +       E+ R  
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ E++  G      T+N +I   CK  +L+EA  ++  M++ G+ PNV  +  +I+  
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C VG  + AL+L   + +M      PN+VT+N IIN  CK G V  A EI   M K    
Sbjct: 328 CGVGKTKEALQL---LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGAL 379
            +  TY  L+ G    G  +EA +L   M+K      P+ + YN+ IH L  E  +  AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   +++K    D  T +IL     + G V +A +L  Q+ +  +V ++ +Y  +I+  
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+  L  AK LL  M V  L P +  Y  L+   CK G+++ A +++E M++    P++
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V +N +I+G  K   + +A+SLL    R GL  D  TY+ LIN +   G + EA + F +
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           M + G   +    + ++ +    G   +  EL+K ++   I+ D
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 240/496 (48%), Gaps = 7/496 (1%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A  V Q+    G S++  A NN ++ LV+       +  Y++M+      N  + + +
Sbjct: 55  KNAVSVFQQAVDSGSSLAF-AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGL 113

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +    +  K   A  +   MLK G   NV   N+++   C+  +   A+ L R+M     
Sbjct: 114 LECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM---RR 170

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           +S++P+  ++N +I GFC+   +E A E+   M  +G   ++ T+  LID + + G  +E
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+    EM   GL  + VVY S I      G+++    +  +++++   P   TY+ L +
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ G +K+A ++   ++E  +  + Y+Y  LI+ LC       A QLL+ MI +   P
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + +TY  +I+  CK G +  AV++ E MKK   +P+ + YN ++ GLC    LD A  LL
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410

Query: 523 QASQRIGLL---DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
               +       D I+YN LI+G     ++ +A  ++  +     A ++V  NIL+N   
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A EL K +    I+ +  TYT ++  F K         L   M +S + P   
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530

Query: 640 TYNAIISPLLGEKSAE 655
            YN ++S L  E S +
Sbjct: 531 DYNCLLSSLCKEGSLD 546



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 1/247 (0%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF +   +L+     + Y++NIL+  LC++     A  LL  M    L+PD+ +Y T+I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G+C+G  +E A+++   MK      +LV +  +I+  CK   +D A   L+  + +GL  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D + Y +LI G+   G++    A+F E+   G +   + YN LI   CK G  ++A E+ 
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + MI  G+ P+  TYT L+         +E ++L + M+     P+  TYN II+ L  +
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365

Query: 652 KSAEDQV 658
               D V
Sbjct: 366 GLVADAV 372



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 159/330 (48%), Gaps = 5/330 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL-YKE 206
            ++ ++    + G    A ++++ +K +        +N  L  L    ++    KL Y  
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 207 MVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +    Y + +V ++N +I+ LCKE +L +AL +Y  +++     + V  N+++N   + G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D+  A++L++++   S   ++ NS T+  +I+GFCK G +  A+ +   M  + +  +V 
Sbjct: 474 DVNKAMELWKQI---SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  L+    + GS ++A RL +EM +    P+ V +N  I      GD++ A  +L  M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD FTYS L     + G + +A    +++++     DA+  + ++ Y       
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
               +L+  ++ + ++ D     T++D  C
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMC 680


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 253/522 (48%), Gaps = 40/522 (7%)

Query: 167 DVIQKLKVKGHS---VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
           D IQ ++  G +   +S   +N  L  L + +      ++Y ++V  G + +  T+N +I
Sbjct: 16  DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS-- 281
            + CKE  L  A   +  +L+ G+ P     N ++   C+ G+L  A  LF  M +M   
Sbjct: 76  KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 135

Query: 282 ------------------------------GDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
                                          D   PN      +I+G CK GRV  A  +
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
             AM + G+  +V TY  +I GY++ G   +AL++ + M K G  P++  YN+ I+ L  
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL-C 254

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +   E A  +L++ + +   P   T++ L  G C       A ++ N+++      D   
Sbjct: 255 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +  LIN L K + L  AK+LL+ +   GL+P++ITY ++IDGYCK G ++ A++V + M+
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +   +PN   YNS++ GL KD  L  A +LL   Q+ G++ + ITY TL+ G        
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            AF +F  M   G+  ++  Y +L + LCK G   +A E    ++  G+    V YTTL+
Sbjct: 435 NAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLI 491

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
             FSK  + +    L + M+  G +PD+ TY+ ++  L  +K
Sbjct: 492 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK 533



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 156/621 (25%), Positives = 249/621 (40%), Gaps = 119/621 (19%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L++          A  +   +K  G S ++ A+   +S L K   +G   
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193

Query: 202 KLYKEMVSCGYVENVN-----------------------------------TFNLVIYAL 226
            L+  M   G V +V                                    T+N +IY L
Sbjct: 194 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 253

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
           C + K EEA  L    +K G  P VV F  +IN  C     + AL++  KM         
Sbjct: 254 CDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 312

Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
                                    +S + ++PN +T+  II+G+CK G+V+ A E+   
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G   N  TY +L+ G  +     +A+ L  +M K G++PN + Y + +     E D
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK------------------- 415
            + A  +   M    + PD   Y++LT  LC+ G  ++A+                    
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 492

Query: 416 -------------LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
                        L  ++++E    D+Y+Y++L++ LCK   L  A  +L  M +RG+  
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            I  Y  LID   + G  + A ++Y  M     KP+   Y   IN  CK+  L+ A+ L+
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              +R G+  D +TYN LI+G    G I  AF+    M       N   Y +L+  L K 
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK- 671

Query: 582 GCYQQAR-----------------ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           G     R                 +L++ M+ HG+ P   TY++L+  F K    EE   
Sbjct: 672 GNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACL 731

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           L D M   G+SP+   Y  +I
Sbjct: 732 LLDHMCGKGLSPNEDIYTLLI 752



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 251/558 (44%), Gaps = 40/558 (7%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           +FDDAL +   +MS+                  CK    VF  L+ +  +    + A ++
Sbjct: 292 KFDDALRMKNKMMSSK-----------------CKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + ++   G   ++  + + +    K  ++    ++ K M   G   N  T+N ++Y L K
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + KL +A++L  +M K GI PNV+ +  ++   C   D + A +LF    +M  + + P+
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE---MMEQNGLKPD 451

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              +  + +  CK GR   AEE    +++ G+      Y TLIDG+++ G+++ A  L +
Sbjct: 452 EHAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 508

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M+  G  P++  Y+  +H L  +  +  AL +L  M  + I    F Y+IL   + R G
Sbjct: 509 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 568

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A +++N++        A +Y + IN  CK   L  A+ L+  M   G+ PD++TY 
Sbjct: 569 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 628

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK---------DAS----- 514
            LIDG    G I+ A    + M     +PN   Y  ++  L K         D S     
Sbjct: 629 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 688

Query: 515 --LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    LL+   + GL   + TY++LI G+   G++ EA  +   M   G++ N+  Y
Sbjct: 689 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 748

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
            +LI   C    +++A   + +M   G  P   +Y  LV         E+V  L  D++ 
Sbjct: 749 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 808

Query: 632 SGVSPDNQTYNAIISPLL 649
            G + D   +  +   LL
Sbjct: 809 LGYNHDEVAWKILNDGLL 826



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 254/542 (46%), Gaps = 19/542 (3%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVK 175
           G+L +A+    L  LEG L+        P  F  +ALV    + G    A  +   + + 
Sbjct: 82  GDLTTAHRYFRL-LLEGGLE--------PETFTCNALVLGYCRTGELRKACWLFLMMPLM 132

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   + +++   +  L     + +   L+  M   G   NV  F  +I  LCK  ++ +A
Sbjct: 133 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 192

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L+  M ++G+ P+V+ +N +I    ++G +  ALK+     +M  +   P+  T+N +
Sbjct: 193 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKE---LMEKNGCHPDDWTYNTL 249

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I G C   + E AEE+    +K G    V T+  LI+GY      ++ALR+ ++M+    
Sbjct: 250 IYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKC 308

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             +  V+   I+ L  +  ++ A  +L+++    + P+  TY+ +  G C++G V  A +
Sbjct: 309 KLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALE 368

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   +  +    +A++YN L+  L K   L  A  LL+ M   G+IP++ITY TL+ G C
Sbjct: 369 VLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 428

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
              + + A +++E M++   KP+   Y  + + LCK    + A S +    R G+ L  +
Sbjct: 429 DEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKV 485

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y TLI+G+   G    A  +   M + G   +   Y++L++ LCK     +A  ++  M
Sbjct: 486 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 545

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
            L GI      YT L+    +    +    ++++M  SG  P   TY   I+    E   
Sbjct: 546 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 605

Query: 655 ED 656
           ED
Sbjct: 606 ED 607



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 197/456 (43%), Gaps = 54/456 (11%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           FD+A  L   +M  N + P E             A   + DAL +A    G  E AY  I
Sbjct: 433 FDNAFRLF-EMMEQNGLKPDE------------HAYAVLTDALCKA----GRAEEAYSFI 475

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            +   KG +++   +   +    K         L + M+  G   +  T++++++ALCK+
Sbjct: 476 VR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 532

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            +L EAL +  +M   GI   +  + ++I+E  + G  + A +++ +M   SG    P++
Sbjct: 533 KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM-TSSGHK--PSA 589

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+   IN +CK GR+E AE++   M + G+  +V TY  LIDG    G  + A      
Sbjct: 590 TTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKR 649

Query: 350 MVKRGLMPN--------------NVVYNSTIH----WLFAEGDVEGALFVLSDMIDKHIC 391
           MV     PN              N+ Y  ++     W   E D+   L  L  M+   + 
Sbjct: 650 MVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQL--LERMVKHGLN 707

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS-----YNILINYLCKSNNLA 446
           P   TYS L  G C+ G +++A      +L +HM G   S     Y +LI   C +    
Sbjct: 708 PTVTTYSSLIAGFCKAGRLEEAC-----LLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 762

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A   +S M   G  P + +Y  L+ G C  G+ E    ++ ++ ++    + V +  + 
Sbjct: 763 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILN 822

Query: 507 NGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLIN 541
           +GL K   +D    +L    +R   + + TY  + N
Sbjct: 823 DGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTN 858


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 258/544 (47%), Gaps = 43/544 (7%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           T  + DA + A  ++     A  ++  L+ + G   S+ A N  LS L +         L
Sbjct: 134 TSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASL 193

Query: 204 --YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             ++ ++      N  TFNL+++  C +  L +AL+    M   G+ P+ V +N ++N  
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L  A  L  +M     D + P   T+N +++ F +LG ++ A ++  +M   G +
Sbjct: 254 CRKGMLGEARALLARM---KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFE 310

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALF 380
            ++RTY  L  G  + G  +EA RL DEM +    +P+ V YN+ +   F       AL 
Sbjct: 311 PDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALR 370

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L +M DK + P   T++I+ K LC+ G +++A     ++ EE +  D  +YN LI+  C
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430

Query: 441 KSNNLAAA-----------------------------------KQLLSSMIVRGLIPDII 465
           K+ N+A A                                   ++LL S   RG +PD +
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEV 490

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           +YGT++  Y K  N E A+++++ M + +  P++  YN++I GLC+   L  A   L   
Sbjct: 491 SYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEL 550

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              GL+ D  TYN +I+ Y   G +  AF   ++M       + V  N L+N LC  G  
Sbjct: 551 VEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKL 610

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +A +L +  +  G   D +TY TL+    K    +  +   DDM + G+ PD  TYN +
Sbjct: 611 DKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVV 670

Query: 645 ISPL 648
           +S L
Sbjct: 671 LSAL 674



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 215/415 (51%), Gaps = 13/415 (3%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L +EM   G    + T N+V+ +LCKE KLEEAL    ++ + G+ P+V+ +N +I+  
Sbjct: 370 RLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAY 429

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G++    K F  M  M G  +  ++ T N ++   CK+ R E AEE+ ++  + G  
Sbjct: 430 CKAGNVA---KAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  +Y T++  Y +  + E ALRL D+M++R L+P+   YN+ I  L     ++ A+  
Sbjct: 487 PDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDK 546

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L+++++K + PD  TY+I+    C+ G ++ AF+ HN+++E     D  + N L+N LC 
Sbjct: 547 LNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A +L  S + +G   D+ITY TLI   CK G+++ A+  +++M+    +P+   
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YN +++ L +    + A ++L      G L       L+     +    EA     E + 
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSAD----EADVKEHEGKP 722

Query: 562 VGIAVNKVGYNIL------INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
              +  K   N L      +N LC  G  ++A+ ++  M+  G+  D  TY TL+
Sbjct: 723 EAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLM 777



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 184/399 (46%), Gaps = 40/399 (10%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDGYARGGSS--EEA 343
           P S   +  ++ + +L     A ++ +++ +  G+  +++    ++   +R  S+  + +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           L +   +++  L PN+  +N  +H   ++G +  AL  LS M    + PD  TY+ L   
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            CR G + +A  L  ++  + +     +YN L++   +   +  A +++ SM   G  PD
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEK---------------------------- 495
           + TY  L  G C+ G ++ A ++ + M+++                              
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 496 --------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
                   KP LV +N ++  LCK+  L+ A   L+     GL  D ITYNTLI+ Y   
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G +A+AF +  EM   G+ ++    N ++  LCK   Y+ A EL+      G +PD V+Y
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            T++  + K  +PE  + L D M+   + P   TYN +I
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 155/309 (50%), Gaps = 4/309 (1%)

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDV--EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           +RG+ P+    N+ +  L        + +L V   +I+  + P+H+T+++L    C  G 
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A    + +    +  DA +YN L+N  C+   L  A+ LL+ M   G+ P   TY T
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI- 528
           L+  + + G I+ A +V E+M     +P+L  YN +  GLC+   +D A  L    +R+ 
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343

Query: 529 -GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
             L D +TYNTL++  F     ++A  +  EMR+ G+    V +NI++  LCK G  ++A
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
              ++ +   G+ PD +TY TL+  + K  +  +   L D+MV  G+  D  T N ++  
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 648 LLGEKSAED 656
           L   K  ED
Sbjct: 464 LCKMKRYED 472



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 131/297 (44%), Gaps = 37/297 (12%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  +  L ++  +        E+V  G V +  T+N++I+A CKE  LE A   +
Sbjct: 523 SISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFH 582

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M+++   P+VV  N ++N  C  G L+ ALKLF    V  G  V  + +T+N +I   
Sbjct: 583 NKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESW-VEKGKKV--DVITYNTLIQSM 639

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G V+ A      M   G+  +  TY  ++   +  G SEEA  +  ++   G +  +
Sbjct: 640 CKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQS 699

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
                     FA   ++ +    +D+ +    P+                 + + K  + 
Sbjct: 700 ----------FACPLLKPSSADEADVKEHEGKPE----------------AESSEKAQDN 733

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            LE +M          +N LC    L  AK +L  M+ +G+  D  TY TL++G  K
Sbjct: 734 ALETYMER--------LNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 114/260 (43%), Gaps = 39/260 (15%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + ++ L++   ++   + A D + +L  KG       +N  +    K  ++   ++ + +
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNK 584

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV   +  +V T N ++  LC   KL++AL L+   ++ G   +V+ +N +I   C+VGD
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG------- 319
           ++ AL  F  M V     + P++ T+N +++   + GR E A  + + +  +G       
Sbjct: 645 VDTALHFFDDMEV---KGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701

Query: 320 -----------------------------IDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
                                         D  + TY   ++G   GG  +EA  + DEM
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761

Query: 351 VKRGLMPNNVVYNSTIHWLF 370
           +++G+  ++  Y + +  L 
Sbjct: 762 MQKGMPVDSSTYITLMEGLI 781


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 251/506 (49%), Gaps = 15/506 (2%)

Query: 143 KATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           K+   V D LV A C  + A     +V  ++  KG   +++ +   +  L  +NE+    
Sbjct: 174 KSYNVVLDILVSANCPSVAA-----NVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L ++M   G V N   +  +I+AL K  ++ EAL L   M   G  P+V  FN +I   
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++  +    KL  +M +  G +  PN +T+  ++NG C++G+V+ A+     ++     
Sbjct: 289 CRLNRIHEGAKLVDRM-LFRGFT--PNDITYGVLMNGLCRVGKVDEAQ----VLLNKVPT 341

Query: 322 CNVRTYATLIDGYARGGSSEEA-LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
            N   +  LI+GY + G  +EA   L D+M+K G  P+   +N+ IH L  +G +  A+ 
Sbjct: 342 PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVD 401

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +++DM      P+  TY+ L  G C+   +++A  + N++  +    +   YN+L+  LC
Sbjct: 402 MVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALC 461

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  +L  M  +G  PDI T+ TLI G CK    E A+ +Y +M       N V
Sbjct: 462 KNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTV 521

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN++I+   +  ++  A  L+      G  LD ITYN LI  +   G   +A  +F EM
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEM 581

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               +  + +  N+LIN LC+ G    A EL++ MI  G+ PD VTY +L+    K  + 
Sbjct: 582 VRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNI 641

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAII 645
            E   L + +   G+ PD  TYN +I
Sbjct: 642 REAFNLFNKLQAEGIQPDAITYNTLI 667



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 251/520 (48%), Gaps = 30/520 (5%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   F  +++A   +   + A  +++ +   G   +   +   +  L K + +    KL 
Sbjct: 207 TVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLL 266

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           +EM   G + +V+TFN VIY LC+  ++ E   L  RML  G  PN + + +++N  C+V
Sbjct: 267 EEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRV 326

Query: 265 GDLEFALKLFRKMGV-----------------------------MSGDSVLPNSVTHNCI 295
           G ++ A  L  K+                               M  +   P+  T N +
Sbjct: 327 GKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTL 386

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK G +  A ++   M   G   N+ TY TL+DG+ +    EEA  + +EM  +G 
Sbjct: 387 IHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGF 446

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             N + YN  +  L   G V  AL +L +M DK   PD FT++ L  GLC+    + A  
Sbjct: 447 ELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALA 506

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L+  +L + ++ +  +YN LI+   +   +  A +L++ M+ RG   D ITY  LI  +C
Sbjct: 507 LYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFC 566

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           K G  E A+ +++ M + +  P+ +  N +INGLC+   +  A  LL+     GL  D +
Sbjct: 567 KLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVV 626

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN+LING    G I EAF +F++++  GI  + + YN LI + C+ G +  A  L+   
Sbjct: 627 TYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRG 686

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           + +  IP+ VT+  LV+ F K    E  I      V+  +
Sbjct: 687 VENAFIPNDVTWYILVSNFIKEIGKENGISFGTAKVIPSI 726



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 237/474 (50%), Gaps = 15/474 (3%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           +  ++N  L  LV  N       ++ EM+S G +  V TF +V+ ALC   +++ A SL 
Sbjct: 172 TFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLL 231

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M K G  PN V +  +I+   +   +  ALKL  +M +M     LP+  T N +I G 
Sbjct: 232 RDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMG---CLPDVDTFNDVIYGL 288

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C+L R+    ++   M+  G   N  TY  L++G  R G  +EA  L +++      PN+
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PND 344

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHN 418
           V +   I+     G ++ A   L D + K+ C PD FT++ L  GLC+ G +  A  + N
Sbjct: 345 VHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVN 404

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            +       +  +Y  L++  CK N L  A  +L+ M  +G   +I+ Y  L+   CK G
Sbjct: 405 DMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG 464

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
            +  A+ +   M     KP++  +N++I GLCK    + A +L +     G++ + +TYN
Sbjct: 465 KVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYN 524

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLI+ +   G I EA  + ++M   G  ++++ YN LI   CK G  ++A  L   M+  
Sbjct: 525 TLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK 584

Query: 598 GIIPDYVTYTTLVT---RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            ++P  ++   L+    R  K C+    +EL  DM+  G++PD  TYN++I+ L
Sbjct: 585 DLVPSNISCNLLINGLCRVGKVCN---ALELLRDMIHRGLAPDVVTYNSLINGL 635



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 178/335 (53%), Gaps = 3/335 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F+ L+    + G    A D++  +   G + ++  +   L    K N++    
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAG 435

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +  EM + G+  N+  +N+++ ALCK  K+ +AL +   M   G  P++  FN +I   
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+V   E AL L+R M +   D V+ N+VT+N +I+ F + G ++ A ++   M+  G  
Sbjct: 496 CKVDRKEDALALYRDMLL---DGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCP 552

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY  LI  + + G++E+AL L DEMV++ L+P+N+  N  I+ L   G V  AL +
Sbjct: 553 LDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALEL 612

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L DMI + + PD  TY+ L  GLC+ G +++AF L N++  E +  DA +YN LI + C+
Sbjct: 613 LRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCR 672

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
           +     A  LL   +    IP+ +T+  L+  + K
Sbjct: 673 AGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P   ++N +++          A  + Y M+  G+   V T+  ++         + A  L
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +M K G +PN+VVY + IH L     V  AL +L +M      PD  T++ +  GLCR
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
              + +  KL +++L      +  +Y +L+N LC+   +  A+ LL+ +      P+ + 
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVH 346

Query: 467 YGTLIDGYCKGGNIEGA-VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           +  LI+GY K G ++ A   +Y+ M K   +P++  +N++I+GLCK   + +A  ++   
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G   + ITY TL++G+    ++ EA  + +EM   G  +N +GYN+L+  LCK G  
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +A +++  M   G  PD  T+ TL+    K    E+ + L+ DM+L GV  +  TYN +
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526

Query: 645 ISPLL 649
           I   L
Sbjct: 527 IHAFL 531



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 120/301 (39%), Gaps = 46/301 (15%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K  C     Y +L   L      K   KL  Q+ EE +      +  ++ Y  ++N    
Sbjct: 96  KGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQ 155

Query: 448 AKQLLSSMIVRGLI---PDIITYGTLID-------------------------------- 472
           A ++L  M  +G+    P   +Y  ++D                                
Sbjct: 156 ATRMLLDM--KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGV 213

Query: 473 ---GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
                C    ++ A  +  +M K    PN V+Y ++I+ L K   ++ A  LL+    +G
Sbjct: 214 VMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMG 273

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
            L D  T+N +I G     +I E   +   M   G   N + Y +L+N LC+ G   +A+
Sbjct: 274 CLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ 333

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE-LHDDMVLSGVSPDNQTYNAIISP 647
            L+  +      P+ V +T L+  + K+   +E    L+D M+ +G  PD  T+N +I  
Sbjct: 334 VLLNKV----PTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHG 389

Query: 648 L 648
           L
Sbjct: 390 L 390


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 189/686 (27%), Positives = 295/686 (43%), Gaps = 95/686 (13%)

Query: 15  PLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKW---KILEQMAPSLTNSLVNRVVSEFR 71
           PL R        A+ ST DIV     V L  R+W      ++++PS+T +    V   FR
Sbjct: 6   PLPRP---AAAVASTSTPDIVAELGRV-LSTRRWNKGSAYKRLSPSVTAA---HVADLFR 58

Query: 72  K-----SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV 126
                  P  AL F+  V     F H+  S  A++ LL   R                  
Sbjct: 59  APVSPLDPATALAFFECVARRPGFRHTAASHAALLQLLARRR------------------ 100

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGAT----EGAYDVIQKLKVKGHS---V 179
                              PA +D LV +      T      A D IQ ++  G     +
Sbjct: 101 ------------------APANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVL 142

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S   +N  L  L++ +      KLY  +V  G + +  T+N +I A CK+  L  A   +
Sbjct: 143 SPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYF 202

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS------------------ 281
             + +SG+  +    N ++   C+  DL  A  L   M +M                   
Sbjct: 203 CLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEA 262

Query: 282 --------------GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                          D    N  T+  +I G CK GR+  A  +   M   G+  +V TY
Sbjct: 263 RCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTY 322

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +IDGY + G  ++AL +   M + G  P++  YNS I+ L   G ++ A  +L+  I 
Sbjct: 323 NAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIA 381

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +   P   T++ L  G C+   +  A ++ + ++  +   D  +Y +LIN L K   L  
Sbjct: 382 RGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE 441

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK+ L+ M   GL P+++TY ++IDGYCK G +  A++V++ M+     PN   Y S+I 
Sbjct: 442 AKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIY 501

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL +D  L  A +L+   Q  G+    ITY TLI G     +   AF +F  M   G+  
Sbjct: 502 GLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 561

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           ++  YN+L + LCK G   +A E    ++  G++   VTYT+LV  FSK  + +    L 
Sbjct: 562 DEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEK 652
           + MV  G   D  TY+ ++  L  +K
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQK 644



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 216/440 (49%), Gaps = 6/440 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G   N++T+ L+I  LCKE ++ +A  L   M   G+ P+V  +N +I+  C+ G 
Sbjct: 275 MVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGR 334

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ AL +     +M  +   P+  T+N +I G C  G+++ AEE+    I  G    V T
Sbjct: 335 MKDALGI---KALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVIT 390

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  LI+GY +    ++ALR+   M+      +   Y   I+ L  +  ++ A   L++M 
Sbjct: 391 FTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF 450

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + P+  TY+ +  G C+ G V  A ++   +  E    +A++Y  LI  L +   L 
Sbjct: 451 ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L++ M   G+ P +ITY TLI G CK    + A +++E M++    P+   YN + 
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 570

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           + LCK    + A S L   ++  +L  +TY +L++G+   G    A  +  +M N G   
Sbjct: 571 DALCKSGRAEEAYSFL--VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 628

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y++L+  LCK     +A  ++  M + G+  + V YT +++   K    +    L 
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLF 688

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
           ++M+ SG  P   TY   IS
Sbjct: 689 NEMISSGHKPSATTYTVFIS 708



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 215/472 (45%), Gaps = 8/472 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G S+++H +   +  L K   I     L  EM   G V +V T+N +I   CK  ++++A
Sbjct: 279 GCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 338

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L +   M ++G  P+   +N +I   C  G L+ A +L    G ++     P  +T   +
Sbjct: 339 LGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLN--GAIA-RGFTPTVITFTNL 394

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ING+CK  R++ A  ++  MI +    +++ Y  LI+   +    +EA    +EM   GL
Sbjct: 395 INGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGL 454

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN V Y S I      G V  AL V   M  +   P+ +TY  L  GL ++  + +A  
Sbjct: 455 APNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMA 514

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L  ++ E+ +     +Y  LI   CK +    A +L   M   GL PD   Y  L D  C
Sbjct: 515 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 574

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K G  E A         V  K   V Y S+++G  K  + D A  L++     G   D  
Sbjct: 575 KSGRAEEAYSFLVRKGVVLTK---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLY 631

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TY+ L+       K+ EA ++  +M   G+  N V Y I+I+ + K G +  A+ L   M
Sbjct: 632 TYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           I  G  P   TYT  ++ + K    EE   L  +M   GV+PD  TYN  I+
Sbjct: 692 ISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 223/507 (43%), Gaps = 36/507 (7%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC-GYVENVNT----------------- 218
           H+ + HA    L  L +      + KL   M+SC G  E+V                   
Sbjct: 84  HTAASHA--ALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLV 141

Query: 219 -----FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
                +NL + +L +    E    LY  +++ G+ P+ V +N +I   C+ G L  A + 
Sbjct: 142 LSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201

Query: 274 F---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           F   R+ G+        ++ T N ++ G+C+   +  A  +   M   G   N  +Y  L
Sbjct: 202 FCLLRESGMQM------DTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTIL 255

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I G        EAL L   MV  G   N   Y   I  L  EG +  A  +L +M  + +
Sbjct: 256 IQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGV 315

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P  +TY+ +  G C++G +K A  +   + +     D ++YN LI  LC    L  A++
Sbjct: 316 VPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEE 374

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL+  I RG  P +IT+  LI+GYCK   I+ A++V  NM     K +L  Y  +IN L 
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLI 434

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   L  AK  L      GL  + +TY ++I+GY   G +  A  +F  M + G   N  
Sbjct: 435 KKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAW 494

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  LI  L +     +A  L+  M   GI P  +TYTTL+    K    +    L + M
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 554

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
             +G++PD Q YN +   L     AE+
Sbjct: 555 EQNGLTPDEQAYNVLTDALCKSGRAEE 581



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 228/524 (43%), Gaps = 65/524 (12%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +++     +G + ++  + N ++   K   I    ++   M+S     ++  +
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-- 277
            ++I  L K+C+L+EA      M  +G+ PNVV +  II+  C+VG +  AL++F+ M  
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEH 486

Query: 278 ------------------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
                                           M  D + P  +T+  +I G CK    + 
Sbjct: 487 EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 546

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M + G+  + + Y  L D   + G +EEA      +V++G++   V Y S + 
Sbjct: 547 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVD 603

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G+ + A  ++  M+++    D +TYS+L + LC+   + +A  + +Q+    +  
Sbjct: 604 GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKC 663

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +Y I+I+ + K      AK L + MI  G  P   TY   I  YCK G IE A  + 
Sbjct: 664 NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLI 723

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA------ITYNTLIN 541
             M++    P++V YN  ING      +D A S L+      ++DA       TY  L+ 
Sbjct: 724 GEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKR-----MVDASCEPNCWTYWLLLK 778

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            +     I   +   S M N  I +N V                   +L++ M+ HG+ P
Sbjct: 779 HFLKMSLINAHYVDTSGMWN-WIELNMVW------------------QLLERMMKHGLNP 819

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             VTY++++  F K    EE   L D M+   +SP+ + Y  +I
Sbjct: 820 TVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 863



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/519 (23%), Positives = 231/519 (44%), Gaps = 40/519 (7%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R DDAL +  N++S+N                 CK     +  L+    +    + A + 
Sbjct: 403 RIDDALRVKSNMISSN-----------------CKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + ++   G + ++  + + +    K+  +G   +++K M   G   N  T+  +IY L +
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + KL +A++L  +M + GI P V+ +  +I   C+  + + A +LF    +M  + + P+
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE---MMEQNGLTPD 562

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              +N + +  CK GR   AEE    +++ G+     TY +L+DG+++ G+++ A  L +
Sbjct: 563 EQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 619

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +MV  G   +   Y+  +  L  +  +  AL +L  M    +  +   Y+I+   + + G
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A  L N+++       A +Y + I+  CK   +  A+ L+  M   G+ PD++TY 
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYN 739

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY---------NSIINGLCKDAS----- 514
             I+G    G I+ A    + M     +PN   Y          S+IN    D S     
Sbjct: 740 IFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNW 799

Query: 515 --LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             L+    LL+   + GL    +TY+++I G+    ++ EA  +   M    I+ N+  Y
Sbjct: 800 IELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY 859

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            +LI   C    + +A   +  MI  G  P   +Y  L+
Sbjct: 860 TMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLI 898



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 205/454 (45%), Gaps = 50/454 (11%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           FD+A  L   +M  N ++P E            +A   + DAL ++    G  E AY  +
Sbjct: 544 FDNAFRLF-EMMEQNGLTPDE------------QAYNVLTDALCKS----GRAEEAYSFL 586

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            +   KG  ++   + + +    K         L ++MV+ G   ++ T+++++ ALCK+
Sbjct: 587 VR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            KL EALS+  +M  SG+  N+V + +II+E  + G  + A  LF +M + SG    P++
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM-ISSGHK--PSA 700

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+   I+ +CK+GR+E AE +   M + G+  +V TY   I+G    G  + A      
Sbjct: 701 TTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKR 760

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALF---------------------VLSDMIDK 388
           MV     PN   Y     WL  +  ++ +L                      +L  M+  
Sbjct: 761 MVDASCEPNCWTY-----WLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKH 815

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P   TYS +  G C+   +++A  L + +L + +  +   Y +LI   C       A
Sbjct: 816 GLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKA 875

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
              ++ MI  G  P + +Y  LI G C  G+ + A  ++ ++  ++   N V +  + +G
Sbjct: 876 VSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935

Query: 509 LCKDASLDAAKSLLQA-SQRIGLLDAITYNTLIN 541
           L K   +D    LL A   R   +D+ +Y+ L +
Sbjct: 936 LLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 134/348 (38%), Gaps = 83/348 (23%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E CKA    +  L++A  +      A  ++ ++ V G   +I A+   +S ++K  +   
Sbjct: 624 EGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L+ EM+S G+  +  T+ + I + CK  ++EEA  L   M + G+ P+VV +N+ IN
Sbjct: 684 AKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743

Query: 260 EACQVGDLEFA----------------------LKLFRKMGVMSGDSVL----------- 286
               +G ++ A                      LK F KM +++   V            
Sbjct: 744 GCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELN 803

Query: 287 ---------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
                          P  VT++ II GFCK  R+E A  +   M+   I  N   Y  LI
Sbjct: 804 MVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLI 863

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--LF--------- 380
                     +A+    +M++ G  P    Y+  I  L  EGD + A  LF         
Sbjct: 864 KCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYN 923

Query: 381 ------------------------VLSDMIDKHICPDHFTYSILTKGL 404
                                   +L+ M ++H   D  +YS+LT  +
Sbjct: 924 HNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 260/534 (48%), Gaps = 40/534 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+    + G    A ++++ +K +G +  I  +N  ++   K+ ++    KL  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 NV T+  +I A CK   LE+AL +Y  M    + P+VV +  I+N  C+ G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +FR+M  +    V+PN  ++  +I+   K G V  A  ++  M+  GI  +V  Y 
Sbjct: 140 EAKSVFREMEEV---GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+DG  + G +  A  +   +++  L+PN V Y++ I      GDV     +L +M +K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI------------ 436
           HI P+   YS +  G  + G + +A  +  ++++ +++ + + Y  LI            
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 437 -----------------------NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                                  N L +S  +  A +L   M+ RGL+PD + Y +++DG
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           + K G    A  + + M +     ++V YN +INGL K    + ++S     +++GL  D
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPD 435

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + T+NT+IN Y   G +  A  + +EM++ G+  N +  NIL+  LC  G  ++  +L+ 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M++ G  P   T+  ++   SK+   + ++ +HD +V  GV  D  TYN +IS
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 242/470 (51%), Gaps = 5/470 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +N  +    +  EI R  +L + M + G   ++ T+N ++   CK   L  A  L 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +    + PNV+ +  +I+  C+   LE AL ++ +M V    S++P+ VT+ CI+NG 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV---KSLVPDVVTYTCIMNGL 132

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G+VE A+ +   M + G+  N  +YATLID   + G+  EA  L   MV RG+  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           VVY + +  LF  G    A  +   ++++ + P+  TYS L  G C+ G V +   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+H+  +   Y+ +++   K   L  A  ++  M+ R ++P++  YGTLIDGY K   
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
              A+ +++ MK    + N  + +S +N L +   ++ A  L +     GLL D + Y +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +++G+F  GK ++AF +  EM       + V YN+LIN L K G Y ++      M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + PD  T+ T++  + K  +    ++L ++M   G+ P++ T N ++  L
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 219/412 (53%), Gaps = 6/412 (1%)

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I  +V  FN++I+  C+ G++  A++L   M     +   P+ VT+N ++NGFCK+G + 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKT---EGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A+++   +    ++ NV TY TLID Y +    E+AL + DEM  + L+P+ V Y   +
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G VE A  V  +M +  + P+ F+Y+ L   L + G V +AF L  +++   + 
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D   Y  L++ L K+     A+ +   ++   L+P+ +TY  LIDG+CK G++     +
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFI 545
            + M++    PN+++Y+SI++G  K   L+ A  +++   QR  L +   Y TLI+GYF 
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
             +   A  +F EM++ G+  N    +  +N L + G  ++A EL K M+  G++PD V 
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL--LGEKSAE 655
           YT+++  F K     +   +  +M       D   YN +I+ L  LG+  +E
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE 421



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 245/523 (46%), Gaps = 10/523 (1%)

Query: 132 LEGLLDSYEICKATPAVFDALVRACT-----QIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           LE  L  Y+       V D +   C      + G  E A  V ++++  G   +  ++  
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +  L K   +   + L   MV  G   +V  +  ++  L K      A  ++  +L+  
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PN V ++ +I+  C++GD+     L ++M       + PN + ++ I++G+ K G + 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEM---EEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A ++   M++  I  NV  Y TLIDGY +      AL L  EM  RGL  NN V +S +
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G +E A  +  DM+ + + PD   Y+ +  G  + G    AF +  ++ E+   
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +YN+LIN L K     + +   + M   GL PD  T+ T+I+ YCK GN+  A+++
Sbjct: 400 FDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKL 458

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
              MK    KPN +  N ++  LC    ++    LL     +G      T+  +++    
Sbjct: 459 LNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSK 518

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           + +      M  ++  +G+ ++   YN LI+  C+ G  ++A  + K M+  GI+ D +T
Sbjct: 519 SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIIT 578

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           Y  L+  +  +   ++   +H  M+  GVSP+ +TYN ++  L
Sbjct: 579 YNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 243/500 (48%), Gaps = 5/500 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ AL+    + G    A D+ Q L  +    +   ++  +    KL ++ +   L +EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  NV  ++ ++    K+  L EA+ +  +M++  I PNV  +  +I+   +    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL LF++M       +  N+   +  +N   + GR+E A+E+   M+  G+  +   Y
Sbjct: 314 GIALDLFKEM---KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +++DG+ + G   +A  +  EM ++    + V YN  I+ LF  G  E   F  + M  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESF-HTGMRQ 429

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  T++ +    C+ G +  A KL N++    +  ++ + NIL+  LC +  +  
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              LL+ M+V G  P   T+  ++D   K    +  + +++ +  +  K +L  YN++I+
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             C+   +  A  + +     G+L D ITYN LI+GY I+  + +AFA+ S+M   G++ 
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YNIL+  L      ++A  L+  M   G++P+  TY  LV+   K  + +E ++L+
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
            +M+  G  P  +TYN +IS
Sbjct: 670 CEMITKGFVPKTRTYNVLIS 689



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 228/464 (49%), Gaps = 5/464 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ ++V   T+ G    A DV++K+  +    ++  +   +    K ++ G    L+KEM
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G  EN    +  +  L +  ++EEA  L+  M+  G+ P+ V +  +++   + G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  + ++M   S      + V +N +ING  KLG+ E +E     M + G+  +  T+
Sbjct: 384 SDAFNIAQEMTEKSSGF---DVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATF 439

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I+ Y + G+   AL+L +EM   GL PN++  N  +  L A G++E  + +L+DM+ 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P   T+  +     ++        +H+Q++   +  D  +YN LI+  C+   +  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M+ +G++ DIITY  LI GYC   +++ A  V+  M      PN+  YN ++ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL     +  A  L+   +  GL+ +A TY+ L++G+   G + E   ++ EM   G   
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
               YN+LI+   K     QA+ELM+ M + GI P+  TY  L+
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 203/429 (47%), Gaps = 17/429 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V D+ V    + G  E A ++ + +  +G       + + +    K  +    + + +EM
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  +V  +N++I  L K  K E   S +  M + G+ P+   FN +IN  C+ G+L
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNL 452

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             ALKL  +M       + PNS+T N ++   C  G +E   ++   M+  G      T+
Sbjct: 453 GNALKLLNEM---KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTH 509

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++D  ++   ++  L + D++V  G+  +   YN+ I      G +  A  V  DM+ 
Sbjct: 510 KAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I  D  TY+ L  G C +  +K+AF +H+Q+L E +  +  +YNIL+  L  +  +  
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L++ M  RGL+P+  TY  L+ G+ K GN++  V++Y  M      P    YN +I+
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF-------INGKI-----AEAFA 554
              K   +  AK L+Q  Q  G+  ++ TY+ LI G++       +N  +     AEA  
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749

Query: 555 MFSEMRNVG 563
           +F EM   G
Sbjct: 750 LFEEMNEKG 758



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 68/121 (56%)

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           +N LI+GY  NG+I+ A  +   M+  G A + V YN L+N  CK G    A++LM  + 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L  + P+ +TYTTL+  + K+   E+ + ++D+M +  + PD  TY  I++ L      E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 656 D 656
           +
Sbjct: 140 E 140



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 110/223 (49%), Gaps = 15/223 (6%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + ++ L+    ++G    A  V + +  KG    I  +N  +      + + + + ++ +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M++ G   NV T+N+++  L     ++EA  L  +M + G+ PN   ++++++   ++G+
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++  +KL+ +M +  G   +P + T+N +I+ F K  ++  A+E+   M   GI  N  T
Sbjct: 662 MKECVKLYCEM-ITKG--FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSST 718

Query: 327 YATLIDGY------------ARGGSSEEALRLCDEMVKRGLMP 357
           Y  LI G+             +     EA RL +EM ++G +P
Sbjct: 719 YDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/602 (25%), Positives = 278/602 (46%), Gaps = 45/602 (7%)

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL 135
           LALE++  +  +  F H+  +   ++  L + R  D    L+  +           LEG+
Sbjct: 58  LALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMK----------LEGI 107

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
             S ++       F +++ +  + G++E A     +++      ++  +N+ L  L+  N
Sbjct: 108 SCSEDL-------FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDEN 160

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
                  +Y  M   G   NV T+N+++ ALCK  +++ A  L   M   G  P+ V + 
Sbjct: 161 RFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYT 220

Query: 256 MIINEACQVGDLEFALKL---------------------------FRKMGVMSGDSVLPN 288
            +I+  C++G ++ A +L                           F+ +  M    + PN
Sbjct: 221 TLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            +++  IIN     G VE +  +   M   G   N+ T+ +LI G+   G S EAL   D
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M++ G++PN V YN+ +H L ++  +  A+ V + M     CP+  TYS L  G  + G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            +  A ++ N ++      +  +Y  +++ LC+++    A  L+ +M V    P+ +T+ 
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           T I G C  G ++ A++V++ M      PN   YN +++ L KD     A  L++  +  
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+ L+ +TYNT+I GY   G + EA  +  +M   G   + +  NI+I+  CK G    A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            +LM  +      PD + YT+L++    +   EE I     M+  G+SP+  T+N ++  
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640

Query: 648 LL 649
           L 
Sbjct: 641 LF 642



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 3/377 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  ++ A +  G  E +  V+ K+  +G S ++H + + +               +  M+
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G V NV  +N +++ LC +  L +A+S++ +M  +G  PNV  ++ +I+   + GDL+
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +++  M +  G    PN V + C+++  C+      A  +   M       N  T+ 
Sbjct: 404 GASEVWNWM-ITHG--CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T I G    G  + A+++ D+M   G  PN   YN  +  L  +     A  ++ DM  +
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I  +  TY+ +  G C  G + +A +L  +++      DA + NI+I+  CK   +  A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            QL+  +      PDII Y +LI G C    +E A+     M      PN+  +N ++  
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640

Query: 509 LCKDASLDAAKSLLQAS 525
           L  +     A   L AS
Sbjct: 641 LFSNMGHSGAVQFLDAS 657



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 213/499 (42%), Gaps = 45/499 (9%)

Query: 28  NPSTEDIVFRAICVNLR-QRKWKILEQMAP-----------SLTNSLVNRVVSEFRKSPK 75
           N  T +I+ +A+C N R     K+L +M+            +L +SL    + + +++ +
Sbjct: 180 NVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK--LGKVKEARE 237

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEF 131
           LA+ F   V   N          A+++ +     F++A  L+  +M+     N +S    
Sbjct: 238 LAMSFTPSVPVYN----------ALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 132 LEGLLDSYEI--------------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           +  L D+  +              C      F +L++     G +  A D   ++  +G 
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
             ++ A+N  +  L     +G    ++ +M   G   NV T++ +I    K   L+ A  
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASE 407

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           ++  M+  G  PNVV +  +++  C+      A  L   M V   ++  PN+VT N  I 
Sbjct: 408 VWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV---ENCPPNTVTFNTFIK 464

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G C  GRV++A ++   M  +G   N  TY  L+D   +     EA  L  +M  RG+  
Sbjct: 465 GLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIEL 524

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V YN+ I+     G +  AL +L  M+ +   PD  T +I+    C+ G V  A +L 
Sbjct: 525 NLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLM 584

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++       D  +Y  LI+ +C    +  A   L  M+  G+ P++ T+  L+      
Sbjct: 585 DRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644

Query: 478 GNIEGAVQVYENMKKVEKK 496
               GAVQ  +    ++ K
Sbjct: 645 MGHSGAVQFLDASSIMQPK 663



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 6/300 (2%)

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHI-CPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           + Y   I  L +E +++   ++L  M  + I C +    S++     R G  +QA K   
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI-GSYRRAGSSEQALKTFY 135

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ +  +      YN +++ L   N       + S+M   G+ P++ TY  L+   CK  
Sbjct: 136 RMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNN 195

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
            ++GA ++   M      P+ V Y ++I+ LCK   +  A+ L  +           YN 
Sbjct: 196 RVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTP----SVPVYNA 251

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LING        EAF +  EM N GI  N + Y  +IN L   G  + +  ++  M   G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             P+  T+T+L+  F       E ++  D M+  GV P+   YNA++  L  ++S  D V
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 182/727 (25%), Positives = 301/727 (41%), Gaps = 146/727 (20%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL 104
            +  K L Q    L  +LV  V+S   K+P+L ++F+ W G    + H+     A++ +L
Sbjct: 114 HKTQKFLRQFREKLNETLVVDVLS-LVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVL 172

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
                              N   P +FL  + D  E  +    + + L+R C + G    
Sbjct: 173 G---------------CGGNDRVPEQFLREIRD--EDKEILGKLLNVLIRKCCRNGLWNV 215

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A + + +LK  G+  S   +N  +   ++ + +   + +++EM   G+  +  T    ++
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVH 275

Query: 225 ALCK--------------ECKL------------------EEALSLYYRMLKSGIWPNVV 252
            LCK              E KL                  EEA+    RM  S   PNVV
Sbjct: 276 LLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 253 C-----------------------------------FNMIINEACQVGDLEFALKLFRKM 277
                                               FN +I+  C+ GD  +A KL +KM
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 278 GVMSGDSVLPNSVTHNCIINGFC------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           G        P  V +N +I G C       L  +E AE+    M+ A +  N    + L 
Sbjct: 396 GDCG---CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A  +  EM+ +G +P+   Y+  I  L     V+ A  +  +M   H+ 
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD FTY+IL    C+ G ++QA K  ++++ +    +  +Y  LI+   K+  +++A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK------------KVE----K 495
              M+  G IP+++TY  LIDG+CK G IE A Q+Y  M+            K++    +
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  Y ++++GLCK   +  A+ LL      G   + I Y+ LI+G+   GK+ EA  
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 555 MFSEMRNVG-----------------------------------IAVNKVGYNILINFLC 579
           +F++M   G                                    A N + Y  +I+ LC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A  LM +M   G  P+ VTYT ++  F K    ++ +EL   M   G +P+  
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 640 TYNAIIS 646
           TY  +I+
Sbjct: 813 TYRVLIN 819



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 243/519 (46%), Gaps = 28/519 (5%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L R     G  E AY +I+++  KG       ++  +  L   +++   + L++EM S  
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            V +V T+ ++I + CK   L++A   +  M++ G  PNVV +  +I+   +   +  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--------- 322
           +LF    +M  +  +PN VT+  +I+G CK G++E A +I YA ++   D          
Sbjct: 571 ELFE---MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI-YARMRGNADIPDVDMYFKI 626

Query: 323 --------NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
                   N+ TY  L+DG  +    +EA  L D M   G  PN++VY++ I      G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  V + M ++   P+ +TYS L   L ++  +  A K+ +++LE     +   Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +I+ LCK      A +L+S M  +G  P+++TY  +IDG+ K G ++  +++   M    
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             PN V Y  +IN  C    LD A  LL +  Q         Y  +I G+  N +   + 
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISL 864

Query: 554 AMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM--ILHGIIPDYVTYTTLV 610
            +  E+  NV + +    Y ILI+  CK G  + A EL K M         D   Y++L+
Sbjct: 865 GLLDEIAENVAVPIIP-AYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLI 923

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              S     ++  EL+ DM+  G  P+   +  ++  L+
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLI 962



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 225/490 (45%), Gaps = 36/490 (7%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A+ + +++K       +  +   +    K+  + +  K + EMV  G   NV T+  +
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTAL 556

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----- 277
           I+A  K  K+  A  L+  ML  G  PNVV +  +I+  C+ G +E A +++ +M     
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616

Query: 278 --------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
                    +  G+   PN  T+  +++G CK  +V+ A ++   M   G + N   Y  
Sbjct: 617 IPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDA 676

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDG+ + G  +EA  +  +M +RG  PN   Y+S I  LF +  ++ AL VLS M++  
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P+   Y+ +  GLC+ G   +A++L + + E+    +  +Y  +I+   K+  +    
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L+  M  +G  P+ +TY  LI+  C  G ++ A Q+ + MK+     ++  Y  +I G 
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856

Query: 510 CKDASLDAAKSLLQASQRIGLLDAI----------TYNTLINGYFINGKIAEAFAMFSEM 559
            ++  +            +GLLD I           Y  LI+ +   G++  A  +  EM
Sbjct: 857 NREFIIS-----------LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 560 RNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            +     A +K  Y+ LI  L       +A EL   MI  G IP+   +  LV    +  
Sbjct: 906 SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965

Query: 618 SPEEVIELHD 627
             EE ++L D
Sbjct: 966 RWEEALQLSD 975



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 166/378 (43%), Gaps = 47/378 (12%)

Query: 135 LLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD  S E C+    V+DAL+    ++G  + A  V  K+  +G+  +++ +++ +  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K   +    K+   M+      NV  +  +I  LCK  K +EA  L   M + G  PNVV
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+   + G ++  L+L R+MG        PN VT+  +IN  C  G ++ A ++ 
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMG---AKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +     ++  Y  +I+G+ R      +L L DE+ +   +P               
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVP--------------- 877

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--LEEHMVGDAY 430
                            I P    Y IL    C+ G ++ A +LH ++     +   D  
Sbjct: 878 -----------------IIP---AYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKD 917

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE-- 488
            Y+ LI  L  ++ +  A +L + MI RG IP++  +  L+ G  +    E A+Q+ +  
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCI 977

Query: 489 -NMKKVEKKPNLVIYNSI 505
             M  V    +L++ ++I
Sbjct: 978 CQMVHVSNSSSLILKHAI 995



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 45/326 (13%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    R G    AL     +   G  P+ + YN+ +        ++ A  V  +M D  
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
              D +T       LC+ G  ++A  L   + +E    D   Y  +I+ LC+++    A 
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             LS M     IP+++TY  L+ G  +   +    ++   M      P+  I+NS+I+  
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 510 CKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAE------AFAMFSEMRNV 562
           C+      A  LL+     G     + YN LI G   N K+        A   + EM + 
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            + +NKV  + L   LC  G +++A  +++ M+  G IP                     
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP--------------------- 478

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
                         D  TY+ +I  L
Sbjct: 479 --------------DTSTYSKVIGLL 490


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 260/534 (48%), Gaps = 40/534 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+    + G    A ++++ +K +G +  I  +N  ++   K+ ++    KL  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 NV T+  +I A CK   LE+AL +Y  M    + P+VV +  I+N  C+ G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +FR+M  +    V+PN  ++  +I+   K G V  A  ++  M+  GI  +V  Y 
Sbjct: 140 EAKSVFREMEEV---GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+DG  + G +  A  +   +++  L+PN V Y++ I      GDV     +L +M +K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI------------ 436
           HI P+   YS +  G  + G + +A  +  ++++ +++ + + Y  LI            
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 437 -----------------------NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                                  N L +S  +  A +L   M+ RGL+PD + Y +++DG
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           + K G    A  + + M +     ++V YN +INGL K    + ++S     +++GL  D
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPD 435

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + T+NT+IN Y   G +  A  + +EM++ G+  N +  NIL+  LC  G  ++  +L+ 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M++ G  P   T+  ++   SK+   + ++ +HD +V  GV  D  TYN +IS
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 242/470 (51%), Gaps = 5/470 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +N  +    +  EI R  +L + M + G   ++ T+N ++   CK   L  A  L 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +    + PNV+ +  +I+  C+   LE AL ++ +M V    S++P+ VT+ CI+NG 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV---KSLVPDVVTYTCIMNGL 132

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G+VE A+ +   M + G+  N  +YATLID   + G+  EA  L   MV RG+  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           VVY + +  LF  G    A  +   ++++ + P+  TYS L  G C+ G V +   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+H+  +   Y+ +++   K   L  A  ++  M+ R ++P++  YGTLIDGY K   
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
              A+ +++ MK    + N  + +S +N L +   ++ A  L +     GLL D + Y +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +++G+F  GK ++AF +  EM       + V YN+LIN L K G Y ++      M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + PD  T+ T++  + K  +    ++L ++M   G+ P++ T N ++  L
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 219/412 (53%), Gaps = 6/412 (1%)

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I  +V  FN++I+  C+ G++  A++L   M     +   P+ VT+N ++NGFCK+G + 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKT---EGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A+++   +    ++ NV TY TLID Y +    E+AL + DEM  + L+P+ V Y   +
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G VE A  V  +M +  + P+ F+Y+ L   L + G V +AF L  +++   + 
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D   Y  L++ L K+     A+ +   ++   L+P+ +TY  LIDG+CK G++     +
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFI 545
            + M++    PN+++Y+SI++G  K   L+ A  +++   QR  L +   Y TLI+GYF 
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
             +   A  +F EM++ G+  N    +  +N L + G  ++A EL K M+  G++PD V 
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL--LGEKSAE 655
           YT+++  F K     +   +  +M       D   YN +I+ L  LG+  +E
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE 421



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 245/523 (46%), Gaps = 10/523 (1%)

Query: 132 LEGLLDSYEICKATPAVFDALVRACT-----QIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           LE  L  Y+       V D +   C      + G  E A  V ++++  G   +  ++  
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +  L K   +   + L   MV  G   +V  +  ++  L K      A  ++  +L+  
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PN V ++ +I+  C++GD+     L ++M       + PN + ++ I++G+ K G + 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEM---EEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A ++   M++  I  NV  Y TLIDGY +      AL L  EM  RGL  NN V +S +
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G +E A  +  DM+ + + PD   Y+ +  G  + G    AF +  ++ E+   
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +YN+LIN L K     + +   + M   GL PD  T+ T+I+ YCK GN+  A+++
Sbjct: 400 FDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKL 458

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
              MK    KPN +  N ++  LC    ++    LL     +G      T+  +++    
Sbjct: 459 LNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSK 518

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           + +      M  ++  +G+ ++   YN LI+  C+ G  ++A  + K M+  GI+ D +T
Sbjct: 519 SRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIIT 578

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           Y  L+  +  +   ++   +H  M+  GVSP+ +TYN ++  L
Sbjct: 579 YNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 243/500 (48%), Gaps = 5/500 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ AL+    + G    A D+ Q L  +    +   ++  +    KL ++ +   L +EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  NV  ++ ++    K+  L EA+ +  +M++  I PNV  +  +I+   +    
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL LF++M       +  N+   +  +N   + GR+E A+E+   M+  G+  +   Y
Sbjct: 314 GIALDLFKEM---KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +++DG+ + G   +A  +  EM ++    + V YN  I+ LF  G  E   F  + M  
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESF-HTGMRQ 429

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD  T++ +    C+ G +  A KL N++    +  ++ + NIL+  LC +  +  
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              LL+ M+V G  P   T+  ++D   K    +  + +++ +  +  K +L  YN++I+
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             C+   +  A  + +     G+L D ITYN LI+GY I+  + +AFA+ S+M   G++ 
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YNIL+  L      ++A  L+  M   G++P+  TY  LV+   K  + +E ++L+
Sbjct: 610 NVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLY 669

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
            +M+  G  P  +TYN +IS
Sbjct: 670 CEMITKGFVPKTRTYNVLIS 689



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 228/464 (49%), Gaps = 5/464 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ ++V   T+ G    A DV++K+  +    ++  +   +    K ++ G    L+KEM
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G  EN    +  +  L +  ++EEA  L+  M+  G+ P+ V +  +++   + G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  + ++M   S      + V +N +ING  KLG+ E +E     M + G+  +  T+
Sbjct: 384 SDAFNIAQEMTEKSSGF---DVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATF 439

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I+ Y + G+   AL+L +EM   GL PN++  N  +  L A G++E  + +L+DM+ 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P   T+  +     ++        +H+Q++   +  D  +YN LI+  C+   +  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M+ +G++ DIITY  LI GYC   +++ A  V+  M      PN+  YN ++ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL     +  A  L+   +  GL+ +A TY+ L++G+   G + E   ++ EM   G   
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
               YN+LI+   K     QA+ELM+ M + GI P+  TY  L+
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 203/429 (47%), Gaps = 17/429 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V D+ V    + G  E A ++ + +  +G       + + +    K  +    + + +EM
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  +V  +N++I  L K  K E   S +  M + G+ P+   FN +IN  C+ G+L
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNL 452

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             ALKL  +M       + PNS+T N ++   C  G +E   ++   M+  G      T+
Sbjct: 453 GNALKLLNEM---KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTH 509

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++D  ++   ++  L + D++V  G+  +   YN+ I      G +  A  V  DM+ 
Sbjct: 510 KAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I  D  TY+ L  G C +  +K+AF +H+Q+L E +  +  +YNIL+  L  +  +  
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L++ M  RGL+P+  TY  L+ G+ K GN++  V++Y  M      P    YN +I+
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF-------INGKI-----AEAFA 554
              K   +  AK L+Q  Q  G+  ++ TY+ LI G++       +N  +     AEA  
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749

Query: 555 MFSEMRNVG 563
           +F EM   G
Sbjct: 750 LFEEMNEKG 758



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 68/121 (56%)

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           +N LI+GY  NG+I+ A  +   M+  G A + V YN L+N  CK G    A++LM  + 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L  + P+ +TYTTL+  + K+   E+ + ++D+M +  + PD  TY  I++ L      E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 656 D 656
           +
Sbjct: 140 E 140



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 110/223 (49%), Gaps = 15/223 (6%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + ++ L+    ++G    A  V + +  KG    I  +N  +      + + + + ++ +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M++ G   NV T+N+++  L     ++EA  L  +M + G+ PN   ++++++   ++G+
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++  +KL+ +M +  G   +P + T+N +I+ F K  ++  A+E+   M   GI  N  T
Sbjct: 662 MKECVKLYCEM-ITKG--FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSST 718

Query: 327 YATLIDGYARGGSSE------------EALRLCDEMVKRGLMP 357
           Y  LI G+ +                 EA RL +EM ++G +P
Sbjct: 719 YDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 182/727 (25%), Positives = 301/727 (41%), Gaps = 146/727 (20%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL 104
            +  K L Q    L  +LV  V+S   K+P+L ++F+ W G    + H+     A++ +L
Sbjct: 114 HKTQKFLRQFREKLNETLVVDVLS-LVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVL 172

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
                              N   P +FL  + D  E  +    + + L+R C + G    
Sbjct: 173 G---------------CGGNDRVPEQFLREIRD--EDKEILGKLLNVLIRKCCRNGLWNV 215

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A + + +LK  G+  S   +N  +   ++ + +   + +++EM   G+  +  T    ++
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVH 275

Query: 225 ALCK--------------ECKL------------------EEALSLYYRMLKSGIWPNVV 252
            LCK              E KL                  EEA+    RM  S   PNVV
Sbjct: 276 LLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 253 C-----------------------------------FNMIINEACQVGDLEFALKLFRKM 277
                                               FN +I+  C+ GD  +A KL +KM
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 278 GVMSGDSVLPNSVTHNCIINGFC------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           G        P  V +N +I G C       L  +E AE+    M+ A +  N    + L 
Sbjct: 396 GDCG---CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A  +  EM+ +G +P+   Y+  I  L     V+ A  +  +M   H+ 
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD FTY+IL    C+ G ++QA K  ++++ +    +  +Y  LI+   K+  +++A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK------------KVE----K 495
              M+  G IP+++TY  LIDG+CK G IE A Q+Y  M+            K++    +
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  Y ++++GLCK   +  A+ LL      G   + I Y+ LI+G+   GK+ EA  
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 555 MFSEMRNVG-----------------------------------IAVNKVGYNILINFLC 579
           +F++M   G                                    A N + Y  +I+ LC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A  LM +M   G  P+ VTYT ++  F K    ++ +EL   M   G +P+  
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 640 TYNAIIS 646
           TY  +I+
Sbjct: 813 TYRVLIN 819



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 243/519 (46%), Gaps = 28/519 (5%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L R     G  E AY +I+++  KG       ++  +  L   +++   + L++EM S  
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            V +V T+ ++I + CK   L++A   +  M++ G  PNVV +  +I+   +   +  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--------- 322
           +LF    +M  +  +PN VT+  +I+G CK G++E A +I YA ++   D          
Sbjct: 571 ELFE---MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI-YARMRGNADIPDVDMYFKI 626

Query: 323 --------NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
                   N+ TY  L+DG  +    +EA  L D M   G  PN++VY++ I      G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  V + M ++   P+ +TYS L   L ++  +  A K+ +++LE     +   Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +I+ LCK      A +L+S M  +G  P+++TY  +IDG+ K G ++  +++   M    
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             PN V Y  +IN  C    LD A  LL +  Q         Y  +I G+  N +   + 
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISL 864

Query: 554 AMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM--ILHGIIPDYVTYTTLV 610
            +  E+  NV + +    Y ILI+  CK G  + A EL K M         D   Y++L+
Sbjct: 865 GLLDEIAENVAVPIIP-AYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLI 923

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              S     ++  EL+ DM+  G  P+   +  ++  L+
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLI 962



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 225/490 (45%), Gaps = 36/490 (7%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A+ + +++K       +  +   +    K+  + +  K + EMV  G   NV T+  +
Sbjct: 497 DNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTAL 556

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----- 277
           I+A  K  K+  A  L+  ML  G  PNVV +  +I+  C+ G +E A +++ +M     
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNAD 616

Query: 278 --------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
                    +  G+   PN  T+  +++G CK  +V+ A ++   M   G + N   Y  
Sbjct: 617 IPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDA 676

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDG+ + G  +EA  +  +M +RG  PN   Y+S I  LF +  ++ AL VLS M++  
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P+   Y+ +  GLC+ G   +A++L + + E+    +  +Y  +I+   K+  +    
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L+  M  +G  P+ +TY  LI+  C  G ++ A Q+ + MK+     ++  Y  +I G 
Sbjct: 797 ELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856

Query: 510 CKDASLDAAKSLLQASQRIGLLDAI----------TYNTLINGYFINGKIAEAFAMFSEM 559
            ++  +            +GLLD I           Y  LI+ +   G++  A  +  EM
Sbjct: 857 NREFIIS-----------LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905

Query: 560 RNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            +     A +K  Y+ LI  L       +A EL   MI  G IP+   +  LV    +  
Sbjct: 906 SSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965

Query: 618 SPEEVIELHD 627
             EE ++L D
Sbjct: 966 RWEEALQLSD 975



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 156/356 (43%), Gaps = 44/356 (12%)

Query: 135 LLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD  S E C+    V+DAL+    ++G  + A  V  K+  +G+  +++ +++ +  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K   +    K+   M+      NV  +  +I  LCK  K +EA  L   M + G  PNVV
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+   + G ++  L+L R+MG        PN VT+  +IN  C  G ++ A ++ 
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMG---AKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +     ++  Y  +I+G+ R      +L L DE+ +   +P               
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVP--------------- 877

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--LEEHMVGDAY 430
                            I P    Y IL    C+ G ++ A +LH ++     +   D  
Sbjct: 878 -----------------IIP---AYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKD 917

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            Y+ LI  L  ++ +  A +L + MI RG IP++  +  L+ G  +    E A+Q+
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 45/326 (13%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    R G    AL     +   G  P+ + YN+ +        ++ A  V  +M D  
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
              D +T       LC+ G  ++A  L   + +E    D   Y  +I+ LC+++    A 
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             LS M     IP+++TY  L+ G  +   +    ++   M      P+  I+NS+I+  
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 510 CKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAE------AFAMFSEMRNV 562
           C+      A  LL+     G     + YN LI G   N K+        A   + EM + 
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            + +NKV  + L   LC  G +++A  +++ M+  G IP                     
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP--------------------- 478

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
                         D  TY+ +I  L
Sbjct: 479 --------------DTSTYSKVIGLL 490


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 262/529 (49%), Gaps = 28/529 (5%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA------------------T 145
           L   +R  DA  L G +   N V        L+D Y  CKA                   
Sbjct: 111 LCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGY--CKAGEVDVAIGLRERMKKEKVE 168

Query: 146 PAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE-IGRFWK 202
           P++  F++L+    +    E A  ++ ++K  G       ++     L+K ++  G    
Sbjct: 169 PSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALD 228

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LY+E +  G   +  T ++++  LCKE K+E+A  +   +++ G+ P  V +N I+N  C
Sbjct: 229 LYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYC 288

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q+GD++ A+    +M       + PN +  N +I+ FC++  ++ AEE    M+  GI  
Sbjct: 289 QIGDMDRAILTIEQM---ESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY  LIDGY R        ++ +EM + G  PN + Y S I+ L  +G +  A  VL
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM+ + + P+   Y++L  G C  G +++A +  +++ +  +     +YN LI  LCK 
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKM 465

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  A+++   +   G  PD+ITY +LI GY   GN +  +++YE MKK+  KP +  +
Sbjct: 466 GKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           + +I+G C    +   ++L     ++ L  D + YN +I+ Y   G + +AF++  EM +
Sbjct: 526 HPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVD 584

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +G+  +   YN LI    K G   + ++L+  M   G+IP+  TY+ L+
Sbjct: 585 MGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 261/532 (49%), Gaps = 40/532 (7%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+  C++        ++   ++ +G   S       +  LV+  +      L+KEMV  G
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +  +   +   + A  K   L+ A+ L+  M +  + PNV  +N++I   C+   +  A 
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           KLF   G MS  +++PN VT N +I+G+CK G V+ A  +R  M K  ++ ++ T+ +L+
Sbjct: 122 KLF---GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLL 178

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA-LFVLSDMIDKHI 390
            G  +    EEA  + +E+   G +P+   Y+     L    D  GA L +  + I K +
Sbjct: 179 SGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGV 238

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             D++T SIL  GLC+ G V++A ++   ++E  +V     YN ++N  C+  ++  A  
Sbjct: 239 KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAIL 298

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCK---------------GGNIEGAVQVY-------- 487
            +  M  RGL P+ I + ++ID +C+               G  I  +V+ Y        
Sbjct: 299 TIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYG 358

Query: 488 ------------ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
                       E M++  +KPN++ Y S+IN LCKD  +  A+ +L+     G+L +A 
Sbjct: 359 RLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNAN 418

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN LI+G    GK+ EA   F EM   GI    V YN LI  LCK G  ++A E+  ++
Sbjct: 419 IYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI 478

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              G  PD +TY +L++ +S   + ++ +EL++ M   G+ P   T++ +IS
Sbjct: 479 TSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLIS 530



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 161/604 (26%), Positives = 274/604 (45%), Gaps = 59/604 (9%)

Query: 79  EFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDS 138
           E Y ++ +  R   S      IV  LV  ++FD+ L L   ++       L F       
Sbjct: 17  ELYDFMRQEGRLP-SFGYVRMIVESLVESKKFDNVLDLFKEMVG------LGF------- 62

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
               +    V+   + A  ++G  + A ++ + +K +    ++  +N  +  L K   I 
Sbjct: 63  ----RPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIR 118

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
              KL+ EM     V N  TFN +I   CK  +++ A+ L  RM K  + P+++ FN ++
Sbjct: 119 DAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLL 178

Query: 259 NEACQVGDLE------------------------------------FALKLFRKMGVMSG 282
           +  C+   +E                                     AL L+R+     G
Sbjct: 179 SGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE---AIG 235

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             V  ++ T + ++NG CK G+VE AEE+  ++++ G+      Y T+++GY + G  + 
Sbjct: 236 KGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDR 295

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+   ++M  RGL PN + +NS I        ++ A   +  M+ K I P   TY+IL  
Sbjct: 296 AILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILID 355

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G  R     + F++  ++ E     +  SY  LIN LCK   +  A+ +L  M+ RG++P
Sbjct: 356 GYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLP 415

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +   Y  LIDG C  G +  A++ ++ M K      +V YNS+I GLCK   L  A+ + 
Sbjct: 416 NANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475

Query: 523 QASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                 G   D ITYN+LI+GY   G   +   ++  M+ +G+      ++ LI+   K 
Sbjct: 476 FLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKE 535

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  +    L   M+   + PD V Y  ++  + +    ++   L  +MV  GV PDN+TY
Sbjct: 536 G-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTY 594

Query: 642 NAII 645
           N++I
Sbjct: 595 NSLI 598



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 236/458 (51%), Gaps = 11/458 (2%)

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +++E+  F +    + S GYV       +++ +L +  K +  L L+  M+  G  P+ +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVR------MIVESLVESKKFDNVLDLFKEMVGLGFRPDKL 67

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +   +  A ++GDL+ A++LF     M    V+PN   +N +I G CK  R+  AE++ 
Sbjct: 68  VYGRAMLAAVKLGDLKLAMELFE---TMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLF 124

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M    +  N  T+ TLIDGY + G  + A+ L + M K  + P+ + +NS +  L   
Sbjct: 125 GEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKA 184

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR-NGCVKQAFKLHNQVLEEHMVGDAYS 431
             +E A  +L+++      PD FTYSI+  GL + +     A  L+ + + + +  D Y+
Sbjct: 185 RRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYT 244

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            +IL+N LCK   +  A+++L S++  GL+P  + Y T+++GYC+ G+++ A+   E M+
Sbjct: 245 CSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQME 304

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIA 550
               +PN + +NS+I+  C+   +D A+  ++     G+  ++ TYN LI+GY      +
Sbjct: 305 SRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFS 364

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             F +  EM   G   N + Y  LIN LCK G   +A  +++ M+  G++P+   Y  L+
Sbjct: 365 RCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLI 424

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                     E +   D+M  +G+     TYN++I  L
Sbjct: 425 DGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGL 462



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 196/374 (52%), Gaps = 6/374 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F++++    ++   + A + ++K+  KG + S+  +N  +    +L    R +++ +EM 
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   NV ++  +I  LCK+ K+ EA  +   M+  G+ PN   +NM+I+ +C VG L 
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL+ F +M   S + +    VT+N +I G CK+G+++ AEE+ + +   G   +V TY 
Sbjct: 435 EALRFFDEM---SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYN 491

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG-DVEGALFVLSDMID 387
           +LI GY+  G+S++ L L + M K GL P    ++  I     EG  ++  LF  ++M+ 
Sbjct: 492 SLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLF--NEMLQ 549

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            ++ PD   Y+ +       G V++AF L  ++++  +  D  +YN LI    K   L+ 
Sbjct: 550 MNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSE 609

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            K L+  M  +GLIP+  TY  LI G+C   +  GA   Y  M +    PN+ I N +  
Sbjct: 610 TKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELST 669

Query: 508 GLCKDASLDAAKSL 521
           GL KD  L  A+S+
Sbjct: 670 GLRKDGRLQEAQSI 683



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 41/242 (16%)

Query: 415 KLHNQVLE--EHMVGD----AYSY-NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           K+H+QV E  + M  +    ++ Y  +++  L +S        L   M+  G  PD + Y
Sbjct: 10  KMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVY 69

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
           G  +    K G+++ A++++E MK+ +  PN+ +YN                        
Sbjct: 70  GRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYN------------------------ 105

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
                      LI G     +I +A  +F EM    +  N+V +N LI+  CK G    A
Sbjct: 106 ----------VLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVA 155

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             L + M    + P  +T+ +L++   K    EE   + +++  +G  PD  TY+ I   
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215

Query: 648 LL 649
           LL
Sbjct: 216 LL 217



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 1/173 (0%)

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
           ++Y+ M++  + P+      I+  L +    D    L +    +G   D + Y   +   
Sbjct: 17  ELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAA 76

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G +  A  +F  M+   +  N   YN+LI  LCK    + A +L   M +  ++P+ 
Sbjct: 77  VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           VT+ TL+  + K    +  I L + M    V P   T+N+++S L   +  E+
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEE 189


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 182/727 (25%), Positives = 301/727 (41%), Gaps = 146/727 (20%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL 104
            +  K L Q    L  +LV  V+S   K+P+L ++F+ W G    + H+     A++ +L
Sbjct: 114 HKTQKFLRQFREKLNETLVVDVLS-LVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVL 172

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
                              N   P +FL  + D  E  +    + + L+R C + G    
Sbjct: 173 G---------------CGGNDRVPEQFLREIRD--EDKEILGKLLNVLIRKCCRNGLWNV 215

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A + + +LK  G+  S   +N  +   ++ + +   + +++EM   G+  +  T    ++
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVH 275

Query: 225 ALCK--------------ECKL------------------EEALSLYYRMLKSGIWPNVV 252
            LCK              E KL                  EEA+    RM  S   PNVV
Sbjct: 276 LLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 253 C-----------------------------------FNMIINEACQVGDLEFALKLFRKM 277
                                               FN +I+  C+ GD  +A KL +KM
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 278 GVMSGDSVLPNSVTHNCIINGFC------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           G        P  V +N +I G C       L  +E AE+    M+ A +  N    + L 
Sbjct: 396 GDCG---CQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A  +  EM+ +G +P+   Y+  I  L     V+ A  +  +M   H+ 
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD FTY+IL    C+ G ++QA K  ++++ +    +  +Y  LI+   K+  +++A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK------------KVE----K 495
              M+  G IP+++TY  LIDG+CK G IE A Q+Y  M+            K++    +
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  Y ++++GLCK   +  A+ LL      G   + I Y+ LI+G+   GK+ EA  
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692

Query: 555 MFSEMRNVG-----------------------------------IAVNKVGYNILINFLC 579
           +F++M   G                                    A N + Y  +I+ LC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A  LM +M   G  P+ VTYT ++  F K    ++ +EL   M   G +P+  
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 640 TYNAIIS 646
           TY  +I+
Sbjct: 813 TYRVLIN 819



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 243/519 (46%), Gaps = 28/519 (5%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L R     G  E AY +I+++  KG       ++  +  L   +++   + L++EM S  
Sbjct: 451 LARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH 510

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            V +V T+ ++I + CK   L++A   +  M++ G  PNVV +  +I+   +   +  A 
Sbjct: 511 VVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSAN 570

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--------- 322
           +LF    +M  +  +PN VT+  +I+G CK G++E A +I YA ++   D          
Sbjct: 571 ELFE---MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQI-YARMRGNADIPDVDMYFKI 626

Query: 323 --------NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
                   N+ TY  L+DG  +    +EA  L D M   G  PN++VY++ I      G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  V + M ++   P+ +TYS L   L ++  +  A K+ +++LE     +   Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +I+ LCK      A +L+S M  +G  P+++TY  +IDG+ K G ++  +++   M    
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             PN V Y  +IN  C    LD A  LL +  Q         Y  +I G+  N +   + 
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISL 864

Query: 554 AMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM--ILHGIIPDYVTYTTLV 610
            +  E+  NV + +    Y ILI+  CK G  + A EL K M         D   Y++L+
Sbjct: 865 GLLDEIAENVAVPIIP-AYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLI 923

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              S     ++  EL+ DM+  G  P+   +  ++  L+
Sbjct: 924 ESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLI 962



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 44/343 (12%)

Query: 135 LLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD  S E C+    V+DAL+    ++G  + A  V  K+  +G+  +++ +++ +  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K   +    K+   M+      NV  +  +I  LCK  K +EA  L   M + G  PNVV
Sbjct: 718 KDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVV 777

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+   + G ++  L+L R+MG        PN VT+  +IN  C  G ++ A ++ 
Sbjct: 778 TYTAMIDGFGKAGKVDKCLELMRQMG---AKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +     ++  Y  +I+G+ R      +L L DE+ +   +P               
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGFNR--EFIISLGLLDEIAENVAVP--------------- 877

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--LEEHMVGDAY 430
                            I P    Y IL    C+ G ++ A +LH  +     +   D  
Sbjct: 878 -----------------IIP---AYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKD 917

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            Y+ LI  L  ++ +  A +L + MI RG IP++  +  L+ G
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKG 960



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 45/326 (13%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    R G    AL     +   G  P+ + YN+ +        ++ A  V  +M D  
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSG 262

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
              D +T       LC+ G  ++A  L   + +E    D   Y  +I+ LC+++    A 
Sbjct: 263 FNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEEAM 319

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             LS M     IP+++TY  L+ G  +   +    ++   M      P+  I+NS+I+  
Sbjct: 320 DFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAY 379

Query: 510 CKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAE------AFAMFSEMRNV 562
           C+      A  LL+     G     + YN LI G   N K+        A   + EM + 
Sbjct: 380 CRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDA 439

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            + +NKV  + L   LC  G +++A  +++ M+  G IP                     
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIP--------------------- 478

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
                         D  TY+ +I  L
Sbjct: 479 --------------DTSTYSKVIGLL 490


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/602 (25%), Positives = 278/602 (46%), Gaps = 45/602 (7%)

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL 135
           LALE++  +  +  F H+  +   ++  L + R  D    L+  +           LEG+
Sbjct: 58  LALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMK----------LEGI 107

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
             S ++       F +++ +  + G++E A     +++      ++  +N+ L  L+  N
Sbjct: 108 SCSEDL-------FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDEN 160

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
                  +Y  M   G   NV T+N+++ ALCK  +++ A  L   M   G  P+ V + 
Sbjct: 161 RFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYT 220

Query: 256 MIINEACQVGDLEFALKL---------------------------FRKMGVMSGDSVLPN 288
            +I+  C++G ++ A +L                           F+ +  M    + PN
Sbjct: 221 TLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            +++  IIN     G VE +  +   M   G   N+ T+ +LI G+   G S EAL   D
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M++ G++PN V YN+ +H L ++  +  A+ V + M     CP+  TYS L  G  + G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            +  A ++ N ++      +  +Y  +++ LC+++    A  L+ +M V    P+ +T+ 
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           T I G C  G ++ A++V++ M      PN   YN +++ L KD     A  L++  +  
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+ L+ +TYNT+I GY   G + EA  +  +M   G   + +  NI+I+  CK G    A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            +LM  +      PD + YT+L++    +   EE I     M+  G+SP+  T+N ++  
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640

Query: 648 LL 649
           L 
Sbjct: 641 LF 642



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 3/376 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  ++ A +  G  E +  V+ K+  +G S ++H + + +               +  M+
Sbjct: 284 YTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMI 343

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G V NV  +N +++ LC +  L +A+S++ +M  +G  PNV  ++ +I+   + GDL+
Sbjct: 344 REGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLD 403

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +++  M +  G    PN V + C+++  C+      A  +   M       N  T+ 
Sbjct: 404 GASEVWNWM-ITHG--CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T I G    G  + A+++ D+M   G  PN   YN  +  L  +     A  ++ DM  +
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I  +  TY+ +  G C  G + +A +L  +++      DA + NI+I+  CK   +  A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            QL+  +      PDII Y +LI G C    +E A+     M      PN+  +N ++  
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640

Query: 509 LCKDASLDAAKSLLQA 524
           L  +     A   L A
Sbjct: 641 LFSNMGHSGAVQFLDA 656



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 180/424 (42%), Gaps = 25/424 (5%)

Query: 84  VGENNRFSHSLESSCAIVHLLVNW----RRFDDALLLMGNLMS----ANSVSPLEFLEGL 135
           V E    + S   S  + + L+N       F++A  L+  +M+     N +S    +  L
Sbjct: 232 VKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 136 LDSYEI--------------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
            D+  +              C      F +L++     G +  A D   ++  +G   ++
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
            A+N  +  L     +G    ++ +M   G   NV T++ +I    K   L+ A  ++  
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M+  G  PNVV +  +++  C+      A  L   M V   ++  PN+VT N  I G C 
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV---ENCPPNTVTFNTFIKGLCG 468

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GRV++A ++   M  +G   N  TY  L+D   +     EA  L  +M  RG+  N V 
Sbjct: 469 SGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVT 528

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I+     G +  AL +L  M+ +   PD  T +I+    C+ G V  A +L +++ 
Sbjct: 529 YNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLS 588

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                 D  +Y  LI+ +C    +  A   L  M+  G+ P++ T+  L+          
Sbjct: 589 AGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHS 648

Query: 482 GAVQ 485
           GAVQ
Sbjct: 649 GAVQ 652



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 156/346 (45%), Gaps = 5/346 (1%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           L+ G  +   S   L+F + ++   E        ++AL+       +   A  V  ++++
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIR--EGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G   ++  ++  +    K  ++    +++  M++ G   NV  +  ++  LC+     +
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L   M      PN V FN  I   C  G +++A+K+F +MG        PN+ T+N 
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG---NSGCFPNTTTYNE 496

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +++   K  R   A  +   M   GI+ N+ TY T+I GY   G   EAL L  +MV RG
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+ +  N  I     +G V  A+ ++  +      PD   Y+ L  G+C +  V++A 
Sbjct: 557 TKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAI 616

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               ++L E +  +  ++N+L+ +L  +   + A Q L +++  G 
Sbjct: 617 VYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGF 662



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 6/300 (2%)

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHI-CPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           + Y   I  L +E +++   ++L  M  + I C +    S++     R G  +QA K   
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI-GSYRRAGSSEQALKTFY 135

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ +  +      YN +++ L   N       + S+M   G+ P++ TY  L+   CK  
Sbjct: 136 RMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNN 195

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
            ++GA ++   M      P+ V Y ++I+ LCK   +  A+ L  +           YN 
Sbjct: 196 RVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTP----SVPVYNA 251

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LING        EAF +  EM N GI  N + Y  +IN L   G  + +  ++  M   G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             P+  T+T+L+  F       E ++  D M+  GV P+   YNA++  L  ++S  D V
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/622 (25%), Positives = 303/622 (48%), Gaps = 29/622 (4%)

Query: 12  SNSPLSRAFHVGKQFANPSTEDIVF-----RAICVNLRQRKWKILEQMAPSLTN---SLV 63
           +N  LS+AF    + +NP+    +        I   L +   K LE  +  L+N      
Sbjct: 2   ANQKLSQAF----KRSNPTIPTSILSQEIAEKITKILIKSGLKPLETKSSLLSNLDSYTT 57

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRF---SHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
           N V+S      +  L F+  + +N         L +   ++  L   R+F    ++M N+
Sbjct: 58  NLVLSNPNLPTRSCLNFFKCLQKNQSLICHKPDLRAHVILISRLFKARKF----VVMKNV 113

Query: 121 MSANSV------SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           ++  ++      S  +F+  + + +   K    + D L R        E  + V   +  
Sbjct: 114 LTCYAMDKNLRCSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVH 173

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G  +   +    L  L + +++      +K+MV       V +  +VI  LCK+ ++E 
Sbjct: 174 NGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVER 233

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L   M   GI PNVV +N ++N   ++ D E   ++ R   +M  D V+ N+ T+  
Sbjct: 234 AKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLR---LMEMDKVVYNAATYTL 290

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I  +   G++  AE++   M++ G++ ++  + ++I    + G+ + A  L DE+ +RG
Sbjct: 291 LIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERG 350

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L+ N   Y + IH     G ++ A  ++++M  + +  +   ++ L  G C+ G + +A 
Sbjct: 351 LVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEAL 410

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           ++ + + ++    D ++YN +   LCK N    AK+ L +M+ +G+ P+ +++  +ID +
Sbjct: 411 RMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIH 470

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           CK GN+  A +V+++MKK  +KPN+V YN++I+G  K   L  A  L    + IG+  D 
Sbjct: 471 CKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDI 530

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TY TL++G  + GK+ EA  + +E+   G+A++ V Y  +I+ L K G  ++A  L   
Sbjct: 531 YTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDE 590

Query: 594 MILHGIIPDYVTYTTLVTRFSK 615
           M+  G+ PD   YT+LV    K
Sbjct: 591 MMAAGLTPDDRVYTSLVANLHK 612



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/433 (30%), Positives = 221/433 (51%), Gaps = 18/433 (4%)

Query: 232 LEEALSLYYRMLKSGIWPN----VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
            EE   ++  M+ +G+  +    +VC  + +  + Q   +  +L  F+KM     D  + 
Sbjct: 161 FEEGFKVFDYMVHNGLKIDDRSCIVCL-LALKRSDQ---MVMSLGFFKKMVEFKVDVTV- 215

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE---EAL 344
              +   +I+G CK GRVE A+++   M   GI  NV TY TL++ Y +    E   E L
Sbjct: 216 --YSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEML 273

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           RL  EM K  ++ N   Y   I W  + G +  A  V   M+++ +  D   ++ +    
Sbjct: 274 RLM-EMDK--VVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQ 330

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G +K+AF L +++ E  +V +A++Y  LI+  C S  L AA+ L++ M  +GL  ++
Sbjct: 331 CKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNL 390

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           + + TLI+GYCK G I+ A+++ + M+K   + ++  YN+I  GLCK    + AK  L  
Sbjct: 391 VIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFT 450

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G+  +A+++  +I+ +   G + EA  +F +M+  G   N V YN LI+   K G 
Sbjct: 451 MVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGK 510

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A  L   M   G+  D  TYTTLV         EE + L +++   G++    TY A
Sbjct: 511 LKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTA 570

Query: 644 IISPLLGEKSAED 656
           IIS L  E  +E+
Sbjct: 571 IISGLSKEGRSEE 583



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 151/331 (45%), Gaps = 38/331 (11%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A +  L+      G    A  V +K+  +G    IH + + +S   KL  + R + L+ E
Sbjct: 286 ATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDE 345

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +   G V N +T+  +I+  C   +L+ A  L   M   G+  N+V FN +IN  C+ G 
Sbjct: 346 LNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGM 405

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID----- 321
           ++ AL   R   VM       +  T+N I  G CKL R E A+   + M++ G+D     
Sbjct: 406 IDEAL---RMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVS 462

Query: 322 --------C----------------------NVRTYATLIDGYARGGSSEEALRLCDEMV 351
                   C                      NV TY TLIDGY++ G  +EA RL DEM 
Sbjct: 463 FTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEME 522

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G+  +   Y + +H     G VE AL +L+++  K +     TY+ +  GL + G  +
Sbjct: 523 SIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSE 582

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           +AF+L+++++   +  D   Y  L+  L K+
Sbjct: 583 EAFRLYDEMMAAGLTPDDRVYTSLVANLHKT 613


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 248/477 (51%), Gaps = 9/477 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           GH+V   + N  L  L +LN       L++  ++   + N  T+ ++I        L+ A
Sbjct: 19  GHNV--FSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIA 76

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           + L   M  SG   N V    ++   C  G +  AL+ FR M         P+ +T+  +
Sbjct: 77  IQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA----KDCAPDVMTYTAL 132

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++  CK G+ + A+ +   M+  G   +  T++TLIDG  + GS E+A R+ +++++RG+
Sbjct: 133 VHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGM 192

Query: 356 MPNNVVYNSTIHWLFAE-GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             ++  + + I  L  +   VE A  VL  +I K   P    ++++  G C+   +  A+
Sbjct: 193 GNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAY 252

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           KL   ++E+  V + +++ ILI  LCK+N +  A+QLL  M++ G  P+++TY T+I+G 
Sbjct: 253 KLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGL 312

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           CK G ++ A ++++ M++    PN+V +N +I+GLCK   ++ A+ L    +  G   D 
Sbjct: 313 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDI 372

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGI-AVNKVGYNILINFLCKFGCYQQARELMK 592
           ITYN+LI+G   + ++ EAF +F  +   G+ A N V Y+ L +     G    A  +  
Sbjct: 373 ITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFS 432

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +++  G  PD  TYT+L+  + K     EV+EL ++M   G  P   T +A++  L 
Sbjct: 433 MLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLF 489



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 273/570 (47%), Gaps = 31/570 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK--------------- 143
           A+VH L    +FD+A  ++  +++            L+D   +CK               
Sbjct: 131 ALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDG--LCKFGSEEQAFRVLEDVI 188

Query: 144 -----ATPAVFDALV-RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
                 + A F+ ++ R C +  + E A  V+  +  KG + ++  +N  ++   K  ++
Sbjct: 189 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDL 248

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
              +KL + M+  G V NV TF ++I  LCK  ++ EA  L  +M+  G  PNVV ++ +
Sbjct: 249 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTV 308

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           IN  C+ G ++ A +LF+   +M   +  PN VTHN +I+G CK  R+E A ++ + M +
Sbjct: 309 INGLCKQGQVDDAYELFQ---LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 365

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL-MPNNVVYNSTIHWLFAEGDVE 376
            G   ++ TY +LIDG  +    +EA +L   + + G+   N V Y++  H   A G + 
Sbjct: 366 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 425

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  + S ++DK   PD  TY+ L    C+     +  +L  ++  +       + + ++
Sbjct: 426 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 485

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN-MKKVEK 495
             L + N+   A QL  SM  RG   D + Y  +++G  +    + A+ V E  + K ++
Sbjct: 486 GGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDR 545

Query: 496 K--PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEA 552
           K  P+    ++++  LC+    D AK LL      G   A+ +YN L++G     +  EA
Sbjct: 546 KFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEA 605

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F  M + G A      N++I++LC       A EL++ M   G  PD  T  TL+  
Sbjct: 606 TQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG 665

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
           + K+   +   +L ++M  +G+ P++ T++
Sbjct: 666 YCKSGRADLARKLLEEMTEAGLEPNDTTHD 695



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 208/414 (50%), Gaps = 7/414 (1%)

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           E + L++   +S +  NV   N  ++  C++   + AL LFR          +PN  T+ 
Sbjct: 5   ELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRN---AMARICMPNKFTYG 61

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I GF   G ++ A ++   M  +G + N   + TL+ G    G   EAL     M K 
Sbjct: 62  ILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK- 120

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
              P+ + Y + +H L   G  + A  +L +M+ +   PD  T+S L  GLC+ G  +QA
Sbjct: 121 DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLC-KSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           F++   V++  M     ++  +I  LC K N++  A ++L  +I +G  P ++ +  +I+
Sbjct: 181 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 240

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G+CK  +++ A ++ E M +    PN+  +  +I GLCK   +  A+ LL+     G   
Sbjct: 241 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSP 300

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +TY+T+ING    G++ +A+ +F  M       N V +NILI+ LCK    ++AR+L 
Sbjct: 301 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 360

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ-TYNAI 644
             M   G  PD +TY +L+    K+   +E  +L   +  SGVS  N  TY+ +
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 160/336 (47%), Gaps = 3/336 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV +    +D   R    +EAL L    + R  MPN   Y   I    + GD++ A+ +L
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M       +   ++ L KGLC  G V +A + H + + +    D  +Y  L++ LCK+
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALE-HFRAMAKDCAPDVMTYTALVHALCKA 139

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                A+ +L  M+ +G  PD +T+ TLIDG CK G+ E A +V E++ +     +   +
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 503 NSIINGLC-KDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
            +II  LC K  S++ A  +L      G    +  +N +ING+     +  A+ +   M 
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G   N   + ILI  LCK     +A++L++ M++ G  P+ VTY+T++    K    +
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  EL   M      P+  T+N +I  L   K  E+
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 302/639 (47%), Gaps = 50/639 (7%)

Query: 28  NPSTEDIVFRAICVNLRQRKW---KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWV 84
           N +TE   F  I   + +  W   K L+ +A  +T  L  +++     + +L + F+ WV
Sbjct: 35  NQTTEGTAFH-ISNLINKPNWEHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWV 93

Query: 85  GENNRFSHSLESSCAIVHLLVNWRRFDDA-----LLLMGNLMSANSVSPLEFLEGLLDSY 139
              + + + L+    ++ +LV+   F  A     LL+     S N V  L          
Sbjct: 94  CRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKL---------- 143

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
                              +GA +G  ++       G  +S   ++  L  L KLN    
Sbjct: 144 -------------------MGALDGMTEL-------GFRLSYPCYSTLLMCLAKLNMGFV 177

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV-VCFNMII 258
            + +Y+ MV+ G+V     +  V+ ALCK   ++ A     ++L+ G   +  VC ++++
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              C+  DL  A ++F KM     ++  PNSVT++ +I+G C+ GR+E A +++  M++ 
Sbjct: 238 AN-CRRDDLGEAFRVFEKMS--KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   + RTY  LI      G +++A+++ DEM  +  +PN   Y   I  L  EG +E A
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             V   M+   +CP   T++ L  G C+ G V  AF+L + + + +   +  +YN L+  
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LC+ +    A  LL  ++  GL+PD +TY  L+DG+CK G +  A  ++ +M     +P+
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
              + ++I+GLCK   L+ A  +L +  + G+ LD +T+  LI+G+   GK  +   +F 
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 534

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            M           +N  ++ L K     +A  ++  M+ +G++P  VT+T L+    +  
Sbjct: 535 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 594

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                +++ + M  +G SP+  TY  II+ L      E+
Sbjct: 595 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 633



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 257/573 (44%), Gaps = 60/573 (10%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C+     +  L+    + G  E A+ + Q++  KG   S   +   +     +    +
Sbjct: 259 ENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDK 318

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             K+  EM +   V NV+T+ ++I  LC+E K+EEA  ++ +MLK G+ P ++ FN +IN
Sbjct: 319 AMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALIN 378

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G   + +  F+ + VM   +  PN  T+N ++ G C++ +   A  +   ++  G
Sbjct: 379 GYCKEG---WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +  TY  L+DG+ + G    A  + + M   GL P+   + + I  L   G +E A 
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L  M+ K I  D  T++ L  G C+ G  K    L   ++E   +  A+++N  ++ L
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 555

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K   L  A  +L  M+  GL+P ++T+  LI+G+C+ G    ++++ E MK+    PN+
Sbjct: 556 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 615

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             Y  IINGLC +  ++ A+++L +    G+  +  TY  L+  +   G++  AF + S 
Sbjct: 616 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 675

Query: 559 MRNVGIAVNKVGYNILI------------------------------------------- 575
           M   G   N   Y+ L+                                           
Sbjct: 676 MVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKC 735

Query: 576 --------NFL----CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
                   NFL    CK G   +A +L + M+ HG+ PD    ++++  + K C  +  +
Sbjct: 736 GVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCL 794

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           E    ++ +   P   +Y  +I  L  E   ++
Sbjct: 795 EFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQE 827


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 251/496 (50%), Gaps = 7/496 (1%)

Query: 164 GAYDVIQKLKVKG---HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
           G  D    L  +G   H++ +  WN  ++   ++ +      +   M + G   +V  +N
Sbjct: 149 GQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYN 208

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            ++   C+  +++ A  +   M ++G+ PNV  +   I   C+   +E A  L+  M V 
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM-VR 267

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +G  VL + VT + ++ G C+ GR   A  +   M K G   N  TY TLID  A+ G  
Sbjct: 268 NG--VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRG 325

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +E L L  EMV RG++ + V Y + + WL  +G  +     L   +  ++  +  TY++L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVL 385

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              LC+   V +A ++  ++ E+ +  +  +++ +IN   K   L  A +    M  RG+
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P+++TYGTLIDG+ K    + A++VY +M     + N  I +S++NGL ++  ++ A +
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMA 505

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L + +   GL LD + Y TLI+G F  G +  AF    E+ +  +  + V YN+ IN LC
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLC 565

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G +++A+ ++  M   G+ PD  TY T++    +     + ++L  +M +S + P+  
Sbjct: 566 ILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLI 625

Query: 640 TYNAIISPLLGEKSAE 655
           TYN +++ L G  + E
Sbjct: 626 TYNTLVAGLFGTGAVE 641



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 243/502 (48%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              ALV    + G    AY + +++   G   +   +   +  L K         L  EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G V ++ T+  ++  L K+ K +E        L   +  N V + ++I+  C+  ++
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNV 395

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M      S+ PN VT + +INGF K G ++ A E +  M + GI+ NV TY
Sbjct: 396 DEAEQVLLEM---EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG+ +    + AL +  +M+  G+  N  + +S ++ L   G +E A+ +  D   
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  DH  Y+ L  GL + G +  AFK   ++++ +M+ DA  YN+ IN LC       
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKE 572

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK +L+ M   GL PD  TY T+I  +C+ G    A+++   MK    KPNL+ YN+++ 
Sbjct: 573 AKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL    +++ AK LL      G    ++T+  ++     + ++     +   M N G+  
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN L+  LC  G  ++A  +++ M+  GI PD +T+  L+    K+   +     +
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
             M+   +SP+  T+N ++  L
Sbjct: 753 AQMLHQNISPNIATFNTLLGGL 774



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 236/498 (47%), Gaps = 4/498 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F +++    + G  + A +  + +K +G + ++  +   +    K        ++Y +M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N    + ++  L +  K+EEA++L+     SG+  + V +  +I+   + GD+
Sbjct: 476 LCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A K  +++      ++LP++V +N  IN  C LG+ + A+ I   M   G+  +  TY
Sbjct: 536 PTAFKFGQEL---MDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTY 592

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I  + R G + +AL+L  EM    + PN + YN+ +  LF  G VE A ++L++M+ 
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P   T+  + +   ++  +     +H  ++   +  D   YN L+  LC       
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+  G+ PD IT+  LI G+CK  +++ A   Y  M      PN+  +N+++ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL     +  A ++L   ++ GL  + +TY+ L+ G+       EA  ++ EM   G   
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               YN LI+   K G   QA+EL K M   G+ P   TY  LV+ +S+  +  EV +  
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL 892

Query: 627 DDMVLSGVSPDNQTYNAI 644
            DM   G SP   T + I
Sbjct: 893 KDMKEKGFSPSKGTLSFI 910



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 15/302 (4%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           R   P  V YN     L A  D   A  VL++M  + +  D  T + L  GLCRNG V  
Sbjct: 97  RSSRPTTVAYNI---LLAALSDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDA 153

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  L ++    H + D   +N LI   C+  +  AA  +   M  +GL  D++ Y TL+ 
Sbjct: 154 AAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LL 531
           G+C+ G ++ A  V + MK+    PN+  Y   I   C+   ++ A  L +   R G LL
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D +T + L+ G   +G+ +EA+A+F EM  VG   N V Y  LI+ L K G  ++   L+
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE-----LHDDMVLSGVSPDNQTYNAIIS 646
             M+  G++ D VTYT L+    K    +EV +     L D++ L+GV     TY  +I 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGV-----TYTVLID 387

Query: 647 PL 648
            L
Sbjct: 388 AL 389



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 174/394 (44%), Gaps = 15/394 (3%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N ++   C++  L  A+ L R        S  P +V +N ++     L     A  +  
Sbjct: 76  LNALLYSHCRLRLLRPAIALLR--------SSRPTTVAYNILL---AALSDHAHAPAVLA 124

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV-YNSTIHWLFAE 372
            M K G+  +  T  TL+ G  R G  + A  L D     G+   +V+ +N+ I      
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRV 182

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           GD   AL V   M  + +  D   Y+ L  G CR G V  A  + + + E  +  +  +Y
Sbjct: 183 GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATY 242

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              I Y C++  +  A  L   M+  G++ D++T   L+ G C+ G    A  ++  M K
Sbjct: 243 TPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDK 302

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
           V   PN V Y ++I+ L K        SLL +   R  ++D +TY  L++     GK  E
Sbjct: 303 VGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
                    +  +++N V Y +LI+ LCK     +A +++  M    I P+ VT+++++ 
Sbjct: 363 VKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVIN 422

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            F K    ++  E    M   G++P+  TY  +I
Sbjct: 423 GFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 3/351 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K   + ++ ++ +  + G T  A  ++ ++K+     ++  +N  ++ L     + +   
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EMVS G+  +  T   V+ A  +  +L+  L ++  M+ +G+  ++  +N ++   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G    A  +  +M    G  + P+++T N +I G CK   ++ A      M+   I  
Sbjct: 706 YHGMTRKATVVLEEM---LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISP 762

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+ T+ TL+ G    G   EA  +  EM K GL PNN+ Y+  +     + +   A+ + 
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLY 822

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ K   P   TY+ L     + G + QA +L   + +  +   + +Y+IL++   + 
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            N    K+ L  M  +G  P   T   +   + K G    A ++ +N+ +V
Sbjct: 883 RNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 179/415 (43%), Gaps = 38/415 (9%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G    A+   Q+L  +        +N F++ L  L +      +  EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMR 581

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   + +T+N +I + C++ +  +AL L + M  S I PN++ +N ++      G +E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L  +M V +G S  P+S+TH  ++    +  R++   +I   M+ AG+  ++  Y 
Sbjct: 642 KAKYLLNEM-VSAGFS--PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI---------------------- 366
           TL+      G + +A  + +EM+  G+ P+ + +N+ I                      
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 367 -------------HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
                          L + G +  A  VL +M    + P++ TY IL  G  +     +A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEA 818

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L+ +++ +  V    +YN LI+   K+  +  AK+L   M  RG+ P   TY  L+ G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           + +  N     +  ++MK+    P+    + I     K      A+ LL+   R+
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 8/221 (3%)

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  S N L+   C+   L  A  LL     R   P  + Y  L+       +   A  V 
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSDHAH---APAVL 123

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFING 547
             M K     + V  N+++ GLC++  +DAA +L      I  LD I +NTLI GY   G
Sbjct: 124 AEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVG 183

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
               A ++   M   G+ ++ VGYN L+   C+ G    AR ++ +M   G+ P+  TYT
Sbjct: 184 DTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYT 243

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +  + +    EE  +L++ MV +GV  D  T +A+++ L
Sbjct: 244 PFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGL 284



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 10/201 (4%)

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           A A   L++  +R    D  +   L+  +C+   +  A+ +  +      +P  V YN +
Sbjct: 55  ALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRS-----SRPTTVAYNIL 109

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI- 564
           +  L   A   A   L +  +R    D +T NTL+ G   NG++  A A+    R  GI 
Sbjct: 110 LAALSDHAHAPAV--LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALAD--RGGGIH 165

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           A++ +G+N LI   C+ G    A  +   M   G+  D V Y TLV  F +    +    
Sbjct: 166 ALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARG 225

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           + D M  +GV P+  TY   I
Sbjct: 226 VLDMMKEAGVDPNVATYTPFI 246


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 302/639 (47%), Gaps = 50/639 (7%)

Query: 28  NPSTEDIVFRAICVNLRQRKW---KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWV 84
           N +TE   F  I   + +  W   K L+ +A  +T  L  +++     + +L + F+ WV
Sbjct: 12  NQTTEGTAFH-ISNLINKPNWEHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWV 70

Query: 85  GENNRFSHSLESSCAIVHLLVNWRRFDDA-----LLLMGNLMSANSVSPLEFLEGLLDSY 139
              + + + L+    ++ +LV+   F  A     LL+     S N V  L          
Sbjct: 71  CRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKL---------- 120

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
                              +GA +G  ++       G  +S   ++  L  L KLN    
Sbjct: 121 -------------------MGALDGMTEL-------GFRLSYPCYSTLLMCLAKLNMGFV 154

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV-VCFNMII 258
            + +Y+ MV+ G+V     +  V+ ALCK   ++ A     ++L+ G   +  VC ++++
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              C+  DL  A ++F KM     ++  PNSVT++ +I+G C+ GR+E A +++  M++ 
Sbjct: 215 AN-CRRDDLGEAFRVFEKMS--KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   + RTY  LI      G +++A+++ DEM  +  +PN   Y   I  L  EG +E A
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             V   M+   +CP   T++ L  G C+ G V  AF+L + + + +   +  +YN L+  
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LC+ +    A  LL  ++  GL+PD +TY  L+DG+CK G +  A  ++ +M     +P+
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
              + ++I+GLCK   L+ A  +L +  + G+ LD +T+  LI+G+   GK  +   +F 
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            M           +N  ++ L K     +A  ++  M+ +G++P  VT+T L+    +  
Sbjct: 512 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 571

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                +++ + M  +G SP+  TY  II+ L      E+
Sbjct: 572 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 610



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 218/438 (49%), Gaps = 4/438 (0%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C+     +  L+    + G  E A+ + Q++  KG   S   +   +     +    +
Sbjct: 236 ENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDK 295

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             K+  EM +   V NV+T+ ++I  LC+E K+EEA  ++ +MLK G+ P ++ FN +IN
Sbjct: 296 AMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALIN 355

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G   + +  F+ + VM   +  PN  T+N ++ G C++ +   A  +   ++  G
Sbjct: 356 GYCKEG---WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +  TY  L+DG+ + G    A  + + M   GL P+   + + I  L   G +E A 
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L  M+ K I  D  T++ L  G C+ G  K    L   ++E   +  A+++N  ++ L
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 532

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K   L  A  +L  M+  GL+P ++T+  LI+G+C+ G    ++++ E MK+    PN+
Sbjct: 533 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 592

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             Y  IINGLC +  ++ A+++L +    G+  +  TY  L+  +   G++  AF + S 
Sbjct: 593 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 652

Query: 559 MRNVGIAVNKVGYNILIN 576
           M   G   N   Y+ L++
Sbjct: 653 MVKNGCQPNSHIYSALLS 670



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 134/557 (24%), Positives = 256/557 (45%), Gaps = 51/557 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ +   +  L++A   IG T+ A  ++ ++  K    ++H +   +  L +  +I    
Sbjct: 273 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEAN 332

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKE-------------------------------- 229
            ++++M+  G    + TFN +I   CKE                                
Sbjct: 333 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 392

Query: 230 CKLEE---ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C++ +   A  L  R++ +G+ P+ V +N++++  C+ G L  A  +F  M   +   + 
Sbjct: 393 CRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM---NSAGLE 449

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+  T   +I+G CKLGR+E A  I  +M+K GI  +  T+  LIDG+ + G +++   L
Sbjct: 450 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 509

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            + MV+   +     +N  +  L  +  +  A  +L  M+   + P   T++IL +G CR
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G    + K+  ++ +     + Y+Y I+IN LC +  +  A+ +L SM   G+ P+  T
Sbjct: 570 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 629

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  L+  + K G ++ A Q+   M K   +PN  IY+++++G     +   A++L     
Sbjct: 630 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL----S 685

Query: 527 RIGLLDAITY-------NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             G LDA +        N L +  F    +  A  +  E++  G+    + YN L+  LC
Sbjct: 686 STGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLC 744

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A +L + M+ HG+ PD    ++++  + K C  +  +E    ++ +   P   
Sbjct: 745 KEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFA 803

Query: 640 TYNAIISPLLGEKSAED 656
           +Y  +I  L  E   ++
Sbjct: 804 SYCWVIHGLRNEGRVQE 820


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 247/490 (50%), Gaps = 6/490 (1%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D+ +++++KG + +++  +  ++   +  ++   +    +++  GY  +  TF+ +I  L
Sbjct: 93  DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C E ++ EAL L  RM++ G  P ++  N ++N  C  G +  A+ L  +M V +G    
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETG--FQ 209

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN VT+  ++   CK G+   A E+   M +  I  +   Y+ +IDG  + GS + A  L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EM  +G   + ++Y + I      G  +    +L DMI + I PD   +S L     +
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +++A +LH ++++  +  D  +Y  LI+  CK N L  A  +L  M+ +G  P+I T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--A 524
           +  LI+GYCK   I+  ++++  M       + V YN++I G C+   L+ AK L Q   
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           S+R+   D ++Y  L++G   NG+  +A  +F ++    + ++   YNI+I+ +C     
Sbjct: 450 SRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             A +L   + L G+ PD  TY  ++    K  S  E   L   M   G SP+  TYN +
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568

Query: 645 ISPLLGEKSA 654
           I   LGE  A
Sbjct: 569 IRAHLGEGDA 578



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 247/527 (46%), Gaps = 28/527 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L+      G    A +++ ++   GH  ++   N  ++ L    ++     L   M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+  N  T+  V+  +CK  +   A+ L  +M +  I  + V +++II+  C+ G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  LF +M +    +   + + +  +I GFC  GR +   ++   MIK  I  +V  +
Sbjct: 264 DNAFNLFNEMEIKGFKA---DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LID + + G   EA  L  EM++RG+ P+ V Y S I     E  ++ A  +L  M+ 
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  T++IL  G C+   +    +L  ++    +V D  +YN LI   C+   L  
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK+L   M+ R + PDI++Y  L+DG C  G  E A++++E ++K + + ++ IYN II+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G+C  + +D A  L  +    G+  D  TYN +I G    G ++EA  +F +M   G + 
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 567 NKVGYNILIN----------------------FLCKFGCYQQARELMKVMILHGIIPDYV 604
           N   YNILI                       F       + A   +  M+  G  PD  
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVF 620

Query: 605 TYTTLVTRF--SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           T+TTL+  F   +N S  +   L  +M   G  P+  TYN +I  LL
Sbjct: 621 TFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLL 667



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 216/455 (47%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++EM        +  F+ +   + +  + +  L L  +M   GI  N+   +++IN  C
Sbjct: 59  LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  A   F  MG +      P++VT + +ING C  GRV  A E+   M++ G   
Sbjct: 119 RCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            + T   L++G    G   +A+ L D MV+ G  PN V Y   +  +   G    A+ +L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M ++ I  D   YSI+  GLC++G +  AF L N++  +    D   Y  LI   C +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                  +LL  MI R + PD++ +  LID + K G +  A ++++ M +    P+ V Y
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
            S+I+G CK+  LD A  +L      G    I T+N LINGY     I +   +F +M  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  + V YN LI   C+ G  + A+EL + M+   + PD V+Y  L+     N  PE+
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E+ + +  S +  D   YN II  +      +D
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 233/487 (47%), Gaps = 4/487 (0%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A D+ Q++        +  ++   S + +  +      L K+M   G   N+ T +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I   C+  KL  A S   +++K G  P+ V F+ +IN  C  G +  AL+L  +M  M  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               P  +T N ++NG C  G+V  A  +   M++ G   N  TY  ++    + G +  
Sbjct: 174 K---PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+ L  +M +R +  + V Y+  I  L  +G ++ A  + ++M  K    D   Y+ L +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C  G      KL   +++  +  D  +++ LI+   K   L  A++L   MI RG+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D +TY +LIDG+CK   ++ A  + + M      PN+  +N +ING CK   +D    L 
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +     G++ D +TYNTLI G+   GK+  A  +F EM +  +  + V Y IL++ LC  
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  ++A E+ + +    +  D   Y  ++         ++  +L   + L GV PD +TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530

Query: 642 NAIISPL 648
           N +I  L
Sbjct: 531 NIMIGGL 537



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 219/444 (49%), Gaps = 28/444 (6%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KA   ++  L+R     G  +    +++ +  +  +  + A++  +   VK  ++    +
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+KEM+  G   +  T+  +I   CKE +L++A  +   M+  G  PN+  FN++IN  C
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++  L+LFRKM +     V+ ++VT+N +I GFC+LG++E A+E+   M+   +  
Sbjct: 399 KANLIDDGLELFRKMSLR---GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ +Y  L+DG    G  E+AL + +++ K  +  +  +YN  IH +     V+ A  + 
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN----- 437
             +  K + PD  TY+I+  GLC+ G + +A  L  ++ E+    +  +YNILI      
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575

Query: 438 -----------------YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC--KGG 478
                            +   ++ L  A   L+ M+  G  PD+ T+ TL+  +C  +  
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENA 635

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYN 537
           ++  A  +++NMK +  KPN+V YN++I GL     +     +L Q  +R    +A+T +
Sbjct: 636 SVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKS 695

Query: 538 TLINGYFINGKIAEAFAMFSEMRN 561
           T I+G         A  +  +M N
Sbjct: 696 TFISGLCKQDLHGSAILLLRKMEN 719



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 158/340 (46%), Gaps = 13/340 (3%)

Query: 320 IDCNVRTYATLIDGYA--------RGG----SSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           + C  R ++++ DG          R G      ++A+ L  EM +    P  + ++    
Sbjct: 21  LSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS 80

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            +      +  L +   M  K I  + +T SI+    CR   +  AF    ++++     
Sbjct: 81  VVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +++ LIN LC    ++ A +L+  M+  G  P +IT   L++G C  G +  AV + 
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFIN 546
           + M +   +PN V Y  ++  +CK      A  LL+   +R   LDA+ Y+ +I+G   +
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G +  AF +F+EM   G   + + Y  LI   C  G +    +L++ MI   I PD V +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + L+  F K     E  ELH +M+  G+SPD  TY ++I 
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 152/337 (45%), Gaps = 18/337 (5%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ L+    +    +   ++ +K+ ++G       +N  +    +L ++    
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L++EMVS     ++ ++ +++  LC   + E+AL ++ ++ KS +  ++  +N+II+  
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    ++ A  LF  + +     V P+  T+N +I G CK G +  A+ +   M + G  
Sbjct: 503 CNASKVDDAWDLFCSLPL---KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY  LI  +   G + ++ +L +E+ + G      V  ST+ +         AL  
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF----SVDASTLRF---------ALST 606

Query: 382 LSDMIDKHICPDHFTYSILTKGLC--RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
           L+ M+     PD FT++ L +  C   N  V  A  L   +       +  +YN +I  L
Sbjct: 607 LARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGL 666

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
              N ++    +L  M  RG  P+ +T  T I G CK
Sbjct: 667 LNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCK 703



 Score = 42.7 bits (99), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 3/148 (2%)

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +D ++D  + + ++  R  L+D   ++ L +      +      +  +M   GIA N   
Sbjct: 53  EDDAVDLFQEMTRSRPRPRLID---FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
            +I+IN  C+      A   M  +I  G  PD VT++TL+          E +EL D MV
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             G  P   T NA+++ L       D V
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAV 197


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 260/537 (48%), Gaps = 13/537 (2%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA---CTQIGATEG---AYDV 168
            L+  L+ AN V   EF+  + +  +    +P ++   +     C+ +G   G   A  +
Sbjct: 287 FLLKCLVEANRV---EFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVI 343

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + K+   G   ++  ++ ++  L K+  +     L + +       N ++FN VIY  CK
Sbjct: 344 LGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCK 403

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             ++ EAL +   M  SGI P+V  ++++IN  C  GD+   +K    M  M    + P+
Sbjct: 404 RGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDV---MKCLDLMEEMEHSQIKPS 460

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            V++  +I+G CK   ++ A +I +++  +    +   Y TLIDG+   G  + A++L +
Sbjct: 461 IVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLE 520

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM+   L+P      S I   +  G  + AL V + M+   I PD    + +  G CR G
Sbjct: 521 EMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAG 580

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
             K+A  L     E     + +SYN +I  LCK      A +LL  M+ R ++P ++ Y 
Sbjct: 581 YFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYS 640

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLI G+ K  N + AV ++  M KV    N+  Y  +++       +  A  + +  +  
Sbjct: 641 TLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKER 700

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL LD I+Y TLI G+  N ++ +A+A+F EM   G + N + Y  +I+  CK      A
Sbjct: 701 GLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLA 760

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             +   M    +IPD VTYT L+  + K+   ++  +L+D M   GV PD+ T+N +
Sbjct: 761 TWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 269/592 (45%), Gaps = 12/592 (2%)

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL-VNWRRFDDALLLMGNL 120
           LV+RV      S     +F  WV E + FSHS+     IVH   +   R +   LL   +
Sbjct: 161 LVSRVFKSLSWSVARKKKFGNWV-ECHGFSHSISCFRIIVHAFALAGMRLEVWALLRDIV 219

Query: 121 MSANSV--SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
              N       E     LDS +  + +  VFD L+         E A DV    K  G  
Sbjct: 220 GFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLE 279

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE----CKLEE 234
             I   N  L  LV+ N +    ++++E+   G   N+ T+ +++   C +      + +
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  +  ++ +SG  P VV ++  I+  C+VG++E AL L R +   +      NS + N 
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPL---NSHSFND 396

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I GFCK G V  A ++   M  +GI  +V +Y+ LI+ +   G   + L L +EM    
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P+ V Y S IH L  +  ++ A+ +   +       D   Y  L  G C  G +  A 
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           KL  +++   +V  A+S   LI    K      A ++ ++M+  G+ PD I    ++DG 
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGS 576

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDA 533
           C+ G  + A+ + E+ ++     N   YN+II  LCK+   + A  LL +  +R  L   
Sbjct: 577 CRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSV 636

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + Y+TLI+G+        A  +F+ M  VGI  N   Y IL++         +A  + K 
Sbjct: 637 VNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKE 696

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           M   G+  D ++YTTL+  F  N   ++   L ++M   G SP+  TY  II
Sbjct: 697 MKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCII 748



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 200/433 (46%), Gaps = 8/433 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+++I        LE AL ++      G+ P++   N ++    +   +EF  ++F ++ 
Sbjct: 250 FDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELK 309

Query: 279 VMSGDSVLPNSVTHNCIINGFCKL----GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
              G S  PN  T+  ++N +C        +  A  I   + ++G    V TY+T I G 
Sbjct: 310 D-RGPS--PNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGL 366

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G+ E AL L   +       N+  +N  I+     G+V  AL VL +M    I PD 
Sbjct: 367 CKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDV 426

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           ++YSIL    C  G V +   L  ++    +     SY  LI+ LCK N L  A  +  S
Sbjct: 427 YSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHS 486

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           +       D   Y TLIDG+C  G+++ A+++ E M   E  P      S+I G  K   
Sbjct: 487 IGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGL 546

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
            D A  +  A  R G+  D I  N +++G    G   EA  +  + +  G  +N   YN 
Sbjct: 547 FDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNA 606

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I  LCK G  ++A EL+  M+   ++P  V Y+TL++ F+K  + +  + L   MV  G
Sbjct: 607 IIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVG 666

Query: 634 VSPDNQTYNAIIS 646
           ++ +  TY  ++S
Sbjct: 667 ITFNIATYTILMS 679



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 171/385 (44%), Gaps = 15/385 (3%)

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           S   V  + V  + +I+ F     +E A ++       G++ ++RT   L+         
Sbjct: 239 SPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRV 298

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV------EGALFVLSDMIDKHICPDH 394
           E   R+ +E+  RG  PN  +Y  TI   F   DV        A  +L  +      P  
Sbjct: 299 EFVRRVFEELKDRGPSPN--IYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTV 356

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TYS    GLC+ G V+ A  L   +   +   +++S+N +I   CK   +  A Q+L  
Sbjct: 357 VTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEE 416

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G++PD+ +Y  LI+ +C  G++   + + E M+  + KP++V Y S+I+GLCK   
Sbjct: 417 MKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNM 476

Query: 515 LDAAKSLLQASQRIGL----LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           L  A  +  +   IG      D+  Y TLI+G+ + G +  A  +  EM    +      
Sbjct: 477 LQNAVDIFHS---IGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFS 533

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
              LI    K G + QA E+   M+  GI PD +    ++    +    +E + L +D  
Sbjct: 534 CRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQ 593

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
             G + +  +YNAII  L  E   E
Sbjct: 594 EHGFNLNPHSYNAIIYKLCKEGYPE 618



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 120/265 (45%), Gaps = 12/265 (4%)

Query: 403 GLCRNGCVKQAFKLHNQVLE--EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
           G C N      F+L +  L+  +H+      +++LI+    ++ L  A  + S+    GL
Sbjct: 220 GFC-NEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGL 278

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PDI T   L+    +   +E   +V+E +K     PN+  Y  ++N  C D   DA   
Sbjct: 279 EPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG-- 336

Query: 521 LLQASQRIGLL-------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           + QA+  +G +         +TY+T I+G    G +  A  +   +      +N   +N 
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I   CK G   +A ++++ M   GI+PD  +Y+ L+  F       + ++L ++M  S 
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 634 VSPDNQTYNAIISPLLGEKSAEDQV 658
           + P   +Y ++I  L  +   ++ V
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAV 481


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 241/473 (50%), Gaps = 35/473 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+ ++N+ LS L K+    + + LY +M   G   +  T N+++  LC   +L E  + +
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +L+ G  PN+V +N +I   C    +  A +LF +M  +      P+ VT+  +I G 
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG---CTPDVVTYGTLIKGL 184

Query: 300 CKLGRVEFAEEIRYAMI----KAGIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           C  G +  A ++   M+    +  I+C  NV TY  ++DG  + G  +EA +L +EM  +
Sbjct: 185 CGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQ 244

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G++PN                         +M+D+ + PD  T+++L   LC+ G V +A
Sbjct: 245 GMIPN-------------------------EMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 279

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            KL   ++E  +V D  +YN LI   C   +L +A++L  SM  +G  PD+I+Y  LI+G
Sbjct: 280 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 339

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD- 532
           Y K   +E A+++Y  M  V K+PN++ Y+S++ G+     +D AK L    +  G+ + 
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + TY   ++G   N  + EA  +F+E+++    +     N LI+ LCK G  + A EL +
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 459

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            +   G  P+ VTYT ++  F +    ++   L   M  +G +PD  TYN ++
Sbjct: 460 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 512



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 242/499 (48%), Gaps = 51/499 (10%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            TP++  F+ L+    +I      + +  ++++ G S      N  L+ L  +N +   +
Sbjct: 65  PTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGF 124

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             +  ++  GY  N+ T+N +I  LC E ++ EA  L+ RM K G  P+VV +  +I   
Sbjct: 125 AAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGL 184

Query: 262 CQVGDLEFALKLFRKM-GVMSGDSV--LPNSVTHNCIINGFCKLGRVEFAEE-------- 310
           C  G++  ALKL ++M   +S   +   PN +T+N I++G CK+GR + A++        
Sbjct: 185 CGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQ 244

Query: 311 --IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             I   M+  G+  ++ T+  LID   + G   EA +L   M++ G++P+ V YNS I  
Sbjct: 245 GMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 304

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ--------- 419
               GD+  A  +   M  K   PD  +Y++L  G  +   V++A KL+N+         
Sbjct: 305 FCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 364

Query: 420 -------------------------VLEEHMVGD-AYSYNILINYLCKSNNLAAAKQLLS 453
                                    V++ H + + +Y+Y I ++ LCK++ L  A +L +
Sbjct: 365 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFT 424

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            +       +I     LIDG CK G +E A +++E +     +PN+V Y  +I+G C++ 
Sbjct: 425 ELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 484

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  L+Q  +  G   D ITYNTL+ G++ + K+ E   +   M    ++ + +  +
Sbjct: 485 QVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCS 544

Query: 573 ILINFLCKFGCYQQARELM 591
           I+++ L K   YQ+   L+
Sbjct: 545 IVVDMLSKDEKYQECLHLL 563



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 218/431 (50%), Gaps = 29/431 (6%)

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           S N V+    ++GL   + I +AT          CT    T G         +KG   + 
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTL-------IKGLCGTG 188

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           +       H   LN+I R+       ++C    NV T+N+++  LCK  + +EA  L+  
Sbjct: 189 NINIALKLHQEMLNDISRYE------INCK--PNVITYNIIVDGLCKVGREDEAKQLFEE 240

Query: 242 M----------LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           M          L  G+ P++V FN++I+  C+ G +  A KL   +GVM    ++P+ VT
Sbjct: 241 MKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL---LGVMIESGIVPDLVT 297

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I GFC +G +  A E+  +M   G + +V +Y  LI+GY++    EEA++L +EM+
Sbjct: 298 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 357

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G  PN + Y+S +  +F  G V+ A  + S M    I  + +TY I   GLC+N C+ 
Sbjct: 358 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A KL  ++   +   +  + N LI+ LCK+  L  A +L   +   G  P+++TY  +I
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGL 530
            G+C+ G ++ A  + + M+     P+++ YN+++ G  +   L+    LL + +Q+   
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537

Query: 531 LDAITYNTLIN 541
            DAIT + +++
Sbjct: 538 PDAITCSIVVD 548



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 192/431 (44%), Gaps = 55/431 (12%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           AL  ++ M++S   P++  FN +++   ++        L+ +M  +SG S   +  T N 
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMR-LSGLS--SDRCTLNI 109

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++N  C + R+                          +G+A              +++RG
Sbjct: 110 LLNCLCNVNRLR-------------------------EGFAAFAG----------ILRRG 134

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             PN V YN+ I  L  E  +  A  +   M      PD  TY  L KGLC  G +  A 
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194

Query: 415 KLHNQVL------EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI------- 461
           KLH ++L      E +   +  +YNI+++ LCK      AKQL   M  +G+I       
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQ 254

Query: 462 ---PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
              PD++T+  LID  CK G +  A ++   M +    P+LV YNS+I G C    L++A
Sbjct: 255 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 314

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + L  +    G   D I+YN LINGY    K+ EA  +++EM  VG   N + Y+ L+  
Sbjct: 315 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 374

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           +   G    A++L  VM  HGI  +  TY   +    KN    E ++L  ++  S    +
Sbjct: 375 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 434

Query: 638 NQTYNAIISPL 648
            +  N +I  L
Sbjct: 435 IENLNCLIDGL 445



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 140/281 (49%), Gaps = 17/281 (6%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  T +IL   LC    +++ F     +L      +  +YN LI  LC  + ++ A +L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM------KKVEKKPNLVIYNSII 506
             M   G  PD++TYGTLI G C  GNI  A+++++ M       ++  KPN++ YN I+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-----------DAITYNTLINGYFINGKIAEAFAM 555
           +GLCK    D AK L +  +  G++           D +T+N LI+     GK+ EA  +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
              M   GI  + V YN LI   C  G    AREL   M   G  PD ++Y  L+  +SK
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 342

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               EE ++L+++M+L G  P+  TY++++  +      +D
Sbjct: 343 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 383



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 17/171 (9%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           +A+ L   L S+N    +E L  L+D   +CKA               G  E A+++ +K
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDG--LCKA---------------GKLETAWELFEK 460

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L  +GH  ++  +   +    +  ++ +   L ++M + G   ++ T+N ++    +  K
Sbjct: 461 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 520

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           LEE + L +RM +  + P+ +  +++++   +    +  L L  +  +  G
Sbjct: 521 LEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKG 571


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 231/432 (53%), Gaps = 6/432 (1%)

Query: 80  FYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLL 136
           F+TW+    N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L
Sbjct: 1   FFTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAIL 60

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           ++    ++   VF  ++ A  + G    A +  +  K     V        L HL+KL  
Sbjct: 61  ETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKY 120

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
               W  Y+E + CGY  ++  FN+++++ CKE ++  A S++  + K G+ P+VV FN 
Sbjct: 121 FKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNT 180

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           ++N   ++GDL    + FR    M    V P+  T++ +ING CK  +++   E+   M+
Sbjct: 181 LMNGYIKLGDLN---EXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEML 237

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L P+ V YN+ I+ L  +GD++
Sbjct: 238 DXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLK 297

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  ++ +M  K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI
Sbjct: 298 QAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALI 357

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + LC+      A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    
Sbjct: 358 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYV 417

Query: 497 PNLVIYNSIING 508
           P++V YN ++NG
Sbjct: 418 PSVVTYNVLMNG 429



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 155/285 (54%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY + G   E  RL   M  
Sbjct: 144 NILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQA 203

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++    +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 204 SGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDL 263

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 264 AMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 323

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +    M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 324 GSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 383

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            I TY  +IN +   G +     +  EM+  G   + V YN+L+N
Sbjct: 384 EIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMN 428



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 147/286 (51%), Gaps = 1/286 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L   + 
Sbjct: 143 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQ 202

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +    +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVD 262

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+LV YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 263 LAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 322

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 323 DGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           P+  TYT ++  F K        +L  +M   G  P   TYN +++
Sbjct: 383 PEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMN 428



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 122 KLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 181

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G++    ++ + M+    +P++  Y+ +INGLCK++ +D    L       GL
Sbjct: 182 MNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGL 241

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + V YN LI  LCK G  +QA++
Sbjct: 242 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQD 301

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 302 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLC 361

Query: 650 GEKSAED 656
            E  + D
Sbjct: 362 QEGRSVD 368


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 239/481 (49%), Gaps = 6/481 (1%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K+ V G    +  +N  +  L + +++     + ++M S G V +  TF  ++    +E 
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238

Query: 231 KLEEALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            L+ AL +  +M++ G  W NV   N+I++  C+ G +E AL   ++M   + D   P+ 
Sbjct: 239 DLDGALRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFIQEMS--NQDGFFPDQ 295

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T N ++NG CK G V+ A EI   M++ G D +V TY ++I G  + G  +EA+   D+
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQ 355

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+ R   PN V YN+ I  L  E  VE A  +   +  K I PD  T++ L +GLC    
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            + A +L  ++  +    D ++YN+LI+ LC    L  A  +L  M + G    +ITY T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+CK   I  A ++++ M+      N V YN++I+GLCK   ++ A  L+      G
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D  TYN+L+  +   G I +A  +   M + G   + V Y  LI+ LCK G  + A 
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG-VSPDNQTYNAIISP 647
           +L++ + + GI      Y  ++    +     E I L  +M+     +PD  +Y  +   
Sbjct: 596 KLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRG 655

Query: 648 L 648
           L
Sbjct: 656 L 656



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 247/485 (50%), Gaps = 5/485 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G     H +N  L+ LV  N +      + +M   G   +V+TFN++I ALC+  +L  A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           + +   M   G+ P+   F  I+    + GDL+ AL++  +M V  G S   ++V+ N I
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQM-VEFGCSW--SNVSVNVI 265

Query: 296 INGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++GFCK GRVE A      M  + G   +  T+ TL++G  + G  + A+ + D M++ G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+   YNS I  L   G+V+ A+  L  MI +   P+  TY+ L   LC+   V++A 
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L   +  + ++ D  ++N LI  LC + N   A +L   M  +G  PD  TY  LID  
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           C  G ++ A+ + + M+      +++ YN++I+G CK   +  A+ +    +  G+  ++
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNS 505

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYNTLI+G   + ++ +A  +  +M   G   +K  YN L+   C+ G  ++A ++++ 
Sbjct: 506 VTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQA 565

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M  +G  PD VTY TL++   K    E   +L   + + G++     YN +I  L  ++ 
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRK 625

Query: 654 AEDQV 658
             + +
Sbjct: 626 TTEAI 630



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 193/412 (46%), Gaps = 20/412 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           IVH      R +DAL  +  + + +   P        D Y         F+ LV    + 
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFP--------DQY--------TFNTLVNGLCKA 308

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +++  +  +G+   ++ +N+ +S L KL E+    +   +M++     N  T+
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTY 368

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I  LCKE ++EEA  L   +   GI P+V  FN +I   C   +   A++LF +   
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE--- 425

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M      P+  T+N +I+  C  G+++ A  +   M  +G   +V TY TLIDG+ +   
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  + DEM   G+  N+V YN+ I  L     VE A  ++  MI +   PD FTY+ 
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNS 545

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L    CR G +K+A  +   +       D  +Y  LI+ LCK+  +  A +LL S+ ++G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNLVIYNSIINGLC 510
           +      Y  +I G  +      A+ ++  M ++ E  P+ V Y  +  GLC
Sbjct: 606 IALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLC 657



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 141/290 (48%), Gaps = 5/290 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++L++          A ++ ++++ KG       +N  +  L    ++     + K+M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +V T+N +I   CK  K+ EA  ++  M   G+  N V +N +I+  C+   +
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A +L  +M +M G    P+  T+N ++  FC+ G ++ A +I  AM   G + ++ TY
Sbjct: 522 EDASQLMDQM-IMEGQK--PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI G  + G  E A +L   +  +G+      YN  I  LF +     A+ +  +M++
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 388 KH-ICPDHFTYSILTKGLCR-NGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           ++   PD  +Y I+ +GLC   G +++A     ++LE+  V +  S  +L
Sbjct: 639 QNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 258/543 (47%), Gaps = 28/543 (5%)

Query: 66  VVSEFRKSPKLALEFYTWVGENNRFSHSL-ESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
            +S  R SP LA E Y  + E    SH+   +S A +H L    R      L+ + +   
Sbjct: 51  TLSLLRLSPGLASELYALIAEP---SHAFTPASLASLHSLAARHRIPPPSALLLSKLVRR 107

Query: 125 SVSPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
             SP E    L DS       P  ++F++L+ A  + G   G  ++   ++       + 
Sbjct: 108 FSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVV 167

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCG--YVENVNTFNLVIYALCKECKLEEALSLYY 240
            +   L+ L K   +G   K+   M S G     ++   N V+  LCK  +L++A+    
Sbjct: 168 TYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVD 227

Query: 241 RMLKS--GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             ++   G  PN V +N + +  C+VGD+  A K+  +M     + V PN +T N II G
Sbjct: 228 ERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARM---EKEGVAPNVITMNTIIGG 284

Query: 299 FCKLGRV----EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            C++GRV    EF  E R    +A    N  TY+TL   +    + + A+ L  EM   G
Sbjct: 285 LCRVGRVGAALEFFREKRTVWPEA--RGNAVTYSTLASAFLHCNNVDMAMELFHEMADHG 342

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+ V+Y + I  L   G +  A    + M       D   Y+IL  G CR   + +A+
Sbjct: 343 HRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAY 402

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L  ++    +  D Y+YN L++ LCK+ + +A  +LL  MI  G  P ++T+GTL+ GY
Sbjct: 403 ELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGY 462

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           CK G  + A++++ +M +   +PN VIYN++I+ LCK   +D A  L    +   +  + 
Sbjct: 463 CKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANV 522

Query: 534 ITYNTLINGYFINGKIAE-AFAMFSEMRNVGIAVNKVGYNILINFLCKFG------CYQQ 586
            TYN L+ G   + K+AE AF +   MR      N V  ++L+ +L + G      C+ Q
Sbjct: 523 TTYNALLKG-LQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQ 581

Query: 587 ARE 589
            R+
Sbjct: 582 QRD 584



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 208/461 (45%), Gaps = 18/461 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   + S     +++ FN ++ AL +   L     L+  M  + + P+VV + +++N  C
Sbjct: 118 LRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLC 177

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA-----EEIRYAMIK 317
           + G +  ALK+  +M    G  V P+    N +++G CK+GR++ A     E +R+    
Sbjct: 178 KSGHVGDALKVLDRMSS-PGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVH-- 234

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G   N  TY  L D + R G    A ++   M K G+ PN +  N+ I  L   G V  
Sbjct: 235 -GCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGA 293

Query: 378 ALFVLSDMIDKHICPDH----FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           AL    +   + + P+      TYS L         V  A +L +++ +     DA  Y 
Sbjct: 294 ALEFFRE--KRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYF 351

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +I+ L ++  L  A    +SM   G   D   Y  LI G+C+   +  A ++ E MK V
Sbjct: 352 TMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGV 411

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEA 552
             +P++  YN++++GLCK     A   LL      G   ++ T+ TL++GY   GK  EA
Sbjct: 412 GLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEA 471

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F  M    I  N V YN LI+FLCK      A +L   M    +  +  TY  L+  
Sbjct: 472 LRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKG 531

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS--PLLGE 651
                  E+  EL D M     +P+  T + ++   P +GE
Sbjct: 532 LQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGE 572



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 198/430 (46%), Gaps = 11/430 (2%)

Query: 234 EALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           EA       L SG   P++  FN ++    + G+L    +LF  M      SV P+ VT+
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSM---RDASVKPDVVTY 169

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSSEEALRLCDEM 350
             ++NG CK G V  A ++   M   G D   ++    T++DG  + G  ++A+   DE 
Sbjct: 170 GILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDER 229

Query: 351 VKR--GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           ++   G  PN V YN         GD+  A  +++ M  + + P+  T + +  GLCR G
Sbjct: 230 MRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVG 289

Query: 409 CVKQAFKL--HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            V  A +     + +     G+A +Y+ L +     NN+  A +L   M   G  PD + 
Sbjct: 290 RVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVM 349

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y T+I G  + G +  A     +MKK   K +   YN +I G C+   L  A  LL+  +
Sbjct: 350 YFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMK 409

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            +GL  D  TYNTL++G    G  +    +   M + G   + V +  L++  CK G   
Sbjct: 410 GVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTD 469

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  + + M    I P+ V Y TL+    K+   +  I+L D+M    V  +  TYNA++
Sbjct: 470 EALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALL 529

Query: 646 SPLLGEKSAE 655
             L  +K AE
Sbjct: 530 KGLQDKKMAE 539


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 247/490 (50%), Gaps = 6/490 (1%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D+ +++++KG + +++  +  ++   +  ++   +    +++  GY  +  TF+ +I  L
Sbjct: 93  DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C E ++ EAL L  RM++ G  P ++  N ++N  C  G +  A+ L  +M V +G    
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETG--FQ 209

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN VT+  ++   CK G+   A E+   M +  I  +   Y+ +IDG  + GS + A  L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EM  +G   + ++Y + I      G  +    +L DMI + I PD   +S L     +
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +++A +LH ++++  +  D  +Y  LI+  CK N L  A  +L  M+ +G  P+I T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--A 524
           +  LI+GYCK   I+  ++++  M       + V YN++I G C+   L+ AK L Q   
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           S+R+   D ++Y  L++G   NG+  +A  +F ++    + ++   YNI+I+ +C     
Sbjct: 450 SRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             A +L   + L G+ PD  TY  ++    K  S  E   L   M   G SP+  TYN +
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568

Query: 645 ISPLLGEKSA 654
           I   LGE  A
Sbjct: 569 IRAHLGEGDA 578



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 216/455 (47%), Gaps = 4/455 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++EM        +  F+ +   + +  + +  L L  +M   GI  N+   +++IN  C
Sbjct: 59  LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  A   F  MG +      P++VT + +ING C  GRV  A E+   M++ G   
Sbjct: 119 RCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            + T   L++G    G   +A+ L D MV+ G  PN V Y   +  +   G    A+ +L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M ++ I  D   YSI+  GLC++G +  AF L N++  +    D   Y  LI   C +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                  +LL  MI R + PD++ +  LID + K G +  A ++++ M +    P+ V Y
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
            S+I+G CK+  LD A  +L      G    I T+N LINGY     I +   +F +M  
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  + V YN LI   C+ G  + A+EL + M+   + PD V+Y  L+     N  PE+
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E+ + +  S +  D   YN II  +      +D
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 244/498 (48%), Gaps = 4/498 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           ++  C +      A+  + K+   G+      ++  ++ L     +    +L   MV  G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +   + T N ++  LC   K+ +A+ L  RM+++G  PN V +  ++   C+ G    A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L RK   M    +  ++V ++ II+G CK G ++ A  +   M   G   ++  Y TLI
Sbjct: 233 ELLRK---MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G+   G  ++  +L  +M+KR + P+ V +++ I     EG +  A  +  +MI + I 
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  TY+ L  G C+   + +A  + + ++ +    +  ++NILIN  CK+N +    +L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M +RG++ D +TY TLI G+C+ G +E A ++++ M     +P++V Y  +++GLC 
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +   + A  + +  ++  + LD   YN +I+G     K+ +A+ +F  +   G+  +   
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YNI+I  LCK G   +A  L + M   G  P+  TY  L+          +  +L +++ 
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589

Query: 631 LSGVSPDNQTYNAIISPL 648
             G S D  T   ++  L
Sbjct: 590 RCGFSVDASTVKMVVDML 607



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 228/468 (48%), Gaps = 4/468 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L+      G    A +++ ++   GH  ++   N  ++ L    ++     L   M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+  N  T+  V+  +CK  +   A+ L  +M +  I  + V +++II+  C+ G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  LF +M +    +   + + +  +I GFC  GR +   ++   MIK  I  +V  +
Sbjct: 264 DNAFNLFNEMEIKGFKA---DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LID + + G   EA  L  EM++RG+ P+ V Y S I     E  ++ A  +L  M+ 
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  T++IL  G C+   +    +L  ++    +V D  +YN LI   C+   L  
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK+L   M+ R + PDI++Y  L+DG C  G  E A++++E ++K + + ++ IYN II+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G+C  + +D A  L  +    G+  D  TYN +I G    G ++EA  +F +M   G + 
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           N   YNILI      G   ++ +L++ +   G   D  T   +V   S
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 233/487 (47%), Gaps = 4/487 (0%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A D+ Q++        +  ++   S + +  +      L K+M   G   N+ T +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I   C+  KL  A S   +++K G  P+ V F+ +IN  C  G +  AL+L  +M  M  
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               P  +T N ++NG C  G+V  A  +   M++ G   N  TY  ++    + G +  
Sbjct: 174 K---PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+ L  +M +R +  + V Y+  I  L  +G ++ A  + ++M  K    D   Y+ L +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C  G      KL   +++  +  D  +++ LI+   K   L  A++L   MI RG+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D +TY +LIDG+CK   ++ A  + + M      PN+  +N +ING CK   +D    L 
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +     G++ D +TYNTLI G+   GK+  A  +F EM +  +  + V Y IL++ LC  
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  ++A E+ + +    +  D   Y  ++         ++  +L   + L GV PD +TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530

Query: 642 NAIISPL 648
           N +I  L
Sbjct: 531 NIMIGGL 537



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 210/407 (51%), Gaps = 5/407 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  +++   + G T  A ++++K++ +   +    ++  +  L K   +   + L+ EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G+  ++  +  +I   C   + ++   L   M+K  I P+VV F+ +I+   + G L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +L ++M +  G S  P++VT+  +I+GFCK  +++ A  +   M+  G   N+RT+
Sbjct: 334 REAEELHKEM-IQRGIS--PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI+GY +    ++ L L  +M  RG++ + V YN+ I      G +E A  +  +M+ 
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + PD  +Y IL  GLC NG  ++A ++  ++ +  M  D   YNI+I+ +C ++ +  
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  S+ ++G+ PD+ TY  +I G CK G++  A  ++  M++    PN   YN +I 
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
               +     +  L++  +R G  +DA T   +++    +G++ ++F
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD-MLSDGRLKKSF 616



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 169/335 (50%), Gaps = 3/335 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KA   ++  L+R     G  +    +++ +  +  +  + A++  +   VK  ++    +
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+KEM+  G   +  T+  +I   CKE +L++A  +   M+  G  PN+  FN++IN  C
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++  L+LFRKM +     V+ ++VT+N +I GFC+LG++E A+E+   M+   +  
Sbjct: 399 KANLIDDGLELFRKMSLR---GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ +Y  L+DG    G  E+AL + +++ K  +  +  +YN  IH +     V+ A  + 
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             +  K + PD  TY+I+  GLC+ G + +A  L  ++ E+    +  +YNILI      
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            +   + +L+  +   G   D  T   ++D    G
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 13/345 (3%)

Query: 320 IDCNVRTYATLIDGYA--------RGG----SSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           + C  R ++++ DG          R G      ++A+ L  EM +    P  + ++    
Sbjct: 21  LSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS 80

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            +      +  L +   M  K I  + +T SI+    CR   +  AF    ++++     
Sbjct: 81  VVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +++ LIN LC    ++ A +L+  M+  G  P +IT   L++G C  G +  AV + 
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFIN 546
           + M +   +PN V Y  ++  +CK      A  LL+   +R   LDA+ Y+ +I+G   +
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G +  AF +F+EM   G   + + Y  LI   C  G +    +L++ MI   I PD V +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + L+  F K     E  ELH +M+  G+SPD  TY ++I     E
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 103/214 (48%), Gaps = 3/214 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ L+    +    +   ++ +K+ ++G       +N  +    +L ++    
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L++EMVS     ++ ++ +++  LC   + E+AL ++ ++ KS +  ++  +N+II+  
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    ++ A  LF  + +     V P+  T+N +I G CK G +  A+ +   M + G  
Sbjct: 503 CNASKVDDAWDLFCSLPL---KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
            N  TY  LI  +   G + ++ +L +E+ + G 
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593



 Score = 42.7 bits (99), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 3/148 (2%)

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +D ++D  + + ++  R  L+D   ++ L +      +      +  +M   GIA N   
Sbjct: 53  EDDAVDLFQEMTRSRPRPRLID---FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
            +I+IN  C+      A   M  +I  G  PD VT++TL+          E +EL D MV
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             G  P   T NA+++ L       D V
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAV 197


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 178/725 (24%), Positives = 319/725 (44%), Gaps = 147/725 (20%)

Query: 49  KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           +   Q    L +SLV  V++   K+P+L ++F+ W G    +SH+ +             
Sbjct: 95  QFFRQFRNQLNDSLVVEVMNNV-KNPELCVKFFLWAGRQIGYSHTPQV------------ 141

Query: 109 RFDDALLLMGNLMSANSVSPLEFL-EGLLDSYEICKATPAVFDALVRACTQIGATEGAYD 167
            FD  L L+G  ++A+   PL+FL E   D +E+ +    + + LVR C + G    A +
Sbjct: 142 -FDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRR---LLNFLVRKCCRNGWWNMALE 197

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
            + +LK  G+  S   +N  +   ++ +++   + + +EM+S  +V +  T +   Y+LC
Sbjct: 198 ELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLC 257

Query: 228 K--ECK-------------------------------LEEALSLYYRMLKSGIWPNVVCF 254
           K  +C+                                EEA+ + +RM  S   PNVV +
Sbjct: 258 KGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTY 317

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            ++++   + G L    +  R + +M  +   PN    N +I+ +CK     +A ++   
Sbjct: 318 RILLSGCLRKGQLG---RCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKK 374

Query: 315 MIKAG--------------------------IDCNVRTYATLID-----------GYAR- 336
           MIK G                          +D   + Y+ ++D            +AR 
Sbjct: 375 MIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARC 434

Query: 337 ---GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
               G  ++A ++  EM+ +G +P++  Y+  I +L     VE A  +  +M    I P 
Sbjct: 435 LCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPS 494

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
            +TY+IL    C+ G ++QA K  +++L +    +  +Y  LI+   K+  +  A +L  
Sbjct: 495 VYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE 554

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK------------KVE----KKP 497
            M++ G  P+++TY  LIDG+CK G IE A Q+Y  M+            K++    + P
Sbjct: 555 MMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGP 614

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           N++ Y ++++GLCK   +  A  LL      G   + I Y+ +I+G+   GK+ +A  +F
Sbjct: 615 NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF 674

Query: 557 SEMRNVGIA-----------------------------------VNKVGYNILINFLCKF 581
           ++M   G +                                    N V Y  +++ LCK 
Sbjct: 675 TKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKI 734

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +A +LM  M   G  P+ VTYT ++  F K+   E+ +EL  DM   G +P+  TY
Sbjct: 735 GKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITY 794

Query: 642 NAIIS 646
             +I+
Sbjct: 795 RVLIN 799



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 226/492 (45%), Gaps = 36/492 (7%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+ + +++K  G   S++ +   +    K   I +  K + EM+  G   NV T+  +
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--GVM 280
           I+A  K  ++  A  L+  ML  G  PNVV +  +I+  C+ G +E A +++ +M   + 
Sbjct: 537 IHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIE 596

Query: 281 SGDSVL-----------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           S D              PN +T+  +++G CK  RV+ A E+   M+  G + N   Y  
Sbjct: 597 SSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDA 656

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +IDG+ + G  ++A  +  +M +RG  PN   Y+S I  LF +  ++  L VLS M++  
Sbjct: 657 VIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENS 716

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P+   Y+ +  GLC+ G   +A+KL  ++ E+    +  +Y  +I+   KS  +    
Sbjct: 717 CTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCL 776

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L   M  +G  P+ ITY  LI+  C  G ++ A ++ + MK+     +++ +  II G 
Sbjct: 777 ELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF 836

Query: 510 CKDASLDAAKSLLQASQRIGLLDAIT----------YNTLINGYFINGKIAEAFAMFSEM 559
            +           +    IGLLD ++          Y  LI+ Y   G++  A  +  E+
Sbjct: 837 SQ-----------EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI 885

Query: 560 RNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            +       NK  Y  LI  L       +A EL   MI   ++P+      L+    K  
Sbjct: 886 SSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVD 945

Query: 618 SPEEVIELHDDM 629
             +E ++L D +
Sbjct: 946 KWQEALQLSDSI 957



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 175/406 (43%), Gaps = 54/406 (13%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW-----NN-------- 186
           E CK     + AL+    + G  E A  +  +++    S  +  +     NN        
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVIT 618

Query: 187 ---FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
               +  L K N +    +L   M++ G   N   ++ VI   CK  KL++A  ++ +M 
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           + G  PN+  ++  I+   +   L+  LK+  KM     +S  PN V +  +++G CK+G
Sbjct: 679 ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKM---LENSCTPNVVIYTEMVDGLCKIG 735

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           + + A ++   M + G + NV TY  +IDG+ + G  E+ L L  +M  +G  PN + Y 
Sbjct: 736 KTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYR 795

Query: 364 STIHWLFAEGDVEGALFVLSDMID----KHI----------------------------- 390
             I+   + G ++ A  +L +M      KHI                             
Sbjct: 796 VLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENES 855

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINYLCKSNNLAAA 448
            P    Y IL     + G ++ A  L  ++     H V + Y Y  LI  L  ++ +  A
Sbjct: 856 VPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKA 915

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
            +L +SMI + ++P++     LI G  K    + A+Q+ +++ +++
Sbjct: 916 LELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMD 961



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 129/333 (38%), Gaps = 44/333 (13%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+    R G    AL     +   G  P+   YN+ I        ++ A  V  +M+   
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
              D +T S     LC+ G  ++AF L ++   E  V D   YN +++ LC+++    A 
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEEAM 299

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            +L  M     IP+++TY  L+ G  + G +    ++   M      PN  I+NS+I+  
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAY 359

Query: 510 CKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM------FSEMRNV 562
           CK      A  L +   + G     + YN  I     N +   +  +      +SEM ++
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDL 419

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+ +NKV  +     LC  G + QA +++  M+  G +P                     
Sbjct: 420 GVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVP--------------------- 458

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
                         D+ TY+ +I  L      E
Sbjct: 459 --------------DDSTYSKVIGFLCDASKVE 477


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 252/474 (53%), Gaps = 6/474 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  LS LVK N++     L+ +MV+     +V+TFN++I ALCK  +L  A+ +   M 
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+ P+   F  ++    +  D+E AL++ +++ V SG  +   SV+ N ++NG CK G
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRI-KELMVESGCEL--TSVSVNVLVNGLCKEG 283

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R+E  E +R+   + G   +  T+  L++G  R G  ++ L + D M+++G   +   YN
Sbjct: 284 RIE--EALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYN 341

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L   G+++ A+ +L  M+ +   P+  TY+ L   LC+   V+ A +L   +  +
Sbjct: 342 SLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSK 401

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            ++ D  ++N LI  LC ++N   A +L   M  +G  PD  TY  LI+  C    ++ A
Sbjct: 402 GVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEA 461

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
           + + + M+      N+V+YN++I+GLCK+  +  A+ +    + +G+   ++TYNTLING
Sbjct: 462 LMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLING 521

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              + ++ EA  +  +M   G+  +K  Y  ++ + C+ G  ++A ++++ M L+G  PD
Sbjct: 522 LCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPD 581

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            VTY TL+    K    +   +L   + + G+    Q YN +I  L   K  ++
Sbjct: 582 IVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKE 635



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 249/527 (47%), Gaps = 49/527 (9%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATP---AVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           L+ AN +  +E L     S  +  A P   + F+ L+RA  +      A  +++ +   G
Sbjct: 174 LVKANKLKLVETLH----SKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYG 229

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
                  +   +   ++  ++    ++ + MV  G      + N+++  LCKE ++EEAL
Sbjct: 230 LRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEAL 289

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
              Y   + G  P+ V FN ++N  C+ G ++  L++   M  M       +  T+N +I
Sbjct: 290 RFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEM---MDFMLEKGFELDVYTYNSLI 344

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +G CKLG ++ A EI + M+    + N  TY TLI    +    E A  L   +  +G++
Sbjct: 345 SGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVL 404

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+   +NS I  L    + E A+ +  +M +K   PD FTYSIL + LC    +K+A  L
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALML 464

Query: 417 ---------------HNQVLE----EHMVGDA----------------YSYNILINYLCK 441
                          +N +++     + VGDA                 +YN LIN LCK
Sbjct: 465 LKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCK 524

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S  +  A QL+  MI+ GL PD  TY T++  +C+ G+I+ A  + +NM     +P++V 
Sbjct: 525 SKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVT 584

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y ++I GLCK   +D A  LL++ Q  G+ L    YN +I       +  EA  +F EM 
Sbjct: 585 YGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMM 644

Query: 561 NVGIAVNKVGYNILINFLCK-FGCYQQARELMKVMILHGIIPDYVTY 606
             G   + + Y I+   LC   G  Q+A +    M+  GI+P++ ++
Sbjct: 645 EKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSF 691



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 190/374 (50%), Gaps = 3/374 (0%)

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           +V P++  +N  ++   K  +++  E +   M+   +  +V T+  LI    +      A
Sbjct: 159 AVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPA 218

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           + + ++M   GL P+   + + +     E DVEGAL +   M++        + ++L  G
Sbjct: 219 ILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNG 278

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+ G +++A +   +  EE    D  ++N L+N LC++ ++    +++  M+ +G   D
Sbjct: 279 LCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           + TY +LI G CK G I+ AV++  +M   + +PN V YN++I  LCK+  ++AA  L +
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G+L D  T+N+LI G  +      A  +F EM+  G   ++  Y+ILI  LC   
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSER 456

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             ++A  L+K M L G   + V Y TL+    KN    +  ++ D M + GVS  + TYN
Sbjct: 457 RLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516

Query: 643 AIISPLLGEKSAED 656
            +I+ L   K  E+
Sbjct: 517 TLINGLCKSKRVEE 530



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 196/440 (44%), Gaps = 34/440 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ALV    + G  +   +++  +  KG  + ++ +N+ +S L KL EI    ++   M
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS     N  T+N +I  LCKE  +E A  L   +   G+ P+V  FN +I   C   + 
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR 423

Query: 268 EFALKLFRKMGVMSGD------SVL--------------------------PNSVTHNCI 295
           E A++LF +M     D      S+L                           N V +N +
Sbjct: 424 EIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTL 483

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK  RV  AE+I   M   G+  +  TY TLI+G  +    EEA +L D+M+  GL
Sbjct: 484 IDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGL 543

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+   Y + + +   +GD++ A  ++ +M      PD  TY  L  GLC+ G V  A K
Sbjct: 544 KPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASK 603

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L   V  + MV    +YN +I  LCK      A +L   M+ +G  PD+ITY  +  G C
Sbjct: 604 LLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663

Query: 476 KGGN-IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
            GG  I+ AV     M +    P    +  +  GLC  +  D    L+      G     
Sbjct: 664 NGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQ- 722

Query: 535 TYNTLINGYFINGKIAEAFA 554
           +  ++I G+    K  +A A
Sbjct: 723 SETSIIRGFLKIQKFNDALA 742



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 44/385 (11%)

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY------NST 365
           ++A  +     +   +  L+   AR GS +  L L  +M    +  +   +       +T
Sbjct: 80  QWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYAT 139

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
            H L AE +    LF+L +  D  + PD   Y++    L +   +K    LH++++ + +
Sbjct: 140 SHHLHAEIN---PLFLLMER-DFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAV 195

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  ++NILI  LCK++ L  A  +L  M   GL PD  T+ TL+ G+ +  ++EGA++
Sbjct: 196 PPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALR 255

Query: 486 VYENM----------------------KKVEKK-----------PNLVIYNSIINGLCKD 512
           + E M                       ++E+            P+ V +N+++NGLC+ 
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRT 315

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +     ++      G  LD  TYN+LI+G    G+I EA  +   M +     N V Y
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N LI  LCK    + A EL +V+   G++PD  T+ +L+       + E  +EL ++M  
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435

Query: 632 SGVSPDNQTYNAIISPLLGEKSAED 656
            G  PD  TY+ +I  L  E+  ++
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKE 460



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+    + G  + A  +++ +++KG  ++  A+N  +  L K        
Sbjct: 578 CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAM 637

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCK-ECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           +L++EM+  G   +V T+ +V   LC     ++EA+     ML+ GI P    F  +   
Sbjct: 638 RLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEG 697

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            C +  +E  L     M +  G      S +   II GF K+ +
Sbjct: 698 LCSLS-MEDTLIQLINMVMEKGRF----SQSETSIIRGFLKIQK 736


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 169/679 (24%), Positives = 308/679 (45%), Gaps = 68/679 (10%)

Query: 43  LRQRKWKILEQMAPSLTNSLVNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           L++R   +LE+       +L     S   R  P LA+  +       +    L  +    
Sbjct: 68  LQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTY 127

Query: 102 HLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
            +L++      R + AL   G L+       +     LL+ +   K T    D L+    
Sbjct: 128 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTP 187

Query: 158 QIG------------------ATEGAYDVIQKLKVKGHSV---SIHAWNNFLSHLVKLNE 196
           ++G                     G  D + ++  +G +V   ++ A+N  +    K  +
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           + +   L+KEMV  G   ++ T+N V++ALCK   +++A +   +M+   + PN   +N 
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 307

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I      G  + A+++F++M      S+LP+ VT + ++   CK G+++ A ++   M 
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEM---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 364

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G + +V +Y  +++GYA  G   +   L D M+  G+ P+   +N  I      G ++
Sbjct: 365 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 424

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A+ + ++M D  + PD  TY  +   LCR G +  A +  NQ++++ +  D Y+YN LI
Sbjct: 425 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 484

Query: 437 NYLCKSNNLAAAKQLLSSMIVRG-----------------------------------LI 461
              C   +L  AK+L+S ++  G                                   L 
Sbjct: 485 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 544

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD + Y  L+DGYC  G +E A++V++ M     +PN+V+Y +++NG CK   +D   SL
Sbjct: 545 PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSL 604

Query: 522 LQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +   + G+  + I Y+ +I+G F  G+   A   F EM   GIA++   YNI++  L K
Sbjct: 605 FREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFK 664

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
             C+ +A  L K +    +  + +T  T++    +    EE  +L   +  S + P+  T
Sbjct: 665 NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVT 724

Query: 641 YNAIISPLLGE---KSAED 656
           Y+ +I+ L+ E   + AED
Sbjct: 725 YSIMITNLIKEGLVEEAED 743



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 243/534 (45%), Gaps = 52/534 (9%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-------LYKEMVSCGYVEN 215
           E A+D++ +L+ +G  V     N FL+ L +                L+    S      
Sbjct: 59  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 118

Query: 216 VNTFNLVIYALCKEC-----KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           V +     YA+  +C     + E AL+ + ++L++G+  N++  N ++   C+    + A
Sbjct: 119 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 178

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYA 328
           L +        G   +P+  +++ ++   C  G+   A+++   M + G  C  NV  Y 
Sbjct: 179 LDILLHRTPELG--CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 236

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDG+ + G   +A  L  EMV+RG+ P+ V YNS +H L     ++ A   L  M++K
Sbjct: 237 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296

Query: 389 HICPDHFTY-----------------------------------SILTKGLCRNGCVKQA 413
            + P+++TY                                   S+L   LC+ G +K+A
Sbjct: 297 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             + + +  +    D +SYNI++N       L     L   M+  G+ PD  T+  LI  
Sbjct: 357 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 416

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y   G ++ A+ ++  M+    KP++V Y ++I  LC+   +D A          G+  D
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 476

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              YN LI G+  +G + +A  + SE+ N G+ ++ V ++ +IN LCK G    A+ +  
Sbjct: 477 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 536

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +  G+ PD V Y+ L+  +      E+ + + D MV +G+ P+   Y  +++
Sbjct: 537 LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 590



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 220/467 (47%), Gaps = 4/467 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A DV   + +KG +  + ++N  L+       +     L+  M+  G   +  TF
Sbjct: 351 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 410

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I A      L++A+ ++  M   G+ P+VV +  +I   C++G ++ A++ F +M  
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM-- 468

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                V P+   +NC+I GFC  G +  A+E+   ++  G+  ++  ++++I+   + G 
Sbjct: 469 -IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 527

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A  + D  V  GL P+ VVY+  +      G +E AL V   M+   I P+   Y  
Sbjct: 528 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+ G + +   L  ++L+  +      Y+I+I+ L ++     AK     M   G
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG 647

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  DI TY  ++ G  K    + A+ +++ ++ +  K N++  N++I+G+ +   ++ AK
Sbjct: 648 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 707

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L  +  R  L+ + +TY+ +I      G + EA  MFS M+N G   N    N ++  L
Sbjct: 708 DLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 767

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            K     +A   +  +       +++T   LV  FS   +  E I  
Sbjct: 768 LKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 814



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 208/405 (51%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++A    G  + A  +  +++  G    +  +   ++ L ++ ++    + + +M
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +   +N +I   C    L +A  L   ++ +G+  ++V F+ IIN  C++G +
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G  + P++V ++ +++G+C +G++E A  +  AM+ AGI+ NV  Y
Sbjct: 529 MDAQNIF-DLTVNVG--LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 585

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM++RG+ P+ ++Y+  I  LF  G    A     +M +
Sbjct: 586 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTE 645

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  D  TY+I+ +GL +N C  +A  L  ++   ++  +  + N +I+ + ++  +  
Sbjct: 646 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 705

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +S+    L+P+++TY  +I    K G +E A  ++ +M+    +PN  + N ++ 
Sbjct: 706 AKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 765

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            L K   +  A + L +  +R   L+ +T   L++ +   G   E
Sbjct: 766 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 810



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 135/295 (45%), Gaps = 15/295 (5%)

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           +G +M A ++  L    GL            V+  L+     +G  E A  V   +   G
Sbjct: 525 LGRVMDAQNIFDLTVNVGL-------HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
              ++  +   ++   K+  I     L++EM+  G   +   ++++I  L +  +   A 
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
             ++ M +SGI  ++  +N+++    +    + A+ LF+++  M+   V  N +T N +I
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN---VKINIITLNTMI 694

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +G  +  RVE A+++  ++ ++ +  NV TY+ +I    + G  EEA  +   M   G  
Sbjct: 695 DGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 754

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL-----TKGLCR 406
           PN+ + N  +  L  + ++  A   LS + +++   +H T  +L     +KG CR
Sbjct: 755 PNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCR 809


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 243/481 (50%), Gaps = 7/481 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     ++  L+ A ++      A  +++++ + G    +  +N+ +  L K   I    
Sbjct: 231 CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAA 290

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL+  M+   +  +      +++ LC+  K++EA ++  ++      PN V +N +IN  
Sbjct: 291 KLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGY 346

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G  E A  L  K  V++G    P++ T N +I+G CK G +  A E    M+K G +
Sbjct: 347 VVSGRFEEAKDLLYKNMVIAGFE--PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE 404

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY  LIDG+ + G  EEA ++ + M  +GL  N V YN  I  L  +G ++ AL +
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  K   PD +T++ L  GLC+N  +++A  L+  +L E ++ +  +YN LI+   +
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A +L+  M  RG   D ITY  LI   CK G  E  + + E M   E  P++  
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINS 584

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
            N +IN  C+   ++ A   L+   + GL  D +TYN+LING    G+  EA  +F+ ++
Sbjct: 585 CNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQ 644

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  + V YN LI+  C  G +  A +L+   + +G IP+ +T++ L+  F KN S  
Sbjct: 645 AKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDS 704

Query: 621 E 621
           E
Sbjct: 705 E 705



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 256/517 (49%), Gaps = 11/517 (2%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +P V  F  +++A   +   + A  +++ +   G   +   +   +  L + N +    K
Sbjct: 197 SPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMK 256

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L +EM   G   +V TFN VI+ LCK  ++ EA  L+ RML      + +    +++  C
Sbjct: 257 LLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLC 316

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA-MIKAGID 321
           ++G ++ A  +  K+         PN+V +N +ING+   GR E A+++ Y  M+ AG +
Sbjct: 317 RMGKVDEARAMLSKIPN-------PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE 369

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T+  +IDG  + G    AL   DEMVK+G  PN + Y   I     +G  E A  V
Sbjct: 370 PDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           ++ M  K +  +   Y+ L   LC++G ++ A +++ ++  +    D Y++N LI  LCK
Sbjct: 430 VNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           ++ +  A  L   M++ G+I + +TY TLI  + +   I+ A ++   M+      + + 
Sbjct: 490 NDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNIT 549

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +I  LCK  + +    L++      +  +I + N LIN +   GK+ +A     +M 
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  + V YN LIN LCK G +Q+A  L   +   GI PD VTY TL++R+       
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFN 669

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           +  +L    V +G  P+  T++ +I+  +   S  +Q
Sbjct: 670 DACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQ 706



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 234/486 (48%), Gaps = 13/486 (2%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A +V   +  +G S +++ +   +     +NE+     L ++M   G V N   + ++I+
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV--MSG 282
           AL +  ++ EA+ L   M   G  P+V  FN +I+  C+ G +  A KL  +M +   + 
Sbjct: 244 ALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTA 303

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           D+++   + H     G C++G+V+ A     AM+    + N   Y TLI+GY   G  EE
Sbjct: 304 DALIQGYLMH-----GLCRMGKVDEAR----AMLSKIPNPNTVLYNTLINGYVVSGRFEE 354

Query: 343 ALRLC-DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           A  L    MV  G  P+   +N  I  L  +G +  AL  L +M+ K   P+  TY+IL 
Sbjct: 355 AKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILI 414

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G C+ G  ++A K+ N +  + +  +   YN LI  LCK   +  A Q+   M  +G  
Sbjct: 415 DGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCK 474

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PDI T+ +LI G CK   +E A+ +Y +M       N V YN++I+   +   +  A  L
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKL 534

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +   +  G  LD ITYN LI      G   +   +  +M    I  +    NILIN  C+
Sbjct: 535 VGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCR 594

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G    A + ++ MI  G+ PD VTY +L+    K    +E + L + +   G+ PD  T
Sbjct: 595 TGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVT 654

Query: 641 YNAIIS 646
           YN +IS
Sbjct: 655 YNTLIS 660



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 250/554 (45%), Gaps = 73/554 (13%)

Query: 165 AYDVIQKLKV-KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV---------- 213
           + D+ +K  + +G+  S H +   +  L  + E     KL K+M   G V          
Sbjct: 77  SMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIM 136

Query: 214 --------------------------ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
                                         ++N+V+  L      + A +++Y ML  GI
Sbjct: 137 RYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGI 196

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P V  F +++   C V +++ A  L R    M+    +PNS+ +  +I+   +  RV  
Sbjct: 197 SPTVYTFGVVMKAFCMVNEVDSACSLLRD---MTKHGCVPNSIIYQMLIHALSENNRVNE 253

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM----------- 356
           A ++   M   G + +V+T+  +I G  + G   EA +L D M+ R              
Sbjct: 254 AMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMH 313

Query: 357 --------------------PNNVVYNSTIHWLFAEGDVEGALFVL-SDMIDKHICPDHF 395
                               PN V+YN+ I+     G  E A  +L  +M+     PD F
Sbjct: 314 GLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAF 373

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           T++I+  GLC+ G +  A +  ++++++    +  +Y ILI+  CK  +   A ++++SM
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
             +GL  + + Y  LI   CK G I+ A+Q+Y  M     KP++  +NS+I GLCK+  +
Sbjct: 434 SAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKM 493

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           + A  L +     G++ + +TYNTLI+ +     I +A  +  EMR  G  ++ + YN L
Sbjct: 494 EEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGL 553

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I  LCK G  ++   L++ M    I P   +   L+  F +     + ++   DM+  G+
Sbjct: 554 IKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGL 613

Query: 635 SPDNQTYNAIISPL 648
           +PD  TYN++I+ L
Sbjct: 614 TPDIVTYNSLINGL 627



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 172/344 (50%), Gaps = 6/344 (1%)

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  + Y M+  GI   V T+  ++  +      + A  L  +M K G +PN+++Y   IH
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L     V  A+ +L +M      PD  T++ +  GLC+ G + +A KLH+++L      
Sbjct: 244 ALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTA 303

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV- 486
           DA     L++ LC+   +  A+ +LS +      P+ + Y TLI+GY   G  E A  + 
Sbjct: 304 DALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLL 359

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           Y+NM     +P+   +N +I+GLCK   L +A   L    + G   + ITY  LI+G+  
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G   EA  + + M   G+++N VGYN LI  LCK G  Q A ++   M   G  PD  T
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +L+    KN   EE + L+ DM+L GV  +  TYN +I   L
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFL 523



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 34/323 (10%)

Query: 126 VSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           VS LEFL+ ++   +  +     +  L+    + G  E A  V+  +  KG S++   +N
Sbjct: 389 VSALEFLDEMVK--KGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             +  L K  +I    ++Y EM S G   ++ TFN +IY LCK  K+EEAL LY  ML  
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE 506

Query: 246 GIWPNVVCFNMIIN-----EACQ-----VGDLEFA------------LKLFRKMGV---- 279
           G+  N V +N +I+     E  Q     VG++ F             +K   K G     
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566

Query: 280 ------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
                 M G+ + P+  + N +IN FC+ G+V  A +    MI+ G+  ++ TY +LI+G
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             + G  +EAL L + +  +G+ P+ V YN+ I     EG    A  +L   +     P+
Sbjct: 627 LCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPN 686

Query: 394 HFTYSILTKGLCRNGCVKQAFKL 416
             T+SIL     +N    + F +
Sbjct: 687 EITWSILINYFVKNNSDSEQFTI 709


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 236/464 (50%), Gaps = 4/464 (0%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   +++  N  ++    LN +G  + +  +++  G+  +  TF  +I  LC E K+ EA
Sbjct: 95  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 154

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L L+ +M+  G  PNVV +  +IN  C+VG+   A++L R    M   +  P+ V +  I
Sbjct: 155 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRS---MEQGNCQPDVVIYTSI 211

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+  CK  +V  A  +   M+  GI  ++ TY +L+         +    L ++MV   +
Sbjct: 212 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 271

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+ V++++ +  L  EG V  A  ++  MI + + PD  TY+ L  G C    + +A K
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 331

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           + + ++ +    D  SY  LIN  CK + +  A  L   M  +  IPD  TY TL+ G C
Sbjct: 332 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
             G ++ A+ ++  M    + P+LV Y+ +++ LCK+  L+ A +LL+A +   L  D  
Sbjct: 392 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN +I+G    G++  A  +FS + + G+  +   YNI+I+ LCK G   +A +L   M
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
             +   PD  TY T+   F +N      I+L ++M+  G S D+
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 229/465 (49%), Gaps = 4/465 (0%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           NNF S  +  N +      +  ++      ++  F  ++ ++ K       LSL  +M  
Sbjct: 34  NNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS 93

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G+ PNV   N++IN  C +  + FA  +  K+  +      P+  T   +I G C  G+
Sbjct: 94  FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQ---PDPTTFTTLIRGLCVEGK 150

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A  +   MI  G   NV TY TLI+G  + G++  A+RL   M +    P+ V+Y S
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I  L  +  V  A  + S M+ + I PD FTY+ L   LC     K    L NQ++   
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           ++ D   ++ +++ LCK   +  A +++  MI RG+ PD++TY TL+DG+C    ++ AV
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 330

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
           +V++ M +    P+++ Y ++ING CK   +D A  L +   R   + D  TYNTL+ G 
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGL 390

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G++ +A A+F EM   G   + V Y+IL++ LCK    ++A  L+K +    + PD 
Sbjct: 391 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDI 450

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             Y  ++    +    E   +L  ++   G+ P   TYN +I  L
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 495



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 229/471 (48%), Gaps = 4/471 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +   L+ + K+        L  +M S G   NV T N++I + C   ++  A S+ 
Sbjct: 64  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 123

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            ++LK G  P+   F  +I   C  G +  AL LF KM     +   PN VT+  +ING 
Sbjct: 124 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM---IDEGFQPNVVTYGTLINGL 180

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A  +  +M +     +V  Y ++ID   +     EA  L  +MV +G+ P+ 
Sbjct: 181 CKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDI 240

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             Y S +H L    + +    +L+ M++  I PD   +S +   LC+ G V +A ++ + 
Sbjct: 241 FTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDM 300

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +++  +  D  +Y  L++  C  + +  A ++   M+ +G  PD+I+Y TLI+GYCK   
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNT 538
           I+ A+ ++E M + E  P+   YN+++ GLC    L  A +L  +   R  + D +TY+ 
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 420

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++    N  + EA A+   +    +  +   YNI+I+ +C+ G  + AR+L   +   G
Sbjct: 421 LLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 480

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + P   TY  ++    K     E  +L  +M  +  SPD  TYN I    L
Sbjct: 481 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFL 531



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 214/426 (50%), Gaps = 4/426 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +  P  F  L+R     G    A  +  K+  +G   ++  +   ++ L K+       +
Sbjct: 132 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 191

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L + M       +V  +  +I +LCK+ ++ EA +L+ +M+  GI P++  +  +++  C
Sbjct: 192 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 251

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            + + +    L  +M       +LP+ V  + +++  CK G+V  A EI   MI+ G++ 
Sbjct: 252 NLCEWKHVTTLLNQM---VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY TL+DG+      +EA+++ D MV++G  P+ + Y + I+       ++ A+++ 
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  K   PD  TY+ L  GLC  G ++ A  L ++++    + D  +Y+IL++ LCK+
Sbjct: 369 EEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 428

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +L  A  LL ++    L PDI  Y  +IDG C+ G +E A  ++ N+      P++  Y
Sbjct: 429 RHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 488

Query: 503 NSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +I+GLCK   L+ A  L ++        D  TYNT+  G+  N +   A  +  EM  
Sbjct: 489 NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 548

Query: 562 VGIAVN 567
            G + +
Sbjct: 549 RGFSAD 554



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 188/426 (44%), Gaps = 39/426 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++ALS + R+L     P++V F  ++    ++      L L  +M       V PN  T
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFG---VPPNVYT 102

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC L RV FA                                     +  +++
Sbjct: 103 LNILINSFCHLNRVGFA-----------------------------------FSVLAKIL 127

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K G  P+   + + I  L  EG +  AL +   MID+   P+  TY  L  GLC+ G   
Sbjct: 128 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A +L   + + +   D   Y  +I+ LCK   +  A  L S M+ +G+ PDI TY +L+
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
              C     +    +   M   +  P++VI++++++ LCK+  +  A  ++    + G+ 
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D +TY TL++G+ +  ++ EA  +F  M   G A + + Y  LIN  CK     +A  L
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 367

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            + M     IPD  TY TL+         ++ I L  +MV  G  PD  TY+ ++  L  
Sbjct: 368 FEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK 427

Query: 651 EKSAED 656
            +  E+
Sbjct: 428 NRHLEE 433



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 184/383 (48%), Gaps = 40/383 (10%)

Query: 142 CKATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           C+    ++ +++ + C     TE A+++  ++  +G S  I  + + +  L  L E    
Sbjct: 201 CQPDVVIYTSIIDSLCKDRQVTE-AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHV 259

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             L  +MV+   + +V  F+ V+ ALCKE K+ EA  +   M++ G+ P+VV +  +++ 
Sbjct: 260 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 319

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C   +++ A+K+F    +M      P+ +++  +ING+CK+ +++ A  +   M +   
Sbjct: 320 HCLQSEMDEAVKVF---DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 376

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             + +TY TL+ G    G  ++A+ L  EMV RG M                        
Sbjct: 377 IPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM------------------------ 412

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
                      PD  TYSIL   LC+N  +++A  L   +   ++  D   YNI+I+ +C
Sbjct: 413 -----------PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 461

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           ++  L AA+ L S++  +GL P + TY  +I G CK G +  A +++  M   +  P+  
Sbjct: 462 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 521

Query: 501 IYNSIINGLCKDASLDAAKSLLQ 523
            YN+I  G  ++     A  LL+
Sbjct: 522 TYNTIARGFLQNNETLRAIQLLE 544


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 278/573 (48%), Gaps = 29/573 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSA----NSVSPLEFLEGLL------DSYEI-------- 141
           +++ L   +R D+A  ++   + A    + V+   F++GL       D++++        
Sbjct: 47  VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 106

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   + ALV    + G  + A  +++++  KG+S ++  +   +  L K   +    
Sbjct: 107 CLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 166

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG----IWPNVVCFNMI 257
           +++ +M+  G   +   +  +I  L K  KL+EAL    +M+++G    + P+VV  N++
Sbjct: 167 RIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLV 226

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I + C  G+LE AL  F ++     DS+     T N ++   CK  R E A      M +
Sbjct: 227 IRQLCASGNLEDALAYFDELD----DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSE 282

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
                 + TY +L+DG+ + G  +EAL    E V+RG +P+ V Y S I  L   G VE 
Sbjct: 283 RRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEE 342

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
                 +M ++   PD  TY+ L  G  +   + +A +++ Q+L+   V    +YNI+++
Sbjct: 343 GCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD 402

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LCK+  +A A     +M  RG +  ++TY  L+DG+C  GN+  AV+++  M     +P
Sbjct: 403 GLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 462

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFIN-GKIAEAFAM 555
           NLV YN II GLC+   L  A    +   QR    D  T+N+ ++G       + +   +
Sbjct: 463 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVEL 522

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F  M + G + N   Y+IL++ +C+ G  +   E+   M+  G+ PD V + TL+     
Sbjct: 523 FESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCI 582

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               +E +E+  ++     +PD  +Y +++  L
Sbjct: 583 AGRVDEALEVFRELERRS-APDAWSYWSLLDAL 614



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 238/475 (50%), Gaps = 12/475 (2%)

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           V        L+ L K  ++ R   L  EM  C    ++  F +VI  LC+E +L+EA S+
Sbjct: 7   VDTRVCTALLNGLCKTGQLDRAMLLLDEM-PCS--PDMVAFTVVINGLCREKRLDEAFSV 63

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             R +++G  P+ V +N+ I+  C+   ++ A +L +K   M     LP +VT+  +++G
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKK---MDEKKCLPTTVTYTALVDG 120

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
             K GR++ A  I   M++ G    ++TY  +IDG ++ G  EEA R+  +M+  G  P+
Sbjct: 121 LLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPD 180

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMID----KHICPDHFTYSILTKGLCRNGCVKQAF 414
             VY + I  L   G ++ AL  L+ M++    + + PD   ++++ + LC +G ++ A 
Sbjct: 181 AFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDAL 240

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
              ++ L++ +    +++N L+  LCK+     A   +  M  R   P + TY +L+DG+
Sbjct: 241 AYFDE-LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGF 299

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
            K G ++ A+   +   +    P+ V Y SII+GLCK   ++         +  G   DA
Sbjct: 300 LKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 359

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TY  LI+G+     I +A  ++ +M   G  V+ V YNI+++ LCK G   +A      
Sbjct: 360 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 419

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           M   G +   VTY+ L+  F    +    +EL   M+  G  P+  +YN II  L
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL 474



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 242/518 (46%), Gaps = 11/518 (2%)

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           LLD    C      F  ++    +    + A+ V+++    G       +N F+  L K 
Sbjct: 31  LLDEMP-CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKA 89

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             +   ++L K+M     +    T+  ++  L K  +L+EA+++  +M++ G  P +  +
Sbjct: 90  ERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTY 149

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            ++I+   + G +E A ++F     M G+   P++  +  +I+G  K+G+++ A      
Sbjct: 150 TVVIDGLSKAGRVEEARRIFVD---MLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQ 206

Query: 315 MIK----AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           M++     G++ +V  +  +I      G+ E+AL   DE+    L   +  +N  +  L 
Sbjct: 207 MVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALC 265

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
                E A+  +  M ++   P  FTY+ L  G  + G + +A     + +E   + DA 
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y  +I+ LCK   +    +    M  RG  PD +TY  LIDG+ K   I  A +VY  M
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 385

Query: 491 KKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKI 549
            +     + V YN I++GLCK   + +A  + L   +R  +   +TY+ L++G+   G +
Sbjct: 386 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 445

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
           + A  +F  M + G   N V YNI+I  LC+ G   +A    + ++   + PD  T+ + 
Sbjct: 446 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF 505

Query: 610 VTRFSKNC-SPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +    +   +  + +EL + MV  G SP+  +Y+ ++ 
Sbjct: 506 LHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMD 543



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 199/397 (50%), Gaps = 41/397 (10%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           TFN ++ ALCK  + EEA++   +M +   +P +  +  +++   ++G L+ AL L  K 
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEAL-LQLKE 314

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            V  G   +P++VT+  II+G CKLGRVE   E  + M   G + +  TYA LIDG+ + 
Sbjct: 315 AVERG--FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA 372

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF--------------------------- 370
               +A R+  +M++ G + + V YN  +  L                            
Sbjct: 373 KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTY 432

Query: 371 --------AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
                   +EG+V  A+ +   M+D+   P+  +Y+I+ +GLCR G + +A+    ++L+
Sbjct: 433 SALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 492

Query: 423 EHMVGDAYSYNILINYLCKS-NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
             +  D Y++N  ++ LC+  + +    +L  SM+ +G  P++ +Y  L+DG C+ G +E
Sbjct: 493 RRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLE 552

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLIN 541
             ++++  M      P++V++N++I  LC    +D A  + +  +R    DA +Y +L++
Sbjct: 553 VTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLD 612

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
                 ++ EA  +   M+  G A     Y++ + FL
Sbjct: 613 ALSRCERMEEARLLSFHMKLQGCAPRH--YDLTVRFL 647



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 168/376 (44%), Gaps = 11/376 (2%)

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSS 340
           D  L ++     ++NG CK G+++     R  ++   + C  ++  +  +I+G  R    
Sbjct: 3   DRKLVDTRVCTALLNGLCKTGQLD-----RAMLLLDEMPCSPDMVAFTVVINGLCREKRL 57

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +EA  + +  V+ G  P+ V YN  I  L     V+ A  +L  M +K   P   TY+ L
Sbjct: 58  DEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 117

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GL + G + +A  +  Q++E+       +Y ++I+ L K+  +  A+++   M+  G 
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177

Query: 461 IPDIITYGTLIDGYCKGGNIEGAV----QVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            PD   Y  LI G  K G ++ A+    Q+ EN      +P++VI+N +I  LC   +L+
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237

Query: 517 AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            A +          L   T+N L+       +  EA A   +M           Y  L++
Sbjct: 238 DALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVD 297

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
              K G   +A   +K  +  G IPD VTYT+++    K    EE  E   +M   G  P
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 357

Query: 637 DNQTYNAIISPLLGEK 652
           D  TY A+I   +  K
Sbjct: 358 DAVTYAALIDGFMKAK 373


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 169/679 (24%), Positives = 307/679 (45%), Gaps = 68/679 (10%)

Query: 43  LRQRKWKILEQMAPSLTNSLVNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           L++R   +LE+       +L     S   R  P LA+  +       +    L  +    
Sbjct: 55  LQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTY 114

Query: 102 HLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
            +L++      R + AL   G L+       +     LL+ +   K T    D L+    
Sbjct: 115 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTP 174

Query: 158 QIG------------------ATEGAYDVIQKLKVKGHSV---SIHAWNNFLSHLVKLNE 196
           ++G                     G  D + ++  +G +V   ++ A+N  +    K  +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           + +   L+KEMV  G   ++ T+N V++ALCK   +++A +   +M+   + PN   +N 
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 294

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I      G  + A+++F++M      S+LP+ VT + ++   CK G+++ A ++   M 
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEM---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G + +V +Y  +++GYA  G   +   L D M+  G+ P+   +N  I      G ++
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 411

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A+ + ++M D  + PD  TY  +   LCR G +  A +  NQ++++ +  D Y+YN LI
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 471

Query: 437 NYLCKSNNLAAAKQLLSSMIVRG-----------------------------------LI 461
              C   +L  AK+L+S ++  G                                   L 
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 531

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD + Y  L+DGYC  G +E A++V++ M     +PN+V+Y +++NG CK   +D   SL
Sbjct: 532 PDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSL 591

Query: 522 LQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +   + G+  + I Y+ +I+G F  G+   A   F EM   GIA++   YNI++  L K
Sbjct: 592 FREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFK 651

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
             C+ +A  L K +    +  + +T  T++    +    EE  +L   +  S + P   T
Sbjct: 652 NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVT 711

Query: 641 YNAIISPLLGE---KSAED 656
           Y+ +I+ L+ E   + AED
Sbjct: 712 YSIMITNLIKEGLVEEAED 730



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 243/534 (45%), Gaps = 52/534 (9%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-------LYKEMVSCGYVEN 215
           E A+D++ +L+ +G  V     N FL+ L +                L+    S      
Sbjct: 46  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 105

Query: 216 VNTFNLVIYALCKEC-----KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           V +     YA+  +C     + E AL+ + ++L++G+  N++  N ++   C+    + A
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 165

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYA 328
           L +        G   +P+  +++ ++   C  G+   A+++   M + G  C  NV  Y 
Sbjct: 166 LDILLHRTPELG--CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 223

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDG+ + G   +A  L  EMV+RG+ P+ V YNS +H L     ++ A   L  M++K
Sbjct: 224 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283

Query: 389 HICPDHFTY-----------------------------------SILTKGLCRNGCVKQA 413
            + P+++TY                                   S+L   LC+ G +K+A
Sbjct: 284 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             + + +  +    D +SYNI++N       L     L   M+  G+ PD  T+  LI  
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 403

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y   G ++ A+ ++  M+    KP++V Y ++I  LC+   +D A          G+  D
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              YN LI G+  +G + +A  + SE+ N G+ ++ V ++ +IN LCK G    A+ +  
Sbjct: 464 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +  G+ PD V Y+ L+  +      E+ + + D MV +G+ P+   Y  +++
Sbjct: 524 LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 577



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 205/422 (48%), Gaps = 4/422 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A DV   + +KG +  + ++N  L+       +     L+  M+  G   +  TF
Sbjct: 338 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 397

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I A      L++A+ ++  M   G+ P+VV +  +I   C++G ++ A++ F +M  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM-- 455

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                V P+   +NC+I GFC  G +  A+E+   ++  G+  ++  ++++I+   + G 
Sbjct: 456 -IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A  + D  V  GL P+ VVY+  +      G +E AL V   M+   I P+   Y  
Sbjct: 515 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 574

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+ G + +   L  ++L+  +      Y+I+I+ L ++     AK     M   G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG 634

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  DI TY  ++ G  K    + A+ +++ ++ +  K N++  N++I+G+ +   ++ AK
Sbjct: 635 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 694

Query: 520 SLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L  +  R  L+ ++ TY+ +I      G + EA  MFS M+N G   N    N ++  L
Sbjct: 695 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 754

Query: 579 CK 580
            K
Sbjct: 755 LK 756



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 207/405 (51%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++A    G  + A  +  +++  G    +  +   ++ L ++ ++    + + +M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +   +N +I   C    L +A  L   ++ +G+  ++V F+ IIN  C++G +
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G  + P++V ++ +++G+C +G++E A  +  AM+ AGI+ NV  Y
Sbjct: 516 MDAQNIF-DLTVNVG--LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 572

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM++RG+ P+ ++Y+  I  LF  G    A     +M +
Sbjct: 573 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE 632

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  D  TY+I+ +GL +N C  +A  L  ++   ++  +  + N +I+ + ++  +  
Sbjct: 633 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 692

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +S+    L+P ++TY  +I    K G +E A  ++ +M+    +PN  + N ++ 
Sbjct: 693 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 752

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            L K   +  A + L +  +R   L+ +T   L++ +   G   E
Sbjct: 753 ELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 149/466 (31%), Positives = 231/466 (49%), Gaps = 4/466 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  L+ + K         L ++M S G   +V T  +VI +LC   +++ A S   ++L
Sbjct: 48  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P+   F  +I   C  G +  AL LF KM    G+   PN VT+  +ING CK  
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM---IGEGFQPNVVTYGTLINGLCKDR 164

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +V  A  I   MI  GI  N+ TY +LI G  +    +    L +EMV   +MP+    N
Sbjct: 165 QVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 224

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + +  L  EG V  A  V+  MI + + P+  TY+ L  G C    V  A K+ + ++ +
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
             V +  SYN LIN  CK  ++  A  L   M  + L P+ +TY TLI G C  G ++ A
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
           + ++  M    + P+LV Y ++ + LCK+  LD A +LL+A +      D   Y T+++G
Sbjct: 345 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 404

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G++ +A  +FS + + G+  N   YNI+I+ LCK G   +A +L   M  +G  P+
Sbjct: 405 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 464

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             TY  +   F +N      IEL ++M+  G S D  T   ++  L
Sbjct: 465 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGML 510



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 217/418 (51%), Gaps = 4/418 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L+EALS + RML     P+ V FN ++    +       L L R+M       + P+  T
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFG---IPPDVYT 82

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              +IN  C L RV+FA      ++K G   +  T+ TLI G    G   EAL L D+M+
Sbjct: 83  LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G  PN V Y + I+ L  +  V  A  + S+MI K I P+  TY+ L  GLC+    K
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
               L N++++  ++ D ++ N +++ LCK   +A A  ++  MI RG+ P+++TY  L+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           DG+C    ++ AV+V++ M   +   N++ YN++ING CK  S+D A  L +   R  L 
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + +TYNTLI+G    G++ +A ++F EM   G   + V Y  L ++LCK     +A  L
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +K +      PD   YTT++    +    E+  +L  ++   G+ P+  TYN +I  L
Sbjct: 383 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGL 440



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 234/479 (48%), Gaps = 9/479 (1%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLK 173
           L+ ++      S L  L   +DS+ I    P V+    ++ +   +   + A+  + K+ 
Sbjct: 51  LLTSIAKTKHHSTLLSLSRQMDSFGI---PPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
             GH      +   +  L    +IG    L+ +M+  G+  NV T+  +I  LCK+ ++ 
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA +++  M+  GI PN+V +N +I+  C++ + +    L   M  M    ++P+  T N
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL---MNEMVDSKIMPDVFTLN 224

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +++  CK G V  A ++   MI  G++ NV TY  L+DG+      + A+++ D MV +
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
             + N + YN+ I+       V+ A+++  +M  + + P+  TY+ L  GLC  G ++ A
Sbjct: 285 DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDA 344

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L ++++    + D  +Y  L +YLCK+ +L  A  LL ++      PDI  Y T++DG
Sbjct: 345 ISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDG 404

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
            C+ G +E A  ++ N+     +PN+  YN +I+GLCK   L  A  L     + G   +
Sbjct: 405 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 464

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
             TYN +  G+  N +      +  EM   G +V+     +L+  L   G  Q  ++++
Sbjct: 465 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 179/359 (49%), Gaps = 19/359 (5%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +   L+ + K+        L  +M S G   +V T N++I + C   +L  A S+  ++L
Sbjct: 584 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 643

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRK-------------------MGVMSGDS 284
           K G  P+VV +  ++N  C++     +  +F                     +  M    
Sbjct: 644 KLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 703

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++PN V  + +++  CK G +  A ++   MIK G++ +V TY  L+DG+      +EA+
Sbjct: 704 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 763

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++ D MV +G +PN   YN  I+       ++ A+ +L  M  + +  D  TY+ L  GL
Sbjct: 764 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 823

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C  G ++ A  L ++++    + D  +Y IL++YLCK+++LA A  LL ++    L  DI
Sbjct: 824 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 883

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           + Y   IDG C+ G +E A  ++ N+     +P++  YN +I+GLCK   LD A  L +
Sbjct: 884 LVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 942



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 247/578 (42%), Gaps = 99/578 (17%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C     TE A+++  ++  KG S +I  +N+ +  L KL E      L  EMV    + +
Sbjct: 161 CKDRQVTE-AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPD 219

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T N V+ ALCKE  + EA  +   M+  G+ PNVV +N +++  C   +++ A+K+F 
Sbjct: 220 VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFD 279

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            M  +  D V  N +++N +ING+CK+  V+ A  +   M +  +  N  TY TLI G  
Sbjct: 280 TM--VHKDCV-ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 336

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G  ++A+ L  EMV RG +P+ V Y +   +L     ++ A+ +L  +   +  PD  
Sbjct: 337 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK------ 449
            Y+ +  G+CR G ++ A  L + +  + +  + ++YNI+I+ LCK   LA A       
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 450 -----------------------------QLLSSMIVRGLIPDIITYGTLI-----DGY- 474
                                        +LL  M+ RG   D+ T   L+     DG  
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLD 516

Query: 475 -------CKGGN---------------------------------IEGAVQVYENMKKVE 494
                  CK  +                                 ++ A+  +  M  + 
Sbjct: 517 QSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMH 576

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P+ V +  ++  + K        SL       G+  D  T N LIN +    ++  AF
Sbjct: 577 PPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAF 636

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
           ++ +++  +G   + V Y  L+N LCK             MI  GI PD  TY +L+   
Sbjct: 637 SVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHAL 683

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
              C  + V  L ++MV S + P+   ++ ++  L  E
Sbjct: 684 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 192/418 (45%), Gaps = 52/418 (12%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++ALS + RML     P+ V F  ++    ++      L L  +M       + P+  T
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFG---IPPDVYT 618

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC L R+ +A  +   ++K G   +V TY TL++G                  
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG------------------ 660

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
                                         L  MI K I PD FTY+ L   LC     K
Sbjct: 661 ------------------------------LCKMITKGISPDIFTYNSLIHALCNLCEWK 690

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
               L N+++   ++ +   ++ +++ LCK   +A A  ++  MI RG+ PD++TY  L+
Sbjct: 691 HVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALM 750

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           DG+C    ++ AV+V++ M      PN+  YN +ING C+   +D A  LL+     GL+
Sbjct: 751 DGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLI 810

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D +TYNTLI+G    G++  A A+F EM   G   + V Y IL+++LCK     +A  L
Sbjct: 811 ADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVL 870

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +K +    +  D + Y   +    +    E   +L  ++   G+ PD +TYN +I  L
Sbjct: 871 LKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 928



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 171/328 (52%), Gaps = 16/328 (4%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+ V+ KL   G    +  +   ++ L K             M++ G   ++ T+N +I+
Sbjct: 635 AFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIH 681

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           ALC  C+ +   +L   M+ S I PNVV F+ +++  C+ G +  A  +   + +M    
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV---VDMMIKRG 738

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V P+ VT+  +++G C    ++ A ++   M+  G   NVR+Y  LI+GY +    ++A+
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L ++M  +GL+ + V YN+ IH L   G ++ A+ +  +M+     PD  TY IL   L
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 858

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+N  + +A  L   +   ++  D   YNI I+ +C++  L AA+ L S++  +GL PD+
Sbjct: 859 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 918

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            TY  +I G CK G ++ A +++  M +
Sbjct: 919 RTYNIMIHGLCKRGLLDEANKLFRKMDE 946



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 3/320 (0%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTYSI 399
           +EAL   + M+ +   P+ V +N  +  + A+      L  LS  +D   I PD +T +I
Sbjct: 27  DEALSTFNRMLHKQPPPSTVDFNRLLTSI-AKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +   LC    V  AF    ++L+     DA ++  LI  LC    +  A  L   MI  G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P+++TYGTLI+G CK   +  A  ++  M      PN+V YNS+I+GLCK        
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           +L+       ++ D  T NT+++     G +AEA  +   M + G+  N V YN L++  
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C       A ++   M+    + + ++Y TL+  + K  S ++ + L ++M    ++P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 639 QTYNAIISPLLGEKSAEDQV 658
            TYN +I  L      +D +
Sbjct: 326 VTYNTLIHGLCHVGRLQDAI 345



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 142/296 (47%), Gaps = 38/296 (12%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE- 229
           K+  KG S  I  +N+ +  L  L E      L  EMV+   + NV  F+ V+ ALCKE 
Sbjct: 663 KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722

Query: 230 ----------------------------------CKLEEALSLYYRMLKSGIWPNVVCFN 255
                                              +++EA+ ++  M+  G  PNV  +N
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           ++IN  CQ+  ++ A+ L  +M +     ++ ++VT+N +I+G C +GR++ A  + + M
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSL---QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 839

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + +G   ++ TY  L+D   +     EA+ L   +    L  + +VYN  I  +   G++
Sbjct: 840 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 899

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           E A  + S++  K + PD  TY+I+  GLC+ G + +A KL  ++ E  +  ++ S
Sbjct: 900 EAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 1/210 (0%)

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           N L  A    + M+ +   P  + +  L+    K  +    + +   M      P++   
Sbjct: 24  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +IN LC    +D A S L    ++G   DA T+ TLI G  + GKI EA  +F +M  
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   N V Y  LIN LCK     +A  +   MI  GI P+ VTY +L+    K C  + 
Sbjct: 144 EGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKH 203

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           V  L ++MV S + PD  T N ++  L  E
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKE 233



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 17/152 (11%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
            ++H L +  R   A+ L   ++++  +  L     LLD   +CK        L  A   
Sbjct: 818 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY--LCKN-----HHLAEAMVL 870

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           + A EG+               I  +N  +  + +  E+     L+  + S G   +V T
Sbjct: 871 LKAIEGS----------NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           +N++I+ LCK   L+EA  L+ +M ++ IW N
Sbjct: 921 YNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 259/534 (48%), Gaps = 40/534 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+    + G    A ++++ +K +G +  I  +N  ++   K+ ++    KL  E+ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 NV T+  +I A CK   LE+AL +Y  M    + P+VV +  I+N  C+ G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +FR+M  +    V+PN  ++  +I+   K G V  A  ++  M+  GI  +V  Y 
Sbjct: 140 EAKSVFREMEEV---GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+DG  + G +  A  +   +++  L+PN V Y++ I      GDV     +L +M +K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI------------ 436
           HI P+   YS +  G  + G + +A  +  ++++ +++ + + Y  LI            
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 437 -----------------------NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                                  N L +S  +  A +L   M+ RGL+PD + Y +++DG
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           + K G    A  + + M +     ++V YN +INGL K    + ++S     +++GL  D
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPD 435

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + T+NT+IN Y   G +  A  + +EM++ G+  N +  NIL+  LC  G  ++  +L+ 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M++ G  P   T+  ++   SK+   + ++  HD +V  GV  D  TYN +IS
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIS 549



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 242/470 (51%), Gaps = 5/470 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +N  +    +  EI R  +L + M + G   ++ T+N ++   CK   L  A  L 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +    + PNV+ +  +I+  C+   LE AL ++ +M V    S++P+ VT+ CI+NG 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTV---KSLVPDVVTYTCIMNGL 132

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G+VE A+ +   M + G+  N  +YATLID   + G+  EA  L   MV RG+  + 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           VVY + +  LF  G    A  +   ++++ + P+  TYS L  G C+ G V +   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E+H+  +   Y+ +++   K   L  A  ++  M+ R ++P++  YGTLIDGY K   
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
              A+ +++ MK    + N  + +S +N L +   ++ A  L +     GLL D + Y +
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +++G+F  GK ++AF +  EM       + V YN+LIN L K G Y ++      M   G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + PD  T+ T++  + K  +    ++L ++M   G+ P++ T N ++  L
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 219/412 (53%), Gaps = 6/412 (1%)

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I  +V  FN++I+  C+ G++  A++L   M     +   P+ VT+N ++NGFCK+G + 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKT---EGPAPDIVTYNTLMNGFCKIGDLF 69

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A+++   +    ++ NV TY TLID Y +    E+AL + DEM  + L+P+ V Y   +
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G VE A  V  +M +  + P+ F+Y+ L   L + G V +AF L  +++   + 
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D   Y  L++ L K+     A+ +   ++   L+P+ +TY  LIDG+CK G++     +
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFI 545
            + M++    PN+++Y+SI++G  K   L+ A  +++   QR  L +   Y TLI+GYF 
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
             +   A  +F EM++ G+  N    +  +N L + G  ++A EL K M+  G++PD V 
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL--LGEKSAE 655
           YT+++  F K     +   +  +M       D   YN +I+ L  LG+  +E
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESE 421



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/523 (26%), Positives = 244/523 (46%), Gaps = 10/523 (1%)

Query: 132 LEGLLDSYEICKATPAVFDALVRACT-----QIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           LE  L  Y+       V D +   C      + G  E A  V ++++  G   +  ++  
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +  L K   +   + L   MV  G   +V  +  ++  L K      A  ++  +L+  
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PN V ++ +I+  C++GD+     L ++M       + PN + ++ I++G+ K G + 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEM---EEKHIFPNVIVYSSIVDGYTKKGLLN 279

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A ++   M++  I  NV  Y TLIDGY +      AL L  EM  RGL  NN V +S +
Sbjct: 280 EAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFV 339

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G +E A  +  DM+ + + PD   Y+ +  G  + G    AF +  ++ E+   
Sbjct: 340 NNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSG 399

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +YN+LIN L K     + +   + M   GL PD  T+ T+I+ YCK GN+  A+++
Sbjct: 400 FDVVAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKL 458

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
              MK    KPN +  N ++  LC    ++    LL     +G      T+  +++    
Sbjct: 459 LNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSK 518

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           + +         ++  +G+ ++   YN LI+  C+ G  ++A  + K M+  GI+ D +T
Sbjct: 519 SRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIIT 578

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           Y  L+  +  +   ++   +H  M+  GVSP+ +TYN ++  L
Sbjct: 579 YNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 227/464 (48%), Gaps = 5/464 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ ++V   T+ G    A DV++K+  +    ++  +   +    K ++ G    L+KEM
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G  EN    +  +  L +  ++EEA  L+  M+  G+ P+ V +  +++   + G  
Sbjct: 324 KSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKE 383

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  + ++M   S      + V +N +ING  KLG+ E +E     M + G+  +  T+
Sbjct: 384 SDAFNIAQEMTEKSSGF---DVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATF 439

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I+ Y + G+   AL+L +EM   GL PN++  N  +  L A G++E  + +L+DM+ 
Sbjct: 440 NTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLV 499

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P   T+  +     ++         H+Q++   +  D  +YN LI+  C+   +  
Sbjct: 500 MGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRR 559

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M+ +G++ DIITY  LI GYC   +++ A  V+  M      PN+  YN ++ 
Sbjct: 560 ATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLG 619

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL     +  A  L+   +  GL+ +A TY+ L++G+   G + E   ++ EM   G   
Sbjct: 620 GLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVP 679

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
               YN+LI+   K     QA+ELM+ M + GI P+  TY  L+
Sbjct: 680 KTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILI 723



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 202/429 (47%), Gaps = 17/429 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V D+ V    + G  E A ++ + +  +G       + + +    K  +    + + +EM
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  +V  +N++I  L K  K E   S +  M + G+ P+   FN +IN  C+ G+L
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKEGNL 452

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             ALKL  +M       + PNS+T N ++   C  G +E   ++   M+  G      T+
Sbjct: 453 GNALKLLNEM---KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTH 509

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++D  ++   ++  L   D++V  G+  +   YN+ I      G +  A  V  DM+ 
Sbjct: 510 KAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I  D  TY+ L  G C +  +K+AF +H+Q+L E +  +  +YNIL+  L  +  +  
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L++ M  RGL+P+  TY  L+ G+ K GN++  V++Y  M      P    YN +I+
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF-------INGKI-----AEAFA 554
              K   +  AK L+Q  Q  G+  ++ TY+ LI G++       +N  +     AEA  
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749

Query: 555 MFSEMRNVG 563
           +F EM   G
Sbjct: 750 LFEEMNEKG 758



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 68/121 (56%)

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           +N LI+GY  NG+I+ A  +   M+  G A + V YN L+N  CK G    A++LM  + 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L  + P+ +TYTTL+  + K+   E+ + ++D+M +  + PD  TY  I++ L      E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 656 D 656
           +
Sbjct: 140 E 140



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 110/223 (49%), Gaps = 15/223 (6%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + ++ L+    ++G    A  V + +  KG    I  +N  +      + + + + ++ +
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQ 601

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M++ G   NV T+N+++  L     ++EA  L  +M + G+ PN   ++++++   ++G+
Sbjct: 602 MLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++  +KL+ +M +  G   +P + T+N +I+ F K  ++  A+E+   M   GI  N  T
Sbjct: 662 MKECVKLYCEM-ITKG--FVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSST 718

Query: 327 YATLIDGY------------ARGGSSEEALRLCDEMVKRGLMP 357
           Y  LI G+             +     EA RL +EM ++G +P
Sbjct: 719 YDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 257/531 (48%), Gaps = 32/531 (6%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           + P   D L+  C+     + A D+   ++  G   S  + N  L  LV      +   +
Sbjct: 85  SKPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAV 144

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + +++  G   +   +   + A      L++   L   M+K G+ P+V  +N+++   C+
Sbjct: 145 FADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCK 204

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           V  ++ A KLF +   M   +++PN+VT+N +I+G+CK+G +E A   +  M +  ++CN
Sbjct: 205 VRRIKDARKLFDE---MIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECN 261

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP-------------------------- 357
           + TY +L++G    G  ++A  +  EM   G +P                          
Sbjct: 262 LVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEI 321

Query: 358 --NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             +   Y   ++ L   G +E A  VL+ +++  + P   +Y+IL    C+ G VK+A  
Sbjct: 322 RIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAIL 381

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
              Q+ E  +  +  ++N +I+  C++  +  A+  +  M+ +G+ P + TY +LI+GY 
Sbjct: 382 TTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYG 441

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAI 534
           + G+     +  + M K   KPN++ Y S+IN LCKD  L DA   L     R    +A 
Sbjct: 442 QKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAE 501

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YN LI       K+ +AF  F EM   GI    V YN LIN L + G  ++A +L   M
Sbjct: 502 IYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM 561

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              G  PD +TY +L++ ++K+ + ++ +EL+D M + G+ P   T++ +I
Sbjct: 562 AGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI 612



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 148/606 (24%), Positives = 290/606 (47%), Gaps = 45/606 (7%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           A + Y+ + ++  F  S  S   ++  LV+ R F+  L +  +++ + +           
Sbjct: 106 ATDLYSTMRKDG-FVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGT----------- 153

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
                 +     +   V+A   +   +  +++++ +   G   S+ A+N  L  L K+  
Sbjct: 154 ------RPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRR 207

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           I    KL+ EM+    V N  T+N +I   CK   +EEAL    RM +  +  N+V +N 
Sbjct: 208 IKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNS 267

Query: 257 IINEACQVGDLEFALKLFRKM-------------------------GVMSGDSVLPNSVT 291
           ++N  C  G ++ A ++  +M                         G+  G  +  +  T
Sbjct: 268 LLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERT 327

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  ++NG C++GR+E AEE+   +++ G+  +  +Y  L++ Y + G  ++A+   ++M 
Sbjct: 328 YCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME 387

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +RGL PN + +N+ I      G+V+ A   +  M++K + P   TY+ L  G  + G   
Sbjct: 388 ERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFV 447

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           + F+  +++ +  +  +  SY  LIN LCK   L  A+ +L+ MI RG+ P+   Y  LI
Sbjct: 448 RCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLI 507

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL-LQASQRIGL 530
           +  C    ++ A + ++ M +      LV YN++INGL ++  +  A+ L LQ + +   
Sbjct: 508 EASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCN 567

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITYN+LI+GY  +    +   ++ +M+ +GI      ++ LI + C+        ++
Sbjct: 568 PDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI-YACRKEGVVTMDKM 626

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            + M+   ++PD   Y  ++  ++++ +  + + LH  MV  GV  D  TYN++I   L 
Sbjct: 627 FQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLR 686

Query: 651 EKSAED 656
           ++   +
Sbjct: 687 DRRVSE 692



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 250/535 (46%), Gaps = 48/535 (8%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           L   RR  DA  L   ++  N V        L+D Y  CK               +G  E
Sbjct: 202 LCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGY--CK---------------VGGIE 244

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE--------- 214
            A    +++K +    ++  +N+ L+ L     +    ++  EM   G++          
Sbjct: 245 EALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFD 304

Query: 215 -------------------NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
                              +  T+ +++  LC+  ++E+A  +  +++++G+ P+ + +N
Sbjct: 305 DHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           +++N  CQ GD++ A+    +M       + PN +T N +I+ FC+ G V+ AE     M
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQM---EERGLEPNRITFNTVISKFCETGEVDHAETWVRRM 421

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G+   V TY +LI+GY + G         DEM K G+ PN + Y S I+ L  +  +
Sbjct: 422 VEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKL 481

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  VL+DMI + + P+   Y++L +  C    +K AF+  +++++  +     +YN L
Sbjct: 482 IDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTL 541

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           IN L ++  +  A+ L   M  +G  PD+ITY +LI GY K  N +  +++Y+ MK +  
Sbjct: 542 INGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGI 601

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
           KP +  ++ +I    K+  +   K   +  Q   + D   YN +I  Y  +G + +A ++
Sbjct: 602 KPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSL 661

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             +M + G+  +KV YN LI    +     + + L+  M   G++P   TY  L+
Sbjct: 662 HQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 163/335 (48%), Gaps = 29/335 (8%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +EA  L   M K G +P+    N  +  L      E  L V +D+ID    PD   Y   
Sbjct: 104 DEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKA 163

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
            +       + + F+L   ++++ M    ++YN+++  LCK   +  A++L   MI R +
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNM 223

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +P+ +TY TLIDGYCK G IE A+   E MK+   + NLV YNS++NGLC    +D A+ 
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283

Query: 521 LLQASQRIGLL-----------------------------DAITYNTLINGYFINGKIAE 551
           +L   +  G L                             D  TY  L+NG    G+I +
Sbjct: 284 VLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEK 343

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  + +++   G+  +K+ YNIL+N  C+ G  ++A    + M   G+ P+ +T+ T+++
Sbjct: 344 AEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVIS 403

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +F +    +        MV  GVSP  +TYN++I+
Sbjct: 404 KFCETGEVDHAETWVRRMVEKGVSPTVETYNSLIN 438



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 189/373 (50%), Gaps = 6/373 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ ++    + G  + A   ++++  KG S ++  +N+ ++   +     R ++   EM
Sbjct: 397 TFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEM 456

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV ++  +I  LCK+ KL +A  +   M+  G+ PN   +NM+I  +C +  L
Sbjct: 457 DKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKL 516

Query: 268 EFALKLFRKMGVMSG-DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           + A + F +M + SG D+ L   VT+N +ING  + GRV+ AE++   M   G + +V T
Sbjct: 517 KDAFRFFDEM-IQSGIDATL---VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVIT 572

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LI GYA+  ++++ L L D+M   G+ P    ++  I+    EG V     +  +M+
Sbjct: 573 YNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDK-MFQEML 631

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + PD F Y+ +      +G V +A  LH Q++++ +  D  +YN LI    +   ++
Sbjct: 632 QMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVS 691

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             K L+  M  +GL+P + TY  LI G C   +  GA   Y  M +     N+ +   +I
Sbjct: 692 EIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751

Query: 507 NGLCKDASLDAAK 519
           +GL ++  L  A+
Sbjct: 752 SGLREEGMLREAQ 764


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 264/550 (48%), Gaps = 6/550 (1%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDA-LLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           N F H++ES C + H+L   R + DA  +L   ++S   +   +  + L  +  +C    
Sbjct: 4   NGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGF 63

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            VFDAL     +    E A     K+K         + N  L    +L +     + +K+
Sbjct: 64  GVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKD 123

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G    V T+N++I  +CKE  +E A  L+  M   G+ P+ V +N +I+   +VG 
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+  +  F +M  MS +   P+ +T+N +IN FCK G++    E    M ++G+  NV +
Sbjct: 184 LDDTVYFFEEMKSMSCE---PDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+TL+D + +    ++AL+   +M + GL+PN   Y S +      G++  A  +  +M 
Sbjct: 241 YSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS 300

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +  +  TY+ L  GLC    +K+A +L  +++   ++ +  SY  LI+   K+ N+ 
Sbjct: 301 QVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMD 360

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +LL  M  RG+ PD++ YGT I   C    IE A  V   M++   K N  IY +++
Sbjct: 361 RALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLM 420

Query: 507 NGLCKDASLD-AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN-VGI 564
           +   K  +       L +  +    + A+T+  LI+G   N  +++A   F  + N  G+
Sbjct: 421 DAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL 480

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N   Y  +I+ LCK    + A  L + M   G++PD   YT+L+    K  +  + + 
Sbjct: 481 QANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALA 540

Query: 625 LHDDMVLSGV 634
           L D M   GV
Sbjct: 541 LRDKMAEIGV 550



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 156/316 (49%), Gaps = 1/316 (0%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           EEAL+   +M +  + P     N  +H     G  +G      DMI     P  FTY+I+
Sbjct: 80  EEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIM 139

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              +C+ G ++ A  L  ++    ++ D  +YN +I+   K   L         M     
Sbjct: 140 IDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSC 199

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD+ITY TLI+ +CK G +   ++ +  MK+   KPN+V Y+++++  CK+  +  A  
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALK 259

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                +R+GL+ +  TY +L++ Y   G +++AF +  EM  VG+  N V Y  LI+ LC
Sbjct: 260 FYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLC 319

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
                ++A EL   M+  G+IP+  +YT L+  F K  + +  +EL D+M   G+ PD  
Sbjct: 320 DVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLL 379

Query: 640 TYNAIISPLLGEKSAE 655
            Y   I  L G +  E
Sbjct: 380 LYGTFIWSLCGLEKIE 395



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 201/414 (48%), Gaps = 6/414 (1%)

Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +E   GL +  +     P    +++++    ++G  +      +++K       +  +N 
Sbjct: 149 IEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNT 208

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            ++   K  ++ +  + ++EM   G   NV +++ ++ A CKE  +++AL  Y  M + G
Sbjct: 209 LINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG 268

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + PN   +  +++  C++G+L  A   FR    MS   V  N VT+  +I+G C + R++
Sbjct: 269 LVPNEHTYTSLVDAYCKIGNLSDA---FRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            AEE+   M+ AG+  N+ +Y  LI G+ +  + + AL L DEM  RG+ P+ ++Y + I
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             L     +E A  V+++M +K I  + F Y+ L     ++    +   L  ++LE  + 
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             A ++ +LI+ LCK+  ++ A      +    GL  +   Y  +IDG CK   +E A  
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
           ++E M +    P+   Y S+I+G  K  ++  A +L      IG+     +  L
Sbjct: 506 LFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGARFGDL 559


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 156/596 (26%), Positives = 278/596 (46%), Gaps = 43/596 (7%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           LE M P L+  +V  ++     +P+L   F+ W     RF  + ES   I  LL+N    
Sbjct: 50  LEPMVPFLSPKIVTSIIQN-PPNPQLGFRFFIWASNFKRF-RAWESCDLITDLLIN---- 103

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
            + L L    + A     +             K     F  L++   ++G T+ A +   
Sbjct: 104 QNGLELYCQTLEALKNGGI-------------KVHNDAFFVLIKVYLKMGLTDKAMETFG 150

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
            ++    +  ++ +N  L  L++ N +     +Y  M+    + NV TF+++I  LCK  
Sbjct: 151 SMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSG 210

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
            +++AL L+  M + GI P+   + ++I+  C+   ++ A +LF K   M    V P+ V
Sbjct: 211 NVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDK---MKDSGVGPDFV 267

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N ++NGFC L RV+ A  +     K G   +VR Y+ LI G  R    E+   L  +M
Sbjct: 268 TCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKM 327

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           ++  + P+  +Y   +  L   G V  AL +L++M +  + PD   Y++L KG C  G +
Sbjct: 328 IEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLL 387

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  L  ++       +  +Y+ILI+ +C++     A+++ + M   G  P  +T+ +L
Sbjct: 388 SEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSL 447

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDG CK G +E A  ++  M ++ + P+L +                   L Q    +  
Sbjct: 448 IDGLCKTGQLEKAHLLFYKM-EIGRNPSLFL------------------RLSQGPSHV-- 486

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           LD+ +   ++     +G I +A+ +  ++ + G A     YNIL+N  CK G +  A +L
Sbjct: 487 LDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKL 546

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            + M   G+ PD VTY TL+    +    E+  ++ D M  +G +PD   Y  +++
Sbjct: 547 FREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMT 602



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 231/504 (45%), Gaps = 54/504 (10%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
            ++ LK  G  V   A+   +   +K+    +  + +  M       +V T+N+++  L 
Sbjct: 113 TLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLI 172

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++  L  AL++Y RM+K    PNV  F+++I+  C+ G+++ AL LF +M   +   +LP
Sbjct: 173 QKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEM---TQRGILP 229

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++ T+  +I+G C+  RV+ A  +   M  +G+  +  T   L++G+      +EA  L 
Sbjct: 230 DAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLL 289

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
               K G + +   Y+  I  LF     E    +   MI+ ++ PD + Y+I+ KGL   
Sbjct: 290 RLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEA 349

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V+ A +L N++ E  +V D   YN+LI   C    L+ A+ L   +      P++ TY
Sbjct: 350 GKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTY 409

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI G C+ G    A +++  M+K+   P+ V +NS+I+GLCK   L+ A  LL     
Sbjct: 410 SILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKA-HLLFYKME 468

Query: 528 IG---------------LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           IG               +LD+ +   ++     +G I +A+ +  ++ + G A     YN
Sbjct: 469 IGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYN 528

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           IL+N  CK G +  A                                    +L  +M   
Sbjct: 529 ILVNGFCKLGNFNGA-----------------------------------YKLFREMQFK 553

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
           G+SPD  TY  +I+ LL  +  ED
Sbjct: 554 GLSPDTVTYGTLINGLLRFQREED 577



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 194/411 (47%), Gaps = 18/411 (4%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + AY +  K+K  G        N  L+    L+ +   + L +     GYV +V  ++ +
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I  L +  + E+   LY +M++  + P+V  + +++    + G +  AL+L  +M   + 
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEM---TE 364

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             V+P++V +N +I GFC +G +  A  ++  + +     NV+TY+ LI G  R G + +
Sbjct: 365 SGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRD 424

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--------------LFVLSDMIDK 388
           A  + +EM K G  P+ V +NS I  L   G +E A              LF+       
Sbjct: 425 AQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPS 484

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           H+  D  +   + + LC +G + +A+++  Q+ +       Y+YNIL+N  CK  N   A
Sbjct: 485 HVL-DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGA 543

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L   M  +GL PD +TYGTLI+G  +    E A +V++ M+K    P+  +Y +++  
Sbjct: 544 YKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTW 603

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
           +C+   L  A SL     R            I GYF   ++ +A     EM
Sbjct: 604 MCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEM 654



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 100/445 (22%), Positives = 171/445 (38%), Gaps = 99/445 (22%)

Query: 97  SCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRAC 156
           SC ++  L   +R++D  LL   ++  N V P        D Y        ++  +++  
Sbjct: 305 SC-LIRGLFRAKRYEDVQLLYRKMIEDN-VKP--------DVY--------LYTIMMKGL 346

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            + G    A +++ ++   G       +N  +     +  +     L  E+       NV
Sbjct: 347 AEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNV 406

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T++++I  +C+     +A  ++  M K G +P+ V FN +I+  C+ G LE A  LF K
Sbjct: 407 KTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYK 466

Query: 277 MGVMSGDSVL---------------------------------------------PNSVT 291
           M +    S+                                              P   T
Sbjct: 467 MEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYT 526

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N ++NGFCKLG    A ++   M   G+  +  TY TLI+G  R    E+A ++ D+M 
Sbjct: 527 YNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQME 586

Query: 352 KRGLMPNNVVYNSTIHWL----------------------------------FAEGDVEG 377
           K G  P+  VY + + W+                                  F + +VE 
Sbjct: 587 KNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEK 646

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI-LI 436
           A+  L +M  K    D   Y+I   GLC+   V +A K+   +LEE+ V       + LI
Sbjct: 647 AVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIF-LILEEYKVVITPPCCVKLI 705

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLI 461
            +L K  +L  A  +    I +G +
Sbjct: 706 YFLLKEGDLDRAIDVFLYTIEKGYL 730



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 1/227 (0%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           S +++ + L   N L    Q L ++   G+      +  LI  Y K G  + A++ + +M
Sbjct: 93  SCDLITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSM 152

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKI 549
           +  +  P++  YN I++ L +   L  A ++     ++  L  + T++ LI+G   +G +
Sbjct: 153 RDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNV 212

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +A  +F EM   GI  +   Y ++I+ LC+      A  L   M   G+ PD+VT   L
Sbjct: 213 KDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNAL 272

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  F      +E   L       G   D + Y+ +I  L   K  ED
Sbjct: 273 LNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYED 319


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 244/478 (51%), Gaps = 13/478 (2%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           + ++N  L      ++      L +EM + G   N  T  +++ ALC    L++A+S + 
Sbjct: 29  VSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFN 88

Query: 241 -------RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
                  R+ ++   P+ V +  I++   + G+ +  L+ + KM         P  +T+ 
Sbjct: 89  SRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKM---VASKCEPTLLTYT 145

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +++G CK  +VE A ++   MI+ G   ++  Y++LIDG ++ G  +EA +L D M+ R
Sbjct: 146 VLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIAR 205

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G  P  V Y S +  L   G ++ A+  + +M  + + P   TYS +  G    G V++A
Sbjct: 206 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEA 265

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F +  ++ +     D  SY + I  L        A+++  +M+ +G  PD+ TYG +ID 
Sbjct: 266 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 325

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
           +CK G++  A  V   M K   KPN  IY  I++G  K + L+ A  L Q   + G+L +
Sbjct: 326 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 385

Query: 534 -ITYNTLINGYFINGKIAEAFAMFSEM--RNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            +TYNT+IN      K+ EA  +  EM  R   +  + V Y+++I+ L K G  ++A +L
Sbjct: 386 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDL 445

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  MI +G+IPD  TYT+L+   +        +EL ++M+ +G+ PD+ TY  ++  L
Sbjct: 446 LAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 503



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 205/406 (50%), Gaps = 7/406 (1%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y++MV+      + T+ +++  LCK  K+E A  ++  M++ G  P+++ ++ +I+   +
Sbjct: 129 YEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSK 188

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ A KL   + +M      P +V +  I+ G CK GR++ A +    M +  +   
Sbjct: 189 AGRVDEARKL---VDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPR 245

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY+ ++ GY   G  EEA  + +EM  R   P+ + Y   I  L++ G  E A  V  
Sbjct: 246 VDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFE 305

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M++K   PD  TY I+    C+ G +  A  +   + +  +  + Y Y ++++   KS+
Sbjct: 306 TMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSS 365

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVI 501
            L  A +L   ++  G++P  +TY T+I+  CK   ++ A+++   M  +K E +P++V 
Sbjct: 366 RLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVT 425

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+ II+GL K    + A  LL      G++ D  TY +LI      GK++ A  +  EM 
Sbjct: 426 YSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEML 485

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
             GI  +   Y  L+  LC+      A +L++ M+ +G  P+  T+
Sbjct: 486 KAGIFPDDHTYGTLVQILCRSDV-DAAWDLLQEMMRNGHTPNEFTF 530



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 219/477 (45%), Gaps = 18/477 (3%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N+ L  LV+  ++      ++  +S     NV++FN+++         E   +L   M  
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLF--------RKMGVMSGDSVLPNSVTHNCII 296
            GI  N     +I++  C   DL+ A+  F        R    +      P+SVT+  I+
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEA----PDSVTYTAIV 113

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +G  K G  +   E    M+ +  +  + TY  L+DG  +    E A  + +EM+++G  
Sbjct: 114 DGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHK 173

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ + Y+S I  L   G V+ A  ++  MI +   P    Y+ +  GLC+ G +++A K 
Sbjct: 174 PDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKT 233

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++    +     +Y+ ++        +  A  ++  M  R   PD I+Y   I+    
Sbjct: 234 IQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYS 293

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
            G  E A +V+E M +   KP++  Y  II+  CK+ S+ AA  +L+   +  +  +   
Sbjct: 294 IGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYI 353

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y  +++G+  + ++ EA  ++  +   GI  + V YN +IN LCK     +A EL++ M 
Sbjct: 354 YTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQ 413

Query: 596 LHG--IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
                + P  VTY+ ++    K    E   +L  +M+ +GV PD  TY ++I  L G
Sbjct: 414 RRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAG 470



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 200/442 (45%), Gaps = 8/442 (1%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F+   E +C +   +          ++ G   + N  + LE+ E ++ S   C+ T   +
Sbjct: 87  FNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASK--CEPTLLTY 144

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
             LV    +    E A DV +++  KGH   I A+++ +  L K   +    KL   M++
Sbjct: 145 TVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIA 204

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G       +  ++  LCK  +++EA+     M +  + P V  ++ I+     +G +E 
Sbjct: 205 RGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEE 264

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A   F  M  M+     P+++++   I     +GR E AE++   M++ G   ++ TY  
Sbjct: 265 A---FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI 321

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +ID + + GS   A  +   M K  + PN  +Y   +        +E AL +   ++   
Sbjct: 322 IIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG 381

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKL--HNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           I P   TY+ +   LC+   + +A +L    Q  +E +     +Y+++I+ L K      
Sbjct: 382 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEER 441

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  LL+ MI  G+IPD  TY +LI      G +  A+++ E M K    P+   Y +++ 
Sbjct: 442 AFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ 501

Query: 508 GLCKDASLDAAKSLLQASQRIG 529
            LC+ + +DAA  LLQ   R G
Sbjct: 502 ILCR-SDVDAAWDLLQEMMRNG 522



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 186/385 (48%), Gaps = 16/385 (4%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALL---LMGNLMSANSVSPLEFLEGLLDSYEICKATPA 147
           +H +E +C +   ++      D +    L+  L  A  V     L  L+    I +  P 
Sbjct: 154 AHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLM----IARGPPP 209

Query: 148 V---FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
               + ++V    + G  + A   IQ+++ +     +  ++  ++  + + ++   + + 
Sbjct: 210 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVM 269

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           +EM       +  ++ + I AL    + EEA  ++  M++ G  P++  + +II+  C+ 
Sbjct: 270 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 329

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G +  A  + R   +M   +V PN   +  I++GF K  R+E A E+   ++K GI  + 
Sbjct: 330 GSMAAATHVLR---LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPST 386

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            TY T+I+   +    +EAL L  EM +R   L P+ V Y+  IH L   G  E A  +L
Sbjct: 387 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 446

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++MID  + PD FTY+ L + L   G V +A +L  ++L+  +  D ++Y  L+  LC+S
Sbjct: 447 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 506

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITY 467
            ++ AA  LL  M+  G  P+  T+
Sbjct: 507 -DVDAAWDLLQEMMRNGHTPNEFTF 530



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +   + A   IG  E A  V + +  KG    +H +   + +  K   +    
Sbjct: 277 CAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAAT 336

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            + + M       N   + +++    K  +LEEAL LY R+LK GI P+ V +N +IN  
Sbjct: 337 HVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINAL 396

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C++  ++ AL+L R+M     + + P+ VT++ II+G  K+G  E A ++   MI  G+ 
Sbjct: 397 CKLKKMDEALELLREMQ-RRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI 455

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY +LI   A  G    A+ L +EM+K G+ P++  Y + +  L    DV+ A  +
Sbjct: 456 PDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL-CRSDVDAAWDL 514

Query: 382 LSDMIDKHICPDHFTYSILTK 402
           L +M+     P+ FT+  + K
Sbjct: 515 LQEMMRNGHTPNEFTFKAVEK 535


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 235/463 (50%), Gaps = 4/463 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           ++ F S + +  +        K++   G   N+ T N++I   C+ CK   A S+  +++
Sbjct: 91  FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P+   FN +IN  C  G +  A+ L  +M V +G    P+ VT+N I+NG C+ G
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM-VENG--CQPDMVTYNSIVNGICRSG 207

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
               A ++   M +  +  +V TY+T+ID   R G  + A+ L  EM  +G+  + V YN
Sbjct: 208 DTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S +  L   G       +L DM+ + I P+  T+++L     + G +++A +L+ +++  
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +  +YN L++  C  N L+ A  +L  M+     PDI+T+ +LI GYC    ++  
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           ++V+ N+ K     N V Y+ ++ G C+   +  A+ L Q     G+L D +TY  L++G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              NGK+ +A  +F +++   + +  V Y  +I  +CK G  + A  L   +   G+ P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            +TYT +++   K  S  E   L   M   G +P++ TYN +I
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 217/427 (50%), Gaps = 4/427 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K ++A++L+  M++S   P +V F+   +   +       L   +++ +   + +  N  
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLEL---NGIAHNIY 124

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +IN FC+  +  FA  +   ++K G + +  T+ TLI+G    G   +A+ L D M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM 184

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ G  P+ V YNS ++ +   GD   A  +L  M ++++  D FTYS +   LCR+GC+
Sbjct: 185 VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A  L  ++  + +     +YN L+  LCK+        LL  M+ R ++P++IT+  L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +D + K G ++ A ++Y+ M      PN++ YN++++G C    L  A ++L    R   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D +T+ +LI GY +  ++ +   +F  +   G+  N V Y+IL+   C+ G  + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L + M+ HG++PD +TY  L+     N   E+ +E+ +D+  S +      Y  II  + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 650 GEKSAED 656
                ED
Sbjct: 485 KGGKVED 491



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 239/515 (46%), Gaps = 66/515 (12%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D  ++L++ G + +I+  N  ++   +  +    + +  +++  GY  +  TFN +I  L
Sbjct: 109 DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGL 168

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
           C E K+ +A+ L  RM+++G  P++V +N I+N  C+ GD   A  + RKM         
Sbjct: 169 CLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADV 228

Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
                                    M    +  + VT+N ++ G CK G+      +   
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+   I  NV T+  L+D + + G  +EA  L  EM+ RG+ PN + YN+ +     +  
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  +L  M+     PD  T++ L KG C    V    K+   + +  +V +A +Y+I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+   C+S  +  A++L   M+  G++PD++TYG L+DG C  G +E A++++E+++K +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
               +V+Y +II G+CK                                   GK+ +A+ 
Sbjct: 469 MDLGIVMYTTIIEGMCK----------------------------------GGKVEDAWN 494

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F  +   G+  N + Y ++I+ LCK G   +A  L++ M   G  P+  TY TL+    
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++       +L ++M   G S D  +   +I  LL
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 217/433 (50%), Gaps = 4/433 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F+ L+      G    A  ++ ++   G    +  +N+ ++ + +  +    + + ++
Sbjct: 159 TTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRK 218

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V T++ +I +LC++  ++ A+SL+  M   GI  +VV +N ++   C+ G 
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
                 L +    M    ++PN +T N +++ F K G+++ A E+   MI  GI  N+ T
Sbjct: 279 WNDGALLLKD---MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY       EA  + D MV+    P+ V + S I        V+  + V  ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + +  +  TYSIL +G C++G +K A +L  +++   ++ D  +Y IL++ LC +  L 
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++   +    +   I+ Y T+I+G CKGG +E A  ++ ++     KPN++ Y  +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK  SL  A  LL+  +  G   +  TYNTLI  +  +G +  +  +  EM++ G +
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 566 VNKVGYNILINFL 578
            +     ++I+ L
Sbjct: 576 ADASSIKMVIDML 588



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 211/413 (51%), Gaps = 5/413 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++++V    + G T  A+D+++K++ +     +  ++  +  L +   I    
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   +V T+N ++  LCK  K  +   L   M+   I PNV+ FN++++  
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L+ A +L+++M +  G S  PN +T+N +++G+C   R+  A  +   M++    
Sbjct: 309 VKEGKLQEANELYKEM-ITRGIS--PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ T+ +LI GY      ++ +++   + KRGL+ N V Y+  +      G ++ A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + PD  TY IL  GLC NG +++A ++   + +  M      Y  +I  +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  L  S+  +G+ P+++TY  +I G CK G++  A  +   M++    PN   
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D  L A+  L++  +  G   DA +   +I+   ++G++ ++F
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID-MLLSGELDKSF 597



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 139/288 (48%), Gaps = 1/288 (0%)

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           NV +   +     +   + A+ +  +MI     P    +S     + R            
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           Q+    +  + Y+ NI+IN  C+      A  +L  ++  G  PD  T+ TLI+G C  G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEG 172

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYN 537
            +  AV + + M +   +P++V YNSI+NG+C+      A  +L+   +R    D  TY+
Sbjct: 173 KVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYS 232

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T+I+    +G I  A ++F EM   GI  + V YN L+  LCK G +     L+K M+  
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            I+P+ +T+  L+  F K    +E  EL+ +M+  G+SP+  TYN ++
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 252/485 (51%), Gaps = 8/485 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++++++       + ++N  +    +  E+ +  +L  EM   G   ++ T+ ++I 
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A CK  K++EA+     M   G+  ++V +  +I   C  G+L+    LF ++ +  GDS
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDS 279

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P ++T+N +I GFCKLG+++ A EI   MI+ G+  NV TY  LIDG    G ++EAL
Sbjct: 280 --PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +  + M+++   PN V YN  I+ L  +G V  A+ ++  M  +   PD+ TY+IL  GL
Sbjct: 338 QPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 405 CRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           C  G + +A KL   +L++  +   D  SYN LI+ LCK N L  A  +   ++ +    
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D +T   L++   K G++  A+++++ +   +   N   Y ++I+G CK   L+ AK LL
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 523 QASQRIGLLD--AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
               R+  L      YN L++     G + +A+ +F EM+      + V +NI+I+   K
Sbjct: 518 -CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G  + A  L+  M   G+ PD  TY+ L+ RF K    +E I   D MV SG  PD   
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636

Query: 641 YNAII 645
            ++++
Sbjct: 637 CDSVL 641



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 250/525 (47%), Gaps = 41/525 (7%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+   +K+      ++  + +  L   V++ + G  + +   M+  G+  NV   N++
Sbjct: 89  ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +  LC+  +  +A+SL   M ++ + P+V  +N +I   C+  +LE AL+L  +M    G
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM---KG 205

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
                + VT   +I+ FCK G+++ A      M   G++ ++  Y +LI G+   G  + 
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
              L DE+++RG  P  + YN+ I      G ++ A  +   MI++ + P+ +TY+ L  
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLC  G  K+A +  N ++E+    +A +YNI+IN LCK   +A A +++  M  R   P
Sbjct: 326 GLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIINGLCKDASLDAAKS 520
           D ITY  L+ G C  G+++ A ++   M K      P+++ YN++I+GLCK+  L  A  
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 521 LLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN------------ 567
           +     +++G  D +T N L+N     G + +A  ++ ++ +  I  N            
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505

Query: 568 KVG-----------------------YNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
           K G                       YN L++ LCK G   QA  L + M      PD V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++  ++    K    +    L   M  +G+SPD  TY+ +I+  L
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 158/628 (25%), Positives = 287/628 (45%), Gaps = 48/628 (7%)

Query: 16  LSRAFHVGKQFANP----------STEDIVFRAIC----------VNLRQRKWKILEQMA 55
           L R  HV ++  NP          S  +   R++C          V++ Q+       +A
Sbjct: 13  LRRDEHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLA 72

Query: 56  PSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR----FD 111
            + +N +   V S   ++ +LA  FY  + E + F + +  S  ++   V  R+    F 
Sbjct: 73  FAGSNLMAKLVRS---RNHELAFSFYRKMLETDTFINFVSLS-GLLECYVQMRKTGFAFG 128

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT------------PAVF--DALVRACT 157
              L++    + N  +    L+GL  + E  KA             P VF  + ++R   
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +    E A ++  ++K  G S S+  W   +    K  ++       KEM   G   ++ 
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +  +I   C   +L+   +L+  +L+ G  P  + +N +I   C++G L+ A ++F   
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE-- 306

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    V PN  T+  +I+G C +G+ + A +    MI+   + N  TY  +I+   + 
Sbjct: 307 -FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKD 365

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI--DKHICPDHF 395
           G   +A+ + + M KR   P+N+ YN  +  L A+GD++ A  +L  M+    +  PD  
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +Y+ L  GLC+   + QA  +++ ++E+   GD  + NIL+N   K+ ++  A +L   +
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
               ++ +  TY  +IDG+CK G +  A  +   M+  E +P++  YN +++ LCK+ SL
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545

Query: 516 DAAKSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           D A  L +  QR     D +++N +I+G    G I  A ++   M   G++ +   Y+ L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPD 602
           IN   K G   +A      M+  G  PD
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPD 633



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 226/464 (48%), Gaps = 6/464 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   +  L+ A  + G  + A   ++++K  G    +  + + +       E+ R  
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ E++  G      T+N +I   CK  +L+EA  ++  M++ G+ PNV  +  +I+  
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C VG  + AL+    + +M      PN+VT+N IIN  CK G V  A EI   M K    
Sbjct: 328 CGVGKTKEALQ---PLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGAL 379
            +  TY  L+ G    G  +EA +L   M+K      P+ + YN+ IH L  E  +  AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   +++K    D  T +IL     + G V +A +L  Q+ +  +V ++ +Y  +I+  
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+  L  AK LL  M V  L P +  Y  L+   CK G+++ A +++E M++    P++
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V +N +I+G  K   + +A+SLL    R GL  D  TY+ LIN +   G + EA + F +
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           M + G   +    + ++ +    G   +  EL+K ++   I+ D
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 247/525 (47%), Gaps = 19/525 (3%)

Query: 146 PAVFDALVRACTQIGAT------------EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
           P V+  LV A ++                + A  V Q+    G S++  A +N ++ LV+
Sbjct: 26  PRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAF-AGSNLMAKLVR 84

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
                  +  Y++M+      N  + + ++    +  K   A  +   MLK G   NV  
Sbjct: 85  SRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYN 144

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N+++   C+  +   A+ L R+M     +S++P+  ++N +I GFC+   +E A E+  
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREM---RRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M  +G   ++ T+  LID + + G  +EA+    EM   GL  + VVY S I      G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           +++    +  +++++   P   TY+ L +G C+ G +K+A ++   ++E  +  + Y+Y 
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+ LC       A Q L+ MI +   P+ +TY  +I+  CK G +  AV++ E MKK 
Sbjct: 322 GLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL---DAITYNTLINGYFINGKIA 550
             +P+ + YN ++ GLC    LD A  LL    +       D I+YN LI+G     ++ 
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A  ++  +     A ++V  NIL+N   K G   +A EL K +    I+ +  TYT ++
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             F K         L   M +S + P    YN ++S L  E S +
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF +   +L+     + Y++NIL+  LC++     A  LL  M    L+PD+ +Y T+I 
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G+C+G  +E A+++   MK      +LV +  +I+  CK   +D A   L+  + +GL  
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D + Y +LI G+   G++    A+F E+   G +   + YN LI   CK G  ++A E+ 
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + MI  G+ P+  TYT L+         +E ++  + M+     P+  TYN II+ L  +
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKD 365

Query: 652 KSAEDQV 658
               D V
Sbjct: 366 GLVADAV 372



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 159/330 (48%), Gaps = 5/330 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL-YKE 206
            ++ ++    + G    A ++++ +K +        +N  L  L    ++    KL Y  
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 207 MVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +    Y + +V ++N +I+ LCKE +L +AL +Y  +++     + V  N+++N   + G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D+  A++L++++   S   ++ NS T+  +I+GFCK G +  A+ +   M  + +  +V 
Sbjct: 474 DVNKAMELWKQI---SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  L+    + GS ++A RL +EM +    P+ V +N  I      GD++ A  +L  M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD FTYS L     + G + +A    +++++     DA+  + ++ Y       
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
               +L+  ++ + ++ D     T++D  C
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMC 680


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 240/496 (48%), Gaps = 8/496 (1%)

Query: 156 CTQIGAT---EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           C  +G +     A +++ K+ + G + ++  +  ++  L K+   G  W+L + +     
Sbjct: 217 CRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQ 276

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             N + FN VIY LC+   L+EA  ++  M  SGI P+V  ++++I+  C+ G ++ A +
Sbjct: 277 PLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASE 336

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +F++M       +LPN  +++ +I+GFCK GRV+ A E+   M  +GI  +V +Y+ LID
Sbjct: 337 VFKEM---RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILID 393

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ R G  + A++  +EM      P+   Y S I   +       AL     M    + P
Sbjct: 394 GFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWP 453

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D    + +    CR     +A  L  +  E  +  + YSYN  I+ +C+ +    A QLL
Sbjct: 454 DTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLL 513

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M+ R ++PD++ Y TLI  + K  N E AV ++  M KV    N+  Y  +IN    D
Sbjct: 514 PVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISD 573

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +D A  L +  +   +  D I Y +L+ G+   G++  A A+F EM   G + N V Y
Sbjct: 574 CKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTY 633

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
              IN   K     QA +L + M   G+ PD + YT L+  F           L D+M  
Sbjct: 634 TCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQ 693

Query: 632 SG-VSPDNQTYNAIIS 646
            G  +P+   Y  +I+
Sbjct: 694 EGRCTPNVVMYTCLIN 709



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 231/507 (45%), Gaps = 8/507 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VFD L++        E A  V  + K  G  ++I + N  L  LV+ N +     L++ +
Sbjct: 138 VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVL 197

Query: 208 VSCGYVENVNTFNLVIYALCK----ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  G   N++T+ +++   C+       +  A  +  ++  SG  PNVV +   I   C+
Sbjct: 198 IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCK 257

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           VG    A +L + +      +   N+   N +I G C+ G ++ A E+   M  +GI  +
Sbjct: 258 VGLFGVAWRLIQNL---CRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPD 314

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y+ LIDG+ R G  ++A  +  EM   G++PN   Y+  I     EG V+ AL V  
Sbjct: 315 VYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFE 374

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M +  I PD ++YSIL  G CR G +  A K   ++   +    A++Y  LI    KS 
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
             A A +    M   G+ PD I    ++  YC+  +   A+ + E  ++     N   YN
Sbjct: 435 QFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYN 494

Query: 504 SIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
             I+ +C+ +  + A  LL    +R  L D + Y+TLI+ +       +A  +F +M  V
Sbjct: 495 EFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKV 554

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           GI  N   Y ILIN          A  L K M    + PD + YT+LV  F         
Sbjct: 555 GITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRA 614

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
             L D+M   G SP+  TY   I+  L
Sbjct: 615 RALFDEMSREGCSPNVVTYTCFINEYL 641



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 249/512 (48%), Gaps = 25/512 (4%)

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK----EMVS 209
           + C QI   E + +    + +  ++++  +W  F    + + +I  F+K       E+VS
Sbjct: 73  KGCVQIHGFENSINSFSII-IHTYALAGMSWEVF----ILIRDIVTFYKEENRDAGELVS 127

Query: 210 CGY-VENVNT-FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN---EACQV 264
               VE  N  F+++I        LE A  ++ R    GI  N++  N ++    E  +V
Sbjct: 128 LLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRV 187

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK-LG---RVEFAEEIRYAMIKAGI 320
             +    ++  K G        PN  T+  ++N FC+ +G    +  A EI   +  +G 
Sbjct: 188 DGVRLLFEVLIKFGPR------PNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGE 241

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV TY T I G  + G    A RL   + ++    NN  +N+ I+ L   G ++ A  
Sbjct: 242 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASE 301

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V  +M +  I PD ++YSIL  G CR G V QA ++  ++    ++ + YSY+ILI+  C
Sbjct: 302 VFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFC 361

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A ++   M   G++PD+ +Y  LIDG+C+ G+++ A++ +E M      P+  
Sbjct: 362 KEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAF 421

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y S+I G  K      A    +  Q++G+  D I  N +++ Y       +A A+  + 
Sbjct: 422 NYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKF 481

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           +  G+  N   YN  I+ +C+    ++A +L+ VM+   ++PD V Y+TL++ F+K  + 
Sbjct: 482 QENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNS 541

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           E+ + L   M   G++ + +TY  +I+  + +
Sbjct: 542 EKAVMLFIKMTKVGITFNVKTYTILINLFISD 573



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 219/453 (48%), Gaps = 5/453 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+A++    Q G  + A +V +++K  G    +++++  +    +   + +  +++KEM 
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G + N+ +++++I   CKE ++++AL ++  M  SGI P+V  ++++I+  C+ GD++
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+K + +   M+ ++  P++  +  +I G+ K  +   A +    M K G+  +     
Sbjct: 403 SAIKFWEE---MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACN 459

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            ++  Y R     +AL L ++  + G+  N   YN  IH +      E AL +L  M+ +
Sbjct: 460 HILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKR 519

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           ++ PD   YS L     +    ++A  L  ++ +  +  +  +Y ILIN       +  A
Sbjct: 520 NVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVA 579

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L   M    + PD I Y +L+ G+C  G +  A  +++ M +    PN+V Y   IN 
Sbjct: 580 YRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINE 639

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG-IAV 566
             K    + A  L +  +  G+  D I Y  LI  +   G++  A A+F EM+  G    
Sbjct: 640 YLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTP 699

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           N V Y  LIN   K     QA +L + M   G+
Sbjct: 700 NVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 16/369 (4%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD--ALVRA---CTQIGATEGAYD 167
           ++L+ G     +  S ++F E +  +      +P+ F+  +L++      Q       + 
Sbjct: 389 SILIDGFCRKGDMDSAIKFWEEMTSN----NFSPSAFNYCSLIKGYYKSKQFANALKEFR 444

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           ++QKL +   ++   A N+ LS   +  +  +   L ++    G   N  ++N  I+ +C
Sbjct: 445 IMQKLGMWPDTI---ACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC 501

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           +    E+AL L   MLK  + P+VV ++ +I+   +  + E A+ LF KM  +    +  
Sbjct: 502 RGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVG---ITF 558

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+  +IN F    +++ A  +   M ++ +  +   Y +L+ G+   G    A  L 
Sbjct: 559 NVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           DEM + G  PN V Y   I+          A  +   M ++ + PD   Y++L    C  
Sbjct: 619 DEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNT 678

Query: 408 GCVKQAFKLHNQVLEE-HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           G + +A  L +++ +E     +   Y  LIN   K N    A++L   M  +GL     +
Sbjct: 679 GEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSS 738

Query: 467 YGTLIDGYC 475
            G++ + +C
Sbjct: 739 EGSVSESWC 747


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 175/625 (28%), Positives = 290/625 (46%), Gaps = 68/625 (10%)

Query: 75  KLALEFYTWVGENNR---FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
           ++ ++ + W+    +   FS+    S + + LL  +R F++   ++GNL + N     E 
Sbjct: 78  EIGVKLFDWLSSEKKDEFFSNGFACS-SFLKLLARYRIFNEIEDVLGNLRNENVKLTHEA 136

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           L  +L +Y       A   +L +A          YD +           + A N+ LS L
Sbjct: 137 LSHVLHAY-------AESGSLSKAVEIYDYVVELYDSVP---------DVIACNSLLSLL 180

Query: 192 VKLNEIGRFWKLYKEMVSCG-YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           VK   +G   K+Y EM   G  V+N +T  +++  +C E K+E    L       G  PN
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPN 239

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG------- 303
           +V +N II   C++GD+E A  +F+++ +      +P   T   +INGFCK G       
Sbjct: 240 IVFYNTIIGGYCKLGDIENAYLVFKELKL---KGFMPTLETFGTMINGFCKEGDFVASDR 296

Query: 304 -----------------------------RVEFAEEIRYAMIKAGIDC--NVRTYATLID 332
                                        +V+ AE I + +     DC  +V TY  LI+
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN---DCKPDVATYNILIN 353

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              + G  E A+   DE  K+GL+PNN+ Y   I       + + A  +L  M ++   P
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TY IL  GL  +G +  A  +  ++++  +  DA  YN+L++ LCK+     AK L 
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           S M+ R ++PD   Y TLIDG+ + G+ + A +V+    +   K ++V +N++I G C+ 
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD A + +       L+ D  TY+T+I+GY     +A A  +F  M       N V Y
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP-EEVIELHDDMV 630
             LIN  C  G ++ A E  K M L  ++P+ VTYTTL+   +K  S  E+ +   + M+
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
            +   P+  T+N ++   + + S +
Sbjct: 654 TNKCVPNEVTFNCLLQGFVKKTSGK 678



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 152/644 (23%), Positives = 273/644 (42%), Gaps = 108/644 (16%)

Query: 58  LTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           LT+  ++ V+  + +S  L  A+E Y +V E       + +  +++ LLV  RR  DA  
Sbjct: 132 LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARK 191

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           +   +               +D+Y  C         LV+     G  E    +I+    K
Sbjct: 192 VYDEMCDRGDS---------VDNYSTC--------ILVKGMCNEGKVEVGRKLIEGRWGK 234

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   +I  +N  +    KL +I   + ++KE+   G++  + TF  +I   CKE     +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294

Query: 236 LSLYY----RMLKSGIW-------------------------------PNVVCFNMIINE 260
             L      R L+  +W                               P+V  +N++IN 
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G  E A+    +    S   ++PN++++  +I  +CK    + A ++   M + G 
Sbjct: 355 LCKEGKKEVAVGFLDEA---SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             ++ TY  LI G    G  ++A+ +  +++ RG+ P+  +YN  +  L   G    A  
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           + S+M+D++I PD + Y+ L  G  R+G   +A K+ +  +E+ +  D   +N +I   C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +S  L  A   ++ M    L+PD  TY T+IDGY K  ++  A++++  M+K + KPN+V
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL----------------------------- 531
            Y S+ING C       A+   +  Q   L+                             
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651

Query: 532 --------DAITYNTLINGYF--INGKI-AEA-------FAMFSE----MRNVGIAVNKV 569
                   + +T+N L+ G+    +GK+ AE         ++FSE    M++ G + +  
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAA 711

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            YN  +  LC  G  + A      M+  G  PD V++  ++  F
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 166/397 (41%), Gaps = 35/397 (8%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++ D+E  +KLF  +     D    N    +  +    +       E++   +    +  
Sbjct: 73  RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKL 132

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
                + ++  YA  GS  +A+ + D +V+        +Y+S                  
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVVE--------LYDSV----------------- 167

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
                    PD    + L   L ++  +  A K+++++ +     D YS  IL+  +C  
Sbjct: 168 ---------PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNE 218

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +   ++L+     +G IP+I+ Y T+I GYCK G+IE A  V++ +K     P L  +
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAITY-NTLINGYFINGKIAEAFAMFSEMRN 561
            ++ING CK+    A+  LL   +  GL  ++ + N +I+  + +G   +       +  
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
                +   YNILIN LCK G  + A   +      G+IP+ ++Y  L+  + K+   + 
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             +L   M   G  PD  TY  +I  L+     +D V
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 26/357 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  L+      G  + A ++  KL  +G S     +N  +S L K    GRF 
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK---TGRFL 467

Query: 202 K---LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L+ EM+    + +   +  +I    +    +EA  ++   ++ G+  +VV  N +I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              C+ G L+ AL     M  M+ + ++P+  T++ II+G+ K   +  A +I   M K 
Sbjct: 528 KGFCRSGMLDEALAC---MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD-VEG 377
               NV TY +LI+G+   G  + A     EM  R L+PN V Y + I  L  E   +E 
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK 644

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCR----------NGCVKQAFKLHNQVLEEHMVG 427
           A++    M+     P+  T++ L +G  +          +G       L ++     M  
Sbjct: 645 AVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFH-RMKS 703

Query: 428 DAYS-----YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           D +S     YN  +  LC    +  A      M+ +G  PD +++  ++ G+C  GN
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 119/309 (38%), Gaps = 68/309 (22%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           + +   +   ++  +     K++   V  G   +V   N +I   C+   L+EAL+   R
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M +  + P+   ++ II+   +  D+  A+K+FR    M  +   PN VT+  +INGFC 
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR---YMEKNKCKPNVVTYTSLINGFCC 602

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS-EEALRLCDEMVKRGLMPNNV 360
            G  + AEE    M    +  NV TY TLI   A+  S+ E+A+   + M+    +PN V
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEV 662

Query: 361 V-------------------------------------------------YNSTIHWLFA 371
                                                             YNS +  L  
Sbjct: 663 TFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCV 722

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL--------------- 416
            G V+ A      M+ K   PD  +++ +  G C  G  KQ   +               
Sbjct: 723 HGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR 782

Query: 417 HNQVLEEHM 425
           ++QVLE+H+
Sbjct: 783 YSQVLEQHL 791


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 264/563 (46%), Gaps = 38/563 (6%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++ LLV  RR+DDA  L   ++  +S +         D+Y  C         LVR     
Sbjct: 175 LLKLLVEQRRWDDARKLYDEMLGEDSGA---------DNYSTC--------VLVRGLCLE 217

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E    +I+     G    +  +N  +    +  ++GR   L  EM + G++  + T+
Sbjct: 218 GRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTY 277

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I  L K+  LE+  SL+  M K G+ PNV  +N +I+  C+      A+ + ++M  
Sbjct: 278 GSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFA 337

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              D   P+ +T N +I G C  G V  AE      I+  ++ N  +Y  LI G+   G 
Sbjct: 338 SGCD---PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 394

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
              A  L  EM+ RG  P+ V + + IH L   G V  AL V   M ++ + PD   Y++
Sbjct: 395 LMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 454

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC+   +  A  +  ++LE+++  D + Y  LI+   +S NL  A+++   M  +G
Sbjct: 455 LISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 514

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA- 518
           + PDI++   +I GYC+ G +  A+    NM+KV   P+   Y ++I+G  K  +L+ A 
Sbjct: 515 VRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 574

Query: 519 KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           + L    +R    + +TY++LINGY   G    A  +F+ M+   ++ N V Y ILI  L
Sbjct: 575 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSL 634

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP----------------EEV 622
            K     +A    + M+L+   P+ VT   LV   + +C+P                + +
Sbjct: 635 FKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT-SCTPCVINSICCNTSEVHGKDAL 693

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
           + +   +V     P N  YNAII
Sbjct: 694 LVVFKKLVFDIGDPRNSAYNAII 716



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 212/437 (48%), Gaps = 4/437 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G +  V   N ++  L ++ + ++A  LY  ML      +     +++   C  G +E  
Sbjct: 164 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 223

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           LKL        G   +P+ V +N +I+G+C+ G +     +   M   G    + TY +L
Sbjct: 224 LKLIE---ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSL 280

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I+   + G  E+   L  EM KRGL PN  +YNS I  L        A+ +L  M     
Sbjct: 281 INCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGC 340

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  T++ L  GLC  G V++A     + +   +  +  SY  LI+  C    L AA  
Sbjct: 341 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASD 400

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL  M+ RG  PD++T+G LI G    G +  A+ V E M + +  P++ IYN +I+GLC
Sbjct: 401 LLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 460

Query: 511 KDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   L AAK++L+   ++    D   Y TLI+G+  +  + +A  +F  M + G+  + V
Sbjct: 461 KKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIV 520

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
             N +I   C+FG   +A   M  M   G IPD  TYTT+++ ++K  +    +    DM
Sbjct: 521 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 580

Query: 630 VLSGVSPDNQTYNAIIS 646
           +     P+  TY+++I+
Sbjct: 581 IKRKCKPNVVTYSSLIN 597



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 229/484 (47%), Gaps = 21/484 (4%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA 155
           S+C +V  L    R ++ L L+     A  +  + F   L+D Y                
Sbjct: 206 STCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGY---------------- 249

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C +     G   ++ +++ KG   ++  + + ++ L K  ++ +   L+ EM   G   N
Sbjct: 250 CRRGDMGRGLL-LLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPN 308

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V  +N VI ALCK     +A+ +  +M  SG  P+++ FN +I   C  G +  A    R
Sbjct: 309 VQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR 368

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +        + PN +++  +I+GFC  G +  A ++   M+  G   +V T+  LI G  
Sbjct: 369 E---AIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLV 425

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G   EAL + ++M +R + P+  +YN  I  L  +  +  A  +L +M++K++ PD F
Sbjct: 426 VAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEF 485

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+ L  G  R+  +  A K+   +  + +  D  S N +I   C+   ++ A   +S+M
Sbjct: 486 VYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNM 545

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              G IPD  TY T+I GY K GN+ GA++   +M K + KPN+V Y+S+ING CK    
Sbjct: 546 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 605

Query: 516 DAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           D+A+ L    Q   L  + +TY  LI   F   K+  A   F  M     + N V  + L
Sbjct: 606 DSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYL 665

Query: 575 INFL 578
           +N L
Sbjct: 666 VNGL 669



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 2/364 (0%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P  + H+ ++    +  R +  ++   +M  AG          L+  YA  G   +A  +
Sbjct: 96  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDM 155

Query: 347 CDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           C+ + ++ G +P     N  +  L  +   + A  +  +M+ +    D+++  +L +GLC
Sbjct: 156 CERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLC 215

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
             G V++  KL         +     YN+LI+  C+  ++     LL  M  +G +P ++
Sbjct: 216 LEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLV 275

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TYG+LI+   K G++E    ++  M+K    PN+ IYNS+I+ LCK  S   A  +L+  
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G   D IT+NTLI G    G + +A     E     +  N++ Y  LI+  C  G  
Sbjct: 336 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 395

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             A +L+  M+  G  PD VT+  L+          E + + + M    V PD   YN +
Sbjct: 396 MAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 455

Query: 645 ISPL 648
           IS L
Sbjct: 456 ISGL 459



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 24/380 (6%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+      G    A D++ ++  +GH+  +  +   +  LV   ++     + ++M 
Sbjct: 382 YTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 441

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 +VN +N++I  LCK+  L  A ++   ML+  + P+   +  +I+   +  +L 
Sbjct: 442 ERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 501

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A K+F     M    V P+ V+ N +I G+C+ G +  A      M K G   +  TY 
Sbjct: 502 DARKIFE---FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYT 558

Query: 329 TLIDGYARGGSSEEALR-LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           T+I GYA+ G+   ALR LCD M+KR   PN V Y+S I+     GD + A  + ++M  
Sbjct: 559 TVISGYAKQGNLNGALRWLCD-MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQA 617

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL-------- 439
           + + P+  TY+IL   L +   V +A      +L  H   +  + + L+N L        
Sbjct: 618 EALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVI 677

Query: 440 ----CKSNNLAAAKQLLSSMIVRGLIPDI-----ITYGTLIDGYCKGGNIEGAVQVYENM 490
               C ++ +     LL  ++ + L+ DI       Y  +I   C+   +  A+     M
Sbjct: 678 NSICCNTSEVHGKDALL--VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRM 735

Query: 491 KKVEKKPNLVIYNSIINGLC 510
            K    PN + + S++ G C
Sbjct: 736 AKKGYVPNPITFLSLLYGFC 755



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 1/194 (0%)

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G +P++     L+    +    + A ++Y+ M   +   +      ++ GLC +  ++  
Sbjct: 164 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 223

Query: 519 KSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L++A    G +  +  YN LI+GY   G +     +  EM   G     V Y  LIN 
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L K G  ++   L   M   G+ P+   Y +++    K  S  + + +   M  SG  PD
Sbjct: 284 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD 343

Query: 638 NQTYNAIISPLLGE 651
             T+N +I+ L  E
Sbjct: 344 IITFNTLITGLCHE 357



 Score = 38.9 bits (89), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           + +N +I++LC+   L EAL    RM K G  PN + F  ++   C VG
Sbjct: 710 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 170/613 (27%), Positives = 283/613 (46%), Gaps = 91/613 (14%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A+++ L+ +RRF+D LLL  +++SAN V P        D Y        ++ A+VR+  +
Sbjct: 101 ALLNGLLRFRRFNDVLLLFDDIVSAN-VQP--------DIY--------IYSAVVRSLCE 143

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI--------------------- 197
           +     A ++I  ++     +SI  +N  +  L K   I                     
Sbjct: 144 LKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVT 203

Query: 198 --GRFWK---LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
             G+F +   L+KEM   G   N  T++++I + C+  +++ A+    +M K+ I   V 
Sbjct: 204 YYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVY 263

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N +IN  C++G+   A   F +   M    + P  VT+  +I+G+C  G    A ++ 
Sbjct: 264 PYNSLINGYCKLGNASAAKYYFDE---MIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVY 320

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M   GI  N  T+  +I G  R     EA+RL  EM +R +MP+ V YN  I      
Sbjct: 321 NEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRS 380

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA-----------FKLHNQ-- 419
           G++  A  +L +M+ K   PD +TY  L  GLC  G V +A            KL+N   
Sbjct: 381 GNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCY 440

Query: 420 ----------------------VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
                                 ++E  +  D   Y ILI+   + ++  A   LL  M  
Sbjct: 441 SALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHN 500

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL PD + Y  +ID + K GN++ A  +++ M      PN+V Y ++INGLCK   +D 
Sbjct: 501 HGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDK 560

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFIN-----GKIAEAFAMFSEMRNVGIAVNKVGYN 572
           A+ L + +    L+  +T N +  G F++     G + +A  +   M   G     V YN
Sbjct: 561 AELLSKET----LVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYN 615

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           ILI   C+ G  ++A +L+  M  + I+PDY+TY+T++    K  + +E I+L   M+  
Sbjct: 616 ILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDK 675

Query: 633 GVSPDNQTYNAII 645
           G+ PD   Y+ ++
Sbjct: 676 GLKPDTLAYSFLV 688



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 264/590 (44%), Gaps = 16/590 (2%)

Query: 61  SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL----LL 116
           S V R + E +   K A E   W+ E N+   S+     ++H L   RR  +AL     L
Sbjct: 135 SAVVRSLCELKDFNK-AKEMIHWM-EFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCL 192

Query: 117 MGNLMSANSVS------PLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           M   + AN V+        E L   +    +C A    +  L+ +  + G  + A   + 
Sbjct: 193 MQKGLEANVVTYYGKFNEAELLFKEMGEKGLC-ANHITYSILIDSFCRRGEMDNAIGFLD 251

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K+       +++ +N+ ++   KL         + EM+  G    V T+  +I   C E 
Sbjct: 252 KMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEG 311

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +  +A  +Y  M   GI PN   F  II+  C+   +  A++LF   G M    ++P+ V
Sbjct: 312 EWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLF---GEMKERKIMPSEV 368

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +I G C+ G +  A  +   M+  G   +  TY  LI G    G   EA    D++
Sbjct: 369 TYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDL 428

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            K     NN+ Y++ +H    EG  + A+     M+++ +  D   Y+IL  G  R    
Sbjct: 429 HKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDT 488

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           +  F L  ++    +  DA  Y  +I+   K+ NL  A  L   M+  G +P+++TY  L
Sbjct: 489 RALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTAL 548

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+G CK G ++ A  + +     +  PN + Y   ++ L +  +++ A  L  A  +  L
Sbjct: 549 INGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFL 608

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
              ++YN LI G+   GKI EA  +   M +  I  + + Y+ +I   CK    Q+A +L
Sbjct: 609 ATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKL 668

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
              M+  G+ PD + Y+ LV         E+  EL D+M+  G+  ++ T
Sbjct: 669 WHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 226/469 (48%), Gaps = 30/469 (6%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M  C  +  V T + ++  L +  +  + L L+  ++ + + P++  ++ ++   C++ D
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR- 325
              A ++   M     +    + V +N +I+G CK  R+  A EI+  +++ G++ NV  
Sbjct: 147 FNKAKEMIHWMEF---NQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVT 203

Query: 326 -------------------------TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
                                    TY+ LID + R G  + A+   D+M K  +     
Sbjct: 204 YYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVY 263

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YNS I+     G+   A +   +MIDK + P   TY+ L  G C  G   +AFK++N++
Sbjct: 264 PYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEM 323

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
             + +  + Y++  +I+ LC++N +A A +L   M  R ++P  +TY  +I+G+C+ GNI
Sbjct: 324 TAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNI 383

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI-GLLDAITYNTL 539
             A  + + M      P+   Y  +I+GLC    +  AK  +    +    L+ + Y+ L
Sbjct: 384 SEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSAL 443

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           ++GY   G+  +A +    M   G+A++ V Y ILI+   +    +    L+K M  HG+
Sbjct: 444 VHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGL 503

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            PD V YT ++ R SK  + +E   L D MV  G  P+  TY A+I+ L
Sbjct: 504 RPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGL 552



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 109/222 (49%), Gaps = 4/222 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +    ++  ++   ++ G  + A+ +   +  +G   ++  +   ++ L K   + +   
Sbjct: 504 RPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAEL 563

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L KE +      N  T+   +  L +   +E+A+ L++ MLK G     V +N++I   C
Sbjct: 564 LSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFC 622

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++G +E A KL   M   + + +LP+ +T++ II   CK   ++ A ++ + M+  G+  
Sbjct: 623 RLGKIEEATKLLHGM---TDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKP 679

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +   Y+ L+ G    G  E+A  L DEM++RG+  N+V   S
Sbjct: 680 DTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 184/674 (27%), Positives = 290/674 (43%), Gaps = 92/674 (13%)

Query: 27  ANPSTEDIVFRAICVNLRQRKW---KILEQMAPSLTNSLVNRVVSEFRK-----SPKLAL 78
           A+ ST DIV     V L  R+W      ++++PS+T +    V   FR       P  AL
Sbjct: 15  ASTSTPDIVAELGRV-LSTRRWNKGSAYKRLSPSVTAA---HVADLFRAPVSPLDPATAL 70

Query: 79  EFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDS 138
            F+ WV     F H+  S  A++ LL   R                              
Sbjct: 71  AFFEWVARRPGFRHTAASHAALLQLLARRR------------------------------ 100

Query: 139 YEICKATPAVFDALVRACTQIGAT----EGAYDVIQKLKVKGHS---VSIHAWNNFLSHL 191
                  PA +D LV +      T      A D IQ ++  G     +S   +N  L  L
Sbjct: 101 ------APANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSL 154

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           ++ +      KLY  +V  G + +  T+N +I A CK+  L  A   +  + +SG+  + 
Sbjct: 155 LRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDT 214

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMS------------------------------ 281
              N ++   C+  DL  A  L   M +M                               
Sbjct: 215 YTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFM 274

Query: 282 --GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              D    N   +  +I G CK GR+  A  +   M   G+  +V TY  +IDGY + G 
Sbjct: 275 MVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGR 334

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            ++AL +   M + G  P++  YNS I+ L   G ++ A  +L+  I +   P   T++ 
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTN 393

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+   +  A ++ + ++  +   D  +Y +LIN L K   L  AK+ L+ M   G
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L P+++ Y ++IDGYCK G +  A++V++ M+     PN   Y S+I GL +D  L  A 
Sbjct: 454 LAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAM 513

Query: 520 SLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           +L+   Q  G+    I Y TLI G     +   AF +F  M   G+  ++  YN+L + L
Sbjct: 514 ALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDAL 573

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G   +A E    ++  G++   VTYT+LV  FSK  + +    L + MV  G   D 
Sbjct: 574 CKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 639 QTYNAIISPLLGEK 652
            TY+ ++  L  +K
Sbjct: 631 YTYSVLLQALCKQK 644



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 6/440 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G   N++ + L+I  LCKE ++ +A  L   M   G+ P+V  +N +I+  C+ G 
Sbjct: 275 MVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGR 334

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ AL +     +M  +   P+  T+N +I G C  G+++ AEE+    I  G    V T
Sbjct: 335 MKDALGI---KALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVIT 390

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  LI+GY +    ++ALR+   M+      +   Y   I+ L  +  ++ A   L++M 
Sbjct: 391 FTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF 450

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + P+   Y+ +  G C+ G V  A ++   +  E    +A++Y  LI  L +   L 
Sbjct: 451 ANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L++ M   G+ P +I Y TLI G CK    + A +++E M+K    P+   YN + 
Sbjct: 511 KAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLT 570

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           + LCK    + A S L   ++  +L  +TY +L++G+   G    A  +  +M N G   
Sbjct: 571 DALCKSGRAEEAYSFL--VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKA 628

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y++L+  LCK     +A  ++  M + G+  + V YT +++   K    +    L 
Sbjct: 629 DLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLF 688

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
           ++M+ SG  P   TY   IS
Sbjct: 689 NEMISSGHKPSATTYTVFIS 708



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 216/472 (45%), Gaps = 8/472 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G S+++H +   +  L K   I     L  EM   G V +V T+N +I   CK  ++++A
Sbjct: 279 GCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDA 338

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L +   M ++G  P+   +N +I   C  G L+ A +L    G ++     P  +T   +
Sbjct: 339 LGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLN--GAIA-RGFTPTVITFTNL 394

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ING+CK  R++ A  ++  MI +    +++ Y  LI+   +    +EA    +EM   GL
Sbjct: 395 INGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGL 454

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN V+Y S I      G V  AL V   M  +   P+ +TY  L  GL ++  + +A  
Sbjct: 455 APNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMA 514

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L  ++ E+ +     +Y  LI   CK +    A +L   M   GL PD   Y  L D  C
Sbjct: 515 LITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALC 574

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K G  E A         V  K   V Y S+++G  K  + D A  L++     G   D  
Sbjct: 575 KSGRAEEAYSFLVRKGVVLTK---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLY 631

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TY+ L+       K+ EA ++  +M   G+  N V Y I+I+ + K G +  A+ L   M
Sbjct: 632 TYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           I  G  P   TYT  ++ + K    EE   L  +M   GV+PD  TY+  I+
Sbjct: 692 ISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN 743



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 222/504 (44%), Gaps = 30/504 (5%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC-GYVENVNT----------------- 218
           H+ + HA    L  L +      + KL   M+SC G  E+V                   
Sbjct: 84  HTAASHA--ALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLV 141

Query: 219 -----FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
                +NL + +L +    E    LY  +++ G+ P+ V +N +I   C+ G L  A + 
Sbjct: 142 LSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F    ++    +  ++ T N ++ G+C+   +  A  +   M   G   N  +Y  LI G
Sbjct: 202 F---CLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQG 258

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
                   EAL L   MV+ G   N  +Y   I  L  EG +  A  +L +M  + + P 
Sbjct: 259 LYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPS 318

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
            +TY+ +  G C++G +K A  +   + +     D ++YN LI  LC    L  A++LL+
Sbjct: 319 VWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLN 377

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
             I RG  P +IT+  LI+GYCK   I+ A++V  NM     K +L  Y  +IN L K  
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC 437

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            L  AK  L      GL  + + Y ++I+GY   G +  A  +F  M + G   N   Y 
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYG 497

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI  L +     +A  L+  M   GI P  + YTTL+    K    +    L + M  +
Sbjct: 498 SLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKN 557

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
           G++PD Q YN +   L     AE+
Sbjct: 558 GLTPDEQAYNVLTDALCKSGRAEE 581



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 227/524 (43%), Gaps = 65/524 (12%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +++     +G + ++  + N ++   K   I    ++   M+S     ++  +
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-- 277
            ++I  L K+C+L+EA      M  +G+ PNVV +  II+  C+VG +  AL++F+ M  
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEH 486

Query: 278 ------------------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
                                           M  D + P  + +  +I G CK    + 
Sbjct: 487 EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDN 546

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M K G+  + + Y  L D   + G +EEA      +V++G++   V Y S + 
Sbjct: 547 AFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVD 603

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G+ + A  ++  M+++    D +TYS+L + LC+   + +A  + +Q+    +  
Sbjct: 604 GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKC 663

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +Y I+I+ + K      AK L + MI  G  P   TY   I  YCK G IE A  + 
Sbjct: 664 NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLI 723

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA------ITYNTLIN 541
             M++    P++V Y+  ING      +D A S L+      ++DA       TY  L+ 
Sbjct: 724 GEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR-----MVDASCEPNCWTYWLLLK 778

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            +     I   +   S M N  I +N V                   +L++ M+ HG+ P
Sbjct: 779 HFLKMSLINAHYIDTSGMWN-WIELNTVW------------------QLLERMMKHGLNP 819

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             VTY++++  F K    EE   L D M+   +SP+ + Y  +I
Sbjct: 820 TVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/519 (23%), Positives = 230/519 (44%), Gaps = 40/519 (7%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R DDAL +  N++S+N                 CK     +  L+    +    + A + 
Sbjct: 403 RIDDALRVKSNMISSN-----------------CKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + ++   G + ++  + + +    K+  +G   +++K M   G   N  T+  +IY L +
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + KL +A++L  +M + GI P V+ +  +I   C+  + + A +LF    +M  + + P+
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFE---MMEKNGLTPD 562

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              +N + +  CK GR   AEE    +++ G+     TY +L+DG+++ G+++ A  L +
Sbjct: 563 EQAYNVLTDALCKSGR---AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 619

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +MV  G   +   Y+  +  L  +  +  AL +L  M    +  +   Y+I+   + + G
Sbjct: 620 KMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEG 679

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A  L N+++       A +Y + I+  CK   +  A+ L+  M   G+ PD++TY 
Sbjct: 680 KHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYH 739

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY---------NSIINGLCKDAS----- 514
             I+G    G ++ A    + M     +PN   Y          S+IN    D S     
Sbjct: 740 IFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNW 799

Query: 515 --LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             L+    LL+   + GL    +TY+++I G+    ++ EA  +   M    I+ N+  Y
Sbjct: 800 IELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIY 859

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            +LI   C    + +    +  MI  G  P   +Y  L+
Sbjct: 860 TMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLI 898



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 206/454 (45%), Gaps = 50/454 (11%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           FD+A  L   +M  N ++P E            +A   + DAL ++    G  E AY  +
Sbjct: 544 FDNAFRLF-EMMEKNGLTPDE------------QAYNVLTDALCKS----GRAEEAYSFL 586

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            +   KG  ++   + + +    K         L ++MV+ G   ++ T+++++ ALCK+
Sbjct: 587 VR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            KL EALS+  +M  SG+  N+V + +II+E  + G  + A  LF +M + SG    P++
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEM-ISSGHK--PSA 700

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+   I+ +CK+G++E AE +   M + G+  +V TY   I+G    G  + A      
Sbjct: 701 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR 760

Query: 350 MVKRGLMPNNVVYNSTI-----------HWLFAEG-----DVEGALFVLSDMIDKHICPD 393
           MV     PN   Y   +           H++   G     ++     +L  M+   + P 
Sbjct: 761 MVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPT 820

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS-----YNILINYLCKSNNLAAA 448
             TYS +  G C+   +++A      VL +HM+G A S     Y +LI   C        
Sbjct: 821 VVTYSSIIAGFCKATRLEEAC-----VLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKD 875

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
              ++ MI  G  P + +Y  LI G C  G+ + A  ++ ++  ++   N V +  + +G
Sbjct: 876 VSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935

Query: 509 LCKDASLDAAKSLLQA-SQRIGLLDAITYNTLIN 541
           L K   +D    LL A   R   +D+ +Y+ L +
Sbjct: 936 LLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTD 969



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 133/348 (38%), Gaps = 83/348 (23%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E CKA    +  L++A  +      A  ++ ++ V G   +I A+   +S ++K  +   
Sbjct: 624 EGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L+ EM+S G+  +  T+ + I + CK  ++EEA  L   M + G+ P+VV +++ IN
Sbjct: 684 AKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN 743

Query: 260 EACQVGDLEFA----------------------LKLFRKMGV------------------ 279
               +G ++ A                      LK F KM +                  
Sbjct: 744 GCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELN 803

Query: 280 --------MSGDSVLPNSVTHNCIINGFCKLGRVE------------------------- 306
                   M    + P  VT++ II GFCK  R+E                         
Sbjct: 804 TVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLI 863

Query: 307 --------FAEEIRYA--MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
                   F +++ +   MI+ G    + +Y  LI G    G  + A  L  +++     
Sbjct: 864 KCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYN 923

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            N V +      L   G V+    +L+ M ++H   D  +YS+LT  +
Sbjct: 924 HNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971


>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 237/470 (50%), Gaps = 5/470 (1%)

Query: 24  KQFANPSTEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYT 82
           +    P  +D+ F  +   +L    W  L  M+  LT   +  ++ + +K   L+ EF+ 
Sbjct: 120 RTIPEPRGQDLDFVNVAHSHLINSDWAKLNSMSTGLTPYRMKHIMLKIKKDHVLSFEFFN 179

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS-PLEFLEGLLDSYEI 141
           WV   N    +LE+   I+H+L    +F  A  ++  ++ + S+  P +  E +L SY I
Sbjct: 180 WVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRI 239

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C ++P VFD+L +   Q+     A DV  ++K  G    + + N ++S  + L       
Sbjct: 240 CDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIAL 299

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             Y+EM       NV T N+V+ A CK  KLE+A+ ++ RM   G  P +  +N +I   
Sbjct: 300 TFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGY 359

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G L   +KL     +M  + V P+ VT N +INGFC+ G++  A +I   M    + 
Sbjct: 360 CNKGLLNSGMKL---KILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVV 416

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TLI+GY++ G+SE   RL DEM++ G+  + + YN+ I  L  EG  + A ++
Sbjct: 417 PNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYL 476

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           + ++  +++ P+  T+S L  G C     ++AF+L+  ++      + +++ +LI+  CK
Sbjct: 477 VKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCK 536

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           + +   A +++  M  R + PD  T   L  G    G  E A+++ + M+
Sbjct: 537 NEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEME 586



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 168/355 (47%), Gaps = 7/355 (1%)

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVR--TYATLIDGYARGGSSEEALRLCDEMVK 352
           ++ G    G ++   ++  A++ +   C+     + +L   YA+      A+ +  +M  
Sbjct: 213 VLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKD 272

Query: 353 RGLMPNNVVYNSTIHWLFA--EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            G +P     N+ I    +   GD+  AL    +M    I P+ +T +++    C+ G +
Sbjct: 273 YGFLPRVESCNAYISASISLQRGDI--ALTFYREMQRYRISPNVYTLNMVMCAFCKWGKL 330

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           ++A ++  ++          SYN LI   C    L +  +L   M   G+ PD +T+ TL
Sbjct: 331 EKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTL 390

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+G+C+GG +  A +++  MK  +  PN + YN++ING  +  + +    L     R G+
Sbjct: 391 INGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGI 450

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D +TYN LI G  + G+  +A  +  E+    +  N   ++ LI   C     ++A +
Sbjct: 451 KADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQ 510

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           L K MI  G  P+Y T+  L++ F KN   +  +E+  +M    ++PD+ T + +
Sbjct: 511 LYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSEL 565



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 185/428 (43%), Gaps = 27/428 (6%)

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMIIN--EACQVGDLEFA 270
           + + T++++++ L K  K + A S+   +L SG I      F  I+     C      F 
Sbjct: 189 QTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFD 248

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             LF+    M     L N++   C +  +  L RVE               CN    A++
Sbjct: 249 -SLFKTYAQMKK---LRNAIDVFCQMKDYGFLPRVE--------------SCNAYISASI 290

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
                RG   + AL    EM +  + PN    N  +      G +E A+ V   M     
Sbjct: 291 --SLQRG---DIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGF 345

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P   +Y+ L  G C  G +    KL   + +  +  D  ++N LIN  C+   L  A +
Sbjct: 346 SPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANK 405

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           + S M    ++P+ ITY TLI+GY + GN E   ++++ M +   K +++ YN++I GLC
Sbjct: 406 IFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLC 465

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
            +     A  L++   R  L+ ++ T++ LI G  +      AF ++  M   G   N  
Sbjct: 466 MEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYH 525

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            + +LI+  CK   +  A E+++ M    I PD  T + L      +   E  ++L  +M
Sbjct: 526 TFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEM 585

Query: 630 VLSGVSPD 637
            +  + P+
Sbjct: 586 EMKHLMPE 593



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 1/235 (0%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A   + ++    +  + Y+ N+++   CK   L  A ++   M   G  P I +Y TLI 
Sbjct: 298 ALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIA 357

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GYC  G +   +++   M+K   +P+ V +N++ING C+   L  A  +    +   ++ 
Sbjct: 358 GYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVP 417

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + ITYNTLINGY   G       +  EM   GI  + + YN LI  LC  G  ++A  L+
Sbjct: 418 NTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLV 477

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           K +    ++P+  T++ L+T      + E   +L+  M+ SG  P+  T+  +IS
Sbjct: 478 KELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLIS 532



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P++ T   ++  +CK G +E A++V++ M+ +   P +  YN++I G C    L++   L
Sbjct: 312 PNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKL 371

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
               ++ G+  D +T+NTLING+   GK+ EA  +FSEM+   +  N + YN LIN   +
Sbjct: 372 KILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQ 431

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G  +    L   M+ +GI  D +TY  L+         ++   L  ++    + P++ T
Sbjct: 432 VGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSST 491

Query: 641 YNAIISPLLGEKSAE 655
           ++A+I+     K++E
Sbjct: 492 FSALITGQCVRKNSE 506



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 3/247 (1%)

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYS--YNILINYLCKSNNLAAAKQLLSSMIVRG 459
           KG+  +G +    KL   +L  + + D+    ++ L     +   L  A  +   M   G
Sbjct: 215 KGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYG 274

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +P + +    I         + A+  Y  M++    PN+   N ++   CK   L+ A 
Sbjct: 275 FLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAI 334

Query: 520 SLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            + +  + +G    IT YNTLI GY   G +     +   M   G+  + V +N LIN  
Sbjct: 335 EVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGF 394

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C+ G   +A ++   M  + ++P+ +TY TL+  +S+  + E    LHD+M+ +G+  D 
Sbjct: 395 CRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADI 454

Query: 639 QTYNAII 645
            TYNA+I
Sbjct: 455 LTYNALI 461


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 237/451 (52%), Gaps = 5/451 (1%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           + L+ A  +    + AYD+ +       S     ++  ++   K  +  + ++L  EM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V +   +N +I  LC   +++ AL ++YR ++    P+V+ + ++++  C+   +  
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSARISD 120

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A  +   M + +G    PN VT+N +INGFCKLG ++ A  +   M++     +V TY  
Sbjct: 121 ASLILEDM-IEAG--CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDGY +    ++  +L  EMVK G  PN + YN+ +  L   G    A  +   M+ + 
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P HFT++++    C+ G +  A++L   + +   + D Y+YNI+I+  C++N +  A+
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           QLL  M   G  PD++TY +++ G CK   ++ A +VYE ++      ++V  +++I+GL
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 357

Query: 510 CKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   LD A+ LL+  +R G   D + Y  LI+G+    ++ ++ A FSEM + G     
Sbjct: 358 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 417

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGI 599
           + Y+I+I+ LCK    +    L+K M+  G+
Sbjct: 418 ITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 222/452 (49%), Gaps = 7/452 (1%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRML 243
           N  LS  V+  +    + L+K  + CG    +  T++ +I   CK    ++A  L   M 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHL-CGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K GI P+   +N II   C  G ++ AL  +R M         P+ +T+  +++  CK  
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCA----PSVITYTILVDALCKSA 116

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R+  A  I   MI+AG   NV TY TLI+G+ + G+ +EA+ L ++M++    P+   YN
Sbjct: 117 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 176

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             I     +   +    +L +M+     P+  TY+ L   L ++G    AF L   +L  
Sbjct: 177 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
                 +++N++I+  CK   L  A +L   M  RG +PDI TY  +I G C+   I+ A
Sbjct: 237 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA 296

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLING 542
            Q+ E M +    P++V YNSI++GLCK + +D A  + +  +  G  LD +T +TLI+G
Sbjct: 297 RQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 356

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              + ++ +A  +  EM   G A + V Y ILI+  CK     ++      M+  G +P 
Sbjct: 357 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 416

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            +TY+ ++ +  K+    +   L   M+  GV
Sbjct: 417 VITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 219/438 (50%), Gaps = 5/438 (1%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N ++ A  ++ K +EA  L+   L     P+ + ++ +IN  C+  D + A   +R +  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQA---YRLLDE 58

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    ++P++  +N II G C  GRV+ A  + Y  ++     +V TY  L+D   +   
Sbjct: 59  MEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSAR 117

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A  + ++M++ G  PN V YN+ I+     G+++ A+ + + M++    PD FTY+I
Sbjct: 118 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 177

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+    +   KL  ++++     +  +YN L++ L KS     A  L   M+ R 
Sbjct: 178 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 237

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P   T+  +ID +CK G ++ A ++++ M      P++  YN +I+G C+   +D A+
Sbjct: 238 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 297

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL+     G   D +TYN++++G     ++ EA+ ++  +RN G  ++ V  + LI+ L
Sbjct: 298 QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGL 357

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK      A +L++ M  +G  PD V YT L+  F K    ++ +    +M+  G  P  
Sbjct: 358 CKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTV 417

Query: 639 QTYNAIISPLLGEKSAED 656
            TY+ +I  L       D
Sbjct: 418 ITYSIVIDKLCKSARVRD 435



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 161/349 (46%), Gaps = 3/349 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   +  LV A  +      A  +++ +   G + ++  +N  ++   KL  +    
Sbjct: 98  CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 157

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ +M+      +V T+N++I   CK+ + ++   L   M+K G  PN + +N +++  
Sbjct: 158 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 217

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G    A  L +   +M      P+  T N +I+ FCK+G+++ A E+   M   G  
Sbjct: 218 VKSGKYIDAFNLAQ---MMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL 274

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY  +I G  R    ++A +L + M + G  P+ V YNS +  L     V+ A  V
Sbjct: 275 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 334

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              + +     D  T S L  GLC++  +  A KL  ++       D  +Y ILI+  CK
Sbjct: 335 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 394

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           ++ L  +    S M+ +G +P +ITY  +ID  CK   +     + + M
Sbjct: 395 ADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/419 (22%), Positives = 191/419 (45%), Gaps = 23/419 (5%)

Query: 45  QRKWKILEQMAPS---LTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           Q+ +++L++M        N++ N ++     + ++      +       + S+ +   +V
Sbjct: 50  QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILV 109

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGA 161
             L    R  DA L++ +++ A                  C      ++ L+    ++G 
Sbjct: 110 DALCKSARISDASLILEDMIEAG-----------------CAPNVVTYNTLINGFCKLGN 152

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            + A  +  ++     S  +  +N  +    K        KL +EMV  G   N  T+N 
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 212

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           ++ +L K  K  +A +L   ML+    P+   FN++I+  C+VG L+ A +LF+   +M+
Sbjct: 213 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ---LMT 269

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
               LP+  T+N +I+G C+  R++ A ++   M +AG   +V TY +++ G  +    +
Sbjct: 270 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 329

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA  + + +   G   + V  ++ I  L     ++ A  +L +M      PD   Y+IL 
Sbjct: 330 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 389

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
            G C+   + ++    +++L++  V    +Y+I+I+ LCKS  +     LL +M+ RG+
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 285/575 (49%), Gaps = 17/575 (2%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVG---ENNRFSHSLESSCAIVHLLVNW 107
           L  +   +T  +  RV+S+    P   L F+ ++     N      L++   ++  L   
Sbjct: 47  LHSIISCITPHVTYRVLSQPILQPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEA 106

Query: 108 RRFDDALLLMGNLMSANSVS-PLEFLEGLLDSYEICKATPAVFDALVRACTQ---IGATE 163
           R+F     ++  L++ + +  P+  +  L+D +E         D L R C+       T 
Sbjct: 107 RKFATMKSILNGLVTDSDIECPVSSIVDLVDEFE-SHFVEKFCDMLFRVCSDNRLFDETI 165

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLV 222
             YD +++   KG  +   +    L  L +  E+    + +  MV     E  V +  LV
Sbjct: 166 RVYDYVEE---KGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLV 222

Query: 223 IYALCKECKLEEALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           I  LC+  ++E+A  L   M+  GI  PNV  +N ++N      D +   ++ +   +M 
Sbjct: 223 IDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILK---LME 279

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
            + V+ +  T++ +I  +   G +E AE+I   M +  I+ +V  Y+++I    R G+ +
Sbjct: 280 KEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMK 339

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            A  L DEM +R ++PN   Y + I  +   G +E A  +L +M  K +  +   ++   
Sbjct: 340 RAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM 399

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G CR G + +A +L   + ++ +  D ++YNIL N LCK +    AK +L+SM+ +G+ 
Sbjct: 400 DGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVK 459

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P+++T+   I+ YCK GN+  A +++ +M+K  + PN++ YN++I+  CK   +  A  +
Sbjct: 460 PNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI 519

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                  GLL D  TY++LI+G  I G++ EA  +F+EMR  GI  N   Y  +I+ L K
Sbjct: 520 KSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSK 579

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            G   +A +L   M+  G+IPD   +T+LV  F K
Sbjct: 580 EGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 238/469 (50%), Gaps = 42/469 (8%)

Query: 216 VNTFNLVIYALCKECKL-EEALSLY-YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
           V  F  +++ +C + +L +E + +Y Y   K  +     CF +++    + G+++F ++ 
Sbjct: 144 VEKFCDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALK-RCGEVDFCVRF 202

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI-DCNVRTYATLID 332
           F +M   +   +   S+T   +I+  C+ G VE A+E+   M+  GI   NV TY TL++
Sbjct: 203 FHRMVESNKFEIRVQSLT--LVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLN 260

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
            Y      +    +   M K  ++ +   Y+  I W  + GD+E A  +  +M +K+I  
Sbjct: 261 AYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEM 320

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + YS +     R G +K+AF L +++ +  +V +A++Y  LI  +CK+  + AA+ LL
Sbjct: 321 DVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILL 380

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK-------------------- 492
             M  +G+  +++ + T +DGYC+ G ++ A+++   M+K                    
Sbjct: 381 LEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKL 440

Query: 493 -------------VEK--KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITY 536
                        VEK  KPN+V +   I   CK+ +L  A+ L +  ++ G + + ITY
Sbjct: 441 HRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITY 500

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTLI+ Y    K+ +A  + SEM N G+  +   Y+ LI+  C  G   +A +L   M L
Sbjct: 501 NTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRL 560

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            GI  +  TYT++++  SK    +E  +L+D+M+  G+ PD++ + +++
Sbjct: 561 KGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 196/412 (47%), Gaps = 46/412 (11%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKG-HSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           V D L R     G  E A +++ ++  KG    ++  +N  L+  V   +     ++ K 
Sbjct: 222 VIDVLCRR----GEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKL 277

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M     V +V T++++I        +EEA  ++  M +  I  +V  ++ +I+ + ++G+
Sbjct: 278 MEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGN 337

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A  LF +M   S   ++PN+ T+  +I G CK G++E AE +   M   G+D N+  
Sbjct: 338 MKRAFALFDEM---SQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVI 394

Query: 327 YATLIDGYARGGSSEEALRL-----------------------------------CDEMV 351
           + T +DGY R G  +EALRL                                    + MV
Sbjct: 395 FNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMV 454

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++G+ PN V +   I     EG++  A  +  DM  K   P+  TY+ L    C+   VK
Sbjct: 455 EKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVK 514

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           QA K+ ++++ + ++ D Y+Y+ LI+  C    +  A +L + M ++G+  ++ TY ++I
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMI 574

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK---DASLDAAKS 520
            G  K G  + A ++Y+ M K+   P+  ++ S++    K    A LD  K+
Sbjct: 575 SGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPLTHAGLDIQKA 626



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 153/334 (45%), Gaps = 22/334 (6%)

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           + I+C V +   L+D +     S    + CD + +  +  +N +++ TI           
Sbjct: 123 SDIECPVSSIVDLVDEF----ESHFVEKFCDMLFR--VCSDNRLFDETIR---------- 166

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-DAYSYNILI 436
              V   + +K +  +  +  +L   L R G V    +  ++++E +       S  ++I
Sbjct: 167 ---VYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVI 223

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLI-PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           + LC+   +  AK+L+  M+ +G++ P++ TY TL++ Y    + +G  ++ + M+K + 
Sbjct: 224 DVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQV 283

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
             ++  Y+ +I        ++ A+ + +  +   + +D   Y+++I+     G +  AFA
Sbjct: 284 VFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFA 343

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F EM    I  N   Y  LI  +CK G  + A  L+  M   G+  + V + T +  + 
Sbjct: 344 LFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYC 403

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +    +E + L   M   G++ D  TYN + + L
Sbjct: 404 RRGKMDEALRLQAIMEKKGINADVFTYNILANGL 437


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 230/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   + F +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +   M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M+ K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +   L  +M  +G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMN 430



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P+   Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+   G++  A  ++  M +  +  + + YN LI  LCK G  +QA +
Sbjct: 244 VPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAND 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M++ G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+ +A  +F EM   G+  N V +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    K    ++  +L D+MV+
Sbjct: 251 TTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVM 310

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 311 KGLKPDKITYTTLI 324


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 227/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +              L HL+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  YKE++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN  I+ L  +GD
Sbjct: 238 MLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD  TY+ L  G C+ G +  AF+   +++EE++  D  +Y  
Sbjct: 298 LKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 158/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A  +  A+ K G+  +V +Y TL++GY R G  +E  RL   M  
Sbjct: 146 NILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK GN++ A +    M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 1/286 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R G + + F+L + + 
Sbjct: 145 FNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMX 204

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK   +  A +L   M+V+GL+P+ +T+ TLIDG+CK G ++
Sbjct: 205 ASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 264

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN +I GLCK   L  A  L+      GL  D ITY TLI
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLI 324

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 325 DGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLK 384

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 385 PDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A  +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK+  +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 244 VPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQAND 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K  + +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E    D
Sbjct: 364 QEGRXVD 370



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E        +   ++ +L K           
Sbjct: 71  DIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 131 KEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+ +A  +F EM   G+  N V +
Sbjct: 191 GDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY  L+    K    ++  +L  +M +
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSM 310

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 311 KGLKPDKITYTTLI 324


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 165/650 (25%), Positives = 306/650 (47%), Gaps = 62/650 (9%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD-- 111
           M P L    V  V+ + +K P  ALE +  + +   F H+L +  +++  L  + +F+  
Sbjct: 1   MGPPLLPKHVTAVI-KCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59

Query: 112 DALLL------------------MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV 153
           + +L+                  M N      V     +   +D Y+ C+ T   ++A++
Sbjct: 60  EEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIM 118

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAW--------------------NNFLSHLVK 193
                 G  + A+ V  +++ +G +  ++++                    NN  S   +
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE 178

Query: 194 LNEI------GRFWK---------LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           +N +      G F++         L+ +M++ G    ++TFN ++  LCK+  ++E   L
Sbjct: 179 MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             +++K G+ PN+  +N+ I   CQ G+L+ A+   R +G +      P+ +T+N +I G
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV---RMVGCLIEQGPKPDVITYNNLIYG 295

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK  + + AE     M+  G++ +  TY TLI GY +GG  + A R+  + V  G +P+
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
              Y S I  L  EG+   AL + ++ + K I P+   Y+ L KGL   G + +A +L N
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ E+ ++ +  ++NIL+N LCK   ++ A  L+  MI +G  PDI T+  LI GY    
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYN 537
            +E A+++ + M      P++  YNS++NGLCK +   D  ++     ++    +  T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-IL 596
            L+       K+ EA  +  EM+N  +  + V +  LI+  CK G    A  L + M   
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +     TY  ++  F++  +     +L  +MV   + PD  TY  ++ 
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 266/516 (51%), Gaps = 17/516 (3%)

Query: 152 LVRACTQIGA-------TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           +V  CT +G         EG Y++  K+   G S+ +  +N  L  L K  ++    KL 
Sbjct: 181 VVAYCTVVGGFYEENFKAEG-YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            +++  G + N+ T+NL I  LC+  +L+ A+ +   +++ G  P+V+ +N +I   C+ 
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
              + A +++  +G M  + + P+S T+N +I G+CK G V+ AE I    +  G   + 
Sbjct: 300 SKFQEA-EVY--LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY +LIDG    G +  AL L +E + +G+ PN ++YN+ I  L  +G +  A  + ++
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M +K + P+  T++IL  GLC+ GCV  A  L   ++ +    D +++NILI+       
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A ++L  M+  G+ PD+ TY +L++G CK    E  ++ Y+ M +    PNL  +N 
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV- 562
           ++  LC+   LD A  LL+  +   +  DA+T+ TLI+G+  NG +  A+ +F +M    
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            ++ +   YNI+I+   +      A +L + M+   + PD  TY  +V  F K  +    
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +   +M+ +G  P   T   +I+ L      ED+V
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCL----CVEDRV 688



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 234/482 (48%), Gaps = 12/482 (2%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKL------YKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           H  + + S + KL   G+F  +       +E V    +E V    +  Y   ++ K++EA
Sbjct: 38  HTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYG--RKGKVQEA 95

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           ++++ RM      P V  +N I++     G  + A K++ +M       + P+  +    
Sbjct: 96  VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM---RDRGITPDVYSFTIR 152

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           +  FCK  R   A  +   M   G + NV  Y T++ G+       E   L  +M+  G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
                 +N  +  L  +GDV+    +L  +I + + P+ FTY++  +GLC+ G +  A +
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   ++E+    D  +YN LI  LCK++    A+  L  M+  GL PD  TY TLI GYC
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           KGG ++ A ++  +       P+   Y S+I+GLC +   + A +L   +   G+  + I
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            YNTLI G    G I EA  + +EM   G+      +NIL+N LCK GC   A  L+KVM
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           I  G  PD  T+  L+  +S     E  +E+ D M+ +GV PD  TYN++++ L      
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512

Query: 655 ED 656
           ED
Sbjct: 513 ED 514



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 241/519 (46%), Gaps = 49/519 (9%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           + F+ L+R   + G  +    ++ K+  +G   ++  +N F+  L +  E+    ++   
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           ++  G   +V T+N +IY LCK  K +EA     +M+  G+ P+   +N +I   C+ G 
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336

Query: 267 LEFALKLFRKMGVMSGDSV----LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++ A ++        GD+V    +P+  T+  +I+G C  G    A  +    +  GI  
Sbjct: 337 VQLAERIV-------GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVV----------------- 361
           NV  Y TLI G +  G   EA +L +EM ++GL+P     N++                 
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449

Query: 362 --------------YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
                         +N  IH    +  +E AL +L  M+D  + PD +TY+ L  GLC+ 
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
              +   + +  ++E+    + +++NIL+  LC+   L  A  LL  M  + + PD +T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQAS- 525
           GTLIDG+CK G+++GA  ++  M++  K   +   YN II+   +  ++  A+ L Q   
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            R    D  TY  +++G+   G +   +    EM   G   +      +IN LC      
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           +A  ++  M+  G++P+ V     V +  +  +P+ V+E
Sbjct: 690 EAAGIIHRMVQKGLVPEAVNTICDVDK-KEVAAPKLVLE 727



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 203/434 (46%), Gaps = 23/434 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL-LDSYEICKATPAVFDALVRACTQ 158
           +++ L    +F +A + +G +++          EGL  DSY         ++ L+    +
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVN----------EGLEPDSY--------TYNTLIAGYCK 333

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  + A  ++      G       + + +  L    E  R   L+ E +  G   NV  
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I  L  +  + EA  L   M + G+ P V  FN+++N  C++G +  A  L +   
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK--- 450

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           VM      P+  T N +I+G+    ++E A EI   M+  G+D +V TY +L++G  +  
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E+ +     MV++G  PN   +N  +  L     ++ AL +L +M +K + PD  T+ 
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY-SYNILINYLCKSNNLAAAKQLLSSMIV 457
            L  G C+NG +  A+ L  ++ E + V  +  +YNI+I+   +  N+  A++L   M+ 
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           R L PD  TY  ++DG+CK GN+    +    M +    P+L     +IN LC +  +  
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690

Query: 518 AKSLLQASQRIGLL 531
           A  ++    + GL+
Sbjct: 691 AAGIIHRMVQKGLV 704



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/324 (24%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    +++ L++  +  G    A  +  ++  KG    +  +N  ++ L K+  +     
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L K M+S GY  ++ TFN++I+    + K+E AL +   ML +G+ P+V  +N ++N  C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +    E  ++ ++ M V  G +  PN  T N ++   C+  +++ A  +   M    ++ 
Sbjct: 508 KTSKFEDVMETYKTM-VEKGCA--PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFV 381
           +  T+ TLIDG+ + G  + A  L  +M +   +  +   YN  IH    + +V  A  +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+D+ + PD +TY ++  G C+ G V   +K   +++E   +    +   +IN LC 
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684

Query: 442 SNNLAAAKQLLSSMIVRGLIPDII 465
            + +  A  ++  M+ +GL+P+ +
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVPEAV 708


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 231/449 (51%), Gaps = 4/449 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +   L+ + K+N+      LY +M + G   ++ +F ++I+  C+  +L  AL+L 
Sbjct: 78  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M+K G  P++V    ++N  CQ    + A+ L   +  M G   +PN V +N +ING 
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL---VDSMDGFGFVPNVVIYNTVINGL 194

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK   +  A E+ Y M K GI  +  TY TLI G +  G   +A RL  +MVKR + PN 
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + + + I     EG++  A  +  +MI + + P+ FTY+ L  G C +GC+  A  + + 
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +    D  +YN LI   CKS  +    +L   M  +GL+ D  TY TLI GYC+ G 
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           +  A +V+  M      P++V YN +++ LC +  ++ A  +++  Q+  + +D ITYN 
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G     K+ EA+ +F  +   G+  + + Y  +I+ LC+ G  ++A +L + M   G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            +P    Y   +     + S E +   H+
Sbjct: 495 FMPSERIYDETLRDHYTSLSAELIKAAHE 523



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 225/435 (51%), Gaps = 10/435 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           +  P++ D   R  T I A    +D++     K++  G S  ++++   +    + + + 
Sbjct: 74  RPIPSIVD-FTRVLTVI-AKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLS 131

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L  +M+  G+  ++ T   ++   C+  + +EA+SL   M   G  PNVV +N +I
Sbjct: 132 LALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N  C+  DL  AL++F     M    +  ++VT+N +I+G    GR   A  +   M+K 
Sbjct: 192 NGLCKNRDLNNALEVFY---CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            ID NV  +  LID + + G+  EA  L  EM++R ++PN   YNS I+     G +  A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
            ++   M+ K   PD  TY+ L  G C++  V+   KL  ++  + +VGDA++YN LI+ 
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C++  L  A+++ + M+  G+ PDI+TY  L+D  C  G IE A+ + E+++K E   +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           ++ YN II GLC+   L  A  L ++  R G+  DAI Y T+I+G    G   EA  +  
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488

Query: 558 EMRNVGIAVNKVGYN 572
            M+  G   ++  Y+
Sbjct: 489 RMKEDGFMPSERIYD 503



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 227/467 (48%), Gaps = 7/467 (1%)

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
           H +K ++    + L+ EM+    + ++  F  V+  + K  K +  + LY++M   GI  
Sbjct: 56  HCIKFDDA---FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISH 112

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           ++  F ++I+  C+   L  AL L  KM  +      P+ VT   ++NGFC+  R + A 
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLG---FRPSIVTLGSLLNGFCQGNRFQEAV 169

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +  +M   G   NV  Y T+I+G  +      AL +   M K+G+  + V YN+ I  L
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G    A  +L DM+ + I P+   ++ L     + G + +A  L+ +++   +V + 
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           ++YN LIN  C    L  AK +   M+ +G  PD++TY TLI G+CK   +E  ++++  
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M       +   YN++I+G C+   L+ A+ +       G+  D +TYN L++    NGK
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I +A  M  +++   + V+ + YNI+I  LC+    ++A  L + +   G+ PD + Y T
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +++   +     E  +L   M   G  P  + Y+  +       SAE
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 237/524 (45%), Gaps = 31/524 (5%)

Query: 9   LYKSNSP---LSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN- 64
           L + N+P   LSR+F  G    +   E +     C+          E +      S+V+ 
Sbjct: 24  LERGNNPETSLSRSFS-GASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDF 82

Query: 65  -RVVSEFRKSPKLALEFYTWVG-ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS 122
            RV++   K  K  +  Y +   EN   SH L S   ++H      R   AL L+G +M 
Sbjct: 83  TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 142

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
                 +  L  LL+ +                  Q    + A  ++  +   G   ++ 
Sbjct: 143 LGFRPSIVTLGSLLNGF-----------------CQGNRFQEAVSLVDSMDGFGFVPNVV 185

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  ++ L K  ++    +++  M   G   +  T+N +I  L    +  +A  L   M
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           +K  I PNV+ F  +I+   + G+L  A  L+++   M   SV+PN  T+N +INGFC  
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE---MIRRSVVPNVFTYNSLINGFCIH 302

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +  A+ +   M+  G   +V TY TLI G+ +    E+ ++L  EM  +GL+ +   Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ IH     G +  A  V + M+D  + PD  TY+IL   LC NG +++A  +   + +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             M  D  +YNI+I  LC+++ L  A  L  S+  +G+ PD I Y T+I G C+ G    
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           A ++   MK+    P+  IY+  +    +D     +  L++A+ 
Sbjct: 483 ADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIKAAH 522



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 1/230 (0%)

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D YS+ ILI+  C+ + L+ A  LL  M+  G  P I+T G+L++G+C+G   + AV + 
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           ++M      PN+VIYN++INGLCK+  L+ A  +    ++ G+  DA+TYNTLI+G   +
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G+  +A  +  +M    I  N + +  LI+   K G   +AR L K MI   ++P+  TY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +L+  F  +    +   + D MV  G  PD  TYN +I+     K  ED
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 163/541 (30%), Positives = 265/541 (48%), Gaps = 43/541 (7%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY----EICKA---------- 144
           ++V +LV   R ++AL +   L++      +     L+  Y    E+ KA          
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 145 ----TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
               T   +  L+R CT+ G  E AY++ ++++  G   S + +N  +  L  LN+  + 
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL--LND--KL 367

Query: 201 WK----LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           WK    L+KEM   G + +  T+N++I+ LC+  K+ EAL+L+ +M ++G+ P +V ++ 
Sbjct: 368 WKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           ++   C  G ++ A+KL+ +   M G    PN VT+  ++ G       + A  +   M 
Sbjct: 427 LLLCYCVNGCMDEAVKLYTE---MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCD--EMVKR----GLMPNNVVYNSTIHWLF 370
           + G+ CN  TY TLI+G    G      R+C+  EM+KR    G +P  + YNS I+   
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVG------RVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A  V   M  K I P+  TY+    G C+  C   A K+ N V  + +  D  
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN LI   C+  N++ A Q+L  M+  GL+P+I  Y + I GY     +E A+++YE M
Sbjct: 598 AYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKM 657

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKI 549
            K     +   Y ++I+G  KD ++  A  L       G + D IT+  L +G   NG I
Sbjct: 658 IKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDI 717

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +A  +  EM  + I  N + YN+LIN   + G  Q+A  L   M+   I+PD  TY  L
Sbjct: 718 DDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL 777

Query: 610 V 610
           V
Sbjct: 778 V 778



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 250/534 (46%), Gaps = 40/534 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+++V    + G  E A  +  +L   G  +S+      +       E+ +   +++E 
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G V    T+ ++I    +E   E+A  L  +M   G+ P+   FNM+I         
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ LF++M     DS +P++ T+N +I+  C+  ++  A  +   M + G+   + TY
Sbjct: 369 KDAVSLFKEMA----DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L+  Y   G  +EA++L  EM  +G  PN V Y + +     +   + A  +L++M  
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  + +TY+ L  GLC  G V +  ++  +   E  V  A +YN +IN   K+  + +
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M  +G+ P+I+TY + IDGYCK    + A+++  +++    +P++  YNS+I 
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIF 604

Query: 508 GLCKDASLDAAKSLLQASQRIGL------------------------------------L 531
           G C++ ++  A  +L    + GL                                    L
Sbjct: 605 GFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDL 664

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D  TY TLI+G+  +G +  A  ++SEM   G   + + +  L + LC+ G    AR+L+
Sbjct: 665 DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLL 724

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             M    I P+ + Y  L+  + +N   +E   LHD+M+   + PD+ TY+ ++
Sbjct: 725 DEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 216/441 (48%), Gaps = 5/441 (1%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM   G   +   F++V+ A  KE   ++A+ L+  M  S I P+    ++ I   C++ 
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D   AL + RK   M     +P   T N +++   K GR+E A  I+  ++  G   +V 
Sbjct: 227 DANRALLVLRK---MQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVV 283

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
              TL+ GY       +AL + +E ++ GL+P +V Y   I     EG  E A  +   M
Sbjct: 284 LATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM 343

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            D  + P    ++++ KGL  +   K A  L  + + +  + DA++YNILI++LC+   +
Sbjct: 344 RDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE-MADSGIPDAFTYNILIHWLCQRRKI 402

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   M   G+ P I+TY +L+  YC  G ++ AV++Y  M      PN+V Y ++
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           + G    A+ D A +LL   ++ G+  +  TYNTLING  + G++ E   M       G 
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
               + YN +IN   K G    A  + + M   GI P+ VTYT+ +  + K    +  ++
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           + +D+   G+ PD   YN++I
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLI 603



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 242/545 (44%), Gaps = 40/545 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +FD ++RAC + G  + A  +  ++            +  ++ L KL +  R   + ++M
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G+V    TFN V+  L K  ++EEAL +   +L +G   +VV    +++  C   ++
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +F +      D ++P  VT+  +I G  + G  E A E+   M   G+  +   +
Sbjct: 299 RKALDIFEET---LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I G       ++A+ L  EM   G+ P+   YN  IHWL     +  AL +   M +
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ---------------VLEEHMVGDA--- 429
             + P   TY  L    C NGC+ +A KL+ +               +++ H+   A   
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 430 -----------------YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
                            Y+YN LIN LC    +    ++L      G +P  +TY ++I+
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G+ K G +  A  VY+ M      PN+V Y S I+G CK +  D A  +L   +  GL  
Sbjct: 535 GFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D   YN+LI G+   G ++ A  +   M   G+  N   YN  I         ++A  L 
Sbjct: 595 DIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLY 654

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + MI  GI  D  TYTTL+  FSK+ +    ++L+ +MV  G  PD+ T+ A+   L   
Sbjct: 655 EKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRN 714

Query: 652 KSAED 656
              +D
Sbjct: 715 GDIDD 719



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 1/184 (0%)

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AI 534
           K G  + AV++++ M   E +P+  + +  I  LCK    + A  +L+  Q  G +    
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T+N++++     G++ EA  +  E+   G  ++ V    L++  C     ++A ++ +  
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  G++P  VTYT L+   ++   PE+  EL   M   G+ P    +N +I  LL +K  
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 655 EDQV 658
           +D V
Sbjct: 369 KDAV 372


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 232/447 (51%), Gaps = 20/447 (4%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           ++ +FN++I   C   KL  ALS + ++ K G  P +V FN +++  C    +  AL LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M         PN VT   ++NG C+ GRV  A  +   M++ G+  N  TY T++DG 
Sbjct: 74  HQM-------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 335 ARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
            + G +  AL L  +M +   + P+ V+Y++ I  L+ +G    A  +  +M DK I PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TYS +  G C +G   +A +L  ++L   +  D  +++ LIN L K  +L +A+ LL 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-----------KPNLVIY 502
            MI  G+ P+++T  TL+DG C  G ++ A+++++ M+K              +P++  Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +I+GL  +     A+ L +     G++ D +TY+++ING     ++ EA  MF  M +
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
              + N V +N LI   CK G      EL   M   GI+ + +TY TL+  F K  +   
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
            +++  +M+ SGV PD  T   +++ L
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 214/427 (50%), Gaps = 45/427 (10%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           I+++N  +      +++      + ++   G+   + TFN +++ LC E ++ EAL L++
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 241 -------------------------------RMLKSGIWPNVVCFNMIINEACQVGDLEF 269
                                          RM++ G+ PN + +  I++  C++GD   
Sbjct: 75  QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL L RKM  +S   + P+ V ++ II+G  K GR   A+ +   M   GI  ++ TY+ 
Sbjct: 135 ALNLLRKMEELS--HIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +I+G+   G   EA RL  EM+ R + P+ V ++  I+ L  EGD+  A  +L +MI   
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA-----------YSYNILINY 438
           +CP+  T + L  GLC +G +K A ++   + +  M  DA            +YNILI+ 
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           L        A++L   M  RG++PD +TY ++I+G CK   ++ A Q++++M      PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           +V +N++I G CK   +D    L     R G++ +AITY TLI G+   G I  +  +F 
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 558 EMRNVGI 564
           EM + G+
Sbjct: 433 EMISSGV 439



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 193/457 (42%), Gaps = 83/457 (18%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L++          A     KL   G   ++  +N  L  L   + +     L+ +M 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC 77

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 NV TF  ++  LC+E ++ EA++L  RM++ G+ PN + +  I++  C++GD  
Sbjct: 78  K----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 269 FALKLFRKM------------------GV---------------MSGDSVLPNSVTHNCI 295
            AL L RKM                  G+               M    + P+ VT++C+
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 296 INGFC-----------------------------------KLGRVEFAEEIRYAMIKAGI 320
           INGFC                                   K G +  A+++   MI +G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVK-----------RGLMPNNVVYNSTIHWL 369
             NV T  TL+DG    G  ++AL +   M K            G+ P+   YN  I  L
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             EG    A  +  +M  + I PD  TYS +  GLC+   + +A ++ + +  +    + 
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++N LI   CK+  +    +L   M  RG++ + ITY TLI G+ K GNI G++ +++ 
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQE 433

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           M      P+ +   +++ GL     L  A ++L+  Q
Sbjct: 434 MISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 168/349 (48%), Gaps = 21/349 (6%)

Query: 316 IKAG--IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
           IK G  I C++ ++  LI  +        AL    ++ K G  P  V +N+ +H L  E 
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            V  AL    D+  +   P+  T++ L  GLCR G V +A  L ++++E+ +  +  +Y 
Sbjct: 65  RVSEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 434 ILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            +++ +CK  +  +A  LL  M  +  + PD++ Y  +IDG  K G    A  ++  M+ 
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS--QRIGLLDAITYNTLINGYFINGKIA 550
               P++V Y+ +ING C       A+ LLQ    ++I   D +T++ LIN     G + 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP-DVVTFSGLINALVKEGDLN 239

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-----------ILHGI 599
            A  +  EM + G+  N V  N L++ LC  G  + A E+ K M             +G+
Sbjct: 240 SAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV 299

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            PD  TY  L++         E  EL+++M   G+ PD  TY+++I+ L
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGL 348



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 195/429 (45%), Gaps = 31/429 (7%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F  +L +   ++H L    R  +AL L   +   N V+    + GL     + +A  A+ 
Sbjct: 46  FHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAV-ALL 104

Query: 150 DALVRACTQ---------------IGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVK 193
           D +V    Q               +G T  A ++++K++   H    +  ++  +  L K
Sbjct: 105 DRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWK 164

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
                    L+ EM   G   ++ T++ +I   C   K  EA  L   ML   I P+VV 
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F+ +IN   + GDL  A  L ++M + SG  V PN VT N +++G C  G+++ A E+  
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEM-ISSG--VCPNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 314 AMIKA-----------GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           AM K+           G++ +V+TY  LI G    G   EA  L +EM  RG++P+ V Y
Sbjct: 282 AMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           +S I+ L  +  ++ A  +   M  K   P+  T++ L  G C+ G V    +L  ++  
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +V +A +Y  LI    K  N+  +  +   MI  G+ PD IT   ++ G      ++ 
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKR 461

Query: 483 AVQVYENMK 491
           A+ + E ++
Sbjct: 462 ALAMLEELQ 470



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 141/268 (52%), Gaps = 10/268 (3%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHN--QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
           D ++++IL K  C   C K  F L    ++ +        ++N L++ LC  + ++ A  
Sbjct: 14  DIYSFNILIKCFC--SCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M      P+++T+ TL++G C+ G +  AV + + M +   +PN + Y +I++G+C
Sbjct: 72  LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 511 KDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           K     +A +LL+  + +  +  D + Y+ +I+G + +G+  +A  +F EM++ GI  + 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V Y+ +IN  C  G + +A+ L++ M++  I PD VT++ L+    K        +L  +
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAED 656
           M+ SGV P+  T N ++  L      +D
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKD 275


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 256/520 (49%), Gaps = 39/520 (7%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           D + RAC       G + V+ +     ++  IH     L    KL+E   FW   +E   
Sbjct: 238 DDVERAC-------GVFCVMPRRNAVSYTNLIHG----LCEAGKLHEALEFWARMRED-- 284

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G    V T+ +++ ALC+  +  EALSL+  M + G  PNV  + ++I+  C+ G ++ 
Sbjct: 285 -GCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDE 343

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           ALK+  +M V  G  V P+ V  N +I  +CK G +E A  +   M    +  NVRTY  
Sbjct: 344 ALKMLNEM-VEKG--VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNE 400

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI G+ RG S + A+ L ++MV+  L P+ V YN+ IH L   G V+ A  +   MI   
Sbjct: 401 LICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             PD +T++     LCR G V +A ++   + E+H+  + ++Y  LI+  CK+  +  A 
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAA 520

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            L   M+    +P+ IT+  +IDG  K G ++ A+ + E+M K + KP L  YN ++  +
Sbjct: 521 SLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV 580

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            K+   D A  +L      G   + +TY   I  Y   G++ EA  M  +++N G+ ++ 
Sbjct: 581 LKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDS 640

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD- 627
             YN+LIN     G    A  +++ M   G  P Y+TY+ L+           VIE H  
Sbjct: 641 FIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL--------VIEKHKK 692

Query: 628 --------DMVLSGVSPDN-QTYNAI---ISPLLGEKSAE 655
                   D+ L+ +S DN   ++ I   I+ +L EK AE
Sbjct: 693 EGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAE 732



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/619 (26%), Positives = 284/619 (45%), Gaps = 38/619 (6%)

Query: 44  RQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHL 103
           R RK   L+ + PSLT SL+  + +     P  AL F+ W+  ++ F HSL +  +++ L
Sbjct: 37  RWRKDPSLKTLIPSLTPSLLCSLFN-LNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLL 95

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           LV  R    A                   E + +S      +P     L+    ++    
Sbjct: 96  LVRHRTLRAA-------------------ENVRNSMIKSCTSPHDATFLLNLLRRMNTAA 136

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS---CGYVENVNTFN 220
            A D   +L  K   +S+ ++N  L  L + + +     LYKEM++        N+ T N
Sbjct: 137 AAADHQHQLAFK---LSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLN 193

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            ++ + CK   +  A   + R+L+    P++  +  ++   C+  D+E A  +F      
Sbjct: 194 TMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVF------ 247

Query: 281 SGDSVLP--NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
               V+P  N+V++  +I+G C+ G++  A E    M + G    VRTY  L+      G
Sbjct: 248 ---CVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESG 304

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              EAL L  EM +RG  PN   Y   I +L  EG ++ AL +L++M++K + P    ++
Sbjct: 305 RELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFN 364

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L    C+ G ++ A  +   +  + +  +  +YN LI   C+  ++  A  LL+ M+  
Sbjct: 365 ALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVES 424

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            L PD++TY TLI G C+ G ++ A +++  M +    P+   +N+ +  LC+   +  A
Sbjct: 425 KLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484

Query: 519 KSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +L++  ++    +   Y  LI+GY   GKI  A ++F  M       N + +N++I+ 
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDG 544

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L K G  Q A  L++ M    + P   TY  LV    K    +   E+ + ++ SG  P+
Sbjct: 545 LRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPN 604

Query: 638 NQTYNAIISPLLGEKSAED 656
             TY A I     +   E+
Sbjct: 605 VVTYTAFIKAYCSQGRLEE 623



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 131/572 (22%), Positives = 249/572 (43%), Gaps = 68/572 (11%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   +  LV A  + G    A  +  +++ +G   +++ +   + +L K   +    
Sbjct: 286 CFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEAL 345

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEE--------------------------- 234
           K+  EMV  G   +V  FN +I + CK   +E+                           
Sbjct: 346 KMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405

Query: 235 --------ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
                   A++L  +M++S + P+VV +N +I+  C+VG ++ A +LFR   +M  D   
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFR---LMIRDGFS 462

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+  T N  +   C++GRV  A +I  ++ +  +  N   Y  LIDGY + G  E A  L
Sbjct: 463 PDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASL 522

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M+    +PN++ +N  I  L  EG V+ A+ ++ DM    + P   TY+IL + + +
Sbjct: 523 FKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLK 582

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
                +A ++ N+++      +  +Y   I   C    L  A++++  +   G++ D   
Sbjct: 583 EYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFI 642

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC-----KDAS----LDA 517
           Y  LI+ Y   G ++ A  V   M     +P+ + Y+ ++  L      K+ S    LD 
Sbjct: 643 YNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDV 702

Query: 518 AKS--------------------LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           + +                    L +     G +  + TY+ LING    G++  AF+++
Sbjct: 703 SLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLY 762

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             MR  GI+ +++ +N L++  CK G + +A  L+  M+    +    +Y  L+    + 
Sbjct: 763 HHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQ 822

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            + E+   +   ++  G + D   +  +I  L
Sbjct: 823 MNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGL 854



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 219/494 (44%), Gaps = 30/494 (6%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
            LL+     K +P V  ++ L+    ++G  + A  + + +   G S     +N F+  L
Sbjct: 416 ALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCL 475

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            ++  +G   ++ + +       N + +  +I   CK  K+E A SL+ RML     PN 
Sbjct: 476 CRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNS 535

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + FN++I+   + G ++ A+ L   M       V P   T+N ++    K    + A EI
Sbjct: 536 ITFNVMIDGLRKEGKVQDAMLLVEDMAKFD---VKPTLHTYNILVEEVLKEYDFDRANEI 592

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              +I +G   NV TY   I  Y   G  EEA  +  ++   G++ ++ +YN  I+    
Sbjct: 593 LNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGC 652

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM------ 425
            G ++ A  VL  M      P + TYSIL K L               V+E+H       
Sbjct: 653 MGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL---------------VIEKHKKEGSNP 697

Query: 426 VG-DAYSYNILINY--LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           VG D    NI ++   +    +      L   M   G +P++ TY  LI+G CK G +  
Sbjct: 698 VGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNV 757

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLIN 541
           A  +Y +M++    P+ +I+NS+++  CK      A +LL +      L  + +Y  LI 
Sbjct: 758 AFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLIC 817

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G F      +A A+F  +   G   ++V + +LI+ L K G   Q  EL+ +M  +G   
Sbjct: 818 GLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRL 877

Query: 602 DYVTYTTLVTRFSK 615
              TY+ L+   ++
Sbjct: 878 HPETYSMLMQELNR 891



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 6/231 (2%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIV---RGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           SYN L+  L + + +     L   M+      + P++IT  T+++ YCK GN+  A   +
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFING 547
             + + E  P+L  Y S++ G C++  ++ A  +     R    +A++Y  LI+G    G
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPR---RNAVSYTNLIHGLCEAG 269

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           K+ EA   ++ MR  G       Y +L+  LC+ G   +A  L   M   G  P+  TYT
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            L+    K    +E +++ ++MV  GV+P    +NA+I         ED V
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAV 380


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 232/447 (51%), Gaps = 20/447 (4%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           ++ +FN++I   C   KL  ALS + ++ K G  P +V FN +++  C    +  AL LF
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M         PN VT   ++NG C+ GRV  A  +   M++ G+  N  TY T++DG 
Sbjct: 74  HQM-------CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 335 ARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
            + G +  AL L  +M +   + P+ V+Y++ I  L+ +G    A  +  +M DK I PD
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TYS +  G C +G   +A +L  ++L   +  D  +++ LIN L K  +L +A+ LL 
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-----------KPNLVIY 502
            MI  G+ P+++T  TL+DG C  G ++ A+++++ M+K              +P++  Y
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +I+GL  +     A+ L +     G++ D +TY+++ING     ++ EA  MF  M +
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
              + N V +N LI   CK G      EL   M   GI+ + +TY TL+  F K  +   
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNING 426

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
            +++  +M+ SGV PD  T   +++ L
Sbjct: 427 SLDIFQEMISSGVYPDTITIRNMLTGL 453



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 214/427 (50%), Gaps = 45/427 (10%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           I+++N  +      +++      + ++   G+   + TFN +++ LC E ++ EAL L++
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 241 -------------------------------RMLKSGIWPNVVCFNMIINEACQVGDLEF 269
                                          RM++ G+ PN + +  I++  C++GD   
Sbjct: 75  QMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL L RKM  +S   + P+ V ++ II+G  K GR   A+ +   M   GI  ++ TY+ 
Sbjct: 135 ALNLLRKMEELS--HIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +I+G+   G   EA RL  EM+ R + P+ V ++  I+ L  EGD+  A  +L +MI   
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA-----------YSYNILINY 438
           +CP+  T + L  GLC +G +K A ++   + +  M  DA            +YNILI+ 
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           L        A++L   M  RG++PD +TY ++I+G CK   ++ A Q++++M      PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           +V +N++I G CK   +D    L     R G++ +AITY TLI G+   G I  +  +F 
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 558 EMRNVGI 564
           EM + G+
Sbjct: 433 EMISSGV 439



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 193/457 (42%), Gaps = 83/457 (18%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L++          A     KL   G   ++  +N  L  L   + +     L+ +M 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC 77

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 NV TF  ++  LC+E ++ EA++L  RM++ G+ PN + +  I++  C++GD  
Sbjct: 78  K----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 269 FALKLFRKM------------------GV---------------MSGDSVLPNSVTHNCI 295
            AL L RKM                  G+               M    + P+ VT++C+
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 296 INGFC-----------------------------------KLGRVEFAEEIRYAMIKAGI 320
           INGFC                                   K G +  A+++   MI +G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVK-----------RGLMPNNVVYNSTIHWL 369
             NV T  TL+DG    G  ++AL +   M K            G+ P+   YN  I  L
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             EG    A  +  +M  + I PD  TYS +  GLC+   + +A ++ + +  +    + 
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++N LI   CK+  +    +L   M  RG++ + ITY TLI G+ K GNI G++ +++ 
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQE 433

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           M      P+ +   +++ GL     L  A ++L+  Q
Sbjct: 434 MISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 168/349 (48%), Gaps = 21/349 (6%)

Query: 316 IKAG--IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
           IK G  I C++ ++  LI  +        AL    ++ K G  P  V +N+ +H L  E 
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            V  AL    D+  +   P+  T++ L  GLCR G V +A  L ++++E+ +  +  +Y 
Sbjct: 65  RVSEAL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 434 ILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            +++ +CK  +  +A  LL  M  +  + PD++ Y  +IDG  K G    A  ++  M+ 
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS--QRIGLLDAITYNTLINGYFINGKIA 550
               P++V Y+ +ING C       A+ LLQ    ++I   D +T++ LIN     G + 
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP-DVVTFSGLINALVKEGDLN 239

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-----------ILHGI 599
            A  +  EM + G+  N V  N L++ LC  G  + A E+ K M             +G+
Sbjct: 240 SAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGV 299

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            PD  TY  L++         E  EL+++M   G+ PD  TY+++I+ L
Sbjct: 300 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGL 348



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 195/429 (45%), Gaps = 31/429 (7%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F  +L +   ++H L    R  +AL L   +   N V+    + GL     + +A  A+ 
Sbjct: 46  FHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAV-ALL 104

Query: 150 DALVRACTQ---------------IGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVK 193
           D +V    Q               +G T  A ++++K++   H    +  ++  +  L K
Sbjct: 105 DRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWK 164

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
                    L+ EM   G   ++ T++ +I   C   K  EA  L   ML   I P+VV 
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F+ +IN   + GDL  A  L ++M + SG  V PN VT N +++G C  G+++ A E+  
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEM-ISSG--VCPNVVTCNTLLDGLCDSGKLKDALEMFK 281

Query: 314 AMIKA-----------GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           AM K+           G++ +V+TY  LI G    G   EA  L +EM  RG++P+ V Y
Sbjct: 282 AMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTY 341

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           +S I+ L  +  ++ A  +   M  K   P+  T++ L  G C+ G V    +L  ++  
Sbjct: 342 SSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGR 401

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +V +A +Y  LI    K  N+  +  +   MI  G+ PD IT   ++ G      ++ 
Sbjct: 402 RGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKK 461

Query: 483 AVQVYENMK 491
           A+ + E ++
Sbjct: 462 ALAMLEELQ 470



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 141/268 (52%), Gaps = 10/268 (3%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHN--QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
           D ++++IL K  C   C K  F L    ++ +        ++N L++ LC  + ++ A  
Sbjct: 14  DIYSFNILIKCFCS--CSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M      P+++T+ TL++G C+ G +  AV + + M +   +PN + Y +I++G+C
Sbjct: 72  LFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 511 KDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           K     +A +LL+  + +  +  D + Y+ +I+G + +G+  +A  +F EM++ GI  + 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V Y+ +IN  C  G + +A+ L++ M++  I PD VT++ L+    K        +L  +
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAED 656
           M+ SGV P+  T N ++  L      +D
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKD 275


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 240/485 (49%), Gaps = 7/485 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V+ K+   G+   I   ++ L+       I     L  +MV  GY  +  TF  +I+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            L    K  EA++L  +M++ G  P++V +  ++N  C+ GD++ AL L  KM       
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM---EAAR 253

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +  N V  N II+  CK   VE A ++   M   GI  NV TY +LI+     G   +A 
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           RL   M+++ + PN V +N+ I   F EG +  A  +  +MI + I PD  TY++L  G 
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C +  + +A ++   ++ +  + +  +YN LIN  CK   +    +L   M  RGL+ + 
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY T+I G+ + G+ + A  V++ M       +++ Y+ +++GLC    LD A  + + 
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            Q+  + L+   YNT+I G    GK+ EA+ +F  +    I  + V YN +I+ LC    
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            Q+A +L + M   G +P+  TY TL+    ++C      EL  +M  SG   D  T + 
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610

Query: 644 IISPL 648
           + + L
Sbjct: 611 VTNML 615



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 246/500 (49%), Gaps = 38/500 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+N+      L ++M + G   ++ T+++ I   C+  +L  AL++ 
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM------------------- 280
            +M+K G  P++V  + ++N  C    +  A+ L  +M  M                   
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 281 --SGDSVL-----------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             + ++V            P+ VT+  ++NG CK G ++ A  +   M  A I  NV  +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID   +    E A+ L  EM  +G+ PN V YNS I+ L   G    A  +LS+M++
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I P+  T++ L     + G + +A KLH ++++  +  D  +YN+LIN  C  N L  
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AKQ+   M+ +  +P+I TY TLI+G+CK   +E  V+++  M +     N V Y +II 
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441

Query: 508 GLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           G  +    D+A+ + +   S R+   D +TY+ L++G    GK+  A  +F  ++   + 
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVP-TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           +N   YN +I  +CK G   +A +L   +    I PD VTY T+++        +E  +L
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDL 557

Query: 626 HDDMVLSGVSPDNQTYNAII 645
              M   G  P++ TYN +I
Sbjct: 558 FRKMKEDGTLPNSGTYNTLI 577



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 216/419 (51%), Gaps = 4/419 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K+++A+ L+  M+KS  +P++V FN +++   ++   E  + L  +M  +    +  +  
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG---ISHDLY 119

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T++  IN FC+  ++  A  +   M+K G + ++ T ++L++GY       +A+ L D+M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ G  P+   + + IH LF       A+ ++  M+ +   PD  TY  +  GLC+ G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A  L N++    +  +   +N +I+ LCK  ++  A  L + M  +G+ P+++TY +L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIG 529
           I+  C  G    A ++  NM + +  PN+V +N++I+   K+  L  A+ L +   QR  
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D ITYN LING+ ++ ++ EA  MF  M +     N   YN LIN  CK    +   E
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L + M   G++ + VTYTT++  F +    +    +   MV + V  D  TY+ ++  L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 204/412 (49%), Gaps = 6/412 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A +++ K++      ++  +N  +  L K   +    
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM + G   NV T+N +I  LC   +  +A  L   ML+  I PNVV FN +I+  
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL  +M   S D   P+++T+N +INGFC   R++ A+++   M+     
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSID---PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N++TY TLI+G+ +    E+ + L  EM +RGL+ N V Y + I   F  GD + A  V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   +  D  TYSIL  GLC  G +  A  +   + +  M  + + YN +I  +CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +  A  L  S+ ++   PD++TY T+I G C    ++ A  ++  MK+    PN   
Sbjct: 516 AGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +  G +   +  +L+     +G++ ++F
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSF 624



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 237/500 (47%), Gaps = 39/500 (7%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           N LS ++K+++      L+ +MV      ++  FN ++ A+ K  K E  +SL  +M   
Sbjct: 56  NRLSDIIKVDDA---VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           GI  ++  +++ IN  C+   L  AL +  KM  +  +   P+ VT + ++NG+C   R+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE---PDIVTLSSLLNGYCHSKRI 169

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +   M++ G   +  T+ TLI G      + EA+ L D+MV+RG  P+ V Y + 
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++ L   GD++ AL +L+ M    I  +   ++ +   LC+   V+ A  L  ++  + +
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             +  +YN LIN LC     + A +LLS+M+ + + P+++T+  LID + K G +  A +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYF 544
           ++E M +    P+ + YN +ING C    LD AK + +       L  I TYNTLING+ 
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
              ++ +   +F EM   G+  N V Y  +I    + G    A+ + K M+ + +  D +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469

Query: 605 TYTTLV--------------------------------TRFSKNCSPEEVIELHDDMVLS 632
           TY+ L+                                T     C   +V E  D     
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529

Query: 633 GVSPDNQTYNAIISPLLGEK 652
            + PD  TYN +IS L  ++
Sbjct: 530 SIKPDVVTYNTMISGLCSKR 549



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 1/363 (0%)

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           N    + +V+ A ++   M+K+    ++  +  L+   A+    E  + L ++M   G+ 
Sbjct: 56  NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            +   Y+  I+       +  AL VL+ M+     PD  T S L  G C +  +  A  L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +Q++E     D +++  LI+ L   N  + A  L+  M+ RG  PD++TYGT+++G CK
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
            G+I+ A+ +   M+    K N+VI+N+II+ LCK   ++ A  L    +  G+  + +T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           YN+LIN     G+ ++A  + S M    I  N V +N LI+   K G   +A +L + MI
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
              I PD +TY  L+  F  +   +E  ++   MV     P+ QTYN +I+     K  E
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415

Query: 656 DQV 658
           D V
Sbjct: 416 DGV 418


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 244/476 (51%), Gaps = 6/476 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + TP +  F+ ++ +  ++     A  +  +L++KG    +   N  ++    + +I   
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +  +++  GY  +  T N +I  LC + ++++AL  + ++L  G   N V +  +IN 
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLING 173

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++GD   A+KL +K+    G    PN V ++ II+  CK   V  A  +   M   GI
Sbjct: 174 VCKIGDTRAAIKLLQKI---DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 230

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY+TLI G+   G  +EA+ L +EMV + + PN   YN  +  L  EG V+ A  
Sbjct: 231 SADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL+ M+   + PD  TYS L  G      VK+A  + N +    +  D ++Y ILIN  C
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  L   M  + ++P I+TY +LIDG CK G I     + + M    +  N++
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVI 410

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y+S+I+GLCK+  LD A +L    +  G+  +  T+  L++G    G++ +A  +F ++
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
              G  +N   YN++I+  CK G  ++A  ++  M  +G IPD VT+  ++    K
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 229/444 (51%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M+   +   +  FN ++ +  K      A+SL +R+   GI P+++  N++IN  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G + F   +  K+ +  G    P++VT N +I G C  G+V+ A      ++  G   N
Sbjct: 107 MGQITFGFSVLAKI-LKRG--YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y TLI+G  + G +  A++L  ++  R   PN V+Y++ I  L     V  A  + S
Sbjct: 164 QVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFS 223

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K I  D  TYS L  G C  G +K+A  L N+++ + +  + Y+YNIL++ LCK  
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  AK +L+ M+   + PD+ITY TL+DGY     ++ A  V+  M  +   P++  Y 
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +ING CK+  +D A +L +   +  ++  I TY++LI+G   +G+I   + +  EM + 
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDR 403

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   N + Y+ LI+ LCK G   +A  L   M   GI P+  T+T L+    K    ++ 
Sbjct: 404 GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 463

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            E+  D++  G   +  TYN +I 
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMID 487



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 141/270 (52%), Gaps = 1/270 (0%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD  T +IL    C  G +   F +  ++L+     D  + N LI  LC    +  
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A      ++ +G   + ++YGTLI+G CK G+   A+++ + +     KPN+V+Y++II+
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIID 207

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LCK   +  A  L       G+  D +TY+TLI G+ I GK+ EA  + +EM    I  
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YNIL++ LCK G  ++A+ ++ VM+   + PD +TY+TL+  +      ++   + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + M L GV+PD  TY  +I+     K  ++
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDE 357



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 172/388 (44%), Gaps = 77/388 (19%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
            + K    ++  ++ A  +      AY +  ++ VKG S  +  ++  +       ++  
Sbjct: 193 RLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKE 252

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-------------- 245
              L  EMV      NV T+N+++ ALCKE K++EA S+   MLK+              
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD 312

Query: 246 ---------------------GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
                                G+ P+V  + ++IN  C+   ++ AL LF++M      +
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM---HQKN 369

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++P  VT++ +I+G CK GR+ +  ++   M   G   NV TY++LIDG  + G  + A+
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAI 429

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L ++M  +G+ PN                                    FT++IL  GL
Sbjct: 430 ALFNKMKDQGIRPNT-----------------------------------FTFTILLDGL 454

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G +K A ++   +L +    + Y+YN++I+  CK   L  A  +LS M   G IPD 
Sbjct: 455 CKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDA 514

Query: 465 ITYGTLIDGYCK----GGNIEGAVQVYE 488
           +T+  +I    K    GGN+    +V+E
Sbjct: 515 VTFEIIIIALFKKDENGGNVGFDKKVWE 542



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 122/250 (48%), Gaps = 2/250 (0%)

Query: 284  SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
             + P+  T N +IN FC +G++ F   I   ++K G   +  T+ TLI+G    G   +A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 344  LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            L   D+++ +G   N V Y + I+ +   GD   A+ +L  +  +   PD   Y+ +   
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 404  LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            LC++  V +A+ L  ++  + +  D  +YN LI   C    L  A  LL+ M+++ + P+
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 464  IITYGTLIDGYCKGGN--IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
            + TY  L+D  CK G   ++ ++ +   M+    K N V +  II+ L +    D  + L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 522  LQASQRIGLL 531
            L      GLL
Sbjct: 1196 LHEMIARGLL 1205



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 36/297 (12%)

Query: 165  AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            A  +  +L++KG    +   N  ++    + +I   + +  +++  GY  +  TF  +I 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 225  ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             LC + ++ +AL  + ++L  G   N V +  +IN  C++GD   A+KL RK   + G  
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRK---IDGRL 1061

Query: 285  VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
              P+ V +N II+  CK   V  A  + + M   GI  +V TY TLI G+   G  +EA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 345  RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
             L ++MV + + PN   YN  +  L  EG          D++D+       + S+L+K +
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEG---------KDLLDE-------SLSMLSK-M 1164

Query: 405  CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
              NGC                  +A ++ I+I+ L + +     ++LL  MI RGL+
Sbjct: 1165 EDNGC----------------KANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 11/265 (4%)

Query: 343  ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
            A+ L   +  +G+ P+    N  I+     G +     +L+ ++ +   PD  T++ L  
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 403  GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
            GLC  G V +A   H+++L +    +  SY  LIN +CK  +  AA +LL  +  R   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 463  DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            D++ Y T+ID  CK   +  A  ++  M       ++V YN++I G C    L  A  LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 523  QASQRIGLLDAI-----TYNTLINGYFINGK--IAEAFAMFSEMRNVGIAVNKVGYNILI 575
                   +L  I     TYN L++     GK  + E+ +M S+M + G   N V + I+I
Sbjct: 1125 NKM----VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180

Query: 576  NFLCKFGCYQQARELMKVMILHGII 600
            + L +     +  +L+  MI  G++
Sbjct: 1181 SALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 9/231 (3%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            +N +++   K  + + A  L   + ++G+ PD+IT   LI+ +C  G I     V   +
Sbjct: 61  QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAA-----KSLLQASQRIGLLDAITYNTLINGYFI 545
            K    P+ V  N++I GLC    +  A     K L Q  Q    L+ ++Y TLING   
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ----LNQVSYGTLINGVCK 176

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G    A  +  ++       N V Y+ +I+ LCK+    +A  L   M + GI  D VT
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           Y+TL+  F      +E I L ++MVL  ++P+  TYN ++  L  E   ++
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 9/211 (4%)

Query: 446  AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
            + A  L   + ++G+ PD+ T   LI+ +C  G I     +   + K    P+ + + ++
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002

Query: 506  INGLCKDASLDAA-----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            INGLC    ++ A     K L Q  Q    L+ ++Y TLING    G    A  +  ++ 
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQ----LNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 561  NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
                  + V YN +I+ LCK     +A  L   M + GI  D VTY TL+  F      +
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 621  EVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            E I L + MVL  ++P+ +TYN ++  L  E
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKE 1149



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 1/203 (0%)

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N+  A    + M+     P II +  ++D + K  +   AV +   ++    +P+L+  N
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +IN  C    +    S+L    + G   D +T NTLI G  + G++ +A     ++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G  +N+V Y  LIN +CK G  + A +L++ +      P+ V Y+T++    K     E 
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
             L  +M + G+S D  TY+ +I
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLI 241



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 118/253 (46%), Gaps = 7/253 (2%)

Query: 140  EICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
            E+    P +F  + L+     +G     + ++ K+  +G+      +   ++ L    ++
Sbjct: 953  ELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQV 1012

Query: 198  GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
             +    + ++++ G+  N  ++  +I  +CK      A+ L  ++      P+VV +N I
Sbjct: 1013 NKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072

Query: 258  INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
            I+  C+   +  A  LF +M V     +  + VT+N +I GFC +G+++ A  +   M+ 
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNV---KGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129

Query: 318  AGIDCNVRTYATLIDGYARGGSS--EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
              I+ NVRTY  L+D   + G    +E+L +  +M   G   N V +   I  LF + + 
Sbjct: 1130 KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEN 1189

Query: 376  EGALFVLSDMIDK 388
            +    +L +MI +
Sbjct: 1190 DKVEKLLHEMIAR 1202



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 5/174 (2%)

Query: 149  FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            +  L+    +IG T  A  +++K+  +     +  +N  +  L K   + + + L+ EM 
Sbjct: 1034 YGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMN 1093

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD-- 266
              G   +V T+N +IY  C   KL+EA+ L  +M+   I PNV  +N++++  C+ G   
Sbjct: 1094 VKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDL 1153

Query: 267  LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            L+ +L +  K   M  +    N+VT   II+   +    +  E++ + MI  G+
Sbjct: 1154 LDESLSMLSK---MEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 240/476 (50%), Gaps = 9/476 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G S ++   N+ L  LV+   +      ++  +S     NV++FN+++         E  
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVV 147

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
            +L   M   GI  N     +I++  C   DL+ A+  F  +   S +   P   T+  +
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSV---SPNKCEPTLFTYTVL 204

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++G CK  +VE A ++   MI+ G   ++  Y++LIDG ++ G  +EA +L D MV RG 
Sbjct: 205 VDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGP 264

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P  V Y S +  L   G ++ A+  + +M  + + P   TYS +  G    G V++AF 
Sbjct: 265 PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFA 324

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +  ++ +     D  SY + I  L        A+++  +M+ +G  PD+ TYG +ID +C
Sbjct: 325 VMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 384

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-I 534
           K G++  A  V   M K   KPN  IY  I++G  K + L+ A  L Q   + G+L + +
Sbjct: 385 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV 444

Query: 535 TYNTLINGYFINGKIAEAFAMFSEM--RNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           TYNT+IN      K+ EA  +  EM  R   +  + V Y+++I+ L K G  ++A +L+ 
Sbjct: 445 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLA 504

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            MI +G+IPD  TYT+L+   +        +EL ++M+ +G+ PD+ TY  ++  L
Sbjct: 505 EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 560



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 249/543 (45%), Gaps = 33/543 (6%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE-FLEGL 135
           AL FY W      FSH+L +  +++  LV      DAL    + +S  +VS     L G 
Sbjct: 79  ALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNILLRGF 138

Query: 136 L--DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
              D +E+  A   + +   R  T  GAT G                       LS L  
Sbjct: 139 AARDDFEVVNAL--LREMKSRGITSNGATHGV---------------------ILSALCA 175

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
             ++ +    +  +        + T+ +++  LCK  K+E A  ++  M++ G  P+++ 
Sbjct: 176 RRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIA 235

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           ++ +I+   + G ++ A KL   + +M      P +V +  I+ G CK GR++ A +   
Sbjct: 236 YSSLIDGLSKAGRVDEARKL---VDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 292

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M +  +   V TY+ ++ GY   G  E+A  + +EM  R   P+ + Y   I  L++ G
Sbjct: 293 EMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIG 352

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             E A  V   M++K   PD  TY I+    C+ G +  A  +   + +  +  + Y Y 
Sbjct: 353 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 412

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM--K 491
           ++++   KS+ L  A +L   ++  G++P  +TY T+I+  CK   ++ A+++   M  +
Sbjct: 413 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 472

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           K E +P++V Y+ II+GL K    + A  LL      G++ D  TY +LI      GK++
Sbjct: 473 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVS 532

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A  +  EM   GI  +   Y  L+  LC+      A +L++ M+ +G  P+  T+  + 
Sbjct: 533 RAMELLEEMLKAGIFPDDHTYGTLVQILCRSDV-DAAWDLLQEMMRNGHTPNEFTFKAVE 591

Query: 611 TRF 613
             F
Sbjct: 592 KGF 594


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 239/447 (53%), Gaps = 4/447 (0%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           + Q++++ G   +    N  ++    L +I   + ++ +++  GY  ++ T+  +I  LC
Sbjct: 71  LFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLC 130

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
              +++E+L+ + R++  GI  + V +  +IN  C++G    AL+L RK+    G+   P
Sbjct: 131 LNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI---EGEICRP 187

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           + V +N II+G CK   V  A ++   M +  +  NV TY +LI G+   G  ++A  L 
Sbjct: 188 DVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLL 247

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EMV + + PN   +N+ +  L  EG +  A  +++ M+ + + PD FTY+ L  G    
Sbjct: 248 NEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLV 307

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
               +A  + N + +  +  D +SY+++I+ L K   L  A  L   M    +IPD++ Y
Sbjct: 308 KEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAY 367

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            +LIDG CK G I  A++  + M    + PN++ Y S+I+ LCK   +D A +LL+  + 
Sbjct: 368 SSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKD 427

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  +  TYN L++G   +G++ +A  +F ++   G  V+ V Y+I+IN LCK   + +
Sbjct: 428 QGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDE 487

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRF 613
           A  L+  M   G +PD + Y T++  F
Sbjct: 488 ALTLLSKMEDKGCVPDAIAYETIINAF 514



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 237/471 (50%), Gaps = 5/471 (1%)

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L  LVK         L++ M   G   N  T N++I + C   ++  A S++ ++LK G 
Sbjct: 56  LGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGY 115

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+++ +  +I   C  G ++ +L    ++       +  + V++  +ING CK+G+   
Sbjct: 116 QPDIITYTTLIRGLCLNGQVKESLNFHDRL---VSQGIKLDHVSYGTLINGLCKIGQTGP 172

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   +       +V  Y T+IDG  +     +A  L  EM ++ + PN V Y S I+
Sbjct: 173 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIY 232

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G ++ A  +L++M+ K++ P+  T++ L  GLC+ G +++A  L   +++E +  
Sbjct: 233 GFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 292

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D ++YN L++          AK + + M   G+  D+ +Y  +I G  K   ++ A+ ++
Sbjct: 293 DVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLF 352

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAA-KSLLQASQRIGLLDAITYNTLINGYFIN 546
           E M+     P++V Y+S+I+GLCK   +++A K + +   R    + ITY +LI+    +
Sbjct: 353 EGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKS 412

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            ++ +A A+  ++++ GI  N   YNIL++ LCK G    A+++ + +++ G   D VTY
Sbjct: 413 HQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTY 472

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           + ++    K    +E + L   M   G  PD   Y  II+    EK   D+
Sbjct: 473 SIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFF-EKDMNDK 522



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 215/429 (50%), Gaps = 10/429 (2%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L +A+  + RML+    P ++ F  I+    +       + LF++M +     +  N +T
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMEL---HGIQSNYIT 86

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN +C L ++  A  +   ++K G   ++ TY TLI G    G  +E+L   D +V
Sbjct: 87  LNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLV 146

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCV 410
            +G+  ++V Y + I+ L   G    AL +L   I+  IC PD   Y+ +  GLC++  V
Sbjct: 147 SQGIKLDHVSYGTLINGLCKIGQTGPALRLLRK-IEGEICRPDVVMYNTIIDGLCKDKLV 205

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           + AF L+ ++ E+ +  +  +Y  LI   C    L  A  LL+ M+++ + P++ T+ TL
Sbjct: 206 RDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTL 265

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING--LCKDASLDAAKSLLQASQRI 528
           +DG CK G +  A  +   M K    P++  YN++++G  L K+A    AK++     ++
Sbjct: 266 VDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAG--KAKNVFNIMAQM 323

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  D  +Y+ +I+G      + EA  +F  MRN  +  + V Y+ LI+ LCK G    A
Sbjct: 324 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 383

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            + +  M   G  P+ +TYT+L+    K+   ++ I L   +   G+  +  TYN ++  
Sbjct: 384 LKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDG 443

Query: 648 LLGEKSAED 656
           L  +    D
Sbjct: 444 LCKDGRLTD 452



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 204/414 (49%), Gaps = 15/414 (3%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    +IG T  A  +++K++ +     +  +N  +  L K   +   + LY EM 
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF 216

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 NV T+  +IY  C   +L++A  L   M+   + PNV  FN +++  C+ G + 
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L   + VM  + V P+  T+N +++G+  +     A+ +   M + G+ C+V +Y+
Sbjct: 277 EAKSL---VAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYS 333

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I G ++    +EA+ L + M    ++P+ V Y+S I  L   G +  AL  + +M D+
Sbjct: 334 VMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDR 393

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P+  TY+ L   LC++  V +A  L  ++ ++ +  + Y+YNIL++ LCK   L  A
Sbjct: 394 GQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDA 453

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           +++   ++++G   D++TY  +I+G CK    + A+ +   M+     P+ + Y +IIN 
Sbjct: 454 QKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINA 513

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
             +    D A+ LL+      ++D + Y         NG   + +  F   R++
Sbjct: 514 FFEKDMNDKAEKLLRE-----MIDCVDYKD-------NGDTCDQYDEFICKRSI 555



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 171/335 (51%), Gaps = 3/335 (0%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           EIC+    +++ ++    +      A+D+  ++  K    ++  + + +     + ++ +
Sbjct: 183 EICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDK 242

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + L  EMV      NV TFN ++  LCKE K+ EA SL   M+K G+ P+V  +N +++
Sbjct: 243 AFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMD 302

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
               V +   A  +F  M  M    V  +  +++ +I+G  K+  ++ A ++   M    
Sbjct: 303 GYFLVKEAGKAKNVFNIMAQM---GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 359

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V  Y++LIDG  + G    AL+  DEM  RG  PN + Y S I  L     V+ A+
Sbjct: 360 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAI 419

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L  + D+ I  + +TY+IL  GLC++G +  A K+   +L +    D  +Y+I+IN L
Sbjct: 420 ALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGL 479

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           CK +    A  LLS M  +G +PD I Y T+I+ +
Sbjct: 480 CKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF 514



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 138/299 (46%), Gaps = 5/299 (1%)

Query: 126 VSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           V  L+   GLL+   +    P V  F+ LV    + G    A  ++  +  +G    +  
Sbjct: 237 VGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFT 296

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +     + E G+   ++  M   G   +V++++++I  L K   L+EA+ L+  M 
Sbjct: 297 YNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMR 356

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
              + P+VV ++ +I+  C+ G +  ALK   +M         PN +T+  +I+  CK  
Sbjct: 357 NENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM---HDRGQPPNVITYTSLIDALCKSH 413

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +V+ A  +   +   GI  N+ TY  L+DG  + G   +A ++  +++ +G   + V Y+
Sbjct: 414 QVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYS 473

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
             I+ L  E   + AL +LS M DK   PD   Y  +           +A KL  ++++
Sbjct: 474 IMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 231/449 (51%), Gaps = 4/449 (0%)

Query: 180  SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
            SI  +   L+ + K+N+      LY +M + G   ++ +F ++I+  C+  +L  AL+L 
Sbjct: 603  SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662

Query: 240  YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +M+K G  P++V    ++N  CQ    + A+ L   +  M G   +PN V +N +ING 
Sbjct: 663  GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL---VDSMDGFGFVPNVVIYNTVINGL 719

Query: 300  CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            CK   +  A E+ Y M K GI  +  TY TLI G +  G   +A RL  +MVKR + PN 
Sbjct: 720  CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 779

Query: 360  VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
            + + + I     EG++  A  +  +MI + + P+ FTY+ L  G C +GC+  A  + + 
Sbjct: 780  IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 839

Query: 420  VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
            ++ +    D  +YN LI   CKS  +    +L   M  +GL+ D  TY TLI GYC+ G 
Sbjct: 840  MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899

Query: 480  IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
            +  A +V+  M      P++V YN +++ LC +  ++ A  +++  Q+  + +D ITYN 
Sbjct: 900  LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959

Query: 539  LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
            +I G     K+ EA+ +F  +   G+  + + Y  +I+ LC+ G  ++A +L + M   G
Sbjct: 960  IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019

Query: 599  IIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
             +P    Y   +     + S E +   H+
Sbjct: 1020 FMPSERIYDETLRDHYTSLSAELIKAAHE 1048



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 225/435 (51%), Gaps = 10/435 (2%)

Query: 143  KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
            +  P++ D   R  T I A    +D++     K++  G S  ++++   +    + + + 
Sbjct: 599  RPIPSIVD-FTRVLTVI-AKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLS 656

Query: 199  RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
                L  +M+  G+  ++ T   ++   C+  + +EA+SL   M   G  PNVV +N +I
Sbjct: 657  LALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 716

Query: 259  NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
            N  C+  DL  AL++F     M    +  ++VT+N +I+G    GR   A  +   M+K 
Sbjct: 717  NGLCKNRDLNNALEVFY---CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 773

Query: 319  GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
             ID NV  +  LID + + G+  EA  L  EM++R ++PN   YNS I+     G +  A
Sbjct: 774  KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 833

Query: 379  LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             ++   M+ K   PD  TY+ L  G C++  V+   KL  ++  + +VGDA++YN LI+ 
Sbjct: 834  KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 893

Query: 439  LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
             C++  L  A+++ + M+  G+ PDI+TY  L+D  C  G IE A+ + E+++K E   +
Sbjct: 894  YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 953

Query: 499  LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
            ++ YN II GLC+   L  A  L ++  R G+  DAI Y T+I+G    G   EA  +  
Sbjct: 954  IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 1013

Query: 558  EMRNVGIAVNKVGYN 572
             M+  G   ++  Y+
Sbjct: 1014 RMKEDGFMPSERIYD 1028



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 222/436 (50%), Gaps = 6/436 (1%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + L+ EMV    + ++  F  ++ A     + E  +    +M   GI  ++  F ++I+ 
Sbjct: 56  FALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHC 115

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+   L FAL +  KM  +  +   P+ VT   +++GFC + R+  A  +   M+K+G 
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYE---PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + NV  Y TLIDG  + G    AL L +EM K+GL  + V YN+ +  L   G    A  
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L DM+ + I PD  T++ L     + G + +A +L+ ++++  +  +  +YN +IN LC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
               L  AK+    M  +G  P+++TY TLI G+CK   ++  +++++ M       ++ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 501 IYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
            YN++I+G C+   L  A  +     S+R+   D IT+  L++G  +NG+I  A   F +
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRV-TPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           MR     +  V YNI+I+ LCK    ++A EL   + + G+ PD  TYT ++    KN  
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 619 PEEVIELHDDMVLSGV 634
             E  EL   M   G+
Sbjct: 472 RREADELIRRMKEEGI 487



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 209/417 (50%), Gaps = 4/417 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+ A   +   E      QK+++ G S  ++++   +    + + +     +  +M+
Sbjct: 74  FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY  ++ TF  +++  C   ++ +A SL   M+KSG  PNVV +N +I+  C+ G+L 
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL+L  +M       +  + VT+N ++ G C  GR   A  +   M+K  I+ +V T+ 
Sbjct: 194 IALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LID + + G+ +EA  L  EM++  + PNNV YNS I+ L   G +  A      M  K
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P+  TY+ L  G C+   V +  KL  ++  E    D ++YN LI+  C+   L  A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             +   M+ R + PDIIT+  L+ G C  G IE A+  +++M++ EK   +V YN +I+G
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           LCK   ++ A  L       G+  DA TY  +I G   NG   EA  +   M+  GI
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 227/467 (48%), Gaps = 7/467 (1%)

Query: 190  HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            H +K ++    + L+ EM+    + ++  F  V+  + K  K +  + LY++M   GI  
Sbjct: 581  HCIKFDDA---FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISH 637

Query: 250  NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
            ++  F ++I+  C+   L  AL L  KM  +      P+ VT   ++NGFC+  R + A 
Sbjct: 638  DLYSFTILIHCFCRCSRLSLALALLGKMMKLG---FRPSIVTLGSLLNGFCQGNRFQEAV 694

Query: 310  EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
             +  +M   G   NV  Y T+I+G  +      AL +   M K+G+  + V YN+ I  L
Sbjct: 695  SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 754

Query: 370  FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               G    A  +L DM+ + I P+   ++ L     + G + +A  L+ +++   +V + 
Sbjct: 755  SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 814

Query: 430  YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++YN LIN  C    L  AK +   M+ +G  PD++TY TLI G+CK   +E  ++++  
Sbjct: 815  FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 874

Query: 490  MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
            M       +   YN++I+G C+   L+ A+ +       G+  D +TYN L++    NGK
Sbjct: 875  MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 934

Query: 549  IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
            I +A  M  +++   + V+ + YNI+I  LC+    ++A  L + +   G+ PD + Y T
Sbjct: 935  IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 994

Query: 609  LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +++   +     E  +L   M   G  P  + Y+  +       SAE
Sbjct: 995  MISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 1041



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 205/394 (52%), Gaps = 10/394 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   ++ +F ++I+  C+  +L  ALS+  +M+K G  P++V F  +++  C V  +  A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             L   M V SG    PN V +N +I+G CK G +  A E+   M K G+  +V TY TL
Sbjct: 161 FSLVILM-VKSGYE--PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           + G    G   +A R+  +M+KR + P+ V + + I     +G+++ A  +  +MI   +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P++ TY+ +  GLC +G +  A K  + +  +    +  +YN LI+  CK   +    +
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M   G   DI TY TLI GYC+ G +  A+ ++  M      P+++ +  +++GLC
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397

Query: 511 KDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            +  +++A      + ++ + IG+   + YN +I+G     K+ +A+ +F  +   G+  
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGI---VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +   Y I+I  LCK G  ++A EL++ M   GII
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 207/459 (45%), Gaps = 53/459 (11%)

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
            R +  Y+E +  G++ ++              + E+A +L++ M+ S   P++V F  +
Sbjct: 32  ARAFSDYREKLRTGFLHSI--------------RFEDAFALFFEMVHSQPLPSIVDFTRL 77

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           +     +   E  +   +KM +     +  +  +   +I+ FC+  R+ FA  +   M+K
Sbjct: 78  LTATANLRRYETVIYFSQKMELYG---ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK 134

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G + ++ T+ +L+ G+       +A  L   MVK G  PN VVYN+             
Sbjct: 135 LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT------------- 181

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
                                 L  GLC+NG +  A +L N++ ++ +  D  +YN L+ 
Sbjct: 182 ----------------------LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC S   + A ++L  M+ R + PD++T+  LID + K GN++ A ++Y+ M +    P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279

Query: 498 NLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
           N V YNSIINGLC    L DA K+    + +    + +TYNTLI+G+     + E   +F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             M   G   +   YN LI+  C+ G  + A ++   M+   + PD +T+  L+     N
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
              E  +   DDM  S        YN +I  L      E
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 142/600 (23%), Positives = 269/600 (44%), Gaps = 62/600 (10%)

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           V +    + L + G L  A     L   +G       C      ++ L+    +    + 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKG-------CFPNVVTYNTLISGFCKFRMVDE 334

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
              + Q++  +G +  I  +N  +    ++ ++     ++  MVS     ++ T  ++++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   ++E AL  +  M +S  +  +V +N++I+  C+   +E A +LF ++ V   + 
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV---EG 451

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V P++ T+  +I G CK G    A+E+   M + GI C +      ++ ++   S++E  
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHS--SSNKEIS 509

Query: 345 RLCDEMVKRG---------LMPNNVVYNSTI------HWLFAEG---------------- 373
               E+ +R          L+P  + ++S++      H+L  E                 
Sbjct: 510 LSLREIWERSKSNPFWMQRLIP--IAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGAS 567

Query: 374 ----------------DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
                             + A  +  +M+     P    ++ +   + +         L+
Sbjct: 568 HHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLY 627

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++    +  D YS+ ILI+  C+ + L+ A  LL  M+  G  P I+T G+L++G+C+G
Sbjct: 628 HKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQG 687

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
              + AV + ++M      PN+VIYN++INGLCK+  L+ A  +    ++ G+  DA+TY
Sbjct: 688 NRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTY 747

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTLI+G   +G+  +A  +  +M    I  N + +  LI+   K G   +AR L K MI 
Sbjct: 748 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 807

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             ++P+  TY +L+  F  +    +   + D MV  G  PD  TYN +I+     K  ED
Sbjct: 808 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 867



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 237/524 (45%), Gaps = 31/524 (5%)

Query: 9    LYKSNSP---LSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN- 64
            L + N+P   LSR+F  G    +   E +     C+          E +      S+V+ 
Sbjct: 549  LERGNNPETSLSRSFS-GASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDF 607

Query: 65   -RVVSEFRKSPKLALEFYTWVG-ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS 122
             RV++   K  K  +  Y +   EN   SH L S   ++H      R   AL L+G +M 
Sbjct: 608  TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 667

Query: 123  ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
                  +  L  LL+ +                  Q    + A  ++  +   G   ++ 
Sbjct: 668  LGFRPSIVTLGSLLNGF-----------------CQGNRFQEAVSLVDSMDGFGFVPNVV 710

Query: 183  AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
             +N  ++ L K  ++    +++  M   G   +  T+N +I  L    +  +A  L   M
Sbjct: 711  IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 770

Query: 243  LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            +K  I PNV+ F  +I+   + G+L  A  L+++   M   SV+PN  T+N +INGFC  
Sbjct: 771  VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE---MIRRSVVPNVFTYNSLINGFCIH 827

Query: 303  GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
            G +  A+ +   M+  G   +V TY TLI G+ +    E+ ++L  EM  +GL+ +   Y
Sbjct: 828  GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 887

Query: 363  NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            N+ IH     G +  A  V + M+D  + PD  TY+IL   LC NG +++A  +   + +
Sbjct: 888  NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 947

Query: 423  EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
              M  D  +YNI+I  LC+++ L  A  L  S+  +G+ PD I Y T+I G C+ G    
Sbjct: 948  SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 1007

Query: 483  AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
            A ++   MK+    P+  IY+  +    +D     +  L++A+ 
Sbjct: 1008 ADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIKAAH 1047



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 149/623 (23%), Positives = 260/623 (41%), Gaps = 71/623 (11%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL----------DSYE 140
           SH L S   ++H      R   AL ++G +M       +     LL          D++ 
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 141 IC--------KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +         +    V++ L+    + G    A +++ +++ KG    +  +N  L+ L 
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                    ++ ++M+      +V TF  +I    K+  L+EA  LY  M++S + PN V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N IIN  C  G L  A K F    +M+     PN VT+N +I+GFCK   V+   ++ 
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTF---DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M   G + ++ TY TLI GY + G    AL +   MV R + P+ + +   +H L   
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G++E AL    DM +         Y+I+  GLC+   V++A++L  ++  E +  DA +Y
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            I+I  LCK+     A +L+  M   G+I  +      ++ +    N E ++ + E  ++
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEH-SSSNKEISLSLREIWER 518

Query: 493 VEKKPNL------VIYNSIINGLCKDASL------DAAKSLLQASQRIGLLDAITYNTLI 540
            +  P        + ++S + G  +   L      +   SL ++    G      Y   +
Sbjct: 519 SKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFS--GASHHHHYRERL 576

Query: 541 NGYFINGKIAEAFAMFSEM-----------------------------------RNVGIA 565
                  K  +AF++F EM                                    N+GI+
Sbjct: 577 RNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGIS 636

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   + ILI+  C+      A  L+  M+  G  P  VT  +L+  F +    +E + L
Sbjct: 637 HDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL 696

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
            D M   G  P+   YN +I+ L
Sbjct: 697 VDSMDGFGFVPNVVIYNTVINGL 719


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 242/484 (50%), Gaps = 8/484 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRF--WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           SI  +N  LS + K+ +        L  +M+  GY  ++ T + ++   C   ++ +A++
Sbjct: 41  SIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 100

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L  +M++ G  P+ + F  +I+          A+ L  +M V  G    PN VT+  ++N
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRG--CQPNLVTYGVVVN 157

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G CK G ++ A  +   M  A I+ +V  + T+ID   +    ++AL L  EM  +G+ P
Sbjct: 158 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 217

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V Y+S I  L + G    A  +LSDMI+K I P+  T++ L     + G   +A KLH
Sbjct: 218 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 277

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           + +++  +  D ++YN LIN  C  + L  AKQ+   M+ +   PD+ TY TLI G+CK 
Sbjct: 278 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 337

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
             +E   +++  M       + V Y ++I GL  D   D A+ + +     G+  D +TY
Sbjct: 338 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 397

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + L++G   NGK+ +A  +F  M+   I ++   Y  +I  +CK G      +L   + L
Sbjct: 398 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 457

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSA 654
            G+ P+ VTY T+++        +E   L   M   G  PD+ TYN +I   L  G+K+A
Sbjct: 458 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 517

Query: 655 EDQV 658
             ++
Sbjct: 518 SAEL 521



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 251/541 (46%), Gaps = 53/541 (9%)

Query: 90  FSHSLESSCAIVHLLVNWRR---FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           + H     C  V   ++W +    DDA+ L G ++ +  +  +     LL +    K   
Sbjct: 2   YYHPRRRDCLFVG--ISWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK-- 57

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             FD ++           +  ++ K+   G+  SI   ++ L+       I     L  +
Sbjct: 58  --FDLVI-----------SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  GY  +  TF  +I+ L    K  EA++L  RM++ G  PN+V + +++N  C+ GD
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 164

Query: 267 LEFALKLFRKMGV--------------------------------MSGDSVLPNSVTHNC 294
           ++ A  L  KM                                  M    + PN VT++ 
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 224

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I+  C  GR   A ++   MI+  I+ N+ T+  LID + + G   EA +L D+M+KR 
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P+   YNS I+       ++ A  +   M+ K   PD  TY+ L KG C++  V+   
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 344

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L  ++    +VGD  +Y  LI  L    +   A+++   M+  G+ PDI+TY  L+DG 
Sbjct: 345 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 404

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           C  G +E A++V++ M+K E K ++ IY ++I G+CK   +D    L  +    G+  + 
Sbjct: 405 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 464

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYNT+I+G      + EA+A+  +M+  G   +   YN LI    + G    + EL++ 
Sbjct: 465 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 524

Query: 594 M 594
           M
Sbjct: 525 M 525



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 219/432 (50%), Gaps = 6/432 (1%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG--DLEFALKLFRKMGVMSGDSV 285
           K+ KL++A+ L+  M+KS   P++  FN +++   ++   DL  +L L  KM  +  +  
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE-- 76

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            P+ VT + ++NG+C   R+  A  +   M++ G   +  T+ TLI G      + EA+ 
Sbjct: 77  -PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L D MV+RG  PN V Y   ++ L   GD++ A  +L+ M    I  D   ++ +   LC
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           +   V  A  L  ++  + +  +  +Y+ LI+ LC     + A QLLS MI + + P+++
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-A 524
           T+  LID + K G    A +++++M K    P++  YNS+ING C    LD AK + +  
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
             +    D  TYNTLI G+  + ++ +   +F EM + G+  + V Y  LI  L   G  
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             A+++ K M+  G+ PD +TY+ L+     N   E+ +E+ D M  S +  D   Y  +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 645 ISPLLGEKSAED 656
           I  +      +D
Sbjct: 436 IEGMCKAGKVDD 447



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 203/412 (49%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G  + A++++ K++       +  +N  +  L K   +    
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I PN+V FN +I+  
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G    A KL   M   S D   P+  T+N +INGFC   R++ A+++   M+     
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSID---PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY TLI G+ +    E+   L  EM  RGL+ + V Y + I  LF +GD + A  V
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC NG +++A ++ + + +  +  D Y Y  +I  +CK
Sbjct: 382 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P+++TY T+I G C    ++ A  + + MK+    P+   
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 501

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +    +   +   L+     +G++ ++F
Sbjct: 502 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 553


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 258/545 (47%), Gaps = 44/545 (8%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWK 202
           +TP + DA + A +++     A  ++  L+ +     S+ A N  LS L +         
Sbjct: 130 STP-LADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQAS 188

Query: 203 L--YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           L  ++ +V+     N  TFNL+++  C +  L +ALS    M   G+ P+ V +N ++N 
Sbjct: 189 LDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNA 248

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G L  A  L  +M     D V P   T+N +++ + +LG ++ A ++  AM   G 
Sbjct: 249 HCRKGMLGEARALLARM---KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNS--------------- 364
           + ++ TY  L  G  + G  +EA RL DEM + G L+P+ V YN+               
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 365 --------------------TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
                                I  L  +G++EGAL  L+ M D  + PD  TY+ L    
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G + +A+ L ++++   +  D ++ N ++  LCK      A+ LL S   RG +PD 
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           ++YGT++  Y K  N E A+++++ M + +  P++  YN++I GL +   L  A   L  
Sbjct: 486 VSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               GL+ D  TYN +I+ Y   G +  AF   ++M       + V  N L+N LC  G 
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A +L +  +  G   D +TY TL+    K+   +  +    DM   G+ PD  TYN 
Sbjct: 606 LDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNV 665

Query: 644 IISPL 648
           ++S L
Sbjct: 666 VLSAL 670



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 247/504 (49%), Gaps = 42/504 (8%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++ LV A  ++G  + A  V++ +   G    +  +N   + L +  ++   ++L 
Sbjct: 273 TRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLK 332

Query: 205 KEMVSCG-YVENVNTFNLVIYALCKECKLE-EALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            EM   G  + +V T+N +  A C +C+   +AL L   M + G+   +V  N++I   C
Sbjct: 333 DEMERLGTLLPDVVTYNTLADA-CFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLC 391

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+LE AL    KM   + D + P+ +T+N +I+  CK G +  A  +   M++ G+  
Sbjct: 392 KDGELEGALGCLNKM---ADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKL 448

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  T  T++    +    EEA  L     +RG MP+ V Y + +   F E + E AL + 
Sbjct: 449 DTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLW 508

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +MI+K + P   TY+ L KGL R G +K+A    N+++E+ +V D  +YNI+I+  CK 
Sbjct: 509 DEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKE 568

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +L  A Q  + M+     PD++T  TL++G C  G ++ A++++E+  +  KK +++ Y
Sbjct: 569 GDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITY 628

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++I  +CKD  +D A       +  GL  DA TYN +++     G+  EA  M  ++  
Sbjct: 629 NTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAE 688

Query: 562 VGI-------------AVNKV----------------------GYNILINFLCKFGCYQQ 586
            G              +V++                        Y  L+N LC  G +++
Sbjct: 689 SGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKE 748

Query: 587 ARELMKVMILHGIIPDYVTYTTLV 610
           A+ ++  M+  G+  D  TY TL+
Sbjct: 749 AKAILDEMMQKGMSVDSSTYITLM 772



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 187/403 (46%), Gaps = 40/403 (9%)

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK-AGIDCNVRTYATLIDGYARGGSS--EE 342
           LP++   +  ++ + +L     A ++ +++ +   +  +++    ++   AR  S+  + 
Sbjct: 128 LPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQA 187

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           +L     +V   L PN+  +N  +H   ++G +  AL  LS M    + PD  TY+ L  
Sbjct: 188 SLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLN 247

Query: 403 GLCRNGC-----------------------------------VKQAFKLHNQVLEEHMVG 427
             CR G                                    +KQA K+   +       
Sbjct: 248 AHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEP 307

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRG-LIPDIITYGTLIDGYCKGGNIEGAVQV 486
           D ++YN+L   LC++  +  A +L   M   G L+PD++TY TL D   K      A+++
Sbjct: 308 DLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRL 367

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFI 545
            E M++   K  LV +N +I GLCKD  L+ A   L      GL  D ITYNTLI+ +  
Sbjct: 368 LEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCK 427

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G IA+A+ +  EM   G+ ++    N ++  LCK   Y++A+ L++     G +PD V+
Sbjct: 428 AGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVS 487

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           Y T++  + K  + E  + L D+M+   ++P   TYN +I  L
Sbjct: 488 YGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGL 530



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 2/283 (0%)

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           + +L     ++   + P+H+T+++L    C  G +  A    + +    +  DA +YN L
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +N  C+   L  A+ LL+ M   G+ P   TY TL+  Y + G I+ A +V E M     
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAF 553
           +P+L  YN +  GLC+   +D A  L    +R+G L  D +TYNTL +  F     ++A 
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  EMR  G+    V +NI+I  LCK G  + A   +  M   G+ PD +TY TL+   
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            K  +  +   L D+MV  G+  D  T N ++  L  EK  E+
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEE 468



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 73/404 (18%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KAT    + +++   + G  EGA   + K+   G +  +  +N  +    K   I + + 
Sbjct: 377 KATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYT 436

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEA--------------------------- 235
           L  EMV  G   +  T N V+Y LCKE + EEA                           
Sbjct: 437 LMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYF 496

Query: 236 --------LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
                   L L+  M++  + P++  +N +I    ++G L+ A+    K+  +    ++P
Sbjct: 497 KEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAID---KLNELMEKGLVP 553

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T+N II+ +CK G +E A +    M++     +V T  TL++G    G  ++AL+L 
Sbjct: 554 DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLF 613

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +  V++G   + + YN+ I  +  +GDV+ AL   +DM  + + PD FTY+++   L   
Sbjct: 614 ESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA 673

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYS-----------------------------------Y 432
           G  ++A  + +++ E   +  ++S                                   Y
Sbjct: 674 GRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAY 733

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             L+N LC S     AK +L  M+ +G+  D  TY TL++G  K
Sbjct: 734 TKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 163/541 (30%), Positives = 264/541 (48%), Gaps = 43/541 (7%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY----EICKA---------- 144
           ++V +LV   R ++AL +   L++      +     L+  Y    E+ KA          
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 145 ----TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
               T   +  L+R CT+ G  E AY++ ++++  G   S + +N  +  L  LN+  + 
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL--LND--KL 367

Query: 201 WK----LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           WK    L+KEM   G + +  T+N++I+ LC+  K+ EAL+L+ +M ++G+ P +V ++ 
Sbjct: 368 WKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           ++   C  G ++ A+KL+ +   M G    PN VT+  ++ G       + A  +   M 
Sbjct: 427 LLLCYCVNGCMDEAVKLYTE---MPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCD--EMVKR----GLMPNNVVYNSTIHWLF 370
           + G+ CN  TY TLI+G    G      R+C+  EM+KR    G +P  + YNS I+   
Sbjct: 484 QNGVSCNDYTYNTLINGLCVVG------RVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A  V   M  K I P+  TY+    G C+  C   A K+ N V  + +  D  
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN LI   C+  N++ A Q+L  M+  GL+P+I  Y + I GY     +E A++ YE M
Sbjct: 598 AYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKM 657

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKI 549
            K     +   Y ++I+G  KD ++  A  L       G + D IT+  L +G   NG I
Sbjct: 658 IKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDI 717

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +A  +  EM  + I  N + YN+LIN   + G  Q+A  L   M+   I+PD  TY  L
Sbjct: 718 DDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL 777

Query: 610 V 610
           V
Sbjct: 778 V 778



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 250/534 (46%), Gaps = 40/534 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+++V    + G  E A  +  +L   G  +S+      +       E+ +   +++E 
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G V    T+ ++I    +E   E+A  L  +M   G+ P+   FNM+I         
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ LF++M     DS +P++ T+N +I+  C+  ++  A  +   M + G+   + TY
Sbjct: 369 KDAVSLFKEMA----DSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L+  Y   G  +EA++L  EM  +G  PN V Y + +     +   + A  +L++M  
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  + +TY+ L  GLC  G V +  ++  +   E  V  A +YN +IN   K+  + +
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M  +G+ P+I+TY + IDGYCK    + A+++  +++    +P++  YNS+I 
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIY 604

Query: 508 GLCKDASLDAAKSLLQASQRIGL------------------------------------L 531
           G C++ ++  A  +L    + GL                                    L
Sbjct: 605 GFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDL 664

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D  TY TLI+G+  +G +  A  ++SEM   G   + + +  L + LC+ G    AR+L+
Sbjct: 665 DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLL 724

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             M    I P+ + Y  L+  + +N   +E   LHD+M+   + PD+ TY+ ++
Sbjct: 725 DEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 241/545 (44%), Gaps = 40/545 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +FD ++RAC + G  + A  +  ++            +  ++ L KL +  R   + ++M
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G+V    TFN V+  L K  ++EEAL +   +L +G   +VV    +++  C   ++
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +F +      D ++P  VT+  +I G  + G  E A E+   M   G+  +   +
Sbjct: 299 RKALDIFEET---LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEF 355

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I G       ++A+ L  EM   G+ P+   YN  IHWL     +  AL +   M +
Sbjct: 356 NMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNE 414

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ---------------VLEEHMVGDA--- 429
             + P   TY  L    C NGC+ +A KL+ +               +++ H+   A   
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 430 -----------------YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
                            Y+YN LIN LC    +    ++L      G +P  +TY ++I+
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G+ K G +  A  VY+ M      PN+V Y S I+G CK +  D A  +L   +  GL  
Sbjct: 535 GFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRP 594

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D   YN+LI G+   G ++ A  +   M   G+  N   YN  I         ++A    
Sbjct: 595 DIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFY 654

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + MI  GI  D  TYTTL+  FSK+ +    ++L+ +MV  G  PD+ T+ A+   L   
Sbjct: 655 EKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRN 714

Query: 652 KSAED 656
              +D
Sbjct: 715 GDIDD 719



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 221/477 (46%), Gaps = 40/477 (8%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM   G+  +   F++V+ A  KE   ++A+ L+  M  S I P+    ++ I   C++ 
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D   AL + RKM        +P   T N +++   K GR+E A  I+  ++  G   +V 
Sbjct: 227 DANRALLVLRKM---QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVV 283

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
              TL+ GY       +AL + +E ++ GL+P +V Y   I     EG  E A  +   M
Sbjct: 284 LATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM 343

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            D  + P    ++++ KGL  +   K A  L  + + +  + DA++YNILI++LC+   +
Sbjct: 344 RDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE-MADSGIPDAFTYNILIHWLCQRRKI 402

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   M   G+ P I+TY +L+  YC  G ++ AV++Y  M      PN+V Y ++
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 506 INGLCKDASLDAAKSLLQASQRIGL----------------------------------- 530
           + G    A+ D A +LL   ++ G+                                   
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
              A+TYN++ING+   G +  AFA++ +M   GI  N V Y   I+  CK  C   A +
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           ++  +   G+ PD   Y +L+  F +  +    +++   M+  G+ P+   YN+ I+
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFIT 639



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 1/184 (0%)

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AI 534
           K G  + AV++++ M   E +P+  + +  I  LCK    + A  +L+  Q  G +    
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T+N++++     G++ EA  +  E+   G  ++ V    L++  C     ++A ++ +  
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  G++P  VTYT L+   ++   PE+  EL   M   G+ P    +N +I  LL +K  
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 655 EDQV 658
           +D V
Sbjct: 369 KDAV 372


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 258/542 (47%), Gaps = 26/542 (4%)

Query: 66  VVSEFRKSPKLALEFYTWVGENNRFSHSL-ESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
            +S  R SP LA E Y  +GE    SH+   +S A +H L            + + + A 
Sbjct: 51  TLSLLRASPGLASELYGLIGEP---SHAFTPASLATLHSLAARHCIPPPSASLLSKLLAR 107

Query: 125 SVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
             SP +    L DS       P V  F++L+ A  + G   G  ++   ++       I 
Sbjct: 108 FSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIV 167

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCG--YVENVNTFNLVIYALCKECKLEEALSLYY 240
            +   L+ L K   +G   K+   M S G     ++   N V+  LCK  +L++A+    
Sbjct: 168 TYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVD 227

Query: 241 RMLKS--GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             ++   G  PN V +N + +  C+VGD++ A ++  +M     + V PN +T N I+ G
Sbjct: 228 ERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERM---EKEGVTPNVITMNTIVGG 284

Query: 299 FCKLGRV----EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            C++GRV    +F  E R   ++A    N  TY+TL+  +    +   A+ L  EM  +G
Sbjct: 285 LCRVGRVGAALDFFREKRTTWLEA--RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQG 342

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+ V+Y + I  L   G +  A  + + M       D   Y+IL  G CR   + +A 
Sbjct: 343 YPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAH 402

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L  ++    +  D Y+YN L++ LCK+ + +A  +LL +MI  G  P ++T+GTL+ GY
Sbjct: 403 QLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGY 462

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           CK G  + A++++ +M +   +PN VIYN++I+ LCK   +D A  L    +   +  + 
Sbjct: 463 CKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANV 522

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG------CYQQA 587
            TYN L+ G        +AF +  +M+      + V  ++L+ +L + G      C+ + 
Sbjct: 523 TTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQ 582

Query: 588 RE 589
           R+
Sbjct: 583 RD 584



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 211/459 (45%), Gaps = 14/459 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   + +     +V+TFN ++ AL +   L     L+  M ++ + P++V + +++N  C
Sbjct: 118 LRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLC 177

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA-----EEIRYAMIK 317
           + G +  ALK+  +M    G  V  + V  N +++G CK+GR++ A     E +R     
Sbjct: 178 KAGLVGDALKVLDRMSS-PGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVH-- 234

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G   N  TY  L D   R G  + A ++ + M K G+ PN +  N+ +  L   G V  
Sbjct: 235 -GCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGA 293

Query: 378 ALFVLSDMIDKHICP--DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           AL    +     +    +  TYS L         V  A +L +++ ++    DA  Y  +
Sbjct: 294 ALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTM 353

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ L ++  L  A  + +SM   G   D   Y  LI G+C+   +  A Q++E MK    
Sbjct: 354 ISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGL 413

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFA 554
           +P++  YN++++ LCK     A   LL      G   ++ T+ TL++GY   GK  EA  
Sbjct: 414 QPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALK 473

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F  M    I  N V YN LI+FLCK      A +L   M  + +  +  TY  L+    
Sbjct: 474 IFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQ 533

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS--PLLGE 651
               PE+  EL D M     +PD  T + ++   P +GE
Sbjct: 534 DKNMPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIGE 572



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 189/418 (45%), Gaps = 42/418 (10%)

Query: 234 EALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +A S     L +G   P+V  FN +++   + G+L    +LF  M      SV P+ VT+
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSM---REASVKPDIVTY 169

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGID--CNVRTYATLIDGYARGGSSEEALRLCDEM 350
             ++N  CK G V  A ++   M   G D   ++    T++DG  + G  ++A+   DE 
Sbjct: 170 GILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDER 229

Query: 351 VKR--GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +++  G  PN V YN         GD++ A  ++  M  + + P+  T + +  GLCR G
Sbjct: 230 MRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVG 289

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V  A     +                              +  + +  RG   + +TY 
Sbjct: 290 RVGAALDFFRE------------------------------KRTTWLEARG---NAVTYS 316

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TL+  +    N+  A++++  M      P+ V+Y ++I+GL +   L  A ++  + ++ 
Sbjct: 317 TLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKA 376

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G  LD   YN LI G+    ++ EA  +F EM+  G+  +   YN L++ LCK G +   
Sbjct: 377 GFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAV 436

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            EL+  MI  G  P  VT+ TLV  + K    +E +++   M  + + P+   YN +I
Sbjct: 437 DELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLI 494


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 216/405 (53%), Gaps = 5/405 (1%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           GI P+V  FN++I   C+   L  A+ +   M       ++P+  T   ++ G+ + G +
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDM---PSYGLVPDEKTFTTVMQGYIEEGDL 240

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNS 364
           + A  IR  M++ G   +  +   ++ G+ + G  E+AL    EM  + G  P+   +N+
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++ L   G V+ A+ ++  M+ +   PD +TY+ +  GLC+ G VK+A ++ +Q++   
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              +  +YN LI+ LCK N +  A +L   +  +G++PD+ T+ +LI G C   N   A+
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGY 543
           +++E M+    +P+   YN +I+ LC    LD A ++L+  +  G   + ITYNTLI+G+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
               K  EA  +F EM   G++ N V YN LI+ LCK    + A +LM  MI+ G  PD 
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            TY +L+T F +    ++  ++   M  +G  PD  TY  +IS L
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 238/477 (49%), Gaps = 5/477 (1%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K+ V G    +  +N  +  L + +++     + ++M S G V +  TF  V+    +E 
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238

Query: 231 KLEEALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            L+ AL +  +M++ G  W NV   N+I++  C+ G +E AL   ++M   + D   P+ 
Sbjct: 239 DLDGALRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFIQEMS--NQDGFFPDQ 295

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T N ++NG CK G V+ A EI   M++ G D +V TY ++I G  + G  +EA+ + D+
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+ R   PN V YN+ I  L  E  VE A  +   +  K I PD  T++ L +GLC    
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            + A +L  ++  +    D ++YN+LI+ LC    L  A  +L  M + G    +ITY T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRI 528
           LIDG+CK      A ++++ M+      N V YN++I+GLCK   + DAA+ + Q     
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D  TYN+L+  +   G I +A  +   M + G   + V Y  LI+ LCK G  + A 
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +L++ + + GI      Y  ++    +     E I L  +M+    +P +     I+
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 247/485 (50%), Gaps = 5/485 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G     H +N  L+ LV  N +      + +M   G   +V+TFN++I ALC+  +L  A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           + +   M   G+ P+   F  ++    + GDL+ AL++  +M V  G S   ++V+ N I
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM-VEFGCSW--SNVSVNVI 265

Query: 296 INGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++GFCK GRVE A      M  + G   +  T+ TL++G  + G  + A+ + D M++ G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+   YNS I  L   G+V+ A+ VL  MI +   P+  TY+ L   LC+   V++A 
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L   +  + ++ D  ++N LI  LC + N   A +L   M  +G  PD  TY  LID  
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           C  G ++ A+ + + M+      +++ YN++I+G CK      A+ +    +  G+  ++
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYNTLI+G   + ++ +A  +  +M   G   +K  YN L+   C+ G  ++A ++++ 
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M  +G  PD VTY TL++   K    E   +L   + + G++     YN +I  L  ++ 
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625

Query: 654 AEDQV 658
             + +
Sbjct: 626 TTEAI 630



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 195/412 (47%), Gaps = 20/412 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           IVH      R +DAL  +  + + +   P        D Y         F+ LV    + 
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFP--------DQY--------TFNTLVNGLCKA 308

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +++  +  +G+   ++ +N+ +S L KL E+    ++  +M++     N  T+
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I  LCKE ++EEA  L   +   GI P+V  FN +I   C   +   A++LF +   
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE--- 425

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M      P+  T+N +I+  C  G+++ A  +   M  +G   +V TY TLIDG+ +   
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
           + EA  + DEM   G+  N+V YN+ I  L     VE A  ++  MI +   PD +TY+ 
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L    CR G +K+A  +   +       D  +Y  LI+ LCK+  +  A +LL S+ ++G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNLVIYNSIINGLC 510
           +      Y  +I G  +      A+ ++  M ++ E  P+ V Y  +  GLC
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 140/290 (48%), Gaps = 5/290 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++L++          A ++ ++++ KG       +N  +  L    ++     + K+M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +V T+N +I   CK  K  EA  ++  M   G+  N V +N +I+  C+   +
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A +L  +M +M G    P+  T+N ++  FC+ G ++ A +I  AM   G + ++ TY
Sbjct: 522 EDAAQLMDQM-IMEGQK--PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI G  + G  E A +L   +  +G+      YN  I  LF +     A+ +  +M++
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638

Query: 388 KHICP-DHFTYSILTKGLCR-NGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           ++  P D  +Y I+ +GLC   G +++A     ++LE+  V +  S  +L
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 229/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V I      L HL+KL
Sbjct: 61  ILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 160/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M V+GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I +++V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D   Y A+IS L 
Sbjct: 304 LIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 248/495 (50%), Gaps = 6/495 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + TP +  F+ ++ +  +I     A  +  +L++KG    +   N  ++    + +I   
Sbjct: 54  RHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +  +++  GY  +  TF  +I  LC + ++ +AL  + ++L  GI  + V +  +IN 
Sbjct: 114 FSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLING 173

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++GD   A+KL RK+    G    PN   +N II+  CK   V  A  +   M   GI
Sbjct: 174 VCKIGDTRGAIKLVRKI---DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGI 230

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY TLI G+      +EA+ L +EMV + + PN   YN  +  L  EG V+ A  
Sbjct: 231 SADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKN 290

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL+ M+   + PD  TYS L  G      +K+A  + N +    +  D +SY ILIN  C
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFC 350

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  L   M  + ++P I+TY +LIDG CK G I     + + M+      N++
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVI 410

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEM 559
            YNS+I+GLCK+  LD A +L    +  G+   + T+  L++G    G++ +A   F ++
Sbjct: 411 TYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDL 470

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G  ++   YN++IN  CK G  ++A  ++  M  +G +P+ VT+  ++    K    
Sbjct: 471 LTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDEN 530

Query: 620 EEVIELHDDMVLSGV 634
           ++  +L   M+  G+
Sbjct: 531 DKAEKLLRQMICRGL 545



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 225/444 (50%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M+   +   +  FN ++ +  K      A+SL +R+   GI P+++  N++IN  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G + F   +  K+         P+++T   +I G C  G+V  A      ++  GI  +
Sbjct: 107 MGQITFGFSVLAKI---LKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFD 163

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y TLI+G  + G +  A++L  ++  R   PN  +YN+ I  L     V  A  + S
Sbjct: 164 QVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFS 223

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K I  D  TY+ L  G C    +K+A  L N+++ + +  + Y+YNIL++ LCK  
Sbjct: 224 EMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  AK +L+ M+   + PD+ITY TL+DGY     ++ A  V+  M  +   P++  Y 
Sbjct: 284 KVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYT 343

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +ING CK+  +D A +L +   +  ++  I TY++LI+G   +G+I+  + +  EMR+ 
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           GI  N + YN LI+ LCK G   +A  L   M   GI P   T+T L+    K    ++ 
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDA 463

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            E   D++  G   D   YN +I+
Sbjct: 464 QEAFQDLLTKGYHLDVYKYNVMIN 487



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 204/383 (53%), Gaps = 3/383 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    +IG T GA  +++K+  +    ++  +N  +  L K   +   + L+ EM 
Sbjct: 167 YGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 226

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   +V T+  +IY  C   KL+EA+ L   M+   I PNV  +N++++  C+ G ++
Sbjct: 227 AKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +   + VM    V P+ +T++ +++G+  +  ++ A+ +  AM   G+  +V +Y 
Sbjct: 287 EAKNV---LAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYT 343

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LI+G+ +    +EAL L  EM ++ ++P  V Y+S I  L   G +     ++ +M D+
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I  +  TY+ L  GLC+NG + +A  L N++ ++ +   ++++ IL++ LCK   L  A
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDA 463

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++    ++ +G   D+  Y  +I+G+CK G +E A+ +   M++    PN V ++ IIN 
Sbjct: 464 QEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINA 523

Query: 509 LCKDASLDAAKSLLQASQRIGLL 531
           L K    D A+ LL+     GLL
Sbjct: 524 LFKKDENDKAEKLLRQMICRGLL 546



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 200/418 (47%), Gaps = 39/418 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A+S + RML     P ++ FN I++   ++     A+ L  ++ +     + P+ +T
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLEL---KGIQPDLIT 96

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC +G++ F                                      +  +++
Sbjct: 97  LNILINCFCHMGQITFG-----------------------------------FSVLAKIL 121

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KRG  P+ + + + I  L  +G V  AL     ++ + I  D  +Y  L  G+C+ G  +
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A KL  ++       +   YN +I+ LCK   ++ A  L S M  +G+  D++TY TLI
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G+C    ++ A+ +   M      PN+  YN +++ LCK+  +  AK++L    +  + 
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVK 301

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITY+TL++GYF+  ++ +A  +F+ M  +G+  +   Y ILIN  CK     +A  L
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNL 361

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            K M    ++P  VTY++L+    K+     V +L D+M   G+  +  TYN++I  L
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGL 419



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 177/351 (50%), Gaps = 3/351 (0%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
            + K    +++ ++ A  +      AY +  ++  KG S  +  +   +      +++  
Sbjct: 193 RLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKE 252

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L  EMV      NV T+N+++ ALCKE K++EA ++   MLK+ + P+V+ ++ +++
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMD 312

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
               V +L+ A  +F  M +M    V P+  ++  +INGFCK   V+ A  +   M +  
Sbjct: 313 GYFLVYELKKAQHVFNAMSLM---GVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +   + TY++LIDG  + G       L DEM  RG+  N + YNS I  L   G ++ A+
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAI 429

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            + + M D+ I P  FT++IL  GLC+ G +K A +    +L +    D Y YN++IN  
Sbjct: 430 ALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGH 489

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           CK   L  A  +LS M   G +P+ +T+  +I+   K    + A ++   M
Sbjct: 490 CKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 157/331 (47%), Gaps = 36/331 (10%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  ++D +A+      A+ L   +  +G+ P+ +  N  I+     G +     VL+ ++
Sbjct: 62  FNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            +   P   T++ L KGLC  G V +A   H++                           
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDK--------------------------- 154

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
                   ++ +G+  D ++YGTLI+G CK G+  GA+++   +     KPN+ +YN+II
Sbjct: 155 --------LLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTII 206

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LCK   +  A  L       G+  D +TY TLI G+ I  K+ EA  + +EM    I 
Sbjct: 207 DALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTIN 266

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   YNIL++ LCK G  ++A+ ++ VM+   + PD +TY+TL+  +      ++   +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHV 326

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            + M L GV+PD  +Y  +I+     K  ++
Sbjct: 327 FNAMSLMGVTPDVHSYTILINGFCKNKMVDE 357



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 1/248 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A    N++L          +N +++   K  + + A  L   + ++G+ PD+IT   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+ +C  G I     V   + K   +P+ + + ++I GLC    ++ A          G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D ++Y TLING    G    A  +  ++       N   YN +I+ LCK+    +A 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   M   GI  D VTYTTL+  F      +E I L ++MVL  ++P+  TYN ++  L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 649 LGEKSAED 656
             E   ++
Sbjct: 280 CKEGKVKE 287


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 164/626 (26%), Positives = 293/626 (46%), Gaps = 46/626 (7%)

Query: 49  KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           ++L   AP LT +L++  +   R     A+  +        F  SL +   ++H+LV  R
Sbjct: 82  RLLSSSAP-LTPALLHAALRRVRLDADAAVHLFRLAP----FPPSLLAHAQLLHILVRAR 136

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R  DA  ++ +L+SA   +P  F   L++ Y+    + A FD L+RA    G  +GA  V
Sbjct: 137 RSADARAILASLLSARPPAPPLFPH-LVEVYKEFSFSAASFDLLLRALANAGQLDGALQV 195

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
             +++  G  +S+ + N+ L+ L +  ++G    ++++M   G + +  T  ++  A CK
Sbjct: 196 FDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCK 255

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
              +  AL     M K G+  N+V ++ ++N  C+VG    A    R +  + G    PN
Sbjct: 256 VKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDAR---RMLDSLPGRGFSPN 312

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIK-AGIDCNVRTYATLIDGYARGGSSEEALRLC 347
            VT+  ++ G+C    +E AE +   + K   +  +   +  +I+GY + G  E+A RL 
Sbjct: 313 IVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLL 372

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +EMV   L  N  VYN  I+     G +  A  +L +M    + PD ++Y+ L  G C+ 
Sbjct: 373 NEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKK 432

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + +AF+ +N +L         +YN L+   C   ++  A +L   M+ +G+ P+ I+ 
Sbjct: 433 GLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISC 492

Query: 468 GTLIDGYCKGGNIEGAVQVY-----------------------------------ENMKK 492
            TL+DG+ K G  E A+ ++                                   + MK+
Sbjct: 493 STLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQ 552

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAE 551
               P+++ Y ++ +G CK   +D A  +L   + +G    I  +N+LI G+FI  +  +
Sbjct: 553 WRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGK 612

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
              +  EM N G++ N V Y  LI   CK G    A  L   MI  G++P+    ++LV+
Sbjct: 613 VNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVS 672

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPD 637
            F +    +E   +  ++V + + PD
Sbjct: 673 CFYRKGKFDEANLVLQNLVGTDMIPD 698



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 252/528 (47%), Gaps = 36/528 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ ++    ++G    A++++ ++   G     +++N+ +    K   + + ++ Y  M
Sbjct: 386 VYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM 445

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G+     T+N ++   C    +++AL L++ MLK GI PN +  + +++   + G  
Sbjct: 446 LRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKT 505

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL L+++        +  N+ T N +ING CK+ R+  AEE+   M +     ++ TY
Sbjct: 506 EKALNLWKET---LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITY 562

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF---AEGDVEGALFVLSD 384
            TL  GY + G  + A R+ +E+   G  P    +NS I   F     G V   LF   +
Sbjct: 563 RTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF---E 619

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M ++ + P+   Y  L  G C+ G +  A+ L+ +++E+ +V + +  + L++   +   
Sbjct: 620 MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGK 679

Query: 445 LAAAKQLLSSMIVRGLIPDI--------------------------ITYGTLIDGYCKGG 478
              A  +L +++   +IPDI                          I +  +I G CK G
Sbjct: 680 FDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLG 739

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
            IE A  +  ++K      +   Y+S+I+G      +D A  L      +GL  + +TYN
Sbjct: 740 RIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYN 799

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           +LI G   +G+++ A ++F ++   GI+ N + YN LI+  CK G   +A +L + MI  
Sbjct: 800 SLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEE 859

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           GI P   TY+ L+         EE I+L D M+ + V P+  TY  +I
Sbjct: 860 GIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 210/459 (45%), Gaps = 59/459 (12%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           AT   ++AL++    +G+ + A  +   +  KG + +  + +  L    K  +  +   L
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNL 511

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +KE ++ G  +N  TFN VI  LCK  ++ EA  L  +M +    P+++ +  + +  C+
Sbjct: 512 WKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCK 571

Query: 264 VGDLEFALKLFRKMG--------------------------------VMSGDSVLPNSVT 291
           +GD++ A ++  ++                                  MS   + PN+V 
Sbjct: 572 IGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVA 631

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +I G+CK G +  A  +   MI+ G+  N+   ++L+  + R G  +EA  +   +V
Sbjct: 632 YGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLV 691

Query: 352 KRGLMPN--------------------------NVVYNSTIHWLFAEGDVEGALFVLSDM 385
              ++P+                           +++N  I  L   G +E A  +L+D+
Sbjct: 692 GTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADL 751

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            DK    D+FTYS L  G   +G V  AF L + +L   +  +  +YN LI  LCKS  L
Sbjct: 752 KDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGEL 811

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           + A  L   +  +G+ P+ ITY TLID +CK G I  A ++ + M +    P +  Y+ +
Sbjct: 812 SRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSIL 871

Query: 506 INGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGY 543
           INGLC    ++ A  LL Q  +     + +TY TLI GY
Sbjct: 872 INGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGY 910



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 176/370 (47%), Gaps = 27/370 (7%)

Query: 133 EGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           E L+D  +  +  P +  +  L     +IG  + A  ++ +L+  G + +I  +N+ ++ 
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
                + G+   +  EM + G   N   +  +I   CKE  L  A +LY  M++ G+ PN
Sbjct: 604 HFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPN 663

Query: 251 -------VVCF---------NMIINEAC--------QVGDLEFALKLFRKMGVMSGDSVL 286
                  V CF         N+++                LE   K+   +  ++G +  
Sbjct: 664 LFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIG-KVANFIDTVAGGNHH 722

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
              +  N +I G CKLGR+E A+ +   +   G   +  TY++LI G +  G  + A  L
Sbjct: 723 SAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDL 782

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D M+  GL PN V YNS I+ L   G++  A+ +   +  K I P+  TY+ L    C+
Sbjct: 783 RDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCK 842

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +G + +AFKL  +++EE +    ++Y+ILIN LC    +  A +LL  MI   + P+ +T
Sbjct: 843 DGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVT 902

Query: 467 YGTLIDGYCK 476
           Y TLI GY +
Sbjct: 903 YWTLIQGYVR 912



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 37/335 (11%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           ++  L+   A  G  + AL++ DEM   G   +    NS ++ L   GD+   + V   M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                 PD FT +I+ K                          AY         CK   +
Sbjct: 235 QRAGALPDKFTVAIMAK--------------------------AY---------CKVKGV 259

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A + +  M   G+  +++ Y  +++GYC+ G    A ++ +++      PN+V Y  +
Sbjct: 260 VHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLL 319

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           + G C + +++ A+ ++Q  ++   L  D   +  +INGY   G++ +A  + +EM +  
Sbjct: 320 VKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSR 379

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           + VN   YNI+IN  CK G   +A  ++  M   G+ PD  +Y +LV  + K     +  
Sbjct: 380 LQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAF 439

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           E ++ M+ +G +    TYNA++       S +D +
Sbjct: 440 ETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 12/250 (4%)

Query: 109 RFDDALLLMGNLMSAN-----SVSPLEF--LEGLLDSYEICKATPA--VFDALVRACTQI 159
           +FD+A L++ NL+  +     S   LE   +   +D+        A  +++ ++    ++
Sbjct: 679 KFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKL 738

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E A +++  LK KG       +++ +        +   + L   M+S G   N+ T+
Sbjct: 739 GRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTY 798

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +IY LCK  +L  A+SL+ ++   GI PN + +N +I++ C+ G +  A KL ++M  
Sbjct: 799 NSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM-- 856

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              + + P   T++ +ING C  G +E A ++   MI+  +D N  TY TLI GY R  S
Sbjct: 857 -IEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCES 915

Query: 340 SEEALRLCDE 349
            +  +   D+
Sbjct: 916 VDVPIMPLDQ 925


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 222/434 (51%), Gaps = 4/434 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F  ++ +L K      A+SL  +M   GI P++V  +++IN  C +G + F+   F  +G
Sbjct: 135 FGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS---FSVLG 191

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      PN++    ++ G C  G V+ +      ++  G   N  +Y TL++G  + G
Sbjct: 192 KILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIG 251

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  A++L   +  R   P+ V+YN+ I  L  +  V  A    ++M  + I PD  TYS
Sbjct: 252 ETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYS 311

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +  AF L N++  +++  D Y+Y ILI+ LCK   L  AK LL  M   
Sbjct: 312 TLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKE 371

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P+++TY TL+DGYC  G +  A Q++  M + E  P++  YN +INGLCK  S+D A
Sbjct: 372 GVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEA 431

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +LL+      ++ + +TYN+LI+G   +G+I  A  +  E+ + G   + + Y  L++ 
Sbjct: 432 MNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDG 491

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L   M   GI P+  TYT L+    K    +   +L   +++ G   D
Sbjct: 492 LCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCID 551

Query: 638 NQTYNAIISPLLGE 651
             TYN +I  L  E
Sbjct: 552 VYTYNVMIGGLCKE 565



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 249/495 (50%), Gaps = 6/495 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + TP++  F  ++ +  ++     A  + ++++VKG    +   +  ++    L ++   
Sbjct: 127 RNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFS 186

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +  +++  GY  N      ++  LC + +++++L  + +++  G   N V +  ++N 
Sbjct: 187 FSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG 246

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++G+   A+KL R   ++   S  P+ V +N II+G CK   V  A +    M   GI
Sbjct: 247 LCKIGETRCAIKLLR---MIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY+TLI G+   G    A  L +EM  + + P+   Y   I  L  EG ++ A  
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L  M  + + P+  TYS L  G C  G V  A ++ + +++  +     SYNI+IN LC
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC 423

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K  ++  A  LL  M+ + ++P+ +TY +LIDG CK G I  A+ + + +    +  +++
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVI 483

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y S+++GLCK+ +LD A +L    +  G+  +  TY  LI+G     ++  A  +F  +
Sbjct: 484 TYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI 543

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G  ++   YN++I  LCK G   +A  +   M  +G IPD VT+  ++    +    
Sbjct: 544 LVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDEN 603

Query: 620 EEVIELHDDMVLSGV 634
           ++  +L  +M+  G+
Sbjct: 604 DKAEKLLHEMIAKGL 618



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 200/383 (52%), Gaps = 3/383 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    +IG T  A  +++ ++ +     +  +N  +  L K   +   +  Y EM 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S G   +V T++ +I   C   +L  A SL   M    I P+V  + ++I+  C+ G L+
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L   +GVM+ + V PN VT++ +++G+C +G V  A++I +AM++  ++ +V +Y 
Sbjct: 360 EAKNL---LGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYN 416

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I+G  +G S +EA+ L  EM+ + ++PN V YNS I  L   G +  AL ++ ++  +
Sbjct: 417 IMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR 476

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  TY+ L  GLC+N  + +A  L  ++ E  +  + Y+Y  LI+ LCK   L  A
Sbjct: 477 GQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNA 536

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++L   ++V+G   D+ TY  +I G CK G ++ A+ +   M+     P+ V +  II  
Sbjct: 537 QKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRS 596

Query: 509 LCKDASLDAAKSLLQASQRIGLL 531
           L +    D A+ LL      GLL
Sbjct: 597 LFEKDENDKAEKLLHEMIAKGLL 619



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 177/363 (48%), Gaps = 1/363 (0%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+ +    I+    K+     A  +   M   GI+ ++ T + LI+ +   G    +  +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +++K G  PN ++  + +  L  +G+V+ +L     ++ +    +  +Y  L  GLC+
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G  + A KL   + +     D   YN +I+ LCK   +  A    + M  RG+ PD+IT
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLI G+C  G + GA  +   M      P++  Y  +I+ LCK+  L  AK+LL    
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           + G+  + +TY+TL++GY + G++  A  +F  M    +  +   YNI+IN LCK     
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L++ M+   ++P+ VTY +L+    K+      ++L  ++   G   D  TY +++
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 646 SPL 648
             L
Sbjct: 490 DGL 492



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 196/430 (45%), Gaps = 56/430 (13%)

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +   ++PN VT + +IN    LG++ F+  +   ++K G   N  T  TL+ G  R   +
Sbjct: 3   AAKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETR--CA 60

Query: 341 EEALRLCDEMVKRGLM----------------------P----------NNVVYNSTIHW 368
            +  R+ ++   R LM                      P          ++VV+++   +
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQF 120

Query: 369 -----------LFAEGDVEGALFVL----------SDMIDKHICPDHFTYSILTKGLCRN 407
                      +   G + G+L  +            M  K I PD  T SIL    C  
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +  +F +  ++L+     +      L+  LC    +  +      ++ +G   + ++Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
           GTL++G CK G    A+++   ++    +P++V+YN+II+GLCKD  ++ A         
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  D ITY+TLI G+ + G++  AF++ +EM    I  +   Y ILI+ LCK G  ++
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A+ L+ VM   G+ P+ VTY+TL+  +          ++   MV + V+P   +YN +I+
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN 420

Query: 647 PLLGEKSAED 656
            L   KS ++
Sbjct: 421 GLCKGKSVDE 430



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 10/277 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DAL   G L  A ++  +   EG+       K     +  L+     +G    A  +   
Sbjct: 350 DALCKEGKLKEAKNLLGVMTKEGV-------KPNVVTYSTLMDGYCLVGEVHNAKQIFHA 402

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +     + S+ ++N  ++ L K   +     L +EM+    V N  T+N +I  LCK  +
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +  AL L   +   G   +V+ +  +++  C+  +L+ A+ LF K   M    + PN  T
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMK---MKERGIQPNKYT 519

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +I+G CK  R++ A+++   ++  G   +V TY  +I G  + G  +EAL +  +M 
Sbjct: 520 YTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME 579

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
             G +P+ V +   I  LF + + + A  +L +MI K
Sbjct: 580 DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 616


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 169/679 (24%), Positives = 306/679 (45%), Gaps = 68/679 (10%)

Query: 43  LRQRKWKILEQMAPSLTNSLVNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           L++R   +LE+       +L     S   R  P LA+  +       +    L  +    
Sbjct: 58  LQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLSPTSHTY 117

Query: 102 HLLVN----WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
            +L++      R + AL   G L+       +     LL+ +   K T    D L+    
Sbjct: 118 AILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTP 177

Query: 158 QIG------------------ATEGAYDVIQKLKVKGHSV---SIHAWNNFLSHLVKLNE 196
           ++G                     G  D + ++  +G +V   ++ A+N  +    K  +
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           + +   L+KEMV  G   ++ T+N V++ALCK   +++A +   +M+   + PN   +N 
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I      G  + A+++F++M      S+LP+ VT + ++   CK G+++ A ++   M 
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEM---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 354

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G + +V +Y  +++GYA  G   +   L D M+  G+ P+   +N  I      G ++
Sbjct: 355 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 414

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A+ + ++M D  + PD  TY  +   LCR G +  A +  NQ++++ +  D Y+YN LI
Sbjct: 415 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 474

Query: 437 NYLCKSNNLAAAKQLLSSMIVRG-----------------------------------LI 461
              C   +L  AK+L+S ++  G                                   L 
Sbjct: 475 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 534

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD + Y  L+DGYC  G +E A++V++ M     +PN+V Y +++NG CK   +D   SL
Sbjct: 535 PDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL 594

Query: 522 LQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +   + G+  + I Y+ +I+G F  G+   A   F EM   GIA++   YNI++  L K
Sbjct: 595 FREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFK 654

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
             C+ +A  L K +    +  + +T  T++    +    EE  +L   +  S + P   T
Sbjct: 655 NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVT 714

Query: 641 YNAIISPLLGE---KSAED 656
           Y+ +I+ L+ E   + AED
Sbjct: 715 YSIMITNLIKEGLVEEAED 733



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 242/534 (45%), Gaps = 52/534 (9%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-------LYKEMVSCGYVEN 215
           E A+D++ +L+ +G  V     N FL+ L +                L+    S      
Sbjct: 49  EEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPR 108

Query: 216 VNTFNLVIYALCKEC-----KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           V +     YA+  +C     + E AL+ + ++L++G+  N++  N ++   C+    + A
Sbjct: 109 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 168

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYA 328
           L +        G   +P+  +++ ++   C  G+   A+++   M + G  C  NV  Y 
Sbjct: 169 LDILLHRTPELG--CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYN 226

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDG+ + G   +A  L  EMV+RG+ P+ V YNS +H L     ++ A   L  M++K
Sbjct: 227 TVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286

Query: 389 HICPDHFTY-----------------------------------SILTKGLCRNGCVKQA 413
            + P+++TY                                   S+L   LC+ G +K+A
Sbjct: 287 RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             + + +  +    D +SYNI++N       L     L   M+  G+ PD  T+  LI  
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 406

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y   G ++ A+ ++  M+    KP++V Y ++I  LC+   +D A          G+  D
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 466

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              YN LI G+  +G + +A  + SE+ N G+ ++ V ++ +IN LCK G    A+ +  
Sbjct: 467 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 526

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +  G+ PD V Y  L+  +      E+ + + D MV +G+ P+   Y  +++
Sbjct: 527 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 580



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 220/467 (47%), Gaps = 4/467 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A DV   + +KG +  + ++N  L+       +     L+  M+  G   +  TF
Sbjct: 341 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 400

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I A      L++A+ ++  M   G+ P+VV +  +I   C++G ++ A++ F +M  
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM-- 458

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                V P+   +NC+I GFC  G +  A+E+   ++  G+  ++  ++++I+   + G 
Sbjct: 459 -IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 517

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A  + D  V  GL P+ VVYN  +      G +E AL V   M+   I P+   Y  
Sbjct: 518 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 577

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+ G + +   L  ++L+  +      Y+I+I+ L ++     AK     M   G
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  DI TY  ++ G  K    + A+ +++ ++ +  K N++  N++I+G+ +   ++ AK
Sbjct: 638 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 697

Query: 520 SLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L  +  R  L+ ++ TY+ +I      G + EA  MFS M+N G   N    N ++  L
Sbjct: 698 DLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVREL 757

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            K     +A   +  +       +++T   LV  FS   +  E I  
Sbjct: 758 LKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRF 804



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 207/405 (51%), Gaps = 4/405 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L++A    G  + A  +  +++  G    +  +   ++ L ++ ++    + + +M
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +   +N +I   C    L +A  L   ++ +G+  ++V F+ IIN  C++G +
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + V  G  + P++V +N +++G+C +G++E A  +  AM+ AGI+ NV  Y
Sbjct: 519 MDAQNIF-DLTVNVG--LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 575

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY + G  +E L L  EM++RG+ P+ ++Y+  I  LF  G    A     +M +
Sbjct: 576 GTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTE 635

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I  D  TY+I+ +GL +N C  +A  L  ++   ++  +  + N +I+ + ++  +  
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 695

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L +S+    L+P ++TY  +I    K G +E A  ++ +M+    +PN  + N ++ 
Sbjct: 696 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 755

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            L K   +  A + L +  +R   L+ +T   L++ +   G   E
Sbjct: 756 ELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 800



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 136/295 (46%), Gaps = 15/295 (5%)

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           +G +M A ++  L    GL            V++ L+     +G  E A  V   +   G
Sbjct: 515 LGRVMDAQNIFDLTVNVGL-------HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
              ++  +   ++   K+  I     L++EM+  G   +   ++++I  L +  +   A 
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
             ++ M +SGI  ++  +N+++    +    + A+ LF+++  M+   V  N +T N +I
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMN---VKINIITLNTMI 684

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +G  +  RVE A+++  ++ ++ +  +V TY+ +I    + G  EEA  +   M   G  
Sbjct: 685 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 744

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL-----TKGLCR 406
           PN+ + N  +  L  + ++  A   LS + +++   +H T  +L     +KG CR
Sbjct: 745 PNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCR 799


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 218/404 (53%), Gaps = 4/404 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   MV+ G   ++ T+ +V+  LCK    + A +L  +M +  + P V+ +N II+  C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++ AL LF++M       + PN VT++ +I+  C  GR   A  +   MI+  I+ 
Sbjct: 63  KYKHMDDALNLFKEM---ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 119

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V T++ LID + + G   EA +L DEMVKR + P+ V Y+S I+       ++ A  + 
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ KH  PD  TY+ L KG C+   V++  ++  ++ +  +VG+  +YNILI  L ++
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            +   A+++   M+  G+ P+I+TY TL+DG CK G +E A+ V+E +++ + +P +  Y
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +I G+CK   ++    L       G+  D + YNT+I+G+   G   EA A+F EM+ 
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G   N   YN LI    + G  + + EL+K M   G   D  T
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 193/370 (52%), Gaps = 1/370 (0%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+ VT+  ++NG CK G  + A  +   M +  ++  V  Y T+IDG  +    ++AL L
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             EM  +G+ PN V Y+S I  L   G    A  +LSDMI++ I PD FT+S L     +
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G + +A KL++++++  +     +Y+ LIN  C  + L  AKQ+   M+ +   PD++T
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLI G+CK   +E  ++V+  M +     N V YN +I GL +    D A+ + +   
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 527 RIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+   I TYNTL++G   NGK+ +A  +F  ++   +      YNI+I  +CK G  +
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              +L   + L G+ PD V Y T+++ F +  S EE   L  +M   G  P++  YN +I
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373

Query: 646 SPLLGEKSAE 655
              L +   E
Sbjct: 374 RARLRDGDRE 383



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 212/412 (51%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G T+ A++++ K++       +  +N  +  L K   +    
Sbjct: 12  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I P+V  F+ +I+  
Sbjct: 72  NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A KL+ +M   S D   P+ VT++ +INGFC   R++ A+++   M+     
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSID---PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 188

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY TLI G+ +    EE + +  EM +RGL+ N V YN  I  LF  GD + A  +
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + P+  TY+ L  GLC+NG +++A  +   +    M    Y+YNI+I  +CK
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  ++ ++G+ PD++ Y T+I G+C+ G+ E A  +++ MK+    PN   
Sbjct: 309 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 368

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D   +A+  L++  +  G     +   L+     +G++ ++F
Sbjct: 369 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 420



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 206/414 (49%), Gaps = 4/414 (0%)

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           ++L  RM+  G  P++V + +++N  C+ GD + A  L  KM       + P  + +N I
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM---EQGKLEPGVLIYNTI 57

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK   ++ A  +   M   GI  NV TY++LI      G   +A RL  +M++R +
Sbjct: 58  IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 117

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+   +++ I     EG +  A  +  +M+ + I P   TYS L  G C +  + +A +
Sbjct: 118 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 177

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   ++ +H   D  +YN LI   CK   +    ++   M  RGL+ + +TY  LI G  
Sbjct: 178 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI- 534
           + G+ + A ++++ M      PN++ YN++++GLCK+  L+ A  + +  QR  +   I 
Sbjct: 238 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 297

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN +I G    GK+ + + +F  +   G+  + V YN +I+  C+ G  ++A  L K M
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              G +P+   Y TL+    ++   E   EL  +M   G + D  T   + + L
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 160/314 (50%), Gaps = 1/314 (0%)

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           + L D MV +G  P+ V Y   ++ L   GD + A  +L+ M    + P    Y+ +  G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC+   +  A  L  ++  + +  +  +Y+ LI+ LC     + A +LLS MI R + PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           + T+  LID + K G +  A ++Y+ M K    P++V Y+S+ING C    LD AK + +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 524 -ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
               +    D +TYNTLI G+    ++ E   +F EM   G+  N V YNILI  L + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
               A+E+ K M+  G+ P+ +TY TL+    KN   E+ + + + +  S + P   TYN
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 643 AIISPLLGEKSAED 656
            +I  +      ED
Sbjct: 301 IMIEGMCKAGKVED 314



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 176/343 (51%), Gaps = 1/343 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G   ++ TY  +++G  + G ++ A  L ++M +  L P  ++YN+ I  L     
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ AL +  +M  K I P+  TYS L   LC  G    A +L + ++E  +  D ++++ 
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+   K   L  A++L   M+ R + P I+TY +LI+G+C    ++ A Q++E M    
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P++V YN++I G CK   ++    + +   + GL+ + +TYN LI G F  G    A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +F EM + G+  N + YN L++ LCK G  ++A  + + +    + P   TY  ++   
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            K    E+  +L  ++ L GV PD   YN +IS    + S E+
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 349


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 234/451 (51%), Gaps = 4/451 (0%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            M + G   +V  +N ++   C+  +++ A  +   M ++G+ PNV  +   I   C+  
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +E A  L+  M V +G  VL + VT + ++ G C+ GR   A  +   M K G   N  
Sbjct: 254 GVEEAFDLYEGM-VRNG--VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY TLID  A+ G  +E L L  EMV RG++ + V Y + + WL  +G  +     L   
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +  ++ P+  TY++L   LC+   V +A ++  ++ E+ +  +  +++ +IN   K   L
Sbjct: 371 LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLL 430

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +    M  RG+ P+++TYGTLIDG+ K    + A++VY +M     K N  I +S+
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           +NGL ++  ++ A +L + +   GL LD + Y TLI+G F  G +  AF    E+ +  +
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             + V YN+ IN LC  G +++A+  +  M   G+ PD  TY T++    +     + ++
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L  +M +S + P+  TYN +++ L G  + E
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 244/502 (48%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              ALV    + G    AY + +++   G + +   +   +  L K         L  EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G V ++ T+  ++  L K+ K +E        L   + PN V + ++I+  C+  ++
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A ++  +M      S+ PN VT + +INGF K G ++ A E +  M + GI+ NV TY
Sbjct: 396 DEAEQVLLEM---EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLIDG+ +    + AL +  +M+  G+  N  + +S ++ L   G +E A+ +  D   
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  DH  Y+ L  GL + G +  AFK   ++++ +M+ DA  YN+ IN LC       
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK  L+ M   GL PD  TY T+I  +C+ G    A+++   MK    KPNL+ YN+++ 
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL    +++ AK LL      G    ++T+  ++     + ++     +   M N G+  
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN L+  LC  G  ++A  +++ M+  GI PD +T+  L+    K+   +     +
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATY 752

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
             M+   +SP+  T+N ++  L
Sbjct: 753 AQMLHQNISPNIATFNTLLGGL 774



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 234/498 (46%), Gaps = 4/498 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F +++    + G  + A +  + +K +G + ++  +   +    K        ++Y +M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N    + ++  L +  K+EEA++L+     SG+  + V +  +I+   + GD+
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A K  +++      ++LP++V +N  IN  C LG+ + A+     M   G+  +  TY
Sbjct: 536 PTAFKFGQEL---MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I  + R G + +AL+L  EM    + PN + YN+ +  LF  G VE A ++L++M+ 
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               P   T+  + +   ++  +     +H  ++   +  D   YN L+  LC       
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M+  G+ PD IT+  LI G+CK  +++ A   Y  M      PN+  +N+++ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL     +  A ++L   ++ GL  + +TY+ L  G+       EA  ++ EM   G   
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               YN LI+   K G   QA+EL K M   G+ P   TY  LV+ +S+  +  EV +  
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCL 892

Query: 627 DDMVLSGVSPDNQTYNAI 644
            DM   G SP   T + I
Sbjct: 893 KDMKEKGFSPSKGTLSFI 910



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 199/437 (45%), Gaps = 23/437 (5%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           + N ++Y+ C+   L  A++L    L+S   P  V +N+++            L    K 
Sbjct: 75  SLNALLYSHCRLRLLRPAIAL----LRSS-RPTTVAYNILLAALSDHAHAPAVLAEMCKR 129

Query: 278 GVMSGDSVLP-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL----ID 332
           GV       P + VT N ++ G C+ G+V+ A  +  A    GI   + +  TL    I 
Sbjct: 130 GV-------PFDGVTVNTLLAGLCRNGQVDAAAAL--ADRAGGITPWMSSAGTLSLLDIA 180

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+   G +  AL + D M  +GL  + V YN+ +      G V+ A  VL  M +  + P
Sbjct: 181 GF---GDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDP 237

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  TY+      CR   V++AF L+  ++   ++ D  + + L+  LC+    + A  L 
Sbjct: 238 NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALF 297

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M   G  P+ +TY TLID   K G  +  + +   M       +LV Y ++++ L K 
Sbjct: 298 REMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQ 357

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
              D  K  L+ +    L  + +TY  LI+       + EA  +  EM    I+ N V +
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           + +IN   K G   +A E  ++M   GI P+ VTY TL+  F K    +  +E++ DM+ 
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477

Query: 632 SGVSPDNQTYNAIISPL 648
            GV  +    +++++ L
Sbjct: 478 EGVKVNKFIVDSLVNGL 494



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 178/415 (42%), Gaps = 38/415 (9%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G    A+   Q+L  +        +N F++ L  L +         EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   + +T+N +I + C++ +  +AL L + M  S I PN++ +N ++      G +E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L  +M V +G S  P+S+TH  ++    +  R++   +I   M+ AG+  ++  Y 
Sbjct: 642 KAKYLLNEM-VSAGFS--PSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYN 698

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI---------------------- 366
           TL+      G + +A  + +EM+  G+ P+ + +N+ I                      
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758

Query: 367 -------------HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
                          L + G +  A  VL +M    + P++ TY IL  G  +     +A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEA 818

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L+ +++ +  V    +YN LI+   K+  +  AK+L   M  RG+ P   TY  L+ G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           + +  N     +  ++MK+    P+    + I     K      A+ LL+   R+
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 8/200 (4%)

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           A A   L++  +R    D  +   L+  +C+   +  A+ +  +      +P  V YN +
Sbjct: 55  ALATSGLAAAAIRFRPADPASLNALLYSHCRLRLLRPAIALLRS-----SRPTTVAYNIL 109

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +  L   A   A   L +  +R    D +T NTL+ G   NG++  A A+      +   
Sbjct: 110 LAALSDHAHAPAV--LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPW 167

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           ++  G   L++ +  FG    A  +   M   G+  D V Y TLV  F +    +    +
Sbjct: 168 MSSAGTLSLLD-IAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGV 226

Query: 626 HDDMVLSGVSPDNQTYNAII 645
            D M  +GV P+  TY   I
Sbjct: 227 LDMMKEAGVDPNVATYTPFI 246


>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 521

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 235/477 (49%), Gaps = 9/477 (1%)

Query: 11  KSNSPLSRAFHVGKQFANPSTEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSE 69
           K++SP     H  +    P  +D+ F  I   +    +W+ L   + +LT   +  ++ +
Sbjct: 20  KTHSPYLPIPH--RTLPQPKGQDLDFINIFHSHFIHSQWEKLTPFSKTLTPFKIQHILLK 77

Query: 70  FRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL 129
            +    L+L+F+ WV  +N  SH+L +   ++H+L   R F  A  +   +++ NS    
Sbjct: 78  LQNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNS---- 133

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
              E LL SY +C ++P VFD L +    +     A D   K+K  G   ++ + N FLS
Sbjct: 134 NLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLS 193

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            ++ L         Y++M       NV T N+V+ A CK  +L +A  +  +M   G+ P
Sbjct: 194 SMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCP 253

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           NVV FN +I+  C  G L  ALK+   M  M  + V PN VT N +INGFCK G++  A 
Sbjct: 254 NVVTFNSLISGYCDKGLLGLALKVRDLM--MGKNGVFPNVVTFNTLINGFCKEGKLHEAN 311

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +   M  A +  NV TY TLI+G+ + G+SE  + L +EM +  +  + + YN  I  L
Sbjct: 312 RVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGL 371

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             EG  + A +++ ++   ++ P+  T+S L  G C     ++AF ++  ++      + 
Sbjct: 372 CKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNE 431

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            ++ +L +  CK+ +   A Q+L  M+ R + PD      +  G C+ G  + A+ +
Sbjct: 432 NTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRKQFALML 488



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 167/376 (44%), Gaps = 27/376 (7%)

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI-- 223
           ++ +Q      H++  H+   FL H++  N   R +K  + + S     N N F  ++  
Sbjct: 89  FNWVQTHNPNSHTLHTHS---FLLHILTKN---RNFKTAQSIFSKIITTNSNLFESLLHS 142

Query: 224 YALCKEC---------------KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           Y LC                  KL  A   + +M + G +P V   N  ++    +   E
Sbjct: 143 YTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPE 202

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
             +  +R+M     + + PN  T N +++ +CKLG +  A E+   M   G+  NV T+ 
Sbjct: 203 LVVSFYRQM---RRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFN 259

Query: 329 TLIDGYARGGSSEEALRLCDEMV-KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +LI GY   G    AL++ D M+ K G+ PN V +N+ I+    EG +  A  V S+M  
Sbjct: 260 SLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKL 319

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            ++ P+  TY+ L  G  + G  +    L  ++    +  D  +YN LI  LCK      
Sbjct: 320 ANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKK 379

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  ++  +    L+P+  T+  LI G C   N E A  VY +M +    PN   +  + +
Sbjct: 380 AAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLAS 439

Query: 508 GLCKDASLDAAKSLLQ 523
             CK+   D A  +L+
Sbjct: 440 AFCKNEDFDGAVQVLR 455



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 120/233 (51%), Gaps = 2/233 (0%)

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
            + Q+    +  + Y+ N++++  CK   L  A ++L  M   GL P+++T+ +LI GYC
Sbjct: 207 FYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYC 266

Query: 476 KGGNIEGAVQVYE-NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
             G +  A++V +  M K    PN+V +N++ING CK+  L  A  +    +   +  + 
Sbjct: 267 DKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNV 326

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           +TYNTLING+   G       +F EM    +  + + YN LI  LCK G  ++A  ++K 
Sbjct: 327 VTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKE 386

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +    ++P+  T++ L+       + E    ++  MV SG SP+  T+  + S
Sbjct: 387 LDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLAS 439



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 151/324 (46%), Gaps = 2/324 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + TL   +A       A     +M + G  P     N+ +  +      E  +     M 
Sbjct: 153 FDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMR 212

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I P+ +T +++    C+ G + +A ++  ++ +  +  +  ++N LI+  C    L 
Sbjct: 213 RNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLG 272

Query: 447 AAKQLLSSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
            A ++   M+ + G+ P+++T+ TLI+G+CK G +  A +V+  MK     PN+V YN++
Sbjct: 273 LALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTL 332

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ING  +  + +    L +  +R  +  D +TYN LI G    GK  +A  M  E+    +
Sbjct: 333 INGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNL 392

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N   ++ LI   C     ++A  + + M+  G  P+  T+  L + F KN   +  ++
Sbjct: 393 VPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQ 452

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           +  DM+   ++PD+   + + S L
Sbjct: 453 VLRDMLERFMTPDSSILSEVYSGL 476



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 2/222 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           ++ L       N L  A      M   G  P + +    +         E  V  Y  M+
Sbjct: 153 FDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMR 212

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +    PN+   N +++  CK   L+ A  +L+  + +GL  + +T+N+LI+GY   G + 
Sbjct: 213 RNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLG 272

Query: 551 EAFAMFSEMRNV-GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            A  +   M    G+  N V +N LIN  CK G   +A  +   M L  + P+ VTY TL
Sbjct: 273 LALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTL 332

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +  F +  + E  I L ++M  + V  D  TYN +I  L  E
Sbjct: 333 INGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKE 374


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 272/563 (48%), Gaps = 28/563 (4%)

Query: 99  AIVHLLVNWRRFDDALL-----------------LMGNLMSANSVSPLEFLEGLLDSYEI 141
            ++ + V    F+DAL+                 L+  L+  N +    ++  L D  +I
Sbjct: 148 TVIRVFVELSMFEDALVTYVEAKKVGVELQVCNFLLKGLVEGNQIM---YVRSLFDDMKI 204

Query: 142 CKATPAVFD-ALVRACTQIGAT---EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
              +P ++  +++ +    GA    E A +++ +++V+G   +   +  +L  L +  ++
Sbjct: 205 SGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQV 264

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
              W   + +   GY  N   FN VI+  C + ++ +A+ ++  M K G  P+V  ++++
Sbjct: 265 KSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSIL 324

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           ++  C+ GD+   L  +  +  M+ + + PN V+++ +++G C+ GRVE A E+   +  
Sbjct: 325 VDGLCKQGDV---LTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKD 381

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G   +   Y+ ++ G  +    E    L ++MV    +P+   Y+S I+       ++ 
Sbjct: 382 QGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKE 441

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL V   MI   ICP+  T +IL  G    G + +AF   ++V +  +V +  +Y ++IN
Sbjct: 442 ALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIIN 501

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LCK N       + + MI RG +PD + Y  +IDG+ K  +++ A ++Y  M     KP
Sbjct: 502 GLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKP 561

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           N+  Y S+INGLC D  L    +L +     GL  D I Y +LI  Y     +  A  +F
Sbjct: 562 NIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIF 621

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM   G++ +   Y  LI    K      A+  M+ M+  G+ P  VTYT L+  + K 
Sbjct: 622 REMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKI 681

Query: 617 CSPEEVIELHDDMVLSGVSPDNQ 639
              ++ + +++ M+ +G++PD +
Sbjct: 682 GDEKKAMVMYNSMLQAGIAPDAK 704



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 240/504 (47%), Gaps = 8/504 (1%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P V+  ++R   ++   E A  ++  ++ K   V +   N  L  LV+ N+I     L+ 
Sbjct: 143 PQVYATVIRVFVELSMFEDA--LVTYVEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFD 200

Query: 206 EMVSCGYVENVNTFNLVI--YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +M   G   N+ ++++++  Y    +  LEEA  L   M   G+ PN   +   +   C+
Sbjct: 201 DMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCR 260

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
              ++ A   F +M    G     NS   N +I+GFC  G+V  A E+   M K G   +
Sbjct: 261 AKQVKSAWN-FLQMLCQRGYPC--NSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPD 317

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y+ L+DG  + G       +  EM + G+ PN V Y+S +H L   G VE A  +  
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFK 377

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            + D+    DH  YSI+  G C++  ++  + L N ++  + V DAY+Y+ LI   C+  
Sbjct: 378 RLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHR 437

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            L  A ++   MI  G+ P+++T   L+ G+   G I  A    + +++    PNL  Y 
Sbjct: 438 QLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYR 497

Query: 504 SIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            IINGLCK +   D         +R  + D + Y+ +I+G+     + EAF ++ +M + 
Sbjct: 498 VIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDE 557

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   N   Y  LIN LC      +   L K MI  G+ PD + YT+L+  + K  + +  
Sbjct: 558 GTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAA 617

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
           +E+  +M   G+S D+  Y  +I 
Sbjct: 618 LEIFREMETEGLSADSFVYTCLIG 641



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 183/376 (48%), Gaps = 14/376 (3%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + +L+    + G  E A+++ ++LK +G       ++  L    +  ++   + L+ +MV
Sbjct: 356 YSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMV 415

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII----NEACQV 264
              +V +   ++ +IYA C+  +L+EAL ++  M+  GI PNVV   +++    NE   +
Sbjct: 416 HHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGL-I 474

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+    L   R+ GV      +PN  T+  IING CK+ +      I   MIK G   + 
Sbjct: 475 GEAFLFLDKVRQFGV------VPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDT 528

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             Y+ +IDG+ +    +EA RL  +MV  G  PN   Y S I+ L  +  +   + +   
Sbjct: 529 VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKH 588

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           MI + + PD   Y+ L    C+   +K A ++  ++  E +  D++ Y  LI    K   
Sbjct: 589 MIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLA 648

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+  +  M+ +GL P ++TY  LI GY K G+ + A+ +Y +M +    P+  +  S
Sbjct: 649 MDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKL--S 706

Query: 505 IINGLCKDASLDAAKS 520
            I GL  D   D A S
Sbjct: 707 CILGLGNDGD-DFADS 721


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 285/574 (49%), Gaps = 18/574 (3%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKLA----LEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           +  PSL ++  +RV+      P L     L F+ ++ +N      L +   +   L   R
Sbjct: 19  KTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRAR 78

Query: 109 RFDDALLLMGNLMS--ANSVSPLEFLEGLLDSYEICKATPAVF----DALVRACTQIGAT 162
           +F +    M N++    N  +    +E ++ S       P++     D L R        
Sbjct: 79  KFAE----MKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMF 134

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + + +V    + KG  +   +   FL  L +   +    +  ++MV  G    V ++  V
Sbjct: 135 DSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAV 194

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +  LCK+ ++  A +L   ++  G  P+V+ +N ++N   ++ D+    ++   + +M  
Sbjct: 195 VDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEI---LSLMEK 251

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           + V  N  T+  +I  + +  ++E AE++   M+K GI+ +V  Y ++I+   + G+ + 
Sbjct: 252 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 311

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A  L DEM +R L+PN   Y + I+     G+++ A  +++DM  K +  +   ++ L  
Sbjct: 312 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 371

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ G + +A +L N + ++    DA++ NI+ +  C+SN    AK+LL +M  RG+ P
Sbjct: 372 GYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 431

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +++++  LID YCK  N   A ++++ M+K  K P++V YN+ I   CK   ++ A  L+
Sbjct: 432 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 491

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              Q  GL+ D  TY +LI+G   +G +  A  +F+EM  +G+  N V Y ++I+ L K 
Sbjct: 492 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 551

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           G   +A +L   M   GI+PD   Y++L+    K
Sbjct: 552 GRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 221/427 (51%), Gaps = 4/427 (0%)

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           + AL +   +E  +    +M+ SGI   V  +  +++  C+ G++  A  L   M  +  
Sbjct: 160 LLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKAL---MDELVC 216

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               P+ +T+N ++NG+ ++  V    EI   M K  +D NV TY  LI+ Y+R    EE
Sbjct: 217 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 276

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A +L DEM+K+G+ P+  +Y S I+W    G+++ A  +  +M ++ + P+ +TY  L  
Sbjct: 277 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 336

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ G +K A  + N +  + +  +   +N L++  CK   +  A +L + M  +G   
Sbjct: 337 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 396

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D  T   +  G+C+    E A ++   M++    PN+V ++ +I+  CK+ +   A+ L 
Sbjct: 397 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLF 456

Query: 523 QASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  ++ G   ++ TYN  I  Y   GK+ EA+ + +EM+  G+  +   Y  LI+     
Sbjct: 457 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERAS 516

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +A EL   M   G+  + VTYT +++  SK+   +E  +L+D+M   G+ PD+  Y
Sbjct: 517 GNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIY 576

Query: 642 NAIISPL 648
           +++I+ L
Sbjct: 577 SSLIASL 583



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 186/353 (52%), Gaps = 4/353 (1%)

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +E   E    M+ +GI+  V ++  ++DG  + G    A  L DE+V +G  P+ + Y
Sbjct: 167 GNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITY 226

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ ++      DV G   +LS M    +  +  TY++L +   R+  +++A KL +++L+
Sbjct: 227 NTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLK 286

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  D Y Y  +IN+ CK  N+  A  L   M  R L+P+  TYG LI+G CK G ++ 
Sbjct: 287 KGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 346

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           A  +  +M+      N VI+N++++G CK   +D A  L    Q+ G  +DA T N + +
Sbjct: 347 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 406

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G+  + +  EA  +   M   G+A N V ++ILI+  CK   + +AR L KVM   G  P
Sbjct: 407 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
             VTY   + R+ K    EE  +L ++M   G+ PD  TY ++I    GE+++
Sbjct: 467 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID---GERAS 516



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 211/409 (51%), Gaps = 13/409 (3%)

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
           CF  ++    + G++E  ++  R+M V SG  +   S T   +++G CK G V  A+ + 
Sbjct: 156 CFEFLL-ALKRSGNMELCVEFLRQM-VDSGIEIRVCSWT--AVVDGLCKKGEVVRAKALM 211

Query: 313 YAMIKAGIDCNVRTYATLIDGYAR----GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             ++  G   +V TY TL++GY      GG +E    +   M K  +  N   Y   I W
Sbjct: 212 DELVCKGFKPSVITYNTLLNGYIEIKDVGGVNE----ILSLMEKNVVDYNVTTYTMLIEW 267

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
                 +E A  +  +M+ K I PD + Y+ +    C+ G +K+AF L +++ E  +V +
Sbjct: 268 YSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPN 327

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           AY+Y  LIN  CK+  + AA+ +++ M  +G+  + + + TL+DGYCK G I+ A+++  
Sbjct: 328 AYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQN 387

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M++   + +    N I +G C+    + AK LL   +  G+  + ++++ LI+ Y    
Sbjct: 388 IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQ 447

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
             AEA  +F  M   G A + V YN  I   CK G  ++A +L+  M   G++PD  TYT
Sbjct: 448 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 507

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +L+     + + +  +EL ++M   G++ +  TY  IIS L  +  A++
Sbjct: 508 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADE 556



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 162/332 (48%), Gaps = 3/332 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             +  L+   ++    E A  +  ++  KG    ++ + + ++   K   + R + L+ E
Sbjct: 259 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 318

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M     V N  T+  +I   CK  +++ A  +   M   G+  N V FN +++  C+ G 
Sbjct: 319 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 378

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ AL+L     +M       ++ T N I +GFC+  R E A+ +   M + G+  NV +
Sbjct: 379 IDEALRL---QNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS 435

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           ++ LID Y +  +  EA RL   M K+G  P+ V YN+ I     +G +E A  ++++M 
Sbjct: 436 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 495

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ + PD +TY+ L  G   +G V +A +L N++ +  +  +  +Y ++I+ L K     
Sbjct: 496 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 555

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            A +L   M   G++PD   Y +LI    K G
Sbjct: 556 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 3/240 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F+ L+    + G  + A  +   ++ KG  +     N   S   + N      +L   M
Sbjct: 365 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 424

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV +F+++I   CKE    EA  L+  M K G  P+VV +N  I   C+ G +
Sbjct: 425 EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKM 484

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A KL  +M       ++P++ T+  +I+G    G V+ A E+   M + G++ NV TY
Sbjct: 485 EEAYKLINEM---QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTY 541

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I G ++ G ++EA +L DEM K G++P++ +Y+S I  L   G +   L  + D I+
Sbjct: 542 TVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 601


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 185/657 (28%), Positives = 298/657 (45%), Gaps = 63/657 (9%)

Query: 44  RQRKWKILEQMAPSLTNSLVNRVVSEFRK--SPKLALEFYTWVGENNRFSHSLESSCAIV 101
           R   ++  +Q+   L+    +R+  EFR   +PK AL+F+    ++  FS SL S C ++
Sbjct: 87  RSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLI 146

Query: 102 HLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDSYEICKATPAVFDALVRA----- 155
            LL++      A +++  L++ N  V P    +  +   +   +    FD  +R      
Sbjct: 147 GLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDL 206

Query: 156 -----CTQIGATEGAY---DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
                CTQ    +G Y   DV   L  KG   S    N  L+ LV+ NE  +  + + ++
Sbjct: 207 LIEVYCTQF-KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DV 264

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN-------- 259
           V  G   +V  F   I A CK  K+EEA+ L+ +M ++G+ PNVV FN +I+        
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324

Query: 260 ------------------------------EACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
                                          A ++GD  F LK   K G        PN 
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP------PNV 378

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           + +N +I+ F + G +  A EI+  M+  G+     TY TLI GY + G ++ A RL  E
Sbjct: 379 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 438

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  G   N   + S I  L +    + AL  + +M+ +++ P     + L  GLC++G 
Sbjct: 439 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 498

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +A +L  Q L +  V D  + N L++ LC++  L  A ++   ++ RG + D ++Y T
Sbjct: 499 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 558

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G C    ++ A    + M K   KP+   Y+ +I GL     ++ A       +R G
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 618

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +L D  TY+ +I+G     +  E    F EM +  +  N V YN LI   C+ G    A 
Sbjct: 619 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 678

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           EL + M   GI P+  TYT+L+   S     EE   L ++M + G+ P+   Y A+I
Sbjct: 679 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 234/504 (46%), Gaps = 14/504 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   +  LV+  T+      AY V++++  KG   ++  +NN +   ++   + +  +
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +   MVS G     +T+N +I   CK  + + A  L   ML  G   N   F  +I   C
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                + AL+    +G M   ++ P       +I+G CK G+   A E+ +  +  G   
Sbjct: 460 SHLMFDSALRF---VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 516

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           + RT   L+ G    G  +EA R+  E++ RG + + V YN+ I     +  ++ A   L
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ + + PD++TYSIL  GL     V++A +  +      M+ D Y+Y+++I+  CK+
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                 ++    M+ + + P+ + Y  LI  YC+ G +  A+++ E+MK     PN   Y
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            S+I G+   + ++ AK L +  +  GL  +   Y  LI+GY   G++ +   +  EM +
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 756

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +  NK+ Y ++I    + G   +A  L+  M   GI+PD +TY   +  + K     E
Sbjct: 757 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 816

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
             +            D + Y AII
Sbjct: 817 AFK----------GSDEENYAAII 830



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 185/386 (47%), Gaps = 12/386 (3%)

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           V++   + P+  T N ++    +    +   E  + ++  G+  +V  + T I+ + +GG
Sbjct: 229 VLANKGMFPSKTTCNILLTSLVRANEFQKCCEA-FDVVCKGVSPDVYLFTTAINAFCKGG 287

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             EEA++L  +M + G+ PN V +N+ I  L   G  + A      M+++ + P   TYS
Sbjct: 288 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 347

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL KGL R   +  A+ +  ++ ++    +   YN LI+   ++ +L  A ++   M+ +
Sbjct: 348 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 407

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL     TY TLI GYCK G  + A ++ + M  +    N   + S+I  LC     D+A
Sbjct: 408 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467

Query: 519 KS------LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
                   L   S   GLL      TLI+G   +GK ++A  ++ +  N G  V+    N
Sbjct: 468 LRFVGEMLLRNMSPGGGLL-----TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L++ LC+ G   +A  + K ++  G + D V+Y TL++        +E     D+MV  
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582

Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
           G+ PDN TY+ +I  L      E+ +
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAI 608


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 185/657 (28%), Positives = 298/657 (45%), Gaps = 63/657 (9%)

Query: 44  RQRKWKILEQMAPSLTNSLVNRVVSEFRK--SPKLALEFYTWVGENNRFSHSLESSCAIV 101
           R   ++  +Q+   L+    +R+  EFR   +PK AL+F+    ++  FS SL S C ++
Sbjct: 74  RSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLI 133

Query: 102 HLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDSYEICKATPAVFDALVRA----- 155
            LL++      A +++  L++ N  V P    +  +   +   +    FD  +R      
Sbjct: 134 GLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDL 193

Query: 156 -----CTQIGATEGAY---DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
                CTQ    +G Y   DV   L  KG   S    N  L+ LV+ NE  +  + + ++
Sbjct: 194 LIEVYCTQF-KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DV 251

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN-------- 259
           V  G   +V  F   I A CK  K+EEA+ L+ +M ++G+ PNVV FN +I+        
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311

Query: 260 ------------------------------EACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
                                          A ++GD  F LK   K G        PN 
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP------PNV 365

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           + +N +I+ F + G +  A EI+  M+  G+     TY TLI GY + G ++ A RL  E
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 425

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  G   N   + S I  L +    + AL  + +M+ +++ P     + L  GLC++G 
Sbjct: 426 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +A +L  Q L +  V D  + N L++ LC++  L  A ++   ++ RG + D ++Y T
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G C    ++ A    + M K   KP+   Y+ +I GL     ++ A       +R G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +L D  TY+ +I+G     +  E    F EM +  +  N V YN LI   C+ G    A 
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           EL + M   GI P+  TYT+L+   S     EE   L ++M + G+ P+   Y A+I
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 234/504 (46%), Gaps = 14/504 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   +  LV+  T+      AY V++++  KG   ++  +NN +   ++   + +  +
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +   MVS G     +T+N +I   CK  + + A  L   ML  G   N   F  +I   C
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                + AL+    +G M   ++ P       +I+G CK G+   A E+ +  +  G   
Sbjct: 447 SHLMFDSALRF---VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           + RT   L+ G    G  +EA R+  E++ RG + + V YN+ I     +  ++ A   L
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ + + PD++TYSIL  GL     V++A +  +      M+ D Y+Y+++I+  CK+
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                 ++    M+ + + P+ + Y  LI  YC+ G +  A+++ E+MK     PN   Y
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            S+I G+   + ++ AK L +  +  GL  +   Y  LI+GY   G++ +   +  EM +
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +  NK+ Y ++I    + G   +A  L+  M   GI+PD +TY   +  + K     E
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 803

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
             +            D + Y AII
Sbjct: 804 AFK----------GSDEENYAAII 817



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 185/386 (47%), Gaps = 12/386 (3%)

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           V++   + P+  T N ++    +    +   E  + ++  G+  +V  + T I+ + +GG
Sbjct: 216 VLANKGMFPSKTTCNILLTSLVRANEFQKCCEA-FDVVCKGVSPDVYLFTTAINAFCKGG 274

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             EEA++L  +M + G+ PN V +N+ I  L   G  + A      M+++ + P   TYS
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL KGL R   +  A+ +  ++ ++    +   YN LI+   ++ +L  A ++   M+ +
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL     TY TLI GYCK G  + A ++ + M  +    N   + S+I  LC     D+A
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454

Query: 519 KS------LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
                   L   S   GLL      TLI+G   +GK ++A  ++ +  N G  V+    N
Sbjct: 455 LRFVGEMLLRNMSPGGGLL-----TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L++ LC+ G   +A  + K ++  G + D V+Y TL++        +E     D+MV  
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569

Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
           G+ PDN TY+ +I  L      E+ +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAI 595


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 223/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   +R  +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  YK
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN +IN   ++G
Sbjct: 126 EILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+   K FR    M    V P+  T+  +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLD---KGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + AL +  +M+++G  P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+L  +++EE +  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRA 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+  TY  +I+G+CK G+++ A ++ + M++    P +V
Sbjct: 363 VDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVV 417



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 156/274 (56%), Gaps = 5/274 (1%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TLI+GY R G  ++  RL   M  
Sbjct: 140 NILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHA 199

Query: 353 RGLMPNNVVYNST--IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            G+ P+  VY +T  I+ L  E  ++ A  + ++M+DK + P+  T++ L  G C++G V
Sbjct: 200 SGVHPD--VYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRV 257

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A +++ Q+L +    D  +YN LI  LC+  +L  A+ L+  M ++GL PD ITY TL
Sbjct: 258 DLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTL 317

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDG CK G++E A ++ + M +   + + V Y ++I+GLC++     A+ +L+    +GL
Sbjct: 318 IDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGL 377

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
             +  TY  +ING+   G +  A  +  EM+  G
Sbjct: 378 KPENGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 151/289 (52%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  R G
Sbjct: 126 EILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L   +    +  D Y+  +LIN LCK + +  A +L + M+ +GL+P+ +T+ 
Sbjct: 186 DLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A+++Y+ M +    P+L+ YN++I GLC+   L  A+ L+      
Sbjct: 246 TLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMK 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF +   M    I ++ V Y  LI+ LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ P+  TYT ++  F K    +   +L  +M   G  P
Sbjct: 366 EKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 156/295 (52%), Gaps = 7/295 (2%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ I+     GD
Sbjct: 127 ILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGD 186

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + + M    + PD +T ++L  GLC+   + +A +L N++L++ +V +  ++  
Sbjct: 187 LDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTT 246

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CKS  +  A ++   M+ +G  PD+ITY TLI G C+ G+++ A  +   M    
Sbjct: 247 LIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKG 306

Query: 495 KKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
            KP+ + Y ++I+G CK+  L+ A    K +++ S R   LD + Y  LI+G    G+  
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIR---LDDVAYTALISGLCQEGRAV 363

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +A  M  EM +VG+      Y ++IN  CK G  + A +L+K M   G +P  VT
Sbjct: 364 DAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+GY + G+++   ++   M      P++     +INGLCK++ +D A  L       GL
Sbjct: 178 INGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  +G++  A  ++ +M   G + + + YN LI  LC+ G  +QAR+
Sbjct: 238 VPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   EL   M+   +  D+  Y A+IS L 
Sbjct: 298 LIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  A D
Sbjct: 358 QEGRAVD 364



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N LIN   +  +L    +L ++
Sbjct: 137 YFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ T   LI+G CK   ++ A +++  M      PN V + ++I+G CK   
Sbjct: 197 MHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGR 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +   R G   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 VDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A EL K MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + P+N TY  II+
Sbjct: 377 LKPENGTYTMIIN 389


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 185/657 (28%), Positives = 298/657 (45%), Gaps = 63/657 (9%)

Query: 44  RQRKWKILEQMAPSLTNSLVNRVVSEFRK--SPKLALEFYTWVGENNRFSHSLESSCAIV 101
           R   ++  +Q+   L+    +R+  EFR   +PK AL+F+    ++  FS SL S C ++
Sbjct: 63  RSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLI 122

Query: 102 HLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDSYEICKATPAVFDALVRA----- 155
            LL++      A +++  L++ N  V P    +  +   +   +    FD  +R      
Sbjct: 123 GLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDL 182

Query: 156 -----CTQIGATEGAY---DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
                CTQ    +G Y   DV   L  KG   S    N  L+ LV+ NE  +  + + ++
Sbjct: 183 LIEVYCTQF-KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DV 240

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN-------- 259
           V  G   +V  F   I A CK  K+EEA+ L+ +M ++G+ PNVV FN +I+        
Sbjct: 241 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 300

Query: 260 ------------------------------EACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
                                          A ++GD  F LK   K G        PN 
Sbjct: 301 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP------PNV 354

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           + +N +I+ F + G +  A EI+  M+  G+     TY TLI GY + G ++ A RL  E
Sbjct: 355 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 414

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  G   N   + S I  L +    + AL  + +M+ +++ P     + L  GLC++G 
Sbjct: 415 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 474

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +A +L  Q L +  V D  + N L++ LC++  L  A ++   ++ RG + D ++Y T
Sbjct: 475 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 534

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G C    ++ A    + M K   KP+   Y+ +I GL     ++ A       +R G
Sbjct: 535 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 594

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +L D  TY+ +I+G     +  E    F EM +  +  N V YN LI   C+ G    A 
Sbjct: 595 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 654

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           EL + M   GI P+  TYT+L+   S     EE   L ++M + G+ P+   Y A+I
Sbjct: 655 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 711



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 234/504 (46%), Gaps = 14/504 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   +  LV+  T+      AY V++++  KG   ++  +NN +   ++   + +  +
Sbjct: 316 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 375

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +   MVS G     +T+N +I   CK  + + A  L   ML  G   N   F  +I   C
Sbjct: 376 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 435

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                + AL+    +G M   ++ P       +I+G CK G+   A E+ +  +  G   
Sbjct: 436 SHLMFDSALRF---VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 492

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           + RT   L+ G    G  +EA R+  E++ RG + + V YN+ I     +  ++ A   L
Sbjct: 493 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 552

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ + + PD++TYSIL  GL     V++A +  +      M+ D Y+Y+++I+  CK+
Sbjct: 553 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 612

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                 ++    M+ + + P+ + Y  LI  YC+ G +  A+++ E+MK     PN   Y
Sbjct: 613 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 672

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            S+I G+   + ++ AK L +  +  GL  +   Y  LI+GY   G++ +   +  EM +
Sbjct: 673 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 732

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +  NK+ Y ++I    + G   +A  L+  M   GI+PD +TY   +  + K     E
Sbjct: 733 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 792

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
             +            D + Y AII
Sbjct: 793 AFK----------GSDEENYAAII 806



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 185/386 (47%), Gaps = 12/386 (3%)

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           V++   + P+  T N ++    +    +   E  + ++  G+  +V  + T I+ + +GG
Sbjct: 205 VLANKGMFPSKTTCNILLTSLVRANEFQKCCEA-FDVVCKGVSPDVYLFTTAINAFCKGG 263

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             EEA++L  +M + G+ PN V +N+ I  L   G  + A      M+++ + P   TYS
Sbjct: 264 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 323

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL KGL R   +  A+ +  ++ ++    +   YN LI+   ++ +L  A ++   M+ +
Sbjct: 324 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 383

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL     TY TLI GYCK G  + A ++ + M  +    N   + S+I  LC     D+A
Sbjct: 384 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 443

Query: 519 KS------LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
                   L   S   GLL      TLI+G   +GK ++A  ++ +  N G  V+    N
Sbjct: 444 LRFVGEMLLRNMSPGGGLL-----TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L++ LC+ G   +A  + K ++  G + D V+Y TL++        +E     D+MV  
Sbjct: 499 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558

Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
           G+ PDN TY+ +I  L      E+ +
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAI 584


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 285/574 (49%), Gaps = 18/574 (3%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKLA----LEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           +  PSL ++  +RV+      P L     L F+ ++ +N      L +   +   L   R
Sbjct: 23  KTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRAR 82

Query: 109 RFDDALLLMGNLMS--ANSVSPLEFLEGLLDSYEICKATPAVF----DALVRACTQIGAT 162
           +F +    M N++    N  +    +E ++ S       P++     D L R        
Sbjct: 83  KFAE----MKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMF 138

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + + +V    + KG  +   +   FL  L +   +    +  ++MV  G    V ++  V
Sbjct: 139 DSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAV 198

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           +  LCK+ ++  A +L   ++  G  P+V+ +N ++N   ++ D+    ++   + +M  
Sbjct: 199 VDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEI---LSLMEK 255

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           + V  N  T+  +I  + +  ++E AE++   M+K GI+ +V  Y ++I+   + G+ + 
Sbjct: 256 NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKR 315

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A  L DEM +R L+PN   Y + I+     G+++ A  +++DM  K +  +   ++ L  
Sbjct: 316 AFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMD 375

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ G + +A +L N + ++    DA++ NI+ +  C+SN    AK+LL +M  RG+ P
Sbjct: 376 GYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAP 435

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +++++  LID YCK  N   A ++++ M+K  K P++V YN+ I   CK   ++ A  L+
Sbjct: 436 NVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLI 495

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              Q  GL+ D  TY +LI+G   +G +  A  +F+EM  +G+  N V Y ++I+ L K 
Sbjct: 496 NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKD 555

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           G   +A +L   M   GI+PD   Y++L+    K
Sbjct: 556 GRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 221/427 (51%), Gaps = 4/427 (0%)

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           + AL +   +E  +    +M+ SGI   V  +  +++  C+ G++  A  L   M  +  
Sbjct: 164 LLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKAL---MDELVC 220

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               P+ +T+N ++NG+ ++  V    EI   M K  +D NV TY  LI+ Y+R    EE
Sbjct: 221 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 280

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A +L DEM+K+G+ P+  +Y S I+W    G+++ A  +  +M ++ + P+ +TY  L  
Sbjct: 281 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 340

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ G +K A  + N +  + +  +   +N L++  CK   +  A +L + M  +G   
Sbjct: 341 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 400

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D  T   +  G+C+    E A ++   M++    PN+V ++ +I+  CK+ +   A+ L 
Sbjct: 401 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLF 460

Query: 523 QASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  ++ G   ++ TYN  I  Y   GK+ EA+ + +EM+  G+  +   Y  LI+     
Sbjct: 461 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERAS 520

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +A EL   M   G+  + VTYT +++  SK+   +E  +L+D+M   G+ PD+  Y
Sbjct: 521 GNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIY 580

Query: 642 NAIISPL 648
           +++I+ L
Sbjct: 581 SSLIASL 587



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 186/353 (52%), Gaps = 4/353 (1%)

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +E   E    M+ +GI+  V ++  ++DG  + G    A  L DE+V +G  P+ + Y
Sbjct: 171 GNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITY 230

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ ++      DV G   +LS M    +  +  TY++L +   R+  +++A KL +++L+
Sbjct: 231 NTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLK 290

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  D Y Y  +IN+ CK  N+  A  L   M  R L+P+  TYG LI+G CK G ++ 
Sbjct: 291 KGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKA 350

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           A  +  +M+      N VI+N++++G CK   +D A  L    Q+ G  +DA T N + +
Sbjct: 351 AEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 410

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G+  + +  EA  +   M   G+A N V ++ILI+  CK   + +AR L KVM   G  P
Sbjct: 411 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
             VTY   + R+ K    EE  +L ++M   G+ PD  TY ++I    GE+++
Sbjct: 471 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID---GERAS 520



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 211/409 (51%), Gaps = 13/409 (3%)

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
           CF  ++    + G++E  ++  R+M V SG  +   S T   +++G CK G V  A+ + 
Sbjct: 160 CFEFLL-ALKRSGNMELCVEFLRQM-VDSGIEIRVCSWT--AVVDGLCKKGEVVRAKALM 215

Query: 313 YAMIKAGIDCNVRTYATLIDGYAR----GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             ++  G   +V TY TL++GY      GG +E    +   M K  +  N   Y   I W
Sbjct: 216 DELVCKGFKPSVITYNTLLNGYIEIKDVGGVNE----ILSLMEKNVVDYNVTTYTMLIEW 271

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
                 +E A  +  +M+ K I PD + Y+ +    C+ G +K+AF L +++ E  +V +
Sbjct: 272 YSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPN 331

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           AY+Y  LIN  CK+  + AA+ +++ M  +G+  + + + TL+DGYCK G I+ A+++  
Sbjct: 332 AYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQN 391

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M++   + +    N I +G C+    + AK LL   +  G+  + ++++ LI+ Y    
Sbjct: 392 IMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQ 451

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
             AEA  +F  M   G A + V YN  I   CK G  ++A +L+  M   G++PD  TYT
Sbjct: 452 NFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYT 511

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +L+     + + +  +EL ++M   G++ +  TY  IIS L  +  A++
Sbjct: 512 SLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADE 560



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 162/332 (48%), Gaps = 3/332 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             +  L+   ++    E A  +  ++  KG    ++ + + ++   K   + R + L+ E
Sbjct: 263 TTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDE 322

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M     V N  T+  +I   CK  +++ A  +   M   G+  N V FN +++  C+ G 
Sbjct: 323 MTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGM 382

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ AL+L     +M       ++ T N I +GFC+  R E A+ +   M + G+  NV +
Sbjct: 383 IDEALRL---QNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS 439

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           ++ LID Y +  +  EA RL   M K+G  P+ V YN+ I     +G +E A  ++++M 
Sbjct: 440 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 499

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ + PD +TY+ L  G   +G V +A +L N++ +  +  +  +Y ++I+ L K     
Sbjct: 500 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 559

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            A +L   M   G++PD   Y +LI    K G
Sbjct: 560 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 119/240 (49%), Gaps = 3/240 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F+ L+    + G  + A  +   ++ KG  +     N   S   + N      +L   M
Sbjct: 369 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 428

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   NV +F+++I   CKE    EA  L+  M K G  P+VV +N  I   C+ G +
Sbjct: 429 EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKM 488

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A KL  +M       ++P++ T+  +I+G    G V+ A E+   M + G++ NV TY
Sbjct: 489 EEAYKLINEM---QERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTY 545

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I G ++ G ++EA +L DEM K G++P++ +Y+S I  L   G +   L  + D I+
Sbjct: 546 TVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRIE 605


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 245/503 (48%), Gaps = 4/503 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  L+ + T++        +  ++   G   +I+  N  ++    L  +G  + +  +
Sbjct: 60  ADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAK 119

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           ++  G+  N+ TFN +I  LC E K+ E L L+ +M+  G  PNVV +  +IN  C+VG 
Sbjct: 120 ILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGS 179

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A++L R    M   +  P+ V +  II+  CK  +V  A  +   MI  GI  ++ T
Sbjct: 180 TSAAIRLLRS---MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LI         +    L +EMV   +MPN V++++ +  L  EG V  A  V+  MI
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + + P+  TY+ L  G C    + +A K+ + ++ +    D  SY+ LIN  CK   + 
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L   M  + LIP+ +TY TL+ G C  G ++ A+ ++  M    + P+ V Y  ++
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LCK+  LD A +LL+A +   +  D   Y  +I+G    G++  A  +FS + + G+ 
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   Y I+IN LC+ G   +A +L   M   G  P+  TY  +   F +N      I+L
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 536

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
             +M+  G S D  T   ++  L
Sbjct: 537 LQEMLARGFSADVSTSTVLVEML 559



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 236/471 (50%), Gaps = 4/471 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +   L  + K+        L  +M S G   N+ T N++I + C   +L  A S+ 
Sbjct: 58  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 117

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            ++LK G  PN+  FN +I   C  G +   L LF K   M G+   PN VT+  +ING 
Sbjct: 118 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK---MIGEGFQPNVVTYGTLINGL 174

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A  +  +M +     +V  Y ++ID   +     +A  L  EM+ +G+ P+ 
Sbjct: 175 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 234

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS IH L    + +    +L++M++  I P+   +S +   LC+ G V +A  + + 
Sbjct: 235 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 294

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +++  +  +  +YN L++  C  + +  A ++  +M+ +G  PD+++Y TLI+GYCK   
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNT 538
           IE A+ ++E M + E  PN V Y+++++GLC    L  A +L  +   R  + D ++Y  
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++    N ++ EA A+   +    +  +   Y I+I+ +C+ G  + AR+L   +   G
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + P+  TYT ++    +     E  +L  +M   G SP+  TYN I    L
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 525



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 4/446 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F+ L+R     G       +  K+  +G   ++  +   ++ L K+       +L + 
Sbjct: 130 ATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRS 189

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V  +  +I +LCK+ ++ +A +L+  M+  GI P++  +N +I+  C + +
Sbjct: 190 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 249

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L  +M       ++PN V  + +++  CK G+V  A ++   MIK G++ NV T
Sbjct: 250 WKHVTALLNEM---VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 306

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      +EA+++ D MV +G  P+ V Y++ I+       +E A+++  +M 
Sbjct: 307 YNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMC 366

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K + P+  TYS L  GLC  G ++ A  L ++++    + D  SY IL++YLCK+  L 
Sbjct: 367 RKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLD 426

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL ++    + PDI  Y  +IDG C+ G +E A  ++ N+      PN+  Y  +I
Sbjct: 427 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 486

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLC+   L  A  L    +R G   +  TYN +  G+  N +      +  EM   G +
Sbjct: 487 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 546

Query: 566 VNKVGYNILINFLCKFGCYQQARELM 591
            +     +L+  L   G  Q  ++++
Sbjct: 547 ADVSTSTVLVEMLSDDGLDQSVKQIL 572



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 232/467 (49%), Gaps = 4/467 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           + N F S  +  N +      +  M+      ++  F  ++ ++ K       LSL ++M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              GI PN+   N++IN  C +  L FA  +  K+  +      PN  T N +I G C  
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQ---PNIATFNTLIRGLCVE 142

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G++     +   MI  G   NV TY TLI+G  + GS+  A+RL   M +    P+ VVY
Sbjct: 143 GKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY 202

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            S I  L  +  V  A  + S+MI + I P  FTY+ L   LC     K    L N+++ 
Sbjct: 203 TSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVN 262

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +   ++ +++ LCK   +  A  ++  MI RG+ P+++TY  L+DG+C    ++ 
Sbjct: 263 SKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 322

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           AV+V++ M      P++V Y+++ING CK   ++ A  L +   R  L+ + +TY+TL++
Sbjct: 323 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 382

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    G++ +A A+F EM   G   + V Y IL+++LCK     +A  L+K +    + P
Sbjct: 383 GLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP 442

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D   YT ++    +    E   +L  ++   G+ P+  TY  +I+ L
Sbjct: 443 DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 185/349 (53%), Gaps = 3/349 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+    V+ +++ +  +      A+++  ++  +G S SI  +N+ +  L  L E     
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 254

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EMV+   + NV  F+ V+ ALCKE K+ EA  +   M+K G+ PNVV +N +++  
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 314

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C   +++ A+K+F  M V  G +  P+ V+++ +ING+CK+ R+E A  +   M +  + 
Sbjct: 315 CLRSEMDEAVKVFDTM-VCKGFA--PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 371

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY+TL+ G    G  ++A+ L  EMV RG +P+ V Y   + +L     ++ A+ +
Sbjct: 372 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 431

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  +   ++ PD   Y+I+  G+CR G ++ A  L + +  + +  + ++Y I+IN LC+
Sbjct: 432 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 491

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
              LA A +L   M  +G  P+  TY  +  G+ +       +Q+ + M
Sbjct: 492 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 154/309 (49%), Gaps = 3/309 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  +V A  + G    A+DV+  +  +G   ++  +N  +      +E+    K++  M
Sbjct: 271 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+  +V +++ +I   CK  ++E+A+ L+  M +  + PN V ++ +++  C VG L
Sbjct: 331 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 390

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ LF +M V  G   +P+ V++  +++  CK  R++ A  +  A+  + +D +++ Y
Sbjct: 391 QDAIALFHEM-VTRGQ--IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +IDG  R G  E A  L   +  +GL PN   Y   I+ L  +G +  A  +  +M  
Sbjct: 448 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 507

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  TY+++T+G  RN    +  +L  ++L      D  +  +L+  L       +
Sbjct: 508 KGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQS 567

Query: 448 AKQLLSSMI 456
            KQ+LS  +
Sbjct: 568 VKQILSEFL 576



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 1/316 (0%)

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           L L  +M   G+ PN    N  I+       +  A  VL+ ++     P+  T++ L +G
Sbjct: 79  LSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 138

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC  G + +   L ++++ E    +  +Y  LIN LCK  + +AA +LL SM      PD
Sbjct: 139 LCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPD 198

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++ Y ++ID  CK   +  A  ++  M      P++  YNS+I+ LC         +LL 
Sbjct: 199 VVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 258

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                 ++ + + ++T+++     GK+ EA  +   M   G+  N V YN L++  C   
Sbjct: 259 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 318

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A ++   M+  G  PD V+Y+TL+  + K    E+ + L ++M    + P+  TY+
Sbjct: 319 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378

Query: 643 AIISPLLGEKSAEDQV 658
            ++  L      +D +
Sbjct: 379 TLMHGLCHVGRLQDAI 394



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 150/314 (47%), Gaps = 14/314 (4%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DAL   G +M A+ V  +    G+       +     ++AL+         + A  V   
Sbjct: 277 DALCKEGKVMEAHDVVDMMIKRGV-------EPNVVTYNALMDGHCLRSEMDEAVKVFDT 329

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +  KG +  + +++  ++   K+  I +   L++EM     + N  T++ +++ LC   +
Sbjct: 330 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 389

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++A++L++ M+  G  P+ V + ++++  C+   L+ A+ L +    + G ++ P+   
Sbjct: 390 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK---AIEGSNMDPDIQI 446

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +I+G C+ G +E A ++   +   G+  NV TY  +I+G  + G   EA +L  EM 
Sbjct: 447 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++G  PN   YN          +    + +L +M+ +    D  T ++L + L  +G + 
Sbjct: 507 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LD 565

Query: 412 QAFKLHNQVLEEHM 425
           Q+ K   Q+L E +
Sbjct: 566 QSVK---QILSEFL 576



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 6/265 (2%)

Query: 392 PDHFTYS----ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           P HF  S      +K L  N  +  A    N++L  H       +  L+  + K  + + 
Sbjct: 19  PPHFLSSSHNTFHSKSLNFN-TLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYST 77

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              L   M   G+ P+I T   LI+ +C    +  A  V   + K+  +PN+  +N++I 
Sbjct: 78  VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIR 137

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC +  +     L       G   + +TY TLING    G  + A  +   M       
Sbjct: 138 GLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQP 197

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V Y  +I+ LCK     QA  L   MI  GI P   TY +L+      C  + V  L 
Sbjct: 198 DVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL 257

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGE 651
           ++MV S + P+   ++ ++  L  E
Sbjct: 258 NEMVNSKIMPNVVIFSTVVDALCKE 282



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 17/156 (10%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA 155
           S C ++  L   RR D+A+ L+  +  +N       ++  +  Y I      V D + RA
Sbjct: 411 SYCILLDYLCKNRRLDEAIALLKAIEGSN-------MDPDIQIYTI------VIDGMCRA 457

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
               G  E A D+   L  KG   ++  +   ++ L +   +    KL+ EM   GY  N
Sbjct: 458 ----GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
             T+NL+     +  +    + L   ML  G   +V
Sbjct: 514 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 549


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/507 (30%), Positives = 245/507 (48%), Gaps = 39/507 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  ++   S + +  E        KEM   G   N+ T N++I   C++ KL  A S+ 
Sbjct: 68  SLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVV 127

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            R LK G  PN + F+ +IN  C  G +  A+ L  +M  M      PN VT N +ING 
Sbjct: 128 GRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK---YRPNVVTVNTLINGL 184

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C  GRV  A  +   M+K G + N  TY  +++   + G++  AL L  +M +R +  + 
Sbjct: 185 CLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASV 244

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V Y+  I  L  +G+++ AL + ++M  K I  D   YS +  GLC +G      K+  +
Sbjct: 245 VQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++  +++ +  +++ LI+   K   L  AK+L + M+ RG+ PD ITY +LIDG+CK   
Sbjct: 305 MIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENR 364

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           +  A Q+ + M     +PN+V Y+ +IN  CK   +D    L       GL+ D +TYNT
Sbjct: 365 LGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNT 424

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM---- 594
           L+ G+  +GK+  A  +F EM + G+  + V Y IL++ LC  G  Q+A E+ + M    
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484

Query: 595 ----------ILH---------------------GIIPDYVTYTTLVTRFSKNCSPEEVI 623
                     I+H                     G+ PD +TY  ++    K  S  E  
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEAD 544

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLG 650
            L   M   G +P + TYN +I   LG
Sbjct: 545 MLFRKMKEDGCAPSDCTYNILIRAHLG 571



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 230/467 (49%), Gaps = 4/467 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+      G    A  ++ ++    +  ++   N  ++ L     +     L   MV
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   N  T+  V+  +CK      AL L+ +M +  I  +VV ++++I+  C+ G+L+
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL LF +M  M G  +  + V ++ II G C  GR +   ++   MI   I  NV T++
Sbjct: 262 DALSLFNEME-MKG--IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFS 318

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LID + + G   EA  L +EMV RG+ P+ + Y+S I     E  +  A  +L  M+ K
Sbjct: 319 ALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSK 378

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P+  TYSIL    C+   V    +L  ++  + +V D  +YN L+   C+S  L  A
Sbjct: 379 GCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVA 438

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K+L   M+ RG+ P ++TYG L+DG C  G ++ A++++E M+K      + IYN II+G
Sbjct: 439 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHG 498

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +C  + +D A SL  +    G+  D +TYN +I G    G ++EA  +F +M+  G A +
Sbjct: 499 MCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
              YNILI           + EL++ M + G   D  T   +V   S
Sbjct: 559 DCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLS 605



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 227/447 (50%), Gaps = 4/447 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L   MV   Y  NV T N +I  LC + ++ EAL L  RM+K G   N + +  ++N  C
Sbjct: 161 LVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMC 220

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+   AL LFRKM      S+  + V ++ +I+  CK G ++ A  +   M   GI  
Sbjct: 221 KSGNTALALDLFRKM---EERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKA 277

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V  Y+++I G    G  ++  ++  EM+ R ++PN V +++ I     EG +  A  + 
Sbjct: 278 DVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELY 337

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M+ + I PD  TYS L  G C+   + +A ++ + ++ +    +  +Y+ILIN  CK+
Sbjct: 338 NEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA 397

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +    +L   +  +GL+ D +TY TL+ G+C+ G +  A ++++ M      P++V Y
Sbjct: 398 KRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
             +++GLC +  L  A  + +  Q+  ++  I  YN +I+G     K+ +A+++F  +  
Sbjct: 458 GILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV 517

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  + + YN++I  LCK G   +A  L + M   G  P   TY  L+           
Sbjct: 518 KGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVIS 577

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
            +EL ++M + G + D  T   ++  L
Sbjct: 578 SVELIEEMKMRGFAADASTIKMVVVML 604



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 222/466 (47%), Gaps = 7/466 (1%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           +K+NE      L++ M+    + ++  F+ +  A+ +  + +  L     M  +GI  N+
Sbjct: 48  IKVNEA---IDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNM 104

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
              N++IN  C+   L FA   F  +G        PN++T + +INGFC  GRV  A  +
Sbjct: 105 YTMNIMINCFCRKRKLLFA---FSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVAL 161

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M++     NV T  TLI+G    G   EAL L D MVK G   N + Y   ++ +  
Sbjct: 162 VDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCK 221

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G+   AL +   M ++ I      YSI+   LC++G +  A  L N++  + +  D  +
Sbjct: 222 SGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVA 281

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+ +I  LC         ++L  MI R +IP+++T+  LID + K G +  A ++Y  M 
Sbjct: 282 YSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
                P+ + Y+S+I+G CK+  L  A  +L      G   + +TY+ LIN Y    ++ 
Sbjct: 342 ARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVD 401

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
               +F E+ + G+  + V YN L+   C+ G    A+EL + M+  G+ P  VTY  L+
Sbjct: 402 NGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILL 461

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                N   ++ +E+ + M  S +      YN II  +      +D
Sbjct: 462 DGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDD 507



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 209/412 (50%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+A    +  ++    + G T  A D+ +K++ +    S+  ++  +  L K   +    
Sbjct: 205 CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL 264

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM   G   +V  ++ +I  LC + + ++   +   M+   I PNVV F+ +I+  
Sbjct: 265 SLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A +L+ +M V  G  + P+++T++ +I+GFCK  R+  A ++   M+  G +
Sbjct: 325 VKEGKLLEAKELYNEM-VARG--IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCE 381

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+ TY+ LI+ Y +    +  +RL  E+  +GL+ + V YN+ +      G +  A  +
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ + + P   TY IL  GLC NG +++A ++  ++ +  M+     YNI+I+ +C 
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCN 501

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           ++ +  A  L  S+ V+G+ PD++TY  +I G CK G++  A  ++  MK+    P+   
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT 561

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN +I      + + ++  L++  +  G     +   ++     +G++ + F
Sbjct: 562 YNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGRLDKTF 613


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 216/405 (53%), Gaps = 9/405 (2%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P VV + +II+  C+   L+ AL  F KM     + V PN  T+N ++NG CK      A
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKM----REFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 309 EEIRYAMIKA-GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTI 366
            E+   M     +  ++ TY+T+I+G+ + G  + A  +  EMV R G+ P+ V Y S +
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL-EEHM 425
             L  +G ++ A  ++ +M  K + PD FT+S L  G C    V +A KL+ ++L     
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +Y  LI+  CKS NL  A ++L  M  R  +P+++TY +L+ G CK G+++ A+ 
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYF 544
           ++  M      PN+V Y ++I+GLC    +DAA+ L+ + +      D ++YN L++GY 
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-ILHGIIPDY 603
             G+I EA  +F EM       +++ Y  L+   C     ++AR L++ M    GI PD 
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           VTY+ +V  +S+     E  E   +M+   V+P+  TY+++I  L
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 236/470 (50%), Gaps = 7/470 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++  W   +    K N++ +    +++M       N  T+N+V+  LCK     +A  + 
Sbjct: 6   TVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAYEVL 64

Query: 240 YRMLKS-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             M     + P++V ++ +IN  C+ G+++ A ++ R+M  ++ D + P+ VT+  +++G
Sbjct: 65  KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM--VTRDGIAPDVVTYTSVVDG 122

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE-MVKRGLMP 357
            C+ G+++ A E+   M   G++ +  T++ LI G+      +EAL+L  E +      P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           + V Y + I      G++E A+ +L  M  +   P+  TYS L  GLC+ G + QA  L 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++  +  V +  +Y  LI+ LC ++ + AA+ L+  M      PD ++Y  L+DGYC+ 
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA--IT 535
           G IE A Q+++ M      P+ + Y  ++ G C  + L+ A+ LL+  +    +D   +T
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y+ ++ GY    +  EA     EM    +A N V Y+ LI+ LCK G    A E++K M+
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              + P   T+ +++    +    +E  +L   M   G+ P   TY  ++
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 228/450 (50%), Gaps = 21/450 (4%)

Query: 156 CTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           C Q G  + A ++++++  + G +  +  + + +  L +  ++ R  ++ +EM   G   
Sbjct: 88  CKQ-GEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP 146

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEACQVGDLEFALKL 273
           +  TF+ +I   C   K++EAL LY  +L S  W P+VV +  +I+  C+ G+LE A+K+
Sbjct: 147 DKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKM 206

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
              +GVM G   +PN VT++ +++G CK G ++ A ++   M   G   NV TY TLI G
Sbjct: 207 ---LGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG 263

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
                  + A  L DEM      P+ V YN+ +      G +E A  +  +M  K   PD
Sbjct: 264 LCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPD 323

Query: 394 HFTYSILTKGLCRNGCVKQA-FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
             TY+ L +G C    +++A F L N      +  D  +Y+I++    ++     A + +
Sbjct: 324 RITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFI 383

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             MI R + P+ +TY +LIDG CK G ++ A++V +NM     +P++  +NS+I  LC+ 
Sbjct: 384 QEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRL 443

Query: 513 ASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIA------ 565
             +D A  LL A    GL    +TY TL+ G+   G++  A+ +F  MR           
Sbjct: 444 GDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAAN 503

Query: 566 -VNKVGYNILINFLCKFGCYQQARELMKVM 594
            V +  ++ LI  LCK      ARE+ K M
Sbjct: 504 LVPEQAFSALIRGLCK------AREIDKAM 527



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 233/453 (51%), Gaps = 8/453 (1%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV-ENVNTFNLVIYALCKECKLEEALSLYY 240
             +N  ++ L K     + +++ KEM     V  ++ T++ VI   CK+ +++ A  +  
Sbjct: 42  RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 101

Query: 241 RML-KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            M+ + GI P+VV +  +++  C+ G ++ A ++ R+M +     V P+  T + +I G+
Sbjct: 102 EMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKL---KGVEPDKFTFSALITGW 158

Query: 300 CKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           C   +V+ A ++ +  +  +    +V TY  LIDG+ + G+ E+A+++   M  R  +PN
Sbjct: 159 CNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPN 218

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V Y+S +H L   GD++ AL +   M  K   P+  TY+ L  GLC    V  A  L +
Sbjct: 219 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 278

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++       D  SYN L++  C+   +  AKQL   M  +  +PD ITY  L+ G+C   
Sbjct: 279 EMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNAS 338

Query: 479 NIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDAS-LDAAKSLLQASQRIGLLDAITY 536
            +E A  + ENMK      P++V Y+ ++ G  +    ++AA+ + +   R    +A+TY
Sbjct: 339 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           ++LI+G    G++  A  +   M N  +  +   +N +I  LC+ G   +A +L+  M  
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           HG+ P  VTYTTL+  FS+    E   EL + M
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 491



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 232/438 (52%), Gaps = 7/438 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
            V T+ ++I   CK  +L++AL+ + +M +  + PN   +N+++N  C+      A ++ 
Sbjct: 6   TVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEVL 64

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDG 333
           ++M    G SV P+ VT++ +INGFCK G ++ A EI   M+ + GI  +V TY +++DG
Sbjct: 65  KEM--RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-P 392
             R G  + A  +  EM  +G+ P+   +++ I        V+ AL +  +++      P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TY+ L  G C++G +++A K+   +     V +  +Y+ L++ LCK+ +L  A  L 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M  +G +P+++TY TLI G C    ++ A  + + M      P+ V YN++++G C+ 
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 513 ASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV-GIAVNKVG 570
             ++ AK L  + + +  L D ITY  L+ G+    ++ EA  +   M+   GI  + V 
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y+I++    +   + +A E ++ MI   + P+ VTY++L+    K    +  +E+  +MV
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422

Query: 631 LSGVSPDNQTYNAIISPL 648
              V P   T+N++I  L
Sbjct: 423 NKRVEPSVGTFNSVIGAL 440



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 219/454 (48%), Gaps = 34/454 (7%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           E ++F+ S     A++    N R+ D+AL L   +++++S  P                 
Sbjct: 145 EPDKFTFS-----ALITGWCNARKVDEALKLYKEILTSSSWKP----------------D 183

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
              + AL+    + G  E A  ++  ++ +    ++  +++ L  L K  ++ +   L++
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            M S G V NV T+  +I+ LC   K++ A  L   M  +   P+ V +N +++  C++G
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM-IKAGIDCNV 324
            +E A +LF++M      S LP+ +T+ C++ GFC   R+E A  +   M   AGID +V
Sbjct: 304 RIEEAKQLFKEMAT---KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY+ ++ GY+R     EA     EM+ R + PN V Y+S I  L   G V+ A+ VL +
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M++K + P   T++ +   LCR G + +A+KL   +    +     +Y  L+    ++  
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480

Query: 445 LAAAKQLLSSM--------IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +  A +L   M            L+P+   +  LI G CK   I+ A+ V E ++  E +
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECE 539

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           P      +I++GL +    + A  L+ +  ++GL
Sbjct: 540 PAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 219/464 (47%), Gaps = 54/464 (11%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +V D L R     G  + A ++++++K+KG       ++  ++      ++    KLYKE
Sbjct: 118 SVVDGLCRD----GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKE 173

Query: 207 -MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            + S  +  +V T+  +I   CK   LE+A+ +   M      PNVV ++ +++  C+ G
Sbjct: 174 ILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 233

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+ AL LFR+M   +    +PN VT+  +I+G C   +V+ A  +   M       +  
Sbjct: 234 DLDQALDLFRRM---TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV 290

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL--- 382
           +Y  L+DGY R G  EEA +L  EM  +  +P+ + Y   +        +E A F+L   
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 383 ---------------------------------SDMIDKHICPDHFTYSILTKGLCRNGC 409
                                             +MI +++ P+  TYS L  GLC+ G 
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A ++   ++ + +     ++N +I  LC+  ++  A +LL +M   GL P ++TY T
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470

Query: 470 LIDGYCKGGNIEGAVQVYENMK----KVEKKPNLV---IYNSIINGLCKDASLDAAKSLL 522
           L++G+ + G +E A +++E M+    K     NLV    ++++I GLCK   +D A +++
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 530

Query: 523 QASQRIGLLDAITYNTL--INGYFINGKIAEAFAMFSEMRNVGI 564
           +   R    +    + L  ++G    G+  EA  + + +  VG+
Sbjct: 531 E-ELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 2/156 (1%)

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEA 552
           +E +P +V +  II+G CK   L  A +  +  +     +  TYN ++NG       ++A
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 553 FAMFSEMRN-VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH-GIIPDYVTYTTLV 610
           + +  EMR+   +A + V Y+ +IN  CK G   +A E+++ M+   GI PD VTYT++V
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
               ++   +   E+  +M L GV PD  T++A+I+
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 156


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 245/503 (48%), Gaps = 4/503 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  L+ + T++        +  ++   G   +I+  N  ++    L  +G  + +  +
Sbjct: 69  ADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAK 128

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           ++  G+  N+ TFN +I  LC E K+ E L L+ +M+  G  PNVV +  +IN  C+VG 
Sbjct: 129 ILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGS 188

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A++L R    M   +  P+ V +  II+  CK  +V  A  +   MI  GI  ++ T
Sbjct: 189 TSAAIRLLRS---MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LI         +    L +EMV   +MPN V++++ +  L  EG V  A  V+  MI
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + + P+  TY+ L  G C    + +A K+ + ++ +    D  SY+ LIN  CK   + 
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L   M  + LIP+ +TY TL+ G C  G ++ A+ ++  M    + P+ V Y  ++
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LCK+  LD A +LL+A +   +  D   Y  +I+G    G++  A  +FS + + G+ 
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 485

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   Y I+IN LC+ G   +A +L   M   G  P+  TY  +   F +N      I+L
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 545

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
             +M+  G S D  T   ++  L
Sbjct: 546 LQEMLARGFSADVSTSTVLVEML 568



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 236/471 (50%), Gaps = 4/471 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +   L  + K+        L  +M S G   N+ T N++I + C   +L  A S+ 
Sbjct: 67  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 126

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            ++LK G  PN+  FN +I   C  G +   L LF K   M G+   PN VT+  +ING 
Sbjct: 127 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK---MIGEGFQPNVVTYGTLINGL 183

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G    A  +  +M +     +V  Y ++ID   +     +A  L  EM+ +G+ P+ 
Sbjct: 184 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 243

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS IH L    + +    +L++M++  I P+   +S +   LC+ G V +A  + + 
Sbjct: 244 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 303

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +++  +  +  +YN L++  C  + +  A ++  +M+ +G  PD+++Y TLI+GYCK   
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 363

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNT 538
           IE A+ ++E M + E  PN V Y+++++GLC    L  A +L  +   R  + D ++Y  
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 423

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++    N ++ EA A+   +    +  +   Y I+I+ +C+ G  + AR+L   +   G
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + P+  TYT ++    +     E  +L  +M   G SP+  TYN I    L
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFL 534



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 4/446 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F+ L+R     G       +  K+  +G   ++  +   ++ L K+       +L + 
Sbjct: 139 ATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRS 198

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V  +  +I +LCK+ ++ +A +L+  M+  GI P++  +N +I+  C + +
Sbjct: 199 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 258

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L  +M       ++PN V  + +++  CK G+V  A ++   MIK G++ NV T
Sbjct: 259 WKHVTALLNEM---VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 315

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      +EA+++ D MV +G  P+ V Y++ I+       +E A+++  +M 
Sbjct: 316 YNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMC 375

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K + P+  TYS L  GLC  G ++ A  L ++++    + D  SY IL++YLCK+  L 
Sbjct: 376 RKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLD 435

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL ++    + PDI  Y  +IDG C+ G +E A  ++ N+      PN+  Y  +I
Sbjct: 436 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 495

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLC+   L  A  L    +R G   +  TYN +  G+  N +      +  EM   G +
Sbjct: 496 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 555

Query: 566 VNKVGYNILINFLCKFGCYQQARELM 591
            +     +L+  L   G  Q  ++++
Sbjct: 556 ADVSTSTVLVEMLSDDGLDQSVKQIL 581



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 232/467 (49%), Gaps = 4/467 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           + N F S  +  N +      +  M+      ++  F  ++ ++ K       LSL ++M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              GI PN+   N++IN  C +  L FA  +  K+  +      PN  T N +I G C  
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQ---PNIATFNTLIRGLCVE 151

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G++     +   MI  G   NV TY TLI+G  + GS+  A+RL   M +    P+ VVY
Sbjct: 152 GKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY 211

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            S I  L  +  V  A  + S+MI + I P  FTY+ L   LC     K    L N+++ 
Sbjct: 212 TSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVN 271

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ +   ++ +++ LCK   +  A  ++  MI RG+ P+++TY  L+DG+C    ++ 
Sbjct: 272 SKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDE 331

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           AV+V++ M      P++V Y+++ING CK   ++ A  L +   R  L+ + +TY+TL++
Sbjct: 332 AVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMH 391

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    G++ +A A+F EM   G   + V Y IL+++LCK     +A  L+K +    + P
Sbjct: 392 GLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDP 451

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D   YT ++    +    E   +L  ++   G+ P+  TY  +I+ L
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 185/349 (53%), Gaps = 3/349 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+    V+ +++ +  +      A+++  ++  +G S SI  +N+ +  L  L E     
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 263

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EMV+   + NV  F+ V+ ALCKE K+ EA  +   M+K G+ PNVV +N +++  
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 323

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C   +++ A+K+F  M V  G +  P+ V+++ +ING+CK+ R+E A  +   M +  + 
Sbjct: 324 CLRSEMDEAVKVFDTM-VCKGFA--PDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 380

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY+TL+ G    G  ++A+ L  EMV RG +P+ V Y   + +L     ++ A+ +
Sbjct: 381 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 440

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  +   ++ PD   Y+I+  G+CR G ++ A  L + +  + +  + ++Y I+IN LC+
Sbjct: 441 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 500

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
              LA A +L   M  +G  P+  TY  +  G+ +       +Q+ + M
Sbjct: 501 QGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 154/309 (49%), Gaps = 3/309 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  +V A  + G    A+DV+  +  +G   ++  +N  +      +E+    K++  M
Sbjct: 280 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G+  +V +++ +I   CK  ++E+A+ L+  M +  + PN V ++ +++  C VG L
Sbjct: 340 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 399

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ LF +M V  G   +P+ V++  +++  CK  R++ A  +  A+  + +D +++ Y
Sbjct: 400 QDAIALFHEM-VTRGQ--IPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +IDG  R G  E A  L   +  +GL PN   Y   I+ L  +G +  A  +  +M  
Sbjct: 457 TIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR 516

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  TY+++T+G  RN    +  +L  ++L      D  +  +L+  L       +
Sbjct: 517 KGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQS 576

Query: 448 AKQLLSSMI 456
            KQ+LS  +
Sbjct: 577 VKQILSEFL 585



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 1/316 (0%)

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           L L  +M   G+ PN    N  I+       +  A  VL+ ++     P+  T++ L +G
Sbjct: 88  LSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 147

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC  G + +   L ++++ E    +  +Y  LIN LCK  + +AA +LL SM      PD
Sbjct: 148 LCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPD 207

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++ Y ++ID  CK   +  A  ++  M      P++  YNS+I+ LC         +LL 
Sbjct: 208 VVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 267

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                 ++ + + ++T+++     GK+ EA  +   M   G+  N V YN L++  C   
Sbjct: 268 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 327

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A ++   M+  G  PD V+Y+TL+  + K    E+ + L ++M    + P+  TY+
Sbjct: 328 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387

Query: 643 AIISPLLGEKSAEDQV 658
            ++  L      +D +
Sbjct: 388 TLMHGLCHVGRLQDAI 403



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 150/314 (47%), Gaps = 14/314 (4%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DAL   G +M A+ V  +    G+       +     ++AL+         + A  V   
Sbjct: 286 DALCKEGKVMEAHDVVDMMIKRGV-------EPNVVTYNALMDGHCLRSEMDEAVKVFDT 338

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +  KG +  + +++  ++   K+  I +   L++EM     + N  T++ +++ LC   +
Sbjct: 339 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 398

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++A++L++ M+  G  P+ V + ++++  C+   L+ A+ L +    + G ++ P+   
Sbjct: 399 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK---AIEGSNMDPDIQI 455

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +I+G C+ G +E A ++   +   G+  NV TY  +I+G  + G   EA +L  EM 
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++G  PN   YN          +    + +L +M+ +    D  T ++L + L  +G + 
Sbjct: 516 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LD 574

Query: 412 QAFKLHNQVLEEHM 425
           Q+ K   Q+L E +
Sbjct: 575 QSVK---QILSEFL 585



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 6/265 (2%)

Query: 392 PDHFTYS----ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           P HF  S      +K L  N  +  A    N++L  H       +  L+  + K  + + 
Sbjct: 28  PPHFLSSSHNTFHSKSLNFN-TLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYST 86

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              L   M   G+ P+I T   LI+ +C    +  A  V   + K+  +PN+  +N++I 
Sbjct: 87  VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIR 146

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC +  +     L       G   + +TY TLING    G  + A  +   M       
Sbjct: 147 GLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQP 206

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V Y  +I+ LCK     QA  L   MI  GI P   TY +L+      C  + V  L 
Sbjct: 207 DVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALL 266

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGE 651
           ++MV S + P+   ++ ++  L  E
Sbjct: 267 NEMVNSKIMPNVVIFSTVVDALCKE 291



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 17/156 (10%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA 155
           S C ++  L   RR D+A+ L+  +  +N       ++  +  Y I      V D + RA
Sbjct: 420 SYCILLDYLCKNRRLDEAIALLKAIEGSN-------MDPDIQIYTI------VIDGMCRA 466

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
               G  E A D+   L  KG   ++  +   ++ L +   +    KL+ EM   GY  N
Sbjct: 467 ----GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
             T+NL+     +  +    + L   ML  G   +V
Sbjct: 523 GCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADV 558


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 257/520 (49%), Gaps = 39/520 (7%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A  V+ +++ +G  ++   +N  ++ L +   +   +   K+M   G V +  T+  +
Sbjct: 239 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 298

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I  LCK  +  EA +L   M  + + PNVV +  +I+   + G+ + A K+ ++M V +G
Sbjct: 299 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM-VAAG 357

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             V PN +T++ ++ G CK+G+++ A  +   M++     +  TY  +I+G+ R  S ++
Sbjct: 358 --VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKD 415

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A RL  EM   G+ PN   Y+  IH L   G+ E A  +L +M  K + P+ F Y+ L  
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G CR G V  A ++ +++ + +++ D Y YN LI  L K   +  + +  + M  RGL+P
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 535

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY-------------------- 502
           +  TY  LI GY K G++E A Q+ + M     KPN VIY                    
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595

Query: 503 ---------------NSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFIN 546
                            +I+ L    +++AA  +L   ++ G + D   Y++LI+G    
Sbjct: 596 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 655

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
               +AF +  EM   G+  N V YN LI+ LCK G    AR +   ++  G++P+ VTY
Sbjct: 656 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 715

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           T+L+    K         L+++M+ +G++PD   Y+ + +
Sbjct: 716 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTT 755



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 259/527 (49%), Gaps = 40/527 (7%)

Query: 133 EGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           + LLD     +  P   V+  L+    + G  + A+ +I+++   G   +   ++N +  
Sbjct: 312 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 371

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L K+ ++ R   L K+MV   +  +  T+NL+I    +    ++A  L   M  +GI PN
Sbjct: 372 LCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN 431

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  ++++I+  CQ G+ E A  L  +M   +   + PN+  +  +I+G+C+ G V  A E
Sbjct: 432 VYTYSIMIHGLCQSGEPEKASDLLEEM---TTKGLKPNAFVYAPLISGYCREGNVSLACE 488

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           I   M K  +  ++  Y +LI G ++ G  EE+ +   +M +RGL+PN   Y+  IH   
Sbjct: 489 IFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 548

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             GD+E A  ++  M+D  + P+   Y  L +   ++  +++       +L++ ++ D  
Sbjct: 549 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNR 608

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            Y ILI+ L  S N+ AA ++LS +   G +PD+  Y +LI G CK  + E A  + + M
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
            K    PN+V YN++I+GLCK   +  A+++  +    GL+ + +TY +LI+G    G I
Sbjct: 669 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDI 728

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNIL----------------------------------I 575
           + AF +++EM   GI  +   Y++L                                  +
Sbjct: 729 SNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLV 788

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           +  CK G  Q+  +L+ V++  G++P+ +T   +++  S+     EV
Sbjct: 789 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEV 835



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 223/460 (48%), Gaps = 39/460 (8%)

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A CK  + + A  +   M + G   N V +N++I   C+ G +E A   F+K   M    
Sbjct: 231 AYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKK--DMEDYG 287

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++P+  T+  +ING CK  R   A+ +   M  A +  NV  YA LIDG+ R G+++EA 
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           ++  EMV  G+ PN + Y++ +  L   G ++ A  +L  M+     PD  TY+++ +G 
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            R+   K AF+L +++    +  + Y+Y+I+I+ LC+S     A  LL  M  +GL P+ 
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
             Y  LI GYC+ GN+  A ++++ M KV   P+L  YNS+I GL K   ++ +      
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV-------------- 569
            Q  GLL +  TY+ LI+GY  NG +  A  +   M + G+  N V              
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 570 ---------------------GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
                                 Y ILI+ L   G  + A  ++  +  +G +PD   Y++
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L++   K    E+   + D+M   GV P+   YNA+I  L
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 687



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 225/451 (49%), Gaps = 4/451 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           + N +   ++       +K+ KEMV+ G   N  T++ ++  LCK  +++ A  L  +M+
Sbjct: 330 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 389

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           +    P+ + +N+II    +    + A   FR +  M    + PN  T++ +I+G C+ G
Sbjct: 390 RDSHRPDTITYNLIIEGHFRHHSKKDA---FRLLSEMENAGISPNVYTYSIMIHGLCQSG 446

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             E A ++   M   G+  N   YA LI GY R G+   A  + D+M K  ++P+   YN
Sbjct: 447 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYN 506

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L   G VE +    + M ++ + P+ FTYS L  G  +NG ++ A +L  ++L+ 
Sbjct: 507 SLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDT 566

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +   Y  L+    KS+++        SM+ +G++ D   YG LI      GN+E A
Sbjct: 567 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 626

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
            +V   ++K    P++ +Y+S+I+GLCK A  + A  +L    + G+  + + YN LI+G
Sbjct: 627 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 686

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +G I+ A  +F+ +   G+  N V Y  LI+  CK G    A  L   M+  GI PD
Sbjct: 687 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 746

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
              Y+ L T  S     E+ + L ++M L G
Sbjct: 747 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 169/351 (48%), Gaps = 1/351 (0%)

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           H   +  +CK+   + A+++   M + G   N  TY  LI G  R G+ EEA     +M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             GL+P+   Y + I+ L        A  +L +M    + P+   Y+ L  G  R G   
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AFK+  +++   +  +  +Y+ L+  LCK   +  A  LL  M+     PD ITY  +I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           +G+ +  + + A ++   M+     PN+  Y+ +I+GLC+    + A  LL+     GL 
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            +A  Y  LI+GY   G ++ A  +F +M  V +  +   YN LI  L K G  +++ + 
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
              M   G++P+  TY+ L+  + KN   E   +L   M+ +G+ P++  Y
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 201/473 (42%), Gaps = 54/473 (11%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    V+  L+    + G    A ++  K+        ++ +N+ +  L K+  +    K
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            + +M   G + N  T++ +I+   K   LE A  L  RML +G+ PN V +  ++    
Sbjct: 524 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 583

Query: 263 QVGDLEFALKLFRKM---GVMSGDSV-----------------------------LPNSV 290
           +  D+E     F+ M   GVM  + +                             +P+  
Sbjct: 584 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 643

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            ++ +I+G CK    E A  I   M K G+D N+  Y  LIDG  + G    A  + + +
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           + +GL+PN V Y S I      GD+  A ++ ++M+   I PD F YS+LT G    G +
Sbjct: 704 LAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDL 763

Query: 411 KQA-FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +QA F +    L  H      S+N L++  CK   +    +LL  ++ RGL+P+ +T   
Sbjct: 764 EQAMFLIEEMFLRGH--ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 821

Query: 470 LIDGYCKGGNIEGAVQVYENMKKV------------------EKKPNLVIYNSIINGLCK 511
           +I G  + G +     ++  +++                   + K  L + + +I   CK
Sbjct: 822 IISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCK 881

Query: 512 DASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           + +LD A  L      +   +   +Y  +++     GK++EA  +  EM   G
Sbjct: 882 EGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 36/218 (16%)

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +G+ ++ YCK    + A +V   M++     N V YN +I GLC+  +++ A    +  +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 527 RIGLL-DAITYNTLIN-----------------------------------GYFINGKIA 550
             GL+ D  TY  LIN                                   G+   G   
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EAF M  EM   G+  NK+ Y+ L+  LCK G   +A  L+K M+     PD +TY  ++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               ++ S ++   L  +M  +G+SP+  TY+ +I  L
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 442



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/288 (20%), Positives = 109/288 (37%), Gaps = 53/288 (18%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           G+LD        P +  ++AL+    + G    A +V   +  KG   +   + + +   
Sbjct: 663 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 722

Query: 192 VKLNEIGRFWKLYKEMVSCGYVEN----------------------------------VN 217
            K+ +I   + LY EM++ G   +                                  ++
Sbjct: 723 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS 782

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +FN ++   CK  K++E L L + ++  G+ PN +    II+   + G L     +F ++
Sbjct: 783 SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVEL 842

Query: 278 GVMSGDSV----------------LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              + +S                 +P  V  + +I   CK G ++ A  +R  ++     
Sbjct: 843 QQKTSESAARHFSSLFMDMINQGKIPLDVVDD-MIRDHCKEGNLDKALMLRDVIVAKSAP 901

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
               +Y  ++D   R G   EAL L  EM KRG +   +V    I W 
Sbjct: 902 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWF 949


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 233/467 (49%), Gaps = 4/467 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           + N F S  +  N +      +  M+      +   FN ++ ++ K  +     SL  +M
Sbjct: 34  SHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM 93

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              GI P+V   N++IN  C +    FA  +  K+  +    + P++ T   +I G C  
Sbjct: 94  DSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLG---LQPDTATFTTLIRGLCVE 150

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G++  A  +   MI  G   NV TY TLI+G  + G++  A+RL   M +    P+ VVY
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            S I  L  +  V  A  + S M+ + I PD FTY+ L   LC     K    L NQ++ 
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 270

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ D   ++ +++ LCK   +  A  ++  MI+RG+ P+++TY  L+DG+C    ++ 
Sbjct: 271 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 330

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLIN 541
           AV+V++ M      PN++ YN++ING CK   +D A  L +   Q+  + + +TYNTL++
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 390

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    G++ +A A+F EM   G   +   Y IL+++LCK     +A  L+K +    + P
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 450

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D   YT ++    +    E   ++  ++   G+ P+ +TY  +I+ L
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 253/549 (46%), Gaps = 21/549 (3%)

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           +N+   DDAL     ++  +          LL S    K  P VF               
Sbjct: 43  LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFS-------------- 88

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
              +  ++   G    ++  N  ++    LN  G  + +  +++  G   +  TF  +I 
Sbjct: 89  ---LSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIR 145

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC E K+ +AL L+ +M+  G  PNVV +  +IN  C+VG+   A++L R    M   +
Sbjct: 146 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS---MEQGN 202

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P+ V +  II+  CK  +V  A  +   M+  GI  ++ TY +LI         +   
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L ++M+   +MP+ V++++ +  L  EG +  A  V+  MI + + P+  TY+ L  G 
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C    + +A K+ + ++      +  SYN LIN  CK   +  A  L   M  + LIP+ 
Sbjct: 323 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TL+ G C  G ++ A+ ++  M    + P+L  Y  +++ LCK + LD A +LL+ 
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +   +  D   Y  +I+G    G++  A  +FS + + G+  N   Y I+IN LC+ G 
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 502

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A +L   M  +G  PD  TY T+     +N      I+L  +M+  G S D  T   
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 562

Query: 644 IISPLLGEK 652
           ++  L  +K
Sbjct: 563 LVEMLCDDK 571



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 218/446 (48%), Gaps = 4/446 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  L+R     G    A  +  K+  +G   ++  +   ++ L K+       +L + 
Sbjct: 138 ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS 197

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V  +  +I +LCK+ ++ EA +L+ +M+  GI P++  +  +I+  C + +
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L  +M       ++P+ V  + +++  CK G++  A ++   MI  G++ NV T
Sbjct: 258 WKHVTTLLNQM---INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVT 314

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      +EA+++ D MV  G  PN + YN+ I+       ++ A ++  +M 
Sbjct: 315 YNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 374

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K + P+  TY+ L  GLC  G ++ A  L ++++    + D  +Y IL++YLCK ++L 
Sbjct: 375 QKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD 434

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL ++    + PDI  Y  +IDG C+ G +E A  ++ N+     +PN+  Y  +I
Sbjct: 435 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 494

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLC+   LD A  L       G   D  TYNT+  G   N +   A  +  EM   G +
Sbjct: 495 NGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFS 554

Query: 566 VNKVGYNILINFLCKFGCYQQARELM 591
            +     +L+  LC     Q  ++++
Sbjct: 555 ADVSTTTLLVEMLCDDKLDQSVKQIL 580



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 190/381 (49%), Gaps = 3/381 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+    V+ +++ +  +      A+++  K+  +G S  I  + + +  L  L E     
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  +M++   + +V  F+ V+ ALCKE K+ EA  +   M+  G+ PNVV +N +++  
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C   +++ A+K+F  M V +G +  PN +++N +ING+CK+ R++ A  +   M +  + 
Sbjct: 323 CLQSEMDEAVKVFDTM-VHNGYA--PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI 379

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY TL+ G    G  ++A+ L  EMV  G +P+   Y   + +L  +  ++ A+ +
Sbjct: 380 PNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMAL 439

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  +   ++ PD   Y+I+  G+CR G ++ A  + + +  + +  +  +Y I+IN LC+
Sbjct: 440 LKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 499

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A +L   M   G  PD  TY T+  G  +      A+Q+ + M       ++  
Sbjct: 500 RGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVST 559

Query: 502 YNSIINGLCKDASLDAAKSLL 522
              ++  LC D    + K +L
Sbjct: 560 TTLLVEMLCDDKLDQSVKQIL 580



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 162/357 (45%), Gaps = 42/357 (11%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTYSI 399
           ++AL   + M+     P+ V +N  +  + A+      +F LS+ +D   I PD +T +I
Sbjct: 49  DDALSSFNRMLHMHPPPSTVDFNRLLTSI-AKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L    C       AF +  ++L+  +  D  ++  LI  LC    +  A  L   MI  G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P+++TYGTLI+G CK GN   A+++  +M++   +P++V+Y SII+ LCKD  +  A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 520 SLLQASQRIG--------------------------------------LLDAITYNTLIN 541
           +L   S+ +G                                      + D + ++T+++
Sbjct: 228 NLF--SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
                GKI EA  +   M   G+  N V YN L++  C      +A ++   M+ +G  P
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + ++Y TL+  + K    ++   L ++M    + P+  TYN ++  L      +D +
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 3/205 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+     +G  + A  +  ++   G    +  +   L +L K + +     L K +
Sbjct: 384 TYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 443

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  ++  + +VI  +C+  +LE A  ++  +   G+ PNV  + ++IN  C+ G L
Sbjct: 444 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLL 503

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A KLF +M    G+   P+  T+N I  G  +      A ++   M+  G   +V T 
Sbjct: 504 DEANKLFMEM---DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTT 560

Query: 328 ATLIDGYARGGSSEEALRLCDEMVK 352
             L++        +   ++  E V+
Sbjct: 561 TLLVEMLCDDKLDQSVKQILSEFVQ 585


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 236/515 (45%), Gaps = 77/515 (14%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           ++EM   G    +   NLV+ AL  E + ++  S+Y  ML+ GI P++V +N +++   +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI--RYAMIKAGID 321
            G ++ A KL R+M    G   LP+ VT+N +ING  + G +E A ++  R  M K    
Sbjct: 244 EGRVDQAAKLLREMEARPG-GCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK---K 299

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--- 378
            +  T+  LI GY   GS E+A  L  EM   G++P  V YN+ IH +F  G+VE A   
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 379 --------------------------------LFVLSDMIDKHICPDHFTYSILTKGLCR 406
                                           L++  D+    + P   TY+IL  G CR
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD--- 463
            G +++A +   +++E+    D  +Y IL+N   K  NLA  ++    M+ +GL PD   
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479

Query: 464 --------------------------------IITYGTLIDGYCKGGNIEGAVQVYENMK 491
                                            +TY   +DG CK GN++ A  ++  M 
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
               +P+ + Y  +I+  C+   L  A+ +       GL   A+TY   I+ Y   G + 
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A+  F +M   G+  N+V YN+LI+ LC+ G    A +    M+  G+ P+  TYT L+
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
               K  + EE I L+ +M   G+ PD+ T+NA+ 
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 232/492 (47%), Gaps = 39/492 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   ++ ++    + G  E A  ++ ++++     S   +N  ++       + +  
Sbjct: 264 CLPSDVTYNVVINGLARKGELEKAAQLVDRMRMS-KKASAFTFNPLITGYFARGSVEKAG 322

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EM + G V  V T+N +I+ + +   +E A   +  M   G+ P+++ +N +IN  
Sbjct: 323 ALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGY 382

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G+L+ AL LF   G +    + P+ +T+N +++G+C+LG +E A   +  M++ G  
Sbjct: 383 CKAGNLKEALWLF---GDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQ 439

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY  L++G  +  +        DEM+ +GL P+   YN+ I      G    A  +
Sbjct: 440 PDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQL 499

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI + I  D  TY+I   GLC++G +K A+ L  +++ + +  D  +Y  LI+  C+
Sbjct: 500 TEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCE 559

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A+ +   M+V GL P  +TY   I  YC+ GN+  A   ++ M +   +PN V 
Sbjct: 560 RGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVT 619

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YN +I+ LC+                                   G+   A+  F EM  
Sbjct: 620 YNVLIHALCR----------------------------------MGRTNLAYQHFHEMLE 645

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G++ NK  Y +LI+  CK G +++A  L   M  HGI PD+ T+  L   F +  S + 
Sbjct: 646 RGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQS-KH 704

Query: 622 VIELHDDMVLSG 633
            I+  +++VL  
Sbjct: 705 AIQYMENVVLGA 716



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 4/311 (1%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH--ICPDHFTYSILTKGLCR 406
           EM++ G+ P+ V YN+ +   F EG V+ A  +L +M  +     P   TY+++  GL R
Sbjct: 221 EMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLAR 280

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +++A +L ++ +       A+++N LI       ++  A  L   M   G++P ++T
Sbjct: 281 KGELEKAAQLVDR-MRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVT 339

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y T+I G  + GN+E A   +  M+ +   P+L+ YNS+ING CK  +L  A  L    +
Sbjct: 340 YNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLK 399

Query: 527 RIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R GL  ++ TYN L++GY   G + EA     EM   G   +   Y IL+N   K     
Sbjct: 400 RAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLA 459

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             RE    M+  G+ PD   Y T ++      S  E  +L + M+  G+S D  TYN  +
Sbjct: 460 MVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFL 519

Query: 646 SPLLGEKSAED 656
             L    + +D
Sbjct: 520 DGLCKSGNLKD 530



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 164/341 (48%), Gaps = 12/341 (3%)

Query: 328 ATLIDGYARGGSSEEALRLC----DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           +T  +  AR  +      LC     EM   G+ P     N  +  L  E   +    V +
Sbjct: 161 STKFNTRARNPAPSTCSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYA 220

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG---DAYSYNILINYLC 440
           +M+   I P   TY+ L     R G V QA KL  + +E    G      +YN++IN L 
Sbjct: 221 EMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLRE-MEARPGGCLPSDVTYNVVINGLA 279

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +   L  A QL+  M +        T+  LI GY   G++E A  +   M+     P +V
Sbjct: 280 RKGELEKAAQLVDRMRMSKKA-SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVV 338

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN+II+G+ +  +++AA+      + +GLL D ITYN+LINGY   G + EA  +F ++
Sbjct: 339 TYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDL 398

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           +  G+A + + YNIL++  C+ G  ++AR   + M+  G  PD  TYT L+    K  + 
Sbjct: 399 KRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNL 458

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISP--LLGEKSAEDQV 658
             V E  D+M+  G+ PD   YN  IS   +LG  S   Q+
Sbjct: 459 AMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQL 499


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 257/540 (47%), Gaps = 61/540 (11%)

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           + KG+  S+  +N FL  L K N     ++ +++M   GY  +  T+++V+  LCK  +L
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           ++A  L  ++ +SG+  NV+ ++++I+  C+   ++ AL++F+ M   SG   +P+ VT 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS--SGGGCVPDVVTF 147

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++ G C   R+  A  +   M KAG + NV +Y+TL+DG  + G  +EA RL +EMV+
Sbjct: 148 NSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL-----TKG---- 403
           +  +P+ V Y S +  L     V  A      M+ K    D   +S +      KG    
Sbjct: 208 KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE 267

Query: 404 --------LCRNGCVKQAFKLHNQVLEEHMVGDAY------------------------- 430
                   LCR+G + +A K   +++  +    A                          
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 431 -------------SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
                        +YNI+++ LCK+  L  A++L++ M   GL PD++TY  L+DG CK 
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ-RIGLLDAITY 536
           G ++ A  + E M K    P+     SI+N L K   +D A S L+  + R    D +TY
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTL++G    G+I EA    ++M       +   Y I+I  LC+ G    A  + + M+ 
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK 507

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G++PD V Y +L+   ++N   +  +EL   +  S   PD   +  ++  L     AED
Sbjct: 508 RGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVLDGLCKAGKAED 564



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 229/498 (45%), Gaps = 40/498 (8%)

Query: 109 RFDDALLLMGNLMSANSVSPL-----EFLEGLLDSYEI--------------CKATPAVF 149
           R DDAL +   + S     P        L+GL     +              C+     +
Sbjct: 123 RVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY 182

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
             L+    + G  + A  + +++  K     + A+ +F++ L K N +       ++MV+
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 210 CGYVENVNTFNLVIYALCKE--------------CK---LEEALSLYYRMLKSGIWPNVV 252
            G   +   F+ VI  LCK+              C+   L+EA   +  M+     P+  
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            FN +I+  C+   L   + LF++M  M      PN  T+N +++  CK  +++ A+E+ 
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M   G+  +V TY+ L+DG  + G  + A  L +EM K G+ P++    S ++ L   
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G V+ AL  L  M  +   PD  TY+ L  GLC+ G + +A     +++      D +SY
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            I+I  LC+S   A A  +   M+ RG++PD + Y +L+DG  + G  + A+++   +K 
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKT 539

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
              KP+ V++  +++GLCK    + A  +++     G   DA TY ++++G    GK+ +
Sbjct: 540 SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDK 599

Query: 552 AFAMFSEMRNVGIAVNKV 569
           A  +  +      +V ++
Sbjct: 600 ARQLVDDASETHTSVERL 617



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 246/535 (45%), Gaps = 57/535 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  ++R   + G  + A +++ +L+  G  +++  ++  +    K + +    +++K M
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 208 VSCG-YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            S G  V +V TFN ++  LC   ++ EA  L+  M K+G  PNV+ ++ +++  C+ G 
Sbjct: 135 SSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A +L+ +M      S +P+ V +   + G CK  RV  A +    M+  G   +   
Sbjct: 195 LDEACRLWEEM---VEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251

Query: 327 YATLI-----DGYA------------RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           ++T+I      G+A            R G  +EA +  +EM+ R   P+  ++N+ IH +
Sbjct: 252 FSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAV 311

Query: 370 FAEGDVEGALFVLSDM--IDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
                +   + +   M  + +  CP +  TY+I+   LC+   + +A +L N++    + 
Sbjct: 312 CKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLS 371

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +Y+ L++ LCK   L  A  LL  M   G+ PD  T  ++++   K G ++ A+  
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSH 431

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFI 545
            E MK     P+LV YN++++GLCK   +D A + L          D  +Y  +I     
Sbjct: 432 LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYN--------------------------------I 573
           +G+ A A A+F EM   G+  + V Y+                                +
Sbjct: 492 SGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKM 551

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           +++ LCK G  + A E+++ M   G   D  TY ++V+   K    ++  +L DD
Sbjct: 552 VLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 277/585 (47%), Gaps = 87/585 (14%)

Query: 145 TPAVF--DALVRACTQIGATEGAYDVIQKLKVKGH---SVSIHAWNNFLSHLVKLNEIGR 199
           TP VF  +AL++       ++ A +++  +   G    S ++ +++  +    K  E+ +
Sbjct: 162 TPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDK 221

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + L+ EM+  G+  +V T++ +I  LCK   + +A ++   M   G+ PN   +N++I 
Sbjct: 222 AYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIR 281

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C +G LE A++L +KM   SG  + P+ VT+  +I  +CK+GR   A  +  +M++ G
Sbjct: 282 GYCSLGQLEEAVRLLKKM---SGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338

Query: 320 IDCNVRTYATLIDGYA-----------------------------------RGGSSEEAL 344
              N   Y  L+ GYA                                   + G+ ++A+
Sbjct: 339 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 398

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
               EM + GL P+ V Y++ IH L   G VE A++  + M+ + + P+  +++ L  GL
Sbjct: 399 TAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 458

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C  G  K+  +L  +++   +  DA   N +++ LCK   +  A+     +I  G+ P++
Sbjct: 459 CSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNV 518

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA------ 518
           ++Y TLIDGYC  G ++ +++ ++ M  +  +P+   YN+++NG  K+  ++ A      
Sbjct: 519 VSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYRE 578

Query: 519 -----------------KSLLQASQ-------------RIGLLDAITYNTLINGYFINGK 548
                              L QA +             R   L   TYNT++ G   N  
Sbjct: 579 MFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSC 638

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA  MF ++R+    ++   +NI+IN L K G   +A+ L   M+L G +P  +TY+ 
Sbjct: 639 VDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSL 698

Query: 609 LVTRFSKNCSPEEVIELHDDMVLS----GVSPDNQTYNAIISPLL 649
           ++    K+   E ++E  DD+ LS    G + D+   N II  LL
Sbjct: 699 MI----KSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLL 739



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 238/521 (45%), Gaps = 77/521 (14%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW---PNVVCFNMIIN 259
           +++ M   GY  +V ++N +I  LC E K +EAL L   M   G +   PNVV ++ II+
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              + G+++ A  LF +   M G    P+ VT++ +I+G CK   +  AE I   M   G
Sbjct: 212 GFFKEGEVDKAYFLFDE---MIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY----------------- 362
           +  N RTY  +I GY   G  EEA+RL  +M   GL P+ V Y                 
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328

Query: 363 -------------NSTIHWLFAEG-DVEGALFVLSDMID--------------------- 387
                        NSTI+ +   G   +GAL  + D++D                     
Sbjct: 329 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 388

Query: 388 -KH-----------------ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
            KH                 + PD  +YS +   LC+ G V+ A    NQ++ E +  + 
Sbjct: 389 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNI 448

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            S+  LI+ LC        ++L   MI RG+ PD I   T++D  CK G +  A   ++ 
Sbjct: 449 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM 508

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           +  +  KPN+V YN++I+G C    +D +         IGL  D+ TYN L+NGYF NG+
Sbjct: 509 VIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGR 568

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +A A++ EM    +    +  NI+++ L + G    AREL   M+  G      TY T
Sbjct: 569 VEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNT 628

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++    +N   +E + + +D+       D  T+N +I+ LL
Sbjct: 629 VLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALL 669



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 226/446 (50%), Gaps = 3/446 (0%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYR-MLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           V+NV T N +I  LC   + ++A+ + +R M + G  P+V  +N +I   C     + AL
Sbjct: 127 VQNV-TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 185

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L   M    G +  PN V+++ II+GF K G V+ A  +   MI  G   +V TY++LI
Sbjct: 186 ELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           DG  +  +  +A  +   M  +G+MPN   YN  I    + G +E A+ +L  M    + 
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQ 305

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  TY +L +  C+ G   +A  + + ++ +    ++  Y+IL++       L   + L
Sbjct: 306 PDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL 365

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  MI  G+  +   +  LI  Y K G ++ A+  +  M++   +P++V Y+++I+ LCK
Sbjct: 366 LDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCK 425

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              ++ A          GL  + I++ +LI+G    G+  +   +  EM N GI  + + 
Sbjct: 426 IGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIF 485

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
            N +++ LCK G   +A++   ++I  G+ P+ V+Y TL+  +      +E I+  D MV
Sbjct: 486 MNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMV 545

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G+ PD+ TYNA+++        ED
Sbjct: 546 SIGLRPDSWTYNALLNGYFKNGRVED 571



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 208/466 (44%), Gaps = 47/466 (10%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD-------LEFALKLFRKMGVMSGDSV 285
           E+AL+L+  +L      +V  FN ++    +             A+ LF  M     + +
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 286 LPNSVTHNCIINGFCKLGRVEFA------------------------------------E 309
             N      +I  FC +GR++ A                                    +
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG---LMPNNVVYNSTI 366
            +   M + G   +V +Y  LI G      S+EAL L   M   G     PN V Y++ I
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
              F EG+V+ A F+  +MI +   PD  TYS L  GLC+   + +A  +   + ++ ++
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  +YNI+I   C    L  A +LL  M   GL PD++TY  LI  YCK G    A  V
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           +++M +  +KPN  IY+ +++G     +L   + LL    R G+  +   +N LI  Y  
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +G + +A   F+EMR  G+  + V Y+ +I+ LCK G  + A      M+  G+ P+ ++
Sbjct: 391 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIIS 450

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +T+L+         ++V EL  +M+  G+ PD    N I+  L  E
Sbjct: 451 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 496



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 216/437 (49%), Gaps = 4/437 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L++   +IG    A  V   +  KG   +   ++  L        +     L   M+  G
Sbjct: 314 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 373

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
                  FN++I A  K   +++A++ +  M ++G+ P+VV ++ +I+  C++G +E A+
Sbjct: 374 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAV 433

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
             F +M     + + PN ++   +I+G C +G  +  EE+ + MI  GI  +     T++
Sbjct: 434 YHFNQM---VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM 490

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           D   + G   EA    D ++  G+ PN V YN+ I      G ++ ++     M+   + 
Sbjct: 491 DNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLR 550

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD +TY+ L  G  +NG V+ A  L+ ++  + +   A + NI+++ L ++  + AA++L
Sbjct: 551 PDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAAREL 610

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M+ RG    I TY T++ G C+   ++ A++++E+++  E + ++  +N +IN L K
Sbjct: 611 YMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLK 670

Query: 512 DASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              +D AKSL  A    G +   ITY+ +I      G + E+  +F  M   G A +   
Sbjct: 671 VGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHM 730

Query: 571 YNILINFLCKFGCYQQA 587
            N++I  L + G  ++A
Sbjct: 731 LNVIIRRLLEKGDVRRA 747



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 201/435 (46%), Gaps = 61/435 (14%)

Query: 142 CKATPAVFDALVRACTQIG-----------ATEGAY----DVIQKLKVKGHSVSIHAWNN 186
           C    +VFD++VR   +             AT+GA     D++  +   G      A+N 
Sbjct: 324 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 383

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K   + +    + EM   G   +V +++ VI+ LCK  ++E+A+  + +M+  G
Sbjct: 384 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG 443

Query: 247 IWPNVVCFNMIINEACQVGDL----EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           + PN++ F  +I+  C +G+     E A ++  +        + P+++  N I++  CK 
Sbjct: 444 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR-------GIHPDAIFMNTIMDNLCKE 496

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GRV  A++    +I  G+  NV +Y TLIDGY   G  +E+++  D MV  GL P++  Y
Sbjct: 497 GRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTY 556

Query: 363 NSTIHWLFAEGDVEGALFVLSD-----------------------------------MID 387
           N+ ++  F  G VE AL +  +                                   M+D
Sbjct: 557 NALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVD 616

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +       TY+ +  GLC N CV +A ++   +  +    D +++NI+IN L K   +  
Sbjct: 617 RGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDE 676

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK L S+M++RG +P +ITY  +I    + G +E +  ++ +M+K     +  + N II 
Sbjct: 677 AKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIR 736

Query: 508 GLCKDASLDAAKSLL 522
            L +   +  A + L
Sbjct: 737 RLLEKGDVRRAGTYL 751


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 224/447 (50%), Gaps = 4/447 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  L+R     G    A  +  K+  +G    +  +   ++ L K+       +L   
Sbjct: 132 ATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV      NV  +N +I +LCK+ ++ EA +L+  M+  GI P++  +N +I+  C + +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L  +M       ++P+ V+ N +++  CK G+V  A ++   MI+ G++ NV T
Sbjct: 252 WKHVATLLNEM---VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      +EA+++ D MV +G MPN + YN+ I+       ++ A+++  +M 
Sbjct: 309 YTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 368

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + + PD  TYS L  GLC    ++ A  L ++++    + +  +Y IL++YLCK+  LA
Sbjct: 369 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 428

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL ++    L PDI      IDG C+ G +E A  ++ N+     +P++  Y+ +I
Sbjct: 429 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 488

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLC+   LD A  L +     G  L+   YNT+  G+  N + + A  +  EM   G +
Sbjct: 489 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 548

Query: 566 VNKVGYNILINFLCKFGCYQQARELMK 592
            +     + +  L   G  Q  +++++
Sbjct: 549 ADASTMTLFVKMLSDDGLDQSLKQILR 575



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 238/480 (49%), Gaps = 5/480 (1%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           Q L +  H +S+ + N F S  +  N I      +  M+      +   FN ++ ++ K 
Sbjct: 16  QMLSLLAHFLSL-SHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM 74

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
                 LSL ++M   GI PN+   +++IN  C +  + FA  +  K+  +      P++
Sbjct: 75  KHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQ---PDT 131

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T   +I G    G++  A  +   MI  G   +V TY TLI+G  + G++  A+RL   
Sbjct: 132 ATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MV++   PN   YN+ I  L  +  V  A  + S+M+ K I PD FTY+ L   LC    
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            K    L N++++  ++ D  S+N +++ LCK   +  A  ++  MI RG+ P+++TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+DG+C    ++ AV+V++ M      PN++ YN++ING CK   +D A  L     R  
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L+ D +TY+TLI+G     ++ +A A+F EM       N V Y IL+++LCK     +A 
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 431

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L+K +    + PD       +    +    E   +L  ++   G+ PD  TY+ +I+ L
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 245/501 (48%), Gaps = 4/501 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+ +  ++        +  ++   G   +I+  +  ++    LN +G  + +  +++
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G+  +  TF  +I  +  E K+ EAL L+ +M+  G  P+VV +  +IN  C+VG+  
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A++L   +G M   +  PN   +N II+  CK  +V  A  +   M+  GI  ++ TY 
Sbjct: 184 AAIRL---LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 240

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LI         +    L +EMV   +MP+ V +N+ +  L  EG V  A  V+  MI +
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+  TY+ L  G C    + +A K+ + ++ +  + +  SYN LIN  CK   +  A
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L   M  + LIPD +TY TLI G C    ++ A+ ++  M    + PNLV Y  +++ 
Sbjct: 361 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 420

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAITYNTL-INGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK+  L  A +LL+A +   L   I  N + I+G    G++  A  +FS + + G+  +
Sbjct: 421 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 480

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              Y+I+IN LC+ G   +A +L + M  +G   +   Y T+   F +N      I+L  
Sbjct: 481 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 540

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
           +MV  G S D  T    +  L
Sbjct: 541 EMVARGFSADASTMTLFVKML 561



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 177/349 (50%), Gaps = 3/349 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++ ++ +  +      A+++  ++  KG S  I  +N+ +  L  L E     
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EMV    + +V +FN V+ ALCKE K+ EA  +  +M++ G+ PNVV +  +++  
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C + +++ A+K+F  M V  G   +PN +++N +ING+CK+ R++ A  +   M +  + 
Sbjct: 317 CLLSEMDEAVKVFDTM-VCKG--CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI 373

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY+TLI G       ++A+ L  EMV    +PN V Y   + +L     +  A+ +
Sbjct: 374 PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL 433

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  +   ++ PD    +I   G+CR G ++ A  L + +  + +  D ++Y+I+IN LC+
Sbjct: 434 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 493

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
              L  A +L   M   G   +   Y T+  G+ +      A+Q+ + M
Sbjct: 494 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 542



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 1/333 (0%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L+   A+       L L  +M   G+ PN    +  I+       V  A  VL+ ++
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                PD  T++ L +G+   G + +A  L ++++ E    D  +Y  LIN LCK  N +
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           AA +LL SM+ +   P++  Y T+ID  CK   +  A  ++  M      P++  YNS+I
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LC         +LL       ++ D +++NT+++     GK+ EA  +  +M   G+ 
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V Y  L++  C      +A ++   M+  G +P+ ++Y TL+  + K    ++ + L
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 363

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             +M    + PD  TY+ +I  L   +  +D +
Sbjct: 364 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 396



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 1/243 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A    N++L          +N L+  + K  + +    L   M   G+ P+I T   
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+ +C    +  A  V   + K+  +P+   + ++I G+  +  +  A  L       G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D +TY TLING    G  + A  +   M       N   YN +I+ LCK     +A 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   M+  GI PD  TY +L+      C  + V  L ++MV S + PD  ++N ++  L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 649 LGE 651
             E
Sbjct: 282 CKE 284


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 280/618 (45%), Gaps = 80/618 (12%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA 155
             C  +H+++       A L  GN++ A       FL+      E+ +   ++F  L+  
Sbjct: 38  GDCFTLHVMLR------ACLKEGNILEAEQ----HFLQAKARGVELDQEAYSIFVHLLCL 87

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
               G    A  ++++++  G       + + ++  VK   +    +L  +MV+CG   N
Sbjct: 88  KPNSGY---ALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMN 144

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           +     ++   C +  L  AL L   + +SG+ PN V ++++I+  C+ G++E A + + 
Sbjct: 145 LAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYS 204

Query: 276 KM---GVMSG----------------------------DSVLPNSVTHNCIINGFCKLGR 304
           +M   G+ S                             +S L N  T N +++  CK G+
Sbjct: 205 EMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGK 264

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A  +   +I  GI  NV +Y  +I G+ R  +   A ++  EM+  G  PN V +  
Sbjct: 265 MNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTI 324

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            +   F +GD+E A  +   M D +I P   T  I+ KGLC+ G   +   L N+ + + 
Sbjct: 325 LMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQG 384

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
            V     YN +I+   K  N+  A  +   M   G+ P  +TY +LIDG+CKG NI+ A+
Sbjct: 385 FVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLAL 444

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-------------- 530
           ++  +MK+   K ++  Y ++I+G CK   + +A  LL   +  GL              
Sbjct: 445 KLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGF 504

Query: 531 ----------------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
                                  D  TY +LI+G   +G++  A  + +EM + GI  + 
Sbjct: 505 KNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDD 564

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             + +LIN LC  G ++ AR++++ M    +IP  + Y TL+    K  + +E   LHD+
Sbjct: 565 RAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDE 624

Query: 629 MVLSGVSPDNQTYNAIIS 646
           M+  G+ PDN TY+ +++
Sbjct: 625 MLDRGLVPDNITYDILVN 642



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 257/540 (47%), Gaps = 38/540 (7%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           ++RAC + G    A     + K +G  +   A++ F+  L      G    L +EM + G
Sbjct: 46  MLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAG 105

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           ++    TF  VI A  KE  + EAL L   M+  G   N+     ++   C  G+L  AL
Sbjct: 106 WIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSAL 165

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            L  ++   S   ++PN VT++ +I+G CK G +E A E    M   GI  +V +  +++
Sbjct: 166 VLVNEI---SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 222

Query: 332 DGY----------------------------------ARGGSSEEALRLCDEMVKRGLMP 357
           +GY                                   + G   EA  L DE++ +G+ P
Sbjct: 223 EGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 282

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V YN+ I     + ++  A  V  +M+D    P+  T++IL  G  + G ++ AF + 
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++ + +++    +  I+I  LCK+      + L +  + +G +P  + Y T+IDG+ K 
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           GNI  A  VY  M +V   P+ V Y S+I+G CK  ++D A  LL   +R GL +D   Y
Sbjct: 403 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            TLI+G+     +  A  + +E+R  G++ N+  YN +I         ++A +L K M+ 
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 522

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            GI  D  TYT+L+    K+       ++H +M+  G+ PD++ +  +I+ L  +   E+
Sbjct: 523 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 582



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 208/409 (50%), Gaps = 4/409 (0%)

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           D+ E   A    F+ L+    + G    A ++  ++  KG S ++ ++NN +    + + 
Sbjct: 240 DALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           I    K+YKEM+  G+  N  TF +++    K+  +E A S+++RM  + I P      +
Sbjct: 300 INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 359

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           II   C+ G       LF K  V  G   +P  + +N II+GF K G +  A  +   M 
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKF-VSQG--FVPTCMPYNTIIDGFIKEGNINLASNVYREMC 416

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           + GI  +  TY +LIDG+ +G + + AL+L ++M ++GL  +   Y + I       D++
Sbjct: 417 EVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMK 476

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +L+++    + P+ F Y+ +  G      V++A  L+ +++ E +  D  +Y  LI
Sbjct: 477 SAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLI 536

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + L KS  L  A  + + M+ +G++PD   +  LI+G C  G  E A ++ E+M      
Sbjct: 537 DGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMI 596

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYF 544
           P+++IYN++I G  K+ +L  A  L       GL+ D ITY+ L+NG F
Sbjct: 597 PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKF 645



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 228/514 (44%), Gaps = 38/514 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI   N  L+ +V+ N      +L+ +M+  G   +  T ++++ A  KE  + EA   +
Sbjct: 4   SIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHF 63

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +    G+  +   +++ ++  C   +  +AL L R+   M     +P   T   +I   
Sbjct: 64  LQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE---MRAAGWIPPEGTFTSVITAC 120

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            K G V  A  ++  M+  G   N+    +L+ GY   G+   AL L +E+ + GL+PN 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHI----------------------------- 390
           V Y+  I      G++E A    S+M  K I                             
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 391 -----CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                  + FT++ L   LC+ G + +A  L ++V+ + +  +  SYN +I   C+ +N+
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
            AA ++   M+  G  P+ +T+  L+DGY K G+IE A  ++  MK     P       I
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I GLCK       + L       G +   + YNT+I+G+   G I  A  ++ EM  VGI
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             + V Y  LI+  CK      A +L+  M   G+  D   Y TL+  F K    +   E
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 480

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           L +++  +G+SP+   YN++I+      + E+ +
Sbjct: 481 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAI 514


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 271/553 (49%), Gaps = 12/553 (2%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMS--ANSVSPLEFLEGLLDSYEICKA---T 145
           S+ L+S  A++H+L    ++  A  L+ +L+        P      L ++ E  ++   +
Sbjct: 72  SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFS 131

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+    ++G  E A  V +++K    S    A  + L+ LV+       W  Y+
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWVSREMKCSPDS---KACLSILNGLVRRRRFDSVWVDYQ 188

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            M+S G V +V+ + ++     K+    +   L   M   GI PNV  + + I + C+  
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +E A K+F    +M    VLPN  T++ +I+G+CK G V  A  +   ++ A +  NV 
Sbjct: 249 KMEEAEKMFE---LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            + TL+DG+ +      A  L   MVK G+ PN  VYN  IH     G++  A+ +LS+M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
              ++ PD FTY+IL  GLC    V +A +L  ++  E +   + +YN LI+  CK  N+
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L S M   G+ P+IIT+ TLIDGYC   +I+ A+ +Y  M      P++V Y ++
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+   K+A++  A  L       G+  +  T+  L++G++  G+++ A   + E      
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N VG+  LI  LC+ G   +A      M   GI PD  +Y +++    +     + + 
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605

Query: 625 LHDDMVLSGVSPD 637
           L  DM+ +G+ P+
Sbjct: 606 LQCDMIKTGILPN 618



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 165/308 (53%), Gaps = 1/308 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+ RGL+P+  +Y       F +G       +L +M    I P+ + Y+I    LCR+  
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +++A K+   + +  ++ + Y+Y+ +I+  CK+ N+  A  L   ++V  L+P+++ +GT
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+DG+CK   +  A  ++ +M K    PNL +YN +I+G CK  ++  A  LL   + + 
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D  TY  LING  I  ++AEA  +F +M+N  I  +   YN LI+  CK    +QA 
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L   M   G+ P+ +T++TL+  +      +  + L+ +M + G+ PD  TY A+I   
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489

Query: 649 LGEKSAED 656
             E + ++
Sbjct: 490 FKEANMKE 497



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 115/528 (21%), Positives = 219/528 (41%), Gaps = 88/528 (16%)

Query: 42  NLRQRKWKILEQM-APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI 100
           N+  R +  LE + +P  +  + + ++ EF +      E   WV    + S   ++  +I
Sbjct: 113 NMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMG--LFEEALWVSREMKCSPDSKACLSI 170

Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------------EGLLDSYEICKA 144
           ++ LV  RRFD   +    ++S   V  +                   E LLD       
Sbjct: 171 LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGI 230

Query: 145 TPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
            P V+     +    +    E A  + + +K  G   +++ ++  +    K   + + + 
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LYKE++    + NV  F  ++   CK  +L  A SL+  M+K G+ PN+  +N +I+  C
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350

Query: 263 QVGDLEFALKLFRKMGV--------------------------------MSGDSVLPNSV 290
           + G++  A+ L  +M                                  M  + + P+S 
Sbjct: 351 KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA 410

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +I+G+CK   +E A ++   M  +G++ N+ T++TLIDGY      + A+ L  EM
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD----------------- 393
             +G++P+ V Y + I   F E +++ AL + SDM++  I P+                 
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530

Query: 394 ------------------HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
                             H  ++ L +GLC+NG + +A +  + +    +  D  SY  +
Sbjct: 531 SVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSM 590

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           +    +   +     L   MI  G++P+++    L   Y   G ++ A
Sbjct: 591 LKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 11/307 (3%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA---CTQIGATEGAYDVIQK 171
           L+ G+  S N +  +    GLL   E    +P VF   +     C +    E A  + QK
Sbjct: 345 LIHGHCKSGNMLEAV----GLLSEMESLNLSPDVFTYTILINGLCIEDQVAE-ANRLFQK 399

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +K +    S   +N+ +    K   + +   L  EM + G   N+ TF+ +I   C    
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++ A+ LY+ M   GI P+VV +  +I+   +  +++ AL+L+  M + +G  + PN  T
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM-LEAG--IHPNDHT 516

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
             C+++GF K GR+  A +      +     N   +  LI+G  + G    A R   +M 
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G+ P+   Y S +     E  +   + +  DMI   I P+     +L +    NG VK
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVK 636

Query: 412 QAFKLHN 418
            A  L N
Sbjct: 637 SACFLTN 643


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 251/495 (50%), Gaps = 6/495 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + TP +  F+ ++ +  ++     A  +  +L++KG    +   N  ++    + +I   
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +  +++  GY  +  T N +I  LC + ++++AL  + ++L  G   N V +  +IN 
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++GD   A+KL RK+    G    PN   ++ II+  CK   V  A  +   M   GI
Sbjct: 174 VCKIGDTRGAIKLLRKI---DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGI 230

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY+TLI G+   G  +EA+ L +EMV + + PN   YN  +  L  EG V+ A  
Sbjct: 231 SADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL+ M+   + PD  TYS L  G      VK+A  + N +    +  D ++Y ILIN  C
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  L   M  + ++P I+TY +LIDG CK G I     + + M+   +  +++
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVI 410

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEM 559
            Y+S+I+GLCK+  LD A +L    +   +   I T+  L++G    G++ +A  +F ++
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G  +N   YN++IN  CK G  ++A  ++  M  +G IP+  T+ T++    K    
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 620 EEVIELHDDMVLSGV 634
           ++  +L   M+  G+
Sbjct: 531 DKAEKLLRQMIARGL 545



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 228/444 (51%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M+   +   +  FN ++ +  K      A+SL +R+   GI P+++  N++IN  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G + F   +  K   +      P++VT N +I G C  G+V+ A      ++  G   N
Sbjct: 107 MGQITFGFSVLAK---ILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +YATLI+G  + G +  A++L  ++  R   PN  +Y++ I  L     V  A  + S
Sbjct: 164 QVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 223

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K I  D  TYS L  G C  G +K+A  L N+++ + +  + Y+YNIL++ LCK  
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  AK +L+ M+   + PD+ITY TL+DGY     ++ A  V+  M  +   P++  Y 
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +ING CK+  +D A +L +   +  ++  I TY++LI+G   +G+I   + +  EMR+ 
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDR 403

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   + + Y+ LI+ LCK G   +A  L   M    I P+  T+T L+    K    ++ 
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            E+  D++  G   +  TYN +I+
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMIN 487



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 202/418 (48%), Gaps = 39/418 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A+S + RML     P ++ FN I++   ++     A+ L  ++ +     + P+ +T
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL---KGIQPDLIT 96

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC +G++ F                                      +  +++
Sbjct: 97  LNILINCFCHMGQITFG-----------------------------------FSVLAKIL 121

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KRG  P+ V  N+ I  L  +G V+ AL     ++ +    +  +Y+ L  G+C+ G  +
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A KL  ++       +   Y+ +I+ LCK   ++ A  L S M V+G+  D++TY TLI
Sbjct: 182 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
            G+C  G ++ A+ +   M      PN+  YN +++ LCK+  +  AKS+L    +  + 
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITY+TL++GYF+  ++ +A  +F+ M  +G+  +   Y ILIN  CK     +A  L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            K M    ++P  VTY++L+    K+     V +L D+M   G   D  TY+++I  L
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGL 419



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 139/270 (51%), Gaps = 1/270 (0%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD  T +IL    C  G +   F +  ++L+     D  + N LI  LC    +  
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A      ++ +G   + ++Y TLI+G CK G+  GA+++   +     KPN+ +Y++II+
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LCK   +  A  L       G+  D +TY+TLI G+ I GK+ EA  + +EM    I  
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YNIL++ LCK G  ++A+ ++ VM+   + PD +TY+TL+  +      ++   + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + M L GV+PD  TY  +I+     K  ++
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDE 357



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 9/252 (3%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A    N++L          +N +++   K  + + A  L   + ++G+ PD+IT   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-----KSLLQA 524
           LI+ +C  G I     V   + K    P+ V  N++I GLC    +  A     K L Q 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
            Q    L+ ++Y TLING    G    A  +  ++       N   Y+ +I+ LCK+   
Sbjct: 160 FQ----LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +A  L   M + GI  D VTY+TL+  F      +E I L ++MVL  ++P+  TYN +
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 645 ISPLLGEKSAED 656
           +  L  E   ++
Sbjct: 276 VDALCKEGKVKE 287


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 153/577 (26%), Positives = 262/577 (45%), Gaps = 90/577 (15%)

Query: 168 VIQKLKVKGHSVSIHAW--------------NNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
           V++ LKV G ++S   W              N  ++ LV      + + +++EM+  G  
Sbjct: 92  VLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIA 151

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            N  +FN++I +  +  + ++A++ +  M +    P++  F ++++  C+ G  E A ++
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           F +M  M+   V P+   H  ++    K  RV+ A E+   M K G   +   Y T+IDG
Sbjct: 212 FHEM--MAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDG 269

Query: 334 YARGGSSEEALRLCDEMVKR-----------------------------------GLMPN 358
            A+ G ++EAL++ D M+ +                                   G  PN
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPN 329

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           +V+Y S IH     G ++ A  +  +M++    PD  T++++  GLC++G  +QA K   
Sbjct: 330 SVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFE 389

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           +++      +  +Y  +I  L K   +A A +++  MI  G  PD +TY  L+DG+CK G
Sbjct: 390 EMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLG 449

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD------------AAKSL---LQ 523
            ++ A Q+ + + K    PNL +Y+S++NGLC   S++            AA++L   L 
Sbjct: 450 RLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLC 509

Query: 524 ASQRIGLL----------------------DAITYNTLINGYFIN--GKIAEAFAMFSEM 559
            S  +GL                       DA TYN LING   +   ++  AFA+  ++
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
             VG   + V Y  L   LCK G   +A ++++     G   D V YT L T        
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  + L  +MV  G +PD   Y  II+ L+  K  ED
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLED 666



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 156/541 (28%), Positives = 249/541 (46%), Gaps = 14/541 (2%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           ++ G   + ++   L+ L+ +L   + C  T   +  LV +  + G  E A ++ + +  
Sbjct: 266 MIDGLAKAGHAQEALKVLDNML--AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G   +   + + +    K   +     L+ EMV  GY  +V T  ++I  LCK    E+
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A   +  M++ G  PNVV +  II    ++G +  A   FR M  M      P+SVT+ C
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA---FRIMKGMIAHGCFPDSVTYIC 440

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +++GFCKLGR++ A ++   + K     N++ Y++L++G   GGS E+ L    E  K  
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAA 500

Query: 355 ---LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN--GC 409
              L P   +  S I  L   G ++ A  +   M+ +   PD  TY+IL  GLCR+    
Sbjct: 501 AETLDPG--LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR 558

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V++AF L + + +   + DA +Y  L   LCK   +  A ++L     RG   D++ Y  
Sbjct: 559 VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRI 528
           L  G C  G ++ AV +++ M +    P+   Y  IINGL K   L DA K   +   + 
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG-YNILINFLCKFGCYQQA 587
                 TY  L+      G + EAF  F  M   G  V  V  Y+ LI+  CK      A
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAA 738

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            +L + MI  G +P  VT  +L     ++   E+  EL  +M   G  P   T+ AI+  
Sbjct: 739 LKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG 798

Query: 648 L 648
           L
Sbjct: 799 L 799



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 181/424 (42%), Gaps = 45/424 (10%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  +++  ++IG    A+ +++ +   G       +   L    KL  +    
Sbjct: 396 CKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAA 455

Query: 202 KLYKEMVSCGYVENVNTFNL------------------------------------VIYA 225
           +L  E+  C    N+  ++                                     +I  
Sbjct: 456 QLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVG 515

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD--LEFALKLFRKMGVMSGD 283
           LCK  +L+EA  ++ RM+  G  P+   +N++IN  C+  +  +E A  L   +  +   
Sbjct: 516 LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG-- 573

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
             LP++VT+  +  G CK+G V+ A ++       G + +V  Y  L  G    G  + A
Sbjct: 574 -YLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           + L  EMV++G  P+   Y   I+ L     +E A     +MI K   P   TY+ L + 
Sbjct: 633 VSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQA 692

Query: 404 LCRNGCVKQAF-KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           LC  G V +AF +  + +    +VG    Y+ LI+  CK+  + AA +L   MI RG +P
Sbjct: 693 LCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVP 752

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
             +T  +L DG  + G  E A ++ + M      P+   + +I++GL K    D +  LL
Sbjct: 753 TAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS---DESGKLL 809

Query: 523 QASQ 526
           +  Q
Sbjct: 810 KLVQ 813



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 5/195 (2%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C Q G  + A  + Q++  +G +    A+   ++ L+K+ ++    K + EM+  G    
Sbjct: 624 CYQ-GQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPT 682

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMIINEACQVGDLEFALKLF 274
           V T+  ++ ALC    ++EA   +  ML  G +  +V+ ++ +I+  C+   ++ ALKLF
Sbjct: 683 VATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLF 742

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
             M +  G+  +P +VT   + +G  + G+ E A+E+   M   G   +  T+  ++DG 
Sbjct: 743 EDM-ISRGN--VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799

Query: 335 ARGGSSEEALRLCDE 349
            +   S + L+L  E
Sbjct: 800 RKSDESGKLLKLVQE 814


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 257/519 (49%), Gaps = 41/519 (7%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           DV+ + ++K    ++  +   ++   K   +     LYK+M+  G + +V T + ++Y  
Sbjct: 307 DVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGF 366

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C+  KL EA  L+  M + G+ PN V +  IIN   + G +  A  L  +M V+ G S  
Sbjct: 367 CRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM-VVRGISF- 424

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            + VT   +++G  K+G+ + AEE+   ++K  +  N  TY+ L+DGY + G  E A  +
Sbjct: 425 -DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELV 483

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +M K  + PN + ++S I+    +G +  A+ VL +M+ +++ P+   Y+IL  G  +
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK 543

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G    A     ++    +      ++IL+N L +   +  A+ L+  M  +G+ PDI+ 
Sbjct: 544 AGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVN 603

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y +LIDGY K GN   A+ + + MK+   + ++V YN++I GL +    D  + +     
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP-RYVCSRMI 662

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG--- 582
            +GL  D ITYNT+IN Y I GK  +A  + +EM++ GI  N V YNILI  LCK G   
Sbjct: 663 ELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVP 722

Query: 583 ----------CYQQARELMKVMILH-----------------------GIIPDYVTYTTL 609
                      Y ++ +  K++ +H                       GI  D VTY  L
Sbjct: 723 TPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNAL 782

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  +      E+ ++ +  M + G++P+  TYN ++  L
Sbjct: 783 IRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL 821



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 230/456 (50%), Gaps = 28/456 (6%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW---------------------PNVVC 253
           ++ T+N ++ A CK   L  A SL+  +L  G W                     P +V 
Sbjct: 266 DIVTYNTLLKAFCKTGDLTRAESLFNEIL--GFWKDEDRLKNNDVVTQNEIKNLQPTLVT 323

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +I   C+   +E +  L++KM +M+G  ++P+ VT + I+ GFC+ G++  A  +  
Sbjct: 324 YTTLIAAYCKFVGVEESHSLYKKM-IMNG--IMPDVVTCSSILYGFCRHGKLTEAAVLFR 380

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M + G+D N  +YAT+I+   + G   EA  L  +MV RG+  + V   + +  LF  G
Sbjct: 381 EMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVG 440

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             + A  V   ++  ++ P+  TYS L  G C+ G ++ A  +  ++ +EH+  +  +++
Sbjct: 441 KTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFS 500

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +IN   K   L+ A  +L  M+ R ++P+ I Y  LIDGY K G  + A    + MK  
Sbjct: 501 SIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSR 560

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
             + + VI++ ++N L +   +D A+SL+      G+  D + Y +LI+GYF  G    A
Sbjct: 561 RLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAA 620

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            ++  EM+   I  + V YN LI  L + G Y   R +   MI  G+ PD +TY T++  
Sbjct: 621 LSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINT 679

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +      E+ +++ ++M   G+ P+  TYN +I  L
Sbjct: 680 YCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGL 715



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/590 (24%), Positives = 264/590 (44%), Gaps = 43/590 (7%)

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYE----------------I 141
           C ++ L +   RF  A     ++ +   V  L F   LL  +                  
Sbjct: 63  CTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLF 122

Query: 142 CKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C   P VF  + LV +  ++G  + A   ++   V    +    +N  +    +   + +
Sbjct: 123 CGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVV--DIDNVTYNTVIWGFCQKGLVDQ 180

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + L  EMV  G   +  T N+++   C+   ++ A  + Y ++  G+  +V+  N +I+
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLID 240

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK-- 317
             C+   +  A +L           V  + VT+N ++  FCK G +  AE +   ++   
Sbjct: 241 GYCEAVLMSQATELIENSW---RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297

Query: 318 -----------------AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
                              +   + TY TLI  Y +    EE+  L  +M+  G+MP+ V
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVV 357

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
             +S ++     G +  A  +  +M +  + P+H +Y+ +   L ++G V +AF L +Q+
Sbjct: 358 TCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           +   +  D  +   +++ L K      A+++  +++   L P+ +TY  L+DGYCK G +
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTL 539
           E A  V + M+K    PN++ ++SIING  K   L  A  +L +  QR  + + I Y  L
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GYF  G+   A     EM++  +  + V ++IL+N L + G   +AR L+  M   GI
Sbjct: 538 IDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGI 597

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            PD V Y +L+  + K  +    + +  +M    +  D   YNA+I  LL
Sbjct: 598 DPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL 647



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 249/557 (44%), Gaps = 88/557 (15%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E  E  LD   +  AT  + ++L ++    G    A+++  ++ V+G S  I      + 
Sbjct: 381 EMYEMGLDPNHVSYAT--IINSLFKS----GRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+ +     ++++ ++      N  T++ ++   CK  K+E A  +  +M K  + P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING----------- 298
           NV+ F+ IIN   + G L  A+ + R+M      +V+PN++ +  +I+G           
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREM---VQRNVMPNTIVYAILIDGYFKAGEQDVAD 551

Query: 299 -FCK-----------------------LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            FCK                       +GR++ A  +   M   GID ++  YA+LIDGY
Sbjct: 552 DFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGY 611

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G+   AL +  EM ++ +  + V YN+ I  L   G  +   +V S MI+  + PD 
Sbjct: 612 FKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDC 670

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN----------- 443
            TY+ +    C  G  + A  + N++    ++ +A +YNILI  LCK+            
Sbjct: 671 ITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFL 730

Query: 444 -------------------------NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
                                     L   K +L  M+ RG+  D++TY  LI GYC G 
Sbjct: 731 VKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGS 790

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA------KSLLQASQRIGLLD 532
           ++E A++ Y  M      PN+  YN+++ GL  +A L         K + + ++R  + +
Sbjct: 791 HVEKALKTYSQMFVDGIAPNITTYNTLLGGL-SNAGLMEEMMEETEKLVSEMNERGLVPN 849

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           A TY+ L++GY   G   +   +  EM   G       YN+LI+   K G   +AREL+ 
Sbjct: 850 AATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLN 909

Query: 593 VMILHGIIPDYVTYTTL 609
            ++  G IP+  TY  L
Sbjct: 910 DLLTKGRIPNSFTYDIL 926



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 163/338 (48%), Gaps = 23/338 (6%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY--KE 206
           + +L+    + G    A  ++Q++K K     + A+N  +  L++L   G++   Y    
Sbjct: 604 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL---GKYDPRYVCSR 660

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   +  T+N +I   C + K E+AL +   M   GI PN V +N++I   C+ G 
Sbjct: 661 MIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGF 720

Query: 267 L------EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           +      +F +K + +      D +L     H  ++    +L R +   +    M+K GI
Sbjct: 721 VPTPITHKFLVKAYSRSE--KADKILQ---IHEKLVASGLELKRQKVVLD---EMVKRGI 772

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG----DVE 376
             ++ TY  LI GY  G   E+AL+   +M   G+ PN   YN+ +  L   G     +E
Sbjct: 773 SADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMME 832

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
               ++S+M ++ + P+  TY IL  G  R G  K+   LH +++ +  V    +YN+LI
Sbjct: 833 ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 892

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +   KS  +  A++LL+ ++ +G IP+  TY  L  G+
Sbjct: 893 SDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGW 930



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 187/385 (48%), Gaps = 46/385 (11%)

Query: 283 DSV-LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA--------GIDCNVRTYATLIDG 333
           DS+ +P + TH   ++ FC L R+    + R++   A        G+   +  + TL+  
Sbjct: 46  DSIFIPPTKTH-LYVSFFCTLIRLYLTHD-RFSTASATFSHMRALGLVPTLPFWNTLLYQ 103

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL--SDMIDKHIC 391
           +   G   +   +  +M+  G++P+    N  +H L   GD++ AL  L  +D++D    
Sbjct: 104 FNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVD---- 159

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
            D+ TY+ +  G C+ G V Q F L +++++  +  D+ + NIL+   C+   +  A+ +
Sbjct: 160 IDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWV 219

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           + +++  G+  D+I   TLIDGYC+   +  A ++ EN  + + K ++V YN+++   CK
Sbjct: 220 MYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCK 279

Query: 512 DASLDAAKSLL-------QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
              L  A+SL        +   R+   D +T N                    E++N+  
Sbjct: 280 TGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN--------------------EIKNLQP 319

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            +  V Y  LI   CKF   +++  L K MI++GI+PD VT ++++  F ++    E   
Sbjct: 320 TL--VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLL 649
           L  +M   G+ P++ +Y  II+ L 
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLF 402



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 17/371 (4%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +FD L+    ++G  + A  +I  +  KG    I  + + +    K         + +E
Sbjct: 567 VIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V  +N +I  L +  K +    +  RM++ G+ P+ + +N IIN  C  G 
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGK 685

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-----GID 321
            E AL +  +M       ++PN+VT+N +I G CK G V      ++ ++KA       D
Sbjct: 686 TEDALDILNEM---KSYGIMPNAVTYNILIGGLCKTGFVPTPITHKF-LVKAYSRSEKAD 741

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             ++ +  L+   A G   +    + DEMVKRG+  + V YN+ I        VE AL  
Sbjct: 742 KILQIHEKLV---ASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKT 798

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF----KLHNQVLEEHMVGDAYSYNILIN 437
            S M    I P+  TY+ L  GL   G +++      KL +++ E  +V +A +Y+IL++
Sbjct: 799 YSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVS 858

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
              +  N      L   MI +G +P + TY  LI  Y K G +  A ++  ++    + P
Sbjct: 859 GYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIP 918

Query: 498 NLVIYNSIING 508
           N   Y+ +  G
Sbjct: 919 NSFTYDILTCG 929


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 250/495 (50%), Gaps = 6/495 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + TP +  F+ ++ +  ++     A  +  +L++KG    +   N  ++    + +I   
Sbjct: 54  RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFG 113

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +  +++  GY  +  T N +I  LC + ++++AL  + ++L  G   N V +  +IN 
Sbjct: 114 FSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 173

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++GD   A+K  RK+    G    P+ V +N II+  CK   V  A  +   M   GI
Sbjct: 174 VCKIGDTRAAIKFLRKI---DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGI 230

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY TLI G+   G  +EA+ L +EMV + + PN   YN  +  L  EG V+ A  
Sbjct: 231 SADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKS 290

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL+ M+   + PD  TYS L  G      VK+A  + N +    +  D ++Y ILIN  C
Sbjct: 291 VLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFC 350

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  L   M  + ++P I+TY +LIDG CK G I     + + M+   +  +++
Sbjct: 351 KNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVI 410

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEM 559
            Y+S+I+GLCK+  LD A +L    +   +   I T+  L++G    G++ +A  +F ++
Sbjct: 411 TYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL 470

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G  +N   YN++IN  CK G  ++A  ++  M  +G IP+  T+ T++    K    
Sbjct: 471 LTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDEN 530

Query: 620 EEVIELHDDMVLSGV 634
           ++  +L   M+  G+
Sbjct: 531 DKAEKLLRQMIARGL 545



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 229/444 (51%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M+   +   +  FN ++ +  K      A+SL +R+   GI P+++  N++IN  C 
Sbjct: 47  FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G + F   +  K   +      P++VT N +I G C  G+V+ A      ++  G   N
Sbjct: 107 MGQITFGFSVLAK---ILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +YATLI+G  + G +  A++   ++  R   P+ V+YN+ I  +     V  A  + S
Sbjct: 164 QVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFS 223

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K I  D  TY+ L  G C  G +K+A  L N+++ + +  + Y+YNIL++ LCK  
Sbjct: 224 EMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  AK +L+ M+   + PD+ITY TL+DGY     ++ A  V+  M  +   P++  Y 
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +ING CK+  +D A +L +   +  ++  I TY++LI+G   +G+I+  + +  EMR+ 
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   + + Y+ LI+ LCK G   +A  L   M    I P+  T+T L+    K    ++ 
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            E+  D++  G   +  TYN +I+
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMIN 487



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 201/418 (48%), Gaps = 39/418 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A+S + RML     P ++ FN I++   ++     A+ L  ++ +     + P+ +T
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL---KGIQPDLIT 96

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC +G++ F                                      +  +++
Sbjct: 97  LNILINCFCHMGQITFG-----------------------------------FSVLAKIL 121

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           KRG  P+ V  N+ I  L  +G V+ AL     ++ +    +  +Y+ L  G+C+ G  +
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A K   ++       D   YN +I+ +CK   ++ A  L S M V+G+  D++TY TLI
Sbjct: 182 AAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLI 241

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
            G+C  G ++ A+ +   M      PN+  YN +++ LCK+  +  AKS+L    +  + 
Sbjct: 242 YGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITY+TL++GYF+  ++ +A  +F+ M  +G+  +   Y ILIN  CK     +A  L
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            K M    ++P  VTY++L+    K+     V +L D+M   G   D  TY+++I  L
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 1/270 (0%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD  T +IL    C  G +   F +  ++L+     D  + N LI  LC    +  
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A      ++ +G   + ++Y TLI+G CK G+   A++    +     KP++V+YN+II+
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            +CK   +  A  L       G+  D +TYNTLI G+ I GK+ EA  + +EM    I  
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   YNIL++ LCK G  ++A+ ++ VM+   + PD +TY+TL+  +      ++   + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + M L GV+PD  TY  +I+     K  ++
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDE 357



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 15/255 (5%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A    N++L          +N +++   K  + + A  L   + ++G+ PD+IT   
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-----KSLLQA 524
           LI+ +C  G I     V   + K    P+ V  N++I GLC    +  A     K L Q 
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK---VGYNILINFLCKF 581
            Q    L+ ++Y TLING     KI +  A    +R +   + K   V YN +I+ +CK+
Sbjct: 160 FQ----LNQVSYATLINGV---CKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKY 212

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
               +A  L   M + GI  D VTY TL+  F      +E I L ++MVL  ++P+  TY
Sbjct: 213 QLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTY 272

Query: 642 NAIISPLLGEKSAED 656
           N ++  L  E   ++
Sbjct: 273 NILVDALCKEGKVKE 287



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 1/204 (0%)

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N+  A    + M+     P II +  ++D + K  +   AV +   ++    +P+L+  
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +IN  C    +    S+L    + G   D +T NTLI G  + G++ +A     ++  
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G  +N+V Y  LIN +CK G  + A + ++ +      PD V Y T++    K     E
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
              L  +M + G+S D  TYN +I
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLI 241


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 175/599 (29%), Positives = 286/599 (47%), Gaps = 27/599 (4%)

Query: 73  SPKLALEFYTWVGENNRFSHSL-ESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE- 130
            P++ LEF+ W  + +   + L E SC+ +  L+  RR    +  +  +M +  + P   
Sbjct: 43  DPEMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTRE 102

Query: 131 --------FLE-GLLDS--------YEICKATPAVF--DALVRACTQIGATEGAYDVIQK 171
                   F + GL+D          +I    P VF  ++L+    + G  E A  V  +
Sbjct: 103 AFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDE 162

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +  +   V  +     +  L K  ++   WKL ++    G + N+  +N +I   CK+  
Sbjct: 163 MVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGD 222

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
            E A  L+  +   G  P V  +  IIN  C+ G  E   KL  +M     D  +     
Sbjct: 223 TERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIH---I 279

Query: 292 HNCIINGFCKLG-RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           +N II+   K G R+E A+ + + MIK+G D ++ TY  LI G    G   +A +L ++ 
Sbjct: 280 YNNIIDAQFKHGCRIEAADTVGW-MIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQA 338

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +KRGL+PN V Y   IH    +G+   AL +L  M ++   PD  TY+ L  GL   G V
Sbjct: 339 IKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEV 398

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A  + N+++E+ ++ DA  YN+L++ LCK   L AAK LL+ M+ + + PD     TL
Sbjct: 399 DVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATL 458

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIG 529
           +DG+ + G+ E A +++E   +    P +V YN++I G CK   + DA     +  Q + 
Sbjct: 459 VDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLH 518

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D  TY+T+I+GY     +  A  MF  M       N V Y +LIN  C  G   +A +
Sbjct: 519 SPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEK 578

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             K M+   + P+ VTYT L+  F K  +  +     + M++    P++ TYN +++ L
Sbjct: 579 TFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL 637



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 256/529 (48%), Gaps = 18/529 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    + G TE A  + ++LK+KG   ++  +   ++   K  +     
Sbjct: 203 CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVD 262

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKE-CKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           KL  EM   G   +++ +N +I A  K  C++E A ++ + M+KSG  P++  +N++I  
Sbjct: 263 KLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGW-MIKSGCDPDMATYNILITG 321

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           +C  G++  A +L  +  +  G  +LPN V++  +I+ +CK G    A ++   M + G 
Sbjct: 322 SCSCGEVHKAEQLLEQ-AIKRG--LLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGH 378

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             ++ TYA LI G    G  + AL + ++MV++G++P+  +YN  +  L  +G +  A  
Sbjct: 379 KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKV 438

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L++M+D+++ PD F  + L  G  R+G  ++A KL    +E+ +      YN +I   C
Sbjct: 439 LLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYC 498

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A      MI     PD  TY T+IDGY K  ++ GA++++  M K   KPN+V
Sbjct: 499 KFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVV 558

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFING-KIAEAFAMFSEM 559
            Y  +ING C    ++ A+   +    + L   +   T++ G F  G  + +A + F +M
Sbjct: 559 TYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQM 618

Query: 560 RNVGIAVNKVGYNILINFLC---KFGCYQQARELMK---------VMILHGIIPDYVTYT 607
                  N V YN L+N L     F    Q  E  +         +MI  G      +Y 
Sbjct: 619 LMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYN 678

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +++    ++   +  + L D M+  G  PD  +  A++  L  E  ++D
Sbjct: 679 SILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQD 727



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 23/298 (7%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL++  +  G    V  +N +I   CK   +++AL  + RM++    P+   ++ II+  
Sbjct: 473 KLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGY 532

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            ++ DL  AL++F   G+M   +  PN VT+  +INGFC  G +  AE+    M+   + 
Sbjct: 533 IKMNDLHGALRMF---GLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLK 589

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD------- 374
            NV TY  LI  + +G +  +A    ++M+    +PN+V YN  ++ L    D       
Sbjct: 590 PNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQR 649

Query: 375 ---------VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
                    +E    ++SD  D+       +Y+ +   LC++  VK A  L ++++ +  
Sbjct: 650 SEQTENSLVLESFGMMISDGWDRRAA----SYNSILICLCQHKMVKHALHLRDKMMSKGF 705

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           + D  S   L++ LC          ++S  +    +   + Y   +D +   G    A
Sbjct: 706 LPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEA 763


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 242/494 (48%), Gaps = 33/494 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+ +      L ++M   G   N+ T+N++I   C+  ++  AL+L 
Sbjct: 84  SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
            +M+K G  P++V  + ++N  C    +  A+ L  +M  M    D++            
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                              PN VT+  ++NG CK G ++ A  +   M  A I+ NV  Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +T+ID   +    ++AL L  EM  +G+ PN + Y+S I  L        A  +LSDMI+
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I P+  T++ L     + G + +A KL++++++  +  D ++Y+ LIN  C  + L  
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK +   MI +   P+++TY TLI+G+CK   I+  V+++  M +     N V Y ++I+
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G  +    D A+ + +     G+   I TYNTL++G   NGK+ +A  +F  ++   +  
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               YNI+I  +CK G  +   +L   + L G+ PD + Y T+++ F +    EE   L 
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563

Query: 627 DDMVLSGVSPDNQT 640
             M   G  PD+ T
Sbjct: 564 RKMREDGPLPDSGT 577



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 236/469 (50%), Gaps = 9/469 (1%)

Query: 190 HLVKLNE-IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           H +KL++ IG    L+  MV    + ++  FN ++ A+ K  K +  +SL  +M + GI 
Sbjct: 62  HSMKLDDAIG----LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
            N+  +N++IN  C+   +  AL L  KM  +  +   P+ VT + ++NG+C   R+  A
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYE---PSIVTLSSLLNGYCHGKRISDA 174

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             +   M++ G   +  T+ TLI G      + EA+ L D MV+RG  PN V Y   ++ 
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L   GD++ A  +L+ M    I  +   YS +   LC+      A  L  ++  + +  +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +Y+ LI+ LC     + A +LLS MI R + P+++T+  LID + K G +  A ++Y+
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFING 547
            M K    P++  Y+S+ING C    LD AK + +    +    + +TYNTLING+    
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           +I E   +F EM   G+  N V Y  LI+   +      A+ + K M+  G+ P+ +TY 
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           TL+    KN   E+ + + + +  S + P   TYN +I  +      ED
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 241/504 (47%), Gaps = 26/504 (5%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNR---FSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
           N+++S   K  K  L     +GE  +    SH+L +   +++      +   AL L+G +
Sbjct: 89  NKLLSAIAKMKKFDL--VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146

Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
           M       +  L  LL+ Y  C     + DA+               ++ ++   G+   
Sbjct: 147 MKLGYEPSIVTLSSLLNGY--CHGK-RISDAVA--------------LVDQMVEMGYRPD 189

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
              +   +  L   N+      L   MV  G   N+ T+ +V+  LCK   ++ A +L  
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           +M  + I  NVV ++ +I+  C+    + AL LF +   M    V PN +T++ +I+  C
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE---MENKGVRPNVITYSSLISCLC 306

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
              R   A  +   MI+  I+ NV T+  LID + + G   EA +L DEM+KR + P+  
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            Y+S I+       ++ A  +   MI K   P+  TY+ L  G C+   + +  +L  ++
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            +  +VG+  +Y  LI+   ++ +   A+ +   M+  G+ P+I+TY TL+DG CK G +
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
           E A+ V+E +++ + +P +  YN +I G+CK   ++    L  +    G+  D I YNT+
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546

Query: 540 INGYFINGKIAEAFAMFSEMRNVG 563
           I+G+   G   EA A+F +MR  G
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDG 570



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 178/393 (45%), Gaps = 39/393 (9%)

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A+ LF   G M     LP+    N +++   K+ + +    +   M + GI  N+ T
Sbjct: 66  LDDAIGLF---GGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LI+ + R      AL L  +M+K G  P+ V                          
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIV-------------------------- 156

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                    T S L  G C    +  A  L +Q++E     D  ++  LI+ L   N  +
Sbjct: 157 ---------TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L+  M+ RG  P+++TYG +++G CK G+I+ A  +   M+  + + N+VIY+++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LCK    D A +L    +  G+  + ITY++LI+      + ++A  + S+M    I 
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V +N LI+   K G   +A +L   MI   I PD  TY++L+  F  +   +E   +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            + M+     P+  TYN +I+     K  ++ V
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 166/646 (25%), Positives = 310/646 (47%), Gaps = 61/646 (9%)

Query: 54  MAPSLTNSLVNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           +   L +  V  ++ E   +S  L++ F+  + +   F HS  S+  + H+L   RRF +
Sbjct: 43  LVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKE 102

Query: 113 ALLLMGNLMSAN-SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
             +++  L+    S S     E L +S+   ++T  V+D L+   +++   + +  +++K
Sbjct: 103 LQVILEQLLQEEGSGSASRLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKK 162

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +K +  +VS  ++N+ L H     E  + W +YKE+      +N +T++ V+  LC++ K
Sbjct: 163 MKDQNLNVSTQSYNSVLYH---FRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQK 215

Query: 232 LEEAL-----------------------------------SLYYRMLKSGIWPNVVCFNM 256
           LE+A+                                   S +  +LK G+ P+V   N+
Sbjct: 216 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 275

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +IN  C VG +  AL+L      M+   V P+SVT+N +  GF  LG +  A E+   M+
Sbjct: 276 LINGLCLVGSIAEALELASD---MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 332

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST-IHWLFAEGDV 375
             G+  +V TY  L+ G  + G+ +  L L  +M+ RG   N+++  S  +  L   G +
Sbjct: 333 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 392

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           + AL + + M    + PD   YSI+  GLC+ G    A  L++++ ++ ++ ++ ++  L
Sbjct: 393 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 452

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +  LC+   L  A+ LL S+I  G   DI+ Y  +IDGY K G IE A+++++ + +   
Sbjct: 453 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 512

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFA 554
            P++  +NS+I G CK  ++  A+ +L   +  GL  + ++Y TL++ Y   G       
Sbjct: 513 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 572

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKF----GC--------YQQARELMKVMILHGIIPD 602
           +  EM+  GI    V Y+++   LC+      C        +++ ++ ++ M   GI PD
Sbjct: 573 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 632

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +TY T++    +           + M    +   + TYN +I  L
Sbjct: 633 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 678



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 279/603 (46%), Gaps = 48/603 (7%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
           N V+  FR++ K+  + Y  + + N  ++S      +V  L   ++ +DA+L        
Sbjct: 176 NSVLYHFRETDKM-WDVYKEIKDKNEHTYS-----TVVDGLCRQQKLEDAVLF------- 222

Query: 124 NSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
                       L + E     P+V  F++++    ++G  + A      +   G   S+
Sbjct: 223 ------------LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 270

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           ++ N  ++ L  +  I    +L  +M   G   +  T+N++         +  A  +   
Sbjct: 271 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 330

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG---DSVLPNSVTHNCIING 298
           ML  G+ P+V+ + +++   CQ+G+++  L L + M +  G   +S++P SV    +++G
Sbjct: 331 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSG 385

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK GR++ A  +   M   G+  ++  Y+ +I G  + G  + AL L DEM  + ++PN
Sbjct: 386 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 445

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           +  + + +  L  +G +  A  +L  +I      D   Y+I+  G  ++GC+++A +L  
Sbjct: 446 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 505

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            V+E  +     ++N LI   CK+ N+A A+++L  + + GL P +++Y TL+D Y   G
Sbjct: 506 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 565

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLC------------KDASLDAAKSLLQASQ 526
           N +   ++   MK     P  V Y+ I  GLC            ++   +  K  L+  +
Sbjct: 566 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 625

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D ITYNT+I        ++ AF     M++  +  +   YNILI+ LC +G  +
Sbjct: 626 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 685

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A   +  +    +      YTTL+        PE  ++L   ++  G +   + Y+A+I
Sbjct: 686 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 745

Query: 646 SPL 648
           + L
Sbjct: 746 NRL 748



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 225/469 (47%), Gaps = 17/469 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L +    +G   GA++VI+ +  KG S  +  +   L    +L  I     L K+M
Sbjct: 307 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 366

Query: 208 VSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +S G+ + ++   ++++  LCK  +++EALSL+ +M   G+ P++V ++++I+  C++G 
Sbjct: 367 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 426

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + AL L+ +M       +LPNS TH  ++ G C+ G +  A  +  ++I +G   ++  
Sbjct: 427 FDMALWLYDEM---CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 483

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  +IDGYA+ G  EEAL L   +++ G+ P+   +NS I+      ++  A  +L  + 
Sbjct: 484 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 543

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK----- 441
              + P   +Y+ L       G  K   +L  ++  E +     +Y+++   LC+     
Sbjct: 544 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 603

Query: 442 -------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
                         KQ L  M   G+ PD ITY T+I   C+  ++ GA    E MK   
Sbjct: 604 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 663

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
              +   YN +I+ LC    +  A S + + Q   + L    Y TLI  + + G    A 
Sbjct: 664 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 723

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
            +F ++ + G  V+   Y+ +IN LC+     +++    +M+  GI PD
Sbjct: 724 KLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 174/435 (40%), Gaps = 88/435 (20%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLD-SYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
            +LL G     N    L  L+ +L   +E+    P     ++    + G  + A  +  +
Sbjct: 344 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC--SVMLSGLCKTGRIDEALSLFNQ 401

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +K  G S  + A++  +  L KL +      LY EM     + N  T   ++  LC++  
Sbjct: 402 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 461

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L EA SL   ++ SG   ++V +N++I+   + G +E AL+LF+   V+    + P+  T
Sbjct: 462 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK---VVIETGITPSVAT 518

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE--EALR---- 345
            N +I G+CK   +  A +I   +   G+  +V +Y TL+D YA  G+++  + LR    
Sbjct: 519 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 578

Query: 346 -----------------LCD------------------------EMVKRGLMPNNVVYNS 364
                            LC                         +M   G+ P+ + YN+
Sbjct: 579 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 638

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG---------------- 408
            I +L     + GA   L  M  +++     TY+IL   LC  G                
Sbjct: 639 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 698

Query: 409 ---------------CVK----QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
                          CVK     A KL +Q+L          Y+ +IN LC+ + +  +K
Sbjct: 699 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESK 758

Query: 450 QLLSSMIVRGLIPDI 464
                M+ +G+ PD+
Sbjct: 759 FFFCLMLSQGISPDL 773


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 282/588 (47%), Gaps = 37/588 (6%)

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM----SANSV 126
           R+SP +AL  +  +   +  ++S+   C            D A   +G ++    +A ++
Sbjct: 78  RESPAVALSLFNRMPRADLCTYSIVIGCC-----SRAGHLDLAFAALGRVIRTGWTAQAI 132

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +    L+GL       K T    D  +R    +G T  A+                ++N 
Sbjct: 133 TFSPLLKGLCHD----KRTSDAMDIALRRMPALGCTPNAF----------------SYNI 172

Query: 187 FLSHLVKLNEIGRFWKLYKEMVS----CGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            L  L   N   +   L   M++     G   +V ++  VI  L +E +L++A  L+  M
Sbjct: 173 LLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           L  G+ PN + +N +++  C  G  + A+ +FRKM     D V P+ VT+N ++   CK 
Sbjct: 233 LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKM---CRDGVEPDVVTYNTLMVYLCKN 289

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GR   A ++  +M+K G   +   Y TL+ GYA  G   +  +L D MV+ G  P++ ++
Sbjct: 290 GRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  I      G V+ A+   S M  + + P+  TY  +   LCR G V  A    ++++ 
Sbjct: 350 NILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           E +  +   +  LI+ LC  +    A++L   MI RG+ P+ I + TL++  CK G +  
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           A  +++ M +V+ + +++ Y ++I+G C D  +D A  LL+     G+  + +TYNT+IN
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           GY  NG+I +A ++F +M + G+    V Y+ +++ L +      A+EL   MI  GI  
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKL 589

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              TY  ++    +N   ++ + +  ++ L      N+T+N +I  LL
Sbjct: 590 PIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALL 637



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 218/445 (48%), Gaps = 9/445 (2%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL-FRK 276
           T+++VI    +   L+ A +   R++++G     + F+ ++   C       A+ +  R+
Sbjct: 98  TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRR 157

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI----KAGIDCNVRTYATLID 332
           M  +      PN+ ++N ++ G C   R + A  + + M+    + G   +V +Y T+I+
Sbjct: 158 MPALG---CTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  R G  ++A  L DEM+ +G+ PN + YN  +H   + G  + A+ +   M    + P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TY+ L   LC+NG   +A K+ + ++++    D+  Y  L++       L    QLL
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M+  G  PD   +  LI  Y K G ++ A+  +  M++    PN+V Y ++++ LC+ 
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +D A S        GL  + + + TLI+G     K  +A  +  EM   GI  N + +
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N L+N LCK G   +A+ +  +M+   +  D +TYTTL+  +  +   +E  +L + MVL
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514

Query: 632 SGVSPDNQTYNAIISPLLGEKSAED 656
            GV P+  TYN II+        ED
Sbjct: 515 DGVKPNEVTYNTIINGYCKNGRIED 539



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 157/354 (44%), Gaps = 14/354 (3%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGA 161
           +V +    DAL  +G +  A S       EGL         TP   VF  L+        
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGL---------TPNGVVFRTLIHGLCACDK 431

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            + A ++  ++  +G   +   +N  L+HL K   + R   ++  MV      +V T+  
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I   C + K++EA  L   M+  G+ PN V +N IIN  C+ G +E A  LFR+M   +
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQM---A 548

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              V P  V ++ I++G  +  R+  A+E+   MIK GI   + TY  ++ G  +   ++
Sbjct: 549 SKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTD 608

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +ALR+   +        N  +N  I  L   G  + A  + + ++ + + P+  TY ++ 
Sbjct: 609 DALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMM 668

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           K L   G +++   L   + +     D+   N L+  L +   +  A   LS +
Sbjct: 669 KSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKI 722


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 254/522 (48%), Gaps = 19/522 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C      ++ L+    + G       ++ ++++KG   ++  +   +  L + +++ +
Sbjct: 305 EGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTK 364

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L  EM   G   NV  +N VIYALCK     +AL++  +M+ S   P+VV FN +I 
Sbjct: 365 IESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIA 424

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ GD+E ALKL R+        + PN +++  +I+GFC  G V  A ++   MI  G
Sbjct: 425 AFCREGDVEEALKLLREA---IRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRG 481

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              +V T   LI G    G  +EAL + ++M +R +MP+  +YN  I  L  +  +  A 
Sbjct: 482 HTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAK 541

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L +M+++ + PD F Y+ L  G  R+  +  A K+   + E+    D  +YN +I   
Sbjct: 542 NLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGY 601

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CKS  +  A   +SSM   G IPD  TY TLIDGY K G+I+ A++   +M K   KPN+
Sbjct: 602 CKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNI 661

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V Y S+I G C   + D+A+ L  + Q  GL  + + Y  LI   F   K  +A A F  
Sbjct: 662 VTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEH 721

Query: 559 MRNVGIAVNKVGYNILINFL--CKFGC-------YQQAR------ELMKVMILHGIIPDY 603
           M     + N    + L+N L  C++G          QA       ++ K +I  G+ P  
Sbjct: 722 MLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRI 781

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             Y  ++    ++    + +EL + M   G  PD  T+ +++
Sbjct: 782 SAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLL 823



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 210/439 (47%), Gaps = 4/439 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G V     +N++I   C+   +   L L   M   GI P VV +  II+   +  DL   
Sbjct: 306 GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLT-- 363

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            K+   +  M    + PN   +N +I   CK      A  +   M+ +  D +V T+ TL
Sbjct: 364 -KIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTL 422

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I  + R G  EEAL+L  E ++R L PN + Y   IH     G+V  A  +L +MI +  
Sbjct: 423 IAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGH 482

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  T   L  GL  +G V +A  +  ++ E  ++ DA  YN+LI+ LCK   L+AAK 
Sbjct: 483 TPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKN 542

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           LL  M+ + + PD   Y TLIDG+ +   +  A +++E M++     ++V YN++I G C
Sbjct: 543 LLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYC 602

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   ++ A   + + +++G + D  TY TLI+GY   G I  A     +M       N V
Sbjct: 603 KSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIV 662

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  LI   C  G    A  L   M   G+ P+ V YT L+    K     +     + M
Sbjct: 663 TYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHM 722

Query: 630 VLSGVSPDNQTYNAIISPL 648
           +L+  SP++ T + +++ L
Sbjct: 723 LLNHCSPNDATMHYLVNGL 741



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 179/409 (43%), Gaps = 36/409 (8%)

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
           G+  +P +V +N +I+G+C+ G V     +   M   GI   V TY  +I    R     
Sbjct: 304 GEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLT 363

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +   L  EM +RGL PN  +YN+ I+ L        AL VL+ M+     PD  T++ L 
Sbjct: 364 KIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLI 423

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
              CR G V++A KL  + +   +  +  SY  LI+  C    +  A  LL  MI RG  
Sbjct: 424 AAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHT 483

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD++T G LI G    G ++ A+ V E M + +  P+  IYN +I+GLCK   L AAK+L
Sbjct: 484 PDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNL 543

Query: 522 LQA------------------------------------SQRIGLLDAITYNTLINGYFI 545
           L                                       ++ G  D + YN +I GY  
Sbjct: 544 LVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCK 603

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +G + EA    S MR VG   ++  Y  LI+   K G  + A   +  M+     P+ VT
Sbjct: 604 SGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVT 663

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           Y +L+  +    + +    L   M   G+ P+   Y  +I  L  +  A
Sbjct: 664 YASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKA 712



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 3/264 (1%)

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           D+    D ++  ++ +GLC  G V++  +L      E  V  A  YN+LI+  C+  ++ 
Sbjct: 269 DREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVG 328

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
               LL  M ++G++P ++TYG +I    +  ++     +   MK+    PN+ IYN++I
Sbjct: 329 RGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVI 388

Query: 507 NGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
             LCK  S   A ++L    + R    D +T+NTLI  +   G + EA  +  E     +
Sbjct: 389 YALCKCRSASQALAVLNQMVASRFDP-DVVTFNTLIAAFCREGDVEEALKLLREAIRREL 447

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N++ Y  LI+  C  G    A +L+  MI  G  PD VT   L+     +   +E + 
Sbjct: 448 EPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALM 507

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           + + M    V PD   YN +IS L
Sbjct: 508 VREKMAERQVMPDANIYNVLISGL 531



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 152/365 (41%), Gaps = 53/365 (14%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A D++ ++  +GH+  +      +  LV   ++     + ++M     + + N +N++I 
Sbjct: 470 ASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLIS 529

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK+  L  A +L   ML+  + P+   +  +I+   +   L  A K+F  M    G  
Sbjct: 530 GLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGG-- 587

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
              + V +N +I G+CK G +  A     +M K G   +  TY TLIDGYA+ G  + AL
Sbjct: 588 -YRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAAL 646

Query: 345 R-LCDEMVKR----------------------------------GLMPNNVVYNSTIHWL 369
           R LCD M +R                                  GL PN V Y   I  L
Sbjct: 647 RFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSL 706

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL--CRNGCVKQAFKLHNQVLEEHMVG 427
           F +     A      M+  H  P+  T   L  GL  CR G +       +Q  ++  + 
Sbjct: 707 FKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALL 766

Query: 428 DAY-------------SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           D +             +YN +I  LC+ N L  A +L   M  +G +PD +T+ +L+ G+
Sbjct: 767 DVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGF 826

Query: 475 CKGGN 479
              G 
Sbjct: 827 SSVGK 831



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 3/308 (0%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNS--TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           E A RL  EM+ R        Y++   +  L  EG VE    ++     +   P    Y+
Sbjct: 256 ECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYN 315

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           +L  G CR G V +   L  ++  + ++    +Y  +I++L + ++L   + LL  M  R
Sbjct: 316 VLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKER 375

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL P++  Y T+I   CK  +   A+ V   M      P++V +N++I   C++  ++ A
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL+ + R  L  + ++Y  LI+G+ + G++  A  +  EM   G   + V    LI+ 
Sbjct: 436 LKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHG 495

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L   G   +A  + + M    ++PD   Y  L++   K         L  +M+   V PD
Sbjct: 496 LVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPD 555

Query: 638 NQTYNAII 645
              Y  +I
Sbjct: 556 KFVYTTLI 563



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 3/181 (1%)

Query: 481 EGAVQVYENMKKVEKKPNLVIYNS--IINGLCKDASLDAAKSLLQASQRIGLLD-AITYN 537
           E A ++Y  M   +++     Y++  ++ GLC +  ++  + L++A    G +  A+ YN
Sbjct: 256 ECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYN 315

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LI+GY   G +     +  EM   GI    V Y  +I++L +     +   L+  M   
Sbjct: 316 VLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKER 375

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G+ P+   Y T++    K  S  + + + + MV S   PD  T+N +I+    E   E+ 
Sbjct: 376 GLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEA 435

Query: 658 V 658
           +
Sbjct: 436 L 436


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 265/545 (48%), Gaps = 6/545 (1%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           ++ + P L    ++RV+   +     AL F++WV  +     S+++ C +VH+L   + F
Sbjct: 82  VKHLLPHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEF 141

Query: 111 DDALLLMGNLMSANSVSPL--EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
            +A+  +  L+          +  + LL   + C   P +FD LV+A  + G  +  +  
Sbjct: 142 KEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTT 201

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
            +K+   G   S+ + N  L+ L+KLN I + W++YKEM   G   N  TFN++ +  C+
Sbjct: 202 FRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQ 261

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           +  +++      RM + G  P++V +N +I+  C+ G L+ A  L+R   +M   +VLP+
Sbjct: 262 DGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYR---IMYRRNVLPD 318

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            V++  ++NG CK G+V  A ++ + MI  G++ ++ ++ TLI GY + G   E+  L  
Sbjct: 319 LVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLH 378

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM+  G+ P+ V     I     E  +  AL ++ ++    +      Y  L   +C  G
Sbjct: 379 EMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEG 438

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A  L  ++ +   V     YN LI  LCKS+++A A  + S M  R + P  ITY 
Sbjct: 439 RPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYK 498

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQR 527
            LI   C+      A  + E M +    P+  I  ++++  CK+  +  A++LLQ  ++ 
Sbjct: 499 ALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKE 558

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
             + D+ +YNTL+  Y  +        +   M  VG A N   +  +I+ L K    ++ 
Sbjct: 559 FQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKD 618

Query: 588 RELMK 592
           + L++
Sbjct: 619 KLLLE 623



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 234/513 (45%), Gaps = 64/513 (12%)

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           V I AW+      +K        +L K +  C + E+V  F  +++  C++C        
Sbjct: 132 VHILAWSKEFKEAMKF-----LTELIKLVKDCSFNEDV--FQTLLFC-CQDCN------- 176

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
                    W  V+ F+M++    + G ++     FRK+ V  G   +P+ ++ NC++NG
Sbjct: 177 ---------WDPVI-FDMLVKAYVREGMIKEGFTTFRKI-VEVG--CVPSVISCNCLLNG 223

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
             KL R++   ++   M + GI  N  T+  L   + + G  ++     + M + G  P+
Sbjct: 224 LLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPD 283

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V YN+ I     +G ++ A ++   M  +++ PD  +Y+ L  GLC+ G V++A +L +
Sbjct: 284 IVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFH 343

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           +++   +  D  S+N LI   CK   +  ++ LL  MI  G+ PD +T   LI+GY K  
Sbjct: 344 RMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEA 403

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YN 537
            I  A+ +   +++     +  IY+ ++  +C++    AAKSLLQ   + G +  +  YN
Sbjct: 404 RIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYN 463

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LI     +  IA+A  + SEM +  I  + + Y  LI  LC+     +A  LM+ M+  
Sbjct: 464 KLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQS 523

Query: 598 GIIP-----------------------------------DYVTYTTLVTRFSKNCSPEEV 622
           G++P                                   D  +Y TLV  + ++     +
Sbjct: 524 GMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRL 583

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +EL D M+  G +P+ QT+  +I  L    + E
Sbjct: 584 MELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVE 616



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 19/335 (5%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  +++ Y  L+   A     +EA++   E++K       +V + +    F E   +  
Sbjct: 120 GLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIK-------LVKDCS----FNEDVFQTL 168

Query: 379 LFVLSDMIDKHICP-DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           LF   D      C  D   + +L K   R G +K+ F    +++E   V    S N L+N
Sbjct: 169 LFCCQD------CNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLN 222

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            L K N +    Q+   M   G+ P+  T+  L   +C+ G+++      E M++   +P
Sbjct: 223 GLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEP 282

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           ++V YN++I+  C+   LD A  L +   R  +L D ++Y  L+NG    GK+ EA  +F
Sbjct: 283 DIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLF 342

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             M + G+  + V +N LI   CK G  +++R L+  MI  GI PD VT   L+  + K 
Sbjct: 343 HRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKE 402

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
                 + L  ++   GV      Y+ ++  +  E
Sbjct: 403 ARIVSALNLVVELERFGVPISTDIYDYLMVSICEE 437


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 229/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M +  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HAPSVVTYNVLMNG 431



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 160/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++GA  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM   G A + V YN+L+N
Sbjct: 386 DTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMN 430



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 159/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G +P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMN 430



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+  A  +F EM   G+  N V +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    K    ++  +L D+M +
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 311 KGLKPDKFTYTTLI 324


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 257/540 (47%), Gaps = 61/540 (11%)

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           + KG+  S+  +N FL  L K N     ++ +++M   GY  +  T+++V+  LCK  +L
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           ++A  L  ++ +SG+  NV+ ++++I+  C+   ++ AL++F+ M   +G   +P+ VT 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS--AGGGCVPDVVTF 147

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++ G C   R+  A  +   M KAG + NV +Y+TL+DG  + G  +EA RL +EMV+
Sbjct: 148 NSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL-----TKG---- 403
           +  +P+ V Y S +  L     V  A      M+ K    D   +S +      KG    
Sbjct: 208 KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE 267

Query: 404 --------LCRNGCVKQAFKLHNQVLEEHMVGDAY------------------------- 430
                   LCR+G + +A K   +++  +    A                          
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 431 -------------SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
                        +YNI+++ LCK+  L  A++L++ M   GL PD++TY  L+DG CK 
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ-RIGLLDAITY 536
           G ++ A  + E M K    P+     SI+N L K   +D A S L+  + R    D +TY
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTL++G    G+I EA    ++M       +   Y I+I  LC+ G    A  + + M+ 
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK 507

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G++PD V Y +L+   ++N   +  +EL   +  S   PD   +  ++  L     AED
Sbjct: 508 RGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTSLCKPDFVMHKMVVDGLCKAGKAED 564



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 213/446 (47%), Gaps = 21/446 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+    + G  + A  + +++  K     + A+ +F++ L K N +    
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKE--------------CK---LEEALSLYYRMLK 244
              ++MV+ G   +   F+ VI  LCK+              C+   L+EA   +  M+ 
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
               P+   FN +I+  C+   L   + LF++M  M      PN  T+N +++  CK  +
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++ A+E+   M   G+  +V TY+ L+DG  + G  + A  L +EM K G+ P++    S
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++ L   G V+ AL  L  M  +   PD  TY+ L  GLC+ G + +A     +++   
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              D +SY I+I  LC+S   A A  +   M+ RG++PD + Y +L+DG  + G  + A+
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           ++   +K    KP+ V++  +++GLCK    + A  +++     G   DA TY  ++ G 
Sbjct: 535 EL---LKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGL 591

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKV 569
              GK+ +A  +  +      +V ++
Sbjct: 592 RKLGKVDKARQLVDDASETHTSVERL 617



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 243/535 (45%), Gaps = 57/535 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  ++R   + G  + A +++ +L+  G  +++  ++  +    K + +    +++K M
Sbjct: 75  TYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTM 134

Query: 208 -VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
               G V +V TFN ++  LC   ++ EA  L+  M K+G  PNV+ ++ +++  C+ G 
Sbjct: 135 SAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR 194

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A +L+ +M      S +P+ V +   + G CK  RV  A +    M+  G   +   
Sbjct: 195 LDEACRLWEEM---VEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251

Query: 327 YATLI-----DGYA------------RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           ++T+I      G+A            R G  +EA +  +EM+ R   P+  ++N+ IH +
Sbjct: 252 FSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAV 311

Query: 370 FAEGDVEGALFVLSDM--IDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
                +   + +   M  + +  CP +  TY+I+   LC+   + +A +L N++    + 
Sbjct: 312 CKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLS 371

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +Y+ L++ LCK   L  A  LL  M   G+ PD  T  ++++   K G ++ A+  
Sbjct: 372 PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSH 431

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFI 545
            E MK     P+LV YN++++GLCK   +D A + L          D  +Y  +I     
Sbjct: 432 LETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCR 491

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYN--------------------------------I 573
           +G+ A A A+F EM   G+  + V Y+                                +
Sbjct: 492 SGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKM 551

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           +++ LCK G  + A E+++ M   G   D  TY  +V    K    ++  +L DD
Sbjct: 552 VVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 279/579 (48%), Gaps = 25/579 (4%)

Query: 53  QMAPSLTNSL----VNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           Q  PSL +SL    V+ ++S    + +  L+F+ ++   N +   L +   ++  L   R
Sbjct: 43  QTTPSLLSSLNSQTVHLILSNHILTAESCLDFFHFI-RKNYYKPDLRAYITLIFKLYRSR 101

Query: 109 RFD-----DALLLMGNLMSANSVS-----PLEFLEGLLDSY------EICKATPAVFDAL 152
           + D          + +L +  +V      P+  +  L+D           K     FD L
Sbjct: 102 KSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLL 161

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
            R          A +  + ++ KG  +   +   +L  L +  ++    + ++ MV+   
Sbjct: 162 FRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDV 221

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
              V +  +V+  LCK   +E    L   +   G+  NVV +N  I    +  DL    +
Sbjct: 222 EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE 281

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +   + +M  + V  N VT+  +I+GF  +G++E A+ +   M + GI+ +V  Y ++I 
Sbjct: 282 I---LTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 338

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              R G+ + AL L DEM  +GL+P+   Y + IH +   G +E A  ++++M  K I  
Sbjct: 339 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 398

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +   ++ L  G C +G V +A +L   + ++ +  D ++YN + + LCK N    AK LL
Sbjct: 399 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 458

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
            SM+ RG+ P+ +++ TLID YCK GN   A +V+  M++    PN++ YN +I+G  K 
Sbjct: 459 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 518

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
            ++  A  L    +  GL+ D  T  +LI+G  I+GK+  A  +F EM   G+  N V Y
Sbjct: 519 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTY 578

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             +I+ L K G  ++A +L   M   G+ PD   Y++LV
Sbjct: 579 TAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 228/474 (48%), Gaps = 45/474 (9%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L+           EAL  +  M K G   +     + +    + G ++  L+ FR+M 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRM- 216

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG- 337
           V     V   S+T   +++G CK G VE   ++   +   G+  NV TY   I+GY +  
Sbjct: 217 VNLDVEVTVYSLT--IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 274

Query: 338 --GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G   E L L   M K G+  N V Y   IH     G +E A  +  +M +K I  D +
Sbjct: 275 DLGGVAEILTL---MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 331

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+ +    CR+G VK+A  L +++ ++ ++  A++Y  LI+ +CK+  + AA+ L++ M
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 391

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
             +G+  + + + TLIDGYC+ G ++ A+++   M+K   + ++  YNSI +GLCK    
Sbjct: 392 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 451

Query: 516 DAAKSLL------------------------------------QASQRIGLLDAITYNTL 539
           D AK LL                                    +  ++  + + ITYN L
Sbjct: 452 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 511

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GY   G + EA  +  E+ N G+  +      LI+  C  G    A +L   M   G+
Sbjct: 512 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 571

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           +P+ VTYT +++  SK+   EE  +L+D+M  +G++PD+  Y++++  L   +S
Sbjct: 572 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAES 625



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 189/385 (49%), Gaps = 38/385 (9%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E    ++ ++  KG   ++  +N F+    K  ++G   ++   M   G   NV T+
Sbjct: 239 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 298

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            L+I+      K+EEA  L+  M + GI  +V  +  II+  C+ G+++ AL LF +M  
Sbjct: 299 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM-- 356

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            +   ++P++ T+  +I+G CK G++E A+ +   M   GID N   + TLIDGY   G 
Sbjct: 357 -TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 415

Query: 340 SEEALRL-----------------------C-----DE-------MVKRGLMPNNVVYNS 364
            +EALRL                       C     DE       MV+RG+ PN + + +
Sbjct: 416 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I     EG+   A  V  +M +K   P+  TY++L  G  + G +K+A KL +++    
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           ++ D Y+   LI+  C    +  A +L   M  RGL+P+++TY  +I G  K G  E A 
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595

Query: 485 QVYENMKKVEKKPNLVIYNSIINGL 509
           ++Y+ MK+    P+  +Y+S++  L
Sbjct: 596 KLYDEMKETGLTPDDTVYSSLVGSL 620


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 247/514 (48%), Gaps = 35/514 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+ +      L ++M     V  + T+N++I   C+  ++  AL+L 
Sbjct: 84  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
            +M+K G  P++V  + ++N  C    +  A+ L  +M  M    D++            
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                              PN VT+  ++NG CK G  + A  +   M  A I+ +V  +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID   +    ++AL L  EM  +G+ PN V Y+S I  L + G    A  +LSDMI+
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I P+  T++ L     + G   +A KL++ +++  +  D ++YN L+N  C  + L  
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AKQ+   M+ +   PD++TY TLI G+CK   +E   +++  M       + V Y ++I 
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL  D   D A+ + +     G+  D +TY+ L++G   NGK+ +A  +F  M+   I +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y  +I  +CK G      +L   + L G+ P+ VTY T+++        +E   L 
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563

Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
             M   G  P++ TYN +I   L  G+K+A  ++
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 224/463 (48%), Gaps = 33/463 (7%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++ K+   G+  SI   ++ L+       I     L  +MV  GY  +  TF  +I+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV----- 279
            L    K  EA++L  RM++ G  PN+V + +++N  C+ GD + AL L  KM       
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258

Query: 280 ---------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
                                      M    + PN VT++ +I+  C  GR   A ++ 
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             MI+  I+ N+ T+  LID + + G   EA +L D+M+KR + P+   YNS ++     
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             ++ A  +   M+ K   PD  TY+ L KG C++  V+   +L  ++    +VGD  +Y
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             LI  L    +   A+++   M+  G+ PDI+TY  L+DG C  G +E A++V++ M+K
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
            E K ++ IY ++I G+CK   +D    L  +    G+  + +TYNT+I+G      + E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           A+A+  +M+  G   N   YN LI    + G    + EL++ M
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 216/421 (51%), Gaps = 4/421 (0%)

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + KL++A+ L+  M+KS   P++V FN +++   ++   +  + L  KM  +    ++  
Sbjct: 63  DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE---IVHG 119

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T+N +IN FC+  ++  A  +   M+K G + ++ T ++L++GY  G    +A+ L D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +MV+ G  P+ + + + IH LF       A+ ++  M+ +   P+  TY ++  GLC+ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A  L N++    +  D   +N +I+ LCK  ++  A  L   M  +G+ P+++TY 
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +LI   C  G    A Q+  +M + +  PNLV +N++I+   K+     A+ L     + 
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
            +  D  TYN+L+NG+ ++ ++ +A  MF  M +     + V YN LI   CK    +  
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            EL + M   G++ D VTYTTL+     +   +   ++   MV  GV PD  TY+ ++  
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479

Query: 648 L 648
           L
Sbjct: 480 L 480



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 204/412 (49%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G T+ A +++ K++       +  +N  +  L K   +    
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I PN+V FN +I+  
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G    A KL+  M   S D   P+  T+N ++NGFC   R++ A+++   M+     
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSID---PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY TLI G+ +    E+   L  EM  RGL+ + V Y + I  LF +GD + A  V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC NG +++A ++ + + +  +  D Y Y  +I  +CK
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P+++TY T+I G C    ++ A  + + MK+    PN   
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +    +   +   L+     +G++ ++F
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 629


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 247/514 (48%), Gaps = 35/514 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS + K+ +      L ++M     V  + T+N++I   C+  ++  AL+L 
Sbjct: 46  SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 105

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
            +M+K G  P++V  + ++N  C    +  A+ L  +M  M    D++            
Sbjct: 106 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 165

Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                              PN VT+  ++NG CK G  + A  +   M  A I+ +V  +
Sbjct: 166 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 225

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID   +    ++AL L  EM  +G+ PN V Y+S I  L + G    A  +LSDMI+
Sbjct: 226 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I P+  T++ L     + G   +A KL++ +++  +  D ++YN L+N  C  + L  
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AKQ+   M+ +   PD++TY TLI G+CK   +E   +++  M       + V Y ++I 
Sbjct: 346 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 405

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL  D   D A+ + +     G+  D +TY+ L++G   NGK+ +A  +F  M+   I +
Sbjct: 406 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 465

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y  +I  +CK G      +L   + L G+ P+ VTY T+++        +E   L 
Sbjct: 466 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 525

Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
             M   G  P++ TYN +I   L  G+K+A  ++
Sbjct: 526 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 559



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 224/463 (48%), Gaps = 33/463 (7%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++ K+   G+  SI   ++ L+       I     L  +MV  GY  +  TF  +I+
Sbjct: 101 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 160

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV----- 279
            L    K  EA++L  RM++ G  PN+V + +++N  C+ GD + AL L  KM       
Sbjct: 161 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 220

Query: 280 ---------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
                                      M    + PN VT++ +I+  C  GR   A ++ 
Sbjct: 221 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 280

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             MI+  I+ N+ T+  LID + + G   EA +L D+M+KR + P+   YNS ++     
Sbjct: 281 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 340

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             ++ A  +   M+ K   PD  TY+ L KG C++  V+   +L  ++    +VGD  +Y
Sbjct: 341 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 400

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             LI  L    +   A+++   M+  G+ PDI+TY  L+DG C  G +E A++V++ M+K
Sbjct: 401 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 460

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
            E K ++ IY ++I G+CK   +D    L  +    G+  + +TYNT+I+G      + E
Sbjct: 461 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 520

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           A+A+  +M+  G   N   YN LI    + G    + EL++ M
Sbjct: 521 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 216/421 (51%), Gaps = 4/421 (0%)

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + KL++A+ L+  M+KS   P++V FN +++   ++   +  + L  KM  +    ++  
Sbjct: 25  DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE---IVHG 81

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T+N +IN FC+  ++  A  +   M+K G + ++ T ++L++GY  G    +A+ L D
Sbjct: 82  LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 141

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           +MV+ G  P+ + + + IH LF       A+ ++  M+ +   P+  TY ++  GLC+ G
Sbjct: 142 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 201

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A  L N++    +  D   +N +I+ LCK  ++  A  L   M  +G+ P+++TY 
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +LI   C  G    A Q+  +M + +  PNLV +N++I+   K+     A+ L     + 
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
            +  D  TYN+L+NG+ ++ ++ +A  MF  M +     + V YN LI   CK    +  
Sbjct: 322 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 381

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            EL + M   G++ D VTYTTL+     +   +   ++   MV  GV PD  TY+ ++  
Sbjct: 382 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 441

Query: 648 L 648
           L
Sbjct: 442 L 442



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 204/412 (49%), Gaps = 3/412 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  +V    + G T+ A +++ K++       +  +N  +  L K   +    
Sbjct: 183 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 242

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   NV T++ +I  LC   +  +A  L   M++  I PN+V FN +I+  
Sbjct: 243 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G    A KL+  M   S D   P+  T+N ++NGFC   R++ A+++   M+     
Sbjct: 303 VKEGKFVEAEKLYDDMIKRSID---PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 359

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY TLI G+ +    E+   L  EM  RGL+ + V Y + I  LF +GD + A  V
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+   + PD  TYSIL  GLC NG +++A ++ + + +  +  D Y Y  +I  +CK
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 479

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +     L  S+ ++G+ P+++TY T+I G C    ++ A  + + MK+    PN   
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 539

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D    A+  L++  +    +   +   L+     +G++ ++F
Sbjct: 540 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 591


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 230/473 (48%), Gaps = 9/473 (1%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           H      +   +  L K   +    ++ +EMVS  +V +  T  +V+ +LC   ++++A 
Sbjct: 35  HPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 94

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            L   ML  G+  N + ++ +++  C+   L+ A+ L      M+     P  VT+N II
Sbjct: 95  ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVE---TMAERGCAPTVVTYNSII 151

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            GFC+  RV+ A      M+  G   ++ TY  LI G+ +       L L  E+ +RG  
Sbjct: 152 TGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFT 211

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ V Y++ I  L   G +  A+ +  +M      P   TY+ L  G CR G + +A +L
Sbjct: 212 PDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRL 268

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             +++++    D  +Y  L++  CK   L  A +L   M+   L PD++T+ +L+DG C 
Sbjct: 269 LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCG 328

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
            G +E A+++ E + +    P +  YN +++G CK   +  A+ L+   +  G + + +T
Sbjct: 329 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVT 388

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVG--IAVNKVGYNILINFLCKFGCYQQARELMKV 593
           YN L+ G    G+  +A     ++ + G     +   Y I+++ LC+ G    A +  + 
Sbjct: 389 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           MI  G +P   T+ T+V    K   P++  EL ++M+  G +P   T +A++S
Sbjct: 449 MIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 501



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 195/399 (48%), Gaps = 8/399 (2%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P  +  N++I   C+ G L  AL ++R+M     D+  P+ +T+  +++G  K  R+  A
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMN----DAHPPDFLTYTKLVHGLSKARRLRDA 58

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            ++   M+ A    +  T   ++     G   ++A  L +EM+ RG+  N + Y++ +  
Sbjct: 59  VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L     ++ A+ ++  M ++   P   TY+ +  G CR   V +A     Q++ E    D
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +Y  LI   CKS ++    +LL  +  RG  PDI+TY T+IDG CK G +  AV ++E
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFING 547
            M      P  + YNS+I G C+   +D A  LL +        D +TY TL++ +   G
Sbjct: 239 EMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ +A+ +F +M    ++ + V +  L++ LC  G  + A EL++ +   G  P   TY 
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            +V  + K     +  EL  D    G  P+  TYN +++
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVA 394



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/540 (23%), Positives = 245/540 (45%), Gaps = 28/540 (5%)

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
           L N V+    ++ +L      +   N+       +   +VH L   RR  DA+ ++  ++
Sbjct: 7   LHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
           SA  V     L  ++ S  +C                    + A ++++++  +G + + 
Sbjct: 67  SARHVPDNTTLTVVVQS--LCLGD---------------RVDDARELVEEMLHRGMAANA 109

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             ++  +  L K   +     L + M   G    V T+N +I   C+  +++EA     +
Sbjct: 110 ITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQ 169

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M+  G  P+++ +  +I   C+  D+   L+L   +G ++     P+ VT++ +I+G CK
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLEL---LGEVTRRGFTPDIVTYSTVIDGLCK 226

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR+  A +I   M  A       TY +LI GY R G  +EA+RL  +MV     P+ V 
Sbjct: 227 AGRLRDAVDIFEEMSCAP---TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVT 283

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y + +      G ++ A  +   M+   + PD  T++ L  GLC  G ++ A +L  ++ 
Sbjct: 284 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 343

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                   Y+YN +++  CK+N +  A++L++    RG +P+ +TY  L+ G C+ G  +
Sbjct: 344 RRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 403

Query: 482 GAVQVYENMKKVEKKP---NLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYN 537
            A+Q  + +   E  P   ++ +Y  I++ LC+D   D A    +   QR  +  A T+ 
Sbjct: 404 QALQYLDQLNS-EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T++       +  +A  +  EM   G        + +++  C+ G  Q+A EL   + L+
Sbjct: 463 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 522



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 205/428 (47%), Gaps = 9/428 (2%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+VI  LC+  +L  AL +Y R +     P+ + +  +++   +   L  A+++ ++M  
Sbjct: 9   NVVIGGLCRAGRLRHALGVY-RQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEM-- 65

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +S   V P++ T   ++   C   RV+ A E+   M+  G+  N  TY+ L+DG  +   
Sbjct: 66  VSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 124

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA+ L + M +RG  P  V YNS I        V+ A   +  M+ +   PD  TY+ 
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C++  V +  +L  +V       D  +Y+ +I+ LCK+  L  A  +   M    
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---S 241

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P  ITY +LI GYC+ G+++ A+++   M   +  P++V Y ++++  CK   LD A 
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L Q      L  D +T+ +L++G    G++ +A  +  E+   G       YN +++  
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 361

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM-VLSGVSPD 637
           CK    ++A EL+      G +P+ VTY  LV    +    ++ ++  D +    G  P 
Sbjct: 362 CKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 421

Query: 638 NQTYNAII 645
           +    AII
Sbjct: 422 SVAMYAII 429



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 175/371 (47%), Gaps = 40/371 (10%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P ++ HN +I G C+ GR      +R+A+   G+      Y  + D +            
Sbjct: 3   PGTLLHNVVIGGLCRAGR------LRHAL---GV------YRQMNDAHP----------- 36

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
                     P+ + Y   +H L     +  A+ VL +M+     PD+ T +++ + LC 
Sbjct: 37  ----------PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCL 86

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
              V  A +L  ++L   M  +A +Y+ L++ LCK   L  A  L+ +M  RG  P ++T
Sbjct: 87  GDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVT 146

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y ++I G+C+   ++ A    E M      P+++ Y ++I G CK   +     LL    
Sbjct: 147 YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R G   D +TY+T+I+G    G++ +A  +F EM     A   + YN LI   C+ G   
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMD 263

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L+  M+     PD VTYTTL++ F K    ++  EL   MV + +SPD  T+ +++
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323

Query: 646 SPLLGEKSAED 656
             L GE   ED
Sbjct: 324 DGLCGEGRMED 334



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 2/228 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +N++I  LC++  L  A  +   M      PD +TY  L+ G  K   +  AVQV + M 
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
                P+      ++  LC    +D A+ L++     G+  +AITY+ L++G     ++ 
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EA A+   M   G A   V YN +I   C+     +A   M+ M+  G  PD +TYT L+
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             F K+      +EL  ++   G +PD  TY+ +I  L       D V
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 279/579 (48%), Gaps = 25/579 (4%)

Query: 53  QMAPSLTNSL----VNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           Q  PSL +SL    V+ ++S    + +  L+F+ ++   N +   L +   ++  L   R
Sbjct: 47  QTTPSLLSSLNSQTVHLILSNHILTAESCLDFFHFI-RKNYYKPDLRAYITLIFKLYRSR 105

Query: 109 RFD-----DALLLMGNLMSANSVS-----PLEFLEGLLDSY------EICKATPAVFDAL 152
           + D          + +L +  +V      P+  +  L+D           K     FD L
Sbjct: 106 KSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDACNESKCNRAKFKEKFFDLL 165

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
            R          A +  + ++ KG  +   +   +L  L +  ++    + ++ MV+   
Sbjct: 166 FRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDV 225

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
              V +  +V+  LCK   +E    L   +   G+  NVV +N  I    +  DL    +
Sbjct: 226 EVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE 285

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +   + +M  + V  N VT+  +I+GF  +G++E A+ +   M + GI+ +V  Y ++I 
Sbjct: 286 I---LTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIIS 342

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              R G+ + AL L DEM  +GL+P+   Y + IH +   G +E A  ++++M  K I  
Sbjct: 343 CNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDL 402

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +   ++ L  G C +G V +A +L   + ++ +  D ++YN + + LCK N    AK LL
Sbjct: 403 NPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLL 462

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
            SM+ RG+ P+ +++ TLID YCK GN   A +V+  M++    PN++ YN +I+G  K 
Sbjct: 463 FSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKR 522

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
            ++  A  L    +  GL+ D  T  +LI+G  I+GK+  A  +F EM   G+  N V Y
Sbjct: 523 GNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTY 582

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             +I+ L K G  ++A +L   M   G+ PD   Y++LV
Sbjct: 583 TAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 226/469 (48%), Gaps = 45/469 (9%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L+           EAL  +  M K G   +     + +    + G ++  L+ FR+M 
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRM- 220

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG- 337
           V     V   S+T   +++G CK G VE   ++   +   G+  NV TY   I+GY +  
Sbjct: 221 VNLDVEVTVYSLT--IVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 278

Query: 338 --GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
             G   E L L   M K G+  N V Y   IH     G +E A  +  +M +K I  D +
Sbjct: 279 DLGGVAEILTL---MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 335

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+ +    CR+G VK+A  L +++ ++ ++  A++Y  LI+ +CK+  + AA+ L++ M
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM 395

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
             +G+  + + + TLIDGYC+ G ++ A+++   M+K   + ++  YNSI +GLCK    
Sbjct: 396 QGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRK 455

Query: 516 DAAKSLL------------------------------------QASQRIGLLDAITYNTL 539
           D AK LL                                    +  ++  + + ITYN L
Sbjct: 456 DEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVL 515

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GY   G + EA  +  E+ N G+  +      LI+  C  G    A +L   M   G+
Sbjct: 516 IDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGL 575

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +P+ VTYT +++  SK+   EE  +L+D+M  +G++PD+  Y++++  L
Sbjct: 576 VPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 198/403 (49%), Gaps = 42/403 (10%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E    ++ ++  KG   ++  +N F+    K  ++G   ++   M   G   NV T+
Sbjct: 243 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 302

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            L+I+      K+EEA  L+  M + GI  +V  +  II+  C+ G+++ AL LF +M  
Sbjct: 303 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM-- 360

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            +   ++P++ T+  +I+G CK G++E A+ +   M   GID N   + TLIDGY   G 
Sbjct: 361 -TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 419

Query: 340 SEEALRL-----------------------C-----DE-------MVKRGLMPNNVVYNS 364
            +EALRL                       C     DE       MV+RG+ PN + + +
Sbjct: 420 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I     EG+   A  V  +M +K   P+  TY++L  G  + G +K+A KL +++    
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           ++ D Y+   LI+  C    +  A +L   M  RGL+P+++TY  +I G  K G  E A 
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL-LQASQ 526
           ++Y+ MK+    P+  +Y+S++  L    S D + S+ +Q SQ
Sbjct: 600 KLYDEMKETGLTPDDTVYSSLVGSL---HSADESISMQIQGSQ 639


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 288/606 (47%), Gaps = 46/606 (7%)

Query: 58  LTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDA---- 113
           +T  L  +++     + +L + F+ WV   + + + L+    ++ +LV+   F  A    
Sbjct: 1   MTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAV 60

Query: 114 -LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
            LL+     S N V  L                             +GA +G  ++    
Sbjct: 61  VLLIQECEDSENGVVKL-----------------------------MGALDGMTEL---- 87

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
              G  +S   ++  L  L KLN     + +Y+ MV+ G+V     +  V+ ALCK   +
Sbjct: 88  ---GFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFV 144

Query: 233 EEALSLYYRMLKSGIWPNV-VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + A     ++L+ G   +  VC ++++   C+  DL  A ++F KM     +S  PNSVT
Sbjct: 145 QAAEMFCCKVLRLGFGLDTHVCTSLVLAN-CRRDDLGEAFRVFEKMS--KEESCRPNSVT 201

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ +I+G C+ GR+E A +++  M++ G   + RTY  LI      G +++A+++ DEM 
Sbjct: 202 YSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMA 261

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +  +PN   Y   I  L  EG +E A  V   M+   +CP   T++ L  G C+ G V 
Sbjct: 262 TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVV 321

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            AF+L + + + +   +  +YN L+  LC+ +    A  LL  ++  GL+PD +TY  L+
Sbjct: 322 SAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILV 381

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG+CK G +  A  ++ +M     +P+   + ++I+GLCK   L+ A  +L +  + G+ 
Sbjct: 382 DGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGIS 441

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           LD +T+  LI+G+   GK  +   +F  M           +N  ++ L K     +A  +
Sbjct: 442 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAM 501

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M+ +G++P  VT+T L+    +       +++ + M  +G SP+  TY  II+ L  
Sbjct: 502 LGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCN 561

Query: 651 EKSAED 656
               E+
Sbjct: 562 NGRVEE 567



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 218/438 (49%), Gaps = 4/438 (0%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C+     +  L+    + G  E A+ + Q++  KG   S   +   +     +    +
Sbjct: 193 ESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDK 252

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             K+  EM +   V NV+T+ ++I  LC+E K+EEA  ++ +MLK G+ P ++ FN +IN
Sbjct: 253 AMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALIN 312

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G   + +  F+ + VM   +  PN  T+N ++ G C++ +   A  +   ++  G
Sbjct: 313 GYCKEG---WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +  TY  L+DG+ + G    A  + + M   GL P+   + + I  L   G +E A 
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 429

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L  M+ K I  D  T++ L  G C+ G  K    L   ++E   +  A+++N  ++ L
Sbjct: 430 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 489

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K   L  A  +L  M+  GL+P ++T+  LI+G+C+ G    ++++ E MK+    PN+
Sbjct: 490 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNV 549

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             Y  IINGLC +  ++ A+++L +    G+  +  TY  L+  +   G++  AF + S 
Sbjct: 550 YTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 609

Query: 559 MRNVGIAVNKVGYNILIN 576
           M   G   N   Y+ L++
Sbjct: 610 MVKNGCQPNSHIYSALLS 627



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 134/557 (24%), Positives = 256/557 (45%), Gaps = 51/557 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ +   +  L++A   IG T+ A  ++ ++  K    ++H +   +  L +  +I    
Sbjct: 230 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEAN 289

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKE-------------------------------- 229
            ++++M+  G    + TFN +I   CKE                                
Sbjct: 290 GVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGL 349

Query: 230 CKLEE---ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C++ +   A  L  R++ +G+ P+ V +N++++  C+ G L  A  +F  M   +   + 
Sbjct: 350 CRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSM---NSAGLE 406

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+  T   +I+G CKLGR+E A  I  +M+K GI  +  T+  LIDG+ + G +++   L
Sbjct: 407 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 466

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            + MV+   +     +N  +  L  +  +  A  +L  M+   + P   T++IL +G CR
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G    + K+  ++ +     + Y+Y I+IN LC +  +  A+ +L SM   G+ P+  T
Sbjct: 527 AGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFT 586

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  L+  + K G ++ A Q+   M K   +PN  IY+++++G     +   A++L     
Sbjct: 587 YAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL----S 642

Query: 527 RIGLLDAITY-------NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             G LDA +        N L +  F    +  A  +  E++  G+    + YN L+  LC
Sbjct: 643 STGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLC 701

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A +L + M+ HG+ PD    ++++  + K C  +  +E    ++ +   P   
Sbjct: 702 KEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFA 760

Query: 640 TYNAIISPLLGEKSAED 656
           +Y  +I  L  E   ++
Sbjct: 761 SYCWVIHGLRNEGRVQE 777


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 246/524 (46%), Gaps = 43/524 (8%)

Query: 165 AYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKL--YKEMVSCGYVENVNTFNL 221
           A  ++   + +GH   S+ A N  LS L +         L  ++ +++     N  TFNL
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +++  C +  L +ALS    M   G+ P+VV +N ++   C+ G L  A  L  +M    
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM---K 272

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
            + + P   T+N +++ + +LG ++ A  +  AM   G + ++ TY  L  G  + G  +
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 342 EALRLCDEMVKRGLM-PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           EA +L DEM    ++ P+ V YN+ +   F       AL +L +M DK +     T++I+
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA------------ 448
            KGLCR G +++A      + EE +  D  +YN LI+  CK+ N+A A            
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452

Query: 449 -----------------------KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
                                  ++LL S   RG +PD ++YGT++  Y K    E A+ 
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALY 512

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYF 544
           +++ M K +  P++  YN++I GLC    L  A   L    + GL+ D  TYN +I+ Y 
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G + +AF   ++M       + V  N L+N LC  G  ++A +L +     G   D +
Sbjct: 573 KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVI 632

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           TY TL+    K+   +  +    DM   G+ PD  TYN ++S L
Sbjct: 633 TYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 244/504 (48%), Gaps = 41/504 (8%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T A ++ LV A  ++G  + A +V++ +   G    +  +N   + L +  ++   +KL 
Sbjct: 279 TRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLK 338

Query: 205 KEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
            EM     V  +V T+N ++ A  K  +  +AL+L   M   G+  ++V  N+++   C+
Sbjct: 339 DEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCR 398

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G LE AL    ++ +M+ + + P+ +T+N +I+ +CK   V  A  +   M+++G+  +
Sbjct: 399 EGQLEEALG---RLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             T  TL+    +    EEA  L     +RG +P+ V Y + +   F E   E AL++  
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWD 515

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  + + P  +TY+ L KGLC  G + +A    N+++++ +V D  +YNI+I+  CK  
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +L  A Q  + M+     PD++T  TL++G C  G +E A++++E+  +  KK +++ YN
Sbjct: 576 DLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYN 635

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  LCKD  +D A       +  GL  DA TYN +++     G+  EA  M  ++   
Sbjct: 636 TLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDES 695

Query: 563 GIAVNKVGYNIL------------------------------------INFLCKFGCYQQ 586
           G    +  Y ++                                    +  LC  G  ++
Sbjct: 696 GKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKE 755

Query: 587 ARELMKVMILHGIIPDYVTYTTLV 610
           A+ ++  M+  G+  D  TY TL+
Sbjct: 756 AKAVLDEMMQKGMSVDSSTYITLM 779



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 208/468 (44%), Gaps = 5/468 (1%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           +L   L  A  V     L+  ++   I       ++ LV AC +   +  A +++++++ 
Sbjct: 320 VLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRD 379

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG   S+   N  +  L +  ++       K M   G   +V T+N +I A CK   + +
Sbjct: 380 KGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAK 439

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L   M++SG+  +    N ++   C+    E A +L R          +P+ V++  
Sbjct: 440 AFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRS---PPQRGFVPDEVSYGT 496

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++  + K  + E A  +   M K  +  ++ TY TLI G    G   EA+   +E++K+G
Sbjct: 497 VMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKG 556

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L+P++  YN  IH    EGD+E A    + M++ +  PD  T + L  GLC +G +++A 
Sbjct: 557 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAI 616

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           KL     E+    D  +YN LI  LCK  ++  A    + M  RGL PD  TY  ++   
Sbjct: 617 KLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 676

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL--CKDASLDAAKSLLQASQRIGLLD 532
            + G  E A  +   + +  K      Y  I +     K       KS  ++       D
Sbjct: 677 SEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGD 736

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
             +YN  +    + G++ EA A+  EM   G++V+   Y  L+  L K
Sbjct: 737 QESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 145/283 (51%), Gaps = 2/283 (0%)

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           + +L V   +I   + P+H+T+++L    C  G +  A    + +    +  D  +YN L
Sbjct: 192 QASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTL 251

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +   C+   L  A+ LL+ M   G+ P   TY TL+  Y + G I+ A  V E M     
Sbjct: 252 LKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGF 311

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAF 553
           +P+L  YN +  GLC+   +D A  L    + + ++  D +TYNTL++  F   + ++A 
Sbjct: 312 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDAL 371

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  EMR+ G+  + V +NI++  LC+ G  ++A   +K+M   G+ PD +TY TL+  +
Sbjct: 372 NLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAY 431

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            K  +  +   L D+MV SG+  D  T N ++  L  EK  E+
Sbjct: 432 CKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 474


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 243/473 (51%), Gaps = 4/473 (0%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
            LV+     G    A ++  K+   G    I  +   ++ L K  +  R  +L++ M+S 
Sbjct: 14  TLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSE 73

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
               N  T+ LVI +LCK+    + L ++  M+  GI PNV+ ++ +IN  C+VG L  A
Sbjct: 74  ICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREA 133

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           + LF +M       +  N +T+N +I+  C+ G  + A      M+  GI  +V T+ TL
Sbjct: 134 VNLFDEM---VSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTL 190

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           ID  ++ G  +EA ++ + M+K+G  PN V YNS ++ L     ++ A+ +   M+++ I
Sbjct: 191 IDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGI 250

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             D  +Y+ L  G C +G  ++A  L  ++  E +     +Y IL+  L ++  +  AK+
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKE 310

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L ++M + G  P + TY  L+DG CK G IE A+ V+ ++K ++ KP++ IY+ +I G+ 
Sbjct: 311 LFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMF 370

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +    ++A  +      +GL+ + +TYN +ING    GK+ EA  +F +M   G   +++
Sbjct: 371 QARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEI 430

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            +N +I    +    Q+A E +K M      P+      LV  ++ +    E+
Sbjct: 431 SFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSEL 483



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 226/448 (50%), Gaps = 8/448 (1%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  N+ T + ++  +C E K+ +AL L+ +M +SG   +++ +  +IN   +      A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 271 LKLFRKM--GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
           ++L R+M   + SG     N  T+  +I+  CK G      ++   MI  GI  NV  Y+
Sbjct: 64  VELHRRMLSEICSG-----NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYS 118

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LI+G  R G   EA+ L DEMV +G+  N + YNS IH     G  + A    S M+ +
Sbjct: 119 SLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGE 178

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I PD  T++ L   L + G V++A+K+   ++++    +  +YN L+N LC  + +  A
Sbjct: 179 GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHA 238

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L   M+ RG+  D+I+Y TLI+GYC  G  E A+ ++  M+  E  P++  Y  ++  
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           L ++  +  AK L    Q  G   ++ TY  L++G   NG I EA  +F  ++++    +
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPS 358

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              Y+ILI  + +   ++ A E+   +   G++P+ VTY  ++    K     E   L  
Sbjct: 359 IRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFV 418

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            M  SG   D  ++N II   L E   +
Sbjct: 419 QMEESGCEQDEISFNFIIRGFLQENQVQ 446



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 216/438 (49%), Gaps = 4/438 (0%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ +M   G+  ++  +  +I AL K  +   A+ L+ RML      N   + ++I+  
Sbjct: 30  ELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSL 89

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G     LK+FR+M  M    + PN + ++ +ING C++G++  A  +   M+  GI 
Sbjct: 90  CKDGLAIKGLKMFREMINMG---ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIK 146

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV TY +LI    R G  +EA R   +MV  G++P+ V + + I  L  +G V+ A  +
Sbjct: 147 ANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKI 206

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI +   P+  TY+ L  GLC +  +  A +L   ++E  +  D  SYN LIN  C 
Sbjct: 207 FELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCT 266

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S     A  L   M    L P I TY  L+    + G I  A +++ NM+   + P+L  
Sbjct: 267 SGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDT 326

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +++GLCK+  ++ A  + ++ + I    +I  Y+ LI G F   +   A  +F E+ 
Sbjct: 327 YTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIP 386

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
            VG+  N V YNI+IN LCK G   +A  L   M   G   D +++  ++  F +    +
Sbjct: 387 TVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQ 446

Query: 621 EVIELHDDMVLSGVSPDN 638
           + +E    M     SP++
Sbjct: 447 KAMEFLKRMREKNFSPND 464



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 213/412 (51%), Gaps = 8/412 (1%)

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--GVMSGDSVLPNSVTHNCIINGFC 300
           +KSG  PN+V  + ++   C  G +  AL+LF KM      GD +L     +  +IN   
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILL-----YGYLINALR 55

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K  +   A E+   M+      N  TY  +ID   + G + + L++  EM+  G+ PN +
Sbjct: 56  KTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVI 115

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           VY+S I+ L   G +  A+ +  +M+ + I  +  TY+ L    CR G  K+A +  +Q+
Sbjct: 116 VYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQM 175

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           + E ++ D  ++  LI++L K   +  A ++   MI +G  P+I+TY +L++G C    +
Sbjct: 176 VGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQM 235

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTL 539
           + AV+++E M +   K +++ YN++ING C     + A +L +  Q   L  +IT Y  L
Sbjct: 236 DHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTIL 295

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           +   + NG+I  A  +F+ M+  G + +   Y +L++ LCK GC ++A ++ + +     
Sbjct: 296 LKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKY 355

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            P    Y+ L+    +    E  +E+ D++   G+ P+  TYN +I+ L  E
Sbjct: 356 KPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKE 407



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 214/422 (50%), Gaps = 16/422 (3%)

Query: 110 FDDALLLMGNLMSA-----NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           F   +LL G L++A      +   +E    +L   EIC      +  ++ +  + G    
Sbjct: 40  FQGDILLYGYLINALRKTRQARRAVELHRRMLS--EICSGNFFTYGLVIDSLCKDGLAIK 97

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
              + +++   G   ++  +++ ++ L ++ ++     L+ EMVS G   NV T+N +I+
Sbjct: 98  GLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIH 157

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A C+    +EA   + +M+  GI P+VV F  +I+   + G ++ A K+F  M +  G++
Sbjct: 158 ASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM-IKQGEA 216

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             PN VT+N ++NG C   +++ A  +   M++ GI  +V +Y TLI+GY   G +EEA+
Sbjct: 217 --PNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAM 274

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC---PDHFTYSILT 401
            L  +M    L P+   Y   +  L+  G +  A  + ++M    IC   P   TY++L 
Sbjct: 275 TLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM---QICGQSPSLDTYTVLL 331

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GLC+NGC+++A  +   +           Y+ILI  + ++    +A ++   +   GL+
Sbjct: 332 DGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLV 391

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P+I+TY  +I+G CK G +  A +++  M++   + + + +N II G  ++  +  A   
Sbjct: 392 PNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEF 451

Query: 522 LQ 523
           L+
Sbjct: 452 LK 453



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 36/376 (9%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           +K+G   N+ T +TL+ G    G   +AL L D+M + G   + ++Y   I+ L      
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTK--------------------------------- 402
             A+ +   M+ +    + FTY ++                                   
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 403 --GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GLCR G +++A  L ++++ + +  +  +YN LI+  C+      A +  S M+  G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +PD++T+ TLID   K G ++ A +++E M K  + PN+V YNS++NGLC    +D A  
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L +     G+ +D I+YNTLINGY  +GK  EA  +F +M+   +  +   Y IL+  L 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           + G  + A+EL   M + G  P   TYT L+    KN   EE I++   +      P  +
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 640 TYNAIISPLLGEKSAE 655
            Y+ +I  +   +  E
Sbjct: 361 IYSILIGGMFQARRWE 376



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 156/321 (48%), Gaps = 3/321 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KA    +++L+ A  + G  + A     ++  +G    +  +   + HL K  ++   +K
Sbjct: 146 KANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYK 205

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +++ M+  G   N+ T+N ++  LC   +++ A+ L+  M++ GI  +V+ +N +IN  C
Sbjct: 206 IFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYC 265

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G  E A+ LFRKM     + + P+  T+  ++    + GR+  A+E+   M   G   
Sbjct: 266 TSGKTEEAMTLFRKMQY---EELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSP 322

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ TY  L+DG  + G  EEA+ +   +      P+  +Y+  I  +F     E A+ + 
Sbjct: 323 SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIF 382

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            ++    + P+  TY+I+  GLC+ G + +A +L  Q+ E     D  S+N +I    + 
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442

Query: 443 NNLAAAKQLLSSMIVRGLIPD 463
           N +  A + L  M  +   P+
Sbjct: 443 NQVQKAMEFLKRMREKNFSPN 463



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 3/205 (1%)

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
            YE    +   +  L++A  Q G    A ++   +++ G S S+  +   L  L K   I
Sbjct: 281 QYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCI 340

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
                +++ + S  Y  ++  ++++I  + +  + E A+ ++  +   G+ PN+V +N++
Sbjct: 341 EEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIM 400

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           IN  C+ G L  A +LF +   M       + ++ N II GF +  +V+ A E    M +
Sbjct: 401 INGLCKEGKLLEAERLFVQ---MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMRE 457

Query: 318 AGIDCNVRTYATLIDGYARGGSSEE 342
                N      L++ YA    S E
Sbjct: 458 KNFSPNDSVTLMLVNLYAADAQSSE 482


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 151/496 (30%), Positives = 248/496 (50%), Gaps = 21/496 (4%)

Query: 174 VKGHSV--SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           ++ H +  ++  WN  +        + + W LY EM+SCG + NV T N++++A CK   
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L  AL L   +    I  + V +N  I   CQ G    A + F  + +M       +S T
Sbjct: 62  LSLALDLIRNV---DIDVDTVTYNTAIWGFCQQG---LANQGFGFLSIMVKKDTFFDSFT 115

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIK--------AGIDCNVRTYATLIDGYARGGSSEEA 343
            N ++ GFC++G V++ E +   +I           ++ N+ TY TLI  Y +     EA
Sbjct: 116 CNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEA 175

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           L L +EM+  G +P+ V Y+S I+ L   G +  A  +L +M    + P+H  Y+IL   
Sbjct: 176 LSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDS 235

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           L + G   ++F   +Q++   +  D      LI+ L K+     A+ +  ++     IP+
Sbjct: 236 LFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPN 295

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
            ITY  +IDGYCK G+++GA  +  +M+K +  PN+V Y+SIING  K   LD A  +++
Sbjct: 296 NITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMK 355

Query: 524 A--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
               Q I + +A  Y TLI+G+   GK   A  +++EM+  G+  N    +  IN L + 
Sbjct: 356 KMLDQNI-MPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRG 414

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
              ++A  L K M+  G++ D V YT+L+  F K         + + M  +G+  D   Y
Sbjct: 415 RKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAY 474

Query: 642 NAIISPL--LGEKSAE 655
           N +I+ L  LG+  AE
Sbjct: 475 NVLINGLLRLGKYDAE 490



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 235/472 (49%), Gaps = 40/472 (8%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N+ T+  +I A CK+  L EALSLY  M+  G  P+VV ++ IIN  C+ G L  A  L 
Sbjct: 155 NLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALL 214

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R+M  M    V PN V +  +++   K G    +   +  MI  G+  ++    TLIDG 
Sbjct: 215 REMDKMG---VNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGL 271

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G S+EA  +   + K   +PNN+ Y + I      GD++GA  +L DM  K + P+ 
Sbjct: 272 FKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNV 331

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI------------------ 436
            TYS +  G  + G +  A ++  ++L+++++ +AY Y  LI                  
Sbjct: 332 VTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNE 391

Query: 437 -----------------NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
                            N L +   +  A+ L   M+ +GL+ D + Y +L+DG+ K G 
Sbjct: 392 MKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGR 451

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
              A  + E M +   K ++V YN +INGL +    DA +S+    + +GL  D  TYNT
Sbjct: 452 ESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDA-ESVYSGIRELGLAPDRATYNT 510

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +IN Y   GK+  A  +++EM+   +  N +  NIL+  L K G  ++A +++  M+L G
Sbjct: 511 MINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWG 570

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           I P+   +  L+   SK    + ++++H  +V  G+  + + YN++I+ L G
Sbjct: 571 ICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCG 622



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 218/449 (48%), Gaps = 8/449 (1%)

Query: 198 GRFWKLY---KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           G  W+ +    +M+ CG   ++     +I  L K  K +EA +++  + K    PN + +
Sbjct: 240 GSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITY 299

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
             +I+  C++GD++ A  L R M       V+PN VT++ IING+ K G ++ A  I   
Sbjct: 300 TAMIDGYCKLGDMDGAESLLRDM---EKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+   I  N   YATLIDG+ + G  + A+ L +EM   GL  N+ + ++ I+ L     
Sbjct: 357 MLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRK 416

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E A  +   M+ K +  D   Y+ L  G  + G    AF +  ++ E  +  D  +YN+
Sbjct: 417 MEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNV 476

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN L +     A + + S +   GL PD  TY T+I+ YCK G +E A++++  MK   
Sbjct: 477 LINGLLRLGKYDA-ESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHS 535

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAF 553
             PN +  N ++ GL K    + A  +L      G+   +T +  L+N      +     
Sbjct: 536 VMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTIL 595

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            M   +  +G+  N+  YN LI  LC  G  ++A  ++  M   GI  D VTY  L+   
Sbjct: 596 QMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGH 655

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
            K+   E+ +  +  M+  GVSP  +TYN
Sbjct: 656 FKSSHIEKALATYTQMLNEGVSPGIRTYN 684



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 216/460 (46%), Gaps = 17/460 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           + DA +    +    E A  + + +  KG  +    + + +    K       + + ++M
Sbjct: 403 IVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKM 462

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +V  +N++I  L +  K + A S+Y  + + G+ P+   +N +IN  C+ G L
Sbjct: 463 AETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKL 521

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A+KL+ +M    G SV+PNS+T N ++ G  K G  E A ++   M+  GI  NV  +
Sbjct: 522 ENAIKLWNEM---KGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIH 578

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++  ++   ++  L++   +V  GL  N  VYNS I  L   G  + A  VL++M  
Sbjct: 579 RALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTK 638

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I  D  TY+ L  G  ++  +++A   + Q+L E +     +YN+L+  L  +  ++ 
Sbjct: 639 EGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSK 698

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A ++LS M   GL PD   Y TLI G+ K GN + A++ Y  M      P    YN +I 
Sbjct: 699 AYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIE 758

Query: 508 GLCKDASLDAAKSLLQASQ-RIGLLDAITYNTLINGY----------FINGKI--AEAFA 554
              K   +D A+ LL   Q R    ++ TY+ LI G+           I+ K    EA  
Sbjct: 759 DFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEART 818

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +F+EM   G    +     + +   + G    A+ ++K M
Sbjct: 819 LFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDM 858



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 199/419 (47%), Gaps = 15/419 (3%)

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I P +  +N +I +    G +     L+ +M +  G  VLPN  THN +++ +CK+G + 
Sbjct: 7   IVPTLPLWNRLIYQFNATGLVSQVWDLYSEM-LSCG--VLPNVFTHNILVHAWCKMGHLS 63

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A ++   +    ID +  TY T I G+ + G + +       MVK+    ++   N  +
Sbjct: 64  LALDL---IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILV 120

Query: 367 HWLFAEGDVEGALFVLSDMIDK--------HICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
                 G V+   +V+ ++ID         ++ P+  TY+ L    C+   + +A  L+ 
Sbjct: 121 KGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYE 180

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           +++ +  + D  +Y+ +IN LCK   L  AK LL  M   G+ P+ + Y  L+D   K G
Sbjct: 181 EMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG 240

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
           +   +      M       +LV+  ++I+GL K    D A+++     ++  + + ITY 
Sbjct: 241 SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYT 300

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            +I+GY   G +  A ++  +M    +  N V Y+ +IN   K G    A  +MK M+  
Sbjct: 301 AMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQ 360

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            I+P+   Y TL+    K    +  ++L+++M L+G+  ++   +A I+ L   +  E+
Sbjct: 361 NIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEE 419


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 220/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   +   +A  L+  ++S     S     E +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L H +KL      W  YK
Sbjct: 66  VYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M G  + P+  T++ +ING CK  ++  A E+   MI  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + GS + A+    EM+++G  P+ + YN+ I+ L  EGD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AFK   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK G+++   ++ + M++    P +V
Sbjct: 363 VGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVV 417



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 153/289 (52%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V  ++    + P   +++ L  G  R G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   MI  GL+P+ +T+ 
Sbjct: 186 DLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G+I+ A++ Y+ M +    P+L+ YN++I GLCK+  L  A+ L+      
Sbjct: 246 TLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F K    +   +L  +M   G  P
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +   + K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHG 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  +  A  +  +MI   + P+  T++ L  G C+ G +  
Sbjct: 200 SGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A + + ++L +    D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +   G +     +  EM+  G
Sbjct: 380 DNGTYTMIINEFCKKGDVKMGSKLLKEMQRDG 411



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 177/360 (49%), Gaps = 10/360 (2%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +V  F+ +I    + G L  AL+ FR   +           T   ++  F KL   +   
Sbjct: 65  DVYVFSGLITAYLESGFLHDALECFR---LTREHKFWVPFDTCRKVLEHFMKLKYFKSVW 121

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                +++ G   ++  +  L+  + + G    A  + DE+ K GL P+ V +N+ ++  
Sbjct: 122 GFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGY 181

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              GD++    + S M    I PD +TYS+L  GLC+   +  A +L ++++   +V + 
Sbjct: 182 IRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNG 241

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++  LI+  CK+ ++  A +    M+ +G  PD+ITY TLI G CK G+++ A  + + 
Sbjct: 242 VTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDE 301

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFI 545
           M     KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G   
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIR---LDDVAYTALISGLCR 358

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G+   A  M  EM +VG+  +   Y ++IN  CK G  +   +L+K M   G +P  VT
Sbjct: 359 EGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 127/242 (52%), Gaps = 1/242 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +   +   GL P ++++ TL
Sbjct: 118 KSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ ++ A  L       GL
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+   G I  A   + EM   G + + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   +    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GE 651
            E
Sbjct: 358 RE 359



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + +++ +  +     S+N L+N   +  +L    +L S+
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   +  A ++++ M      PN V + ++I+G CK  S
Sbjct: 197 MHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGS 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A    +   R G   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 IDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A +  K MI   I  D V YT L++   +        ++  +M+  G
Sbjct: 317 LIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + PDN TY  II+
Sbjct: 377 LKPDNGTYTMIIN 389



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 57/286 (19%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVR------------------GLIPDIITYGTLI 471
           +SY  +I++LC    L  AK L+  ++ R                      D+  +  LI
Sbjct: 14  HSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLI 73

Query: 472 DGYCKGGNIEGAVQ-------------------VYENMKKVEK----------------K 496
             Y + G +  A++                   V E+  K++                  
Sbjct: 74  TAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECGYP 133

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAM 555
            +L  +N +++  CK+  +  A+S+     + GL  ++ ++NTL+NGY   G + E F +
Sbjct: 134 ASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            S M   GI  +   Y++LIN LCK      A EL   MI +G++P+ VT+TTL+    K
Sbjct: 194 KSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCK 253

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
             S +  +E + +M+  G SPD  TYN +I  L  E   K A+D +
Sbjct: 254 TGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLI 299


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 233/467 (49%), Gaps = 5/467 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           + N F S  +  N +      +  M+      +   FN ++ ++ K  +     SL  +M
Sbjct: 36  SHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM 95

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              GI P+V   N++IN  C +  L FA  +  K+  +      P++ T   +I G C  
Sbjct: 96  DSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQ---PDTATFTTLIRGLCVE 152

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G++  A  +   MI  G   NV TY TLI+G  + G++  A+RL   M +    P+ VVY
Sbjct: 153 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 212

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            S I  L  +  V  A  + S M+ + I PD FTY+ L   LC     K    L NQ++ 
Sbjct: 213 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 272

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++ D   ++ +++ LCK   +  A  ++  MI+RG+ P+++TY  L+DG+C    ++ 
Sbjct: 273 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 332

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLIN 541
           AV+V++ M      PN++ YN++ING CK   +D A  L +   Q+  + + +TYNTL++
Sbjct: 333 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 392

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
              + G++ +A A+F EM   G   +   Y IL+++LCK     +A  L+K +    + P
Sbjct: 393 XCHV-GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 451

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D   YT ++    +    E   ++  ++   G+ P+ +TY  +I+ L
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 254/549 (46%), Gaps = 22/549 (4%)

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           +N+   DDAL     ++  +          LL S    K  P VF               
Sbjct: 45  LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFS-------------- 90

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
              +  ++   G    ++  N  ++    LN +G  + +  +++  G+  +  TF  +I 
Sbjct: 91  ---LSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIR 147

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC E K+ +AL L+ +M+  G  PNVV +  +IN  C+VG+   A++L R    M   +
Sbjct: 148 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS---MEQGN 204

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P+ V +  II+  CK  +V  A  +   M+  GI  ++ TY +LI         +   
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 264

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L ++M+   +MP+ V++++ +  L  EG +  A  V+  MI + + P+  TY+ L  G 
Sbjct: 265 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C    + +A K+ + ++      +  SYN LIN  CK   +  A  L   M  + LIP+ 
Sbjct: 325 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TL+   C  G ++ A+ ++  M    + P+L  Y  +++ LCK + LD A +LL+ 
Sbjct: 385 VTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +   +  D   Y  +I+G    G++  A  +FS + + G+  N   Y I+IN LC+ G 
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 503

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A +L   M  +G  PD  TY T+     +N      I+L  +M+  G S D  T   
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTL 563

Query: 644 IISPLLGEK 652
           ++  L  +K
Sbjct: 564 LVEMLCDDK 572



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 216/446 (48%), Gaps = 5/446 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  L+R     G    A  +  K+  +G   ++  +   ++ L K+       +L + 
Sbjct: 140 ATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS 199

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V  +  +I +LCK+ ++ EA +L+ +M+  GI P++  +  +I+  C + +
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L  +M       ++P+ V  + +++  CK G++  A ++   MI  G++ NV T
Sbjct: 260 WKHVTTLLNQM---INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVT 316

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      +EA+++ D MV  G  PN + YN+ I+       ++ A ++  +M 
Sbjct: 317 YNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMC 376

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            K + P+  TY+ L    C  G ++ A  L ++++    + D  +Y IL++YLCK ++L 
Sbjct: 377 QKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD 435

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL ++    + PDI  Y  +IDG C+ G +E A  ++ N+     +PN+  Y  +I
Sbjct: 436 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 495

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           NGLC+   LD A  L       G   D  TYNT+  G   N +   A  +  EM   G +
Sbjct: 496 NGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFS 555

Query: 566 VNKVGYNILINFLCKFGCYQQARELM 591
            +     +L+  LC     Q  ++++
Sbjct: 556 ADVSTTTLLVEMLCDDKLDQSVKQIL 581



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 4/205 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+  C  +G  + A  +  ++   G    +  +   L +L K + +     L K +
Sbjct: 386 TYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 444

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  ++  + +VI  +C+  +LE A  ++  +   G+ PNV  + ++IN  C+ G L
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLL 504

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A KLF +M    G+   P+  T+N I  G  +      A ++   M+  G   +V T 
Sbjct: 505 DEANKLFMEM---DGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTT 561

Query: 328 ATLIDGYARGGSSEEALRLCDEMVK 352
             L++        +   ++  E V+
Sbjct: 562 TLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 1/178 (0%)

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A+  +  M  +   P+ V +N ++  + K        SL       G+  D  T N 
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LIN +    ++  AF++ +++  +G   +   +  LI  LC  G    A  L   MI  G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             P+ VTY TL+    K  +    I L   M      PD   Y +II  L  ++   +
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 262/586 (44%), Gaps = 73/586 (12%)

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           LL+S +   A       ++++C+       A + +     +G  + +  +   L  L KL
Sbjct: 147 LLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKL 206

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           N        Y +++  G   N+  +N VI ALCK+  + +A S+  ++ KSG+ P+   +
Sbjct: 207 NMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTY 266

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC-------------- 300
             +I   C+  DL+ A ++F +M     +   PN+ T++ +ING C              
Sbjct: 267 TSMILGYCRNRDLDSAFEIFNRM---DEEGCEPNAATYSTLINGLCNSGRVNEALDFISE 323

Query: 301 ---------------------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG------ 333
                                 +GR+E A +I   M K G   NV TY +LI G      
Sbjct: 324 MTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM 383

Query: 334 -------YARGG-------------------SSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
                   +R G                     + AL + + M K G +PN   YN  I 
Sbjct: 384 AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIR 443

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                GD E A+ +L++M+     P   TY+I+ KG C +G    A ++   +       
Sbjct: 444 GYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQP 503

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D +SY  LI+  CK + +  A  + + M+ RGL P+ +TY  LI GYCK   ++ A ++ 
Sbjct: 504 DEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARML 563

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFI 545
           E MK+   +PN+  YN +I+GL K  +   A+ L +    ++I   D +TY+T+ING   
Sbjct: 564 ERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISP-DVVTYSTVINGLCN 622

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           NG I  A  MF++M   G   N   Y+ LI  L + G  ++A E+   +   G+IPD VT
Sbjct: 623 NGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVT 682

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           Y  ++     +   +   +   +M+ +G  P  QTY+ +I  L  E
Sbjct: 683 YVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 124/553 (22%), Positives = 225/553 (40%), Gaps = 93/553 (16%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS-HLVKLNEIGRFWKLYKE 206
            F A + A   +G  E A+ +   +K KG   +++ + + +S   V    IG F ++ ++
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRD 394

Query: 207 -------------------------------MVSCGYVENVNTFNLVIYALCKECKLEEA 235
                                          M   G + N +++N +I   C     E+A
Sbjct: 395 GVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKA 454

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           +S+   MLK    P +V +N+II   C  GD + A+++     +M  +   P+  ++  +
Sbjct: 455 MSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLE---LMKANGCQPDEWSYTEL 511

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+GFCK+ ++E A  +   M+  G+  N  TY  LI GY +    + A R+ + M + G 
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN   YN  IH L  + +  GA  +   M+++ I PD  TYS +  GLC NG +  A +
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI-------------- 461
           + N++++   + + ++Y+ LI  L +   +  A+++ S +  +GLI              
Sbjct: 632 MFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCV 691

Query: 462 ---------------------PDIITYGTLIDG------YCKGGNIEGAVQVYENMKKVE 494
                                P + TY  LI G      Y K   +  A        ++ 
Sbjct: 692 MSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQII 751

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-----------------DAITYN 537
            K  + + +S +  L  + S     +LL    R G                   +  TY 
Sbjct: 752 NKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYK 811

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
             +       K+  A  +F  M +    ++  GY  LI  LC+    ++AR + + M+  
Sbjct: 812 HFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSR 871

Query: 598 GIIPDYVTYTTLV 610
            +  D + +T L+
Sbjct: 872 ALNADEIVWTILI 884



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 186/426 (43%), Gaps = 62/426 (14%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           + TP +  ++ +++     G T+ A  V++ +K  G      ++   +S   K++++   
Sbjct: 465 RPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELA 524

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             ++ EM+  G   N  T+  +I   CK+ KL+ A  +  RM +SG  PNV  +N++I+ 
Sbjct: 525 SGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHG 584

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             +  +   A +L +   VM  + + P+ VT++ +ING C  G +  A E+   M+K G 
Sbjct: 585 LTKQNNFSGAEELCK---VMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N+ TY++LI    + G  EEA  +  E+ K+GL+P+ V Y   I      G V+ A  
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN---------QVLEEHMVGDAYS 431
            L +MI+    P   TY +L KGL       +   L N         Q++ + ++    S
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSS 761

Query: 432 -------------YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
                        Y+ L++ L +S     A  L  SM+ +   P+  TY   +    +  
Sbjct: 762 KLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRAL 821

Query: 479 NIEGAVQVYENM-----------------------KKVEKK------------PNLVIYN 503
            ++ A+ V+++M                       ++ E +             + +++ 
Sbjct: 822 KVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWT 881

Query: 504 SIINGL 509
            +INGL
Sbjct: 882 ILINGL 887


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 198/362 (54%), Gaps = 6/362 (1%)

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           +V +N +I   C+ G LE A   F  M  M+   + P+  T+N IING CK GR   A+ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEA---FEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKG 57

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           I   M+  G+  +  TY TL+    R  +  EA  +  EM+++G++P+ V ++S +    
Sbjct: 58  ILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFS 117

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
               ++ AL    DM    + PD+  Y++L  G CRNG + +A K+ +++LE+  V D  
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN ++N LCK   L  A +L   M+ RG +PD  T+ TLI G+C+ GN+  A+ ++  M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGK 548
            +   KP++V YN++I+G CK   ++ A  L     S++I   + ITY  LIN Y   G 
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKI-FPNHITYGILINAYCSVGH 296

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           ++EAF ++  M   GI    V  N +I   C+ G   +A E +  MI  G+ PD+++Y T
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356

Query: 609 LV 610
           L+
Sbjct: 357 LI 358



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 173/335 (51%), Gaps = 3/335 (0%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY TLI  Y R G  EEA  + + M  +GL P+   YN+ I+ L  +G    A  +L +M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           ++  + PD  TY+ L    CR     +A ++  ++L + +V D  S++ L+    ++ +L
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A      M   GL+PD + Y  L+ GYC+ GN+  A+++ + M +     +++ YN+I
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 506 INGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           +NGLCK+  L DA K   +  +R  L D  T+ TLI+G+  +G + +A ++F  M    I
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             + V YN LI+  CK G  ++A EL   MI   I P+++TY  L+  +       E   
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQ 657
           L D M+  G+ P   T N +I      G+ S  D+
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 337



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 184/358 (51%), Gaps = 1/358 (0%)

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+N +I  +C+ G +E A EI  +M   G+  ++ TY  +I+G  + G    A  +  E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  GL P+   YN+ +       +   A  +  +M+ + + PD  ++S L     RN  
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           + QA      + +  +V D   Y +L++  C++ N+  A ++   M+ +G + D+I Y T
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRI 528
           +++G CK   +  A ++++ M +    P+   + ++I+G C+D ++  A SL    +QR 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D + YNTLI+G+   G++ +A  ++  M +  I  N + Y ILIN  C  G   +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            L  VMI  GI P  VT  T++  + ++    +  E    M+  GV+PD+ +YN +I+
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 189/360 (52%), Gaps = 3/360 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+ A  + G  E A++++  +  KG   S+  +N  ++ L K     R   +  EM
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           ++ G   +  T+N ++   C+     EA  ++  ML+ G+ P++V F+ ++    +   L
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL  FR M       ++P++V +  +++G+C+ G +  A +IR  M++ G   +V  Y
Sbjct: 123 DQALVYFRDMKKFG---LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+++G  +     +A +L DEMV+RG +P+   + + IH    +G++  AL +   M  
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           ++I PD   Y+ L  G C+ G +++A +L + ++   +  +  +Y ILIN  C   +++ 
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 299

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L   MI +G+ P ++T  T+I GYC+ G+   A +    M      P+ + YN++IN
Sbjct: 300 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 83/148 (56%), Gaps = 1/148 (0%)

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFS 557
           +V YN++I   C++  L+ A  ++ +    GL  ++ TYN +ING    G+ A A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM N+G++ +   YN L+   C+   + +A+E+   M+  G++PD V++++L+  FS+N 
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAII 645
             ++ +    DM   G+ PDN  Y  ++
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLM 148


>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
 gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 235/465 (50%), Gaps = 5/465 (1%)

Query: 24  KQFANPSTEDIVF-RAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYT 82
           +    P   D+ F   +  +L    W  L+ ++  LT   V  ++ + +K   L+LEF+ 
Sbjct: 44  RSIPEPRGPDLDFVNVVHSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFN 103

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS-PLEFLEGLLDSYEI 141
           WV   N  SH+LE+ C I+H+L   R+F  A  ++ +++ + S+  P +  E LL SY +
Sbjct: 104 WVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRL 163

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C ++P VFD L +    +     A D   ++K  G   ++ + N +LS L+  +      
Sbjct: 164 CDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIAL 223

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             Y+EM       N  T NLVI A CK  +L++A  ++  M   G  PNV  +N +I   
Sbjct: 224 AFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGY 283

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G L  A+KL     VM  + V P+ VT N ++NGFCK+G+++ A ++   M    + 
Sbjct: 284 CNKGLLSSAMKL---RSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLS 340

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
               TY  LI+GY++ G+ E   RL +EM +  +  + + YN+ I  L  EG  + A ++
Sbjct: 341 PTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYL 400

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           + ++ +K + P+  T+S L  G C     ++AF+++  +++        ++ +L++  C+
Sbjct: 401 VRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCE 460

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
           + +   A QLL  M+ R   PD+     L  G  + G ++ A+ +
Sbjct: 461 NEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMML 505



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 150/344 (43%), Gaps = 4/344 (1%)

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
           + F+L+        K   A   + RM   G  P V   N  ++        + AL  +R+
Sbjct: 169 HVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYRE 228

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           M       + PNS T N +I   CKLGR++ A  +   M   G   NV +Y TLI GY  
Sbjct: 229 M---RRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCN 285

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G    A++L   M K G+ P+ V +N+ ++     G ++ A  +  +M    + P   T
Sbjct: 286 KGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVT 345

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+IL  G  + G  +   +L  ++    +  D  +YN LI  LCK      A  L+  + 
Sbjct: 346 YNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELD 405

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            +GL+P+  T+  LI G C     E A Q+Y++M K    P    +  +++  C++   D
Sbjct: 406 EKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYD 465

Query: 517 AAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
            A  LL+    R    D      L  G    GK+  A  + SE+
Sbjct: 466 GAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSEL 509



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 169/369 (45%), Gaps = 25/369 (6%)

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDGYARGGSSEEALRL--- 346
           TH  I++   K  + + AE I  ++I++  ID   + + +L+  Y    SS     L   
Sbjct: 117 THCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFK 176

Query: 347 ---------------CDEMVKRGLMPNNVVYNSTIHWL--FAEGDVEGALFVLSDMIDKH 389
                          C  M   G +P     N+ +  L  F+ GD+  AL    +M    
Sbjct: 177 TFAHLKKFRNASDTFC-RMKDYGFLPTVESCNAYLSSLLNFSRGDI--ALAFYREMRRSR 233

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I P+ +T +++    C+ G + +A  +  ++       +  SYN LI   C    L++A 
Sbjct: 234 IYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAM 293

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +L S M   G+ PD++T+ TL++G+CK G ++ A +++  MK +   P  V YN +ING 
Sbjct: 294 KLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGY 353

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            K  + +    L +   R  +  D +TYN LI G    GK  +A  +  E+   G+  N 
Sbjct: 354 SKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNA 413

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             ++ LI   C     ++A ++ K MI     P   T+  L++ F +N   +  ++L ++
Sbjct: 414 STFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEE 473

Query: 629 MVLSGVSPD 637
           M+    +PD
Sbjct: 474 MLNRHKAPD 482



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 1/235 (0%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A   + ++    +  ++Y+ N++I   CK   L  A  +   M   G  P++ +Y TLI 
Sbjct: 222 ALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIA 281

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           GYC  G +  A+++   M+K    P++V +N+++NG CK   L  A  L    + + L  
Sbjct: 282 GYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSP 341

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
             +TYN LINGY   G       +F EM    +  + + YN LI  LCK G  ++A  L+
Sbjct: 342 TTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLV 401

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +   G++P+  T++ L+         E   +++  M+ S  +P +QT+  ++S
Sbjct: 402 RELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLS 456



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 1/197 (0%)

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           + P+  T   +I   CK G ++ A  V+E M  +   PN+  YN++I G C    L +A 
Sbjct: 234 IYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAM 293

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L    ++ G+  D +T+NTL+NG+   GK+ EA  +F EM+ + ++   V YNILIN  
Sbjct: 294 KLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGY 353

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G  +    L + M    +  D +TY  L+    K    ++   L  ++   G+ P+ 
Sbjct: 354 SKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNA 413

Query: 639 QTYNAIISPLLGEKSAE 655
            T++A+I     +K +E
Sbjct: 414 STFSALIYGQCVQKQSE 430


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 226/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           + ++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  IFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD  TY+ L  G C++G +  AF+   ++++E+   D   Y  
Sbjct: 298 LKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 161/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V+Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 159/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G   +G +  AF     M      ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + +++T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 244 VPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K+   +   E    M+      D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 REGQSVD 370


>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Glycine max]
          Length = 626

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 264/558 (47%), Gaps = 20/558 (3%)

Query: 50  ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
           IL  M P   + ++ R  S+        L F+ WV  +   + +L + C IVH+L   R 
Sbjct: 80  ILPHMGPHEISRILLRCQSDHSS----VLTFFNWVKNDLNITPTLHNYCVIVHILAWSRV 135

Query: 110 FDDALLLMGNLMSANSVSPL------EFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           F  A+ L+  L+    V  +         E L++  E C   PA+FD L++A  + G  E
Sbjct: 136 FSHAMNLLSELIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVE 195

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
                 ++        ++ A N  LS L + N IG+ W +Y+EM   G   N  TFN++ 
Sbjct: 196 KGLATFRRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMT 255

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
           + LCK+   ++      +M + G  P++V +N ++N  C+   LE A  L++   +M   
Sbjct: 256 HVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYK---IMYIR 312

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V+PN +TH  ++NG C+ G+V+ A ++ + M+  GID +V +Y TL+ GY R G  +  
Sbjct: 313 GVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMC 372

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             L  EM+  G+ P++V     +     +G +  AL  + ++    I      Y  L   
Sbjct: 373 RSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVA 432

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LC  G    A     ++ ++  +    +YN L+  LCK NN+  A  L S M+ R +I +
Sbjct: 433 LCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILN 492

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++ Y  +I   C+      A  + E M      P++ I  ++ING C++  +D A SLL+
Sbjct: 493 LVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLK 552

Query: 524 -ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             +    + D  +YN ++  +   G +AE   +  ++  VG   N++    +I+ L    
Sbjct: 553 FFANEFQVYDTESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGL---- 608

Query: 583 CYQQARELMKVMILHGII 600
             Q+A E    M+ H ++
Sbjct: 609 --QKAMEQDDEMLGHDML 624



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 188/397 (47%), Gaps = 4/397 (1%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N   F+M+I    + G +E  L  FR+         +PN +  NC+++G  +   +    
Sbjct: 177 NPAIFDMLIKAYVKAGMVEKGLATFRRN---IEACFIPNVIACNCLLSGLSRFNYIGQCW 233

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +   M + GI  N  T+  +     + G +++  R  D+M + G  P+ V YN+ ++  
Sbjct: 234 AVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSY 293

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +  +E A ++   M  + + P+  T+++L  GLC  G VK+A +L +Q++   +  D 
Sbjct: 294 CKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDV 353

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            SYN L++  C+   +   + LL  MI  G+ PD +T   +++G+ + G +  A+     
Sbjct: 354 VSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVE 413

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGK 548
           +K+   K    +Y+ +I  LC +    AA+S L    + G +  I TYN L+        
Sbjct: 414 LKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKFNN 473

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA  + SEM    + +N V Y  +I+ LC+     +A  L++ M+  GI+PD      
Sbjct: 474 VEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEISRA 533

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           L+  + +    ++ + L           D ++YNA++
Sbjct: 534 LINGYCEENKVDKAVSLLKFFANEFQVYDTESYNAVV 570



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 162/337 (48%), Gaps = 3/337 (0%)

Query: 315 MIKAGIDCN--VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
           +++   DCN     +  LI  Y + G  E+ L      ++   +PN +  N  +  L   
Sbjct: 167 LVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATFRRNIEACFIPNVIACNCLLSGLSRF 226

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             +     V  +M    I  + +T++I+T  LC++G   +  +  +++ EE    D  +Y
Sbjct: 227 NYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTY 286

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N L+N  CK   L  A  L   M +RG++P++IT+  L++G C+ G ++ A Q++  M  
Sbjct: 287 NTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVH 346

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
               P++V YN++++G C++  +   +SLL      G+  D++T   ++ G+  +GK+  
Sbjct: 347 RGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLS 406

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A     E++   I + +  Y+ LI  LC  G    AR  +  +   G +P   TY  LV 
Sbjct: 407 ALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVE 466

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              K  + EE + L  +MV   +  +   Y A+IS L
Sbjct: 467 SLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCL 503



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 165/377 (43%), Gaps = 11/377 (2%)

Query: 288 NSVTHNCIINGFCKLGRVE-----FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           N    + +I  + K G VE     F   I    I   I CN      L+ G +R     +
Sbjct: 177 NPAIFDMLIKAYVKAGMVEKGLATFRRNIEACFIPNVIACN-----CLLSGLSRFNYIGQ 231

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
              + +EM + G+  N   +N   H L  +GD +     L  M ++   PD  TY+ L  
Sbjct: 232 CWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVN 291

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
             C+   ++ AF L+  +    ++ +  ++ +L+N LC+   +  A QL   M+ RG+ P
Sbjct: 292 SYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDP 351

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D+++Y TL+ GYC+ G ++    +   M      P+ V    I+ G  +D  L +A + +
Sbjct: 352 DVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTV 411

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              +R  + +    Y+ LI    I G+   A +    +   G       YN L+  LCKF
Sbjct: 412 VELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKINTYNKLVESLCKF 471

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
              ++A  L   M+   +I + V Y  +++   +     E   L ++MV SG+ PD +  
Sbjct: 472 NNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEMVSSGILPDVEIS 531

Query: 642 NAIISPLLGEKSAEDQV 658
            A+I+    E   +  V
Sbjct: 532 RALINGYCEENKVDKAV 548



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 17/230 (7%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           ++Y ++++ L  S   + A  LLS +I   L+         ++G C   N +G   +YEN
Sbjct: 121 HNYCVIVHILAWSRVFSHAMNLLSELI--QLVE--------VEGVCVPPN-DG---IYEN 166

Query: 490 MKKVEKKPNL--VIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFIN 546
           + +  +  N    I++ +I    K   ++   +  + + +   + + I  N L++G    
Sbjct: 167 LVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATFRRNIEACFIPNVIACNCLLSGLSRF 226

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
             I + +A++ EM  +GI  N   +NI+ + LCK G   +    +  M   G  PD VTY
Sbjct: 227 NYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTY 286

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            TLV  + K    E+   L+  M + GV P+  T+  +++ L  E   ++
Sbjct: 287 NTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKE 336


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 220/449 (48%), Gaps = 4/449 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   N  T N++I   C+  +++   S+  + +K G+ P +V F  +IN   +VG    A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           ++LF  M V  G    P+  T+  IING CK+G    A  +   M +AG   NV TY+TL
Sbjct: 65  VELFDDM-VARG--CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTL 121

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I    +     EAL +   M  + + P    Y S I  L      + A  +L++M   +I
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  T+++L    C+ G V  A  +   + E  +  D  +YN L+        +  A++
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   MI +G  PD+ +Y  LI+GYCK   I+ A Q++  M      PN V YN++I+GLC
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301

Query: 511 KDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +   L  A+ L +     G L +  TY  L++G+   G + +AF +F  M++  +  N V
Sbjct: 302 QLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 361

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YNIL+N +CK G  + AREL   + + G+ P+   YTT++    K    +E +E   +M
Sbjct: 362 MYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              G  PD  +YN II   L  K     V
Sbjct: 422 EDDGCPPDEFSYNVIIRGFLQHKDESRAV 450



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 223/470 (47%), Gaps = 4/470 (0%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +++ G S +    N  ++   +L  +   + +  + +  G    + TF  +I  L K  K
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             +A+ L+  M+  G  P+   +  IIN  C++G+   A  LF+KM          N VT
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKM---EEAGCQLNVVT 117

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ +I+  CK  RV  A +I   M    I   + TY +LI G       +EA  L +EM 
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
              +MPN V +N  +     EG V  A  VL  M +  + PD  TY+ L  G      V 
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A KL + ++ +    D +SY+ILIN  CK+  +  AKQL + MI +G  P+ ++Y TLI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
            G C+ G +  A  +++NM      PNL  Y  +++G CK   L  A  L +A Q   L 
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + + YN L+N    +G + +A  +FSE+  +G+  N   Y  +IN LCK G   +A E 
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            + M   G  PD  +Y  ++  F ++      + L  +M   G   D  T
Sbjct: 418 FRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 219/456 (48%), Gaps = 4/456 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             + L+    Q+   +  + V+ K    G   +I  +   ++ L K+ +  +  +L+ +M
Sbjct: 12  TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G   +  T+  +I  LCK  +   A  L+ +M ++G   NVV ++ +I+  C+   +
Sbjct: 72  VARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRV 131

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +F     M    + P   T+  +I G C   R + A  +   M    I  NV T+
Sbjct: 132 NEALDIF---SYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTF 188

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+D + + G    A  +   M + G+ P+ V YNS ++      +V  A  +   MI 
Sbjct: 189 NVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMIT 248

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   PD F+YSIL  G C+   + +A +L N+++ +    +  SYN LI+ LC+   L  
Sbjct: 249 KGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLRE 308

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+ L  +M   G +P++ TY  L+DG+CK G +  A +++  M+    KPNLV+YN ++N
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            +CK  +L  A+ L      IGL   +  Y T+ING    G + EA   F  M + G   
Sbjct: 369 AMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPP 428

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           ++  YN++I    +     +A  L+  M   G I D
Sbjct: 429 DEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 198/393 (50%), Gaps = 9/393 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  ++    +IG T  A  + +K++  G  +++  ++  +  L K   +    
Sbjct: 76  CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEAL 135

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            ++  M +      + T+  +I  LC   + +EA +L   M    I PNVV FN++++  
Sbjct: 136 DIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195

Query: 262 CQVGDL---EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           C+ G +   E  LK   +MGV       P+ VT+N ++ G+     V  A ++   MI  
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVE------PDVVTYNSLMYGYSMWTEVVEARKLFDVMITK 249

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   +V +Y+ LI+GY +    +EA +L +EM+ +G  PNNV YN+ IH L   G +  A
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREA 309

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +  +M      P+ +TY+IL  G C+ G + +AF+L   +   ++  +   YNIL+N 
Sbjct: 310 QDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNA 369

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           +CKS NL  A++L S + V GL P++  Y T+I+G CK G ++ A++ + NM+     P+
Sbjct: 370 MCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPD 429

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
              YN II G  +      A  L+   +  G +
Sbjct: 430 EFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 163/350 (46%), Gaps = 23/350 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL-----------------EGLLDSYEI 141
            ++H L  +RR ++AL +  + M A  +SP  F                    LL+    
Sbjct: 120 TLIHSLCKYRRVNEALDIF-SYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178

Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
               P V  F+ LV    + G    A  V++ +   G    +  +N+ +       E+  
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             KL+  M++ G   +V +++++I   CK  +++EA  L+  M+  G  PN V +N +I+
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             CQ+G L  A  LF+ M     +  LPN  T+  +++GFCK G +  A  +  AM    
Sbjct: 299 GLCQLGRLREAQDLFKNMHT---NGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N+  Y  L++   + G+ ++A  L  E+   GL PN  +Y + I+ L  EG ++ AL
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEAL 415

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               +M D    PD F+Y+++ +G  ++    +A  L  ++ +   + DA
Sbjct: 416 EAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDA 465


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 275/560 (49%), Gaps = 24/560 (4%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMS-----ANSVSPLEFLEGLLDSYEICKATPAV 148
           L+S  A++H+L    ++  A  L+ +L+      +   +    L   L+  +  K +  V
Sbjct: 109 LQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNISHRLFNALEDIQSPKFSIGV 168

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+    ++G  E A  V ++++    S +  A    L+ LV+       W  Y+ M+
Sbjct: 169 FSLLIMEFLEMGLFEDALWVSREMRCSPDSKACLA---ILNGLVRRRRFDSVWVDYQLMI 225

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S G V +V+ ++++     K+    +   L   M   G+ PNV  + + I + C+   +E
Sbjct: 226 SRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKME 285

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A K+F  M +     V+PN  T++ +I+G+CK G +  A  +   ++ A +  NV  + 
Sbjct: 286 EAEKMFELMKI---HGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFG 342

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TL+DG+ +      A  L   MVK G+ PN  VYN  IH     G++  A+ +LS+M   
Sbjct: 343 TLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESL 402

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           ++ PD FTY+IL  GLC    + +A +L  ++  E +   + +YN LI+  CK  N+  A
Sbjct: 403 NLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKA 462

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L S M   G+ P+IIT+ TLIDGYCK  NI+ A+ +Y  M      P++V Y ++I+ 
Sbjct: 463 LDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDA 522

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
             K+A++  A  L       G+  +  T+  L++G++  G++++A   + E  N   A  
Sbjct: 523 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLE--NNQAATG 580

Query: 568 K----------VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           K          VG+  LI  LC+ G   +A      M   G+ PD  +Y +++    +  
Sbjct: 581 KSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREK 640

Query: 618 SPEEVIELHDDMVLSGVSPD 637
              + + LH DM+ +G+ P+
Sbjct: 641 RITDTMMLHCDMIKTGILPN 660



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 205/407 (50%), Gaps = 9/407 (2%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F+++I E  ++G  E AL + R+M         P+S     I+NG  +  R +       
Sbjct: 169 FSLLIMEFLEMGLFEDALWVSREM------RCSPDSKACLAILNGLVRRRRFDSVWVDYQ 222

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            MI  G+  +V  Y+ L     + G   +  +L DEM   G+ PN  +Y   I  L  E 
Sbjct: 223 LMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCREN 282

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +E A  +   M    + P+ +TYS +  G C+ G ++QA+ L+ ++L   ++ +   + 
Sbjct: 283 KMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFG 342

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            L++  CK+  L AA+ L   M+  G+ P++  Y  LI G CK GN+  A+ +   M+ +
Sbjct: 343 TLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESL 402

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAE 551
              P++  Y  +INGLC +  L  A  L Q   ++RI    ++TYN+LI+G+     I +
Sbjct: 403 NLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERI-FPSSVTYNSLIHGFCKEYNIEK 461

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  + SEM + G+  N + ++ LI+  CK    + A  L   M + GI+PD VTYTTL+ 
Sbjct: 462 ALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLID 521

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              K  + +E + L+ DM+ +G+ P++ T+  ++     E    D +
Sbjct: 522 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAI 568



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 250/559 (44%), Gaps = 62/559 (11%)

Query: 41  VNLRQRKWKILEQM-APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCA 99
            N+  R +  LE + +P  +  + + ++ EF +      E   WV    R S   ++  A
Sbjct: 146 TNISHRLFNALEDIQSPKFSIGVFSLLIMEFLEMG--LFEDALWVSREMRCSPDSKACLA 203

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------------EGLLDSYEICK 143
           I++ LV  RRFD   +    ++S   V  +                   E LLD      
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG 263

Query: 144 ATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
             P V+     +R   +    E A  + + +K+ G   +++ ++  +    K   + + +
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY 323

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            LYKE++    + NV  F  ++   CK  +L  A SL+  M+K G+ PN+  +N +I+  
Sbjct: 324 GLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQ 383

Query: 262 CQVGDLEFALKLFRKMGV--------------------------------MSGDSVLPNS 289
           C+ G++  A+ L  +M                                  M  + + P+S
Sbjct: 384 CKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSS 443

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+N +I+GFCK   +E A ++   M  +G++ N+ T++TLIDGY +  + + A+ L  E
Sbjct: 444 VTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFE 503

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M  +G++P+ V Y + I   F E +++ AL + SDM++  I P+  T++ L  G  + G 
Sbjct: 504 MTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 563

Query: 410 VKQA--FKLHN------QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           +  A  F L N      + + +        +  LI  LC++  +  A +  S M   G+ 
Sbjct: 564 LSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVT 623

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PDI +Y +++  + +   I   + ++ +M K    PNL++ N ++    ++     +   
Sbjct: 624 PDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV-NQLLAMFYQENGYLRSACF 682

Query: 522 LQASQRIGLLDAITYNTLI 540
           L  S R+G +   T N++ 
Sbjct: 683 LTNSSRLGTIFKNTCNSIF 701


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 175/697 (25%), Positives = 312/697 (44%), Gaps = 80/697 (11%)

Query: 7   NCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSL---- 62
           NC  KS+ P S  F           + +V   I +     KW+  + +    T S     
Sbjct: 14  NCKPKSSPPFSIPFR-------GEIKRLVNDTIQILKSHEKWE--QSLQTHFTESDIPII 64

Query: 63  -VNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV--NWRRFDDALLLMGN 119
            V   V +     +L L+F+ W  +N+  S SL  +     L +   +R F +    +  
Sbjct: 65  DVTHFVLDRINDVELGLKFFDWASKNS-LSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEE 123

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           + +  ++   E L  +L +Y                   +G  + A +V   + VK H+ 
Sbjct: 124 MKTKETIPTREALSDVLCAY-----------------ADVGLVDKALEVYHGV-VKLHNS 165

Query: 180 --SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV----NTFNLVIYALCKECKLE 233
             S +A N+ L+ LVK   I    +LY EM+     +++     T ++++  LC + ++E
Sbjct: 166 LPSTYACNSLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIE 225

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           + + L       G  PN+V +N +I+  C+ G++E A KLF+K+  M G   +P   T  
Sbjct: 226 DGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLK-MKG--FIPTLQTFG 282

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR---------------------------- 325
            ++NGFCK+G  E  + +   M   G+  NV+                            
Sbjct: 283 SLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSEN 342

Query: 326 -------TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
                  TY TLI+ +   G  EEA +L ++ ++RGL PN + Y   +H    +G+   A
Sbjct: 343 CCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKA 402

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
              L +M    +  D  +Y  L  GL   G V  A  + ++++   ++ DA  YN+L+N 
Sbjct: 403 TDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNG 462

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           L K   L+ AK +L+ M+ + + PD   Y TL+DG+ + GN++ A ++++ + +    P 
Sbjct: 463 LFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPG 522

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFS 557
           +V YN +I G  K   +D A   +   +R   + D  T++T+I+GY     +     +F 
Sbjct: 523 VVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFG 582

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            M       N V Y  LIN  C+ G  + A +L  +M  HG+ P  VTY+ L+  F K  
Sbjct: 583 LMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEA 642

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
              + +   + M+++  +P++  ++ +++     K+ 
Sbjct: 643 KLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKAT 679



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 224/452 (49%), Gaps = 10/452 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    + G  E AY + +KLK+KG   ++  + + ++   K+       
Sbjct: 239 CVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAID 298

Query: 202 KLYKEMVSCGYVENVNTFNLVI---YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
            L  EM   G   NV  +N +I   Y L  + K ++ L     M ++   P++V +N +I
Sbjct: 299 LLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLK---EMSENCCEPDLVTYNTLI 355

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N  C  G++E A KL  +  +  G  + PN +T+  +++G+CK G    A +    M  +
Sbjct: 356 NHFCSRGEVEEAEKLLEQT-IRRG--LAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTS 412

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G++ ++ +Y  LI G    G  + AL + D M+ RG++P+  +YN  ++ LF +G +  A
Sbjct: 413 GLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMA 472

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L++M+D++I PD F Y+ L  G  R+G + +A KL   ++E+ +      YN++I  
Sbjct: 473 KVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKG 532

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
             KS  +  A   +  M     +PDI T+ T+IDGY K  N+   ++++  M K   KPN
Sbjct: 533 FSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPN 592

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFS 557
           +V Y S+ING C+      A+ L    +  GL  + +TY+ LI  +    K+ +A + F 
Sbjct: 593 VVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFE 652

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
            M       N   ++ L+N          +RE
Sbjct: 653 LMLINKCTPNDAAFHYLVNGFTNTKATAVSRE 684



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/505 (22%), Positives = 217/505 (42%), Gaps = 53/505 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +++ ++ A  ++G    A D ++++        +  +N  ++H     E+    KL ++ 
Sbjct: 315 MYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQT 374

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N  T+  +++  CK+ +  +A      M  SG+  +++ +  +I+     G++
Sbjct: 375 IRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEV 434

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL +  +M       +LP++  +N ++NG  K G++  A+ +   M+   I  +   Y
Sbjct: 435 DTALTIRDRM---MNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVY 491

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           ATL+DG+ R G+ +EA +L   ++++GL P  V YN  I      G ++ A+  +  M  
Sbjct: 492 ATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRR 551

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            H  PD FT+S +  G  +   +    K+   +++++   +  +Y  LIN  C+      
Sbjct: 552 AHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKM 611

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM----------------- 490
           A++L S M   GL P ++TY  LI  +CK   +  AV  +E M                 
Sbjct: 612 AEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVN 671

Query: 491 -------KKVEKKPN-------------------------LVIYNSIINGLCKDASLDAA 518
                    V ++PN                            YN I+  LC+   +  A
Sbjct: 672 GFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTA 731

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L       GL  DA+++  LI+G  + G   E   M S   N G     + Y++ ++ 
Sbjct: 732 LQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDK 791

Query: 578 LCKFGCYQQARELMKVMILHGIIPD 602
               G   +A  +++ MI   + P+
Sbjct: 792 FIPEGGISEASGILQAMIKGYVSPN 816


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 241/512 (47%), Gaps = 21/512 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F  L+R   +    E A  ++ ++K  G       +N  +S   K  + G+ +
Sbjct: 38  CQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 97

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K   EMV    +  V T+  ++  LCK  +  +A+ L   M   G  PN+  +N+I+   
Sbjct: 98  KFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGL 157

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   L+ A K+  +M V       P+ VT+N  I G CK  RV+   E R  + +  + 
Sbjct: 158 CEERKLDEAKKMLEEMAVRG---YFPDVVTYNSFIKGLCKCDRVD---EARKFLARMPVT 211

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V +Y T+I+G  + G  + A R+ D M  RG  P+ V Y+S I      G+VE A+ +
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 271

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+     P+   Y+ L   L R G + +A  +  ++       D  SYN  I+ LCK
Sbjct: 272 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 331

Query: 442 SNNLAAAKQLLSSMIVRGLIP----------DIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +  +  AK +   M+ RG  P          DI+ Y  L+DG CKGG  + A  ++   K
Sbjct: 332 AERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFS--K 389

Query: 492 KVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGK 548
            +++K   P++  YN +++  CK   +D A  + +        + +T+N L++G  ++ +
Sbjct: 390 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDR 449

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +++A  M   M + G   + V Y  L++ +CK G    A EL +  +  G +PD VTY+ 
Sbjct: 450 LSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSA 509

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           L+T        EE   L   +V     PD++T
Sbjct: 510 LITGLVHENMAEEAYLLFTKLVERRWVPDDKT 541



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 245/527 (46%), Gaps = 87/527 (16%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  NV T+N ++  L +E + ++A +++  M+     P+   F +++   C+   LE A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            KL  +M  M     +P+   +N +I+G+ K      A +    M+K      V TY  +
Sbjct: 62  RKLLGRMKEMG---CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNI 118

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           +DG  +   + +A++L DEM  +G  PN   YN  +  L  E  ++ A  +L +M  +  
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  TY+   KGLC+   V +A K   ++    +  D  SY  +IN LCKS +L +A +
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASR 235

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI----- 505
           +L  M  RG  PD++TY +LIDG+CKGG +E A+ + ++M K+  +PN+V YNS+     
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295

Query: 506 ------------------------------INGLCKDASLDAAKSLLQ-----------A 524
                                         I+GLCK   +  AK++             +
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM-----------------------RN 561
           S  + ++D + Y  L++G    G+  EA A+FS++                       R 
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 562 VGIAV------------NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
           +  A+            N V +NIL++ LC       A  ++  M+  G IPD+VTY TL
Sbjct: 416 IDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           V    K       +EL ++ V  G  PD  TY+A+I+ L+ E  AE+
Sbjct: 476 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 522


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 236/504 (46%), Gaps = 43/504 (8%)

Query: 185 NNFLSHLVKLNEIGRFWK-LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           N  L+ L     +G     L + M   G + +  ++N+++  LC E + EEAL L + M 
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192

Query: 244 KSGIW---PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
              +W   PNVV ++ +IN     G ++    LF +M       + P+ VT+  +I+G C
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEM---MDRGIPPDVVTYTTVIDGLC 249

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K    + AE +   MI  G+  N+ TY  LI GY   G  +E +R+ +EM   G  PN  
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCC 309

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC----------- 409
            Y S +++L   G    A F    MI K I P   TY I+  G    G            
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369

Query: 410 ------------------------VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                                   + +A  + N++ ++ +  DA SY  LI+ LCK   +
Sbjct: 370 VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRV 429

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A+   + MI  G+ PDI+ + +L+ G C     E   +++  M  V   PN+V +N+I
Sbjct: 430 DDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTI 489

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           +  LCK+  +   + L+ + + +G+  D I+YNTLI+G+ + G I EA  +   M +VG+
Sbjct: 490 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 549

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             +   YN L++  CK G    A    + M+ +GI P  VTY T++    +     E  E
Sbjct: 550 KPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 609

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           L+ +M+ SG   D  TYN I++ L
Sbjct: 610 LYLNMINSGTKWDIYTYNIILNGL 633



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 146/602 (24%), Positives = 260/602 (43%), Gaps = 83/602 (13%)

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           NLM AN +SP                   +F+    A  + G  + A D+  K++ +G S
Sbjct: 367 NLMVANGISP----------------NHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLS 410

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
               ++   +  L KL  +      + +M++ G   ++  F+ ++Y LC   K E+   L
Sbjct: 411 PDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEEL 470

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           ++ ML  GI PN+V FN I+   C+ G +    +L   +  M    V P+ +++N +I+G
Sbjct: 471 FFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMG---VRPDVISYNTLIDG 527

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            C  G ++ A ++   M+  G+  +  +Y TL+ GY + G  + A     +M+  G+ P 
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V YN+ +H LF       A  +  +MI+     D +TY+I+  GLC++ CV +A K+  
Sbjct: 588 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQ 647

Query: 419 QVLEEHMVGDAYSYNILINYLCKSN------NLAAA------------------------ 448
            +  + +  +  ++NI+I  L K        +L AA                        
Sbjct: 648 NLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG 707

Query: 449 -----KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA-------------------- 483
                  L S+M   G  P+      L+      G+I  A                    
Sbjct: 708 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS 767

Query: 484 -------VQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDAAKSLLQASQRIGLL-DAI 534
                     Y++  K   K   ++  +  + L K A  +D A SL +     GL  D +
Sbjct: 768 MLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVV 827

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYNT+++G F  G+ +EA  ++  M N    +N   YNI++N LCK  C  +A ++ + +
Sbjct: 828 TYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSL 887

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
              G+  + +T+  ++    K    E+ ++L   +  +G+ PD  TY  +   L+ E S 
Sbjct: 888 CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSL 947

Query: 655 ED 656
           E+
Sbjct: 948 EE 949



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 245/535 (45%), Gaps = 32/535 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K +   +  ++      GA    +D++  +   G S + H +N F S   K   I +   
Sbjct: 340 KPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMD 399

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +M   G   +  ++  +I ALCK  ++++A   + +M+  G+ P++V F+ ++   C
Sbjct: 400 IFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLC 459

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            V   E   +LF +M  +    + PN V  N I+   CK GRV   + +  ++   G+  
Sbjct: 460 TVDKWEKVEELFFEMLNVG---IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRP 516

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V +Y TLIDG+   G+ +EA +L + MV  GL P++  YN+ +H     G ++ A    
Sbjct: 517 DVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHF 576

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+   I P   TY+ +  GL +     +A +L+  ++      D Y+YNI++N LCKS
Sbjct: 577 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKS 636

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           N +  A ++  ++  +GL  +IIT+  +I    KGG  E A+ ++  +       N+V Y
Sbjct: 637 NCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTY 696

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             ++  L ++ SL+   SL  A ++ G   ++   N L+      G I+ A A  S++  
Sbjct: 697 RLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 756

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKV---------------------------- 593
              +V     ++LI+          A+ L K                             
Sbjct: 757 RNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFRE 816

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           M++ G+ PD VTY T++    +     E  EL+  M+ S    +  TYN I++ L
Sbjct: 817 MLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGL 871



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/471 (22%), Positives = 206/471 (43%), Gaps = 41/471 (8%)

Query: 149  FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            ++ L+    + G  + AY   +K+   G +  +  +N  L  L +        +LY  M+
Sbjct: 556  YNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMI 615

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
            + G   ++ T+N+++  LCK   ++EA+ ++  +   G+  N++ FN++I    + G  E
Sbjct: 616  NSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675

Query: 269  FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
             A+ LF     +  + ++ N VT+  ++    + G +E  + +  AM K G   N +   
Sbjct: 676  DAMDLF---AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 732

Query: 329  TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL---FAEGD----------- 374
             L+      G    A     ++ +R    N  V  ST   L   F+  +           
Sbjct: 733  ALVRRLLHRGDISRAGAYLSKLDER----NFSVEASTTSMLISIFSSDEYQHHAKSLPKK 788

Query: 375  ------------------VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
                              ++ A  +  +M+ K + PD  TY+ +  GL + G   +A +L
Sbjct: 789  YRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848

Query: 417  HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +  ++      + Y+YNI++N LCKSN +  A ++  S+  +GL  +IIT+  +I    K
Sbjct: 849  YLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLK 908

Query: 477  GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
            GG  E A+ ++  +      P++V Y  +   L ++ SL+    L    ++ G  LD+  
Sbjct: 909  GGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRL 968

Query: 536  YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
             N L+      G I+ A A  S++     ++     + LI+   + G YQ 
Sbjct: 969  LNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSR-GEYQH 1018


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 213/401 (53%), Gaps = 9/401 (2%)

Query: 179 VSIHAWNNFLSHLVKLN--EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           V +    N L  +V+L   E+ R W  Y E++  GY  N   FN++++  CK   +  A 
Sbjct: 103 VPVQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSAR 162

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            ++  + K G+ P VV FN +I+  C+ G +E     FR  GVM  + V P+  T + +I
Sbjct: 163 LVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG---FRLKGVMESERVCPDVFTFSALI 219

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           NG CK GR++    +   M   G+  N  T+  LIDG  +GG  + AL+    M+ +G+ 
Sbjct: 220 NGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVR 279

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ V YN+ I+ L   GD++ A  ++++M    + PD  T++ L  G C+ G ++ A ++
Sbjct: 280 PDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEI 339

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             +++EE +  D  ++ +LI+ LC+   +  A+++L  M+  G  PD  TY  ++D +CK
Sbjct: 340 KRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCK 399

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
            GN+    ++ + M+     P +V YN+++NGLCK   +  AK LL A   +G+  + IT
Sbjct: 400 KGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDIT 459

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           YN L+ G+  +G   +     SE    G+  +   Y  L+N
Sbjct: 460 YNILLEGHSKHGSSVDVDIFNSEK---GLVKDYASYTALVN 497



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 197/373 (52%), Gaps = 6/373 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN    N +++GFCK+G V  A  +   + K G+   V ++ TLI G  + G+ EE  RL
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M    + P+   +++ I+ L  EG ++    +  +M  K + P+  T+++L  G C+
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V  A K    +L + +  D  +YN LIN LCK  +L  A++L++ M   GL PD IT
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           + TLIDG CK G++E A+++   M +   + + V +  +I+GLC+D  +  A+ +L+   
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G   D  TY  +++ +   G +   F +  EM++ G     V YN L+N LCK G  +
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVK 439

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A+ L+  M+  G+ P+ +TY  L+   SK+ S  +V   + +    G+  D  +Y A++
Sbjct: 440 NAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSE---KGLVKDYASYTALV 496

Query: 646 SPLLGEKSAEDQV 658
           +     K+++D +
Sbjct: 497 NE--SSKTSKDHL 507



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 174/331 (52%), Gaps = 3/331 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+    ++G    A  V  ++  +G   ++ ++N  +S   K   +   ++L   M 
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S     +V TF+ +I  LCKE +L+E   L+  M   G+ PN V F ++I+  C+ G ++
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            ALK F+   +M    V P+ VT+N +ING CK+G ++ A  +   M  +G+  +  T+ 
Sbjct: 265 LALKNFQ---MMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFT 321

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLIDG  + G  E AL +   MV+ G+  ++V +   I  L  +G V  A  +L DM+  
Sbjct: 322 TLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSA 381

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  TY+++    C+ G V   FKL  ++  +  V    +YN L+N LCK   +  A
Sbjct: 382 GFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNA 441

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           K LL +M+  G+ P+ ITY  L++G+ K G+
Sbjct: 442 KMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 182/366 (49%), Gaps = 5/366 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G+  +   +N  +    K+  +G    ++ E+   G    V +FN +I   CK   +EE 
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             L   M    + P+V  F+ +IN  C+ G L+    LF +   M G  ++PN VT   +
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDE---MCGKGLVPNGVTFTVL 253

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G CK G+V+ A +    M+  G+  ++ TY  LI+G  + G  +EA RL +EM   GL
Sbjct: 254 IDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGL 313

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+ + + + I      GD+E AL +   M+++ I  D   +++L  GLCR+G V  A +
Sbjct: 314 RPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAER 373

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +   +L      D  +Y ++++  CK  N+    +LL  M   G +P ++TY  L++G C
Sbjct: 374 MLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLC 433

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT 535
           K G ++ A  + + M  V   PN + YN ++ G  K  S  +    +  S++  + D  +
Sbjct: 434 KQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS--SVDVDIFNSEKGLVKDYAS 491

Query: 536 YNTLIN 541
           Y  L+N
Sbjct: 492 YTALVN 497



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 1/301 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E++  G  PN   +N  +H     G V  A  V  ++  + + P   +++ L  G C+ G
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V++ F+L   +  E +  D ++++ LIN LCK   L     L   M  +GL+P+ +T+ 
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFT 251

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            LIDG CKGG ++ A++ ++ M     +P+LV YN++INGLCK   L  A+ L+      
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS 311

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D IT+ TLI+G    G +  A  +   M   GI ++ V + +LI+ LC+ G    A
Sbjct: 312 GLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA 371

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             +++ M+  G  PD  TYT +V  F K  +     +L  +M   G  P   TYNA+++ 
Sbjct: 372 ERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNG 431

Query: 648 L 648
           L
Sbjct: 432 L 432



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 171/332 (51%), Gaps = 1/332 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           ++ +G   N   +  L+ G+ + G    A  + DE+ KRGL P  V +N+ I      G 
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGA 192

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           VE    +   M  + +CPD FT+S L  GLC+ G + +   L +++  + +V +  ++ +
Sbjct: 193 VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTV 252

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK   +  A +    M+ +G+ PD++TY  LI+G CK G+++ A ++   M    
Sbjct: 253 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASG 312

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            +P+ + + ++I+G CK   +++A  + +     G+ LD + +  LI+G   +G++ +A 
Sbjct: 313 LRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAE 372

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            M  +M + G   +   Y ++++  CK G      +L+K M   G +P  VTY  L+   
Sbjct: 373 RMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGL 432

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            K    +    L D M+  GV+P++ TYN ++
Sbjct: 433 CKQGQVKNAKMLLDAMLNVGVAPNDITYNILL 464



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 160/330 (48%), Gaps = 6/330 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   F+ L+  C + GA E  + +   ++ +     +  ++  ++ L K   +     
Sbjct: 174 RPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSL 233

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EM   G V N  TF ++I   CK  K++ AL  +  ML  G+ P++V +N +IN  C
Sbjct: 234 LFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLC 293

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +VGDL+ A +L  +   MS   + P+ +T   +I+G CK G +E A EI+  M++ GI+ 
Sbjct: 294 KVGDLKEARRLVNE---MSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIEL 350

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +   +  LI G  R G   +A R+  +M+  G  P++  Y   +     +G+V     +L
Sbjct: 351 DDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLL 410

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M      P   TY+ L  GLC+ G VK A  L + +L   +  +  +YNIL+    K 
Sbjct: 411 KEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKH 470

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
            +        S    +GL+ D  +Y  L++
Sbjct: 471 GSSVDVDIFNSE---KGLVKDYASYTALVN 497



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 130/248 (52%), Gaps = 1/248 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +++++  + +VL+     + + +N+L++  CK   + +A+ +   +  RGL P ++++ T
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G CK G +E   ++   M+     P++  ++++INGLCK+  LD    L       G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L+ + +T+  LI+G    GK+  A   F  M   G+  + V YN LIN LCK G  ++AR
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L+  M   G+ PD +T+TTL+    K    E  +E+   MV  G+  D+  +  +IS L
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 649 LGEKSAED 656
             +    D
Sbjct: 363 CRDGRVHD 370



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 52/104 (50%)

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++  ++A + E+ + G   N   +N+L++  CK G    AR +   +   G+ P  V++ 
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           TL++   K  + EE   L   M    V PD  T++A+I+ L  E
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKE 225


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 228/431 (52%), Gaps = 6/431 (1%)

Query: 81  YTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLD 137
           +TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       +L+
Sbjct: 1   FTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILE 60

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           +    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL   
Sbjct: 61  TKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYF 120

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
              W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N +
Sbjct: 121 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 180

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           +N   ++G L+     FR    M    VLP+  T++ +ING CK  +++ A E+   M+ 
Sbjct: 181 MNGYIRLGHLDEG---FRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLV 237

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+  N  T+ TLIDG+ + G  + A+ +   M+ + L+P+ + YN+ I+ L  +GD++ 
Sbjct: 238 KGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 297

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  ++ +M  K + PD FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+
Sbjct: 298 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALIS 357

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P
Sbjct: 358 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAP 417

Query: 498 NLVIYNSIING 508
           ++V YN ++NG
Sbjct: 418 SVVTYNVLMNG 428



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 161/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 128 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 187

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   ++ D Y+Y++LIN LCK + +  A +L   M+V+GLIP+ +T+
Sbjct: 188 GHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 247

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 248 TTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 307

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 308 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVD 367

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M  +G +P   TYN +++
Sbjct: 368 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 427



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 161/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 143 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLA 202

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G++P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 203 SGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDF 262

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ ++L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 263 AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 322

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 323 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKP 382

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G A + V YN+L+N
Sbjct: 383 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 427



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 121 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 180

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M      P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 181 MNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 240

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++  M +  +  + + YN LI  LCK G  +QA +
Sbjct: 241 IPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 300

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 301 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLC 360

Query: 650 GEKSAED 656
            E  + D
Sbjct: 361 QEGRSVD 367


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 162/630 (25%), Positives = 285/630 (45%), Gaps = 78/630 (12%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           L+ + P++T S V+ + S     P  AL+F  W+ +   F H+++S  +++         
Sbjct: 59  LKSLLPAITPSHVSSLFS-LNLDPHTALQFSYWISQTPNFKHNVDSYASLL--------- 108

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
                                   L+D ++I    P +  ++++ C          D+ +
Sbjct: 109 -----------------------TLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVSDICR 145

Query: 171 KL-KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           K+ K     +S+  +N  L+ L +   +    +LY EM+      ++ TFNL+I   CK 
Sbjct: 146 KMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKM 205

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
             ++EA     +M+++G+ P+       I   C+  D++ A ++F +M          N 
Sbjct: 206 GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR-------NE 258

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC---NVRTYATLIDGYARGGSSEEALRL 346
           V++N +I+G C+ GR++ A  +    ++   DC   NV TY  LI G  R  +  +A+ L
Sbjct: 259 VSYNQLIHGLCEAGRIDEAVSL---FVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGL 314

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            DEM++R L+P+ + YNS I      G ++ A  +LS M ++ + PD  TY      LC+
Sbjct: 315 LDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCK 374

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +  V++A +L + + EE +  +   Y++LI+  CK   +  A  L   M+ +   P+  T
Sbjct: 375 SNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYT 434

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  LI G C  GN++ A+ +++ M K+  KP +  +N +I  + K    D A   LQ   
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494

Query: 527 RIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G    A TYN  I  Y   GK+ EA  M  +M+  G+  +   Y  LI    K G   
Sbjct: 495 SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTY 554

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTR-FSKNCSPEE----------------------- 621
            A +++K M      P + T+ +L+ + F K    E+                       
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKM 614

Query: 622 -----VIELHDDMVLSGVSPDNQTYNAIIS 646
                VIEL ++M   G +PD++ Y  +IS
Sbjct: 615 MEFDIVIELFEEMEKHGCTPDSKCYEKLIS 644



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 210/483 (43%), Gaps = 12/483 (2%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GLLD        P +  +++L+    + G  + AY ++  +K +G       +  F+  L
Sbjct: 313 GLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFL 372

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K N +    +L+  +   G   NV  ++++I   CK  K++EA  L+ +ML     PN 
Sbjct: 373 CKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNA 432

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN +I+  C  G+L+ AL LF +M  M    + P   T N +I    K G  + A + 
Sbjct: 433 YTFNALIHGLCSAGNLKEALSLFDQMVKMG---LKPTVYTFNILIGRMLKQGDFDDAHKC 489

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M+ +G     RTY   I+ Y   G  +EA  +  +M + G+ P++  Y S I     
Sbjct: 490 LQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGK 549

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G    A  VL  M D    P H T+  L K L     V +       V      GD   
Sbjct: 550 LGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEK-SGETGVESVSNFGDVPG 608

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            N+      K        +L   M   G  PD   Y  LI G CK  N+  A+++ + M+
Sbjct: 609 SNMW-----KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQ 663

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITY-NTLINGYFINGKIA 550
           K    P+ +++N++I+  CK      A ++++     G    + +  TLI G +  G+  
Sbjct: 664 KEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETE 723

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
              ++F ++R  G   +++ + ILI+ + K G  ++  +L + M  +G      TY+ L 
Sbjct: 724 RGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILT 783

Query: 611 TRF 613
            + 
Sbjct: 784 QKL 786



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 202/452 (44%), Gaps = 41/452 (9%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDS----YEICKATPAVFDALVRAC-----TQIGATEGAY 166
           L+ +L++ NS+   +   G LDS      + K    V D     C      +    E A 
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEAR 382

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
            +   L  +G S ++  ++  +    K+ ++     L+++M+S     N  TFN +I+ L
Sbjct: 383 RLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGL 442

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C    L+EALSL+ +M+K G+ P V  FN++I    + GD + A K  +KM + SG+   
Sbjct: 443 CSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM-MSSGEK-- 499

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P + T+N  I  +C  G+V+ AE++   M + G+  +  TY +LI  Y + G +  A  +
Sbjct: 500 PVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDV 559

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAE------------------GDVEGA---------- 378
              M      P++  + S I  LF +                  GDV G+          
Sbjct: 560 LKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDI 619

Query: 379 LFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           +  L + ++KH C PD   Y  L  G+C+   +  A KL +Q+ +E +      +N +I+
Sbjct: 620 VIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVIS 679

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             CK      A  ++  MI  G  P +    TLI G  + G  E    V++ ++      
Sbjct: 680 CCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYND 739

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           + + +  +I+G+ K   ++    L +  ++ G
Sbjct: 740 DEIAWKILIDGMLKQGLVEEFSQLFEEMEKNG 771



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 74/330 (22%)

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ L   L R G V +  +L+ ++LEE +  D Y++N++IN  CK   +  AKQ +  MI
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             GL PD  T  + I GYC+  +++ A +V+E M       N V YN +I+GLC+   +D
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275

Query: 517 AAKSLL-------------------------QASQRIGLLDA----------ITYNTLIN 541
            A SL                             + +GLLD           ITYN+LI 
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIA 335

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    G +  A+ + S M+  G+  ++  Y   I+FLCK    ++AR L   +   G+  
Sbjct: 336 GQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSA 395

Query: 602 DYVTYTTLVTRF-----------------SKNCSP------------------EEVIELH 626
           + + Y+ L+  +                 SKNCSP                  +E + L 
Sbjct: 396 NVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLF 455

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           D MV  G+ P   T+N +I  +L +   +D
Sbjct: 456 DQMVKMGLKPTVYTFNILIGRMLKQGDFDD 485


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/427 (32%), Positives = 215/427 (50%), Gaps = 11/427 (2%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL-------EFALKLFRKMGVMSGDSVLP 287
           A  L+ +ML  G+  +V   N+ I+   +  D        E+ LKL  +M +     + P
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQI---KGLKP 221

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+N +I   CK G+V  AE +   MI  GI  +   Y TLIDG+ + G+   A RL 
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           DEM KR + P+ + Y + I  L   G V  A  +  +M+ K + PD  TY+ L  G C+ 
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +K+AF LHNQ+L+  +  +  +Y  L + LCK   +  A +LL  M  +GL  +I TY
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQ 526
            +L++G CK GNI+ AV++ ++M+     P+ V Y ++++  CK   +  A  LL Q   
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 461

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R      +T+N L+NG+ ++G + +   +   M   GI  N   YN LI   C     + 
Sbjct: 462 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 521

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             E+ + M   G++PD  TY  L+    K  + +E   LH DMV  G +    +YNA+I 
Sbjct: 522 TTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIK 581

Query: 647 PLLGEKS 653
                K 
Sbjct: 582 GFYKRKK 588



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 224/449 (49%), Gaps = 11/449 (2%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKEC-------KLEEALSLYYRMLKSGIWPNVVCF 254
           KL+ +M++ G + +V++ NL I  L ++        K E  L L   M   G+ PN   +
Sbjct: 167 KLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTY 226

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +I   C+ G +  A ++ R+M     + + P+ V +  +I+GFCKLG V  A  +   
Sbjct: 227 NGVILLLCKTGKVAEAERVLREM---ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 283

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M K  I  +  TY  +I G  + G   EA +L  EMV + L P+ V Y + I     EG 
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 343

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  + + M+   + P+  TY+ L  GLC+ G V  A +L +++  + +  + Y+YN 
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+N LCK+ N+  A +L+  M V G  PD +TY TL+D YCK   +  A ++   M   E
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
            +P +V +N ++NG C    L+  + LL+     G++ +A TYN+LI  Y I   +    
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            ++  M   G+  +   YNILI   CK    ++A  L + M+  G      +Y  L+  F
Sbjct: 524 EIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGF 583

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
            K     E  EL + M   G+  D + YN
Sbjct: 584 YKRKKFLEARELFEQMRREGLVADREIYN 612



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 270/591 (45%), Gaps = 21/591 (3%)

Query: 33  DIVFRAICVNLRQRK----WKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENN 88
           ++V R I + ++QR+     ++L+          +  V+   +   +L L F+ W     
Sbjct: 64  ELVHR-ISIAIKQRRSEPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACL-- 120

Query: 89  RFSHSLESSCAIVHLLVNWRRFDDALLLMGNL-MSANSVSPLEFLE---------GLLDS 138
           R   SLE+ C +  +    +    A  L+ +  ++ N    + F           GLL S
Sbjct: 121 RRDPSLEARCIVAQIATASKDLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLIS 180

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
            + C    +     +         E    +I+++++KG   + + +N  +  L K  ++ 
Sbjct: 181 VDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVA 240

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
              ++ +EM+S G   +   +  +I   CK   +  A  L+  M K  I P+ + +  +I
Sbjct: 241 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 300

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              CQ G +  A KLF +M       + P+ VT+  +I+G+CK G+++ A  +   M++ 
Sbjct: 301 CGLCQTGRVMEADKLFHEMVC---KRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 357

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  N+ TY  L DG  + G  + A  L  EM ++GL  N   YNS ++ L   G+++ A
Sbjct: 358 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 417

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
           + ++ DM      PD  TY+ L    C++  + +A +L  Q+L+  +     ++N+L+N 
Sbjct: 418 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 477

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C S  L   ++LL  M+ +G++P+  TY +LI  YC   N+    ++Y  M      P+
Sbjct: 478 FCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPD 537

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
              YN +I G CK  ++  A  L +     G  L   +YN LI G++   K  EA  +F 
Sbjct: 538 GNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFE 597

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +MR  G+  ++  YNI  +     G  +   EL    I   ++ D  T  T
Sbjct: 598 QMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/610 (25%), Positives = 295/610 (48%), Gaps = 11/610 (1%)

Query: 43  LRQRKWK---ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCA 99
           L Q +W+       + PSLT + ++ + +     P  AL F+ W+   + F H++ S   
Sbjct: 49  LLQPQWRKNPSFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQP 108

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLE--FLEGLLDSYEICKATPAVFDALVRACT 157
           ++ +LV    F  A   + N M  + VS  E  F+  LL  +E   +  + ++ L    +
Sbjct: 109 LLFILVR-NGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTS-YNRLFMVLS 166

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           + G  +    + + +   G   ++ ++N  ++   K+  +      +  ++  G+  +  
Sbjct: 167 RFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSF 226

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+  +I   CK  +L +A  ++  M + G   N V +  +I+  C+VG ++ AL+LF + 
Sbjct: 227 TYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQ- 285

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M  D   P+  T+  ++  FC++G+   A +    M++ GI+ NV TY  LID + + 
Sbjct: 286 --MKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKV 343

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +E + +   M+++GL+ + V +N+ I      G +E A+ VL  M    +CP+  TY
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G CR   + +A  L N++ E  +  +  +YN LI+ LCK+  + +A +L   MI 
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G +PD  T+   ID  CK G +E A QV+E++K+   + N  +Y ++I+G CK      
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSD 523

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  L +     G   ++IT+N L++G    GK+ +A ++   M           Y ILI 
Sbjct: 524 AHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIE 583

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            + +   + +A   +  MI  G  P+ VTYT  +  + +     E  E+   +   G+  
Sbjct: 584 EILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILL 643

Query: 637 DNQTYNAIIS 646
           D+  Y+ +++
Sbjct: 644 DSFIYDVLVN 653



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 225/494 (45%), Gaps = 56/494 (11%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN-----------------VVC 253
           G++  V+++  +++ L +   L  A ++   M+KS +  +                 V  
Sbjct: 98  GFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTS 157

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +N +     + G ++    LF+ M     D V PN ++ N ++N  CK+G V  A+    
Sbjct: 158 YNRLFMVLSRFGLIDELNCLFKDM---LNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFC 214

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            ++K G  C+  TY +LI GY +     +A ++ + M + G + N V Y + IH     G
Sbjct: 215 GLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVG 274

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ AL +   M +    PD  TY++L    C  G   +A K   +++E  +  + Y+Y 
Sbjct: 275 KIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT 334

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           +LI+Y CK   +    ++LS+M+ +GL+  ++ +  LIDGYCK G +E A+ V ++MK  
Sbjct: 335 VLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLN 394

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY--------- 543
           +  PN   YN +I G C+  S+D A +LL       L  + +TYNTLI+G          
Sbjct: 395 KVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSA 454

Query: 544 ---------------------FIN-----GKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
                                FI+     GK+ +A  +F  ++      N+  Y  LI+ 
Sbjct: 455 WRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            CK   +  A  L K M+  G  P+ +T+  L+    K    E+ + L D M      P 
Sbjct: 515 YCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPT 574

Query: 638 NQTYNAIISPLLGE 651
             TY  +I  +L E
Sbjct: 575 VHTYTILIEEILRE 588



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 240/534 (44%), Gaps = 30/534 (5%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C      +  L+    ++G  + A ++  ++K  G    +  +   ++   ++ +   
Sbjct: 254 EGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETE 313

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             K ++EMV  G   NV T+ ++I   CK  K++E + +   ML+ G+  +VV FN +I+
Sbjct: 314 ALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G +E A+ +   M +   + V PNS T+N +I GFC+   ++ A  +   M +  
Sbjct: 374 GYCKRGMMEDAICVLDSMKL---NKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N+ TY TLI G  +    + A RL   M+K G +P+   + + I  L   G VE A 
Sbjct: 431 LSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAH 490

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V   + +KH   + F Y+ L  G C+      A  L  ++L E    ++ ++N+L++ L
Sbjct: 491 QVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGL 550

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K   +  A  L+  M      P + TY  LI+   +  + + A    + M     +PN+
Sbjct: 551 RKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNV 610

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSE 558
           V Y + I   C+   L  A+ ++   +  G LLD+  Y+ L+N Y   G++  AF +   
Sbjct: 611 VTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIR 670

Query: 559 MRNVGIAVNKVGYNILINFLC--------------------------KFGCYQQARELMK 592
           M + G   ++  Y+IL+  L                           K   ++    L +
Sbjct: 671 MFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFE 730

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M+  G +P+  TY+ L+    K         L + M  SG+SP    +N+++S
Sbjct: 731 KMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 232/524 (44%), Gaps = 19/524 (3%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           +E L  +L+   +    P  F+AL+    + G  E A  V+  +K+     +   +N  +
Sbjct: 350 MEMLSTMLEKGLVSSVVP--FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELI 407

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               +   + R   L  +M       N+ T+N +I+ LCK   ++ A  L++ M+K G  
Sbjct: 408 CGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFV 467

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+   F   I+  C++G +E A ++F  +     ++   N   +  +I+G+CK  +   A
Sbjct: 468 PDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEA---NEFLYTALIDGYCKAEKFSDA 524

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             +   M+  G   N  T+  L+DG  + G  E+A+ L D M K    P    Y   I  
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           +  E D + A   L  MI     P+  TY+   K  CR G + +A ++  ++ EE ++ D
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           ++ Y++L+N       L +A  +L  M   G  P   TY  L+              ++E
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL-----------IFE 693

Query: 489 NMKKVEKKPNLVIYN-SIING-LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFI 545
              K     +L   N S+ N  + K A  +    L +     G +  + TY+ LI G   
Sbjct: 694 KYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCK 753

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
              ++ AF +F+ M+  GI+ ++  +N L++  CK G +++A  L+  M+ +  +    +
Sbjct: 754 VEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLES 813

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           Y  LV    +  + E+  E+   ++  G + D   +  ++  L+
Sbjct: 814 YKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLV 857



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 194/468 (41%), Gaps = 46/468 (9%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA 147
           N+ S +L +   ++H L   R  D A  L  +LM  +   P        D    C     
Sbjct: 429 NKLSPNLVTYNTLIHGLCKARVVDSAWRL-HHLMIKDGFVP--------DQRTFC----- 474

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
              A +    ++G  E A+ V + LK K    +   +   +    K  +      L+K M
Sbjct: 475 ---AFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM 531

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N  TFN+++  L KE K+E+A+SL   M K    P V  + ++I E  +  D 
Sbjct: 532 LFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDF 591

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  +F    + SG    PN VT+   I  +C+ GR+  AEE+   + + GI  +   Y
Sbjct: 592 DRA-NMFLDQMISSG--CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIY 648

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE--------------- 372
             L++ Y   G  + A  +   M   G  P+   Y+  +  L  E               
Sbjct: 649 DVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTN 708

Query: 373 -----------GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
                       D E    +   M+++   P+  TYS L KGLC+   +  AF+L N + 
Sbjct: 709 ISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMK 768

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +      +N L++  CK      A +LL SM+    +  + +Y  L+ G  + GN E
Sbjct: 769 ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQE 828

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
            A +++ ++       + V++  +++GL +   +D    L    ++ G
Sbjct: 829 KAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 1/229 (0%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           SYN L   L +   +     L   M+  G+ P++I++ T+++ +CK GN+  A   +  +
Sbjct: 157 SYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGL 216

Query: 491 KKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKI 549
            K     +   Y S+I G CK   L DA K      Q   L + ++Y  LI+G+   GKI
Sbjct: 217 MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI 276

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            EA  +F +M+  G   +   Y +L+   C+ G   +A +  + M+ +GI P+  TYT L
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +  F K    +E +E+   M+  G+      +NA+I         ED +
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAI 385


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 243/537 (45%), Gaps = 66/537 (12%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++H +N F   L++  +    ++L+KE      + +  T+ ++I  LC   KL+ A SLY
Sbjct: 89  TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS------------------ 281
             M+  G+ P V+    ++N  C+ G+LE AL+ F KM  +                   
Sbjct: 149 EEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRV 208

Query: 282 ----------GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
                       + +PN+ T+  +ING  K G+V  AE +   M        +  Y ++I
Sbjct: 209 DEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVP----TLANYTSVI 264

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G+ + G   +A  L ++M ++G   +N+ YN+ IH      +++ A  +L +M      
Sbjct: 265 GGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFV 324

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVL-EEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
           PD FTY IL  GLCR   + +A  L   +  E+    +  SYN LI+   K+  +  A Q
Sbjct: 325 PDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQ 384

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M+  G  PD++TY TLI G C  G    A    E M   +  P + +Y+S+I+GLC
Sbjct: 385 LFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLC 444

Query: 511 KDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +   LDAA ++  +    G    +  YN+LI G    G++ +A     EM   G + + V
Sbjct: 445 RAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGV 504

Query: 570 GYNILINFLCKFG--------------------------------CYQQARELMKVMILH 597
            Y  LI  LC++                                 C +QA+ +++V++  
Sbjct: 505 TYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLAT 564

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           G  P    Y T++    K  +  E  +L +DM+ +G+ PD  T +A++  +  +  A
Sbjct: 565 GNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKA 621



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 236/525 (44%), Gaps = 38/525 (7%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E+   T A + +++    + G    AY +++ +K KG+      +N  +    +L EI R
Sbjct: 251 EMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDR 310

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMII 258
            ++L +EM S  +V ++ T++++I  LC+  +L EA  L   +  +    PNVV +N +I
Sbjct: 311 AYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLI 370

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +   +   +  A +LF +M V +G    P+ VT++ +I G C  GR   A      M+  
Sbjct: 371 DGFSKAARVNDAYQLFLEM-VTAGQH--PDVVTYSTLIRGLCNAGRASEAHSYLEEMVGK 427

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            I   V  Y+++I G  R G  + A  + D MV  G  PN  VYNS I+ L   G +  A
Sbjct: 428 KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDA 487

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNG------------------------------ 408
              + +M ++   PD  TY  L  GLCR                                
Sbjct: 488 KLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIAS 547

Query: 409 --CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
             C++QA ++   VL       A+ Y  +I  LCK NNLA A+QLL  MI  G+ PD  T
Sbjct: 548 LRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGST 607

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-- 524
              L+   C+      A+   E M ++  KP++  Y++++N L K      A  +L+   
Sbjct: 608 VDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLI 667

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           S      D + Y  LI  Y    ++ EA  +  E+++     + V YN L+  L +    
Sbjct: 668 SHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNL 727

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           Q   EL++ M  +  + +  T+  L+  F +    +  + +  +M
Sbjct: 728 QMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 229/519 (44%), Gaps = 54/519 (10%)

Query: 142 CKATPAVF-DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN--FLSHLVKLNEIG 198
           C AT  +  D L RA   I   E  Y   +++K   H+   + W     ++ LVK  ++ 
Sbjct: 191 CAATWTILIDGLFRA---IRVDEACY-YFEEMK---HTAIPNNWTYTVVINGLVKAGKVA 243

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
              ++ +EM     V  +  +  VI   CK   + +A  L   M + G   + + +N +I
Sbjct: 244 EAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLI 299

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +  C++ +++ A +L  +M     +  +P+  T++ +I G C+  R+  A ++    ++ 
Sbjct: 300 HGHCRLQEIDRAYELLEEM---KSNDFVPDIFTYDILIAGLCRAKRLSEARDL-LGTLRN 355

Query: 319 GIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             DC  NV +Y TLIDG+++     +A +L  EMV  G  P+ V Y++ I  L   G   
Sbjct: 356 EDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRAS 415

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A   L +M+ K I P    YS +  GLCR G +  A  + + ++      +   YN LI
Sbjct: 416 EAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLI 475

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY--------- 487
             LCK+  L  AK  +  M  RG  PD +TYGTLI G C+    + A  +Y         
Sbjct: 476 YGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIE 535

Query: 488 ----------------ENMKKVEK-------KPNLVIYNSIINGLCKDASLDAAKSLLQA 524
                           E  ++V +        P    Y ++I  LCK+ +L  A+ LL+ 
Sbjct: 536 ISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLED 595

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G+  D  T + L+       K   A A   EM  +G   +   Y+ L+N L K G 
Sbjct: 596 MIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGK 655

Query: 584 YQQARELMKVMILH-GIIPDYVTYTTLVTRFSKNCSPEE 621
             +A  +++ +I H    PD + Y  L+  +S     EE
Sbjct: 656 PSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEE 694



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 168/377 (44%), Gaps = 8/377 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ +++    + G  + A  V   +   G   ++  +N+ +  L K   +       KEM
Sbjct: 435 VYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEM 494

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  T+  +I  LC+  + +EA  LY R L+ GI  +    N++I     +  L
Sbjct: 495 TERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVI---ASLRCL 551

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A ++ R + + +G+S  P +  +  +I   CK   +  A ++   MI AGI  +  T 
Sbjct: 552 EQAQRVLRVV-LATGNS--PTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTV 608

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+    R   +  A+   +EMV+ G  P+   Y++ ++ LF  G    A  VL  +I 
Sbjct: 609 DALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLIS 668

Query: 388 KHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              C PD   Y  L         V++A  +  ++  +  +    +YN L+  L ++ NL 
Sbjct: 669 HTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQ 728

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              +LL  M     + +  T+  LI G+C+ G  + AV+V   MKKV   P+  I   ++
Sbjct: 729 MVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSAAIIKFLV 787

Query: 507 NGLCKDASLDAAKSLLQ 523
           + L +      +K L++
Sbjct: 788 DELARAEREQESKDLVK 804



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 175/450 (38%), Gaps = 72/450 (16%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            +D L+    +      A D++  L+ +   + ++ ++N  +    K   +   ++L+ E
Sbjct: 329 TYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLE 388

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV+ G   +V T++ +I  LC   +  EA S    M+   I P V  ++ +I+  C+ G+
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGE 448

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A  +F  M     +   PN   +N +I G CK GR+  A+     M + G   +  T
Sbjct: 449 LDAASTVFDSM---VANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVT 505

Query: 327 YATLIDGYARGGSSEEALRL------------------------CDEMVKR--------G 354
           Y TLI G  R   ++EA  L                        C E  +R        G
Sbjct: 506 YGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATG 565

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P    Y + I  L  E ++  A  +L DMI   I PD  T   L   +CR      A 
Sbjct: 566 NSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAM 625

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR-----------GLIP- 462
               +++         +Y+ L+N L K+   + A  +L  +I             GLI  
Sbjct: 626 AFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAA 685

Query: 463 ------------------------DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
                                    I+ Y TL+ G  +  N++   ++   MK+ E   N
Sbjct: 686 YSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVN 745

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRI 528
              +N +I G C+    D A  +L   +++
Sbjct: 746 EATFNILIQGFCRLGQTDRAVRVLSEMKKV 775



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 1/145 (0%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+  L  A   S    +   L S+  C      +  L+ A +     E A +V+Q+LK K
Sbjct: 646 LLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSK 705

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
               SI A+N  L  L +   +   ++L +EM    +V N  TFN++I   C+  + + A
Sbjct: 706 WGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRA 765

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINE 260
           + +   M K  + P+      +++E
Sbjct: 766 VRVLSEM-KKVLTPSAAIIKFLVDE 789


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 227/447 (50%), Gaps = 4/447 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L+    + G    A+ + Q+    G ++ IH +   +  L K  +I     L +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G    + T+N ++  LCK  +LEEA+ L  +++ +G  P+VV +  +I+   +    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KLF++M   +   +  ++V +  +I G  + G++  A  +   M   G   +V T 
Sbjct: 121 FEAYKLFKEM---ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 177

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +T+IDG  + G    A+R+   M  RGL PN VVY++ IH L     ++ AL +L+ M  
Sbjct: 178 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 237

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  TY+IL  GLC++G V  A    +++LE     D Y+YNILI+  CK+ N  A
Sbjct: 238 AFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDA 297

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M      P+++TYGTLI G CK   +  A   Y++MK+    P+  +Y+S+++
Sbjct: 298 ACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVD 357

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           GLCK   L+    L    +R G+ ++ T   LI       ++ EA ++F+ +R  G+  +
Sbjct: 358 GLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-H 416

Query: 568 KVGYNILINFLCKFGCYQQARELMKVM 594
              YN +I+ L K G   + + + + M
Sbjct: 417 PYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 179/359 (49%), Gaps = 1/359 (0%)

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T + +ING  K G +  A  +       G   ++ TY T++D  A+    +EA+ L +++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
              G  P    YN+ ++ L   G +E A+ +L  ++D    PD  TY+ L  GL +    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A+KL  ++    +  D   Y  LI  L ++  +  A  +  +M  +G +PD++T  T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIG 529
           IDG CK G I  AV+++++M+     PN V+Y+++I+GLCK   +D A  +L Q  +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D ITYN LI+G   +G +A A A F EM   G   +   YNILI+  CK G    A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +   M      P+ VTY TL++   K     +    +  M   G  PD+  Y++++  L
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 198/424 (46%), Gaps = 22/424 (5%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           IV  L   ++  +A+ LM  + +AN  +P                T A ++AL+    ++
Sbjct: 40  IVDWLAKNKKIQEAVALMEKI-TANGCTP----------------TIATYNALLNGLCKM 82

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E A D+++K+   G +  +  + + +  L K       +KL+KEM S G   +   +
Sbjct: 83  GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCY 142

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I  L +  K+ +A S+Y  M   G  P+VV  + +I+  C+ G +  A+++F+    
Sbjct: 143 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKS--- 199

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    + PN V ++ +I+G CK  +++ A E+   M KA    +  TY  LIDG  + G 
Sbjct: 200 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 259

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
              A    DEM++ G  P+   YN  I      G+ + A  V  DM      P+  TY  
Sbjct: 260 VAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGT 319

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC+   + +A   +  + E     D++ Y+ L++ LCKS  L     L   M  R 
Sbjct: 320 LISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM-ERS 378

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            + +  T   LI   CK   ++ AV ++  ++K E  P+   YNSII+ L K   ++  +
Sbjct: 379 GVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK-EGMPHPYAYNSIISALIKSGKVNEGQ 437

Query: 520 SLLQ 523
           ++ Q
Sbjct: 438 AVYQ 441



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           ++ +INGL K   L  A SL Q +   G  +D  TY T+++    N KI EA A+  ++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G       YN L+N LCK G  ++A +L++ ++ +G  PD VTYT+L+    K     
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           E  +L  +M   G++ D   Y A+I  LL
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLL 150


>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
 gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
          Length = 578

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 260/519 (50%), Gaps = 9/519 (1%)

Query: 53  QMAPSLTNSLVNRVV---SEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
           +++ SLT+  +++++   S +   P L+  F+ WV     + HSL+SS A++ +L   + 
Sbjct: 24  KISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVELIPDYKHSLQSSWAMIFILTEHKH 83

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F  A  L+  +   + +S    L  L+ SY+       +   L+         + A  V+
Sbjct: 84  FKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAHILSWLMIIYVNCKMPQDAIQVL 143

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           + +++ G   ++HA    L+ L K       WK YK+M+  G V N++ +N++I+A CK 
Sbjct: 144 EYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKS 203

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
             +E+A  L   M    ++P++  +N +I+   +      AL +  +M       V P+ 
Sbjct: 204 GDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRM---ERAGVSPDI 260

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT+N +I GFCK G++  A ++ +  IK  +  N  TY TLIDGY R    EEALRLC  
Sbjct: 261 VTYNSLIYGFCKEGKMREAVKL-FREIK-DVSPNHVTYTTLIDGYCRVNDFEEALRLCKV 318

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M  +GL      YNS +  L  EG +  A  +L++M ++ + PD+ T + L    C+ G 
Sbjct: 319 MEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGD 378

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +K A K+ +++L+  +  D+++Y  LI+  C   ++ +AK+LL  M+  GL P   TY  
Sbjct: 379 MKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCTYSW 438

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+DGYC+ GN    + + +         +L +  ++I  LC    +  A+ +       G
Sbjct: 439 LVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQERVGFAEKIYSTMHLRG 498

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +  D++ Y +L   Y+ +GK      M SEM    + +N
Sbjct: 499 VSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLIN 537



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 164/331 (49%), Gaps = 3/331 (0%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   N+     L++  A+   ++   +   +M++ G++PN  +YN  IH     GDVE A
Sbjct: 150 GFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSGDVEKA 209

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             ++ +M  K + PD +TY+ L     R     +A  + +++    +  D  +YN LI  
Sbjct: 210 EQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYG 269

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            CK   +  A +L     ++ + P+ +TY TLIDGYC+  + E A+++ + M+       
Sbjct: 270 FCKEGKMREAVKLFRE--IKDVSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLG 327

Query: 499 LVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           +  YNS++  LC++  + DA K L +  +R    D +T NTLIN Y   G +  A  + S
Sbjct: 328 VATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKS 387

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           +M + G+ ++   Y  LI+  C     + A+EL+  M+  G+ P Y TY+ LV  + +  
Sbjct: 388 KMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCTYSWLVDGYCELG 447

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +   +I L D+ +  G   D     A+I  L
Sbjct: 448 NEGAIISLLDEFLTKGYCVDLSVCRALIRRL 478



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 3/210 (1%)

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A Q+L  M + G  P++     L++   K    +   + Y+ M +V   PN+ IYN +I+
Sbjct: 139 AIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIH 198

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             CK   ++ A+ L+ +   +    D  TYNTLI+ Y       EA  +   M   G++ 
Sbjct: 199 ACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGVSP 258

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V YN LI   CK G  ++A +L +   +  + P++VTYTTL+  + +    EE + L 
Sbjct: 259 DIVTYNSLIYGFCKEGKMREAVKLFRE--IKDVSPNHVTYTTLIDGYCRVNDFEEALRLC 316

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             M   G+     TYN+++  L  E    D
Sbjct: 317 KVMEAKGLHLGVATYNSVLRKLCEEGRIRD 346



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 1/104 (0%)

Query: 544 FINGKIAE-AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           ++N K+ + A  +   MR  G   N     +L+N L K        +  K MI  G++P+
Sbjct: 130 YVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPN 189

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              Y  L+    K+   E+  +L  +M L  V PD  TYN +IS
Sbjct: 190 IHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLIS 233


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 228/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAT 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 RYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLI G+ + G  + A+ +   M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD FTY+ L  G C+ G +  AFK   ++++ ++  D  +Y  
Sbjct: 298 LKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PDI TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 158/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GLIP+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLI G+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M  +G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMN 430



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 158/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++  +L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 266 AMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            I TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMN 430



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI G+  NG++  A  ++  M +  +  + + YN LI  LCK G  +QA  
Sbjct: 244 IPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHX 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   +    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+ +A  +F EM   G+  N V +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI   CK G    A E+ K M+   ++PD +TY TL+    K    ++   L D+M +
Sbjct: 251 TTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSM 310

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 311 KGLKPDKFTYTTLI 324


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 242/506 (47%), Gaps = 26/506 (5%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A+ + F ALV A +  G    A     ++       +   +N  L  LV    I     L
Sbjct: 135 ASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y  MV+ G   N  T+N+++  LCK+    +AL ++  ML  GI PNV  + ++++  C 
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ A++L   +G M     LP+ VT+N  ++G CK+GRV  A +    +   G    
Sbjct: 255 AGKIDEAVQL---LGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           ++ Y+ LIDG  +    +E       M++R + P+ V+Y   I      G +E AL  L 
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  K   PD F Y+ + K LC +G +++A  L +++L+ ++V D+ +  I+I  LCK  
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A Q+   M   G  P ++TY  LIDG+ + G +E A  ++  M+ +   P+L +  
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFLRL 490

Query: 504 SI-INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++  N +C   SL                       L++    +G++ +A+ +   + + 
Sbjct: 491 TLGANQVCDSESL---------------------RKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  + V YN LIN LCK      A  L K + L GI PD +TY TL+    +     + 
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
           + L  +++ SG SP    YN+++  L
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 212/475 (44%), Gaps = 62/475 (13%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++A +    ++G    A+  +  L+  G ++ +  ++  +  L +       +
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             YK M+      +V  + ++I    +  ++E+ALS    M K G  P+  C+N ++   
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  GDLE A  L  +M  +  + VL +S T   +I G CK G V+ A +I   M + G D
Sbjct: 393 CDHGDLERAHTLRSEM--LQNNLVL-DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             V TY  LIDG+ R G  EEA  L  +M     M NN                  +LF+
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKME----MGNN-----------------PSLFL 488

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              +    +C D  +   L   +C++G V +A+KL   +++  +V D  +YN LIN LCK
Sbjct: 489 RLTLGANQVC-DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + NL  A +L   + ++G+ PD ITYGTLIDG  +      A+ +++N+ +    P+L I
Sbjct: 548 ARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSI 607

Query: 502 YNSIINGLCK------------------------------------DASL-DAAKSLLQA 524
           YNS++  LC+                                    D SL D  + L++ 
Sbjct: 608 YNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKI 667

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            Q  G + +  Y   + G     +  +A  +F  ++  GI +      +LIN+LC
Sbjct: 668 DQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 224/470 (47%), Gaps = 53/470 (11%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           +D ++  + T  V++ +++A    G    A  +  ++   G + +   +N  +  L K  
Sbjct: 163 MDEFQ-SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQG 221

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
             G   K++ EM+  G + NV  + +++ +LC   K++EA+ L   M   G  P+ V +N
Sbjct: 222 MAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYN 281

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
             ++  C+VG +  A   F+++ ++           ++C+I+G  +  R +        M
Sbjct: 282 AFLSGLCKVGRVNEA---FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++  I  +V  Y  +I G A  G  E+AL   D M K+G +P+   YN+ +  L   GD+
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--------------- 420
           E A  + S+M+  ++  D  T +I+  GLC+ G V +A ++ +++               
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNAL 458

Query: 421 ---------LEE------------------------HMVGDAYSYNILINYLCKSNNLAA 447
                    LEE                        + V D+ S   L++ +C+S  +  
Sbjct: 459 IDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLK 518

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL S+I  G++PD++TY TLI+G CK  N++GAV++++ ++     P+ + Y ++I+
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMF 556
           GL +    + A  L Q   + G   +++ YN+++       K+++A  ++
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 162/343 (47%), Gaps = 7/343 (2%)

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           AG+  +   +A L+  ++  G + +A++    M +    P   VYN+ +  L   G +  
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILL 190

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL + + M+     P+  TY++L  GLC+ G    A K+ +++L+  ++ +   Y +L++
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC +  +  A QLL SM  +G +PD +TY   + G CK G +  A Q    ++      
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL 310

Query: 498 NLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
            L  Y+ +I+GL +    D      K++L   +R    D + Y  +I G    G+I +A 
Sbjct: 311 GLKGYSCLIDGLFQARRFDEGFGYYKTML---ERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
           +    M+  G   +   YN ++  LC  G  ++A  L   M+ + ++ D  T T ++   
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            K    +E +++ D+M   G  P   TYNA+I     E   E+
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEE 470



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/457 (21%), Positives = 172/457 (37%), Gaps = 98/457 (21%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           ++  F+  L+    ++  L   RRFD+       ++  N +SP                 
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN-ISP----------------D 346

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             ++  ++R C + G  E A   +  +K KG       +N  L  L    ++ R   L  
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM+    V +  T  ++I  LCK   ++EA+ ++  M + G  P V+ +N +I+   + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 266 DLEFALKLFRKMGVMSGDS----------------------------------------- 284
            LE A  LF KM + +  S                                         
Sbjct: 467 RLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSI 526

Query: 285 ----VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
               V+P+ VT+N +ING CK   ++ A  +   +   GI  +  TY TLIDG  R    
Sbjct: 527 IDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRE 586

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIH--------------WL----------------- 369
            +A+ L   +++ G  P+  +YNS +               WL                 
Sbjct: 587 NDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLA 646

Query: 370 -----FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
                  +G ++  +  L  +  ++       Y+I   GLC+      A ++ + + E  
Sbjct: 647 NAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFG 706

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           +        +LINYLC   NL AA  ++   + + +I
Sbjct: 707 IDITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 58/294 (19%), Positives = 117/294 (39%), Gaps = 37/294 (12%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R ++A +L   +   N+  P  FL   L + ++C +       LV    Q G    AY +
Sbjct: 467 RLEEARMLFHKMEMGNN--PSLFLRLTLGANQVCDSES--LRKLVHDMCQSGQVLKAYKL 522

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           ++ +   G    +  +N  ++ L K   +    +L+KE+   G   +  T+  +I  L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF-----RKMGVMSGD 283
             +  +A+ L+  +L+SG  P++  +N ++   C++  L  A+ L+     +K       
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVES 642

Query: 284 SVLPN----------------------------SVTHNCIINGFCKLGRVEFAEEIRYAM 315
            VL N                            S  +   + G C++ R + A  I + +
Sbjct: 643 EVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTL 702

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            + GID      A LI+      +   A+ +    + + ++ +  V N  + WL
Sbjct: 703 QEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWL 756



 Score = 45.4 bits (106), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 7/137 (5%)

Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           DA  DA  + L AS          +  L+  +   G+ A+A   FS M           Y
Sbjct: 123 DALADARAAGLPASSS-------AFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVY 175

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N ++  L   G    A  L   M+  G  P+  TY  L+    K     + +++ D+M+ 
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 632 SGVSPDNQTYNAIISPL 648
            G+ P+ + Y  ++S L
Sbjct: 236 RGIMPNVKIYTVLLSSL 252


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 235/473 (49%), Gaps = 7/473 (1%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           NN L  LV+  E+   +K  + MV  G V ++     +I   C+  K  +A  +   +  
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           SG  P+V+ +N++I+  C+ G++  AL +  +M      SV P+ VT+N I+   C  G+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM------SVSPDVVTYNTILRSLCDSGK 219

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++ A E+   M++     +V TY  LI+   R     +A++L DEM  RG  P+ V YN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++ +  EG ++ A+  L+DM      P+  T++I+ + +C  G    A KL   +L + 
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
                 ++NILIN+LC+   L  A  +L  M   G  P+ ++Y  L+ G+CK   ++ A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGY 543
           +  E M      P++V YN+++  LCKD  + DA + L Q S +      ITYNT+I+G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              GK  +A  +  EMR   +  + + Y+ L+  L + G   +A +        G+ P+ 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           VT+ +++    K    +  I+    M+  G  P   +Y  +I  L  E  A++
Sbjct: 520 VTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKE 572



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 236/474 (49%), Gaps = 11/474 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
            +FLE ++    +    P     L+R   ++G T  A  +++ L+  G    +  +N  +
Sbjct: 122 FKFLENMVYHGNVPDIIPCT--TLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           S   K  EI     +   M       +V T+N ++ +LC   KL++A+ +  RML+   +
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V+ + ++I   C+   +  A+KL  +M         P+ VT+N ++NG CK GR++ A
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEM---RDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M  +G   NV T+  ++      G   +A +L  +M+++G  P+ V +N  I++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 369 LFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
           L  +G +  A+ +L  M  KH C P+  +Y+ L  G C+   + +A +   +++      
Sbjct: 354 LCRKGLLGRAIDILEKM-PKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +YN ++  LCK   +  A ++L+ +  +G  P +ITY T+IDG  K G    A+++ 
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           + M+  + KP+ + Y+S++ GL ++  +D A       +R+G+  +A+T+N+++ G    
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKT 532

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            +   A      M N G    +  Y ILI  L   G  ++A EL+  +   G++
Sbjct: 533 RQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 215/451 (47%), Gaps = 18/451 (3%)

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKV 174
           MG    A  +  LE LEG         A P V  ++ ++    + G    A  V+ ++ V
Sbjct: 150 MGKTRKAAKI--LEVLEG-------SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
              S  +  +N  L  L    ++ +  ++   M+      +V T+ ++I A C++  + +
Sbjct: 201 ---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ 257

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A+ L   M   G  P+VV +N+++N  C+ G L+ A+K    M         PN +THN 
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM---PSSGCQPNVITHNI 314

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           I+   C  GR   AE++   M++ G   +V T+  LI+   R G    A+ + ++M K G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             PN++ YN  +H    E  ++ A+  L  M+ +   PD  TY+ +   LC++G V+ A 
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           ++ NQ+  +       +YN +I+ L K+     A +LL  M  + L PD ITY +L+ G 
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
            + G ++ A++ +   +++  +PN V +NSI+ GLCK    D A   L      G     
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTE 554

Query: 535 T-YNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           T Y  LI G    G   EA  + +E+ N G+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 202/402 (50%), Gaps = 7/402 (1%)

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           + +  + G+LE   K    M V  G+  +P+ +    +I GFC++G+   A +I   +  
Sbjct: 109 LRQLVRTGELEEGFKFLENM-VYHGN--VPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           +G   +V TY  +I GY + G    AL + D M    + P+ V YN+ +  L   G ++ 
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A+ VL  M+ +   PD  TY+IL +  CR+  V QA KL +++ +     D  +YN+L+N
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            +CK   L  A + L+ M   G  P++IT+  ++   C  G    A ++  +M +    P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           ++V +N +IN LC+   L  A  +L+   + G   ++++YN L++G+    K+  A    
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             M + G   + V YN ++  LCK G  + A E++  +   G  P  +TY T++   +K 
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
               + I+L D+M    + PD  TY++++  L  E   ++ +
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 225/423 (53%), Gaps = 4/423 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   + F +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +     +     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++G
Sbjct: 126 DILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A+++L  M+  GL PDI TY  +I+ +CK G++    ++ + M++    P++V YN +
Sbjct: 363 VDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVL 422

Query: 506 ING 508
           +NG
Sbjct: 423 MNG 425



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 153/286 (53%), Gaps = 1/286 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R G + + F+L + +L
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A  L+      GL  D  TY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           PD  TYT ++  F K     +  +L  +M  +G +P   TYN +++
Sbjct: 379 PDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 424



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 140 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            I TY  +IN +   G + +   +  EM+  G A + V YN+L+N
Sbjct: 380 DIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 424



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  +  +LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 118 KLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA +
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C++G ++ A  + + + +  +     SYN L+N   +  +L    +L S+
Sbjct: 137 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K  Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G    A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ PD  TY  II+
Sbjct: 376 GLKPDIGTYTMIIN 389


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 271/575 (47%), Gaps = 25/575 (4%)

Query: 104 LVNWRRFDDALLLM-------GNLMSANSVSPLEFLEGLLDSYEICKATPAV-------- 148
           L N +R ++AL L+       G   + N V+    ++GL  +  + +A   +        
Sbjct: 171 LCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 230

Query: 149 ------FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
                 +  ++    +  A + A  V+Q +  KG    +  +N  +  L K   + R   
Sbjct: 231 KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + + M+  G   +V T+N +I  LCK   ++ A  +   M+   + P++  +N +I+   
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G+ +   ++ R++  M    + P+ VT++ +++  CK G+   A +I Y MI+ GI  
Sbjct: 351 STGEWK---EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP 407

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV  Y  L+ GYA  G+  +   L D MV  G+ PNN ++N  +     +  ++ A+ + 
Sbjct: 408 NVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIF 467

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           S M    + PD  TY IL   LC+ G V  A    NQ++ + +  ++  +N L+  LC  
Sbjct: 468 SRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTV 527

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           +    A++L   M  +G+ P+++ + T++   C  G +  A ++ ++M++V  +PN++ Y
Sbjct: 528 DRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISY 587

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++I G C     D A  LL     +GL  D I+Y+TL+ GY   G+I  A+ +F EM  
Sbjct: 588 NTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLR 647

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+    V Y+ ++  L     + +A+EL   MI  G   D  TY  ++    K    +E
Sbjct: 648 KGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDE 707

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             ++   +    + P+  T+  +I  L      +D
Sbjct: 708 AFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKD 742



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 255/550 (46%), Gaps = 25/550 (4%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLD--SYEICKATP----AVFDALVRACTQIGATE 163
            DDAL L   L+     + +     LL+  +   C +T     ++F+ + RAC+      
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSN----- 84

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
                    KV+     +  ++       +L  I   +  +  ++  G+  N    N ++
Sbjct: 85  ---------KVRP---DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLL 132

Query: 224 YALCKECKLEEALS-LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
             LC   +++EA+  L  RM + G  PNVV  N ++   C    +E AL+L   M    G
Sbjct: 133 NGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGG 192

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
            +  PN VT+N II+G CK   V+ AE +   MI  G+  +V TY+T+IDG  +  + + 
Sbjct: 193 GNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDR 252

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A  +   M+ +G+ P+ V YN+ I  L     V+ A  VL  MIDK + PD  TY+ +  
Sbjct: 253 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 312

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLC+   V +A  +   ++++ +  D  +YN LI+    +       + L  M  RGL P
Sbjct: 313 GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D++TY  L+D  CK G    A +++  M +   KPN+ IY  +++G     ++     LL
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                 G+  +   +N ++  Y     I EA  +FS M   G++ + V Y ILI+ LCK 
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKL 492

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G    A      MI  G+ P+ V + +LV         E+  EL  +M   GV P+   +
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552

Query: 642 NAIISPLLGE 651
           N I+  L  E
Sbjct: 553 NTIMCNLCNE 562



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 225/470 (47%), Gaps = 43/470 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQV---GDLEFALKLFRKMGVMSGDSVLPN 288
           +++AL L+  +L      +V  FN ++N   +       E A+ LF +M     + V P+
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR-LC 347
             T++ +   FC+LGR+E        ++K G   N      L++G       +EA+  L 
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK---HICPDHFTYSILTKGL 404
             M + G MPN V  N+ +  L  E  VE AL +L  M +    +  P+  TY+ +  GL
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   V +A  +   ++++ +  D  +Y+ +I+ LCK+  +  A+ +L  MI +G+ PD+
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY T+IDG CK   ++ A  V ++M     KP++V YN+II+GLCK  ++D A  +LQ 
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 525 S-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
              +    D  TYN LI+GY   G+  E      EM   G+  + V Y++L+++LCK G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP------- 636
             +AR++   MI  GI P+   Y  L+  ++   +  ++ +L D MV +G+SP       
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 637 ----------------------------DNQTYNAIISPLLGEKSAEDQV 658
                                       D  TY  +I  L      +D V
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 221/449 (49%), Gaps = 4/449 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    ++  L+      GA     D++  +   G S + + +N  L    K   I     
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++  M   G   +V T+ ++I ALCK  ++++A+  + +M+  G+ PN V FN ++   C
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            V   E A +LF +M       V PN V  N I+   C  G+V  A+ +  +M + G+  
Sbjct: 526 TVDRWEKAEELFFEMW---DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP 582

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV +Y TLI G+   G ++EA +L D MV  GL P+ + Y++ +      G ++ A  + 
Sbjct: 583 NVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLF 642

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ K + P   TYS + +GL       +A +L+  +++     D Y+YNI++N LCK+
Sbjct: 643 REMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKT 702

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           N +  A ++  S+  + L P+IIT+  +ID   KGG  + A+ ++ ++      PN+V Y
Sbjct: 703 NCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             ++  + ++  LD   +L  A ++ G   D++  N +I      G+I  A A  S++  
Sbjct: 763 CIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDE 822

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQAREL 590
           +  ++     ++LI+   +      A+ L
Sbjct: 823 MNFSLEASTTSLLISLFSREEYKNHAKSL 851


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/626 (25%), Positives = 301/626 (48%), Gaps = 63/626 (10%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
           +S  L++ F+  + +   F HS  S+  + H+L   RRF +  +++  L+          
Sbjct: 96  ESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGT----L 151

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
            E L +S+   ++T  V+D L+   +++   + +  +++K+K +  +VS  ++N+ L H 
Sbjct: 152 CELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYH- 210

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL--------------- 236
               E  + W +YKE+      +N +T++ V+  LC++ KLE+A+               
Sbjct: 211 --FRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 264

Query: 237 --------------------SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
                               S +  +LK G+ P+V   N++IN  C VG +  AL+L   
Sbjct: 265 VSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 324

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
              M+   V P+SVT+N +  GF  LG +  A E+   M+  G+  +V TY  L+ G  +
Sbjct: 325 ---MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 381

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNST-IHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
            G+ +  L L  +M+ RG   N+++  S  +  L   G ++ AL + + M    + PD  
Sbjct: 382 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            YSI+  GLC+ G    A  L++++ ++ ++ ++ ++  L+  LC+   L  A+ LL S+
Sbjct: 442 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           I  G   DI+ Y  +IDGY K G IE A+++++ + +    P++  +NS+I G CK  ++
Sbjct: 502 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 561

Query: 516 DAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
             A+ +L   +  GL  + ++Y TL++ Y   G       +  EM+  GI    V Y+++
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621

Query: 575 INFLCKF----GC--------YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
              LC+      C        +++ ++ ++ M   GI PD +TY T++    +       
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
               + M    +   + TYN +I  L
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSL 707



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 225/470 (47%), Gaps = 17/470 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             ++ L +    +G   GA++VI+ +  KG S  +  +   L    +L  I     L K+
Sbjct: 335 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 394

Query: 207 MVSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           M+S G+ + ++   ++++  LCK  +++EALSL+ +M   G+ P++V ++++I+  C++G
Sbjct: 395 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 454

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
             + AL L+ +M       +LPNS TH  ++ G C+ G +  A  +  ++I +G   ++ 
Sbjct: 455 KFDMALWLYDEM---CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 511

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  +IDGYA+ G  EEAL L   +++ G+ P+   +NS I+      ++  A  +L  +
Sbjct: 512 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 571

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK---- 441
               + P   +Y+ L       G  K   +L  ++  E +     +Y+++   LC+    
Sbjct: 572 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 631

Query: 442 --------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
                          KQ L  M   G+ PD ITY T+I   C+  ++ GA    E MK  
Sbjct: 632 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 691

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
               +   YN +I+ LC    +  A S + + Q   + L    Y TLI  + + G    A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
             +F ++ + G  V+   Y+ +IN LC+     +++    +M+  GI PD
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 144/603 (23%), Positives = 279/603 (46%), Gaps = 48/603 (7%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
           N V+  FR++ K+  + Y  + + N  ++S      +V  L   ++ +DA+L        
Sbjct: 205 NSVLYHFRETDKM-WDVYKEIKDKNEHTYS-----TVVDGLCRQQKLEDAVLF------- 251

Query: 124 NSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
                       L + E     P+V  F++++    ++G  + A      +   G   S+
Sbjct: 252 ------------LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 299

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           ++ N  ++ L  +  I    +L  +M   G   +  T+N++         +  A  +   
Sbjct: 300 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 359

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG---DSVLPNSVTHNCIING 298
           ML  G+ P+V+ + +++   CQ+G+++  L L + M +  G   +S++P SV    +++G
Sbjct: 360 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSG 414

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK GR++ A  +   M   G+  ++  Y+ +I G  + G  + AL L DEM  + ++PN
Sbjct: 415 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 474

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           +  + + +  L  +G +  A  +L  +I      D   Y+I+  G  ++GC+++A +L  
Sbjct: 475 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 534

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            V+E  +     ++N LI   CK+ N+A A+++L  + + GL P +++Y TL+D Y   G
Sbjct: 535 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 594

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLC------------KDASLDAAKSLLQASQ 526
           N +   ++   MK     P  V Y+ I  GLC            ++   +  K  L+  +
Sbjct: 595 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 654

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D ITYNT+I        ++ AF     M++  +  +   YNILI+ LC +G  +
Sbjct: 655 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 714

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A   +  +    +      YTTL+        PE  ++L   ++  G +   + Y+A+I
Sbjct: 715 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 774

Query: 646 SPL 648
           + L
Sbjct: 775 NRL 777



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 174/435 (40%), Gaps = 88/435 (20%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLD-SYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
            +LL G     N    L  L+ +L   +E+    P     ++    + G  + A  +  +
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC--SVMLSGLCKTGRIDEALSLFNQ 430

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +K  G S  + A++  +  L KL +      LY EM     + N  T   ++  LC++  
Sbjct: 431 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 490

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L EA SL   ++ SG   ++V +N++I+   + G +E AL+LF+   V+    + P+  T
Sbjct: 491 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK---VVIETGITPSVAT 547

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE--EALR---- 345
            N +I G+CK   +  A +I   +   G+  +V +Y TL+D YA  G+++  + LR    
Sbjct: 548 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 607

Query: 346 -----------------LCD------------------------EMVKRGLMPNNVVYNS 364
                            LC                         +M   G+ P+ + YN+
Sbjct: 608 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 667

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG---------------- 408
            I +L     + GA   L  M  +++     TY+IL   LC  G                
Sbjct: 668 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 727

Query: 409 ---------------CVK----QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
                          CVK     A KL +Q+L          Y+ +IN LC+ + +  +K
Sbjct: 728 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESK 787

Query: 450 QLLSSMIVRGLIPDI 464
                M+ +G+ PD+
Sbjct: 788 FFFCLMLSQGISPDL 802


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 225/429 (52%), Gaps = 4/429 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F  ++ +L K    + A+SL+  M  +GI  ++V FN++IN   Q+G   F+  +F  + 
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANI- 117

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +  G    PN++T   +I G C  G++  A      ++  G   N   Y TLI+G  + G
Sbjct: 118 LKKGYE--PNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  AL+L   +  + + PN V+YN+ I  +     V  A  + S+M+ K I PD  TYS
Sbjct: 176 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +  A  L N+++ E +  D Y+++IL++  CK   +  AK +L+ M+ +
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD++TY +L+DGYC    +  A  ++  M +     N+  YN +ING CK   +D A
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +L +      ++ D +TYN+LI+G   +GKI+ A  +  EM + G+  +K+ YN +++ 
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDA 415

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L+  M   GI PD  TYT L+    K    ++   + +D+++ G +  
Sbjct: 416 LCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNIT 475

Query: 638 NQTYNAIIS 646
             TY  +I 
Sbjct: 476 VYTYTVMIQ 484



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 246/493 (49%), Gaps = 6/493 (1%)

Query: 145 TPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +F+   ++ +  +I   + A  + ++++  G +  +  +N  ++   +L      + 
Sbjct: 53  TPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS 112

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++  ++  GY  N  T   +I  LC + ++ +AL  + +++  G   N VC+  +IN  C
Sbjct: 113 VFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLC 172

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +VG    AL+L R+   + G  V PN V +N II+  CK+  V  A ++   M+  GI  
Sbjct: 173 KVGQTSAALQLLRR---VDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 229

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY+ LI G+   G   +A+ L ++M+   + P+   ++  +     EG V+ A  VL
Sbjct: 230 DVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL 289

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           + M+ + I PD  TY  L  G C    V +A  + N + +  +  +  SYNI+IN  CK 
Sbjct: 290 AMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKI 349

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  L   M  + +IPD++TY +LIDG CK G I  A+++ + M       + + Y
Sbjct: 350 KKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITY 409

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NSI++ LCK+  +D A +LL   +  G+  D  TY  LI+G    G++ +A  +F ++  
Sbjct: 410 NSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLV 469

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G  +    Y ++I   C    + +A  L+  M  +G IP+  TY  ++    +    + 
Sbjct: 470 KGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDM 529

Query: 622 VIELHDDMVLSGV 634
             +L  +M+  G+
Sbjct: 530 AEKLLREMIARGL 542



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 250/506 (49%), Gaps = 8/506 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+   +Q+G T  ++ V   +  KG+  +       +  L    +I +    + ++
Sbjct: 93  TFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKV 152

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G+  N   +  +I  LCK  +   AL L  R+    + PNVV +N II+  C+V  +
Sbjct: 153 VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 212

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L+ +M V  G S  P+ VT++ +I+GFC LG++  A  +   MI   I+ +V T+
Sbjct: 213 NEAFDLYSEM-VSKGIS--PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTF 269

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + L+DG+ + G  +EA  +   M+K+G+ P+ V Y S +        V  A  + + M  
Sbjct: 270 SILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  +  +Y+I+  G C+   V +A  L  ++  ++++ D  +YN LI+ LCKS  ++ 
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY 389

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L+  M  RG+  D ITY +++D  CK   ++ A+ +   MK    +P++  Y  +I+
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK   L  A+++ +     G  +   TY  +I G+  N    +A A+ S+M + G   
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIP 509

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS----PEEV 622
           N   Y I+I  L +      A +L++ MI  G++  +     L TRF +  S    P EV
Sbjct: 510 NAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGWKKAYCLFTRFFQRRSNLYPPLEV 569

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
              H  + L  V    ++ + ++  L
Sbjct: 570 RSGHGSIDLGKVEHGPESKSELLKGL 595



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 205/414 (49%), Gaps = 4/414 (0%)

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           +S + R+L     P +  F  I+    ++   + A+ L R+M     + +  + VT N +
Sbjct: 41  VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEF---NGIASDLVTFNIL 97

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           IN F +LG   F+  +   ++K G + N  T  TLI G    G   +AL   D++V  G 
Sbjct: 98  INCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGF 157

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             N V Y + I+ L   G    AL +L  +  K + P+   Y+ +   +C+   V +AF 
Sbjct: 158 HLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L+++++ + +  D  +Y+ LI+  C    L  A  L + MI   + PD+ T+  L+DG+C
Sbjct: 218 LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI- 534
           K G ++ A  V   M K   KP++V Y S+++G C    ++ AKS+     + G+   + 
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQ 337

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +YN +ING+    K+ EA  +F EM    I  + V YN LI+ LCK G    A +L+  M
Sbjct: 338 SYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM 397

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              G+  D +TY +++    KN   ++ I L   M   G+ PD  TY  +I  L
Sbjct: 398 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 257/509 (50%), Gaps = 9/509 (1%)

Query: 55  APSLTNSLVNRVV---SEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD 111
           A +LT+S +++V+   S +      +  F+ W+     +SHSL+ S A++H+L   + F 
Sbjct: 32  ASALTSSTIHKVLLQLSLYGYGLSHSFPFFKWLDSIPHYSHSLQCSWAMIHILTEHKHFK 91

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
            A  ++  +   + +S    L  L+ +++  +    V   LV    +   T+ A  V ++
Sbjct: 92  TAQHVLEKIAHKDFLSSPSVLSTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQ 151

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +++      +HA    L+ L+K       WK+YK MV  G V N+  +N + +A  K   
Sbjct: 152 MRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCLFHACSKSGD 211

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +E A  L   M   G+  ++  +N +++  C+ G    AL +  +M     + +  + V+
Sbjct: 212 VERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRM---EREGINLDIVS 268

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I GFCK GR+  A  + ++ IK     +V TY TLIDGY +    EEAL++C  M 
Sbjct: 269 YNSLIYGFCKEGRMREAMRM-FSEIKNATPNHV-TYTTLIDGYCKTNELEEALKMCKLME 326

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +GL P  V YNS +  L  +G +  A  +L++M ++ +  D+ T + L    C+ G +K
Sbjct: 327 AKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLK 386

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A K  N++LE  +  D ++Y  LI+  CK+N L +AK+L+ SM+  G  P   TY  ++
Sbjct: 387 SALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIV 446

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           DGY K  N++  + + +         ++ +Y ++I   CK   +  A+ L    +  G+ 
Sbjct: 447 DGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGIS 506

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEM 559
            +++ Y ++   Y+  G ++ A +M  EM
Sbjct: 507 GESVIYTSIAYAYWNVGNVSAASSMLEEM 535



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 176/343 (51%), Gaps = 9/343 (2%)

Query: 305 VEFAEEIRYAMIKAGID-CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           ++  E++R   +K  +  C V     L++   + G +    ++   MV+ G++PN  +YN
Sbjct: 146 IQVFEQMRLHEVKPHLHACTV-----LLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYN 200

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
              H     GDVE A  +L++M  K +  D FTY+ L    C+ G   +A  + N++  E
Sbjct: 201 CLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMERE 260

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D  SYN LI   CK   +  A ++ S   ++   P+ +TY TLIDGYCK   +E A
Sbjct: 261 GINLDIVSYNSLIYGFCKEGRMREAMRMFSE--IKNATPNHVTYTTLIDGYCKTNELEEA 318

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLING 542
           +++ + M+     P +V YNSI+  LC+D  + DA K L + S+R    D IT NTLIN 
Sbjct: 319 LKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINA 378

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y   G +  A    ++M   G+  +   Y  LI+  CK    + A+ELM  M+  G  P 
Sbjct: 379 YCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPS 438

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           Y TY+ +V  ++K  + + V+ L D+ +  G+  D   Y A+I
Sbjct: 439 YCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALI 481



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 198/396 (50%), Gaps = 6/396 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N    + ++    K    ++A+ ++ +M    + P++    +++N   + G      K++
Sbjct: 125 NSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIY 184

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           ++M V  G  V+PN   +NC+ +   K G VE AE++   M   G+  ++ TY TL+  Y
Sbjct: 185 KRM-VQVG--VVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLY 241

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G   EAL + + M + G+  + V YNS I+    EG +  A+ + S++  K+  P+H
Sbjct: 242 CKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNH 299

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ L  G C+   +++A K+   +  + +     +YN ++  LC+   +  A +LL+ 
Sbjct: 300 VTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNE 359

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  R L  D IT  TLI+ YCK G+++ A++    M +   KP+   Y ++I+G CK   
Sbjct: 360 MSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNE 419

Query: 515 LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L++AK L+ +    G   +  TY+ +++GY     +    A+  E  + GI ++   Y  
Sbjct: 420 LESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRA 479

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
           LI   CK    Q A  L   M   GI  + V YT++
Sbjct: 480 LIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSI 515



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 36/353 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +++ L  AC++ G  E A  ++ ++ VKG    I  +N  LS   K         +   M
Sbjct: 198 IYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRM 257

Query: 208 VSCGYVENVNTFNLVIYALCKE------------------------------CK---LEE 234
              G   ++ ++N +IY  CKE                              CK   LEE
Sbjct: 258 EREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHVTYTTLIDGYCKTNELEE 317

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           AL +   M   G++P VV +N I+ + CQ G +  A KL  +M   S   +  +++T N 
Sbjct: 318 ALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEM---SERKLQADNITCNT 374

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +IN +CK+G ++ A + +  M++AG+  +  TY  LI G+ +    E A  L   M+  G
Sbjct: 375 LINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAG 434

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+   Y+  +     + +++  L +  + + + IC D   Y  L +  C+   ++ A 
Sbjct: 435 FTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAE 494

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           +L   +  + + G++  Y  +        N++AA  +L  M  R L+  +  Y
Sbjct: 495 RLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRLMITVKLY 547



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 3/242 (1%)

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           ++   + A ++  Q+    +    ++  +L+N L K        ++   M+  G++P+I 
Sbjct: 138 KSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIY 197

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            Y  L     K G++E A Q+   M       ++  YN++++  CK      A S+    
Sbjct: 198 IYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRM 257

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           +R G+ LD ++YN+LI G+   G++ EA  MFSE++N     N V Y  LI+  CK    
Sbjct: 258 EREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNA--TPNHVTYTTLIDGYCKTNEL 315

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           ++A ++ K+M   G+ P  VTY +++ +  ++    +  +L ++M    +  DN T N +
Sbjct: 316 EEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTL 375

Query: 645 IS 646
           I+
Sbjct: 376 IN 377



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 5/224 (2%)

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+ +  KS     A Q+   M +  + P +     L++   K G      ++Y+ M +V 
Sbjct: 132 LVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVG 191

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             PN+ IYN + +   K   ++ A+ LL      G+L D  TYNTL++ Y   G   EA 
Sbjct: 192 VVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEAL 251

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI-LHGIIPDYVTYTTLVTR 612
           ++ + M   GI ++ V YN LI   CK G   + RE M++   +    P++VTYTTL+  
Sbjct: 252 SIQNRMEREGINLDIVSYNSLIYGFCKEG---RMREAMRMFSEIKNATPNHVTYTTLIDG 308

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + K    EE +++   M   G+ P   TYN+I+  L  +    D
Sbjct: 309 YCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRD 352



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 5/253 (1%)

Query: 140 EICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           EI  ATP    +  L+    +    E A  + + ++ KG    +  +N+ L  L +   I
Sbjct: 291 EIKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRI 350

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
               KL  EM       +  T N +I A CK   L+ AL    +ML++G+ P+   +  +
Sbjct: 351 RDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKAL 410

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C+  +LE A +L   M  M      P+  T++ I++G+ K   ++    +    + 
Sbjct: 411 IHGFCKTNELESAKEL---MFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLS 467

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            GI  +V  Y  LI    +    + A RL   M  +G+   +V+Y S  +  +  G+V  
Sbjct: 468 RGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSA 527

Query: 378 ALFVLSDMIDKHI 390
           A  +L +M  + +
Sbjct: 528 ASSMLEEMARRRL 540


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 214/401 (53%), Gaps = 3/401 (0%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+   +N  +      GDL+ A+ + R+MG     +  PN+ ++N +I G  K G    A
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPA--PNAFSYNVVIAGLWKAGTDCDA 207

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            ++   M +  +  N  TY T+IDG+ + G  E   RL  +M++ GL PN + YN  +  
Sbjct: 208 VKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSG 267

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L   G +     VL +M  + + PD FTYSIL  G  R G  +    L  + +++ +   
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG 327

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           AY+ +IL+N LCK   ++ A+++L +++  GL+   + Y TLI+GYC+ G++EGA  +++
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQ 387

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
            MK    +P+ + YN++INGL K   +  A  L+   ++ G+  ++ T+NTLI+ Y   G
Sbjct: 388 QMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAG 447

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ + F + S+M+  G+  N V Y  ++N  CK G   +A  ++  M +  ++P    Y 
Sbjct: 448 QLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYN 507

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            ++  + +  S ++   L + M  SGV P   TYN +I  L
Sbjct: 508 AIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 243/490 (49%), Gaps = 8/490 (1%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY-VENVNTFNL 221
            GA++++   + +  + +   WN  +   V   ++     + + M   G    N  ++N+
Sbjct: 137 RGAFELLVAARARPDTFT---WNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNV 193

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           VI  L K     +A+ L+  M +  + PN + +N +I+   + GDLE   +L+ +M +  
Sbjct: 194 VIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQM-LRH 252

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
           G  + PN +T+N +++G C+ GR+     +   M    +  +  TY+ L DG++R G S+
Sbjct: 253 G--LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
             L L +E VK+G+       +  ++ L  +G +  A  VL  +++  +      Y+ L 
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G C+ G ++ AF +  Q+    +  D  +YN LIN L K   +  A  L+  M   G+ 
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDAAKS 520
           P + T+ TLID Y + G +E    +  +M++   KPN+V Y SI+N  CK+   L+A   
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 521 LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L     +  L  A  YN +I+ Y   G   +AF +  +M++ G+  + V YN+LI  LCK
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
                +A EL+  +  +G+ PD ++Y TL++      + +  +EL  +M   G+ P  +T
Sbjct: 551 QSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRT 610

Query: 641 YNAIISPLLG 650
           Y  + S L G
Sbjct: 611 YRMLFSSLGG 620



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 249/510 (48%), Gaps = 13/510 (2%)

Query: 143 KATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSV-SIHAWNNFLSHLVKLNEIGR 199
           +A P  F  +  V+AC   G  + A  +++++   G    +  ++N  ++ L K      
Sbjct: 147 RARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCD 206

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             KL+ EM     V N  T+N +I    K+  LE    L+ +ML+ G+ PNV+ +N++++
Sbjct: 207 AVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLS 266

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G +     +  +M   +   ++P+  T++ + +G  + G  +    +    +K G
Sbjct: 267 GLCRAGRMGETAAVLDEM---ASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKG 323

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +     T + L++G  + G   +A  +   +V  GL+   V+YN+ I+     GD+EGA 
Sbjct: 324 VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAF 383

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG---DAYSYNILI 436
            +   M  + I PDH TY+ L  GL   G V++  + H+ V+E    G      ++N LI
Sbjct: 384 SIFQQMKSRLIRPDHITYNALINGL---GKVERITEAHDLVIEMEKNGVNPSVETFNTLI 440

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +   ++  L     +LS M  +GL P++++YG++++ +CK G I  AV + ++M   +  
Sbjct: 441 DAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVL 500

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAM 555
           P   +YN+II+   +  S D A  L +  +  G+  +I TYN LI G     +I+EA  +
Sbjct: 501 PGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEEL 560

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
              +RN G+A + + YN LI+  C      +A EL K M   GI P   TY  L +    
Sbjct: 561 LDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGG 620

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                E+  L+  M+   V P +  YN ++
Sbjct: 621 AGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 191/371 (51%), Gaps = 14/371 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++E V  G      T ++++  LCK+ K+ +A  +   ++ SG+    V +N +IN  C
Sbjct: 315 LFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYC 374

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q+GDLE A  +F++M       + P+ +T+N +ING  K+ R+  A ++   M K G++ 
Sbjct: 375 QIGDLEGAFSIFQQM---KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNP 431

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V T+ TLID Y R G  E+   +  +M ++GL PN V Y S ++     G +  A+ +L
Sbjct: 432 SVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAIL 491

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM  K + P    Y+ +       G   QAF L  ++    +     +YN+LI  LCK 
Sbjct: 492 DDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQ 551

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           + ++ A++LL S+   GL PD+I+Y TLI   C   N + A+++ + M K   KP+   Y
Sbjct: 552 SQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTY 611

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLD------AITYNTLINGYFINGKIAEAFAMF 556
             + + L     +   ++L Q      +LD      +  YN +++ Y   G+ ++  A+ 
Sbjct: 612 RMLFSSLGGAGRVHEMENLYQQ-----MLDKDVVPCSGIYNIMVDAYAKCGEESKVEALR 666

Query: 557 SEMRNVGIAVN 567
            EM + GIAV 
Sbjct: 667 KEMSDKGIAVG 677



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 127/334 (38%), Gaps = 69/334 (20%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E L+ L++S  +   T  +++ L+    QIG  EGA+ + Q++K +        +N  ++
Sbjct: 349 EVLQTLVNSGLL--QTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALIN 406

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+  I     L  EM   G   +V TFN +I A  +  +LE+   +   M + G+ P
Sbjct: 407 GLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKP 466

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGV------------------------------ 279
           NVV +  I+N  C+ G +  A+ +   M +                              
Sbjct: 467 NVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLA 526

Query: 280 --MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI-------------------------- 311
             M    V P+ VT+N +I G CK  ++  AEE+                          
Sbjct: 527 EKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYR 586

Query: 312 ---------RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
                       M K GI  + RTY  L       G   E   L  +M+ + ++P + +Y
Sbjct: 587 SNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIY 646

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
           N  +      G+      +  +M DK I    +T
Sbjct: 647 NIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 269/558 (48%), Gaps = 42/558 (7%)

Query: 127 SPLEFLEGLLDSYEICKATPA--VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
           S L+    L++  E     P+   + A++ AC ++G    A  +  ++      V++   
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
            + +       ++    +L+ E+V  G   NV  F+++I    K   +E+A  LY RM  
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390

Query: 245 SGIWP----------------------------------NVVCFNMIINEACQVGDLEFA 270
            G+ P                                  +VV +N+++   C++G +  A
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEA 450

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             L+ KM    G  + P+ V++N +I G CK G ++ A E+   +I++G+  N  TY  L
Sbjct: 451 CNLWDKM---IGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTIL 507

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           ++G  + G  E A  + D+MV  G++P +  +NS I+ L   G V  A   L+  I +  
Sbjct: 508 MEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSF 567

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P   TY+ +  G  + G +  A  ++ ++    +  +  +Y  LIN  CKSN +  A +
Sbjct: 568 IPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALK 627

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   M  +GL  DI  Y TLI G+CK  ++E A + +  + +V   PN ++YN +I+   
Sbjct: 628 MHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYR 687

Query: 511 KDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
              +++AA +L +   + +I   D   Y +LI+G    GK++ A  ++SEM   GI  + 
Sbjct: 688 NLNNMEAALNLHKEMINNKIPC-DLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDI 746

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             YN+LIN LC  G  + A +++K M  + I P  + Y TL+    K  + +E   LHD+
Sbjct: 747 FMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDE 806

Query: 629 MVLSGVSPDNQTYNAIIS 646
           M+  G+ PD+ TY+ +++
Sbjct: 807 MLDKGLVPDDTTYDILVN 824



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 235/466 (50%), Gaps = 5/466 (1%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           V+L   G   +L  EMV      NV     +I   C    +  AL L+  +++ G+ PNV
Sbjct: 303 VRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNV 362

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             F+++I    ++G++E A +L+ +M  M    + P     N ++ GF K   +E A  +
Sbjct: 363 AIFSVLIEWCSKIGNVEKANELYTRMKCMG---LQPTVFILNFLLKGFRKQNLLENAYLL 419

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
               ++ GI  +V TY  ++      G   EA  L D+M+ +G+ P+ V YN  I     
Sbjct: 420 LDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCK 478

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +G ++ A  V++ +I+  + P+  TY+IL +G  + G  + AF + +Q++   +V   Y+
Sbjct: 479 KGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYT 538

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +N +IN LCK   ++ A+  L++ I +  IP  +TY  +IDGY K G I+ A  VY  M 
Sbjct: 539 FNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMC 598

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           + E  PN++ Y S+ING CK   +D A  +    +R GL LD   Y TLI G+     + 
Sbjct: 599 RSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDME 658

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A   FS++  VG+  N + YNI+I+        + A  L K MI + I  D   YT+L+
Sbjct: 659 NACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLI 718

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               K       ++L+ +M+  G+ PD   YN +I+ L      E+
Sbjct: 719 DGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLEN 764



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 197/386 (51%), Gaps = 4/386 (1%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           ++G    A ++  K+  KG + S+ ++N+ +    K   +    ++   ++  G   N  
Sbjct: 443 ELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAI 502

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+ +++    K+   E A +++ +M+ +GI P    FN IIN  C+VG +  A     K+
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARD---KL 559

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                 S +P S+T+NCII+G+ K G ++ AE +   M ++ I  NV TY +LI+G+ + 
Sbjct: 560 NTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKS 619

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              + AL++ D+M ++GL  +  VY + I       D+E A    S +++  + P+   Y
Sbjct: 620 NKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVY 679

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +I+         ++ A  LH +++   +  D   Y  LI+ L K   L+ A  L S M+ 
Sbjct: 680 NIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLC 739

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RG++PDI  Y  LI+G C  G +E A ++ + M      P +++YN++I G  K+ +L  
Sbjct: 740 RGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQE 799

Query: 518 AKSLLQASQRIGLL-DAITYNTLING 542
           A  L       GL+ D  TY+ L+NG
Sbjct: 800 AFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/616 (23%), Positives = 262/616 (42%), Gaps = 78/616 (12%)

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV-NWRRFDDALLLMGNLMSANSVSPL 129
           +  P+ AL F+  V     F+ + +  C ++ +L  N     DA                
Sbjct: 72  KADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGDA---------------- 115

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
              + LL+ Y    + PA    LV    +     G        K+    V    +N  L 
Sbjct: 116 ---KHLLNKYVFGDSAPAA-KVLVELLVECAERYG-------FKLSDSRV----FNYLLI 160

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
             V+ N+I    + ++ M+  G V  V   N+++ A+ +   +E+A  L+  M +  I+ 
Sbjct: 161 SYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYG 220

Query: 250 -----------------------------------NVVCFNMIINEACQVGDLEFALKLF 274
                                              +   ++++I   C+  DL+ A KL 
Sbjct: 221 DCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKL- 279

Query: 275 RKMGVMSGDSVL---PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
                + GD  L   P+  T+  +I    +LG    A  ++  M+ + +  NV    +LI
Sbjct: 280 -----VEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLI 334

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            GY   G    ALRL DE+V+ G+ PN  +++  I W    G+VE A  + + M    + 
Sbjct: 335 KGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQ 394

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P  F  + L KG  +   ++ A+ L +  + E+ +    +YNI++ +LC+   +  A  L
Sbjct: 395 PTVFILNFLLKGFRKQNLLENAYLLLDGAV-ENGIASVVTYNIVLLWLCELGKVNEACNL 453

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              MI +G+ P +++Y  +I G+CK G ++ A +V   + +   KPN + Y  ++ G  K
Sbjct: 454 WDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFK 513

Query: 512 DASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               + A ++       G++    T+N++ING    G+++EA    +           + 
Sbjct: 514 KGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMT 573

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN +I+   K G    A  + + M    I P+ +TYT+L+  F K+   +  +++HDDM 
Sbjct: 574 YNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMK 633

Query: 631 LSGVSPDNQTYNAIIS 646
             G+  D   Y  +I+
Sbjct: 634 RKGLELDITVYATLIA 649



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 46/434 (10%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +  +  K+ EA+  +  ML+ G+ P V   N+++    +   +E A +LF +M 
Sbjct: 155 FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMA 214

Query: 279 --VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--IDCNVRTYATLIDGY 334
              + GD      +   C+  G       +F E  RY    AG  +  +  +Y+ +I   
Sbjct: 215 ERRIYGDCYTLQVLMRACLKGG-------KFVEAERYFGQAAGRGLKLDAASYSIVIQAV 267

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            RG   + A +L +   + G +P+   Y + I      G+   AL +  +M+D  +  + 
Sbjct: 268 CRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNV 327

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
              + L KG C  G V  A +L ++V+E                                
Sbjct: 328 AVATSLIKGYCVRGDVNSALRLFDEVVE-------------------------------- 355

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
               G+ P++  +  LI+   K GN+E A ++Y  MK +  +P + I N ++ G  K   
Sbjct: 356 ---VGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNL 412

Query: 515 LDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           L+ A  LL  +   G+   +TYN ++      GK+ EA  ++ +M   GI  + V YN +
Sbjct: 413 LENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHM 472

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I   CK GC   A E+M  +I  G+ P+ +TYT L+    K    E    + D MV +G+
Sbjct: 473 ILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGI 532

Query: 635 SPDNQTYNAIISPL 648
            P + T+N+II+ L
Sbjct: 533 VPTDYTFNSIINGL 546



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 165/344 (47%), Gaps = 5/344 (1%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E + G+++S    K     +  L+    + G  E A+++  ++   G   + + +N+ ++
Sbjct: 487 EVMNGIIESG--LKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIIN 544

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+  +          +   ++    T+N +I    KE  ++ A S+Y  M +S I P
Sbjct: 545 GLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISP 604

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           NV+ +  +IN  C+   ++ ALK+      M    +  +   +  +I GFCK+  +E A 
Sbjct: 605 NVITYTSLINGFCKSNKMDLALKMHDD---MKRKGLELDITVYATLIAGFCKMQDMENAC 661

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           +    +++ G+  N   Y  +I  Y    + E AL L  EM+   +  +  +Y S I  L
Sbjct: 662 KFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGL 721

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             EG +  AL + S+M+ + I PD F Y++L  GLC +G ++ A K+  ++   ++    
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             YN LI    K  NL  A +L   M+ +GL+PD  TY  L++G
Sbjct: 782 LLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 250/502 (49%), Gaps = 4/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ A +RA  +I   +GA  ++ +++ KG   S   +N  +  L + N +    ++   M
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSM 256

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G V +  T+  ++Y  C+  +LE AL +   ML     P+V   + +++   + G +
Sbjct: 257 VERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHI 316

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A +L   +G +    ++PN    N +I+  CK  R   AE +   M   G++ N  TY
Sbjct: 317 DKAFRLACHLGELG---MVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           A LI    + G  ++AL + D M ++G+      YNS I+      +   A  +L++M++
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + P   +YS L  GLCR G +  A +LH ++    + G+ Y++  LI+  CK  N+  
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDE 493

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L   MI   ++P+ +T+  +I+GYC+ GN+  A Q+Y+ M      P+   Y S+I+
Sbjct: 494 AARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLIS 553

Query: 508 GLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LC       AK  +        +L++ +  TL+ G+   G++ E + ++ EMR  G+ +
Sbjct: 554 VLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKL 613

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + + + +++    K    ++   L + M   G+ PD V +T ++   SK  +  + +   
Sbjct: 614 DLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCW 673

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           D M+  G SP+  TY  +I+ L
Sbjct: 674 DKMIADGCSPNVVTYTVLINHL 695



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 248/532 (46%), Gaps = 44/532 (8%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +V    + G  + A+ +   L   G   ++ A N  +  L K        +L++ M + G
Sbjct: 306 MVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRG 365

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ-------- 263
              N  T+ ++I++LCK   +++AL ++ RM + GI   V  +N +IN  CQ        
Sbjct: 366 LEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQAR 425

Query: 264 ---------------------------VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
                                       GDL  A++L R+M   + + V  N  T   +I
Sbjct: 426 GLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREM---ARNGVSGNVYTFTTLI 482

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +GFCK G ++ A  +   MI + +  N  T+  +I+GY R G+  +A +L D+MV RGL 
Sbjct: 483 SGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLT 542

Query: 357 PNNVVYNSTIHWL-FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           P+N  Y S I  L    G ++   FV  D+ +  +  + F+ + L  G C+ G + + + 
Sbjct: 543 PDNYTYRSLISVLCLTLGAMKAKEFV-DDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           + +++    +  D  S+ +++    K ++      L   M  +G+ PD + +  +ID + 
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG--LLDA 533
           K  NI  A+  ++ M      PN+V Y  +IN LCK   L +A+ L +    +G  L ++
Sbjct: 662 KEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCE-EMLVGRFLPNS 720

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TYN  ++     G++ +A  + + +   G   N V +N LI   CK G  Q A +LM+ 
Sbjct: 721 FTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQN 779

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
               G  PD ++Y+T++    K     +  +L ++M+  G+ PD   YN +I
Sbjct: 780 NTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 258/550 (46%), Gaps = 62/550 (11%)

Query: 54  MAPSL--TNSLVNRVVSE--FRKSPKLALEFYTWVGENNRFSHSLESSCAI-VHLLVNWR 108
           M P+L   N+L++++  +  FR++ +L      + G  NR     E + AI +H L    
Sbjct: 331 MVPNLFACNALIDKLCKDRRFREAERL------FRGMANRGLEPNEVTYAILIHSLCKRG 384

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
             DDAL +   +            +G+       + T   +++L+    Q      A  +
Sbjct: 385 MMDDALCMFDRMRE----------KGI-------RVTVYPYNSLINGYCQHDNFHQARGL 427

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + ++  KG + S  +++  ++ L +  ++    +L++EM   G   NV TF  +I   CK
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----------- 277
           +  ++EA  L+ +M+ S + PN V FN++I   C+VG++  A +L+ +M           
Sbjct: 488 DGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYT 547

Query: 278 ------------GVMSG---------DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
                       G M           + V+ NS +   ++ GFCK GR+     I   M 
Sbjct: 548 YRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMR 607

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G+  ++ ++  ++    +    E+   L  EM ++G+ P+NV +   I     E ++ 
Sbjct: 608 ARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIV 667

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL     MI     P+  TY++L   LC++G +  A  L  ++L    + ++++YN  +
Sbjct: 668 QALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFL 727

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           ++L     L  AK +L + I+ G + + +T+ TLI G+CK G I+GA+ + +N  +    
Sbjct: 728 DFLANEGELEKAK-VLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFF 786

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAM 555
           P+ + Y++IIN LCK   ++ A  L       GL  D + YN LI    I+G+  +   +
Sbjct: 787 PDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGI 846

Query: 556 FSEMRNVGIA 565
           +S+M N+  A
Sbjct: 847 YSDMVNLKYA 856



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 184/407 (45%), Gaps = 39/407 (9%)

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T + I+    K+ +   A ++   M++     +   Y   I  Y    + + A  L   M
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRM 221

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN--- 407
             +G+  + V YN  ++ L     V  A+ V + M+++ I  D  TY  L  G CR    
Sbjct: 222 ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL 281

Query: 408 --------------------------------GCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
                                           G + +AF+L   + E  MV + ++ N L
Sbjct: 282 EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNAL 341

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ LCK      A++L   M  RGL P+ +TY  LI   CK G ++ A+ +++ M++   
Sbjct: 342 IDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGI 401

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFA 554
           +  +  YNS+ING C+  +   A+ LL      GL   A +Y+ LI G    G +A A  
Sbjct: 402 RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAME 461

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  EM   G++ N   +  LI+  CK G   +A  L   MI   ++P+ VT+  ++  + 
Sbjct: 462 LHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYC 521

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL---LGEKSAEDQV 658
           +  +  +  +L+D MV  G++PDN TY ++IS L   LG   A++ V
Sbjct: 522 RVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFV 568



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 170/351 (48%), Gaps = 1/351 (0%)

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           + + +L R   A ++    + +GI     T + ++    +      A  L DEMV+    
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            +  VY + I       +++GA  +L+ M  K +      Y++L  GLCRN  V +A ++
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            N ++E  +V D  +Y  L+   C++  L  A ++   M+    +P + +   ++DG  K
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
            G+I+ A ++  ++ ++   PNL   N++I+ LCKD     A+ L +     GL  + +T
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVT 372

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y  LI+     G + +A  MF  MR  GI V    YN LIN  C+   + QAR L+  M+
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             G+ P   +Y+ L+    +       +ELH +M  +GVS +  T+  +IS
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLIS 483


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 250/500 (50%), Gaps = 14/500 (2%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            TP +  F  L+    +I      + +  ++++ G S      N  L+ L  +N +G   
Sbjct: 92  PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGL 151

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +   ++  GY+ ++ T+  +I  LC E ++ +A  L+ RM K G  PN + +  ++   
Sbjct: 152 AVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGL 211

Query: 262 CQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           C+ G++  ALKL ++M     + G +  P  ++++ II+  CK  R + A ++   M   
Sbjct: 212 CRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQ 271

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+   V +Y +L+         EEA RL +EMV +G+ PN V +N  I  L  EG V  A
Sbjct: 272 GMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEA 323

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L  MI + I P+  TY+ L +G C  G +  A +L   +  +    D   Y +LIN 
Sbjct: 324 KDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLING 383

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            CK++ +  A +L + M+  G  PD+ TYG L+ G  +GG +  A +++  MK      +
Sbjct: 384 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGD 443

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           L IY   +NGLCK+  L  A  L    +   + LD   +N LI+G    GK+  A+ +F 
Sbjct: 444 LYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFE 503

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           ++    +  + V YNI+I+  C+ G   +A  L + M  +G  PD +TY TL+  F ++ 
Sbjct: 504 KLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESK 563

Query: 618 SPEEVIELHDDMVLSGVSPD 637
             E+V+EL   MV   VS D
Sbjct: 564 KLEKVVELLHMMVQRDVSLD 583



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 247/501 (49%), Gaps = 18/501 (3%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+     +     +  + ++ + LS L K+    + + LY +M   G   +  T N+++ 
Sbjct: 80  AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   ++ E L++   +L+ G  P++V +  +I   C    +  A  LF +M  +    
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG--- 196

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA----GIDCN--VRTYATLIDGYARGG 338
             PN++T+  ++ G C+ G +  A ++   M+      GI+    V +Y+ +ID   +  
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             +EA  L +EM  +G+ P  + Y S + W       E A  + ++M+++ + P+  T++
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTS-LMW-------EEAKRLFNEMVNQGVQPNVVTFN 308

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           +L   LC+ G V +A  L   +++  +V +  +YN LI   C   +L +A++L  SM  +
Sbjct: 309 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 368

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G  PD+I Y  LI+GYCK   +E A+++Y  M +V K+P++  Y +++ GL +   +  A
Sbjct: 369 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 428

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K L    +  G+  D   Y   +NG   NG + EA  +F+++++  I ++   +N LI+ 
Sbjct: 429 KKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDG 488

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G  + A EL + +    + PD VTY  ++  F +     +   L   M  +G +PD
Sbjct: 489 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 548

Query: 638 NQTYNAIISPLLGEKSAEDQV 658
             TY  +I      K  E  V
Sbjct: 549 KITYATLIRGFFESKKLEKVV 569



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 188/394 (47%), Gaps = 16/394 (4%)

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G++  A++ F+   +M   +  P   +   +++G  K+        +   M  +GI 
Sbjct: 70  CKTGNIT-AIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS 128

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T   L++         E L +   +++RG +P+ V Y + I  L  E  +  A  +
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALL 188

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL-EEHMVGDAY-----SYNIL 435
            + M      P+  TY  L KGLCR G +  A KLH ++L +  + G  +     SY+I+
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+ LCK      A+ L   M V+G+ P +I+Y +L+         E A +++  M     
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGV 300

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFA 554
           +PN+V +N +I+ LCK+  +  AK LL+   + G++ + +TYN+LI G+ + G +  A  
Sbjct: 301 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE 360

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F  M + G   + + Y +LIN  CK    ++A +L   M+  G  PD  TY  L+T   
Sbjct: 361 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF 420

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +     +  +L   M + G+  D   Y   ++ L
Sbjct: 421 QGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGL 454


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 227/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  YKE++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N   + TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    ++ +M  K + PD  TY+ L  G C+ G +  AF+   Q+++E++  D  +Y  
Sbjct: 298 LKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+   ++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L     L+  M ++GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 158/299 (52%), Gaps = 1/299 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ + + 
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFT 251

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L     L+      
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMK 311

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF    +M    I +++V Y  LI+ LC+ G    A
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDA 371

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 372 EKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + + + TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +Q   
Sbjct: 244 VPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHH 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D   Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+   H+L+S C ++H L   + F +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTVRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V      N L HL+K       W  YK
Sbjct: 66  IYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  R++ A  +   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ +G  P+ V YN+ I+ L  +GD++ A ++L +M
Sbjct: 243 TFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+L  ++++E +  D   Y  LI  LC+    
Sbjct: 303 SRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRA 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +++ +CK G+++ A ++   M++  + P +V
Sbjct: 363 VDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVV 417



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 152/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG +  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  ++ Q+L +    D  +YN LI  LCK  +L  A+ LL  M  +GL PD ITY TLID
Sbjct: 260 AMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A ++ E M K   + + V+Y ++I GLC++     A+ +L+   R+GL  
Sbjct: 320 GSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  ++N +   G + +A  +  EM+  G
Sbjct: 380 DDETYTMIMNEFCKKGDVKKASELLREMQRNG 411



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  + G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L N +    +  D Y+Y++LIN LCK + +  A  L   M+  GL+P+ +T+ 
Sbjct: 186 DLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A+ +Y  M      P++V YN++I GLCK   L  A+ LL    R 
Sbjct: 246 TLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRK 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF +   M    I ++ V Y  LI  LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F K    ++  EL  +M  +G  P
Sbjct: 366 EKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 154/292 (52%), Gaps = 1/292 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + + M    + PD +TYS+L  GLC+   + +A  L  ++L+  +V +  ++  
Sbjct: 187 LDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTT 246

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK+  L  A  +   M+ +G  PD++TY TLI G CK G+++ A  + + M +  
Sbjct: 247 LIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKG 306

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            KP+ + Y ++I+G CK+  L+ A  L +   +  + LD + Y  LI G    G+  +A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAE 366

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            M  EM  VG+  +   Y +++N  CK G  ++A EL++ M  +G +P  VT
Sbjct: 367 KMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M N G + + V YN LI  LCK G  +QAR 
Sbjct: 238 VPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARY 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M   G+ PD +TYTTL+    K    E   EL + M+   +  D+  Y A+I  L 
Sbjct: 298 LLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLC 357

Query: 650 GEKSAED 656
            E  A D
Sbjct: 358 QEGRAVD 364



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A  ++  M      PN V + ++I+G CK+  
Sbjct: 197 MRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD A  + +     G   D +TYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 LDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A EL + MI   I  D V YT L+    +     +  ++  +M+  G
Sbjct: 317 LIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVG 376

Query: 634 VSPDNQTYNAIIS 646
           + PD++TY  I++
Sbjct: 377 LKPDDETYTMIMN 389


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 212/399 (53%), Gaps = 4/399 (1%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+VV ++ +IN  C  G+L+  LKL ++M +     + PN  T+N II   CK G+V
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQM---KGLKPNLYTYNSIILLLCKSGKV 61

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + AE +   MI  GI  +   Y TLIDG+ + G+ + A +L DEM K+ ++P+ + Y + 
Sbjct: 62  DDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAV 121

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L   G +  A  V + M  + + PD  TY+ L  G C++G +++AF LHNQ+++  +
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             +  +Y  L + LCK   +  A +LL  M  +GL  +I TY +L++G CK GNI  AV+
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYF 544
           + E M+     P+ + + ++++  CK   +  A  LL+     GL    IT+N L+NG+ 
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFC 301

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
           ++G + +   + + M   GI  N   YN L+   C     +   E+ K M   G++PD  
Sbjct: 302 MSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSN 361

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
           TY  L+    K  + +E   LH +M   G +    +YN+
Sbjct: 362 TYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNS 400



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 235/460 (51%), Gaps = 4/460 (0%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +K +G +  + +++  ++      E+ +  KL +EM   G   N+ T+N +I  LCK  K
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A  +   M+  GI P+ V +  +I+  C++G+++ A KLF +   M    ++P+ + 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDE---MEKQRIVPDFIA 117

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +I G C+ G++  A+++   M   G++ +  TY TLIDGY + G  E+A  L ++MV
Sbjct: 118 YTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV 177

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + GL PN V Y +    L   G V+ A  +L +M  K +  +  TY+ L  GLC++G ++
Sbjct: 178 QSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIR 237

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           QA KL  ++    M  D  ++  L++  CK+  +  A +LL  M+ RGL P +IT+  L+
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLM 297

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           +G+C  G +E   ++   M +    PN   YNS++   C   ++     + +     G++
Sbjct: 298 NGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVM 357

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D+ TYN LI G+     + EA+ +  EM   G  +    YN +I    K     +AREL
Sbjct: 358 PDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAREL 417

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
            + M   G+  D   Y   V       + E  +EL D+ +
Sbjct: 418 FEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAI 457



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 226/446 (50%), Gaps = 4/446 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   +V +++ VI   C   +L++ L L   M   G+ PN+  +N II   C+ G ++ A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            ++ R+M       ++P++V +  +I+GFCKLG ++ A ++   M K  I  +   Y  +
Sbjct: 65  ERVLREM---INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAV 121

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I G  R G   EA ++ ++M  RG+ P+ V Y + I      G++E A  + + M+   +
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  TY+ L  GLC+ G V  A +L +++  + +  +  +YN L+N LCKS N+  A +
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L+  M V G+ PD IT+ TL+D YCK G +  A ++   M     +P ++ +N ++NG C
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFC 301

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
               L+  + LL      G++ +  TYN+L+  Y I   +     ++  M   G+  +  
Sbjct: 302 MSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSN 361

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YNILI   CK    ++A  L K M   G      +Y +++  F K     E  EL ++M
Sbjct: 362 TYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEM 421

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAE 655
              G++ D + YN  +    GE + E
Sbjct: 422 RREGMAADAEIYNLFVDISYGEGNME 447



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 225/432 (52%), Gaps = 4/432 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  +    +IQ++++KG   +++ +N+ +  L K  ++    ++ +EM++ G V +   +
Sbjct: 24  GELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY 83

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I   CK   ++ A  L+  M K  I P+ + +  +I   C+ G +  A K+F K   
Sbjct: 84  TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNK--- 140

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    V P+ VT+  +I+G+CK G +E A  +   M+++G+  NV TY  L DG  + G 
Sbjct: 141 MFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ 200

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            + A  L  EM  +GL  N   YNS ++ L   G++  A+ ++ +M    + PD  T++ 
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTT 260

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L    C+ G + +A +L  ++L+  +     ++N+L+N  C S  L   ++LL+ M+ +G
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           ++P+  TY +L+  YC   N+    ++Y+ M      P+   YN +I G CK  ++  A 
Sbjct: 321 IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAW 380

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L +     G  L A +YN++I G+F   KI+EA  +F EMR  G+A +   YN+ ++  
Sbjct: 381 FLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDIS 440

Query: 579 CKFGCYQQAREL 590
              G  + A EL
Sbjct: 441 YGEGNMETALEL 452



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 215/414 (51%), Gaps = 8/414 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++++    + G  + A  V++++  +G       +   +    KL  I   +KL+ EM
Sbjct: 47  TYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEM 106

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                V +   +  VI  LC+  K+ EA  ++ +M   G+ P+ V +  +I+  C+ G++
Sbjct: 107 EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEM 166

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A  L  +M V SG  + PN VT+  + +G CKLG+V+ A E+ + M   G+  N+ TY
Sbjct: 167 EKAFSLHNQM-VQSG--LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY 223

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L++G  + G+  +A++L +EM   G+ P+ + + + +      G++  A  +L +M+D
Sbjct: 224 NSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD 283

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P   T+++L  G C +G ++   +L   +LE+ ++ +  +YN L+   C  NN+  
Sbjct: 284 RGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRC 343

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI--YNSI 505
             ++   M  RG++PD  TY  LI G+CK  N++ A  +++ M   EK  NL    YNSI
Sbjct: 344 TTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM--AEKGFNLTASSYNSI 401

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           I G  K   +  A+ L +  +R G+  DA  YN  ++  +  G +  A  +  E
Sbjct: 402 IKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 162/305 (53%), Gaps = 1/305 (0%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG  P+ V Y++ I+     G+++  L ++ +M  K + P+ +TY+ +   LC++G V  
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A ++  +++ + +V D   Y  LI+  CK  N+ AA +L   M  + ++PD I Y  +I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G C+ G +  A +V+  M     +P+ V Y ++I+G CK   ++ A SL     + GL  
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +TY  L +G    G++  A  +  EM   G+ +N   YN L+N LCK G  +QA +LM
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + M + G+ PD +T+TTL+  + K     +  EL  +M+  G+ P   T+N +++     
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 652 KSAED 656
              ED
Sbjct: 304 GMLED 308



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 1/195 (0%)

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  RG  PD+++Y T+I+GYC GG ++  +++ + M+    KPNL  YNSII  LCK   
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A+ +L+     G++ D + Y TLI+G+   G I  A+ +F EM    I  + + Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I  LC+ G   +A ++   M   G+ PD VTYTTL+  + K+   E+   LH+ MV SG
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 634 VSPDNQTYNAIISPL 648
           ++P+  TY A+   L
Sbjct: 181 LTPNVVTYTALADGL 195



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 45/369 (12%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           G +M A+ V    F  G+       +     +  L+    + G  E A+ +  ++   G 
Sbjct: 129 GKMMEADKVFNKMFSRGV-------EPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           + ++  +      L KL ++    +L  EM   G   N+ T+N ++  LCK   + +A+ 
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L   M  +G++P+ + F  +++  C+ G++  A +L R+M       + P  +T N ++N
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM---LDRGLQPTVITFNVLMN 298

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           GFC  G +E  E +   M++ GI  N  TY +L+  Y    +      +   M  RG+MP
Sbjct: 299 GFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMP 358

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           ++  YN                                   IL KG C+   +K+A+ LH
Sbjct: 359 DSNTYN-----------------------------------ILIKGHCKARNMKEAWFLH 383

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++ E+     A SYN +I    K   ++ A++L   M   G+  D   Y   +D     
Sbjct: 384 KEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGE 443

Query: 478 GNIEGAVQV 486
           GN+E A+++
Sbjct: 444 GNMETALEL 452



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 22/323 (6%)

Query: 119 NLMSANSVSPLE-----FLEGLLDSYEICKA------------TPAV--FDALVRACTQI 159
           N M +  V P E      ++G   S E+ KA            TP V  + AL     ++
Sbjct: 139 NKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKL 198

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +++ ++  KG  ++I  +N+ ++ L K   I +  KL +EM   G   +  TF
Sbjct: 199 GQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITF 258

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             ++ A CK  ++ +A  L   ML  G+ P V+ FN+++N  C  G LE   +L   +  
Sbjct: 259 TTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL---LAW 315

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    ++PN+ T+N ++  +C    +    EI   M   G+  +  TY  LI G+ +  +
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARN 375

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA  L  EM ++G       YNS I   F +  +  A  +  +M  + +  D   Y++
Sbjct: 376 MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435

Query: 400 LTKGLCRNGCVKQAFKLHNQVLE 422
                   G ++ A +L ++ +E
Sbjct: 436 FVDISYGEGNMETALELCDEAIE 458



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 157/344 (45%), Gaps = 14/344 (4%)

Query: 46  RKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNR-FS-HSLESSCAIVHL 103
           R  K++E  A  + N + +R V     +    ++ Y   GE  + FS H+      +   
Sbjct: 127 RCGKMME--ADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           +V +    D L  +G + +AN +      +GL     IC      +++LV    + G   
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGL--QLNIC-----TYNSLVNGLCKSGNIR 237

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A  ++++++V G       +   +    K  E+ +  +L +EM+  G    V TFN+++
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLM 297

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
              C    LE+   L   ML+ GI PN   +N ++ + C   ++    ++++ M      
Sbjct: 298 NGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM---CAR 354

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V+P+S T+N +I G CK   ++ A  +   M + G +    +Y ++I G+ +     EA
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEA 414

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L +EM + G+  +  +YN  +   + EG++E AL +  + I+
Sbjct: 415 RELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 241/498 (48%), Gaps = 15/498 (3%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV---S 209
           +R   + G  E  +  ++ +  +G    I A  + +  L K    G+ WK  + M     
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCK---TGKTWKATRVMEILED 173

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V +V T+N++I   CK  ++  AL L  RM    + P+VV +N I+   C  G L+ 
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKE 230

Query: 270 ALKLF-RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
           A+++  R+M         P+ +T+  +I   CK   V  A ++   M   G   +V TY 
Sbjct: 231 AMEVLDRQMQ----RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 286

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LI+G  + G  +EA+R  + M   G  PN + +N  +  + + G    A   L++MI K
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P   T++IL   LCR G + +A  +  ++ +     ++ SYN L++ LCK   +  A
Sbjct: 347 GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERA 406

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            + L  M+ RG  PDI+TY TL+   CK G ++ AV++   +      P L+ YN++I+G
Sbjct: 407 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG 466

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           L K    D A  LL   +  GL  D ITY+TL+ G    GK+ EA A F ++  +G+  N
Sbjct: 467 LSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPN 526

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + YN ++  LCK     +A + +  M+  G  P   +Y  L+   +     +E +EL +
Sbjct: 527 AITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLN 586

Query: 628 DMVLSGVSPDNQTYNAII 645
           ++   GV   +     ++
Sbjct: 587 ELCSRGVVKKSSAEQVVV 604



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 225/451 (49%), Gaps = 7/451 (1%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           +L+R   + G T  A  V++ L+  G    +  +N  +S   K  EIG   +L   M   
Sbjct: 150 SLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM--- 206

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
               +V T+N ++  LC   KL+EA+ +  R ++   +P+V+ + ++I   C+   +  A
Sbjct: 207 SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQA 266

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           +KL  +   M      P+ VT+N +ING CK GR++ A      M   G   NV T+  +
Sbjct: 267 MKLLDE---MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNII 323

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           +      G   +A +   EM+++G  P+ V +N  I++L  +G +  A+ VL  M     
Sbjct: 324 LRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGC 383

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  +Y+ L   LC++  +++A +  + ++      D  +YN L+  LCK   +  A +
Sbjct: 384 TPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 443

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L+ +  +G  P +ITY T+IDG  K G  + A+++ + MK    KP+++ Y++++ GL 
Sbjct: 444 ILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLS 503

Query: 511 KDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           ++  +D A +     + +G+  +AITYN+++ G     +   A    + M   G    + 
Sbjct: 504 REGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTET 563

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGII 600
            Y ILI  L   G  ++A EL+  +   G++
Sbjct: 564 SYMILIEGLAYEGLAKEALELLNELCSRGVV 594



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 210/433 (48%), Gaps = 9/433 (2%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +++  E   A P V  ++ L+    + G    A  ++ ++ V   S  +  +N  L  L 
Sbjct: 167 VMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLC 223

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
              ++    ++    +      +V T+ ++I A CKE  + +A+ L   M   G  P+VV
Sbjct: 224 DSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVV 283

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N++IN  C+ G L+ A++    M         PN +THN I+   C  GR   AE+  
Sbjct: 284 TYNVLINGICKEGRLDEAIRFLNHM---PSYGCQPNVITHNIILRSMCSTGRWMDAEKFL 340

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             MI+ G   +V T+  LI+   R G    A+ + ++M + G  PN++ YN  +H L  +
Sbjct: 341 AEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKD 400

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             +E A+  L  M+ +   PD  TY+ L   LC++G V  A ++ NQ+  +       +Y
Sbjct: 401 KKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITY 460

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N +I+ L K      A +LL  M  +GL PDIITY TL+ G  + G ++ A+  + ++++
Sbjct: 461 NTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEE 520

Query: 493 VEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           +  KPN + YNSI+ GLCK   ++ A   L     R       +Y  LI G    G   E
Sbjct: 521 MGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKE 580

Query: 552 AFAMFSEMRNVGI 564
           A  + +E+ + G+
Sbjct: 581 ALELLNELCSRGV 593



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 193/395 (48%), Gaps = 7/395 (1%)

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+LE   K    M V  GD  +P+ +    +I G CK G+   A  +   +  +G   +V
Sbjct: 124 GELEEGFKFLEDM-VCRGD--IPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LI GY + G    AL+L D M    + P+ V YN+ +  L   G ++ A+ VL  
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            + +   PD  TY+IL +  C+   V QA KL +++ ++    D  +YN+LIN +CK   
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A + L+ M   G  P++IT+  ++   C  G    A +    M +    P++V +N 
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN LC+   +  A  +L+   + G   ++++YN L++    + K+  A      M + G
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
              + V YN L+  LCK G    A E++  +   G  P  +TY T++   SK    ++ I
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAI 477

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +L D+M   G+ PD  TY+ ++  L  E   ++ +
Sbjct: 478 KLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 134/296 (45%), Gaps = 38/296 (12%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+      + ++R+    G    A   + ++  KG S S+  +N  ++ L +   IGR  
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            + ++M   G   N  ++N +++ALCK+ K+E A+     M+  G +P++V +N ++   
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G ++ A+++  ++G      VL   +T+N +I+G  K+G+ + A ++   M   G+ 
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVL---ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489

Query: 322 CNVRTYATLIDGYARGGSSEEA-----------------------LRLCDE--------- 349
            ++ TY+TL+ G +R G  +EA                       L LC           
Sbjct: 490 PDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDF 549

Query: 350 ---MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
              MV RG  P    Y   I  L  EG  + AL +L+++  + +        ++ K
Sbjct: 550 LAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 235/467 (50%), Gaps = 4/467 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  ++ F S + +  +        K++   G   N+ T N++I   C+ CK   A S+ 
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +++K G  P+   FN +I      G +  A+ L  +M V +G    P+ VT+N I+NG 
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENG--CQPDVVTYNSIVNGI 203

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C+ G    A ++   M +  +  +V TY+T+ID   R G  + A+ L  EM  +G+  + 
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V YNS +  L   G       +L DM+ + I P+  T+++L     + G +++A +L+ +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++   +  +  +YN L++  C  N L+ A  +L  M+     PDI+T+ +LI GYC    
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++  ++V+ N+ K     N V Y+ ++ G C+   +  A+ L Q     G+L D +TY  
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G   NGK+ +A  +F +++   + +  V Y  +I  +CK G  + A  L   +   G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           + P+ +TYT +++   K  S  E   L   M   G +P++ TYN +I
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 218/427 (51%), Gaps = 4/427 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K ++A++L+  M++S   P++V F+   +   +       L   +++ +   + +  N  
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL---NGIAHNIY 124

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +IN FC+  +  FA  +   ++K G + +  T+ TLI G    G   EA+ L D M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ G  P+ V YNS ++ +   GD   AL +L  M ++++  D FTYS +   LCR+GC+
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A  L  ++  + +     +YN L+  LCK+        LL  M+ R ++P++IT+  L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +D + K G ++ A ++Y+ M      PN++ YN++++G C    L  A ++L    R   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D +T+ +LI GY +  ++ +   +F  +   G+  N V Y+IL+   C+ G  + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L + M+ HG++PD +TY  L+     N   E+ +E+ +D+  S +      Y  II  + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 650 GEKSAED 656
                ED
Sbjct: 485 KGGKVED 491



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 239/515 (46%), Gaps = 66/515 (12%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D  ++L++ G + +I+  N  ++   +  +    + +  +++  GY  +  TFN +I  L
Sbjct: 109 DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL 168

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
             E K+ EA+ L  RM+++G  P+VV +N I+N  C+ GD   AL L RKM         
Sbjct: 169 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 228

Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
                                    M    +  + VT+N ++ G CK G+      +   
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+   I  NV T+  L+D + + G  +EA  L  EM+ RG+ PN + YN+ +     +  
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  +L  M+     PD  T++ L KG C    V    K+   + +  +V +A +Y+I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+   C+S  +  A++L   M+  G++PD++TYG L+DG C  G +E A++++E+++K +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
               +V+Y +II G+CK                                   GK+ +A+ 
Sbjct: 469 MDLGIVMYTTIIEGMCK----------------------------------GGKVEDAWN 494

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F  +   G+  N + Y ++I+ LCK G   +A  L++ M   G  P+  TY TL+    
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++       +L ++M   G S D  +   +I  LL
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 217/433 (50%), Gaps = 4/433 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F+ L++     G    A  ++ ++   G    +  +N+ ++ + +  +      L ++
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V T++ +I +LC++  ++ A+SL+  M   GI  +VV +N ++   C+ G 
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
                 L +    M    ++PN +T N +++ F K G+++ A E+   MI  GI  N+ T
Sbjct: 279 WNDGALLLKD---MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY       EA  + D MV+    P+ V + S I        V+  + V  ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + +  +  TYSIL +G C++G +K A +L  +++   ++ D  +Y IL++ LC +  L 
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++   +    +   I+ Y T+I+G CKGG +E A  ++ ++     KPN++ Y  +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK  SL  A  LL+  +  G   +  TYNTLI  +  +G +  +  +  EM++ G +
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 566 VNKVGYNILINFL 578
            +     ++I+ L
Sbjct: 576 ADASSIKMVIDML 588



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 196/389 (50%), Gaps = 3/389 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++++V    + G T  A D+++K++ +     +  ++  +  L +   I    
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   +V T+N ++  LCK  K  +   L   M+   I PNV+ FN++++  
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L+ A +L+++M +  G S  PN +T+N +++G+C   R+  A  +   M++    
Sbjct: 309 VKEGKLQEANELYKEM-ITRGIS--PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ T+ +LI GY      ++ +++   + KRGL+ N V Y+  +      G ++ A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + PD  TY IL  GLC NG +++A ++   + +  M      Y  +I  +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  L  S+  +G+ P+++TY  +I G CK G++  A  +   M++    PN   
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL 530
           YN++I    +D  L A+  L++  +  G 
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGF 574



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 176/365 (48%), Gaps = 38/365 (10%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KA    +  ++ +  + G  + A  + ++++ KG   S+  +N+ +  L K  +      
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN--- 259
           L K+MVS   V NV TFN+++    KE KL+EA  LY  M+  GI PN++ +N +++   
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344

Query: 260 ------EA--------------------------CQVGDLEFALKLFRKMGVMSGDSVLP 287
                 EA                          C V  ++  +K+FR +   S   ++ 
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI---SKRGLVA 401

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N+VT++ ++ GFC+ G+++ AEE+   M+  G+  +V TY  L+DG    G  E+AL + 
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +++ K  +    V+Y + I  +   G VE A  +   +  K + P+  TY+++  GLC+ 
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + +A  L  ++ E+    +  +YN LI    +  +L A+ +L+  M   G   D  + 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 468 GTLID 472
             +ID
Sbjct: 582 KMVID 586



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 1/288 (0%)

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           NV +   +     +   + A+ +  +MI     P    +S     + R            
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           Q+    +  + Y+ NI+IN  C+      A  +L  ++  G  PD  T+ TLI G    G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYN 537
            +  AV + + M +   +P++V YNSI+NG+C+      A  LL+   +R    D  TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T+I+    +G I  A ++F EM   GI  + V YN L+  LCK G +     L+K M+  
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            I+P+ +T+  L+  F K    +E  EL+ +M+  G+SP+  TYN ++
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 160/344 (46%), Gaps = 43/344 (12%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K++   +++LVR   + G       +++ +  +    ++  +N  L   VK  ++    +
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LYKEM++ G   N+ T+N ++   C + +L EA ++   M+++   P++V F  +I   C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI-- 320
            V  ++  +K+FR +   S   ++ N+VT++ ++ GFC+ G+++ AEE+   M+  G+  
Sbjct: 380 MVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436

Query: 321 ---------------------------------DCNVRTYATLIDGYARGGSSEEALRLC 347
                                            D  +  Y T+I+G  +GG  E+A  L 
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             +  +G+ PN + Y   I  L  +G +  A  +L  M +    P+  TY+ L +   R+
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           G +  + KL  ++       DA S  ++I+ L     L+A K+L
Sbjct: 557 GDLTASAKLIEEMKSCGFSADASSIKMVIDML-----LSAMKRL 595


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 246/502 (49%), Gaps = 24/502 (4%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
            T   F+ ++ +C + G  E    +  ++K +    S   +N  ++   K  ++    + 
Sbjct: 272 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRF 331

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + +M   G+     +FN +I   CK+   +EA  +   ML +GI+P    +N+ I   C+
Sbjct: 332 HGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCE 391

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE-EIRYAMIKAG-ID 321
            G ++ A +L   M         P+ V++N +++G+ K+ +  F E  + +  +KAG I+
Sbjct: 392 FGRIDDARELLSSMAA-------PDVVSYNTLMHGYIKMRK--FVEASLLFDDLKAGNIN 442

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY TLIDG    G+ E A RL +EM  + + P+ + Y + +      G++  A  +
Sbjct: 443 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEI 502

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ-VLEEHMVGDAYSYNILINYLC 440
             +M+ K I PD + Y+  T G  R G  ++AF+LH + V E+H   D   YN+ I+ LC
Sbjct: 503 YDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLC 562

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K  NL  A +    +   GL+PD +TY T+I GY + G  + A  +Y+ M      P+++
Sbjct: 563 KVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVI 622

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  +I+G  K   L+ A       ++ G+  + +T+N L++G    G I EA+    +M
Sbjct: 623 TYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKM 682

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              GI+ NK  Y ILI+  C    +++  +L K M+   I PD  T+  L     K+   
Sbjct: 683 EEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD--- 739

Query: 620 EEVIELHDDMVL--SGVSPDNQ 639
                 H+ M L  SG  P+ Q
Sbjct: 740 ------HESMALDSSGKQPEQQ 755



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 173/652 (26%), Positives = 298/652 (45%), Gaps = 51/652 (7%)

Query: 42  NLRQRKWKILEQMAPSLTN-SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI 100
           N   RKW    Q    LT+  L+ RV++  R  P++A  F+ W+   +    S ++  A+
Sbjct: 103 NQPNRKWSS-HQFRLLLTDPDLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAM 161

Query: 101 VHL-----------LVNWRRFD------DALLLMGNLMSANSV----------SPLEFLE 133
           + +           LV  R  +      D LL+ GN     ++          +     E
Sbjct: 162 LEILAENDLMSEAYLVAERSINLGMHEIDDLLIDGNFDKLVALKLLDLLLWVYTKKSMAE 221

Query: 134 GLLDSYEICKATPAVFDALVRACTQI-------GATEGAYDVIQKLKVKGHSVSIHAWNN 186
             L S+E  K     F   VR C  +            A +V + + + G   ++  +N 
Sbjct: 222 KCLLSFE--KMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNT 279

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            L    K  ++ R  K++ EM       +  T+N++I    K  K+EEA   +  M +SG
Sbjct: 280 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSG 339

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
                  FN +I   C+ G  + A  +  +M + +G  + P + T+N  I   C+ GR++
Sbjct: 340 FPVTPYSFNPLIEGYCKQGLFDEAWGVTDEM-LNAG--IYPTTSTYNIYIRALCEFGRID 396

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A E+  +M       +V +Y TL+ GY +     EA  L D++    + P+ V YN+ I
Sbjct: 397 DARELLSSMAAP----DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLI 452

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             L   G++EGA  +  +M  + I PD  TY+ L KG  +NG +  A ++++++L + + 
Sbjct: 453 DGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIK 512

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL-IPDIITYGTLIDGYCKGGNIEGAVQ 485
            D Y+Y        +  +   A +L   M+      PD+  Y   IDG CK GN+E A++
Sbjct: 513 PDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIE 572

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGY 543
               + +V   P+ V Y ++I G  +      A+ L     S+R+     ITY  LI+G+
Sbjct: 573 FQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSP-SVITYFVLIHGH 631

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G++ +AF   +EM+  G+  N + +N L++ +CK G   +A   +  M   GI P+ 
Sbjct: 632 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNK 691

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +YT L+++       EEV++L+ +M+   + PD  T+ A+   L  EK  E
Sbjct: 692 YSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL--EKDHE 741



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/362 (23%), Positives = 174/362 (48%), Gaps = 18/362 (4%)

Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEG------------LLDSYEICKATPAV 148
           +  L  + R DDA  L+ ++ + + VS    + G            L D  +     P++
Sbjct: 386 IRALCEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSI 445

Query: 149 --FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             ++ L+    + G  EGA  + +++  +     +  +   L   VK   +    ++Y E
Sbjct: 446 VTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDE 505

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMIINEACQVG 265
           M+  G   +   +        +    E+A  L+  M+ +    P++  +N+ I+  C+VG
Sbjct: 506 MLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVG 565

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           +LE A++  RK+  +    ++P+ VT+  +I G+ + GR + A ++   M+   +  +V 
Sbjct: 566 NLEKAIEFQRKIFRVG---LVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVI 622

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  LI G+A+ G  E+A +   EM KRG+ PN + +N+ +H +   G+++ A   L  M
Sbjct: 623 TYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKM 682

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            ++ I P+ ++Y+IL    C     ++  KL+ ++L++ +  D Y++  L  +L K +  
Sbjct: 683 EEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 742

Query: 446 AA 447
            A
Sbjct: 743 MA 744


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 239/485 (49%), Gaps = 23/485 (4%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  L+ + K+        L  +M S G   N+ T +++I + C   ++  A S+  ++L
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P+   F  +I   C  G +  AL LF KM    G+   P+ VT+  +ING CK+G
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKM---IGEGFRPDVVTYGTLINGLCKVG 180

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
               A  +  +M++     NV  Y T+ID   +     EA  L  EMV +G+ P+   YN
Sbjct: 181 NTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 240

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S IH L    + +    +L++M+D  I PD  +++ +   LC+ G V +A  + +++++ 
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  +  +Y  L++  C  + +  A ++  +M+ +G +P++I+Y TLI+GYCK   I+ A
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360

Query: 484 VQ---------VYENMKKVEK----------KPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +           Y NM +  K           PN++ YN++ING CK   +D A  L   
Sbjct: 361 IHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 420

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             R  L+ D +TY+TLI+G     ++ +A A+F EM       N V Y IL+++LCK   
Sbjct: 421 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRY 480

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A  L+K +    + PD       +    +    E   +L  ++   G+ PD  TY+ 
Sbjct: 481 LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSI 540

Query: 644 IISPL 648
           +I+ L
Sbjct: 541 MINGL 545



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 232/465 (49%), Gaps = 23/465 (4%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+    ++G T  A  ++  +  K    ++ A+N  +  L K  ++   + L+ EM
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G   ++ T+N +I+ALC  C+ +   +L   M+ S I P+VV FN +++  C+ G +
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +  KM +  G  V PN VT+  +++G C L  ++ A ++   M+  G   NV +Y
Sbjct: 288 TEAHDVVDKM-IQRG--VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 328 ATLIDGYARGG-------------------SSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            TLI+GY +                     + +EA+++ D MV +G MPN + YN+ I+ 
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
                 ++ A+++  +M  + + PD  TYS L  GLC    ++ A  L ++++    + +
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +Y IL++YLCK+  LA A  LL ++    L PDI      IDG C+ G +E A  ++ 
Sbjct: 465 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 524

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFING 547
           N+     +P++  Y+ +INGLC+   LD A  L +     G  L+   YNT+  G+  N 
Sbjct: 525 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 584

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + + A  +  EM   G + +     + +  L   G  Q  +++++
Sbjct: 585 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 237/496 (47%), Gaps = 24/496 (4%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           Q L +  H +S+ + N F S  +  N I      +  M+      +   FN ++ ++ K 
Sbjct: 16  QMLSLLPHFLSL-SHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM 74

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
                 LSL ++M   GI PN+   +++IN  C +  + FA  +  K+  +      P++
Sbjct: 75  KHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQ---PDT 131

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T   +I G C  G++  A  +   MI  G   +V TY TLI+G  + G++  A+RL   
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MV++   PN   YN+ I  L  +  V  A  + S+M+ K I PD FTY+ L   LC    
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            K    L N++++  ++ D  S+N +++ LCK   +  A  ++  MI RG+ P+++TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS--------- 520
           L+DG+C    ++ AV+V++ M      PN++ YN++ING CK   +D A           
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC 371

Query: 521 -LLQASQRIGLLDA----------ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
             L   + + + D           I+YNTLINGY    +I +A  +F EM    +  + V
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y+ LI+ LC     Q A  L   M+    IP+ VTY  L+    KN    E + L   +
Sbjct: 432 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 491

Query: 630 VLSGVSPDNQTYNAII 645
             S + PD Q  N  I
Sbjct: 492 EGSNLDPDIQVNNIAI 507



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 242/503 (48%), Gaps = 20/503 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  L+R     G    A  +  K+  +G    +  +   ++ L K+       +L   
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV      NV  +N +I +LCK+ ++ EA +L+  M+  GI P++  +N +I+  C + +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    L  +   M    ++P+ V+ N +++  CK G+V  A ++   MI+ G++ NV T
Sbjct: 252 WKHVATLLNE---MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DG+      +EA+++ D MV +G MPN + YN+ I+            +     I
Sbjct: 309 YTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING-----------YCKIQRI 357

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           DK I      Y+ L    C    + +A K+ + ++ +  + +  SYN LIN  CK   + 
Sbjct: 358 DKAI-----HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 412

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L   M  + LIPD +TY TLI G C    ++ A+ ++  M    + PNLV Y  ++
Sbjct: 413 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 472

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTL-INGYFINGKIAEAFAMFSEMRNVGIA 565
           + LCK+  L  A +LL+A +   L   I  N + I+G    G++  A  +FS + + G+ 
Sbjct: 473 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 532

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   Y+I+IN LC+ G   +A +L + M  +G   +   Y T+   F +N      I+L
Sbjct: 533 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 592

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
             +MV  G S D  T    +  L
Sbjct: 593 LQEMVARGFSADASTMTLFVKML 615



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 213/428 (49%), Gaps = 20/428 (4%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++ A+S + RML+    P+ V FN ++    ++      L L  +M       + PN  T
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFG---IPPNIYT 98

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            + +IN FC L RV FA  +   ++K G   +  T+ TLI G    G   EAL L D+M+
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G  P+ V Y + I+ L   G+   A+ +L  M+ K+  P+ F Y+ +   LC++  V 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF L ++++ + +  D ++YN LI+ LC          LL+ M+   ++PD++++ T++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D  CK G +  A  V + M +   +PN+V Y ++++G C  + +D A  +       G +
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + I+YNTLINGY    +I +A                + Y  L++  C +    +A ++
Sbjct: 339 PNVISYNTLINGYCKIQRIDKA----------------IHYTXLMDXXCCYLNMDEAVKV 382

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              M+  G +P+ ++Y TL+  + K    ++ + L  +M    + PD  TY+ +I  L  
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 442

Query: 651 EKSAEDQV 658
            +  +D +
Sbjct: 443 VERLQDAI 450



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 176/376 (46%), Gaps = 24/376 (6%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LL+     K  P V  F+ +V A  + G    A+DV+ K+  +G   ++  +   +    
Sbjct: 258 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC 317

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK----------------EC---KLE 233
            L+E+    K++  MV  G + NV ++N +I   CK                 C    ++
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMD 377

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA+ ++  M+  G  PNV+ +N +IN  C++  ++ A+ LF   G M    ++P++VT++
Sbjct: 378 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF---GEMCRQELIPDTVTYS 434

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I+G C + R++ A  + + M+      N+ TY  L+D   +     EA+ L   +   
Sbjct: 435 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 494

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
            L P+  V N  I  +   G++E A  + S++  K + PD +TYSI+  GLCR G + +A
Sbjct: 495 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 554

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            KL  ++ E     +   YN +     ++N  + A QLL  M+ RG   D  T    +  
Sbjct: 555 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 614

Query: 474 YCKGGNIEGAVQVYEN 489
               G  +   Q+  N
Sbjct: 615 LSDDGLDQSLKQILRN 630


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 235/467 (50%), Gaps = 4/467 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  ++ F S + +  +        K++   G   N+ T N++I   C+ CK   A S+ 
Sbjct: 77  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 136

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +++K G  P+   FN +I      G +  A+ L  +M V +G    P+ VT+N I+NG 
Sbjct: 137 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENG--CQPDVVTYNSIVNGI 193

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C+ G    A ++   M +  +  +V TY+T+ID   R G  + A+ L  EM  +G+  + 
Sbjct: 194 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 253

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V YNS +  L   G       +L DM+ + I P+  T+++L     + G +++A +L+ +
Sbjct: 254 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 313

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++   +  +  +YN L++  C  N L+ A  +L  M+     PDI+T+ +LI GYC    
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 373

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++  ++V+ N+ K     N V Y+ ++ G C+   +  A+ L Q     G+L D +TY  
Sbjct: 374 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 433

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G   NGK+ +A  +F +++   + +  V Y  +I  +CK G  + A  L   +   G
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           + P+ +TYT +++   K  S  E   L   M   G +P++ TYN +I
Sbjct: 494 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 219/429 (51%), Gaps = 4/429 (0%)

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           + K ++A++L+  M++S   P++V F+   +   +       L   +++ +   + +  N
Sbjct: 56  DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL---NGIAHN 112

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T N +IN FC+  +  FA  +   ++K G + +  T+ TLI G    G   EA+ L D
Sbjct: 113 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 172

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            MV+ G  P+ V YNS ++ +   GD   AL +L  M ++++  D FTYS +   LCR+G
Sbjct: 173 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 232

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           C+  A  L  ++  + +     +YN L+  LCK+        LL  M+ R ++P++IT+ 
Sbjct: 233 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 292

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            L+D + K G ++ A ++Y+ M      PN++ YN++++G C    L  A ++L    R 
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
               D +T+ +LI GY +  ++ +   +F  +   G+  N V Y+IL+   C+ G  + A
Sbjct: 353 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            EL + M+ HG++PD +TY  L+     N   E+ +E+ +D+  S +      Y  II  
Sbjct: 413 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 472

Query: 648 LLGEKSAED 656
           +      ED
Sbjct: 473 MCKGGKVED 481



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 239/515 (46%), Gaps = 66/515 (12%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D  ++L++ G + +I+  N  ++   +  +    + +  +++  GY  +  TFN +I  L
Sbjct: 99  DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL 158

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
             E K+ EA+ L  RM+++G  P+VV +N I+N  C+ GD   AL L RKM         
Sbjct: 159 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 218

Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
                                    M    +  + VT+N ++ G CK G+      +   
Sbjct: 219 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 278

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+   I  NV T+  L+D + + G  +EA  L  EM+ RG+ PN + YN+ +     +  
Sbjct: 279 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 338

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  +L  M+     PD  T++ L KG C    V    K+   + +  +V +A +Y+I
Sbjct: 339 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 398

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+   C+S  +  A++L   M+  G++PD++TYG L+DG C  G +E A++++E+++K +
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
               +V+Y +II G+CK                                   GK+ +A+ 
Sbjct: 459 MDLGIVMYTTIIEGMCK----------------------------------GGKVEDAWN 484

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F  +   G+  N + Y ++I+ LCK G   +A  L++ M   G  P+  TY TL+    
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++       +L ++M   G S D  +   +I  LL
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 579



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 217/433 (50%), Gaps = 4/433 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F+ L++     G    A  ++ ++   G    +  +N+ ++ + +  +      L ++
Sbjct: 149 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 208

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V T++ +I +LC++  ++ A+SL+  M   GI  +VV +N ++   C+ G 
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
                 L +    M    ++PN +T N +++ F K G+++ A E+   MI  GI  N+ T
Sbjct: 269 WNDGALLLKD---MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 325

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY       EA  + D MV+    P+ V + S I        V+  + V  ++ 
Sbjct: 326 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 385

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + +  +  TYSIL +G C++G +K A +L  +++   ++ D  +Y IL++ LC +  L 
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 445

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++   +    +   I+ Y T+I+G CKGG +E A  ++ ++     KPN++ Y  +I
Sbjct: 446 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 505

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK  SL  A  LL+  +  G   +  TYNTLI  +  +G +  +  +  EM++ G +
Sbjct: 506 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 565

Query: 566 VNKVGYNILINFL 578
            +     ++I+ L
Sbjct: 566 ADASSIKMVIDML 578



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 202/401 (50%), Gaps = 4/401 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++++V    + G T  A D+++K++ +     +  ++  +  L +   I    
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   +V T+N ++  LCK  K  +   L   M+   I PNV+ FN++++  
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L+ A +L+++M +  G  + PN +T+N +++G+C   R+  A  +   M++    
Sbjct: 299 VKEGKLQEANELYKEM-ITRG--ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ T+ +LI GY      ++ +++   + KRGL+ N V Y+  +      G ++ A  +
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + PD  TY IL  GLC NG +++A ++   + +  M      Y  +I  +CK
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 475

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  L  S+  +G+ P+++TY  +I G CK G++  A  +   M++    PN   
Sbjct: 476 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 535

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           YN++I    +D  L A+  L++  +  G   DA +   +I+
Sbjct: 536 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 1/288 (0%)

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           NV +   +     +   + A+ +  +MI     P    +S     + R            
Sbjct: 43  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 102

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           Q+    +  + Y+ NI+IN  C+      A  +L  ++  G  PD  T+ TLI G    G
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYN 537
            +  AV + + M +   +P++V YNSI+NG+C+      A  LL+   +R    D  TY+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T+I+    +G I  A ++F EM   GI  + V YN L+  LCK G +     L+K M+  
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            I+P+ +T+  L+  F K    +E  EL+ +M+  G+SP+  TYN ++
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 330



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 122/564 (21%), Positives = 237/564 (42%), Gaps = 83/564 (14%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K++   +++LVR   + G       +++ +  +    ++  +N  L   VK  ++    +
Sbjct: 250 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LYKEM++ G   N+ T+N ++   C + +L EA ++   M+++   P++V F  +I   C
Sbjct: 310 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 369

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI-- 320
            V  ++  +K+FR +   S   ++ N+VT++ ++ GFC+ G+++ AEE+   M+  G+  
Sbjct: 370 MVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 426

Query: 321 ---------------------------------DCNVRTYATLIDGYARGGSSEEALRLC 347
                                            D  +  Y T+I+G  +GG  E+A  L 
Sbjct: 427 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 486

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             +  +G+ PN + Y   I  L  +G +  A  +L  M +    P+  TY+ L +   R+
Sbjct: 487 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 546

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYL-----------CKSNNLAAAKQL----- 451
           G +  + KL  ++       DA S  ++I+ L           C S    + + L     
Sbjct: 547 GDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSG 606

Query: 452 -----LSSMIVRGLIP-DIITYGTLIDGY-CKGGNIEGAVQVYENMKKVEKKP------- 497
                LSS+    + P + IT    ++    +G N   + ++  +++K+ +         
Sbjct: 607 SEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMN---SAELNRDLRKLRRSSVLKKFKN 663

Query: 498 ---NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGK---IAE 551
               +++ N ++    +DA  D    L   +      DA+ Y          G+   +  
Sbjct: 664 RDVRVLVTNELLTWGLEDAECDLMVDLELPT------DAVHYAHRAGRMRRPGRKMTVVT 717

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +  EM   GIA N + Y+ LI+  CK     +A +++ +M+  G          L+ 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMR 777

Query: 612 RFSKNCSPEEVIELHDDMVLSGVS 635
           +  K    E    L DD+  S  S
Sbjct: 778 KKRKGSETEGWENLPDDLSCSTAS 801


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 232/435 (53%), Gaps = 10/435 (2%)

Query: 143  KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
            +  P++ D   R  T I A    +D++     K++  G S  ++++   +    + +   
Sbjct: 610  RPIPSIVD-FTRVLTAI-AKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFS 667

Query: 199  RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
                L  +M+  G+  ++ T   ++   C+  + +EA+SL   M + G+ PNVV +N +I
Sbjct: 668  LALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVI 727

Query: 259  NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
            N  C+  DL  AL++F  M       ++ ++VT+N +I+G C  GR   A  +   M+K 
Sbjct: 728  NGLCKNRDLNNALEIFYGM---EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR 784

Query: 319  GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
             ID NV  +  LID + + G+  EA  L  EM++R + PN + YNS I+    +G +  A
Sbjct: 785  KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844

Query: 379  LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
              +   M+ K   PD  TY+ L  G C++  V+   KL  ++  + +VGDA++YN LI+ 
Sbjct: 845  KHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHG 904

Query: 439  LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
             C++  L  A+++ + M+  G+ PDI+TY  L+D  C  G IE A+ + E+++K +   +
Sbjct: 905  YCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVD 964

Query: 499  LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
            ++ YN II G+C++  +  A  L ++  R G+ LDAI Y T+I+G   NG   EA  + +
Sbjct: 965  IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCT 1024

Query: 558  EMRNVGIAVNKVGYN 572
             M+  G   ++  Y+
Sbjct: 1025 RMKEDGFMPSERIYD 1039



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 253/514 (49%), Gaps = 22/514 (4%)

Query: 146 PAVFDALVRACTQIGATEGAYDVI---QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           P+V D   R  T I        VI   Q++++ G S  ++++   +    + + +     
Sbjct: 63  PSVVD-FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALS 121

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +  +M+  GY  ++ TF  +++  C   ++ +A SL   M+KSG  PNVV +N +I+  C
Sbjct: 122 ILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLC 181

Query: 263 QVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           + GD+  AL+L  +M   G ++ D V     T+N ++ G C  G    A  I   M K  
Sbjct: 182 KNGDVNIALELLNEMEKKGRLAADLV-----TYNTLLTGLCYSGEWRQAARILRDMTKRR 236

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I+ +V T+  LID + + G+ +EA  L  +M++  + PN V YNS I+ L   G +  A 
Sbjct: 237 INPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAK 296

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M  K   P+  TY+ L  G C++  V+   KL  ++  E +VGD ++YN LI+  
Sbjct: 297 KTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGY 356

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C+   L  AK + S M+  G+ PDIIT+  L+ G C  G I  A+  + +M+  EK   +
Sbjct: 357 CQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGI 416

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN +I+GLCK   ++ A  L       G+  DA TY  +I G   NG   EA  +F  
Sbjct: 417 VAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRR 476

Query: 559 MRNVGIA-------VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV- 610
           M+  GI        + + G N  ++      C ++ R +M+   L+    D   +++LV 
Sbjct: 477 MKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVG 536

Query: 611 -TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
               + + S +  +  H  ++  G +P++++++ 
Sbjct: 537 LIPIASSSSVKGFVRRHLLLLERGNNPESRSFSG 570



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 213/419 (50%), Gaps = 4/419 (0%)

Query: 231  KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
            K ++A  L+  ML+S   P++V F  ++    ++   +  + LF KM  +    +  +  
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLG---ISHDLY 651

Query: 291  THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +   +I+ FC+  R   A  +   M+K G   ++ T  +L++G+ +G   +EA+ L D M
Sbjct: 652  SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711

Query: 351  VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
             + GL PN V+YN+ I+ L    D+  AL +   M  K I  D  TY+ L  GLC +G  
Sbjct: 712  AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771

Query: 411  KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
              A +L   +++  +  +   +  LI+   K  NL  AK L   MI R + P+I+TY +L
Sbjct: 772  TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831

Query: 471  IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
            I+G+C  G +  A  +++ M      P++V YN++I G CK   ++    L       GL
Sbjct: 832  INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891

Query: 531  L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
            + DA TYNTLI+GY   GK+  A  +F+ M + G+  + V YNIL++ LC  G  ++A  
Sbjct: 892  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951

Query: 590  LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +++ +  + +  D +TY  ++    +N   +E   L   +   GV  D   Y  +IS L
Sbjct: 952  MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 229/467 (49%), Gaps = 7/467 (1%)

Query: 190  HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            H +K ++    + L+ EM+    + ++  F  V+ A+ K  K +  + L+++M   GI  
Sbjct: 592  HCIKFDDA---FGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISH 648

Query: 250  NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
            ++  F ++I+  C+      AL L  KM  +      P+ VT   ++NGFC+  R + A 
Sbjct: 649  DLYSFTILIHCFCRCSRFSLALALLGKMMKLG---FQPSIVTLGSLLNGFCQGNRFQEAV 705

Query: 310  EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
             +  +M + G++ NV  Y T+I+G  +      AL +   M K+G++ + V YN+ I  L
Sbjct: 706  SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765

Query: 370  FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
               G    A  +L DM+ + I P+   ++ L     + G + +A  L+ +++   +  + 
Sbjct: 766  CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNI 825

Query: 430  YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             +YN LIN  C    L  AK +   M+ +G  PD++TY TLI G+CK   +E  ++++  
Sbjct: 826  LTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 885

Query: 490  MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
            M       +   YN++I+G C+   L+ A+ +       G+  D +TYN L++    NGK
Sbjct: 886  MTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGK 945

Query: 549  IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
            I +A  M  +++   + V+ + YNI+I  +C+    ++A  L + +   G+  D + Y T
Sbjct: 946  IEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYIT 1005

Query: 609  LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +++   +N    E  +L   M   G  P  + Y+  +       SAE
Sbjct: 1006 MISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTSLSAE 1052



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 224/465 (48%), Gaps = 21/465 (4%)

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
            R +  Y+E +  G++ ++              + E+AL L+  M++S   P+VV F  +
Sbjct: 26  ARAYSGYREKLRTGFLHSI--------------RFEDALDLFLEMVQSQPLPSVVDFTRL 71

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           +     +   E  +   ++M +     +  +  +   +I+ FC+  R+  A  I   M+K
Sbjct: 72  LTAIANLRRYETVIYFSQQMELFG---ISHDLYSFTILIHCFCRCSRLSLALSILGKMMK 128

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G D ++ T+ +L+ G+       +A  L   MVK G  PN VVYN+ I  L   GDV  
Sbjct: 129 LGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNI 188

Query: 378 ALFVLSDMIDK-HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
           AL +L++M  K  +  D  TY+ L  GLC +G  +QA ++   + +  +  D +++  LI
Sbjct: 189 ALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALI 248

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +   K  NL  A++L   M+   + P+ +TY +LI+G C  G +  A + ++ M      
Sbjct: 249 DAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCF 308

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAM 555
           PN+V YN++ING CK   ++    L Q   R GL+ D  TYNTLI+GY   GK+  A  +
Sbjct: 309 PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDI 368

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           FS M + G+  + + + IL++ LC  G    A      M         V Y  ++    K
Sbjct: 369 FSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCK 428

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
               EE  EL   + + GV PD +TY  +I  L   G +   D++
Sbjct: 429 ADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 473



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 214/452 (47%), Gaps = 23/452 (5%)

Query: 56   PSLTNSLVNRVVSEFRKSPKLALEFYTWVG-ENNRFSHSLESSCAIVHLLVNWRRFDDAL 114
            PS+ +    RV++   K  K  +  Y +   EN   SH L S   ++H      RF  AL
Sbjct: 613  PSIVD--FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLAL 670

Query: 115  LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
             L+G +M       +  L  LL+ +                  Q    + A  ++  +  
Sbjct: 671  ALLGKMMKLGFQPSIVTLGSLLNGF-----------------CQGNRFQEAVSLVDSMAE 713

Query: 175  KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
             G   ++  +N  ++ L K  ++    +++  M   G V +  T+N +I  LC   +  +
Sbjct: 714  LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 235  ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
            A  L   M+K  I PNV+ F  +I+   + G+L  A  L+++M      SV PN +T+N 
Sbjct: 774  AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM---IRRSVHPNILTYNS 830

Query: 295  IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            +INGFC  GR+  A+ +   M+  G   +V TY TLI G+ +    E+ ++L  EM  +G
Sbjct: 831  LINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890

Query: 355  LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
            L+ +   YN+ IH     G +  A  V + M+D  + PD  TY+IL   LC NG +++A 
Sbjct: 891  LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKAL 950

Query: 415  KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
             +   + +  M  D  +YNI+I  +C+++ +  A  L  S+  +G+  D I Y T+I G 
Sbjct: 951  VMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010

Query: 475  CKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            C+ G    A ++   MK+    P+  IY+  +
Sbjct: 1011 CRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 249/540 (46%), Gaps = 40/540 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+    Q+G    A D+   +   G +  I      L  L    EIG     + +M
Sbjct: 348 TYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S      +  +N++I+ LCK  K+EEA  L+ R+   G+ P+   + ++I   C+ G  
Sbjct: 408 RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 467

Query: 268 EFALKLFRKM---GVM--SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--- 319
             A +LFR+M   G++  + D  L    T+N +      LG +    + R +++++G   
Sbjct: 468 READELFRRMKEDGIICQAEDGHLGEHGTNNQV-----SLGTIIICPKRRRSIMESGDLY 522

Query: 320 ---IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN------------- 363
               D  + +    +   A   S +  +R    +++RG  P +  ++             
Sbjct: 523 YYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHH 582

Query: 364 ------STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
                 S +H +      + A  +  +M+     P    ++ +   + +         L 
Sbjct: 583 YRERLRSELHCI----KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLF 638

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++    +  D YS+ ILI+  C+ +  + A  LL  M+  G  P I+T G+L++G+C+G
Sbjct: 639 HKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQG 698

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
              + AV + ++M ++  +PN+VIYN++INGLCK+  L+ A  +    ++ G++ DA+TY
Sbjct: 699 NRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTY 758

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTLI+G   +G+  +A  +  +M    I  N + +  LI+   K G   +A+ L K MI 
Sbjct: 759 NTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIR 818

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             + P+ +TY +L+  F       +   + D MV  G  PD  TYN +I+     K  ED
Sbjct: 819 RSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 878



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 181/390 (46%), Gaps = 22/390 (5%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL----------DSYE 140
           SH L S   ++H      R   AL ++G +M       +     LL          D++ 
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 141 IC--------KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHL 191
           +         +    V++ L+    + G    A +++ +++ KG  +  +  +N  L+ L
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
               E  +  ++ ++M       +V TF  +I A  K+  L+EA  LY +ML+S I PN 
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           V +N +IN  C  G L  A K F    +M+     PN VT+N +INGFCK  RVE   ++
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTF---DLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M + G+  +  TY TLI GY + G    A  +   MV  G+ P+ + +   +H L  
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCV 393

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G++  A+   +DM           Y+I+  GLC+   V++A++L  ++  E +  DA +
Sbjct: 394 NGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDART 453

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           Y I+I  LCK+     A +L   M   G+I
Sbjct: 454 YTIMILGLCKNGPRREADELFRRMKEDGII 483


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/419 (32%), Positives = 213/419 (50%), Gaps = 18/419 (4%)

Query: 242 MLKSGIWPNVVCFNMIIN---EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           M ++G  PN V FN ++N   +  + GD E      R +  M+   + PN V++N ++ G
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCE------RLLETMAARDIQPNVVSYNGLLEG 54

Query: 299 FCKLGRVEFAEEIRYAMIKAG--IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            CKL R   AEE+   MI  G     ++ TY+TL+ GY + G  EE+  L  E++ RGL 
Sbjct: 55  LCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLR 114

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ ++Y   +  L     +  AL +L +MI    CP   T++ L  G CR   ++ A  L
Sbjct: 115 PDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++    +  D  +YN L++ LCK+  L  A+QLL  M   G  PD++ Y + + G CK
Sbjct: 175 LQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAI 534
            G +  A QV E M+     PN+V YN+I++GLCK   +D A  +++  AS     L+ +
Sbjct: 235 SGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y+T+++G    G+  EA ++   M   G   + V Y+ L+N LCK G  ++A E ++ M
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM-----VLSGVSPDNQTYNAIISPL 648
            + G  P+ VTY +LV          E   + ++M           P   TYNA+I  L
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGL 413



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 227/464 (48%), Gaps = 17/464 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ALV   ++ G       +++ +  +    ++ ++N  L  L KL       
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 202 KLYKEMVSCG--YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
           +L ++M+S G     ++ T++ ++   CK  K+EE+  L   ++  G+ P+ + +  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+   L  AL+L  +M + +G    P  +T N +I+G C+   +E A+ +   M  +G
Sbjct: 126 SLCKSARLGEALELLEEM-IRAG--CCPTLITFNTLISGCCREKNLEMADSLLQKMAASG 182

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V TY TL+DG  + G  +EA +L + M   G  P+ V Y+S ++ L   G V  A 
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAH 242

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-DAYSYNILINY 438
            VL  M D H  P+  TY+ +  GLC++G +  A ++  Q+      G +   Y+ +++ 
Sbjct: 243 QVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LCK      A+ ++ +M   G  PD++TY +L++G CK G IE AV+    M     KPN
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI------TYNTLINGYFINGKIAEA 552
            V Y S+++GLC    L  A+ +++     G           TYN LI G    G+I +A
Sbjct: 363 AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDA 422

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
              F  MR+ G   + V Y+ ++  L + G     R L   MIL
Sbjct: 423 LKFFQRMRSQGCDPDGVSYSTIVEGLARSG-----RALQAEMIL 461



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 181/376 (48%), Gaps = 39/376 (10%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PNSVT N ++NGF K GR    E +   M    I  NV +Y  L++G  +     EA  L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 347 CDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
             +M+ RG    P+ V Y++ +      G VE +  +L ++I + + PD   Y+ +   L
Sbjct: 68  VRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASL 127

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C++  + +A +L  +++         ++N LI+  C+  NL  A  LL  M   G+  D+
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADV 187

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDAAKSLLQ 523
           +TY TL+DG CK G ++ A Q+ E MK     P++V Y+S + GLCK    LDA + L Q
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQ 247

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV-GIAVNKVGYNILINFLCKFG 582
                   + +TYNT+++G   +GKI  A  M  +M +  G  +N VGY+ +++ LCK G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             Q+AR +M+                                    M  +G  PD  TY+
Sbjct: 308 RTQEARSVMEA-----------------------------------MARAGCRPDVVTYS 332

Query: 643 AIISPLLGEKSAEDQV 658
           ++++ L      E+ V
Sbjct: 333 SLVNGLCKAGKIEEAV 348



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 7/317 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   F+ L+  C +    E A  ++QK+   G    +  +N  +  L K   +    
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L + M + G   +V  ++  +Y LCK  K+ +A  +  +M  S   PNVV +N I++  
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGL 267

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G ++ AL++  +M   S D    N V ++ +++G CKLGR + A  +  AM +AG  
Sbjct: 268 CKSGKIDTALEMMEQMA--SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR 325

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY++L++G  + G  EEA+    EM   G  PN V Y S +H L + G +  A  +
Sbjct: 326 PDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERM 385

Query: 382 LSDM----IDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
           + +M       H CP    TY+ L  GLC+ G +  A K   ++  +    D  SY+ ++
Sbjct: 386 VEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIV 445

Query: 437 NYLCKSNNLAAAKQLLS 453
             L +S     A+ +LS
Sbjct: 446 EGLARSGRALQAEMILS 462


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 242/506 (47%), Gaps = 26/506 (5%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A+ + F ALV A +  G    A     ++       +   +N  L  LV    I     L
Sbjct: 135 ASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y  MV+ G   N  T+N+++  LCK+    +AL ++  ML  GI PNV  + ++++  C 
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ A++L   +G M     LP+ VT+N  ++G CK+GRV  A +    +   G    
Sbjct: 255 AGKIDEAVQL---LGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           ++ Y+ LIDG  +    +E       M++R + P+ V+Y   I      G +E AL  L 
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  K   PD F Y+ + K LC +G +++A  L +++L+ ++V D+ +  I+I  LCK  
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A Q+   M   G  P ++TY  LIDG+ + G +E A  ++  M+ +   P+L +  
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFLRL 490

Query: 504 SI-INGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++  N +C   SL                       L++    +G++ +A+ +   + + 
Sbjct: 491 TLGANQVCDSESL---------------------RKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  + V YN LIN LCK      A  L K + L GI PD +TY TL+    +     + 
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
           + L  +++ SG SP    YN+++  L
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 212/475 (44%), Gaps = 62/475 (13%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++A +    ++G    A+  +  L+  G ++ +  ++  +  L +       +
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             YK M+      +V  + ++I    +  ++E+ALS    M K G  P+  C+N ++   
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  GDLE A  L  +M  +  + VL +S T   +I G CK G V+ A +I   M + G D
Sbjct: 393 CDHGDLERAHTLRSEM--LQNNLVL-DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             V TY  LIDG+ R G  EEA  L  +M     M NN                  +LF+
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKME----MGNN-----------------PSLFL 488

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              +    +C D  +   L   +C++G V +A+KL   +++  +V D  +YN LIN LCK
Sbjct: 489 RLTLGANQVC-DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCK 547

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + NL  A +L   + ++G+ PD ITYGTLIDG  +      A+ +++N+ +    P+L I
Sbjct: 548 ARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSI 607

Query: 502 YNSIINGLCK------------------------------------DASL-DAAKSLLQA 524
           YNS++  LC+                                    D SL D  + L++ 
Sbjct: 608 YNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKI 667

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            Q  G + +  Y   + G     +  +A  +F  ++  GI +      +LIN+LC
Sbjct: 668 DQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 224/470 (47%), Gaps = 53/470 (11%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           +D ++  + T  V++ +++A    G    A  +  ++   G + +   +N  +  L K  
Sbjct: 163 MDEFQ-SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQG 221

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
             G   K++ EM+  G + NV  + +++ +LC   K++EA+ L   M   G  P+ V +N
Sbjct: 222 MAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYN 281

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
             ++  C+VG +  A   F+++ ++           ++C+I+G  +  R +        M
Sbjct: 282 AFLSGLCKVGRVNEA---FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++  I  +V  Y  +I G A  G  E+AL   D M K+G +P+   YN+ +  L   GD+
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--------------- 420
           E A  + S+M+  ++  D  T +I+  GLC+ G V +A ++ +++               
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNAL 458

Query: 421 ---------LEE------------------------HMVGDAYSYNILINYLCKSNNLAA 447
                    LEE                        + V D+ S   L++ +C+S  +  
Sbjct: 459 IDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLK 518

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL S+I  G++PD++TY TLI+G CK  N++GAV++++ ++     P+ + Y ++I+
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMF 556
           GL +    + A  L Q   + G   +++ YN+++       K+++A  ++
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 161/343 (46%), Gaps = 7/343 (2%)

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           AG+  +   +A L+  ++  G   +A++    M +    P   VYN+ +  L   G +  
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILL 190

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL + + M+     P+  TY++L  GLC+ G    A K+ +++L+  ++ +   Y +L++
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC +  +  A QLL SM  +G +PD +TY   + G CK G +  A Q    ++      
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL 310

Query: 498 NLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
            L  Y+ +I+GL +    D      K++L   +R    D + Y  +I G    G+I +A 
Sbjct: 311 GLKGYSCLIDGLFQARRFDEGFGYYKTML---ERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
           +    M+  G   +   YN ++  LC  G  ++A  L   M+ + ++ D  T T ++   
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            K    +E +++ D+M   G  P   TYNA+I     E   E+
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEE 470



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/457 (21%), Positives = 172/457 (37%), Gaps = 98/457 (21%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           ++  F+  L+    ++  L   RRFD+       ++  N +SP                 
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN-ISP----------------D 346

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             ++  ++R C + G  E A   +  +K KG       +N  L  L    ++ R   L  
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM+    V +  T  ++I  LCK   ++EA+ ++  M + G  P V+ +N +I+   + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 266 DLEFALKLFRKMGVMSGDS----------------------------------------- 284
            LE A  LF KM + +  S                                         
Sbjct: 467 RLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSI 526

Query: 285 ----VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
               V+P+ VT+N +ING CK   ++ A  +   +   GI  +  TY TLIDG  R    
Sbjct: 527 IDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRE 586

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIH--------------WL----------------- 369
            +A+ L   +++ G  P+  +YNS +               WL                 
Sbjct: 587 NDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLA 646

Query: 370 -----FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
                  +G ++  +  L  +  ++       Y+I   GLC+      A ++ + + E  
Sbjct: 647 NAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFG 706

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           +        +LINYLC   NL AA  ++   + + +I
Sbjct: 707 IDITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743



 Score = 45.8 bits (107), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 58/294 (19%), Positives = 117/294 (39%), Gaps = 37/294 (12%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R ++A +L   +   N+  P  FL   L + ++C +       LV    Q G    AY +
Sbjct: 467 RLEEARMLFHKMEMGNN--PSLFLRLTLGANQVCDSES--LRKLVHDMCQSGQVLKAYKL 522

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           ++ +   G    +  +N  ++ L K   +    +L+KE+   G   +  T+  +I  L +
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF-----RKMGVMSGD 283
             +  +A+ L+  +L+SG  P++  +N ++   C++  L  A+ L+     +K       
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVES 642

Query: 284 SVLPN----------------------------SVTHNCIINGFCKLGRVEFAEEIRYAM 315
            VL N                            S  +   + G C++ R + A  I + +
Sbjct: 643 EVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTL 702

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            + GID      A LI+      +   A+ +    + + ++ +  V N  + WL
Sbjct: 703 QEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWL 756



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 7/137 (5%)

Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           DA  DA  + L AS          +  L+  +   G+ A+A   FS M           Y
Sbjct: 123 DALADARAAGLPASSS-------AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N ++  L   G    A  L   M+  G  P+  TY  L+    K     + +++ D+M+ 
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 632 SGVSPDNQTYNAIISPL 648
            G+ P+ + Y  ++S L
Sbjct: 236 RGIMPNVKIYTVLLSSL 252


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 262/563 (46%), Gaps = 38/563 (6%)

Query: 100  IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
            ++ LLV  RR+DDA  L   ++  +S +         D+Y  C         LVR     
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGA---------DNYSTC--------VLVRGLCLE 1160

Query: 160  GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
               E    +I+     G    +  +N  +    +  ++GR   L  EM + G++  + T+
Sbjct: 1161 RRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTY 1220

Query: 220  NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
              +I  L K+  LE+  SL+  M K G  PNV  +N +I+  C+      A+ + ++M  
Sbjct: 1221 GSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFA 1280

Query: 280  MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
               D   P+ +T N +I G C  G V  AE      I+  ++ N  +Y  LI G+   G 
Sbjct: 1281 SGCD---PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1337

Query: 340  SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
               A  L  EM+ RG  P+ V + + IH L   G V  AL V   M ++ + PD   Y++
Sbjct: 1338 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1397

Query: 400  LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
            L  GLC+   +  A  +  ++LE+++  D + Y  LI+   +S NL  A+++   M  +G
Sbjct: 1398 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 1457

Query: 460  LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA- 518
            + PDI++   +I GYC+ G +  A+    NM+KV   P+   Y ++I+G  K  +L+ A 
Sbjct: 1458 ICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1517

Query: 519  KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            + L    +R    + +TY++LINGY   G    A  +F+ M+   ++ N V Y ILI  L
Sbjct: 1518 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSL 1577

Query: 579  CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP----------------EEV 622
             K     +A    + M+L+   P+ VT   LV   + +C+P                + +
Sbjct: 1578 FKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT-SCTPCVINSICCNTSEVHGKDAL 1636

Query: 623  IELHDDMVLSGVSPDNQTYNAII 645
            + +   +V     P N  YNAII
Sbjct: 1637 LVVFKKLVFDIGDPRNSAYNAII 1659



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 226/482 (46%), Gaps = 5/482 (1%)

Query: 167  DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFNLVIYA 225
            D +Q + + G + +       ++       +G+  K+ + +    G +  V   N ++  
Sbjct: 1062 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKL 1121

Query: 226  LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
            L ++ + ++A  LY  ML      +     +++   C    +E  LKL        G   
Sbjct: 1122 LVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIE---ARWGAGC 1178

Query: 286  LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            +P+ V +N +I+G+C+ G +     +   M   G    + TY +LI+   + G  E+   
Sbjct: 1179 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGS 1238

Query: 346  LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
            L  EM KRG  PN  +YNS I  L        A+ +L  M      PD  T++ L  GLC
Sbjct: 1239 LFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1298

Query: 406  RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
              G V++A     + +   +  +  SY  LI+  C    L  A  LL  M+ RG  PD++
Sbjct: 1299 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1358

Query: 466  TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            T+G LI G    G +  A+ V E M + +  P++ IYN +I+GLCK   L AAK++L+  
Sbjct: 1359 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1418

Query: 526  -QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
             ++    D   Y TLI+G+  +  + +A  +F  M + GI  + V  N +I   C+FG  
Sbjct: 1419 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMM 1478

Query: 585  QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             +A   M  M   G IPD  TYTT+++ ++K  +    +    DM+     P+  TY+++
Sbjct: 1479 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSL 1538

Query: 645  IS 646
            I+
Sbjct: 1539 IN 1540



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 2/364 (0%)

Query: 287  PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            P  + H+ ++    +  R +  ++   +M  AG          L+  YA  G   +A ++
Sbjct: 1039 PTPLAHSALLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKM 1098

Query: 347  CDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
            C+ + ++ G +P     N  +  L  +   + A  +  +M+ K    D+++  +L +GLC
Sbjct: 1099 CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC 1158

Query: 406  RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
                V++  KL         +     YN+LI+  C+  ++     LL  M  +G +P ++
Sbjct: 1159 LERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLV 1218

Query: 466  TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            TYG+LI+   K G++E    ++  M+K    PN+ IYNS+I+ LCK  S   A  +L+  
Sbjct: 1219 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278

Query: 526  QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
               G   D IT+NTLI G    G + +A     E     +  N++ Y  LI+  C  G  
Sbjct: 1279 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1338

Query: 585  QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
              A +L+  M+  G  PD VT+  L+          E + + + M    V PD   YN +
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1398

Query: 645  ISPL 648
            IS L
Sbjct: 1399 ISGL 1402



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 167/364 (45%), Gaps = 24/364 (6%)

Query: 165  AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            A D++ ++  +GH+  +  +   +  LV   ++     + ++M       +VN +N++I 
Sbjct: 1341 ASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 1400

Query: 225  ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             LCK+  L  A ++   ML+  + P+   +  +I+   +  +L  A K+F     M    
Sbjct: 1401 GLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE---FMEHKG 1457

Query: 285  VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
            + P+ V+ N +I G+C+ G +  A      M K G   +  TY T+I GYA+ G+   AL
Sbjct: 1458 ICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1517

Query: 345  R-LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            R LCD M+KR   PN V Y+S I+     GD + A  + ++M  + + P+  TY+IL   
Sbjct: 1518 RWLCD-MIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGS 1576

Query: 404  LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL------------CKSNNLAAAKQL 451
            L +   V +A      +L  H   +  + + L+N L            C ++ +     L
Sbjct: 1577 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDAL 1636

Query: 452  LSSMIVRGLIPDI-----ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            L  ++ + L+ DI       Y  +I   C+   +  A+     M K    PN + + S++
Sbjct: 1637 L--VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1694

Query: 507  NGLC 510
             G C
Sbjct: 1695 YGFC 1698



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query: 217  NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            + +N +I++LC+   L EAL    RM K G  PN + F  ++   C VG
Sbjct: 1653 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 1701


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 208/377 (55%), Gaps = 2/377 (0%)

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           + R+MG   G +  P++ ++N +I G  + G+   A ++   M+  G+  N  TY T+ID
Sbjct: 1   MVRRMGRSEG-APPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMID 59

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ +GG  E   RL D+M+  G  PN V YN  +  L   G ++    ++ +M    + P
Sbjct: 60  GHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFP 119

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D FTYSIL  GL R G  +    L  + L++ ++  AY+ +IL+N LCK   +A A+Q+L
Sbjct: 120 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL 179

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  GL+P  + Y TLI+GYC+  ++ GA  ++E MK    +P+ + YN++INGLCK 
Sbjct: 180 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 239

Query: 513 ASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  A+ L+   ++ G+  ++ T+NTLI+ Y   G++ + F + S+M+  GI  + + +
Sbjct: 240 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 299

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             ++   CK G   +A  ++  MI   + P+   Y +++  + ++   E+   L + M  
Sbjct: 300 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 359

Query: 632 SGVSPDNQTYNAIISPL 648
           SGVS    TYN ++  L
Sbjct: 360 SGVSASIVTYNLLLKGL 376



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 222/440 (50%), Gaps = 4/440 (0%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           ++N+VI  L +  K  +AL ++  M+  G+ PN + +N +I+   + GDLE     FR  
Sbjct: 18  SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAG---FRLR 74

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M  D   PN VT+N +++G C+ GR++    +   M    +  +  TY+ L DG  R 
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G S   L L  E +K+G+M      +  ++ L  +G V  A  VL  ++   + P    Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G C+   ++ AF +  Q+   H+  D  +YN LIN LCK   +  A+ L+  M  
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G+ P + T+ TLID Y   G +E    V  +M++   K +++ + S++   CK+  +  
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A ++L       +  +A  YN++I+ Y  +G   +AF +  +M+N G++ + V YN+L+ 
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LC+     +A EL+  +   G+ PD V+Y T+++        ++ +EL  +M   G+ P
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434

Query: 637 DNQTYNAIISPLLGEKSAED 656
             +TY+ ++S L       D
Sbjct: 435 TLRTYHTLVSALASAGRVHD 454



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 232/464 (50%), Gaps = 4/464 (0%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           ++N  ++ L +  +     K++ EMV  G V N  T+N +I    K   LE    L  +M
Sbjct: 18  SYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM 77

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           L  G  PN+V +N++++  C+ G ++    L   M  M+  S+ P+  T++ + +G  + 
Sbjct: 78  LHDGPKPNIVTYNVLLSGLCRAGRMDETRVL---MDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G       +    +K G+     T + L++G  + G   +A ++ + +V  GL+P  V+Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ I+      D+ GA  +   M  +HI PDH TY+ L  GLC+   V +A  L  ++ +
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +     ++N LI+    +  L     +LS M  +G+  D+I++G+++  +CK G I  
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLIN 541
           AV + ++M   +  PN  +YNSII+   +    + A  L++  +  G+  +I TYN L+ 
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G   + +I EA  +   +RN G+  + V YN +I+  C  G   +A EL++ M  +GI P
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              TY TLV+  +      ++  L+  M+   V P +  Y  ++
Sbjct: 435 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 194/378 (51%), Gaps = 4/378 (1%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +  E      L+ E +  G +    T ++++  LCK+ K+ +A  +   ++ +G+ P 
Sbjct: 131 LTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
            V +N +IN  CQV DL  A  +F +M       + P+ +T+N +ING CKL  V  AE+
Sbjct: 191 TVIYNTLINGYCQVRDLRGAFCIFEQM---KSRHIRPDHITYNALINGLCKLEMVTKAED 247

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M K+G+D +V T+ TLID Y   G  E+   +  +M ++G+  + + + S +    
Sbjct: 248 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 307

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A+ +L DMI K + P+   Y+ +      +G  +QAF L  ++    +     
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 367

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN+L+  LC+S+ +  A++L+ ++  +GL PD+++Y T+I   C  G+ + A+++ + M
Sbjct: 368 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 427

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKI 549
            K   +P L  Y+++++ L     +   + L Q      +  + + Y  +++ Y      
Sbjct: 428 NKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEND 487

Query: 550 AEAFAMFSEMRNVGIAVN 567
           ++  ++  EM   GIA +
Sbjct: 488 SKVASLKKEMSEKGIAFD 505



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 3/319 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T  +++ L+    Q+    GA+ + +++K +        +N  ++ L KL  + +   L 
Sbjct: 190 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 249

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            EM   G   +V TFN +I A     +LE+  ++   M + GI  +V+ F  ++   C+ 
Sbjct: 250 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 309

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G +  A+ +   M       V PN+  +N II+ + + G  E A  +   M  +G+  ++
Sbjct: 310 GKIPEAVAILDDMIY---KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASI 366

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  L+ G  R    +EA  L   +  +GL P+ V YN+ I     +GD + AL +L +
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M    I P   TY  L   L   G V     L+ Q+L +++   +  Y I+++   +  N
Sbjct: 427 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 486

Query: 445 LAAAKQLLSSMIVRGLIPD 463
            +    L   M  +G+  D
Sbjct: 487 DSKVASLKKEMSEKGIAFD 505



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 150/352 (42%), Gaps = 38/352 (10%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A  V++ L   G   +   +N  ++   ++ ++   + ++++M S     +  T+
Sbjct: 170 GKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITY 229

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I  LCK   + +A  L   M KSG+ P+V  FN +I+     G LE   K F  +  
Sbjct: 230 NALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLE---KCFTVLSD 286

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    +  + ++   ++  FCK G++  A  I   MI   +  N + Y ++ID Y   G 
Sbjct: 287 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 346

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
           +E+A  L ++M   G+  + V YN                                   +
Sbjct: 347 TEQAFLLVEKMKNSGVSASIVTYN-----------------------------------L 371

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L KGLCR+  + +A +L   +  + +  D  SYN +I+  C   +   A +LL  M   G
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           + P + TY TL+      G +     +Y+ M     +P+  IY  +++   +
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 227/453 (50%), Gaps = 4/453 (0%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           N++     L+  ++          FN ++ +L K       L L  +M   GI PN+V  
Sbjct: 64  NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 123

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N++IN  CQ+G + FA  +F K+  M     +P+++T   +  G C  G+++ A      
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMG---YVPDTITFTTLSKGLCLKGQIQQAFLFHDK 180

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           ++  G   +  +Y TLI G  + G +  AL L   +    + PN V+YN+ I  +     
Sbjct: 181 VVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL 240

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V  A  + S+M+ K I PD  TYS L  G C  G +K A  L N+++ E++  D Y++NI
Sbjct: 241 VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+N  CK   +   K +   M+ +G+ P+ +TY +L+DGYC    +  A  ++  M +  
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P++  Y+ +ING CK    D A +L +   R  ++ D +TY++LI+G   +G+I+ A 
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  +M + G+  N   YN +++ LCK     +A  L+      G  PD  TY+ L+   
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            ++   E+  ++ +D+++ G + D   Y  +I 
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQ 513



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 256/525 (48%), Gaps = 21/525 (4%)

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           DDA+ L   L+  N+  P         ++E        F+ ++ +  +         + Q
Sbjct: 67  DDAVSLFNRLLRRNTTPP---------AFE--------FNKILGSLVKSKHYHTVLYLSQ 109

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K++ +G   ++   N  ++   +L  I   + ++ +++  GYV +  TF  +   LC + 
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKG 169

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++++A   + +++  G   + + +  +I+  C+VG+   AL L +++    G+ V PN V
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV---DGNLVQPNVV 226

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +N II+  CK+  V  A ++   M+  GI  +V TY+ LI G+   G  ++A+ L ++M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +   + P+   +N  ++    +G ++    V   M+ + I P+  TY+ L  G C    V
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  + N + +  +  D  SY+I+IN  CK      A  L   M  + +IPD++TY +L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDG  K G I  A+Q+ + M      PN+  YNSI++ LCK   +D A +LL   +  G 
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D  TY+ LI G   +GK+ +A  +F ++   G  ++   Y I+I   C  G + +A  
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALA 526

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           L+  M  +G IPD  TY  ++    K    +   +L  +M+  G+
Sbjct: 527 LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 206/426 (48%), Gaps = 4/426 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A+SL+ R+L+    P    FN I+    +       L L +KM       + PN V 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRG---IKPNLVN 122

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC+LG + FA  +   ++K G   +  T+ TL  G    G  ++A    D++V
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVV 182

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G   + + Y + IH L   G+   AL +L  +    + P+   Y+ +   +C+   V 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF L ++++ + +  D  +Y+ LI+  C    L  A  L + MI+  + PD+ T+  L+
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           + +CK G ++    V++ M K   KPN V YNS+++G C    ++ AKS+     + G+ 
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  +Y+ +ING+    K  EA  +F EM    I  + V Y+ LI+ L K G    A +L
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M   G+ P+  TY +++    K    ++ I L       G  PD  TY+ +I  L  
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482

Query: 651 EKSAED 656
               ED
Sbjct: 483 SGKLED 488



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 207/421 (49%), Gaps = 4/421 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L +     G  + A+    K+   G      ++   +  L K+ E      L + +
Sbjct: 157 TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  NV  +N +I ++CK   + EA  L+  M+  GI P+VV ++ +I+  C +G L
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ LF KM +   +++ P+  T N ++N FCK G+++  + +   M+K GI  N  TY
Sbjct: 277 KDAIDLFNKMIL---ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L+DGY       +A  + + M + G+ P+   Y+  I+        + A+ +  +M  
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K+I PD  TYS L  GL ++G +  A +L +Q+ +  +  +  +YN +++ LCK++ +  
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDK 453

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  LL+    +G  PDI TY  LI G C+ G +E A +V+E++       ++  Y  +I 
Sbjct: 454 AIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQ 513

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G C +   + A +LL   +  G + DA TY  +I   F   +   A  +  EM   G+ +
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPL 573

Query: 567 N 567
           N
Sbjct: 574 N 574



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 160/325 (49%), Gaps = 1/325 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  +Y++    +      ++A+ L + +++R   P    +N  +  L         L++ 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M  + I P+    +IL    C+ G +  AF +  ++L+   V D  ++  L   LC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A      ++  G   D I+YGTLI G CK G    A+ + + +     +PN+V+Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N+II+ +CK   ++ A  L       G+  D +TY+ LI+G+ I GK+ +A  +F++M  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             I  +   +NIL+N  CK G  ++ + +  +M+  GI P++VTY +L+  +       +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 622 VIELHDDMVLSGVSPDNQTYNAIIS 646
              + + M   GV+PD Q+Y+ +I+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMIN 373


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 261/528 (49%), Gaps = 4/528 (0%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E L  + +   +C      ++ ++    + G    A D+  ++  +G S  +  +N  ++
Sbjct: 200 ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVN 259

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K   + +   + ++MV  G + +  T+N +IY      + +EA+ +  +M   GI P
Sbjct: 260 ALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILP 319

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +VV  N ++   C+ G ++ A  +F  M  M G     +  ++  ++NG+   G +    
Sbjct: 320 DVVTLNSLMASLCKHGKIKDARDVFDSMA-MKGQKT--DIFSYKIMLNGYATKGCLVDLT 376

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E+   M+  GI  +   +  LI  YA+ G  + A  + +EM ++G+ P+ V Y++ I  L
Sbjct: 377 ELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAAL 436

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G ++ A+   + MID+ + P   TY  L +G C +G + +A  L  Q++ + M  D 
Sbjct: 437 CRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             +N +IN LCK   +  A+ +    I  GL P+++ Y TL+DGYC  G +E A++V++ 
Sbjct: 497 GCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDV 556

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGK 548
           M     +PN+V+Y +++NG CK   +D   SL +     G+  + T YN +++G F  G+
Sbjct: 557 MVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
              A   F EM   GIA+++  Y+I++  L K  C  +A  L K +    +  D  T   
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++    +    EE  +L   +  SG+ P   TY+ +++ L+ E   E+
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEE 724



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 232/495 (46%), Gaps = 43/495 (8%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI--WPNVVCFNMIINE 260
           L   M   G V +V ++ +V+ +LC + K  +A  L   M + G    PN V +N +I+ 
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + GD+  A  LF +M V  G S  P+  T+NC++N  CK   ++ AE I   M+  G+
Sbjct: 226 FFKEGDVNKACDLFNEM-VQRGIS--PDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY +LI GY+  G  +EA+R+  +M  +G++P+ V  NS +  L   G ++ A  
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V   M  K    D F+Y I+  G    GC+    +L N +L + +  D++ +N+LI    
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   L  A  + + M  +G+ PD++TY T+I   C+ G ++ AV+ +  M      P++ 
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIS 462

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL--------------------LDA------- 533
            Y+ +I G C    L  AK L+      G+                    +DA       
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFT 522

Query: 534 ---------ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
                    + YNTL++GY + GK+  A  +F  M + GI  N V Y  L+N  CK G  
Sbjct: 523 ISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRI 582

Query: 585 QQARELMKVMILHGIIPDYVTYTTLV-TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            +   L + ++  GI P    Y  ++   F    +    ++ H+ M  SG++ D  TY+ 
Sbjct: 583 DEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHE-MTESGIAMDRYTYSI 641

Query: 644 IISPLLGEKSAEDQV 658
           ++  L     +++ +
Sbjct: 642 VLGGLFKNSCSDEAI 656



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 221/435 (50%), Gaps = 21/435 (4%)

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           NLM ++ ++P        DS+        +F+ L++A  + G  + A  +  +++ +G  
Sbjct: 380 NLMLSDGIAP--------DSH--------IFNVLIKAYAKCGMLDRATIIFNEMREQGVE 423

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
             +  ++  ++ L ++ ++    + + +M+  G   +++T++ +I   C    L +A  L
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL 483

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             +M+  G+ P++ CFN IIN  C++G +  A  +F    +  G  + PN + +N +++G
Sbjct: 484 VLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF-DFTISIG--LHPNVMVYNTLMDG 540

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           +C +G++E A  +   M+ AGI  NV  Y TL++GY + G  +E L L  E++ +G+ P+
Sbjct: 541 YCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPS 600

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
             +YN  +H LF  G    A     +M +  I  D +TYSI+  GL +N C  +A  L  
Sbjct: 601 TTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFK 660

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++   ++  D  + NI+I  + +   +  AK L +S+   GL+P ++TY  ++    K G
Sbjct: 661 ELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEG 720

Query: 479 NIEGAVQVYENMKKVE-KKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITY 536
            +E A  ++ +M+    ++PN  + N ++  L +   +  A + L +  +R   LD  T 
Sbjct: 721 LVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTT 780

Query: 537 NTLINGYFINGKIAE 551
             LI+ +   G   E
Sbjct: 781 TLLIDLFSSKGTCRE 795



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 4/340 (1%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            + TY  L+D   R    +  L    +++K GL  + ++ ++ +  L        AL +L
Sbjct: 107 TLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDIL 166

Query: 383 SDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV--GDAYSYNILINYL 439
              +    C PD F+Y I+ K LC +    QA +L   + E   V   +A +YN +I+  
Sbjct: 167 LHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGF 226

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K  ++  A  L + M+ RG+ PD+ TY  +++  CK   ++ A  +   M      P+ 
Sbjct: 227 FKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDN 286

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
             YNS+I G         A  + +     G+L D +T N+L+     +GKI +A  +F  
Sbjct: 287 WTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDS 346

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G   +   Y I++N     GC     EL  +M+  GI PD   +  L+  ++K   
Sbjct: 347 MAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGM 406

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +    + ++M   GV PD  TY+ +I+ L      +D V
Sbjct: 407 LDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 39/295 (13%)

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM------------------------ 425
           + P   TY IL     R    K       QVL+  +                        
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 426 ------------VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI--PDIITYGTLI 471
                       V D +SY I++  LC       A +LL  M   G +  P+ + Y T+I
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           DG+ K G++  A  ++  M +    P+L  YN ++N LCK  ++D A+++L+     G+L
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TYN+LI GY   G+  EA  +  +M + GI  + V  N L+  LCK G  + AR++
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              M + G   D  +Y  ++  ++      ++ EL + M+  G++PD+  +N +I
Sbjct: 344 FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 9/260 (3%)

Query: 405 CRNGCVKQAFKLHNQVLEEH----MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
           CR+G    A  L N+V   H    +    ++Y IL++   +++           ++  GL
Sbjct: 81  CRDG-PALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGL 139

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVY-ENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             D I    L+ G C+      A+ +    M  +   P++  Y  ++  LC D     A 
Sbjct: 140 GIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQAD 199

Query: 520 SLLQASQRIG---LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            LL+     G   L +A+ YNT+I+G+F  G + +A  +F+EM   GI+ +   YN ++N
Sbjct: 200 ELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVN 259

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK     +A  +++ M+  G++PD  TY +L+  +S     +E + +   M   G+ P
Sbjct: 260 ALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILP 319

Query: 637 DNQTYNAIISPLLGEKSAED 656
           D  T N++++ L      +D
Sbjct: 320 DVVTLNSLMASLCKHGKIKD 339


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 221/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        + HL+KL      W  Y+
Sbjct: 66  XYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR   VM    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+  CK G++    ++ + M++    PN+V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVV 417



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 151/278 (54%), Gaps = 1/278 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  ++ K G+  +V ++ TL++GY + G  +E  RL   M  
Sbjct: 140 NILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+B  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
            I TY  +IN     G +     +  EM+  G   N V
Sbjct: 380 EIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVV 417



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 140/277 (50%), Gaps = 1/277 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L + + 
Sbjct: 139 FNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y  M      P+L+ YN++I GLCK   L  A  L+      GL  D ITY TLI
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I  + V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           P+  TYT ++    K        +L  +M   G  P+
Sbjct: 379 PEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPN 415



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 154/294 (52%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + S M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L+PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R    D + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRX---DDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P+ VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++  CK   +  A+ +  S+   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+     P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 238 VPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   K  +L    +L S 
Sbjct: 137 YFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +      LL D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + P+  TY  II+
Sbjct: 377 LKPEIGTYTMIIN 389


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 244/505 (48%), Gaps = 24/505 (4%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A+ + F ALV A +  G    A     ++       +   +N  L  LV    I     L
Sbjct: 135 ASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALAL 194

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y  MV+ G   N  T+N+++  LCK+    +AL ++  ML  GI PNV  + ++++  C 
Sbjct: 195 YNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCN 254

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ A++L   +G M     LP+ VT+N  ++G CK+GRV  A +    +   G    
Sbjct: 255 AGKIDEAVQL---LGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           ++ Y+ LIDG  +    +E       M++R + P+ V+Y   I      G +E AL  L 
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M  K   PD F Y+ + K LC +G +++A  L +++L+ ++V D+ +  I+I  LCK  
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A Q+   M   G  P ++TY  LIDG+ + G +E A  ++  M+ +   P+L +  
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME-MGNNPSLFL-- 488

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
                          +  L A+Q   + D+ +   L++    +G++ +A+ +   + + G
Sbjct: 489 ---------------RLTLGANQ---VRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSG 530

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V YN LIN LCK      A  L K + L GI PD +TY TL+    +     + +
Sbjct: 531 VVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAM 590

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            L  +++ SG SP    YN+++  L
Sbjct: 591 MLFQNILQSGSSPSLSIYNSMMRSL 615



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 224/470 (47%), Gaps = 53/470 (11%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           +D ++  + T  V++ +++A    G    A  +  ++   G + +   +N  +  L K  
Sbjct: 163 MDEFQ-SRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQG 221

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
             G   K++ EM+  G + NV  + +++ +LC   K++EA+ L   M   G  P+ V +N
Sbjct: 222 MAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYN 281

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
             ++  C+VG +  A   F+++ ++           ++C+I+G  +  R +        M
Sbjct: 282 AFLSGLCKVGRVNEA---FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++  I  +V  Y  +I G A  G  E+AL   D M K+G +P+   YN+ +  L   GD+
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--------------- 420
           E A  + S+M+  ++  D  T +I+  GLC+ G V +A ++ +++               
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNAL 458

Query: 421 ---------LEE------------------------HMVGDAYSYNILINYLCKSNNLAA 447
                    LEE                        + V D+ S   L++ +C+S  +  
Sbjct: 459 IDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLK 518

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LL S+I  G++PD++TY TLI+G CK  N++GAV++++ ++     P+ + Y ++I+
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLID 578

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMF 556
           GL +    + A  L Q   + G   +++ YN+++       K+++A  ++
Sbjct: 579 GLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW 628



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 205/455 (45%), Gaps = 22/455 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++A +    ++G    A+  +  L+  G ++ +  ++  +  L +       +
Sbjct: 273 CLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGF 332

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             YK M+      +V  + ++I    +  ++E+ALS    M K G  P+  C+N ++   
Sbjct: 333 GYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVL 392

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  GDLE A  L  +M  +  + VL +S T   +I G CK G V+ A +I   M + G D
Sbjct: 393 CDHGDLERAHTLRSEM--LQNNLVL-DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEM--------VKRGLMPNNVVYNST-----IHW 368
             V TY  LIDG+ R G  EEA  L  +M          R  +  N V +S      +H 
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHD 509

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           +   G V  A  +L  +ID  + PD  TY+ L  GLC+   +  A +L  ++  + +  D
Sbjct: 510 MCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPD 569

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +Y  LI+ L +++    A  L  +++  G  P +  Y +++   C+   +  A+ ++ 
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLW- 628

Query: 489 NMKKVEKKPNLVIYNSIINGLCK---DASL-DAAKSLLQASQRIGLLDAITYNTLINGYF 544
            +  + KK N  + + ++    K   D SL D  + L++  Q  G + +  Y   + G  
Sbjct: 629 -LDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLC 687

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
              +  +A  +F  ++  GI +      +LIN+LC
Sbjct: 688 QVRRTDDALRIFHTLQEFGIDITPACCALLINYLC 722



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 161/343 (46%), Gaps = 7/343 (2%)

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           AG+  +   +A L+  ++  G   +A++    M +    P   VYN+ +  L   G +  
Sbjct: 131 AGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILL 190

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL + + M+     P+  TY++L  GLC+ G    A K+ +++L+  ++ +   Y +L++
Sbjct: 191 ALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLS 250

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC +  +  A QLL SM  +G +PD +TY   + G CK G +  A Q    ++      
Sbjct: 251 SLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFAL 310

Query: 498 NLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
            L  Y+ +I+GL +    D      K++L   +R    D + Y  +I G    G+I +A 
Sbjct: 311 GLKGYSCLIDGLFQARRFDEGFGYYKTML---ERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
           +    M+  G   +   YN ++  LC  G  ++A  L   M+ + ++ D  T T ++   
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            K    +E +++ D+M   G  P   TYNA+I     E   E+
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEE 470



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/457 (21%), Positives = 172/457 (37%), Gaps = 98/457 (21%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           ++  F+  L+    ++  L   RRFD+       ++  N +SP                 
Sbjct: 304 QDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERN-ISP----------------D 346

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             ++  ++R C + G  E A   +  +K KG       +N  L  L    ++ R   L  
Sbjct: 347 VVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRS 406

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM+    V +  T  ++I  LCK   ++EA+ ++  M + G  P V+ +N +I+   + G
Sbjct: 407 EMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREG 466

Query: 266 DLEFALKLFRKMGVMSGDS----------------------------------------- 284
            LE A  LF KM + +  S                                         
Sbjct: 467 RLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSI 526

Query: 285 ----VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
               V+P+ VT+N +ING CK   ++ A  +   +   GI  +  TY TLIDG  R    
Sbjct: 527 IDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRE 586

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIH--------------WL----------------- 369
            +A+ L   +++ G  P+  +YNS +               WL                 
Sbjct: 587 NDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLA 646

Query: 370 -----FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
                  +G ++  +  L  +  ++       Y+I   GLC+      A ++ + + E  
Sbjct: 647 NAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFG 706

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           +        +LINYLC   NL AA  ++   + + +I
Sbjct: 707 IDITPACCALLINYLCWDRNLNAAVDIMLYALSKSII 743



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 7/137 (5%)

Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           DA  DA  + L AS          +  L+  +   G+ A+A   FS M           Y
Sbjct: 123 DALADARAAGLPASSS-------AFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N ++  L   G    A  L   M+  G  P+  TY  L+    K     + +++ D+M+ 
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 632 SGVSPDNQTYNAIISPL 648
            G+ P+ + Y  ++S L
Sbjct: 236 RGIMPNVKIYTVLLSSL 252



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/251 (19%), Positives = 101/251 (40%), Gaps = 33/251 (13%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           LV    Q G    AY +++ +   G    +  +N  ++ L K   +    +L+KE+   G
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+  +I  L +  +  +A+ L+  +L+SG  P++  +N ++   C++  L  A+
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAI 625

Query: 272 KLF-----RKMGVMSGDSVLPN-------------------------SVTHNCI---ING 298
            L+     +K        VL N                         S++ N     + G
Sbjct: 626 NLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIG 685

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            C++ R + A  I + + + GID      A LI+      +   A+ +    + + ++ +
Sbjct: 686 LCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILS 745

Query: 359 NVVYNSTIHWL 369
             V N  + WL
Sbjct: 746 QPVGNRLLRWL 756


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 235/467 (50%), Gaps = 4/467 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  ++ F S + +  +        K++   G   N+ T N++I   C+ CK   A S+ 
Sbjct: 87  SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +++K G  P+   FN +I      G +  A+ L  +M V +G    P+ VT+N I+NG 
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENG--CQPDVVTYNSIVNGI 203

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C+ G    A ++   M +  +  +V TY+T+ID   R G  + A+ L  EM  +G+  + 
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V YNS +  L   G       +L DM+ + I P+  T+++L     + G +++A +L+ +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++   +  +  +YN L++  C  N L+ A  +L  M+     PDI+T+ +LI GYC    
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++  ++V+ N+ K     N V Y+ ++ G C+   +  A+ L Q     G+L D +TY  
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++G   NGK+ +A  +F +++   + +  V Y  +I  +CK G  + A  L   +   G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           + P+ +TYT +++   K  S  E   L   M   G +P++ TYN +I
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 218/427 (51%), Gaps = 4/427 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K ++A++L+  M++S   P++V F+   +   +       L   +++ +   + +  N  
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL---NGIAHNIY 124

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +IN FC+  +  FA  +   ++K G + +  T+ TLI G    G   EA+ L D M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ G  P+ V YNS ++ +   GD   AL +L  M ++++  D FTYS +   LCR+GC+
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A  L  ++  + +     +YN L+  LCK+        LL  M+ R ++P++IT+  L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +D + K G ++ A ++Y+ M      PN++ YN++++G C    L  A ++L    R   
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D +T+ +LI GY +  ++ +   +F  +   G+  N V Y+IL+   C+ G  + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L + M+ HG++PD +TY  L+     N   E+ +E+ +D+  S +      Y  II  + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 650 GEKSAED 656
                ED
Sbjct: 485 KGGKVED 491



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 239/515 (46%), Gaps = 66/515 (12%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D  ++L++ G + +I+  N  ++   +  +    + +  +++  GY  +  TFN +I  L
Sbjct: 109 DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL 168

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
             E K+ EA+ L  RM+++G  P+VV +N I+N  C+ GD   AL L RKM         
Sbjct: 169 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 228

Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
                                    M    +  + VT+N ++ G CK G+      +   
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+   I  NV T+  L+D + + G  +EA  L  EM+ RG+ PN + YN+ +     +  
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  +L  M+     PD  T++ L KG C    V    K+   + +  +V +A +Y+I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+   C+S  +  A++L   M+  G++PD++TYG L+DG C  G +E A++++E+++K +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
               +V+Y +II G+CK                                   GK+ +A+ 
Sbjct: 469 MDLGIVMYTTIIEGMCK----------------------------------GGKVEDAWN 494

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +F  +   G+  N + Y ++I+ LCK G   +A  L++ M   G  P+  TY TL+    
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           ++       +L ++M   G S D  +   +I  LL
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 217/433 (50%), Gaps = 4/433 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F+ L++     G    A  ++ ++   G    +  +N+ ++ + +  +      L ++
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       +V T++ +I +LC++  ++ A+SL+  M   GI  +VV +N ++   C+ G 
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
                 L +    M    ++PN +T N +++ F K G+++ A E+   MI  GI  N+ T
Sbjct: 279 WNDGALLLKD---MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY       EA  + D MV+    P+ V + S I        V+  + V  ++ 
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + +  +  TYSIL +G C++G +K A +L  +++   ++ D  +Y IL++ LC +  L 
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++   +    +   I+ Y T+I+G CKGG +E A  ++ ++     KPN++ Y  +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK  SL  A  LL+  +  G   +  TYNTLI  +  +G +  +  +  EM++ G +
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575

Query: 566 VNKVGYNILINFL 578
            +     ++I+ L
Sbjct: 576 ADASSIKMVIDML 588



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 210/413 (50%), Gaps = 5/413 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++++V    + G T  A D+++K++ +     +  ++  +  L +   I    
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+KEM + G   +V T+N ++  LCK  K  +   L   M+   I PNV+ FN++++  
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L+ A +L+++M +  G S  PN +T+N +++G+C   R+  A  +   M++    
Sbjct: 309 VKEGKLQEANELYKEM-ITRGIS--PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ T+ +LI GY      ++ +++   + KRGL+ N V Y+  +      G ++ A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   + PD  TY IL  GLC NG +++A ++   + +  M      Y  +I  +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  L  S+  +G+ P+++TY  +I G CK G++  A  +   M++    PN   
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
           YN++I    +D  L A+  L++  +  G   DA +   +I+   ++G++ ++F
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID-MLLSGELDKSF 597



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 1/288 (0%)

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           NV +   +     +   + A+ +  +MI     P    +S     + R            
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           Q+    +  + Y+ NI+IN  C+      A  +L  ++  G  PD  T+ TLI G    G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYN 537
            +  AV + + M +   +P++V YNSI+NG+C+      A  LL+   +R    D  TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T+I+    +G I  A ++F EM   GI  + V YN L+  LCK G +     L+K M+  
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            I+P+ +T+  L+  F K    +E  EL+ +M+  G+SP+  TYN ++
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 232/459 (50%), Gaps = 6/459 (1%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           H+  I  +N  L  LVKL        L K+M   G  +N+ T +++I   C   ++  + 
Sbjct: 6   HTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSF 65

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           SL  ++LK G  PN + +  ++   C  G+++  L    K+      +   N V++  ++
Sbjct: 66  SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKV---VAQAFQTNQVSYGTLL 122

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           NG CK G    A ++   +       NV  Y+ +IDG  +     EA  L  EM  R + 
Sbjct: 123 NGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           PN + YN+ I      G + GA  +L +MI K+I PD +T+SIL   LC+ G  K A ++
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQI 240

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            + +++  +  + YSYNI+IN LCK   +  A  LL  M+ + ++PD +TY +LIDG CK
Sbjct: 241 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 300

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-T 535
            G I  A+ +   M    +  ++V Y S+++ LCK+ +LD A +L    +  G+   + T
Sbjct: 301 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 360

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y  LI+G    G++  A  +F  +   G  ++   Y ++I+ LCK G + +A  +   M 
Sbjct: 361 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 420

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            +G IP+ VT+  ++    +    ++  +L  +M+  G+
Sbjct: 421 DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 223/440 (50%), Gaps = 7/440 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K       +SL  +M   GI  N+V  +++IN  C +G + F+  L  K+ 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      PN++T   ++ G C  G V+        ++      N  +Y TL++G  + G
Sbjct: 73  KLG---YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  A++L   +  R   PN V+Y++ I  L  +  V  A  + S+M  + I P+  TY+
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L    C  G +  AF L ++++ +++  D Y+++ILI+ LCK      AKQ+  +M+  
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P++ +Y  +I+G CK   ++ A+ +   M      P+ V YNS+I+GLCK   + +A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 519 KSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +L+ +   R    D +TY +L++    N  + +A A+F +M+  GI      Y  LI+ 
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 367

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G  + A+EL + +++ G   D  TYT +++   K    +E + +   M  +G  P+
Sbjct: 368 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 427

Query: 638 NQTYNAIISPLLGEKSAEDQ 657
             T+  II  L  EK   D+
Sbjct: 428 AVTFEIIIRSLF-EKDENDK 446



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 220/432 (50%), Gaps = 6/432 (1%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           +++ VKG   ++   +  ++    L ++   + L  +++  GY  N  T+  ++  LC +
Sbjct: 34  KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            ++++ L  + +++      N V +  ++N  C+ G+   A+KL R   ++   S  PN 
Sbjct: 94  GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLR---MIEDRSTRPNV 150

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           V ++ II+G CK   V  A ++   M    I  NV TY TLI  +   G    A  L  E
Sbjct: 151 VMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHE 210

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+ + + P+   ++  I  L  EG  + A  +   M+   + P+ ++Y+I+  GLC+   
Sbjct: 211 MILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V +A  L  ++L ++MV D  +YN LI+ LCKS  + +A  L++ M  RG   D++TY +
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+D  CK  N++ A  ++  MK+   +P +  Y ++I+GLCK   L  A+ L Q     G
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388

Query: 530 -LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
             +D  TY  +I+G    G   EA A+ S+M + G   N V + I+I  L +     +A 
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 448

Query: 589 ELMKVMILHGII 600
           +L+  MI  G++
Sbjct: 449 KLLHEMIAKGLL 460



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 202/402 (50%), Gaps = 6/402 (1%)

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           ++ FN I+    ++      + L ++M V     +  N VT + +IN FC LG++ F+  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDV---KGIEQNLVTLSILINCFCHLGQMAFSFS 66

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   ++K G   N  T+ TL+ G    G  ++ L   D++V +    N V Y + ++ L 
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+   A+ +L  + D+   P+   YS +  GLC++  V +A+ L++++    +  +  
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN LI   C +  L  A  LL  MI++ + PD+ T+  LID  CK G  + A Q++  M
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAM 244

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
            ++   PN+  YN +INGLCK   +D A +LL+      ++ D +TYN+LI+G   +G+I
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             A  + +EM + G   + V Y  L++ LCK     +A  L   M   GI P   TYT L
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +    K    +   EL   +++ G   D  TY  +IS L  E
Sbjct: 365 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKE 406



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 160/323 (49%), Gaps = 5/323 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G T  A  +++ ++ +    ++  ++  +  L K   +   + LY EM 
Sbjct: 118 YGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMD 177

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           +     NV T+N +I A C   +L  A SL + M+   I P+V  F+++I+  C+ G  +
Sbjct: 178 AREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--K 235

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A ++F  M  M    V PN  ++N +ING CK  RV+ A  +   M+   +  +  TY 
Sbjct: 236 NAKQIFHAMVQM---GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYN 292

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LIDG  + G    AL L +EM  RG   + V Y S +  L    +++ A  +   M ++
Sbjct: 293 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 352

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I P  +TY+ L  GLC+ G +K A +L   +L +    D ++Y ++I+ LCK      A
Sbjct: 353 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 412

Query: 449 KQLLSSMIVRGLIPDIITYGTLI 471
             + S M   G IP+ +T+  +I
Sbjct: 413 LAIKSKMEDNGCIPNAVTFEIII 435



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 165/314 (52%), Gaps = 5/314 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++ A++    +      AYD+  ++  +    ++  +N  +       ++   + L  EM
Sbjct: 152 MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEM 211

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +      +V TF+++I ALCKE K   A  +++ M++ G+ PNV  +N++IN  C+   +
Sbjct: 212 ILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 269

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ L R+   M   +++P++VT+N +I+G CK GR+  A  +   M   G   +V TY
Sbjct: 270 DEAMNLLRE---MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 326

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L+D   +  + ++A  L  +M +RG+ P    Y + I  L   G ++ A  +   ++ 
Sbjct: 327 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 386

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K  C D +TY+++  GLC+ G   +A  + +++ +   + +A ++ I+I  L + +    
Sbjct: 387 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 446

Query: 448 AKQLLSSMIVRGLI 461
           A++LL  MI +GL+
Sbjct: 447 AEKLLHEMIAKGLL 460



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 5/280 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+ A    G   GA+ ++ ++ +K  +  ++ ++  +  L K  +  +  +++  M
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAM 244

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   NV ++N++I  LCK  +++EA++L   ML   + P+ V +N +I+  C+ G +
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL L   M  M       + VT+  +++  CK   ++ A  +   M + GI   + TY
Sbjct: 305 TSALNL---MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 361

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LIDG  +GG  + A  L   ++ +G   +   Y   I  L  EG  + AL + S M D
Sbjct: 362 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 421

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
               P+  T+ I+ + L       +A KL ++++ + ++G
Sbjct: 422 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLG 461



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 9/232 (3%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +N ++  L K         L   M V+G+  +++T   LI+ +C  G +  +  +   + 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAA-----KSLLQASQRIGLLDAITYNTLINGYFIN 546
           K+   PN + + +++ GLC    +        K + QA Q     + ++Y TL+NG    
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQT----NQVSYGTLLNGLCKT 128

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G+   A  +   + +     N V Y+ +I+ LCK     +A +L   M    I P+ +TY
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITY 188

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            TL+  F           L  +M+L  ++PD  T++ +I  L  E     Q+
Sbjct: 189 NTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQI 240



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 116/248 (46%), Gaps = 25/248 (10%)

Query: 50  ILEQMAPSL-TNSLVNRVVSEFRKSPKLALEFYTWVGEN-NRFSHSLESSCAIVHLLVNW 107
           IL+ + P + T S++   + +  K+ K        +G N N +S+++     +++ L   
Sbjct: 212 ILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNI-----MINGLCKC 266

Query: 108 RRFDDALLLMGNLMSAN----SVSPLEFLEGLLDSYEICKA-----------TPA---VF 149
           +R D+A+ L+  ++  N    +V+    ++GL  S  I  A            PA    +
Sbjct: 267 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 326

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
            +L+ A  +    + A  +  K+K +G   +++ +   +  L K   +    +L++ ++ 
Sbjct: 327 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 386

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   +V T+ ++I  LCKE   +EAL++  +M  +G  PN V F +II    +  + + 
Sbjct: 387 KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDK 446

Query: 270 ALKLFRKM 277
           A KL  +M
Sbjct: 447 AEKLLHEM 454


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 229/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A  +   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +++ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HAPSVVTYNVLMNG 431



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 161/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++GA  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  ++N +   G + +   +  EM+  G A + V YN+L+N
Sbjct: 386 DTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A  L   M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT +V  F K     +  +L  +M   G +P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+  A  +F EM   G+  N V +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    K    ++  +L D+M +
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 311 KGLKPDKFTYTTLI 324


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 261/563 (46%), Gaps = 38/563 (6%)

Query: 100  IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
            ++ LLV  RR+DDA  L   ++  +S +         D+Y  C         LVR     
Sbjct: 949  LLKLLVEQRRWDDARKLYDEMLGKDSGA---------DNYSTC--------VLVRGLCLE 991

Query: 160  GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
               E    +I+     G    +  +N  +    +  ++GR   L  EM + G++  + T+
Sbjct: 992  RRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTY 1051

Query: 220  NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
              +I  L K+  LE+  SL+  M K G  PNV  +N +I+  C       A+ + ++M  
Sbjct: 1052 GSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFA 1111

Query: 280  MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
               D   P+ +T N +I G C  G V  AE      I+  ++ N  +Y  LI G+   G 
Sbjct: 1112 SGCD---PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1168

Query: 340  SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
               A  L  EM+ RG  P+ V + + IH L   G V  AL V   M ++ + PD   Y++
Sbjct: 1169 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1228

Query: 400  LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
            L  GLC+   +  A  +  ++LE+++  D + Y  LI+   +S NL  A+++   M  +G
Sbjct: 1229 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 1288

Query: 460  LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA- 518
            + PDI++   +I GYC+ G +  A+    NM+KV   P+   Y ++I+G  K  +L+ A 
Sbjct: 1289 VCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1348

Query: 519  KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            + L    +R    + +TY++LINGY   G    A  +F+ M+   ++ N V Y ILI  L
Sbjct: 1349 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSL 1408

Query: 579  CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP----------------EEV 622
             K     +A    + M+L+   P+ VT   LV   + +C+P                + +
Sbjct: 1409 FKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLT-SCTPCVINSICCNTSEVHGKDAL 1467

Query: 623  IELHDDMVLSGVSPDNQTYNAII 645
            + +   +V     P N  YNAII
Sbjct: 1468 LVVFKKLVFDIGDPRNSAYNAII 1490



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 209/437 (47%), Gaps = 4/437 (0%)

Query: 211  GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
            G +  V   N ++  L ++ + ++A  LY  ML      +     +++   C    +E  
Sbjct: 938  GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 997

Query: 271  LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            LKL        G   +P+ V +N +I+G+C+ G +     +   M   G    + TY +L
Sbjct: 998  LKLIE---ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSL 1054

Query: 331  IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
            I+   + G  E+   L  EM KRG  PN  +YNS I  L        A+ +L  M     
Sbjct: 1055 INWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGC 1114

Query: 391  CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             PD  T++ L  GLC  G V++A     + +   +  +  SY  LI+  C    L  A  
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1174

Query: 451  LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
            LL  M+ RG  PD++T+G LI G    G +  A+ V E M + +  P++ IYN +I+GLC
Sbjct: 1175 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLC 1234

Query: 511  KDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
            K   L AAK++L+   ++    D   Y TLI+G+  +  + +A  +F  M + G+  + V
Sbjct: 1235 KKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIV 1294

Query: 570  GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
              N +I   C+FG   +A   M  M   G IPD  TYTT+++ ++K  +    +    DM
Sbjct: 1295 SCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1354

Query: 630  VLSGVSPDNQTYNAIIS 646
            +     P+  TY+++I+
Sbjct: 1355 IKRKCKPNVVTYSSLIN 1371



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 2/364 (0%)

Query: 287  PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            P  + H+ ++    +  R +  ++   +M  AG          L+  YA  G   +A  +
Sbjct: 870  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM 929

Query: 347  CDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
            C+ + ++ G +P     N  +  L  +   + A  +  +M+ K    D+++  +L +GLC
Sbjct: 930  CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLC 989

Query: 406  RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
                V++  KL         +     YN+LI+  C+  ++     LL  M   G +P ++
Sbjct: 990  LERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLV 1049

Query: 466  TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            TYG+LI+   K G++E    ++  M+K    PN+ IYNS+I+ LC   S   A  +L+  
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109

Query: 526  QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
               G   D IT+NTLI G    G + +A     E     +  N++ Y  LI+  C  G  
Sbjct: 1110 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1169

Query: 585  QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
              A +L+  M+  G  PD VT+  L+          E + + + M    V PD   YN +
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229

Query: 645  ISPL 648
            IS L
Sbjct: 1230 ISGL 1233



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 167/364 (45%), Gaps = 24/364 (6%)

Query: 165  AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            A D++ ++  +GH+  +  +   +  LV   ++     + ++M       +VN +N++I 
Sbjct: 1172 ASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 1231

Query: 225  ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             LCK+  L  A ++   ML+  + P+   +  +I+   +  +L  A K+F     M    
Sbjct: 1232 GLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE---FMEHKG 1288

Query: 285  VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
            V P+ V+ N +I G+C+ G +  A      M K G   +  TY T+I GYA+ G+   AL
Sbjct: 1289 VCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1348

Query: 345  R-LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            R LCD M+KR   PN V Y+S I+     GD + A  + ++M  + + P+  TY+IL   
Sbjct: 1349 RWLCD-MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGS 1407

Query: 404  LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL------------CKSNNLAAAKQL 451
            L +   V +A      +L  H   +  + + L+N L            C ++ +     L
Sbjct: 1408 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDAL 1467

Query: 452  LSSMIVRGLIPDI-----ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            L  ++ + L+ DI       Y  +I   C+   +  A+     M K    PN + + S++
Sbjct: 1468 L--VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1525

Query: 507  NGLC 510
             G C
Sbjct: 1526 YGFC 1529



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 27/49 (55%)

Query: 217  NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            + +N +I++LC+   L EAL    RM K G  PN + F  ++   C VG
Sbjct: 1484 SAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 1532


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 247/487 (50%), Gaps = 4/487 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ ++ +  ++     A  +  +L++KG    +   N  ++    + +I   + +  +++
Sbjct: 310 FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKIL 369

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY  +  T N +I  LC + ++++AL  + ++L  G   N V +  +IN  C++GD  
Sbjct: 370 KRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 429

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+KL RK+    G    PN   ++ II+  CK   V  A  +   M   GI  +V TY+
Sbjct: 430 GAIKLLRKI---DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 486

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI G+   G  +EA+ L +EMV + + P+   Y   +  L  EG V+ A  VL+ M+  
Sbjct: 487 TLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA 546

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD FTY+ L  G      VK+A  + N +    +  D ++Y ILIN  CKS  +  A
Sbjct: 547 CVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEA 606

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L   M  + ++PD +TY +L+DG CK G I     + + M+   +  +++ YNS+I+G
Sbjct: 607 LNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDG 666

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK+  LD A +L    +  G+  +  T+  L++G    G++ +A  +F ++   G  ++
Sbjct: 667 LCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLD 726

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
              YN++I   CK G  ++A  ++  M  +G IP+ VT+  ++    K    ++  +L  
Sbjct: 727 VYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLR 786

Query: 628 DMVLSGV 634
            M+  G+
Sbjct: 787 QMIARGL 793



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 265/529 (50%), Gaps = 41/529 (7%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V   + + G +  +H++N  ++   K+  + +   L+KEM+   +   +  FN ++ 
Sbjct: 257 AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILD 315

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           +  K      A+SL +R+   GI P++   N++IN  C +G + F   +  K+ +  G  
Sbjct: 316 SFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKI-LKRGYP 374

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P++VT N +I G C  G+V+ A      ++  G   N  +YATLI+G  + G +  A+
Sbjct: 375 --PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432

Query: 345 RLCDEMVKRGLMPNNVVYNSTI------------HWLFAEGDVEG--------------- 377
           +L  ++  R   PN  +Y++ I            + LF+E  V+G               
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492

Query: 378 --------ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
                   A+ +L++M+ K I PD  TY+IL   L + G VK+A  +   +L+  +  D 
Sbjct: 493 CIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDV 552

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           ++YN L+N       +  A+ + ++M + G+ PD+ TY  LI+G+CK   ++ A+ +++ 
Sbjct: 553 FTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKE 612

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGK 548
           M +    P+ V Y+S+++GLCK   +     L+ +   R    D ITYN+LI+G   NG 
Sbjct: 613 MHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH 672

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +A A+F++M++ GI  N   + IL++ LCK G  + A+E+ + ++  G   D   Y  
Sbjct: 673 LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNV 732

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           ++    K    EE + +   M  +G  P+  T++ II+ L  +K   D+
Sbjct: 733 MIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALF-KKDENDK 780



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 273/572 (47%), Gaps = 42/572 (7%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           A L+ G     ++ + ++FL  +     + K    +++ ++ A  +      AY +  ++
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKI--DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
            VKG S ++  ++  +     + ++     L   MV      NV T+N+++ ALCKE K+
Sbjct: 160 TVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +EA S+   MLK+ +  NV+ ++ +++    V +++ A  +F  M +M    V P+  ++
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLM---GVTPDVHSY 276

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +INGFCK+ RV+ A  +   MI +     ++ +  ++D +A+      A+ L   +  
Sbjct: 277 NIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLEL 335

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +G+ P+    N  I+     G +     VL+ ++ +   P   T + L KGLC  G VK+
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL-------------------- 452
           A   H+++L +    +  SY  LIN +CK  +   A +LL                    
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 453 ---------------SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
                          S M V+G+  D++TY TLI G+C  G ++ A+ +   M      P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           ++  Y  +++ L K+  +  AKS+L    +  +  D  TYNTL+NGY +  ++ +A  +F
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M  +G+  +   Y ILIN  CK     +A  L K M    ++PD VTY++LV    K+
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                V +L D+M   G   D  TYN++I  L
Sbjct: 636 GRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 251/510 (49%), Gaps = 7/510 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    +IG T  A   ++K+  +    ++  +N  +  L K   +   + L+ EM 
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   NV T++ +IY  C   KL+EAL L   M+   I PNV  +N++++  C+ G ++
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +   + VM    V  N +T++ +++G+  +  V+ A+ +  AM   G+  +V +Y 
Sbjct: 221 EAKSV---LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYN 277

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID- 387
            +I+G+ +    ++AL L  EM+     P  ++  + I   FA+         LS  ++ 
Sbjct: 278 IMINGFCKIKRVDKALNLFKEMILSRFPP--IIQFNKILDSFAKMKHYSTAVSLSHRLEL 335

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD FT +IL    C  G +   F +  ++L+        + N LI  LC    +  
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A      ++ +G   + ++Y TLI+G CK G+  GA+++   +     KPN+ +Y++II+
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LCK   +  A  L       G+  D +TY+TLI G+ I GK+ EA  + +EM    I  
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y IL++ L K G  ++A+ ++ VM+   + PD  TY TL+  +      ++   + 
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + M L GV+PD  TY  +I+     K  ++
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDE 605



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 219/485 (45%), Gaps = 46/485 (9%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  +  T N +I  LC + +++EAL  + ++L  G   N V +  +IN  C++GD   A
Sbjct: 58  GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           +K  RK+    G    PN   +N II+  CK   V  A  +   M   GI  NV TY+TL
Sbjct: 118 IKFLRKI---DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTL 174

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I G+   G  +EAL L + MV + + PN   YN  +  L  EG V+ A  VL+ M+   +
Sbjct: 175 IYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACV 234

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             +  TYS L  G      VK+A  + N +    +  D +SYNI+IN  CK   +  A  
Sbjct: 235 KSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALN 294

Query: 451 LLSSMI----------------------------------VRGLIPDIITYGTLIDGYCK 476
           L   MI                                  ++G+ PD+ T   LI+ +C 
Sbjct: 295 LFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCH 354

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-----KSLLQASQRIGLL 531
            G I     V   + K    P+ V  N++I GLC    +  A     K L Q  Q    L
Sbjct: 355 MGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ----L 410

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + ++Y TLING    G    A  +  ++       N   Y+ +I+ LCK+    +A  L 
Sbjct: 411 NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLF 470

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M + GI  D VTY+TL+  F      +E I L ++MVL  ++PD +TY  ++  L  E
Sbjct: 471 SEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKE 530

Query: 652 KSAED 656
              ++
Sbjct: 531 GKVKE 535



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 241/499 (48%), Gaps = 5/499 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            + L++     G  + A     KL  +G  ++  ++   ++ + ++ +     K  +++ 
Sbjct: 66  LNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKID 125

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 NV  +N +I ALCK   + EA  L+  M   GI  NVV ++ +I   C VG L+
Sbjct: 126 GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLK 185

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL L   + VM   ++ PN  T+N +++  CK G+V+ A+ +   M+KA +  NV TY+
Sbjct: 186 EALGL---LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYS 242

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TL+DGY      ++A  + + M   G+ P+   YN  I+       V+ AL +  +MI  
Sbjct: 243 TLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILS 302

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P    ++ +     +      A  L +++  + +  D ++ NILIN  C    +   
Sbjct: 303 RF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFG 361

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             +L+ ++ RG  P  +T  TLI G C  G ++ A+  ++ +     + N V Y ++ING
Sbjct: 362 FSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLING 421

Query: 509 LCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +CK      A  LL+    R+   +   Y+T+I+       ++EA+ +FSEM   GI+ +
Sbjct: 422 VCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISAD 481

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y+ LI   C  G  ++A  L+  M+L  I PD  TYT LV    K    +E   +  
Sbjct: 482 VVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541

Query: 628 DMVLSGVSPDNQTYNAIIS 646
            M+ + V PD  TYN +++
Sbjct: 542 VMLKACVKPDVFTYNTLMN 560



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 149/305 (48%), Gaps = 37/305 (12%)

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM------------ 425
           +L VL+ ++ +   PD  T + L KGLC  G VK+A   H+++L +              
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 426 ----VGDAYS-------------------YNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
               +GD  +                   YN +I+ LCK   ++ A  L S M V+G+  
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +++TY TLI G+C  G ++ A+ +   M      PN+  YN +++ LCK+  +  AKS+L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
               +  +  + ITY+TL++GYF+  ++ +A  +F+ M  +G+  +   YNI+IN  CK 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
               +A  L K MIL    P  + +  ++  F+K       + L   + L G+ PD  T 
Sbjct: 287 KRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 642 NAIIS 646
           N +I+
Sbjct: 346 NILIN 350



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 1/201 (0%)

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           A +  +L+ ++ RG  PD +T  TLI G C  G ++ A+  ++ +     + N V Y ++
Sbjct: 45  AVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATL 104

Query: 506 INGLCKDASLDAA-KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ING+C+     AA K L +   R+   +   YNT+I+       ++EA+ +FSEM   GI
Sbjct: 105 INGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGI 164

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           + N V Y+ LI   C  G  ++A  L+ VM+L  I P+  TY  LV    K    +E   
Sbjct: 165 SANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKS 224

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           +   M+ + V  +  TY+ ++
Sbjct: 225 VLAVMLKACVKSNVITYSTLM 245


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 238/469 (50%), Gaps = 10/469 (2%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI ++N  L+ L K+    + + LYK+M   G   ++ T N++I  LC   ++ E L+  
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +++ G  P+VV F  +I   C    +  A KLF +M  +      PN VT+  +I G 
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG---CTPNVVTYGTLIKGL 206

Query: 300 CKLGRVEFAEEIRYAMIKAG----IDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           C LG +  A +    M+        +C  NV +Y+ +IDG  + G+ EEA+ L +EMV +
Sbjct: 207 CALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQ 266

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ PN V ++  I  L  EG V  A  +L  MI   I P+ FTY+ L KG C  G +  A
Sbjct: 267 GVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSA 326

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L   +  +    D  SYN+LIN  CK+  +  A +L + M+  G+ PD+ T G L+  
Sbjct: 327 KELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKA 386

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
               G ++ A +++  +K      +L I    ++GLCK+  +  A  L    +   + LD
Sbjct: 387 LFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLD 446

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             T+  LI+G    GK+  A+ +F ++   GI  + + Y+ +I+  CK G   +A  L +
Sbjct: 447 IETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQ 506

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
            M  +G  PD +TY+ L+  F ++   E+V++L   M+   V PD+  Y
Sbjct: 507 KMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIY 555



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 237/481 (49%), Gaps = 4/481 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+    +I      + + +++ + G    +   N  ++ L  +N I         ++
Sbjct: 94  FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY+ +V TF  +I  LC E ++ EA  L+ RM K G  PNVV +  +I   C +G++ 
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 269 FALKLFRKMGVMSGDSVL---PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            ALK  ++M   +   V    PN ++++ II+G CK+G  E A  +   M+  G+  NV 
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV 273

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T++ LID   + G   +A +L + M++ G++PN   Y S I      GD+  A  +   M
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K   PD  +Y++L  G C+   V++A KL N++L   M  D  +  +L+  L  +  +
Sbjct: 334 PSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             AK+L   +    +  D+      +DG CK G I  A++++  ++    K ++  +  +
Sbjct: 394 DDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCL 453

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+GLCK   L+ A  L +     G+  DA+ Y+++I+G+   G++ +A  +F +M   G 
Sbjct: 454 IDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGC 513

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           + + + Y+IL+    +    ++  +L+  MI   + PD   Y  +     K+   +E ++
Sbjct: 514 SPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLD 573

Query: 625 L 625
           L
Sbjct: 574 L 574



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 175/373 (46%), Gaps = 7/373 (1%)

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           D ++ +  + N ++ G  K+        +   M  AG+  ++ T   LI+         E
Sbjct: 85  DLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINE 144

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
            L     +++RG +P+ V + + I  L  E  +  A  +   M      P+  TY  L K
Sbjct: 145 GLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIK 204

Query: 403 GLCRNGCVKQAFKLHNQVLEE------HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           GLC  G +  A K H ++L +      +   +  SY+I+I+ LCK  N   A  L + M+
Sbjct: 205 GLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMV 264

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            +G+ P+++T+  LID  CK G +  A ++ E M ++   PNL  Y S+I G C    L+
Sbjct: 265 DQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLN 324

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
           +AK L  +    G   D I+YN LINGY    K+ EA  +F+EM +VG+  +     +L+
Sbjct: 325 SAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLL 384

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
             L   G    A+EL +V+  + +  D       +    KN    E ++L +++    + 
Sbjct: 385 KALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMK 444

Query: 636 PDNQTYNAIISPL 648
            D +T+  +I  L
Sbjct: 445 LDIETFGCLIDGL 457



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 42/304 (13%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           F+++ L  GL +     Q F L+ Q+    +  D  + NILIN LC  N +      ++ 
Sbjct: 92  FSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAG 151

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           ++ RG IPD++T+ TLI G C    I  A +++  M+K+   PN+V Y ++I GLC   +
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGN 211

Query: 515 LDAA----KSLLQASQRIGL---LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           ++ A    + +L  +         + I+Y+ +I+G    G   EA  +F+EM + G+  N
Sbjct: 212 INIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPN 271

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIP-------------------------- 601
            V +++LI+ LCK G   +A++L+++MI  GI+P                          
Sbjct: 272 VVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFV 331

Query: 602 ---------DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
                    D ++Y  L+  + K    EE ++L ++M+  G+ PD +T   ++  L    
Sbjct: 332 SMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAG 391

Query: 653 SAED 656
             +D
Sbjct: 392 KVDD 395



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 151/313 (48%), Gaps = 5/313 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F  L+    + G    A  +++ +   G   ++  + + +     + ++    +L+  
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M S GY  +V ++N++I   CK  K+EEA+ L+  ML  G+WP+V    +++      G 
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCI-INGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           ++ A +LFR +   +    +P  +   CI ++G CK G +  A ++   +    +  ++ 
Sbjct: 393 VDDAKELFRVIKPYA----MPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE 448

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+  LIDG  + G  E A  L +++ + G+ P+ + Y+S IH    +G V+ A  +   M
Sbjct: 449 TFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKM 508

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            +    PD  TYSIL +G   +  +++  +L ++++E+ +  D   Y I+ + +CK    
Sbjct: 509 EENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKY 568

Query: 446 AAAKQLLSSMIVR 458
                LL    V+
Sbjct: 569 KEWLDLLQRFFVQ 581



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 13/340 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  ++    ++G  E A  +  ++  +G   ++  ++  +  L K  ++ +  
Sbjct: 233 CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAK 292

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL + M+  G V N+ T+  +I   C    L  A  L+  M   G  P+V+ +NM+IN  
Sbjct: 293 KLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGY 352

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI-----RYAMI 316
           C+   +E A+KLF +M  +    + P+  T   ++      G+V+ A+E+      YAM 
Sbjct: 353 CKTLKVEEAMKLFNEMLHV---GMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMP 409

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           K    C +      +DG  + G   EA++L +E+    +  +   +   I  L   G +E
Sbjct: 410 KDLCICCI-----FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLE 464

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +   + ++ I PD   YS +  G C+ G V +A  L  ++ E     D  +Y+IL+
Sbjct: 465 TAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILM 524

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
               +SN L    QLL  MI + + PD   Y  + D  CK
Sbjct: 525 RGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCK 564


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 236/473 (49%), Gaps = 7/473 (1%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           NN L  +V+  E+   +K  + MV  G V ++     +I   C+  K  +A  +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           SG  P+V+ +N++I+  C+ G++  AL +  +M      SV P+ VT+N I+   C  G+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM------SVSPDVVTYNTILRSLCDSGK 219

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++ A E+   M++     +V TY  LI+   R      A++L DEM  RG  P+ V YN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++ +  EG ++ A+  L+DM      P+  T++I+ + +C  G    A KL   +L + 
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
                 ++NILIN+LC+   L  A  +L  M   G  P+ ++Y  L+ G+CK   ++ A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGY 543
           +  E M      P++V YN+++  LCKD  + DA + L Q S +      ITYNT+I+G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              GK  +A  +  EMR   +  + + Y+ L+  L + G   +A +        GI P+ 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           VT+ +++    K+   +  I+    M+  G  P+  +Y  +I  L  E  A++
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 237/483 (49%), Gaps = 7/483 (1%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           +R   + G  E  +  ++ +   G+   I      +    +L +  +  K+ + +   G 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V +V T+N++I   CK  ++  ALS+  RM    + P+VV +N I+   C  G L+ A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +  +M  +  D   P+ +T+  +I   C+   V  A ++   M   G   +V TY  L++
Sbjct: 226 VLDRM--LQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  + G  +EA++  ++M   G  PN + +N  +  + + G    A  +L+DM+ K   P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
              T++IL   LCR G + +A  +  ++ +     ++ SYN L++  CK   +  A + L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M+ RG  PDI+TY T++   CK G +E AV++   +      P L+ YN++I+GL K 
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
                A  LL   +   L  D ITY++L+ G    GK+ EA   F E   +GI  N V +
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N ++  LCK     +A + +  MI  G  P+  +YT L+   +     +E +EL +++  
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582

Query: 632 SGV 634
            G+
Sbjct: 583 KGL 585



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 227/443 (51%), Gaps = 8/443 (1%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y  + S   +E+V + N  +  + +  +LEE       M+  G  P+++    +I   C+
Sbjct: 91  YSSVNSSFALEDVESNNH-LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G    A K+     ++ G   +P+ +T+N +I+G+CK G +  A  +   + +  +  +
Sbjct: 150 LGKTRKAAKILE---ILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPD 203

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY T++      G  ++A+ + D M++R   P+ + Y   I     +  V  A+ +L 
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M D+   PD  TY++L  G+C+ G + +A K  N +       +  ++NI++  +C + 
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               A++LL+ M+ +G  P ++T+  LI+  C+ G +  A+ + E M +   +PN + YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +++G CK+  +D A   L+     G   D +TYNT++     +GK+ +A  + +++ + 
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G +   + YN +I+ L K G   +A +L+  M    + PD +TY++LV   S+    +E 
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
           I+   +    G+ P+  T+N+I+
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIM 526



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 235/473 (49%), Gaps = 9/473 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
            +FLE ++    +    P     L+R   ++G T  A  +++ L+  G    +  +N  +
Sbjct: 122 FKFLENMVYHGNVPDIIPCT--TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           S   K  EI     +   M       +V T+N ++ +LC   KL++A+ +  RML+   +
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V+ + ++I   C+   +  A+KL  +M         P+ VT+N ++NG CK GR++ A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEM---RDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M  +G   NV T+  ++      G   +A +L  +M+++G  P+ V +N  I++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L  +G +  A+ +L  M      P+  +Y+ L  G C+   + +A +   +++      D
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +YN ++  LCK   +  A ++L+ +  +G  P +ITY T+IDG  K G    A+++ +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M+  + KP+ + Y+S++ GL ++  +D A       +R+G+  +A+T+N+++ G   + 
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +   A      M N G   N+  Y ILI  L   G  ++A EL+  +   G++
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 207/421 (49%), Gaps = 7/421 (1%)

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           +Y  + S      V  N  + +  + G+LE   K    M V  G+  +P+ +    +I G
Sbjct: 90  HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENM-VYHGN--VPDIIPCTTLIRG 146

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           FC+LG+   A +I   +  +G   +V TY  +I GY + G    AL + D M    + P+
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPD 203

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V YN+ +  L   G ++ A+ VL  M+ +   PD  TY+IL +  CR+  V  A KL +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ +     D  +YN+L+N +CK   L  A + L+ M   G  P++IT+  ++   C  G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
               A ++  +M +    P++V +N +IN LC+   L  A  +L+   + G   ++++YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            L++G+    K+  A      M + G   + V YN ++  LCK G  + A E++  +   
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G  P  +TY T++   +K     + I+L D+M    + PD  TY++++  L  E   ++ 
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503

Query: 658 V 658
           +
Sbjct: 504 I 504


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 255/530 (48%), Gaps = 26/530 (4%)

Query: 72  KSPKLALEFYTWVGENN-RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           K   LA E +  +      F HS+ +  A++ +    +R  +A  L+ N ++   +  +E
Sbjct: 36  KDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVE 95

Query: 131 FLEGLLDSYEICKATPAVFDALVR--------------------ACTQIGATEGAYDVIQ 170
               L+  Y + +     F A++R                       + G    A D  +
Sbjct: 96  TWNVLITGYCLAREPEEAF-AVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 154

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
                G ++ IH +   +  L K  +I     L +++ + G    + T+N ++  LCK  
Sbjct: 155 TTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMG 214

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +LEEA+ L  +++ +G  P+VV +  +I+   +      A KLF++M +     ++ ++V
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG---LVLDTV 271

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +  +I G  + G++  A  +   M   G   +V T +T+IDG  + G    A+R+   M
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
             RGL PN VVY++ IH L     ++ AL +L+ M      PD  TY+IL  GLC++G V
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           + A    +++LE     D Y+YNIL++  CK+ N  AA  +   M      P+++TYGTL
Sbjct: 392 EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTL 451

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I G CK   +  A   +++MK+    P+  +Y+S+++GLCK   L+    L    +R G+
Sbjct: 452 ISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            ++ T   LI       ++ EA ++F+ +R  G+  +   YN +I+ L K
Sbjct: 512 ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISTLIK 560



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 224/451 (49%), Gaps = 5/451 (1%)

Query: 201 WKLYKEMVSC--GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           W+L++ + S   G+  +V+T N ++    +  +  EA +L    L +   P+V  +N++I
Sbjct: 42  WELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLI 101

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              C   + E A  + R+M    G  V P+  THN +++G CK G+V  A +        
Sbjct: 102 TGYCLAREPEEAFAVIREMEEDYG--VAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTN 159

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   ++ TY  ++D  A+    ++A+ L +++   G  P    YN+ ++ L   G +E A
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
           + +L  ++D    PD  TY+ L  GL +     +A+KL  ++    +V D   Y  LI  
Sbjct: 220 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           L ++  +  A  +  +M  +G +PD++T  T+IDG CK G I  AV+++++M+     PN
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339

Query: 499 LVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
            V+Y+++I+GLCK   +D A  +L Q  +     D ITYN LI+G   +G +  A A F 
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   G   +   YNIL++  CK G    A  +   M      P+ VTY TL++   K  
Sbjct: 400 EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              +       M   G  PD+  Y++++  L
Sbjct: 460 QLTKASLYFQHMKERGCPPDSFVYSSLVDGL 490



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 215/464 (46%), Gaps = 25/464 (5%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPK-LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           +APSL     N V+    KS K LA   +      N  +  + +  AIV  L   ++  D
Sbjct: 126 VAPSLKTH--NLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQD 183

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           A+ LM  + +AN  +P                T A ++AL+    ++G  E A D+++K+
Sbjct: 184 AVALMEKI-TANGCTP----------------TIATYNALLNGLCKMGRLEEAIDLLRKI 226

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
              G +  +  + + +  L K       +KL+KEM   G V +   +  +I  L +  K+
Sbjct: 227 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKI 286

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
            +A S+Y  M   G  P+VV  + +I+  C+ G +  A+++F+ M       + PN V +
Sbjct: 287 PQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM---EARGLAPNEVVY 343

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           + +I+G CK  +++ A E+   M KA    +  TY  LIDG  + G  E A    DEM++
Sbjct: 344 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 403

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+   YN  +      G+ + A  V  DM   H  P+  TY  L  GLC+   + +
Sbjct: 404 AGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTK 463

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A      + E     D++ Y+ L++ LCKS  L     L   M   G + +  T   LI 
Sbjct: 464 ASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIF 522

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             CK   ++ AV ++  ++K E  P+   YNSII+ L K A ++
Sbjct: 523 HLCKANRVDEAVSLFNAIRK-EGMPHPYAYNSIISTLIKSAKVN 565



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 2/222 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           ++ N L++   ++     A  LL + +    +PD+ T+  LI GYC     E A  V   
Sbjct: 60  HTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIRE 119

Query: 490 MKK-VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFING 547
           M++     P+L  +N +++GLCK   + AA    + +   G  +D  TY  +++    N 
Sbjct: 120 MEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNK 179

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           KI +A A+  ++   G       YN L+N LCK G  ++A +L++ ++ +G  PD VTYT
Sbjct: 180 KIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 239

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +L+    K     E  +L  +M L G+  D   Y A+I  LL
Sbjct: 240 SLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLL 281


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 241/456 (52%), Gaps = 7/456 (1%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           I  +N+ L+ LVK+N       L++++   G   ++ T  +++   C    +    S+  
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           ++LK G  PN + F  +I   C  G    AL LF    V  G  +  + V++  ++NG C
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEAL-LFHDHVVAHGFKL--DQVSYAILMNGLC 126

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K+G    A ++   + K  ++ +V  Y+T+ID   +G    +A RL  EM+ +G+ PN  
Sbjct: 127 KMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            ++  +  L  +   + A+ +L+ M+ K + P+  TY  +  G C    V +A  + N +
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           ++E +  + + YNI+IN LCK   +  A  L   M  + + PD++TY  LIDG CK G I
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI 303

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTL 539
             ++++ + M+ + K  +++ YNS+++ LCK+  LD A +L++  +  G+   + TY TL
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+G   +G++ +A+ +F E+   G  +    YN++IN LCK G + +A  L+  M  +  
Sbjct: 364 IDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNAC 423

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           IPD V+Y T++   S+     +  +L   M++ G+S
Sbjct: 424 IPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 212/408 (51%), Gaps = 7/408 (1%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           ML+    P ++ FN I+    ++     A+ LFR++     + + P+ VT   ++N +C 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEF---NGIKPSIVTLTILMNCYCH 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            G + F   I   ++K G + N  T+ TLI G    G + EAL   D +V  G   + V 
Sbjct: 58  TGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVS 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           Y   ++ L   G+   A+ +L       +  D   YS +   LC+   V  A++L+++++
Sbjct: 118 YAILMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI 174

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
            + +  + Y+++IL++ LCK      A  LL+ M+ +G+ P+++TYG ++DGYC    + 
Sbjct: 175 AKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A+ ++  M +   +PN+  YN IINGLCK   +D A +L +      +  D +TYN LI
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILI 294

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    GKI+ +  +  EMR++G  V+ + YN L++ LCK     QA  L+K +   GI 
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           P+  TYTTL+    K+   E+   +  +++  G      TYN +I+ L
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 225/458 (49%), Gaps = 9/458 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +  F+ ++ +  +I     A  + ++L+  G   SI      ++       I   + 
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +  +++  GY  N  TF  +I  +C   +  EAL  +  ++  G   + V + +++N  C
Sbjct: 67  ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++G+   A+++ RK  V +      + V ++ II+  CK   V  A  +   MI  GI  
Sbjct: 127 KMGETRAAMQMLRKTWVNA------DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV T++ L+D   +    ++A+ L   M+K+G+ PN V Y + +        V  AL + 
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           + M+ + + P+ + Y+I+  GLC+   V +A  L  ++  + +  D  +YNILI+ LCK 
Sbjct: 241 NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKL 300

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             ++ + +L+  M   G   DIITY +L+   CK  +++ A+ + + +K    +PN+  Y
Sbjct: 301 GKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTY 360

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+GLCKD  L+ A  + Q     G  +   TYN +ING    G   EA A+ S M +
Sbjct: 361 TTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMED 420

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
                + V Y  +I  L + G   +  +L+  MI+ G+
Sbjct: 421 NACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 216/432 (50%), Gaps = 9/432 (2%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K      A+SL+ ++  +GI P++V   +++N  C  G + F   +  K+ 
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M  +   PNS+T   +I G C  G+   A      ++  G   +  +YA L++G  + G
Sbjct: 73  KMGYE---PNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD-VEGALFVLSDMIDKHICPDHFTY 397
            +  A+    +M+++  +  +VV  STI     +G  V  A  + S+MI K I P+ +T+
Sbjct: 130 ETRAAM----QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTF 185

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           SIL   LC++   KQA  L   ++++ +  +  +Y  +++  C  N +  A  + + M+ 
Sbjct: 186 SILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQ 245

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G+ P++  Y  +I+G CK   ++ A+ +++ M   +  P++V YN +I+GLCK   +  
Sbjct: 246 EGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIST 305

Query: 518 AKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           +  L+   + IG  +D ITYN+L++    N  + +A  +  E+++ GI  N   Y  LI+
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLID 365

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK G  + A  + + ++  G      TY  ++    K    +E + L   M  +   P
Sbjct: 366 GLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIP 425

Query: 637 DNQTYNAIISPL 648
           D  +Y  II  L
Sbjct: 426 DAVSYETIIYAL 437



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 115/226 (50%), Gaps = 2/226 (0%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +  IL+N  C +  +     +L+ ++  G  P+ IT+ TLI G C  G    A+  ++++
Sbjct: 47  TLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHV 106

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
                K + V Y  ++NGLCK     AA  +L+ +      D + Y+T+I+       + 
Sbjct: 107 VAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNA--DVVMYSTIIDSLCKGKFVT 164

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A+ ++SEM   GI  N   ++IL++ LCK    +QA  L+ +M+  G+ P+ VTY  ++
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIM 224

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +       + + + + MV  GV P+   YN II+ L  +K  ++
Sbjct: 225 DGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDE 270


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 239/504 (47%), Gaps = 20/504 (3%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV- 208
           +A VR     G  +G    +Q+++++G   +  A    +    +     R  K +   V 
Sbjct: 59  EAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVH 118

Query: 209 --SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
              C        +N +I AL +E  +   + +Y  M K G+ PNV  +N+++   CQ   
Sbjct: 119 DLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNR 178

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A K+  +M   +     P+ VT+  I++  CKL R++ A E+  AM          +
Sbjct: 179 VGAARKMLDEM---ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAA-----S 230

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  ++    R    +E   +  +MV RGL PN + Y + +      G++  A  +L+ M+
Sbjct: 231 YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMV 290

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                P+  T++ L +GL  +G V  A  +   ++ E       SYNILI  LC   +L 
Sbjct: 291 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLK 350

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +L+SM   G  P++ TY TLIDG+ K G++ GA+ ++ +M +   KPN+V+Y +++
Sbjct: 351 GASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMV 410

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLD-----AITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +  CK    + AKSL+       LL+      +T+NTLI       ++  A  +F EMR 
Sbjct: 411 DVFCKKLMFNQAKSLIDKM----LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 466

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   N   YN LI+ L + G    A  ++  M  HGI    VTY T+V+   +     E
Sbjct: 467 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 526

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
            +     M++ G+ P+  T++AII
Sbjct: 527 AMVFVGKMIVQGIQPNAFTFSAII 550



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 235/504 (46%), Gaps = 23/504 (4%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           + DAL+R    +GA    YD ++K    G   ++  +N  +  L + N +G   K+  EM
Sbjct: 134 LIDALLRE-NMVGAVVLVYDNMRK---DGVHPNVFTYNLLVRALCQNNRVGAARKMLDEM 189

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  T+  ++  LCK  +L+EA  +   M      P    +N I+   C+    
Sbjct: 190 ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCR---- 240

Query: 268 EFALK-LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           EF ++ +F  +  M G  + PN +T+  I++ FCK G +  A  I   M+  G   NV T
Sbjct: 241 EFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVT 300

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L+ G    G   +AL +   MV  G  P+ V YN  I  L + GD++GA  +L+ M 
Sbjct: 301 FTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM- 359

Query: 387 DKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           ++H C P+  TYS L  G  + G +  A  + N +       +   Y  +++  CK    
Sbjct: 360 EQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMF 419

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             AK L+  M++    P+ +T+ TLI   C    +  A+ V+  M++    PN   YN +
Sbjct: 420 NQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNEL 479

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+GL ++ +   A  ++   Q  G+ L  +TYNT+++G        EA     +M   GI
Sbjct: 480 IHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGI 539

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N   ++ +I+  CK G  + A  ++  M +     + + YT L+      C+ +++++
Sbjct: 540 QPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL---CNQDKLVD 596

Query: 625 LHD---DMVLSGVSPDNQTYNAII 645
                  M+  G+ P+  T+N ++
Sbjct: 597 AMTYLLKMLYEGIYPNTVTWNVLV 620



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 229/497 (46%), Gaps = 23/497 (4%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF  + LVRA  Q      A  ++ ++  KG       +   +S L KL+ +    ++
Sbjct: 161 PNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 220

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
              M          ++N ++ ALC+E +++E  S+   M+  G+ PNV+ +  I++  C+
Sbjct: 221 LAAMPPVAA-----SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCK 275

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G+L  A  +  +M V++G +  PN VT   ++ G    GRV  A ++   M+  G   +
Sbjct: 276 AGELRMACAILARM-VITGCT--PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 332

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y  LI G    G  + A  + + M + G  PN   Y++ I      GD+ GA+ + +
Sbjct: 333 TVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWN 392

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           DM      P+   Y+ +    C+     QA  L +++L E+   +  ++N LI  LC   
Sbjct: 393 DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCR 452

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  +   M   G +P+  TY  LI G  + GN   A+ +   M+    + +LV YN
Sbjct: 453 RVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYN 512

Query: 504 SIINGLC-----KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           ++++GLC     ++A +   K ++Q  Q     +A T++ +I+ Y   G++  A  M   
Sbjct: 513 TVVSGLCQTRMSREAMVFVGKMIVQGIQP----NAFTFSAIIHAYCKEGEVRMAAWMLGA 568

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M  V    N + Y IL+  LC       A   +  M+  GI P+ VT+  LV    +N  
Sbjct: 569 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 628

Query: 619 ---PEEVIELHDDMVLS 632
              P + I+ H  M LS
Sbjct: 629 CIEPSDFIQ-HITMNLS 644



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 197/428 (46%), Gaps = 7/428 (1%)

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAV---FDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           A  VS L  L+ L ++ E+  A P V   ++A+V A  +    +  + V+  +  +G   
Sbjct: 202 ATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQP 261

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++  +   +    K  E+     +   MV  G   NV TF  ++  L  + ++ +AL ++
Sbjct: 262 NVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMW 321

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M+  G  P+ V +N++I   C VGDL+ A  +      M      PN  T++ +I+GF
Sbjct: 322 RWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS---MEQHGCFPNVRTYSTLIDGF 378

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            K G +  A  I   M ++G   NV  Y  ++D + +     +A  L D+M+     PN 
Sbjct: 379 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 438

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V +N+ I  L     V  AL V  +M      P+  TY+ L  GL R G    A  +  +
Sbjct: 439 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 498

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +    +     +YN +++ LC++     A   +  MIV+G+ P+  T+  +I  YCK G 
Sbjct: 499 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 558

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLC-KDASLDAAKSLLQASQRIGLLDAITYNT 538
           +  A  +   M  V    N+++Y  ++  LC +D  +DA   LL+        + +T+N 
Sbjct: 559 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 618

Query: 539 LINGYFIN 546
           L+ G F N
Sbjct: 619 LVRGVFRN 626



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 164/360 (45%), Gaps = 13/360 (3%)

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR-----L 346
           H   +      G V+  +     M   G+ C        +  +AR G+ + AL+     +
Sbjct: 58  HEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAV 117

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D    R   P   +YN  I  L  E  V   + V  +M    + P+ FTY++L + LC+
Sbjct: 118 HDLGCARPTEPR--LYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQ 175

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           N  V  A K+ +++  +    D  +Y  +++ LCK + L  A ++L++M      P   +
Sbjct: 176 NNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAAS 230

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  ++   C+   ++    V  +M     +PN++ Y +I++  CK   L  A ++L    
Sbjct: 231 YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMV 290

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G   + +T+  L+ G F +G++ +A  M+  M   G A + V YNILI  LC  G  +
Sbjct: 291 ITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLK 350

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  ++  M  HG  P+  TY+TL+  FSK       I + +DM  SG  P+   Y  ++
Sbjct: 351 GASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMV 410



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/380 (23%), Positives = 171/380 (45%), Gaps = 41/380 (10%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M K G+  NV TY  L+    +      A ++ DEM ++G  P++V Y + +  L     
Sbjct: 154 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 213

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  VL+ M      P   +Y+ +   LCR   +++ F + + ++   +  +  +Y  
Sbjct: 214 LDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 268

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +++  CK+  L  A  +L+ M++ G  P+++T+  L+ G    G +  A+ ++  M    
Sbjct: 269 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 328

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAF 553
             P+ V YN +I GLC    L  A S+L + ++ G    + TY+TLI+G+   G +  A 
Sbjct: 329 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAI 388

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL----------------- 596
           +++++M   G   N V Y  +++  CK   + QA+ L+  M+L                 
Sbjct: 389 SIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 448

Query: 597 ------------------HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
                             HG +P+  TY  L+    +  +  + + +  +M   G+    
Sbjct: 449 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 508

Query: 639 QTYNAIISPLLGEKSAEDQV 658
            TYN ++S L   + + + +
Sbjct: 509 VTYNTVVSGLCQTRMSREAM 528



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 169/393 (43%), Gaps = 17/393 (4%)

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           A  V  ++ AL+  R  GV   +  L  +V        F + G  + A +  Y  +   +
Sbjct: 68  AGDVDGVQLALQEMRLRGVPCTEGALVAAV------GAFARAGAPDRALKTFYRAVH-DL 120

Query: 321 DC----NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
            C      R Y  LID   R       + + D M K G+ PN   YN  +  L     V 
Sbjct: 121 GCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVG 180

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +L +M  K   PD  TY+ +   LC+   + +A     +VL   M   A SYN ++
Sbjct: 181 AARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEA----TEVLAA-MPPVAASYNAIV 235

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LC+   +     ++S M+ RGL P++ITY T++D +CK G +  A  +   M      
Sbjct: 236 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 295

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
           PN+V + +++ GL  D  +  A  + +     G   + ++YN LI G    G +  A ++
Sbjct: 296 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI 355

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            + M   G   N   Y+ LI+   K G    A  +   M   G  P+ V YT +V  F K
Sbjct: 356 LNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCK 415

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                +   L D M+L    P+  T+N +I  L
Sbjct: 416 KLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 448



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 11/292 (3%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           + + +  L A GDV+G    L +M  + +               R G   +A K   + +
Sbjct: 58  HEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAV 117

Query: 422 EEHMVGDAYS-----YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             H +G A       YN LI+ L + N + A   +  +M   G+ P++ TY  L+   C+
Sbjct: 118 --HDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQ 175

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITY 536
              +  A ++ + M +    P+ V Y +I++ LCK   LD A  +L A   +    A +Y
Sbjct: 176 NNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPV----AASY 231

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N ++       ++ E F++ S+M   G+  N + Y  +++  CK G  + A  ++  M++
Sbjct: 232 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVI 291

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            G  P+ VT+T LV     +    + +++   MV  G +P   +YN +I  L
Sbjct: 292 TGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 343


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 255/536 (47%), Gaps = 43/536 (8%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSV----SIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           ++++AC  +       D ++++    + +    S+ ++N  L  L +   I    ++Y E
Sbjct: 145 SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTE 204

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M++   V N+ T N ++ A  K   + EA     ++ ++G+ P+   +  +I   C+  D
Sbjct: 205 MLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNND 264

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE--------FAEEIRYAMIKA 318
           +  A K+F    +M       N V++  II+G C+ GR++          E+  Y  ++ 
Sbjct: 265 VNSAYKVF---NMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRT 321

Query: 319 ----------------GIDC-----------NVRTYATLIDGYARGGSSEEALRLCDEMV 351
                           G+D            NV TY  ++D   +    +E+ R+ +EM+
Sbjct: 322 YTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM 381

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++GL+P+ V YN+ I     EG +E AL +L  M   +  P+  TY+ L  G  +   V 
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L +++LE  +     +YN LI+  CK+ +  +A +LL  +   GL+PD  TY   I
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D  CK   +E A  ++ ++K+   K N V+Y ++I+G CK   +D A SLL+       L
Sbjct: 502 DTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCL 561

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            ++ TYN+LI G    GK+ E  +M   M  +G+      Y ILI  + + G +  A  +
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              M+  G  PD  TYT  +  +  + + +E   +   M+ +GV PD+ TY  +IS
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLIS 677



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 245/507 (48%), Gaps = 8/507 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             + +V A +++G    A   + K+   G S     + + +    + N++   +K++  M
Sbjct: 216 TLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMM 275

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G   N  ++  +I+ LC+  +++E +SL+ +M +   +P V  + +II+        
Sbjct: 276 PNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRN 335

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
              + LF +M   S +   PN  T+  +++  CK  +++ +  I   M++ G+  +V TY
Sbjct: 336 LEGMDLFNEMRERSCE---PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI GY   G  E AL +   M      PN   YN  I        V  A+ +LS M++
Sbjct: 393 NALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLE 452

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P   TY+ L    C+ G    A+KL + + E  +V D ++Y++ I+ LCKS  +  
Sbjct: 453 SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEE 512

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L +S+  +G+  + + Y  LIDG+CK G I+ A+ + E M   +  PN   YNS+I 
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G+CK+  +    S+++   ++G+   + TY  LI      G    A  +F++M + G   
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y   I+  C  G  ++A  +M  MI  G++PD +TYT L++ + +     +   + 
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692

Query: 627 DDMVLSGVSPDNQTYNAII----SPLL 649
             M+ +G  P +  +N +I    SP L
Sbjct: 693 KRMLDAGCDPSHPIWNNLIWYKASPFL 719



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 220/439 (50%), Gaps = 6/439 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V ++N ++  L +   ++E   +Y  ML   I PN+   N ++N   ++G++  A  L+
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA-NLY 236

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
                 +G S  P+S T+  +I G+C+   V  A ++   M   G   N  +Y T+I G 
Sbjct: 237 VSKIFQAGLS--PDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL 294

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA-EGDVEGALFVLSDMIDKHICPD 393
              G  +E + L  +M +    P    Y   IH LF  + ++EG + + ++M ++   P+
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG-MDLFNEMRERSCEPN 353

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+++   +C+   + ++ ++ N+++E+ +V    +YN LI   C+   + AA ++L 
Sbjct: 354 VHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILG 413

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M      P+  TY  LI G+ K  ++  A+ +   M + +  P+LV YNS+I+  CK  
Sbjct: 414 LMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
             D+A  LL   +  GL+ D  TY+  I+    + ++ EA  +F+ ++  GI  N+V Y 
Sbjct: 474 HFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYT 533

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G   +A  L++ M     +P+  TY +L+    K    +E + + ++M   
Sbjct: 534 ALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKM 593

Query: 633 GVSPDNQTYNAIISPLLGE 651
           GV P   TY  +I  +L E
Sbjct: 594 GVKPTVATYTILIEEMLRE 612



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/138 (16%), Positives = 68/138 (49%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C    + +++L+    + G  +    +++ +   G   ++  +   +  +++  +   
Sbjct: 558 EDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDH 617

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             +++ +MVS G+  +V T+   I+  C    ++EA  +  RM+++G+ P+ + + ++I+
Sbjct: 618 ANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLIS 677

Query: 260 EACQVGDLEFALKLFRKM 277
              ++G    A  + ++M
Sbjct: 678 AYERLGLAYDAFNVLKRM 695


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 215/419 (51%), Gaps = 18/419 (4%)

Query: 242 MLKSGIWPNVVCFNMIIN---EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           M ++G  PN V FN ++N   +  + GD E      R +  M+   + PN V++N ++ G
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCE------RLLETMAARGIQPNVVSYNGLLEG 54

Query: 299 FCKLGRVEFAEEIRYAMIKAG--IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            CKL R   AEE+   MI  G     ++ TY+TL+ GY + G  EE+  L  E++ RGL 
Sbjct: 55  LCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLR 114

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ ++Y   +  L     +  AL +L +MI    CP   T++ L  G CR   ++ A  L
Sbjct: 115 PDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
              +    +  D  +YN L++ LCK+  L  A+QLL  M   G  PD++ Y + + G CK
Sbjct: 175 LQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCK 234

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAI 534
            G +  A QV E M+  +  PN+V YN+I++GLCK   +D A  +++  AS     L+ +
Sbjct: 235 SGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y+T+++G    G+  EA ++   M   G   + V Y+ L+N LCK G  ++A E ++ M
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN-----QTYNAIISPL 648
            + G  P+ VTY +LV          E   + ++M   G   D+      TYNA+I  L
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGL 413



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 224/455 (49%), Gaps = 12/455 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ALV   ++ G       +++ +  +G   ++ ++N  L  L KL       
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 202 KLYKEMVSCG--YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
           +L ++M+S G     ++ T++ ++   CK  K+EE+  L   ++  G+ P+ + +  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+   L  AL+L  +M + +G    P  +T N +I+G C+   +E A+ +   M  +G
Sbjct: 126 SLCKSARLGEALELLEEM-IRAG--CCPTLITFNTLISGCCREKNLEMADSLLQTMAASG 182

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V TY TL+DG  + G  +EA +L + M   G  P+ V Y+S ++ L   G V  A 
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAH 242

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-DAYSYNILINY 438
            VL  M D    P+  TY+ +  GLC++G +  A ++  Q+      G +   Y+ +++ 
Sbjct: 243 QVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDG 302

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LCK      A+ ++ +M   G  PD++TY +L++G CK G IE AV+    M     KPN
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL------DAITYNTLINGYFINGKIAEA 552
            V Y S+++GLC    L  A+ +++     G           TYN LI G    G+I +A
Sbjct: 363 AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDA 422

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
              F  MR+ G   + V Y+ ++  L + G   QA
Sbjct: 423 LKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 183/376 (48%), Gaps = 39/376 (10%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PNSVT N ++NGF K GR    E +   M   GI  NV +Y  L++G  +     EA  L
Sbjct: 8   PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67

Query: 347 CDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
             +M+ RG    P+ V Y++ +      G VE +  +L ++I + + PD   Y+ +   L
Sbjct: 68  VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C++  + +A +L  +++         ++N LI+  C+  NL  A  LL +M   G+  D+
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDAAKSLLQ 523
           +TY TL+DG CK G ++ A Q+ E MK     P++V Y+S + GLCK    L+A + L Q
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQ 247

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV-GIAVNKVGYNILINFLCKFG 582
                   + +TYNT+++G   +GKI  A  M  +M +  G  +N VGY+ +++ LCK G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             Q+AR +M+                                    M  +G  PD  TY+
Sbjct: 308 RTQEARSVMEA-----------------------------------MARAGCRPDVVTYS 332

Query: 643 AIISPLLGEKSAEDQV 658
           ++++ L      E+ V
Sbjct: 333 SLVNGLCKAGKIEEAV 348


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 220/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        + HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR   VM    V P+  TH+ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD++    ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    PN V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXV 417



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 150/278 (53%), Gaps = 1/278 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  ++ K G+  +V ++ TL++GY + G  +E  RL   M  
Sbjct: 140 NILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   ++  I+ L  E  ++ A  +  +M+B  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L     L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + +   Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
            I TY  +IN +   G +     +  EM+  G   N V
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXV 417



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 141/280 (50%), Gaps = 1/280 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L + + 
Sbjct: 139 FNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y++++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y  M      P+L+ YN++I GLCK   L     L+      GL  D ITY TLI
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++   Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           P+  TYT ++  F K        +L  +M   G  P+  T
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++  CK   +  A+ +  S+   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  ++ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +Q  +
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   K  +L    +L S 
Sbjct: 137 YFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ T+  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +      LL D ITYNTLI G    G + +   +  EM   G+  +K+ Y  
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A E  K MI   I  D   YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + P+  TY  II+
Sbjct: 377 LKPEIGTYTMIIN 389


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 165/677 (24%), Positives = 309/677 (45%), Gaps = 50/677 (7%)

Query: 15  PLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWK---ILEQMAPSLTNSLVNRVVSEFR 71
           P +  F V  + +  S++ +    +   L+   W+    L+ +   ++ ++ ++V+S  R
Sbjct: 21  PYNAFFSVSSRPSQFSSDQVAAHNVASLLKSPNWEKNSSLKSLVSHMSPNVASQVISLQR 80

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
               + + F+ WV +++ +         ++ L+V+   F  A  ++  L+   S    E 
Sbjct: 81  SDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEM 140

Query: 132 LEGLLDSYEICKATPAV------FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           L+ L+  ++  +           + +L+ +  ++     AY   ++++  G  V +  + 
Sbjct: 141 LK-LISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYR 199

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             ++ L K            +++  G++ + +    ++   C+   L +AL ++  M + 
Sbjct: 200 TIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSRE 259

Query: 246 GIW-PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           G   PN V ++++I+  C+VG LE A  L  +MG        P++ T+  +I   C  G 
Sbjct: 260 GTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG---EKGCQPSTRTYTVLIKALCDRGL 316

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++ A  +   MI  G   NV TY  LIDG  R G  EEA  +C +MVK G+ P+ + YN+
Sbjct: 317 IDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNA 376

Query: 365 TIHWLFAEGDV--------------------------EG---------ALFVLSDMIDKH 389
            I+    +G V                          EG         A+ +L  M+D  
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  +Y++L  GLCR G +  A+KL   +    +  D  ++  +IN  CK      A 
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVAS 496

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             L  M+ +G+  D +T  TLIDG C  G    A+ + E + K+         N I++ L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDML 556

Query: 510 CKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            K   L    ++L    ++GL+ ++ TY TL++G   +G I+ +F M   M+  G   N 
Sbjct: 557 SKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNV 616

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             Y I+IN LC+FG  ++A +L+  M   G+ P++VTYT +V  +  N   +  +E    
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676

Query: 629 MVLSGVSPDNQTYNAII 645
           MV  G   +++ Y++++
Sbjct: 677 MVERGYELNDRIYSSLL 693



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 253/528 (47%), Gaps = 14/528 (2%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           LL+G     N    L+  + L+     C      +  L+    ++G  E A+ +  ++  
Sbjct: 236 LLLGFCRGLNLRDALKVFD-LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG   S   +   +  L     I + + L+ EM++ G   NV+T+ ++I  LC++ K+EE
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEE 354

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  +  +M+K GI+P+V+ +N +IN  C+ G +  A +L   + VM   +  PN  T N 
Sbjct: 355 ANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFEL---LTVMEKRACKPNVRTFNE 411

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++ G C++G+   A  +   M+  G+  ++ +Y  LIDG  R G    A +L   M    
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L P+ + + + I+    +G  + A   L  M+ K I  D  T + L  G+C  G  + A 
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +   +++  M+   +S N++++ L K   L     +L  +   GL+P ++TY TL+DG 
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
            + G+I G+ ++ E MK     PN+  Y  IINGLC+   ++ A+ LL A Q  G+  + 
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN--FLCKFGCYQQARELM 591
           +TY  ++ GY  NGK+  A      M   G  +N   Y+ L+    L + G  +   E +
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECI 711

Query: 592 KVMI-----LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           K +I     L G       +  LVTR  K    +E   L   ++ SGV
Sbjct: 712 KELISVVEQLGGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGV 757



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 226/492 (45%), Gaps = 51/492 (10%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKL--EEALSLY--YRMLK--SGIWPNVVCFN 255
           +L K +VS G     +    VI AL +EC    +E L L   +  L+  SG   N  C++
Sbjct: 108 QLLKLIVSSGLFRVAHD---VIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYS 164

Query: 256 MIINEACQVGDLEF-ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            ++    ++ DL F A   +R+M     D  +   + +  I+N  CK G  E AE     
Sbjct: 165 SLLMSLAKL-DLGFLAYVTYRRM---EADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCK 220

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL-MPNNVVYNSTIHWLFAEG 373
           ++K G   +     +L+ G+ RG +  +AL++ D M + G   PN+V Y+  IH L   G
Sbjct: 221 ILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVG 280

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +E A  +   M +K   P   TY++L K LC  G + +AF L ++++      + ++Y 
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYT 340

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           +LI+ LC+   +  A  +   M+  G+ P +ITY  LI+GYCK G +  A ++   M+K 
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400

Query: 494 EKKPN-----------------------------------LVIYNSIINGLCKDASLDAA 518
             KPN                                   +V YN +I+GLC++  ++ A
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVA 460

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL +     L  D +T+  +IN +   GK   A A    M   GI++++V    LI+ 
Sbjct: 461 YKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           +C  G  + A  +++ ++   ++    +   ++   SK C  +E + +   +   G+ P 
Sbjct: 521 VCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPS 580

Query: 638 NQTYNAIISPLL 649
             TY  ++  L+
Sbjct: 581 VVTYTTLVDGLI 592



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 154/340 (45%), Gaps = 2/340 (0%)

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           +G   N   Y++L+   A+      A      M   G +   + Y + ++ L   G  E 
Sbjct: 154 SGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-DAYSYNILI 436
           A   +  ++      D    + L  G CR   ++ A K+ + +  E     ++ SY+ILI
Sbjct: 214 AEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILI 273

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + LC+   L  A  L   M  +G  P   TY  LI   C  G I+ A  +++ M     K
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCK 333

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
           PN+  Y  +I+GLC+D  ++ A  + +   + G+  + ITYN LINGY  +G++  AF +
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFEL 393

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            + M       N   +N L+  LC+ G   +A  L+K M+ +G+ PD V+Y  L+    +
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
                   +L   M    + PD  T+ AII+    +  A+
Sbjct: 454 EGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKAD 493



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 2/160 (1%)

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFS 557
           ++ Y +I+N LCK+   +AA+  +    ++G LLD+    +L+ G+     + +A  +F 
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFD 254

Query: 558 EMRNVGI-AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            M   G  A N V Y+ILI+ LC+ G  ++A  L   M   G  P   TYT L+      
Sbjct: 255 LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              ++   L D+M+  G  P+  TY  +I  L  +   E+
Sbjct: 315 GLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEE 354


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 225/434 (51%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H +   + F +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     +        L HL+KL
Sbjct: 61  ILETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E + CGY  ++  FN++ +  CKE  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+   KL      M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEGFKL---KSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  ++ +M  K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A++++  M+  GL PD  TY  +I+  CK G++    ++ + M+   
Sbjct: 358 LISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HAPSVVTYNVLMNG 431



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E ++ G   +   +N   H    EGD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + FKL + +    +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L+ A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++M+ M+  G+ PD  TYT ++    K     +  +L  +M   G +P   TYN +++
Sbjct: 371 AEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMN 430



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 158/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N + + FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  +L   M  
Sbjct: 146 NILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +++    +GL  
Sbjct: 326 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN     G + +   +  EM+  G A + V YN+L+N
Sbjct: 386 DTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMN 430



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL +  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M      P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G   QA +
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHD 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 230/438 (52%), Gaps = 7/438 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  T+ ++I        L+ A+ L   M  +G   N V    ++   C  G +  AL+ F
Sbjct: 8   NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF 67

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R M         P+ +T+  +++  CK G+ + A+ +   MI  G   +  T++TLIDG 
Sbjct: 68  RAMA----KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE-GDVEGALFVLSDMIDKHICPD 393
            + GS E+A R+ +++++RG+  ++  + + I  L  +   VE A  VL  +I K   P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              ++++  G C+   +  A+KL   ++E+  V + +++ ILI  LCK+N +  A+QLL 
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+  G  P+++TY T+I+G CK G ++ A ++++ M++    PN+V +N +I+GLCK  
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI-AVNKVGY 571
            ++ A+ L    +  G   D ITYN+LI+G   + ++ EAF +F  +   G+ A N V Y
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTY 363

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           + L +     G    A  +  +++  G  PD  TYT+L+  + K     EV+EL ++M  
Sbjct: 364 STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423

Query: 632 SGVSPDNQTYNAIISPLL 649
            G  P   T +A++  L 
Sbjct: 424 KGFPPRVNTLSAVLGGLF 441



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 272/570 (47%), Gaps = 31/570 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK--------------- 143
           A+VH L    +FD+A  ++  +++            L+D   +CK               
Sbjct: 83  ALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDG--LCKFGSEEQAFRVLEDVI 140

Query: 144 -----ATPAVFDALV-RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
                 + A F+ ++ R C +  + E A  V+  +  KG + ++  +N  ++   K  ++
Sbjct: 141 QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDL 200

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
              +KL + M+  G V NV TF ++I  LCK  ++ EA  L  +M+  G  PNVV ++ +
Sbjct: 201 DSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTV 260

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           IN  C+ G ++ A +LF+   +M   +  PN VTHN +I+G CK  R+E A ++ + M +
Sbjct: 261 INGLCKQGQVDDAYELFQ---LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 317

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL-MPNNVVYNSTIHWLFAEGDVE 376
            G   ++ TY +LIDG  +    +EA +L   + + G+   N V Y++  H   A G + 
Sbjct: 318 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 377

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  + S ++DK   PD  TY+ L    C+     +  +L  ++  +       + + ++
Sbjct: 378 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 437

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN-MKKVEK 495
             L + N+   A QL  SM  RG   D + Y  +++G  +      A+ V E  + K ++
Sbjct: 438 GGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDR 497

Query: 496 K--PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEA 552
           K  P+    ++++  LC+    D AK LL      G   A+ +YN L++G     +  EA
Sbjct: 498 KFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEA 557

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +F  M + G A      N++I++LC       A EL++ M   G  PD  T  TL+  
Sbjct: 558 TQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG 617

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
           + K+   +   +L ++M  +G+ P++ T++
Sbjct: 618 YCKSGRADLARKLLEEMTEAGLEPNDTTHD 647



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 185/362 (51%), Gaps = 4/362 (1%)

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +PN  T+  +I GF   G ++ A ++   M   G + N   + TL+ G    G   EAL 
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
               M K    P+ + Y + +H L   G  + A  +L +MI +   PD  T+S L  GLC
Sbjct: 66  HFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC-KSNNLAAAKQLLSSMIVRGLIPDI 464
           + G  +QAF++   V++  M     ++  +I  LC K N++  A ++L  +I +G  P +
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           + +  +I+G+CK  +++ A ++ E M +    PN+  +  +I GLCK   +  A+ LL+ 
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G   + +TY+T+ING    G++ +A+ +F  M       N V +NILI+ LCK   
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ-TYN 642
            ++AR+L   M   G  PD +TY +L+    K+   +E  +L   +  SGVS  N  TY+
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364

Query: 643 AI 644
            +
Sbjct: 365 TL 366



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 3/306 (0%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           R  MPN   Y   I    + GD++ A+ +L +M       +   ++ L KGLC  G V +
Sbjct: 3   RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVE 62

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A + H + + +    D  +Y  L++ LCK+     A+ +L  MI RG  PD +T+ TLID
Sbjct: 63  ALE-HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLID 121

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC-KDASLDAAKSLLQASQRIGLL 531
           G CK G+ E A +V E++ +     +   + +II  LC K  S++ A  +L      G  
Sbjct: 122 GLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFT 181

Query: 532 DAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
             +  +N +ING+     +  A+ +   M   G   N   + ILI  LCK     +A++L
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           ++ M+  G  P+ VTY+T++    K    ++  EL   M      P+  T+N +I  L  
Sbjct: 242 LEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCK 301

Query: 651 EKSAED 656
            K  E+
Sbjct: 302 AKRIEE 307



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 7/195 (3%)

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           + R  +P+  TYG LI G+   G+++ A+Q+ E MK    + N V++ +++ GLC    +
Sbjct: 1   MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60

Query: 516 DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
             A    +A  +    D +TY  L++     GK  EA  M  EM   G A + V ++ LI
Sbjct: 61  VEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD----MVL 631
           + LCKFG  +QA  +++ +I  G+      + T++ R    C+    +EL       ++ 
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRL---CNKYNSVELASKVLGVVIA 177

Query: 632 SGVSPDNQTYNAIIS 646
            G +P    +N +I+
Sbjct: 178 KGFTPTVLMFNLVIN 192


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 226/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L   C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           + ++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  IXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 160/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M V+GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I +++V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D   Y A+IS L 
Sbjct: 304 LIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 218/415 (52%), Gaps = 5/415 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K       LSL  +M   GI PN V FN++IN  CQ+G + FA  +  K+ 
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M  +   P+ +T N  I GFC  G++  A      ++  G   +  +Y TLI+G  + G
Sbjct: 131 KMGYE---PDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 187

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  AL+L   +  + +  N V+YN+ I  +  +  V  A  + S+M+ K I PD  TYS
Sbjct: 188 ETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYS 247

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L +G    G +K A  L N+++ E++  D Y++NIL++  CK   L  AK +L  M+++
Sbjct: 248 ALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQ 307

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            + P++ T+ TL+DG+CK   ++    V+  M K   KPN+V Y S+++G C    ++ A
Sbjct: 308 DIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 367

Query: 519 KSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K +    SQR    +  +YN +ING+    K+ +A  +F EM +  I  + V YN LI+ 
Sbjct: 368 KKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDG 427

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV-IELHDDMVL 631
           LCK G    A +L+  M   G  P+ +TY +++         + +   +H D +L
Sbjct: 428 LCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTIL 482



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 237/470 (50%), Gaps = 16/470 (3%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           +GA  +   L  +  +++   +N  L  LVK         L ++M   G   N  TFN++
Sbjct: 50  DGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNIL 109

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I   C+   +  A S+  ++LK G  P+++  N  I   C  G +  AL    K+ V  G
Sbjct: 110 INCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL-VALG 168

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             +  + V++  +ING CK+G    A ++   +    +  N   Y T+IDG ++     +
Sbjct: 169 FHL--DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A  L  EMV + + P+ V Y++ I   F  G ++ A+ + + MI ++I PD +T++IL  
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G C+ G +K+A  + + ++ + +  +  ++N L++  CK   +   K + + M+ +G+ P
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 346

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-KSL 521
           +++TY +L+DGYC    +  A +++  M +     N+  YN +ING CK   +D A K  
Sbjct: 347 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLF 406

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           ++   +  + D +TYN+LI+G   +GKI+ AF + +EM + G   N + YN ++N     
Sbjct: 407 IEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN----- 461

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
                   L+  +   GI P+  T T L+    ++   E   ++ +D+++
Sbjct: 462 -------ALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLV 504



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 214/421 (50%), Gaps = 4/421 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++ A+SL+  +L          FN I+    +       L L ++M     + + PN VT
Sbjct: 49  VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEF---EGINPNFVT 105

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC+LG + FA  +   ++K G + ++ T  T I G+   G   +AL   D++V
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G   + V Y + I+ L   G+   AL +L  +  K +  +   Y+ +  G+ ++  V 
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            AF L+++++ + +  D  +Y+ LI        L  A  L + MI+  + PD+ T+  L+
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           DG+CK G ++ A  V + M   + KPN+  +N++++G CKD  +   K++     + G+ 
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + +TY +L++GY +  ++ +A  +F+ M   G+  N   YNI+IN  CK     +A +L
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              M    IIPD VTY +L+    K+       +L ++M   G  P+  TYN+I++ LL 
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLT 465

Query: 651 E 651
           +
Sbjct: 466 K 466



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 26/400 (6%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F+ L+    Q+G    A+ V+ K+   G+   I   N F+       +I +    + +
Sbjct: 104 VTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDK 163

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +V+ G+  +  ++  +I  LCK  +   AL L  R+    +  N V +N +I+   +   
Sbjct: 164 LVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKH 223

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A  L+ +   M    + P+ VT++ +I GF  +G+++ A ++   MI   I  +V T
Sbjct: 224 VNDAFDLYSE---MVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYT 280

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L+DG+ + G  ++A  + D M+ + + PN   +N+ +     +  ++    V + M+
Sbjct: 281 FNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMM 340

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + I P+  TY  L  G C    V +A K+ N + +  +  + +SYNI+IN  CK   + 
Sbjct: 341 KQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVD 400

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L   M  + +IPD++TY +LIDG CK G I  A Q+   M    + PN++ YNSI+
Sbjct: 401 KAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL 460

Query: 507 N-----------------------GLCKDASLDAAKSLLQ 523
           N                       GLC+   L+AA+ + +
Sbjct: 461 NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFE 500



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 179/344 (52%), Gaps = 19/344 (5%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA--WNNFLSHLVKLNEIGRFWKLYKE 206
           +  L+    ++G T  A  ++++  V G  V ++A  +N  +  + K   +   + LY E
Sbjct: 176 YGTLINGLCKVGETRAALQLLRR--VDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSE 233

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV+     +V T++ +I       KL++A+ L+ +M+   I P+V  FN++++  C+ G 
Sbjct: 234 MVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGR 293

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A  +   M +     + PN  T N +++GFCK  +++  + +   M+K GI  NV T
Sbjct: 294 LKKAKNVLDMMMI---QDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVT 350

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +L+DGY       +A ++ + M +RG+  N   YN  I+       V+ A+ +  +M 
Sbjct: 351 YCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMH 410

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            KHI PD  TY+ L  GLC++G +  AF+L N++ +     +  +YN ++N         
Sbjct: 411 HKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN--------- 461

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
               LL+ +  +G+ P++ T   LI G C+ G +E A +V+E++
Sbjct: 462 ---ALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDL 502



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 162/323 (50%), Gaps = 23/323 (7%)

Query: 107 WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEIC------KATPAV--FDALVRACTQ 158
            RR D  L+ +  +M    +  +   + + D++++       + +P V  + AL+R    
Sbjct: 196 LRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFI 255

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +G  + A D+  K+ ++     ++ +N  +    K   + +   +   M+      NV+T
Sbjct: 256 VGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVST 315

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++   CK+ K++E  +++  M+K GI PNVV +  +++  C V  +  A K+F    
Sbjct: 316 FNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF---N 372

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            MS   V  N  ++N +INGFCK+ +V+ A ++   M    I  +V TY +LIDG  + G
Sbjct: 373 TMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSG 432

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
               A +L +EM  RG  PN + YNS ++ L            L+ + D+ I P+  T +
Sbjct: 433 KISYAFQLVNEMHDRGQPPNIITYNSILNAL------------LTKLKDQGIQPNMHTDT 480

Query: 399 ILTKGLCRNGCVKQAFKLHNQVL 421
           IL KGLC++G ++ A K+   +L
Sbjct: 481 ILIKGLCQSGKLEAARKVFEDLL 503



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 151/303 (49%), Gaps = 1/303 (0%)

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L+  N +  S+I   F   DV+GA+ + + ++ ++     F ++ +   L ++       
Sbjct: 29  LLQKNFIPYSSISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L  Q+  E +  +  ++NILIN  C+   +  A  +L+ ++  G  PDIIT  T I G+
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDA 533
           C  G I  A+  ++ +  +    + V Y ++INGLCK     AA  LL +   ++  L+A
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + YNT+I+G   +  + +AF ++SEM    I+ + V Y+ LI      G  + A +L   
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           MIL  I PD  T+  LV  F K    ++   + D M++  + P+  T+N ++     ++ 
Sbjct: 269 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRK 328

Query: 654 AED 656
            ++
Sbjct: 329 MKE 331


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 264/523 (50%), Gaps = 19/523 (3%)

Query: 2   FSAFCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNS 61
           F A  N L++    LS+          P   D + R + +    R++  L  ++ S +N 
Sbjct: 54  FLASTNALFRDELKLSQ----------PDLVDRISRLLVL----RRFDALANLSFSFSNE 99

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL- 120
           L++ V+   R +P  +LEF+    +  +F   + S C IVH+L   R + +  + +  L 
Sbjct: 100 LMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELV 159

Query: 121 -MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
            +  N+       + L+  Y     +P VFD +++   + G T+ A  V   +   G   
Sbjct: 160 VLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVP 219

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+ + N+ LS+LV+  E  +   +Y++M++ G + ++ ++ +++ A CKE +++EA +  
Sbjct: 220 SLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFV 279

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M +S   PNVV +N +I+    +GD+  A K+   + +MS   +  NS T+  +I G+
Sbjct: 280 KEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKV---LALMSEKGIPENSRTYTLLIKGY 336

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G++E AE++   M++  +  +   Y  LI  Y   G  ++ALR+ D M+K GL  N 
Sbjct: 337 CKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNT 396

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V+ NS I+     G V  A  VL  M D ++ PD + Y+ L  G C+     +AFKL ++
Sbjct: 397 VICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDE 456

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +  + +     +YN L+  L    ++  A  + + M  RG+ P+ +TY TL+D + K G 
Sbjct: 457 MHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGT 516

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            + A+ ++++        ++ +YN++I G CK   L  A+ + 
Sbjct: 517 FDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 195/397 (49%), Gaps = 18/397 (4%)

Query: 243 LKSGIWPNVV-----------CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + S +W  +V            F+MI+    + G  +FAL +F  MG       +P+  +
Sbjct: 167 IASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGR---VPSLRS 223

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +++   + G    A  +   MI  GI  ++ +Y  +++ Y + G  +EA     EM 
Sbjct: 224 CNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME 283

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +    PN V YNS I    + GDV GA  VL+ M +K I  +  TY++L KG C+ G ++
Sbjct: 284 RSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQME 343

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           QA KL   ++E+++  D + Y +LI+  C +  +  A ++  +M+  GL  + +   +LI
Sbjct: 344 QAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLI 403

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           +GYCK G++  A +V  +MK    KP+   YN++++G CK      A  L       G+ 
Sbjct: 404 NGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVN 463

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
              +TYNTL+   F  G +  A  +++ M   G+A N+V Y  L++   K G + +A  +
Sbjct: 464 FTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMI 523

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            K  +  G       Y T++  F   C  E++++  +
Sbjct: 524 WKDALSKGFTKSITLYNTMICGF---CKMEKLVQAQE 557



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 3/305 (0%)

Query: 348 DEMVK--RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           DE+V   R    +  V++  +     +G  + AL V  +M      P   + + L   L 
Sbjct: 173 DELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLV 232

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           +NG   +A  ++ Q++   ++ D +SY I++N  CK   +  A   +  M      P+++
Sbjct: 233 QNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV 292

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY +LIDGY   G++ GA +V   M +     N   Y  +I G CK   ++ A+ L    
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCM 352

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
               L +D   Y  LI+ Y   G++ +A  +   M  VG+ +N V  N LIN  CK G  
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +A E++  M    + PD   Y TL+  F K     +  +L D+M   GV+    TYN +
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTL 472

Query: 645 ISPLL 649
           +  L 
Sbjct: 473 LKNLF 477


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/601 (25%), Positives = 269/601 (44%), Gaps = 102/601 (16%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +FDAL+ AC + G  E A  +  ++           +   ++ L KL + GR  ++ +EM
Sbjct: 194 MFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM 253

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEAL------------------------------- 236
              G+     T+  ++  L K  ++EEAL                               
Sbjct: 254 KEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEV 313

Query: 237 ----SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG-------------V 279
               +L+   LK GI P  V + ++I    QVG  + A +L R+M              V
Sbjct: 314 GNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLV 373

Query: 280 MSG------------------DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           + G                  DS LP+  T+N +I+  C+  ++  A  +   M KAG+ 
Sbjct: 374 LKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY +L+ GY + G  +EA++L  EM   G  PN V Y + +    A+ D + A  +
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYAL 493

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M    +  + +TY++L  G+C    V +   +    + E  +    +YN +IN   K
Sbjct: 494 LDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVK 553

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  + +A  +   M  +GL P+IITY + IDGYC+ G  + A+++  ++++   +P++V 
Sbjct: 554 AGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVA 613

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL------------------------------ 531
           YN++ING C++ ++  A  LL    + GL                               
Sbjct: 614 YNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMI 673

Query: 532 ------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
                 D  TY TLI+G+  +G +A A  ++SEM   G   +   +  L + LC+ G   
Sbjct: 674 KGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDID 733

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A++L++ M    + P+   Y  L+  + ++C  +E   LHD+M+  G+ PD+ TY+ ++
Sbjct: 734 GAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793

Query: 646 S 646
           S
Sbjct: 794 S 794



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 236/473 (49%), Gaps = 13/473 (2%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-- 202
           T  ++  L+R C Q+G T+ AY++ +++  +G   S    +  L  L  LN+  R WK  
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGL--LND--RRWKDA 386

Query: 203 --LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             L++EM   G + +V T+N +I+  C+  KL EAL+L+ RM K+G+ P++  +N ++  
Sbjct: 387 VCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG 445

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G ++ A+KL+ +M +   +   PN VT+  ++ G+      + A  +   M + G+
Sbjct: 446 YCKKGCMDEAVKLYSEMPM---EGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
            CN  TY  LI+G        E   +    +  G +P  + YNS I+     G +  A  
Sbjct: 503 SCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFT 562

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V   M +K + P+  TY+    G CR GC   A K+ N V    +  D  +YN LIN  C
Sbjct: 563 VYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFC 622

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +  N++ A QLL  ++  GL P+ + Y +LI GY     ++   + YE+M K     +  
Sbjct: 623 QEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTS 682

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y ++I+G  KD ++  A  L       G + DA T+  L +G   +G I  A  +  EM
Sbjct: 683 TYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           R + +  N   YN+LIN   +    Q+A  L   M+  GI PD  TY  LV++
Sbjct: 743 RRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSK 795



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 224/446 (50%), Gaps = 28/446 (6%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE 163
           L+N RR+ DA+ L   +  +          GL D +         ++ L+    Q     
Sbjct: 377 LLNDRRWKDAVCLFEEMADS----------GLPDVF--------TYNNLIHWHCQAHKLR 418

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A ++  ++K  G   SI+ +N+ L    K   +    KLY EM   G+  NV T+  ++
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG---DLEFALKLFRKMGVM 280
                +   + A +L   M ++G+  N   +N++IN  C V    +++  LK F   G  
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGF- 537

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
                +P  +T+N IINGF K G +  A  +   M + G+  N+ TY + IDGY R G S
Sbjct: 538 -----IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS 592

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           + AL++ +++ +RGL P+ V YN+ I+    EG++  AL +L  ++   + P+   Y+ L
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G      +K+  K +  +++  +V D  +Y  LI+   K  N+A A +L S M+ +G 
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           IPD  T+  L  G C+ G+I+GA ++ E M++++ +PN+ IYN +ING  +D  L  A  
Sbjct: 713 IPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772

Query: 521 LLQASQRIGLL-DAITYNTLINGYFI 545
           L      +G+  D  TY+ L++  F+
Sbjct: 773 LHDEMLNMGIQPDDTTYDILVSKKFL 798



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 235/519 (45%), Gaps = 40/519 (7%)

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A D    +  +G    I +  + L    + +       L+ EM   GY  +   F+ ++
Sbjct: 140 AATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALM 199

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
            A  KE   E+A+ L+  M  + I P+   + + I   C++GD   AL++ R+M  +  D
Sbjct: 200 SACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFD 259

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           +      T+  +++   K GR+E A  +   M  AG   +V    TL+ GY        A
Sbjct: 260 TC---DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           L L  E +K G++P  V+Y   I      G  + A  +   M  + + P  F  S++ KG
Sbjct: 317 LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKG 376

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           L  +   K A  L  ++ +  +  D ++YN LI++ C+++ L  A  L   M   G+ P 
Sbjct: 377 LLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I TY +L+ GYCK G ++ AV++Y  M     KPN+V Y +++ G       D A +LL 
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495

Query: 524 ASQRIG----------LLDAI--------------------------TYNTLINGYFING 547
             ++ G          L++ I                          TYN++ING+   G
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
            +  AF ++ +MR  G+  N + Y   I+  C+ GC   A +++  +   G+ PD V Y 
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            L+  F +  +    ++L   ++  G++P+   YN++I+
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLIT 654



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 124/280 (44%), Gaps = 40/280 (14%)

Query: 132 LEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           ++G+L S+  E    T   +++++    + G    A+ V Q+++ KG   +I  + +F+ 
Sbjct: 525 VDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFID 584

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
              +        K+  ++   G   ++  +N +I   C+E  +  AL L   +LK G+ P
Sbjct: 585 GYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAP 644

Query: 250 NVVCFN-----------------------------------MIINEACQVGDLEFALKLF 274
           N V +N                                    +I+   + G++ FAL+L+
Sbjct: 645 NTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELY 704

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M        +P++ T   + +G C+ G ++ A+++   M +  +  NV  Y  LI+GY
Sbjct: 705 SEM---MAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
            R    +EA RL DEM+  G+ P++  Y+  +   F E D
Sbjct: 762 LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKFLEAD 801



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 1/247 (0%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A   +  ++   +V D  S   L+    + ++   A  L   M  RG   D   +  L+ 
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
              K G  E AV++++ M   E  P+  +Y   I  LCK      A  +L+  + +G   
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260

Query: 533 A-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
              TY T+++     G++ EA  +  EMR+ G  ++ +    L+   C       A  L 
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           K  +  GI+P  V Y  L+    +    ++  EL   M   G+ P     + ++  LL +
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 652 KSAEDQV 658
           +  +D V
Sbjct: 381 RRWKDAV 387


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 239/485 (49%), Gaps = 12/485 (2%)

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +G  D+Y +C         +VR   +    E    +I     KG   +I  +N  +    
Sbjct: 200 DGCWDNYSVC--------IMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYW 251

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  ++ R   L+KE+   G++    T+ ++I  LCK+C  +    L   M + G+  NV 
Sbjct: 252 KRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQ 311

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N I++   + G     +++ + +  ++ +   P+  T+N +I+G C+ G+V  AEE+ 
Sbjct: 312 VYNSIVDAQIKHG---CKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELL 368

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
              IK G+  N  +Y  LI  Y + G    A  L   M ++G   + V Y + +H L A 
Sbjct: 369 EHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAA 428

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G+V+ AL V   M+++ + PD   Y++L  GLC+ G +  A  L  ++L +++  DA+  
Sbjct: 429 GEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVS 488

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             L++   +   L  AK+L    I +G+ P ++ Y  +I GYCK G +  A+   + MK 
Sbjct: 489 ATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKD 548

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            +  P+   Y++II+G  K   L  A  L  Q  ++    + +TY +LING+   G  + 
Sbjct: 549 GDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSR 608

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A   F EMR+ G+  N V Y ILI   CK G   +A    ++M+L+  IP+ VT+  L+ 
Sbjct: 609 AEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLIN 668

Query: 612 RFSKN 616
             + N
Sbjct: 669 GLTNN 673



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 169/615 (27%), Positives = 278/615 (45%), Gaps = 57/615 (9%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLE--SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL 129
           + P L L+ + W  + + F+  L+  S  +++ LL   R F +   L+  +   +     
Sbjct: 75  RDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTR 134

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E L  ++ +Y        V   LV    ++     AYD+   L        + A N  L+
Sbjct: 135 EALSFVVGAY--------VDSGLVNRALELYHI--AYDIHNYLP------DVIACNALLN 178

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L++  ++    K+Y+EMV      +  +  +++  LCKE K+EE   L       G  P
Sbjct: 179 ALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIP 238

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N+V +N +++   + GD+E A  LF+++  M G   LP + T+  +ING CK    +  +
Sbjct: 239 NIVFYNTLVDGYWKRGDVERANGLFKELK-MKG--FLPTTETYGIMINGLCKKCNFKAVD 295

Query: 310 EIRYAMIKAGIDCNVR-----------------------------------TYATLIDGY 334
            +   M + G+D NV+                                   TY TLI G 
Sbjct: 296 GLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGS 355

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            R G   EA  L +  +KRGL PN + Y   IH    +G    A  +   M +K    D 
Sbjct: 356 CRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDL 415

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
             Y  L  GL   G V  A  + ++++E  ++ DA  YN+L+N LCK   L+AAK LL  
Sbjct: 416 VAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVE 475

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+ + L  D     TL+DG+ + G ++ A +++E        P +V YN++I G CK   
Sbjct: 476 MLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGM 535

Query: 515 LDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           ++ A + +Q  +      D  TY+T+I+GY     +  A  +F +M       N V Y  
Sbjct: 536 MNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTS 595

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LIN  C+ G   +A +  + M   G+ P+ VTYT L+  F K     +     + M+L+ 
Sbjct: 596 LINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNR 655

Query: 634 VSPDNQTYNAIISPL 648
             P++ T+N +I+ L
Sbjct: 656 CIPNDVTFNYLINGL 670



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 186/428 (43%), Gaps = 22/428 (5%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    + G    A+D+   +  KGH + + A+   +  LV   E+     +  +MV
Sbjct: 383 YTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMV 442

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G + + N +N+++  LCK+ +L  A  L   ML   +  +      +++   + G L+
Sbjct: 443 ERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLD 502

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A KLF ++ +  G  + P  V +N +I G+CK G +  A      M       +  TY+
Sbjct: 503 EAKKLF-ELTIAKG--MDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYS 559

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDGY +      AL+L  +MVK+   PN V Y S I+     GD   A     +M   
Sbjct: 560 TIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSS 619

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+  TY+IL    C+ G + +A      +L    + +  ++N LIN L  +NNLA A
Sbjct: 620 GLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL--TNNLATA 677

Query: 449 ----------------KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
                                +MI  G    +  Y +++   C    +  A+Q+ + M  
Sbjct: 678 VSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTG 737

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAE 551
               P+ V + +++ GLC +      K+ +        L  A+ Y+  +N +   G  +E
Sbjct: 738 KGIFPDPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSE 797

Query: 552 AFAMFSEM 559
           A  +F  +
Sbjct: 798 ASKVFHTL 805


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 259/519 (49%), Gaps = 7/519 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS--IHAWNNFLSHLVKLNEIGR 199
           C      ++ ++++      ++ A D++Q++  +G   S  + ++N  +    K  E+ +
Sbjct: 191 CVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSK 250

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L+ EMV  G V +V T+N ++ ALCK   +++A  +  +M+  G+ P+ V +N II+
Sbjct: 251 ACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIH 310

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
                G  + + K+FRK   M+   ++P++VT +  ++  CK GR + AEEI   M   G
Sbjct: 311 GYSCSGHWKESAKMFRK---MTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKG 367

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              ++ +Y+ L+ GYA  G   +   L   M  +G++ N    N  I      G ++ A+
Sbjct: 368 HMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAM 427

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V ++M  + + P+  TYS L    CR G +  A +  +Q++   +  +   Y+ LI+  
Sbjct: 428 LVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGF 487

Query: 440 CKSNNLAAAKQLLSSMIVRGL-IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           C   +L  AK+ +S M+ +GL  P+I+ + ++I   C  G +  A  V+  +  +  +P 
Sbjct: 488 CMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPT 547

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           +V +NS+I+G C    ++ A  +L A   +G+  D +T NTL++GY  +GKI +   +F 
Sbjct: 548 IVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFR 607

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM +  +    V YNI+++ L + G    A+++   MI  G   D  TY  L+    +N 
Sbjct: 608 EMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 667

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +E I L   +       D    N +I+ L   +  E+
Sbjct: 668 LTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREE 706



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 239/462 (51%), Gaps = 9/462 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--IWPNVVCFNMIINE 260
           L   M     V +  ++N VI +LC + + +EAL +  RM K G    P+VV FN +I+ 
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G++  A  LF +M V  G  V+P+  T+N I++  CK   ++ AE +   M+  G+
Sbjct: 242 FFKQGEVSKACNLFNEM-VQKG--VVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + +  TY  +I GY+  G  +E+ ++  +M  +GL+P+ V ++S +  L   G  + A  
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE 358

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +   M  K   PD  +YSIL  G    G       L + + ++ +V + +  NILI+   
Sbjct: 359 IFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHA 418

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A  + + M  +G+ P+++TY TLI  +C+ G +  A++ +  M  +  +PN  
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTA 478

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL--LDAITYNTLINGYFINGKIAEAFAMFSE 558
           +Y+S+I+G C    L  AK  +      GL   + + ++++I+   I G++ +A  +F+ 
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           + ++G     V +N LI+  C  G  ++A  ++  M+  GI PD VT  TLV+ + K+  
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
            ++ + L  +M+   V P   TYN ++  LL  G  SA  ++
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 225/480 (46%), Gaps = 5/480 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F + + +  + G ++ A ++ Q +  KGH   I +++  L              L+  M
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G V N +  N++I A  K   ++EA+ ++  M   G+ PNVV ++ +I+  C++G L
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID-CNVRT 326
             A++ F +M  +    + PN+  ++ +I+GFC  G +  A+E    M+  G+   N+  
Sbjct: 459 ADAMEKFSQMISI---GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVF 515

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           ++++I      G   +A  + + ++  G  P  V +NS I      G +E A  VL  M+
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 575

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I PD  T + L  G C++G +     L  ++L + +     +YNI+++ L ++   +
Sbjct: 576 SVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTS 635

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           AAK++   MI  G   DI TY  L+ G C+    + A+ ++  +  ++ K ++ I N++I
Sbjct: 636 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMI 695

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           N L K    + A  L  A    GL+  + TY  +I      G + EA  MFS M   G A
Sbjct: 696 NALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCA 755

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +    N +I  L + G   +A   M  +    I  +  T + L++ FS      E I+ 
Sbjct: 756 PSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 815



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 116/230 (50%), Gaps = 4/230 (1%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY-EN 489
           +Y IL++  C++         ++ ++  GL    I   T +   C     + AV V    
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHR 185

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG---LLDAITYNTLINGYFIN 546
           M ++   P+ + YN++I  LC D+    A  ++Q   + G     D +++NT+I+G+F  
Sbjct: 186 MSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 245

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G++++A  +F+EM   G+  +   YN +++ LCK     +A  +++ M+  G+ PD VTY
Sbjct: 246 GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTY 305

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             ++  +S +   +E  ++   M   G+ PD  T+++ +S L     ++D
Sbjct: 306 NAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKD 355


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 260/529 (49%), Gaps = 9/529 (1%)

Query: 129 LEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +E  + L D       TP    + +L+    +       Y+++ ++K +   +S + +  
Sbjct: 366 MEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGT 425

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +  +    ++   + + KEM + G   NV  +  +I    ++ +  +A+ +   M + G
Sbjct: 426 AVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQG 485

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I P+  C+N +I    +   ++ A     +M V +G    P++ T+   I+G+ + G   
Sbjct: 486 IAPDTFCYNSLIIGLSKAKKMDEARSFLLEM-VENG--FKPDAFTYGAFISGYIEAGEFA 542

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A++    M++ G+  N      LI+ Y + G   EA      MV++G++ +   Y   +
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLM 602

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G V  A  +  +M  K I PD F+Y  L  G  + G +++A  + +++++  + 
Sbjct: 603 NGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLT 662

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +   YN+L+   C+S  +  AK+LL  M  +G  P+ +TY T+IDGYCK G++  A Q+
Sbjct: 663 SNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQL 722

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFIN 546
           ++ MK     P+  +Y ++++G C+   ++ A ++ + +++     +  +N LIN  F  
Sbjct: 723 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKF 782

Query: 547 GKIAEAFAMFSEMRNVGI----AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           GK      M + + +         N V YNI+I++LCK G  + A+EL   M    ++P 
Sbjct: 783 GKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPT 842

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            +TYT+L+  + K     E+  + D+++ +G+ PDN  Y+ II+  L E
Sbjct: 843 VITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 265/546 (48%), Gaps = 47/546 (8%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           +P  +   V+     G  +GAY++++++   G   ++  +   +   ++ +  G   ++ 
Sbjct: 419 SPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVL 478

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           KEM   G   +   +N +I  L K  K++EA S    M+++G  P+   +   I+   + 
Sbjct: 479 KEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEA 538

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+   A K  ++M +  G  V+PN V    +IN +CK G+V  A     +M++ GI  + 
Sbjct: 539 GEFASADKYVKEM-LECG--VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDA 595

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           +TY  L++G  + G   +A  +  EM  +G+ P+   Y + I      G+++ A  +  +
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+   +  +   Y++L  G CR+G +++A +L +++  +    +A +Y  +I+  CKS +
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK------------ 492
           LA A QL   M ++GL+PD   Y TL+DG C+  ++E A+ ++E  +K            
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNAL 775

Query: 493 ------------------------VEK--KPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
                                    +K  KPN V YN +I+ LCK+ +L+AAK L    Q
Sbjct: 776 INWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQ 835

Query: 527 RIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +  L+   ITY +L+NGY   G+ +E F++F E+   GI  + + Y+++IN   K G   
Sbjct: 836 KANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTT 895

Query: 586 QARELMKVMILHGIIPD-----YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           +A  L+  M     + D       T   L++ F+K    E   ++ ++MV     PD+ T
Sbjct: 896 KALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSST 955

Query: 641 YNAIIS 646
              +I+
Sbjct: 956 VIELIN 961



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 235/520 (45%), Gaps = 54/520 (10%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE---------- 229
           S+   N+ L  L+K N +  FW +YK MV    V +V ++ ++I A C++          
Sbjct: 188 SLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVL 247

Query: 230 -----------CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM- 277
                        ++EAL L   M   G+ P+   +N++I+  C+   LE A  L  +M 
Sbjct: 248 LKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMN 307

Query: 278 ----------------GVMSG-DSVLPNSVTHNCIINGF--------------CKLGRVE 306
                           G++ G ++   N + H  + +GF               K G +E
Sbjct: 308 SVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAME 367

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A+ +   MI  G+    R YA+LI+G+ R  +  +   L  E+ KR ++ +   Y + +
Sbjct: 368 KAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAV 427

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             + + GD++GA  ++ +M      P+   Y+ L K   +      A ++  ++ E+ + 
Sbjct: 428 KGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIA 487

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D + YN LI  L K+  +  A+  L  M+  G  PD  TYG  I GY + G    A + 
Sbjct: 488 PDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKY 547

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFI 545
            + M +    PN V+   +IN  CK   +  A S  ++    G+L DA TY  L+NG   
Sbjct: 548 VKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVK 607

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           NGK+ +A  +F EMR  GIA +   Y  LI+   K G  Q+A  +   M+  G+  + + 
Sbjct: 608 NGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVII 667

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           Y  L+  F ++   E+  EL D+M   G  P+  TY  II
Sbjct: 668 YNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTII 707



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 172/372 (46%), Gaps = 13/372 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+    + G    A ++  +++ KG +  + ++   +    KL  + +   ++ EM
Sbjct: 597 TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM 656

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   NV  +N+++   C+  ++E+A  L   M   G  PN V +  II+  C+ GDL
Sbjct: 657 VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDL 716

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +LF +M +     ++P+S  +  +++G C+L  VE A  I +   + G   +   +
Sbjct: 717 AEAFQLFDEMKL---KGLVPDSFVYTTLVDGCCRLNDVERAITI-FETNEKGCASSSAPF 772

Query: 328 ATLIDGYARGGSSEEAL----RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             LI+   + G +E       RL D    +   PN+V YN  I +L  EG++E A  +  
Sbjct: 773 NALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 832

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M   ++ P   TY+ L  G  + G   + F + ++V+   +  D   Y+++IN   K  
Sbjct: 833 HMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEG 892

Query: 444 NLAAAKQLLSSMIVRGLIPD-----IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
               A  LL  M  +  + D     I T   L+ G+ K G +E A +V ENM +++  P+
Sbjct: 893 MTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPD 952

Query: 499 LVIYNSIINGLC 510
                 +IN  C
Sbjct: 953 SSTVIELINESC 964



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 132/545 (24%), Positives = 217/545 (39%), Gaps = 115/545 (21%)

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP---------------------NVV 252
           + +++F+ +   LC    +E+A S+  RM++   WP                      V+
Sbjct: 95  QKLDSFSFLALDLCNFGSIEKAHSVVIRMIERK-WPVAEVWSSIVRCLREFVGKSDDRVL 153

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            F ++I+   + G L+ A+ +F     +  D ++P+    N +++   K  R++   ++ 
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKDLDLD-LVPSLARCNHLLDALLKRNRLDLFWDVY 212

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSE---------------------EALRLCDEMV 351
             M++  +  +V++Y  LI  + R G+ +                     EAL L   M 
Sbjct: 213 KGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMS 272

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +GL+P+   YN  I  L  +  +E A  +L +M    +  D+  YSIL  GL +     
Sbjct: 273 CKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNAD 332

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP--------- 462
            A  L ++++      D   Y+  I  + K   +  AK L   MI  G+ P         
Sbjct: 333 AANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLI 392

Query: 463 ----------------------DII----TYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
                                 +I+    TYGT + G C  G+++GA  + + M     +
Sbjct: 393 EGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCR 452

Query: 497 PNLVI-----------------------------------YNSIINGLCKDASLDAAKSL 521
           PN+VI                                   YNS+I GL K   +D A+S 
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSF 512

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L      G   DA TY   I+GY   G+ A A     EM   G+  NKV    LIN  CK
Sbjct: 513 LLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCK 572

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A    + M+  GI+ D  TYT L+    KN    +  E+  +M   G++PD  +
Sbjct: 573 KGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS 632

Query: 641 YNAII 645
           Y  +I
Sbjct: 633 YGTLI 637



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEM--VKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           D  V  +  LIDGY   G  +EA+ +      +   L+P+    N  +  L     ++  
Sbjct: 149 DDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLF 208

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK---------------------QAFKLH 417
             V   M+++++  D  +Y +L    CR+G V+                     +A +L 
Sbjct: 209 WDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELK 268

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             +  + +V    SYN+LI+ LCK   L  AK LL  M   GL  D + Y  LIDG  KG
Sbjct: 269 KSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKG 328

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
            N + A  +   M       + ++Y+  I  + K+ +++ AK+L       G+   A  Y
Sbjct: 329 RNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAY 388

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            +LI G+F    + + + +  E++   I ++   Y   +  +C  G    A  ++K M  
Sbjct: 389 ASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGA 448

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G  P+ V YTTL+  F +     + + +  +M   G++PD   YN++I  L   K  ++
Sbjct: 449 SGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDE 508



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 151/342 (44%), Gaps = 42/342 (12%)

Query: 145 TPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
            P VF    L+   +++G  + A  +  ++   G + ++  +N  L    +  EI +  +
Sbjct: 627 APDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKE 686

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EM   G+  N  T+  +I   CK   L EA  L+  M   G+ P+   +  +++  C
Sbjct: 687 LLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCC 746

Query: 263 QVGDLEFALKLFR--KMGVMSGDSVL---------------------------------P 287
           ++ D+E A+ +F   + G  S  +                                   P
Sbjct: 747 RLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKP 806

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N VT+N +I+  CK G +E A+E+ + M KA +   V TY +L++GY + G   E   + 
Sbjct: 807 NDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVF 866

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI-----LTK 402
           DE++  G+ P+N++Y+  I+    EG    AL +L  M  K+   D    SI     L  
Sbjct: 867 DEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLS 926

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           G  + G ++ A K+   ++    + D+ +   LIN  C S+N
Sbjct: 927 GFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSN 968


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 253/500 (50%), Gaps = 8/500 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C +    +G Y+++ ++K +   +S + +   +  +    ++   + + KEM++ G   N
Sbjct: 393 CREKNVRQG-YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V  +  +I    +  +  +A+ +   M + GI P++ C+N +I    +   ++ A     
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M V +G  + PN+ T+   I+G+ +      A++    M + G+  N      LI+ Y 
Sbjct: 512 EM-VENG--LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G   EA      MV +G++ +   Y   ++ LF    V+ A  +  +M  K I PD F
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +Y +L  G  + G +++A  + ++++EE +  +   YN+L+   C+S  +  AK+LL  M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
            V+GL P+ +TY T+IDGYCK G++  A ++++ MK     P+  +Y ++++G C+   +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 516 DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI----AVNKVGY 571
           + A ++   +++        +N LIN  F  GK      + + + +         N V Y
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           NI+I++LCK G  + A+EL   M    ++P  +TYT+L+  + K     E+  + D+ + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 632 SGVSPDNQTYNAIISPLLGE 651
           +G+ PD+  Y+ II+  L E
Sbjct: 869 AGIEPDHIMYSVIINAFLKE 888



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 266/549 (48%), Gaps = 53/549 (9%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           +P  +  +V+     G  +GAY++++++   G   ++  +   +   ++ +  G   ++ 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN---EA 261
           KEM   G   ++  +N +I  L K  +++EA S    M+++G+ PN   +   I+   EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            +    +  +K  R+ G      VLPN V    +IN +CK G+V  A     +M+  GI 
Sbjct: 536 SEFASADKYVKEMRECG------VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            + +TY  L++G  +    ++A  +  EM  +G+ P+   Y   I+     G+++ A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+++ + P+   Y++L  G CR+G +++A +L +++  + +  +A +Y  +I+  CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK--------- 492
           S +LA A +L   M ++GL+PD   Y TL+DG C+  ++E A+ ++   KK         
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769

Query: 493 ------VEK-----------------------KPNLVIYNSIINGLCKDASLDAAKSLLQ 523
                 V K                       KPN V YN +I+ LCK+ +L+AAK L  
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829

Query: 524 ASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             Q   L+   ITY +L+NGY   G+ AE F +F E    GI  + + Y+++IN   K G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889

Query: 583 CYQQARELMKVMILHGIIPD-----YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
              +A  L+  M     + D       T   L++ F+K    E   ++ ++MV     PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949

Query: 638 NQTYNAIIS 646
           + T   +I+
Sbjct: 950 SATVIELIN 958



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 171/644 (26%), Positives = 293/644 (45%), Gaps = 31/644 (4%)

Query: 11  KSNSPLSRAFHVG-KQFANPSTEDIVFRAICVNLRQRKWK---ILEQMAPSLTNSLVNRV 66
           ++N  L R+F V  ++ ++ S E      I   L+Q  W+   +   ++  +   +V  V
Sbjct: 15  RANFLLFRSFSVNVEKLSDASAE------IAGILKQENWRDTLVSSNLSIEINPEVVLSV 68

Query: 67  VSEFR-KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANS 125
           +   R   P   L F+ WV         L+S   +   L N+  F+ AL ++  ++  N 
Sbjct: 69  LRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW 128

Query: 126 VSPLEFLEGLLDSYE-ICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                +   +  S E + K+   V F  L          E A  V            +  
Sbjct: 129 PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSR 188

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
               L  L++ N +  FW +YK MV    V +V T++++I A C+   ++    + ++  
Sbjct: 189 CKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K      +              +++ ALKL   M +  G  ++P   T++ +I+G CK+ 
Sbjct: 249 KEFRTATL--------------NVDGALKLKESM-ICKG--LVPLKYTYDVLIDGLCKIK 291

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R+E A+ +   M   G+  +  TY+ LIDG  +G +++ A  L  EMV  G+     +Y+
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             I  +  EG +E A  +   MI   + P    Y+ L +G CR   V+Q ++L  ++ + 
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++V   Y+Y  ++  +C S +L  A  ++  MI  G  P+++ Y TLI  + +      A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           ++V + MK+    P++  YNS+I GL K   +D A+S L      GL  +A TY   I+G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y    + A A     EMR  G+  NKV    LIN  CK G   +A    + M+  GI+ D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             TYT L+    KN   ++  E+  +M   G++PD  +Y  +I+
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 160/362 (44%), Gaps = 42/362 (11%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHW----LFAEGDVEGA 378
           +  L DGY      EEA+ +    +   L+P      V+ ++ + W    LF +      
Sbjct: 154 FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD------ 207

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK---------------------QAFKLH 417
             V   M+++++  D  TY +L    CR G V+                      A KL 
Sbjct: 208 --VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             ++ + +V   Y+Y++LI+ LCK   L  AK LL  M   G+  D  TY  LIDG  KG
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 478 GNIEGAVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
            N + A  +   M    +  KP +  Y+  I  + K+  ++ AK+L       GL+  A 
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y +LI GY     + + + +  EM+   I ++   Y  ++  +C  G    A  ++K M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           I  G  P+ V YTTL+  F +N    + + +  +M   G++PD   YN++I  L   K  
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503

Query: 655 ED 656
           ++
Sbjct: 504 DE 505



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 42/342 (12%)

Query: 145 TPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
            P VF    L+   +++G  + A  +  ++  +G + ++  +N  L    +  EI +  +
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EM   G   N  T+  +I   CK   L EA  L+  M   G+ P+   +  +++  C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 263 QVGDLEFALKLF--RKMGVMSGDSVL---------------------------------P 287
           ++ D+E A+ +F   K G  S  +                                   P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N VT+N +I+  CK G +E A+E+ + M  A +   V TY +L++GY + G   E   + 
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI-----LTK 402
           DE +  G+ P++++Y+  I+    EG    AL ++  M  K+   D    SI     L  
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           G  + G ++ A K+   ++    + D+ +   LIN  C S+N
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 167/620 (26%), Positives = 288/620 (46%), Gaps = 22/620 (3%)

Query: 45  QRKWKIL---EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           +R W+I    E ++  L    V  ++      PKL L F+ ++G +  F HS  S C ++
Sbjct: 52  KRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILI 111

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK-ATPAVFDALVRACTQIG 160
           H LV    F  A  L+   +   ++ P +    L   YE CK ++ + FD L++   +  
Sbjct: 112 HALVKANLFWPASSLL-QTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVR-- 168

Query: 161 ATEGAYDVIQKLKVKGHSVS----IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            +    D +   K+    VS    +   +  L  LVK    G   +L+ +MVS G   +V
Sbjct: 169 -SRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
             +  VI +LC+   L  A  +   M  +G   N+V +N++I+  C+        K++  
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK------KQKVWEA 281

Query: 277 MGV---MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           +G+   ++G  + P+ VT+  ++ G CK+   E   E+   M+      +    ++L++G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             + G  EEAL L   +V  G+ PN  VYN+ I  L        A  +   M    + P+
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TYSIL    CR G +  A     ++++  +    Y YN LIN  CK  +++AA+  ++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            MI + L P ++TY +L+ GYC  G I  A+++Y  M      P++  + ++++GL +  
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521

Query: 514 SL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            + DA K   + ++     + +TYN +I GY   G +++AF    EM   GI  +   Y 
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+ LC  G   +A+  +  +       + + YT L+  F +    EE + +  +MV  
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641

Query: 633 GVSPDNQTYNAIISPLLGEK 652
           GV  D   Y  +I   L  K
Sbjct: 642 GVDLDLVCYGVLIDGSLKHK 661



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/586 (25%), Positives = 270/586 (46%), Gaps = 56/586 (9%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++H LV +R F  A+ L  +++S   + P        D Y        ++  ++R+  +
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVG-IRP--------DVY--------IYTGVIRSLCE 239

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +     A ++I  ++  G  V+I  +N  +  L K  ++     + K++       +V T
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299

Query: 219 FNLVIYALCK-----------------------------------ECKLEEALSLYYRML 243
           +  ++Y LCK                                     K+EEAL+L  R++
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G+ PN+  +N +I+  C+      A  LF +MG +    + PN VT++ +I+ FC+ G
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG---LRPNDVTYSILIDMFCRRG 416

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +++ A      M+  G+  +V  Y +LI+G+ + G    A     EM+ + L P  V Y 
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S +    ++G +  AL +  +M  K I P  +T++ L  GL R G ++ A KL N++ E 
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++  +  +YN++I   C+  +++ A + L  M  +G++PD  +Y  LI G C  G    A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
               + + K   + N + Y  +++G C++  L+ A S+ Q   + G+ LD + Y  LI+G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +      F +  EM + G+  + V Y  +I+   K G +++A  +  +MI  G +P+
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            VTYT ++    K     E   L   M      P+  TY   +  L
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 156/587 (26%), Positives = 265/587 (45%), Gaps = 28/587 (4%)

Query: 89  RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL-EGLLDSYEICKA--- 144
           RFS S  +  ++V  L    + ++AL L+  ++    VSP  F+   L+DS  +CK    
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG-VSPNLFVYNALIDS--LCKGRKF 383

Query: 145 -----------------TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
                                +  L+    + G  + A   + ++   G  +S++ +N+ 
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           ++   K  +I        EM++      V T+  ++   C + K+ +AL LY+ M   GI
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P++  F  +++   + G +  A+KLF +M   +   V PN VT+N +I G+C+ G +  
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN---VKPNRVTYNVMIEGYCEEGDMSK 560

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A E    M + GI  +  +Y  LI G    G + EA    D + K     N + Y   +H
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
               EG +E AL V  +M+ + +  D   Y +L  G  ++   K  F L  ++ +  +  
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D   Y  +I+   K+ +   A  +   MI  G +P+ +TY  +I+G CK G +  A  + 
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740

Query: 488 ENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFIN 546
             M+ V   PN V Y   ++ L K +  +  A  L  A  +  L +  TYN LI G+   
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G+I EA  + + M   G++ + + Y  +IN LC+    ++A EL   M   GI PD V Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
            TL+          +  EL ++M+  G+ P+N+T     S     KS
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 9/340 (2%)

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           VRT + L+ G  +      A+ L ++MV  G+ P+  +Y   I  L    D+  A  +++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251

Query: 384 DM----IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            M     D +I P    Y++L  GLC+   V +A  +   +  + +  D  +Y  L+  L
Sbjct: 252 HMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK        +++  M+     P      +L++G  K G IE A+ + + +      PNL
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
            +YN++I+ LCK      A+ L     +IGL  + +TY+ LI+ +   GK+  A +   E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G+ ++   YN LIN  CKFG    A   M  MI   + P  VTYT+L+  +     
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             + + L+ +M   G++P   T+  ++S L       D V
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 253/500 (50%), Gaps = 8/500 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C +    +G Y+++ ++K +   +S + +   +  +    ++   + + KEM++ G   N
Sbjct: 393 CREKNVRQG-YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V  +  +I    +  +  +A+ +   M + GI P++ C+N +I    +   ++ A     
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M V +G  + PN+ T+   I+G+ +      A++    M + G+  N      LI+ Y 
Sbjct: 512 EM-VENG--LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G   EA      MV +G++ +   Y   ++ LF    V+ A  +  +M  K I PD F
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +Y +L  G  + G +++A  + ++++EE +  +   YN+L+   C+S  +  AK+LL  M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
            V+GL P+ +TY T+IDGYCK G++  A ++++ MK     P+  +Y ++++G C+   +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 516 DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI----AVNKVGY 571
           + A ++   +++        +N LIN  F  GK      + + + +         N V Y
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           NI+I++LCK G  + A+EL   M    ++P  +TYT+L+  + K     E+  + D+ + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 632 SGVSPDNQTYNAIISPLLGE 651
           +G+ PD+  Y+ II+  L E
Sbjct: 869 AGIEPDHIMYSVIINAFLKE 888



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 266/549 (48%), Gaps = 53/549 (9%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           +P  +  +V+     G  +GAY++++++   G   ++  +   +   ++ +  G   ++ 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN---EA 261
           KEM   G   ++  +N +I  L K  +++EA S    M+++G+ PN   +   I+   EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            +    +  +K  R+ G      VLPN V    +IN +CK G+V  A     +M+  GI 
Sbjct: 536 SEFASADKYVKEMRECG------VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            + +TY  L++G  +    ++A  +  EM  +G+ P+   Y   I+     G+++ A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+++ + P+   Y++L  G CR+G +++A +L +++  + +  +A +Y  +I+  CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK--------- 492
           S +LA A +L   M ++GL+PD   Y TL+DG C+  ++E A+ ++   KK         
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769

Query: 493 ------VEK-----------------------KPNLVIYNSIINGLCKDASLDAAKSLLQ 523
                 V K                       KPN V YN +I+ LCK+ +L+AAK L  
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829

Query: 524 ASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             Q   L+   ITY +L+NGY   G+ AE F +F E    GI  + + Y+++IN   K G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889

Query: 583 CYQQARELMKVMILHGIIPD-----YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
              +A  L+  M     + D       T   L++ F+K    E   ++ ++MV     PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949

Query: 638 NQTYNAIIS 646
           + T   +I+
Sbjct: 950 SATVIELIN 958



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 172/644 (26%), Positives = 294/644 (45%), Gaps = 31/644 (4%)

Query: 11  KSNSPLSRAFHVG-KQFANPSTEDIVFRAICVNLRQRKWK---ILEQMAPSLTNSLVNRV 66
           ++N  L R+F V  ++ ++ S E      I   L+Q  W+   +   ++  +   +V  V
Sbjct: 15  RANFLLFRSFSVNVEKLSDASAE------IAGILKQENWRDTLVSSNLSIEINPEVVLSV 68

Query: 67  VSEFR-KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANS 125
           +   R   P   L F+ WV         L+S   +   L N+  F+ AL ++  ++  N 
Sbjct: 69  LRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW 128

Query: 126 VSPLEFLEGLLDSYE-ICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                +   +  S E + K+   V F  L       G  E A  V            +  
Sbjct: 129 PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSR 188

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
               L  L++ N +  FW +YK MV    V +V T++++I A C+   ++    + ++  
Sbjct: 189 CKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K      +              +++ ALKL   M +  G  ++P   T++ +I+G CK+ 
Sbjct: 249 KEFRTATL--------------NVDGALKLKESM-ICKG--LVPLKYTYDVLIDGLCKIK 291

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R+E A+ +   M   G+  +  TY+ LIDG  +G +++ A  L  EMV  G+     +Y+
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             I  +  EG +E A  +   MI   + P    Y+ L +G CR   V+Q ++L  ++ + 
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++V   Y+Y  ++  +C S +L  A  ++  MI  G  P+++ Y TLI  + +      A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           ++V + MK+    P++  YNS+I GL K   +D A+S L      GL  +A TY   I+G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y    + A A     EMR  G+  NKV    LIN  CK G   +A    + M+  GI+ D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             TYT L+    KN   ++  E+  +M   G++PD  +Y  +I+
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 161/362 (44%), Gaps = 42/362 (11%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHW----LFAEGDVEGA 378
           +  L DGY   G  EEA+ +    +   L+P      V+ ++ + W    LF +      
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD------ 207

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK---------------------QAFKLH 417
             V   M+++++  D  TY +L    CR G V+                      A KL 
Sbjct: 208 --VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             ++ + +V   Y+Y++LI+ LCK   L  AK LL  M   G+  D  TY  LIDG  KG
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 478 GNIEGAVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
            N + A  +   M    +  KP +  Y+  I  + K+  ++ AK+L       GL+  A 
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y +LI GY     + + + +  EM+   I ++   Y  ++  +C  G    A  ++K M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           I  G  P+ V YTTL+  F +N    + + +  +M   G++PD   YN++I  L   K  
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503

Query: 655 ED 656
           ++
Sbjct: 504 DE 505



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 42/342 (12%)

Query: 145 TPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
            P VF    L+   +++G  + A  +  ++  +G + ++  +N  L    +  EI +  +
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EM   G   N  T+  +I   CK   L EA  L+  M   G+ P+   +  +++  C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 263 QVGDLEFALKLF--RKMGVMSGDSVL---------------------------------P 287
           ++ D+E A+ +F   K G  S  +                                   P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N VT+N +I+  CK G +E A+E+ + M  A +   V TY +L++GY + G   E   + 
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI-----LTK 402
           DE +  G+ P++++Y+  I+    EG    AL ++  M  K+   D    SI     L  
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           G  + G ++ A K+   ++    + D+ +   LIN  C S+N
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965


>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 1 [Glycine max]
 gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 522

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 244/486 (50%), Gaps = 15/486 (3%)

Query: 14  SPLSRAFHVG---KQFANPSTEDIVFRAICVNLRQ---RKWKILEQMAPSLTNSLVNRVV 67
           +P S+ F +    +    P  +D+ F  ICV  R      W+ L  ++ SLT   +  ++
Sbjct: 19  TPTSKPFFLPIPHRTIPEPRGQDLDF--ICVAHRHVINSHWEKLLPLSTSLTPFRLKHLL 76

Query: 68  SEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS 127
              +     +L+  TWV ++N  SH+L++   ++H L   R+F      +   +S++   
Sbjct: 77  LALQNDHVSSLKLSTWVLKHNPSSHTLDTHSILLHTLSKHRQFKTTQKFLTQTLSSHP-- 134

Query: 128 PLEFLEGLLDSYEIC-KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           P    + LL SY +C  ++P VFD+L +          A  +   +K  G S ++ + N 
Sbjct: 135 PHTLFDALLFSYRLCNSSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNA 194

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           FLS L++L         Y+E+     V  NV T N++I A C   ++++   +  +M+  
Sbjct: 195 FLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDM 254

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G+ PNVV FN +I+  C  G    ALK+     +M  + V PN VT N +INGFCK  ++
Sbjct: 255 GLSPNVVSFNTLISGYCNKGLFGLALKV---KSLMVENGVQPNVVTFNTLINGFCKERKL 311

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +   M  A +D +V TY TL++GY + G SE  +R+ +EM++ GL  + + YN+ 
Sbjct: 312 HEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNAL 371

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L  +G  + A   + ++  +++ P+  T+S L  G C     ++AF ++  ++    
Sbjct: 372 ILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGC 431

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             +  ++ +LI+  CK+ +   A Q+L  M+ R + PD+ T   L DG C+ G  + A+ 
Sbjct: 432 SPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALA 491

Query: 486 VYENMK 491
           +   M+
Sbjct: 492 LCSEME 497



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 157/342 (45%), Gaps = 3/342 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+ +   L    K   A  +Y  M + G  P V   N  ++   ++   + AL  +R++ 
Sbjct: 157 FDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIR 216

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
             S   V PN  T N II  +C LG V+   ++   M+  G+  NV ++ TLI GY   G
Sbjct: 217 RRS--CVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKG 274

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
               AL++   MV+ G+ PN V +N+ I+    E  +  A  V ++M   ++ P   TY+
Sbjct: 275 LFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYN 334

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G  + G  +   +++ +++   +  D  +YN LI  LCK      A   +  +   
Sbjct: 335 TLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKE 394

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            L+P+  T+  LI G C   N E A  +Y +M +    PN   +  +I+  CK+   D A
Sbjct: 395 NLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGA 454

Query: 519 KSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
             +L+    R+   D  T + L +G    GK   A A+ SEM
Sbjct: 455 VQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEM 496



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 166/354 (46%), Gaps = 15/354 (4%)

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVY 362
           +   A  I   M + G    V++    +    R   ++ AL    E+ +R  + PN    
Sbjct: 169 KFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTL 228

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  I      G+V+    +L  M+D  + P+  +++ L  G C  G    A K+ + ++E
Sbjct: 229 NMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVE 288

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +  +  ++N LIN  CK   L  A ++ + M V  + P ++TY TL++GY + G+ E 
Sbjct: 289 NGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEM 348

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
            V+VYE M +   K +++ YN++I GLCKD     A   ++   +  L+ +A T++ LI 
Sbjct: 349 GVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALIT 408

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G  +      AF ++  M   G + N   + +LI+  CK   +  A ++++ M+   + P
Sbjct: 409 GQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSP 468

Query: 602 DYVTYTTL---VTRFSKN------CSPEEVIEL----HDDMVLSGVSPDNQTYN 642
           D  T + L   + R  KN      CS  EV  L     D   ++   P+N+T N
Sbjct: 469 DLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPDGFDKEKIAITHPENETSN 522



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 116/221 (52%), Gaps = 3/221 (1%)

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           + Y+ N++I   C    +     +L  M+  GL P+++++ TLI GYC  G    A++V 
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA--ITYNTLINGYFI 545
             M +   +PN+V +N++ING CK+  L  A  +     ++  +D   +TYNTL+NGY  
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFN-EMKVANVDPSVVTYNTLLNGYGQ 342

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G       ++ EM   G+  + + YN LI  LCK G  ++A   ++ +    ++P+  T
Sbjct: 343 VGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNAST 402

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           ++ L+T      + E    ++  MV SG SP+ QT+  +IS
Sbjct: 403 FSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLIS 443



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + P+ +T +++ +  C  G V++ F +  ++++  +  +  S+N LI+  C       A 
Sbjct: 221 VSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLAL 280

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           ++ S M+  G+ P+++T+ TLI+G+CK   +  A +V+  MK     P++V YN+++NG 
Sbjct: 281 KVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGY 340

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            +    +    + +   R GL  D +TYN LI G   +GK  +A     E+    +  N 
Sbjct: 341 GQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNA 400

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             ++ LI   C     ++A  + + M+  G  P+  T+  L++ F KN   +  +++  D
Sbjct: 401 STFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRD 460

Query: 629 MVLSGVSPDNQTYNAI 644
           M+   +SPD  T + +
Sbjct: 461 MLGRLMSPDLSTMSEL 476



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 23/284 (8%)

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHF--TYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
           H L A  +   +   LS  + KH    H   T+SIL   L ++   K   K   Q L  H
Sbjct: 74  HLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHSILLHTLSKHRQFKTTQKFLTQTLSSH 133

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
                +   +    LC S          SS +V         + +L            A 
Sbjct: 134 PPHTLFDALLFSYRLCNS----------SSPLV---------FDSLFKTLAHTNKFRHAT 174

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLING 542
            +Y  MK+    P +   N+ ++ L +    D A +  +  +R   +  +  T N +I  
Sbjct: 175 HIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRA 234

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y + G++ + F M  +M ++G++ N V +N LI+  C  G +  A ++  +M+ +G+ P+
Sbjct: 235 YCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPN 294

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            VT+ TL+  F K     E   + ++M ++ V P   TYN +++
Sbjct: 295 VVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLN 338



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 1/106 (0%)

Query: 552 AFAMFSEMRNVG-IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           A A + E+R    ++ N    N++I   C  G  Q+  ++++ M+  G+ P+ V++ TL+
Sbjct: 208 ALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLI 267

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + +         +++   MV +GV P+  T+N +I+    E+   +
Sbjct: 268 SGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHE 313


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 306/645 (47%), Gaps = 72/645 (11%)

Query: 54  MAPSLTNSLVNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           +   L +  V  ++ E   +S  L++ F+  + +   F HS  S+  + H+L   RRF +
Sbjct: 43  LVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKE 102

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
             +++  L+           EG    +E   +T  V+D L+   +++   + +  +++K+
Sbjct: 103 LQVILEQLLQE---------EGTFRKWE---STGLVWDMLLFLSSRLRMVDDSLYILKKM 150

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           K +  +VS  ++N+ L H     E  + W +YKE+      +N +T++ V+  LC++ KL
Sbjct: 151 KDQNLNVSTQSYNSVLYH---FRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKL 203

Query: 233 EEAL-----------------------------------SLYYRMLKSGIWPNVVCFNMI 257
           E+A+                                   S +  +LK G+ P+V   N++
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           IN  C VG +  AL+L      M+   V P+SVT+N +  GF  LG +  A E+   M+ 
Sbjct: 264 INGLCLVGSIAEALELASD---MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST-IHWLFAEGDVE 376
            G+  +V TY  L+ G  + G+ +  L L  +M+ RG   N+++  S  +  L   G ++
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL + + M    + PD   YSI+  GLC+ G    A  L++++ ++ ++ ++ ++  L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LC+   L  A+ LL S+I  G   DI+ Y  +IDGY K G IE A+++++ + +    
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
           P++  +NS+I G CK  ++  A+ +L   +  GL  + ++Y TL++ Y   G       +
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKF----GC--------YQQARELMKVMILHGIIPDY 603
             EM+  GI    V Y+++   LC+      C        +++ ++ ++ M   GI PD 
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +TY T++    +           + M    +   + TYN +I  L
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 158/658 (24%), Positives = 294/658 (44%), Gaps = 72/658 (10%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV----NWRRFDD 112
           S +  LV+ V++  R+  +L +     + E   F    ES+  +  +L+      R  DD
Sbjct: 84  SFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTF-RKWESTGLVWDMLLFLSSRLRMVDD 142

Query: 113 ALLLMGNLMSAN-SVSPLEF---------LEGLLDSY-EICKATPAVFDALVRACTQIGA 161
           +L ++  +   N +VS   +          + + D Y EI       +  +V    +   
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQK 202

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            E A   ++  + K    S+ ++N+ +S   KL  +      +  ++ CG V +V + N+
Sbjct: 203 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262

Query: 222 VIYALCKECKLEEALSLYYRMLK-----------------------SGIW---------- 248
           +I  LC    + EAL L   M K                       SG W          
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322

Query: 249 --PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG---DSVLPNSVTHNCIINGFCKLG 303
             P+V+ + +++   CQ+G+++  L L + M +  G   +S++P SV    +++G CK G
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSGLCKTG 377

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R++ A  +   M   G+  ++  Y+ +I G  + G  + AL L DEM  + ++PN+  + 
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + +  L  +G +  A  +L  +I      D   Y+I+  G  ++GC+++A +L   V+E 
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +     ++N LI   CK+ N+A A+++L  + + GL P +++Y TL+D Y   GN +  
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLC------------KDASLDAAKSLLQASQRIGL- 530
            ++   MK     P  V Y+ I  GLC            ++   +  K  L+  +  G+ 
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITYNT+I        ++ AF     M++  +  +   YNILI+ LC +G  ++A   
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  +    +      YTTL+        PE  ++L   ++  G +   + Y+A+I+ L
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 215/447 (48%), Gaps = 17/447 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L +    +G   GA++VI+ +  KG S  +  +   L    +L  I     L K+M
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353

Query: 208 VSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           +S G+ + ++   ++++  LCK  +++EALSL+ +M   G+ P++V ++++I+  C++G 
Sbjct: 354 LSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + AL L+ +M       +LPNS TH  ++ G C+ G +  A  +  ++I +G   ++  
Sbjct: 414 FDMALWLYDEM---CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  +IDGYA+ G  EEAL L   +++ G+ P+   +NS I+      ++  A  +L  + 
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK----- 441
              + P   +Y+ L       G  K   +L  ++  E +     +Y+++   LC+     
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 590

Query: 442 -------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
                         KQ L  M   G+ PD ITY T+I   C+  ++ GA    E MK   
Sbjct: 591 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 650

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
              +   YN +I+ LC    +  A S + + Q   + L    Y TLI  + + G    A 
Sbjct: 651 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCK 580
            +F ++ + G  V+   Y+ +IN LC+
Sbjct: 711 KLFHQLLHRGFNVSIRDYSAVINRLCR 737


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 255/519 (49%), Gaps = 26/519 (5%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           LV+   +IG  +    ++  L   G    +  +N  +    K  E+     L + M   G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYY-----RMLKSGIWPNV--------------- 251
            + ++ ++N +I   CK  + ++A SL +     R +K  ++ N+               
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 252 -VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
            + +  II+  C+   LE A  L+ +M +   +  LP+ VT++ I+NG CK GR+  A+E
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMII---NGFLPDVVTYSSIVNGLCKDGRLSEAQE 294

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M K G+D N   Y TLID   + GS+ EA     ++V RG+  + V+  + +  LF
Sbjct: 295 LLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLF 354

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
                + A  +   +   ++ P+  TY+ L  G C+ G +++   L  ++ E+H+  +  
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +Y+ +IN   K   L  A  ++  M+ + +IP+   Y  LIDGYCK G  E A  +Y  M
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKI 549
           K    K N V+++ ++N L +   +D A+ LL+  + R  LLD + Y +L++G+F  GK 
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKE 534

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
           + A  M  EM    I  + V YN+LIN L + G Y +A+ +   MI  G+ P+  TY  +
Sbjct: 535 SAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIM 593

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  + K    +  +EL ++M    + P + T N ++  L
Sbjct: 594 IKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGL 632



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 263/542 (48%), Gaps = 14/542 (2%)

Query: 111 DDALLLMGNLMSANSV-------SPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGA 161
           DD L L  +L++  ++         LE    L +   I    P V  + ++V    + G 
Sbjct: 229 DDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGR 288

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
              A ++++++K  G   +  A+   +  L K       +    ++V  G   ++     
Sbjct: 289 LSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTT 348

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           ++  L K  K +EA  ++  + K  + PN + +  +I+  C+VGD+E    L ++M    
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEM---E 405

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              + PN +T++ IING+ K G ++ A  +   M+   I  N   YA LIDGY + G  E
Sbjct: 406 EKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQE 465

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
            A  L +EM   GL  NNV+++  ++ L     ++ A  +L D+  + +  DH  Y+ L 
Sbjct: 466 IATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLM 525

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G  + G    A  +  ++ E+ +  D  +YN+LIN L +     A K + S MI  GL 
Sbjct: 526 DGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEA-KSVYSGMIEMGLA 584

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P+  TY  +I  YCK G ++ A++++  MK  +  P+ +  N+++ GL +   ++ A ++
Sbjct: 585 PNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNV 644

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L     +G+  + + +  L+N    +GK      M  ++ ++G+ +N+  YN LI   C+
Sbjct: 645 LNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCR 704

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
               ++A  ++K MI  G + D VTY  L+  + ++   ++ +  +  M+  GVSP+  T
Sbjct: 705 LRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVT 764

Query: 641 YN 642
           YN
Sbjct: 765 YN 766



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 255/534 (47%), Gaps = 40/534 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+ +  + G+   A+    +L V+G ++ +      +  L K ++      +++ + 
Sbjct: 311 YTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALS 370

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
               + N  T+  +I   CK   +E   SL   M +  I PNV+ ++ IIN   + G L+
Sbjct: 371 KLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILD 430

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ + +KM      +++PN+  +  +I+G+CK G+ E A ++   M  +G+  N   + 
Sbjct: 431 EAINVMKKM---LDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFD 487

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L++   RG   +EA  L  ++  RGL+ ++V Y S +   F  G    AL ++ +M +K
Sbjct: 488 VLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEK 547

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I  D  TY++L  GL  +G   +A  +++ ++E  +  +  +YNI+I   CK   L  A
Sbjct: 548 SIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNA 606

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L + M    ++P  IT  TL+ G  + G IE A+ V   M  +   PNLVI+  ++N 
Sbjct: 607 LELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNA 666

Query: 509 LCKDASLDA-----------------------------------AKSLLQASQRIGLL-D 532
             K    +A                                   A S+L+   R G + D
Sbjct: 667 SSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVAD 726

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +TYN LI GY  +  + +A A +++M N G++ N V YN+L+  L   G   +  EL  
Sbjct: 727 TVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFD 786

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M  +G+ PD  TY TL++ + K  + +E I L+ +MV  G  P   TYN +IS
Sbjct: 787 KMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLIS 840



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 223/464 (48%), Gaps = 21/464 (4%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           WN  + H      + +   +Y EM+      NV T N++++A CK   L  AL L   + 
Sbjct: 13  WNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL---LR 69

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
              +  + V +N +I   CQ G +  A   F  + +M       +++T N ++ GFC++G
Sbjct: 70  NVDVEVDTVTYNTVIWGFCQHGLVNQA---FGFLSIMVKKDTCFDTITCNILVKGFCRIG 126

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             ++ E I   ++  G   +V  + TLIDGY + G    AL L + M K GL+ + V YN
Sbjct: 127 LAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYN 186

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I+     G+ + A  +L ++ +     D   ++I  +       +K+   L       
Sbjct: 187 TLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDR-------IKKDDNL------- 232

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++  D  +Y  +I+  CK + L  A+ L   MI+ G +PD++TY ++++G CK G +  A
Sbjct: 233 NLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEA 292

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLING 542
            ++   MKK+   PN V Y ++I+ L K  S  +A     Q   R   LD +   TL++G
Sbjct: 293 QELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDG 352

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
            F + K  EA  MF  +  + +  N + Y  LI+  CK G  ++   L++ M    I P+
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            +TY++++  ++K    +E I +   M+   + P+   Y  +I 
Sbjct: 413 VITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILID 456



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 231/496 (46%), Gaps = 34/496 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + AL+    ++G  E    ++Q+++ K  + ++  +++ ++   K   +     + K+M
Sbjct: 380 TYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +    + N   + ++I   CK  K E A  LY  M  SG+  N V F++++N   +   +
Sbjct: 440 LDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRM 499

Query: 268 EFALKL----------------------FRKMGV----------MSGDSVLPNSVTHNCI 295
           + A +L                      F K G           M+  S+  + VT+N +
Sbjct: 500 DEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVL 559

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ING  + G+ E A+ +   MI+ G+  N  TY  +I  Y + G  + AL L +EM    +
Sbjct: 560 INGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKI 618

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           MP+++  N+ +  L   G++E A+ VL++M    I P+   + +L     ++G      +
Sbjct: 619 MPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQ 678

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +H Q+++  +  +  +YN LI   C+      A  +L  MI  G + D +TY  LI GYC
Sbjct: 679 MHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYC 738

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           +  +++ A+  Y  M      PN+V YN ++ GL     +     L    +  GL  DA 
Sbjct: 739 ESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDAS 798

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TY+TLI+GY   G   E+  ++ EM   G       YN+LI+   K G   QAREL+  M
Sbjct: 799 TYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEM 858

Query: 595 ILHGIIPDYVTYTTLV 610
            + G+ P   TY  L+
Sbjct: 859 QVRGVPPSSSTYDILI 874



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 253/535 (47%), Gaps = 44/535 (8%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            + D L ++ ++    E  +  + KL +  +S++  A    +    K+ ++ R   L +E
Sbjct: 348 TLVDGLFKS-SKPKEAEDMFRALSKLNLIPNSITYTA---LIDGYCKVGDMERVESLLQE 403

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       NV T++ +I    K+  L+EA+++  +ML   I PN   + ++I+  C+ G 
Sbjct: 404 MEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGK 463

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            E A  L+ +M  +SG  V  N+V  + ++N   +  R++ AEE+   +   G+  +   
Sbjct: 464 QEIATDLYNEMK-LSGLKV--NNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVN 520

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +L+DG+ + G    AL + +EM ++ +  + V YN  I+ L   G  E A  V S MI
Sbjct: 521 YTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMI 579

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +  + P+  TY+I+ K  C+ G +  A +L N++    ++  + + N L+  L ++  + 
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIE 639

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +L+ M V G+ P+++ +  L++   K G     +Q++E +  +  K N   YN++I
Sbjct: 640 KAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLI 699

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL-------------------------- 539
              C+      A S+L+   R G + D +TYN L                          
Sbjct: 700 VVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVS 759

Query: 540 ---------INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
                    + G    G +AE   +F +M+  G+  +   Y+ LI+   K G  +++  L
Sbjct: 760 PNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRL 819

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              M+  G +P   TY  L++ F+K    ++  EL ++M + GV P + TY+ +I
Sbjct: 820 YCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 31/340 (9%)

Query: 345 RLCD---EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           ++CD   EM+   + PN   +N  +H     G++  AL +L + +D  +  D  TY+ + 
Sbjct: 28  QVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLRN-VDVEV--DTVTYNTVI 84

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G C++G V QAF   + ++++    D  + NIL+   C+       ++++ +++  G  
Sbjct: 85  WGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTC 144

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
            D+I + TLIDGYCK G +  A+ + E M+K     ++V YN++ING CK    D AKSL
Sbjct: 145 KDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSL 204

Query: 522 L-QASQRIGLLDA---------------------ITYNTLINGYFINGKIAEAFAMFSEM 559
           L + S+  G+ D+                     ITY T+I+ Y     + EA A++ EM
Sbjct: 205 LHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEM 264

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G   + V Y+ ++N LCK G   +A+EL++ M   G+ P++V YTTL+    K  S 
Sbjct: 265 IINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSA 324

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAED 656
            E       +V+ G++ D      ++  L      K AED
Sbjct: 325 WEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 177/364 (48%), Gaps = 8/364 (2%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW--KLYKE 206
           + +L+    + G    A ++++++  K     +  +N  ++ L+   E G++    +Y  
Sbjct: 521 YTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLL---EHGKYEAKSVYSG 577

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   N  T+N++I A CK+ +L+ AL L+  M    I P+ +  N ++    + G+
Sbjct: 578 MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGE 637

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A+ +  +M VM    + PN V H  ++N   K G+     ++   ++  G+  N   
Sbjct: 638 IEKAMNVLNEMSVMG---IHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEA 694

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LI  + R   +++A  +   M++ G + + V YN+ I        V+ AL   + M+
Sbjct: 695 YNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQML 754

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ + P+  TY++L  GL   G + +  +L +++ E  +  DA +Y+ LI+   K  N  
Sbjct: 755 NEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKK 814

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            + +L   M+ +G +P   TY  LI  + K G ++ A ++   M+     P+   Y+ +I
Sbjct: 815 ESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874

Query: 507 NGLC 510
            G C
Sbjct: 875 CGWC 878



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 2/187 (1%)

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           ++P ++ +  LI  +   G +     +Y  M      PN+  +N +++  CK  +L  A 
Sbjct: 6   IVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILAL 65

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            LL+       +D +TYNT+I G+  +G + +AF   S M       + +  NIL+   C
Sbjct: 66  DLLRNVDV--EVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFC 123

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           + G  +    +M  ++  G   D + + TL+  + K       ++L + M   G+  D  
Sbjct: 124 RIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIV 183

Query: 640 TYNAIIS 646
           +YN +I+
Sbjct: 184 SYNTLIN 190


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 306/645 (47%), Gaps = 72/645 (11%)

Query: 54  MAPSLTNSLVNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDD 112
           +   L +  V  ++ E   +S  L++ F+  + +   F HS  S+  + H+L   RRF +
Sbjct: 43  LVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKE 102

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
             +++  L+           EG    +E   +T  V+D L+   +++   + +  +++K+
Sbjct: 103 LQVILEQLLQE---------EGTFRKWE---STGLVWDMLLFLSSRLRMVDDSLYILKKM 150

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           K +  +VS  ++N+ L H     E  + W +YKE+      +N +T++ V+  LC++ KL
Sbjct: 151 KDQNLNVSTQSYNSVLYH---FRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKL 203

Query: 233 EEAL-----------------------------------SLYYRMLKSGIWPNVVCFNMI 257
           E+A+                                   S +  +LK G+ P+V   N++
Sbjct: 204 EDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNIL 263

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           IN  C VG +  AL+L      M+   V P+SVT+N +  GF  LG +  A E+   M+ 
Sbjct: 264 INGLCLVGSIAEALELASD---MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST-IHWLFAEGDVE 376
            G+  +V TY  L+ G  + G+ +  L L  +M+ RG   N+++  S  +  L   G ++
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL + + M    + PD   YSI+  GLC+ G    A  L++++ ++ ++ ++ ++  L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LC+   L  A+ LL S+I  G   DI+ Y  +IDGY K G IE A+++++ + +    
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
           P++  +NS+I G CK  ++  A+ +L   +  GL  + ++Y TL++ Y   G       +
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKF----GC--------YQQARELMKVMILHGIIPDY 603
             EM+  GI    V Y+++   LC+      C        +++ ++ ++ M   GI PD 
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +TY T++    +           + M    +   + TYN +I  L
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 158/658 (24%), Positives = 294/658 (44%), Gaps = 72/658 (10%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV----NWRRFDD 112
           S +  LV+ V++  R+  +L +     + E   F    ES+  +  +L+      R  DD
Sbjct: 84  SFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTF-RKWESTGLVWDMLLFLSSRLRMVDD 142

Query: 113 ALLLMGNLMSAN-SVSPLEF---------LEGLLDSY-EICKATPAVFDALVRACTQIGA 161
           +L ++  +   N +VS   +          + + D Y EI       +  +V    +   
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQK 202

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            E A   ++  + K    S+ ++N+ +S   KL  +      +  ++ CG V +V + N+
Sbjct: 203 LEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNI 262

Query: 222 VIYALCKECKLEEALSLYYRMLK-----------------------SGIW---------- 248
           +I  LC    + EAL L   M K                       SG W          
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322

Query: 249 --PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG---DSVLPNSVTHNCIINGFCKLG 303
             P+V+ + +++   CQ+G+++  L L + M +  G   +S++P SV    +++G CK G
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSGLCKTG 377

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R++ A  +   M   G+  ++  Y+ +I G  + G  + AL L DEM  + ++PN+  + 
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + +  L  +G +  A  +L  +I      D   Y+I+  G  ++GC+++A +L   V+E 
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +     ++N LI   CK+ N+A A+++L  + + GL P +++Y TL+D Y   GN +  
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLC------------KDASLDAAKSLLQASQRIGL- 530
            ++   MK     P  V Y+ I  GLC            ++   +  K  L+  +  G+ 
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITYNT+I        ++ AF     M++  +  +   YNILI+ LC +G  ++A   
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  +    +      YTTL+        PE  ++L   ++  G +   + Y+A+I+ L
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 215/448 (47%), Gaps = 17/448 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             ++ L +    +G   GA++VI+ +  KG S  +  +   L    +L  I     L K+
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352

Query: 207 MVSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           M+S G+ + ++   ++++  LCK  +++EALSL+ +M   G+ P++V ++++I+  C++G
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
             + AL L+ +M       +LPNS TH  ++ G C+ G +  A  +  ++I +G   ++ 
Sbjct: 413 KFDMALWLYDEM---CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            Y  +IDGYA+ G  EEAL L   +++ G+ P+   +NS I+      ++  A  +L  +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK---- 441
               + P   +Y+ L       G  K   +L  ++  E +     +Y+++   LC+    
Sbjct: 530 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 589

Query: 442 --------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
                          KQ L  M   G+ PD ITY T+I   C+  ++ GA    E MK  
Sbjct: 590 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 649

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
               +   YN +I+ LC    +  A S + + Q   + L    Y TLI  + + G    A
Sbjct: 650 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 709

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCK 580
             +F ++ + G  V+   Y+ +IN LC+
Sbjct: 710 VKLFHQLLHRGFNVSIRDYSAVINRLCR 737


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 177/688 (25%), Positives = 314/688 (45%), Gaps = 62/688 (9%)

Query: 11  KSNSPLSRAFHVGKQFANPSTED--IVFRAICV-NLRQRKWKILEQMAPSLTNSLVNRVV 67
           ++N P        K+  NPS E   +V+ +    N    K  +L        ++ V  V+
Sbjct: 20  RNNKPFCSQSQFPKESENPSQEQRLLVYGSTSEENPVTSKVSLLSAKPEQKDDASVIDVL 79

Query: 68  SEFRKSPKLALEFYTWVGENNRFSHSLESS---CAIVHLLVN----WRRFDDALLLMGNL 120
              R +P+ AL FY W      +  S E       ++H+LV+    + R  D L+     
Sbjct: 80  LNRRNNPEAALRFYNWA---RPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI---RY 133

Query: 121 MSANSVSPLE--FLEGLLDSYEIC--KATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           +S ++ +P+    +  L+DS +    +     F+ L+ A ++   T+ A D++ ++ ++ 
Sbjct: 134 VSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM-LEL 192

Query: 177 HSVSIHAW-NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
             +    + N  LS LV+ N +    +LY  MV+ G   +  T  L++ A  +E K  EA
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEA 252

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L +  R ++ G  P+ + +++ +   C+  DL  A  L R+M        +P+  T+  +
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK--EKKLCVPSQETYTSV 310

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I    K G ++ A  ++  M+  GI  NV    +LI G+ +      AL L D+M K G 
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN+V ++  I W    G++E AL     M    + P  F    + +G  +    ++A K
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L ++  E  +  + +  N ++++LCK      A +LLS M  RG+ P++++Y  ++ G+C
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489

Query: 476 KGGNIEGAVQVYENMKKVEKKP-----------------------------------NLV 500
           +  N++ A  V+ N+ +   KP                                   N V
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549

Query: 501 IYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           +Y +IINGLCK      A+ LL     ++   +  ++YN++I+G+F  G++  A A + E
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   GI+ N + Y  L+N LCK     QA E+   M   G+  D   Y  L+  F K  +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            E    L  +++  G++P    YN++IS
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLIS 697



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 248/485 (51%), Gaps = 6/485 (1%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +  K++ +G S +   ++  +    K  E+ +  + YK+M   G   +V   + +I    
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K  K EEAL L+    ++G+    VC N I++  C+ G  + A +L  KM       + P
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKM---ESRGIGP 476

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N V++N ++ G C+   ++ A  +   +++ G+  N  TY+ LIDG  R    + AL + 
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID-KHICPDHFTYSILTKGLCR 406
           + M    +  N VVY + I+ L   G    A  +L++MI+ K +C    +Y+ +  G  +
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A   + ++    +  +  +Y  L+N LCK+N +  A ++   M  +G+  DI  
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           YG LIDG+CK  N+E A  ++  + +    P+  IYNS+I+G     ++ AA  L +   
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           + GL  D  TY TLI+G   +G +  A  +++EM+ VG+  +++ Y +++N L K G + 
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +  ++ + M  + + P+ + Y  ++    +  + +E   LHD+M+  G+ PD  T++ ++
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836

Query: 646 SPLLG 650
           S  +G
Sbjct: 837 SGQVG 841



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 247/510 (48%), Gaps = 28/510 (5%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           +E+  PS  +   + ++  FRK+ ++  ALEFY  + E    + S+     I+   +  +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGWLKGQ 423

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           + ++AL L                    +S+E   A   V + ++    + G T+ A ++
Sbjct: 424 KHEEALKLFD------------------ESFETGLANVFVCNTILSWLCKQGKTDEATEL 465

Query: 169 IQKLKVKGHSVSIHAWNN-FLSHLVKLN-EIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           + K++ +G   ++ ++NN  L H  + N ++ R   ++  ++  G   N  T++++I   
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI--VFSNILEKGLKPNNYTYSILIDGC 523

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
            +    + AL +   M  S I  N V +  IIN  C+VG    A +L   M  +    + 
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM--IEEKRLC 581

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            + +++N II+GF K G ++ A      M   GI  NV TY +L++G  +    ++AL +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            DEM  +G+  +   Y + I       ++E A  + S+++++ + P    Y+ L  G   
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A  L+ ++L++ +  D  +Y  LI+ L K  NL  A +L + M   GL+PD I 
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  +++G  K G     V+++E MKK    PN++IYN++I G  ++ +LD A  L     
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAM 555
             G+L D  T++ L++G   N +   A ++
Sbjct: 822 DKGILPDGATFDILVSGQVGNLQPVRAASL 851



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 187/404 (46%), Gaps = 4/404 (0%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G   N   FN ++N   +    + A+ +  +M  +    V+P     N  ++   +   +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELD---VIPFFPYVNRTLSALVQRNSL 214

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A+E+   M+  G+D +  T   L+    R     EAL +    ++RG  P++++Y+  
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA 274

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
           +       D+  A  +L +M +K +C P   TY+ +     + G +  A +L +++L + 
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  +  +   LI   CK+N+L +A  L   M   G  P+ +T+  LI+ + K G +E A+
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYF 544
           + Y+ M+ +   P++   ++II G  K    + A  L   S   GL +    NT+++   
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLC 454

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             GK  EA  + S+M + GI  N V YN ++   C+      AR +   ++  G+ P+  
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           TY+ L+    +N   +  +E+ + M  S +  +   Y  II+ L
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 3/262 (1%)

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           ++ L     ++     A  + NQ+LE  ++      N  ++ L + N+L  AK+L S M+
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G+  D +T   L+    +      A++V     +   +P+ ++Y+  +   CK   L 
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285

Query: 517 AAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
            A SLL+    +++ +    TY ++I      G + +A  +  EM + GI++N V    L
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I   CK      A  L   M   G  P+ VT++ L+  F KN   E+ +E +  M + G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405

Query: 635 SPDNQTYNAIISPLL-GEKSAE 655
           +P     + II   L G+K  E
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEE 427


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 164/596 (27%), Positives = 271/596 (45%), Gaps = 81/596 (13%)

Query: 9   LYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVS 68
            Y   S + R++  G    N S E I   A     ++     LE + P L+ +++  V+ 
Sbjct: 13  FYSKPSWMQRSYSSGNAEFNISGEVISILAK----KKPIEPALEPLVPFLSKNIITSVIK 68

Query: 69  EFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL-------VNWRRFDDALLLMGNLM 121
           E   + +L   F+ W     R   S ES   ++ +L       + W+  ++        +
Sbjct: 69  E-EVNRQLGFRFFIWASRRERL-RSGESFGLVIDMLSEDNGCDLYWQTLEE--------L 118

Query: 122 SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
            +  VS        +DSY  C         L+ A  ++G  E A +   ++K       +
Sbjct: 119 KSGGVS--------VDSYCFC--------VLISAYAKMGLAEKAVESFGRMKEFDCRPDV 162

Query: 182 HAWNNFLSHLVKLNEIGRF-WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
             +N  L  +++ +      + +Y EM+ C    N+ TF +++  L K+ +  +A  ++ 
Sbjct: 163 FTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFD 222

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M   GI PN V + ++I+  CQ G  E A KLF +M   SG+   P+SV HN +++GFC
Sbjct: 223 DMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKA-SGN--YPDSVAHNALLDGFC 279

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           KLGR+  A E+     K G    +R Y++LIDG  R     +A  L   M+KR + P+ +
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDII 339

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +Y   I  L   G +E AL +L  M  K I PD + Y+ + K LC  G +++   L  ++
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E     DA ++ ILI  +C++  +  A+++   +   G  P + T+  LIDG CK G +
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGEL 459

Query: 481 EGA------------------------------------VQVYENMKKVEK---KPNLVI 501
           + A                                    ++ Y+N+         P++V 
Sbjct: 460 KEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVS 519

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           YN +ING C++  +D A  LL   Q  GL  D++TYNTLING    G+  EAF +F
Sbjct: 520 YNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 224/500 (44%), Gaps = 71/500 (14%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS----GIWPNVVCFNM 256
           W   +E +  G      +F LVI  L ++        LY++ L+     G+  +  CF +
Sbjct: 82  WASRRERLRSG-----ESFGLVIDMLSED----NGCDLYWQTLEELKSGGVSVDSYCFCV 132

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY--- 313
           +I+   ++G  E A++ F   G M      P+  T+N I+       R+   E++ +   
Sbjct: 133 LISAYAKMGLAEKAVESF---GRMKEFDCRPDVFTYNVIL-------RIMMREDVFFMLA 182

Query: 314 -----AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
                 M+K     N+ T+  L+DG  + G + +A ++ D+M  RG+ PN V Y   I  
Sbjct: 183 FAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L   G  E A  +  +M      PD   ++ L  G C+ G + +AF+L     ++  V  
Sbjct: 243 LCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              Y+ LI+ L ++     A +L ++M+ R + PDII Y  LI G  K G IE A+++  
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLR 362

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFING 547
           +M      P+   YN++I  LC    L+  +SL L+ S+     DA T+  LI     NG
Sbjct: 363 SMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM---------------- 591
            + +A  +F E+   G + +   +N LI+ LCK G  ++AR L+                
Sbjct: 423 LVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLA 482

Query: 592 -------KVMILHGII----------------PDYVTYTTLVTRFSKNCSPEEVIELHDD 628
                    M+  G I                PD V+Y  L+  F +    +  ++L + 
Sbjct: 483 HSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNV 542

Query: 629 MVLSGVSPDNQTYNAIISPL 648
           + L G+SPD+ TYN +I+ L
Sbjct: 543 LQLKGLSPDSVTYNTLINGL 562



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 2/278 (0%)

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
            L ++    +  D + + +L     + G  ++A +   ++ E     D ++YN+++  + 
Sbjct: 114 TLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMM 173

Query: 441 KSN-NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           + +     A  + + M+     P++ T+G L+DG  K G    A +++++M      PN 
Sbjct: 174 REDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSE 558
           V Y  +I+GLC+  S + A+ L    +  G   D++ +N L++G+   G++ EAF +   
Sbjct: 234 VTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
               G  +   GY+ LI+ L +   Y QA EL   M+   I PD + YT L+   SK   
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGK 353

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            E+ ++L   M   G++PD   YNA+I  L G    E+
Sbjct: 354 IEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEE 391



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 183/443 (41%), Gaps = 66/443 (14%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           E + F   L    +++  L   RR+  A  L  N++  N                  K  
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRN-----------------IKPD 337

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK--LNEIGRFWKL 203
             ++  L++  ++ G  E A  +++ +  KG +   + +N  +  L    L E GR  +L
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             EM       +  T  ++I ++C+   + +A  ++  + KSG  P+V  FN +I+  C+
Sbjct: 398 --EMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCK 455

Query: 264 VGDLEFALKLFRKM---------------GVMSGDSVL---------------------P 287
            G+L+ A  L  KM               G  S D+++                     P
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSP 515

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           + V++N +INGFC+ G ++ A ++   +   G+  +  TY TLI+G  R G  EEA +L 
Sbjct: 516 DIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
               K     +  VY S + W      +  A  +    + K  C D  T + + +   + 
Sbjct: 576 --YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCF-KE 632

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYS---YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           G  ++A +   +++E     D  +   Y I +  LC+S     A  + S +  + ++   
Sbjct: 633 GETERALR---RLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTP 689

Query: 465 ITYGTLIDGYCKGGNIEGAVQVY 487
            +   LI G CK   ++ A+ V+
Sbjct: 690 PSCVKLIHGLCKREQLDAAIDVF 712


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 221/423 (52%), Gaps = 4/423 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C  +H L   + F +A  L+  ++S     S       +L++    ++ 
Sbjct: 1   NSTFRHTLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSD 60

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  Y+
Sbjct: 61  IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYE 120

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CK+  +  A  ++  + K G+ P+VV +N ++N   ++G
Sbjct: 121 EILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLG 180

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK   ++ A E+   M+  G+  N  
Sbjct: 181 DLDEG---FRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ ++ L  +GD+  A  ++ +M
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 357

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P +V YN +
Sbjct: 358 XDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVL 417

Query: 506 ING 508
           +NG
Sbjct: 418 MNG 420



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 159/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 120 EEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRL 179

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 180 GDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTF 239

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+J+ YN+++ GLCK   L+ A  L+     
Sbjct: 240 TTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXX 299

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 300 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXD 359

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M  +G  P   TYN +++
Sbjct: 360 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMN 419



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 155/285 (54%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A  +  A+ K G+  +V +Y TL++GY R G  +E  RL   M  
Sbjct: 135 NILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRA 194

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 195 SGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 254

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN L+  LCK  +L  A  L+  M  +GL PD  TY TLID
Sbjct: 255 AMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLID 314

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 315 GCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKP 374

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G     V YN+L+N
Sbjct: 375 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMN 419



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A  +  ++   GL P +++Y TL
Sbjct: 113 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTL 172

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 173 MNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGL 232

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN L+  LCK G   QA  
Sbjct: 233 VPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHG 292

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M   G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 293 LIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLC 352

Query: 650 GEKSAED 656
            E  + D
Sbjct: 353 QEGRSXD 359



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 1/255 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 60  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFY 119

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 120 EEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRL 179

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A +  G+  D  TY+ LING      + +A  +F EM   G+  N V +
Sbjct: 180 GDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTF 239

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TLV    K     +   L D+M  
Sbjct: 240 TTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXX 299

Query: 632 SGVSPDNQTYNAIIS 646
            G+ PD  TY  +I 
Sbjct: 300 KGLKPDKFTYTTLID 314


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/609 (26%), Positives = 291/609 (47%), Gaps = 10/609 (1%)

Query: 5   FCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN 64
           +     +++  L R    G     P   + V R + +     +++ L  ++   ++ L+N
Sbjct: 19  YTRSFSEASRTLRRELRGGNGRIRPELLERVSRLLVLG----RYEALHDLSLDFSDELLN 74

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
            ++   R +P+  LE +    +  +F    ++ C +VH+L   R +      +  L++ N
Sbjct: 75  SILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALN 134

Query: 125 SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
               + + E L+  ++    +P VFD +++   + G  + A  V   +   G   S+ + 
Sbjct: 135 HSGFVVWGE-LVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSC 193

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N+ LS+LV+  E      +Y +M+S     +V T ++V+ A C+   +++A+        
Sbjct: 194 NSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETES 253

Query: 245 S-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           S G+  NVV +N +IN    +GD+E   ++ R   +MS   V  N VT+  +I G+CK G
Sbjct: 254 SLGLELNVVTYNSLINGYAMIGDVEGMTRVLR---LMSERGVSRNVVTYTSLIKGYCKKG 310

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            +E AE +   + +  +  +   Y  L+DGY R G   +A+R+ D M++ G+  N  + N
Sbjct: 311 LMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN 370

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I+     G +  A  + S M D  + PDH TY+ L  G CR G V +A KL +Q+ ++
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK 430

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +V    +YNIL+    +         L   M+ RG+  D I+  TL++   K G+   A
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLING 542
           ++++EN+       + +  N +I+GLCK   ++ AK +L          A+ TY  L +G
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG 550

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y+  G + EAFA+   M   GI      YN LI+   K+    +  +L+  +   G+ P 
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610

Query: 603 YVTYTTLVT 611
             TY  L+T
Sbjct: 611 VATYGALIT 619



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 252/574 (43%), Gaps = 35/574 (6%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F+   ESS  +   +V +    +   ++G++     V  L    G+             +
Sbjct: 247 FAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGV-------SRNVVTY 299

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
            +L++   + G  E A  V + LK K      H +   +    +  +I    +++  M+ 
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   N    N +I   CK  +L EA  ++ RM    + P+   +N +++  C+ G ++ 
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           ALKL  +M       V+P  +T+N ++ G+ ++G       +   M+K G++ +  + +T
Sbjct: 420 ALKLCDQM---CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L++   + G   EA++L + ++ RGL+ + +  N  I  L     V  A  +L ++    
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P   TY  L+ G  + G +K+AF +   +  + +      YN LI+   K  +L    
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            L+  +  RGL P + TYG LI G+C  G I+ A      M +     N+ I + I N L
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656

Query: 510 CKDASLDAAKSLLQASQRIGLLDAITYNTLINGY-----FING---------KIAEAFAM 555
            +   +D A  LLQ          + ++ L+ GY     F+           KIAE+   
Sbjct: 657 FRLDKIDEACLLLQK--------IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVEN 708

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG-IIPDYVTYTTLVTRFS 614
            +  +   +  N + YN+ I  LCK G  + AR+L   ++     IPD  TYT L+   +
Sbjct: 709 STPKK--LLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                 +   L D+M L G+ P+  TYNA+I  L
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 217/468 (46%), Gaps = 28/468 (5%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           H +N  +    +   +    KL  +M     V  V T+N+++    +     + LSL+  
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           MLK G+  + +  + ++    ++GD   A+KL+  +       +L +++T N +I+G CK
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV---LARGLLTDTITLNVMISGLCK 518

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           + +V  A+EI   +        V+TY  L  GY + G+ +EA  + + M ++G+ P   +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I   F    +     ++ ++  + + P   TY  L  G C  G + +A+    +++
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN-I 480
           E+ +  +    + + N L + + +  A  LL           I+ +  L+ GY      +
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQK---------IVDFDLLLPGYQSLKEFL 689

Query: 481 EGAVQVYENMKKVEKK-----------PNLVIYNSIINGLCKDASLDAAKSL---LQASQ 526
           E +       +K+ +            PN ++YN  I GLCK   L+ A+ L   L +S 
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R  + D  TY  LI+G  I G I +AF +  EM   GI  N V YN LI  LCK G   +
Sbjct: 750 RF-IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           A+ L+  +   GI P+ +TY TL+    K+ +  E + L + M+  G+
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 210/484 (43%), Gaps = 92/484 (19%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++ L++  ++IGA      + + +  +G +    + +  L  L KL +     KL+
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494

Query: 205 KEMVSCGYVENVNTFNLVIYALCK-----------------ECK---------------- 231
           + +++ G + +  T N++I  LCK                  CK                
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554

Query: 232 --LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
             L+EA ++   M + GI+P +  +N +I+ A +   L     L  ++       + P  
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL---RARGLTPTV 611

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+  +I G+C +G ++ A    + MI+ GI  NV   + + +   R    +EA  L  +
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 671

Query: 350 MV--------------------------------------KRGLMPNNVVYNSTIHWLFA 371
           +V                                      K+ L+PNN+VYN  I  L  
Sbjct: 672 IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCK 731

Query: 372 EGDVEGALFVLSDMI--DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
            G +E A  + SD++  D+ I PD +TY+IL  G    G + +AF L +++  + ++ + 
Sbjct: 732 AGKLEDARKLFSDLLSSDRFI-PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YN LI  LCK  N+  A++LL  +  +G+ P+ ITY TLIDG  K GN+  A+++ E 
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKS-LLQASQRIGLLDAITYNTLINGYFINGK 548
           M          I   ++ G  K   +D  K  +L    ++G    I  N+  N  +   +
Sbjct: 851 M----------IEKGLVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNS--NELYDVRR 898

Query: 549 IAEA 552
           ++EA
Sbjct: 899 VSEA 902


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 255/516 (49%), Gaps = 24/516 (4%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           LV A +Q+   + A  V  +L+      ++ A N  L  LVK + + R W+L+ EM+  G
Sbjct: 112 LVIALSQMALPDEALSVFGRLR---ELPALPACNAILDGLVKAHMLARVWELFDEMLGRG 168

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ---VGDLE 268
            V +V T+N +I A   +  + +A  ++ +M+   I PNVV +  +I   C+   +GD E
Sbjct: 169 MVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAE 228

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
                 ++ G+       PN  T+N +++   K   ++ A    Y ++K G+  N   + 
Sbjct: 229 GLFLEMKEAGMR------PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFT 282

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLIDG  +     EA  +  +M +  + P   VYNS IH  F  G  + AL    ++I K
Sbjct: 283 TLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRK 342

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD FT SI+ +GLC  G ++ A +    + +  +  +A +YN+LI+  CKS NL  A
Sbjct: 343 ELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEA 402

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
               + M   G+ P+++TY +LIDG+ K G +E A+ +Y  M     +PN+V Y ++I+G
Sbjct: 403 LVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHG 462

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM-------R 560
             K+  +DAA  L +  +  G+  +AIT + L++G     ++ +A     E        +
Sbjct: 463 HAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEK 522

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           N  IA N V Y  LI  L   G Y +A      M   G++PD  TYT ++          
Sbjct: 523 NPSIA-NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             + L+ DMV  GV P   T  A++ P +  + + D
Sbjct: 582 NAMMLYADMVKVGVKP---TKCAMVCPDIWSRESVD 614



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 167/366 (45%), Gaps = 36/366 (9%)

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            ++DG  +         L DEM+ RG++P+ V YN+ I+    +GDV  A  V   M+ +
Sbjct: 143 AILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVAR 202

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I P+  TY+ +   LC   C+  A  L  ++ E  M  + Y+YN L++   K +N+  A
Sbjct: 203 RIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHA 262

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
                 ++  GL+P+ + + TLIDG CK   I  A  ++ +M + E  P + +YNS+I+G
Sbjct: 263 LVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHG 322

Query: 509 -----------------------------------LCKDASLDAAKSLLQASQRIGL-LD 532
                                              LC    +  A   L+  Q+ G+ L+
Sbjct: 323 AFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALN 382

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           A  YN LI+ Y  +G + EA    + M  VG+  N V Y+ LI+   K G  + A  +  
Sbjct: 383 AAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYT 442

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            M+  G+ P+ VTYT L+   +KN   +    L  +M   G+  +  T + ++  L  E 
Sbjct: 443 EMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCREN 502

Query: 653 SAEDQV 658
             +D V
Sbjct: 503 RVQDAV 508


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 243/479 (50%), Gaps = 12/479 (2%)

Query: 156 CTQIGATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           C Q G  + A ++++++  + G +  +  + + +  L +  ++ R  ++ +EM   G   
Sbjct: 56  CKQ-GEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEP 114

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +  TF+ +I   C   K++EAL LY  +L S    + V  + +I   C+   +  A +LF
Sbjct: 115 DKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF 174

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC--NVRTYATLID 332
           ++M +    +  P+ VT+  +I+GFCK G +E A  ++   +  G  C  NV TY++L+ 
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKA--MKMLGVMEGRKCVPNVVTYSSLLH 232

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  + G  ++AL L   M  +G +PN V Y + IH L A   V+ A  ++ +M     CP
Sbjct: 233 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT-ATCCP 291

Query: 393 -DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
            D  +Y+ L  G CR G +++A +L  ++  +  + D  +Y  L+   C ++ L  A+ L
Sbjct: 292 ADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFL 351

Query: 452 LSSM-IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L +M    G+ PD++TY  ++ GY +      A +  + M      PN V Y+S+I+GLC
Sbjct: 352 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 411

Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           K   ++ A  +L   + +   D +TY  +I G     +  EA  +  EM N  +  +   
Sbjct: 412 KAGRVNHAMEVL---KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGT 468

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           +N +I  LC+ G   +A +L+  M  HG+ P  VTYTTL+  FS+    E   EL + M
Sbjct: 469 FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 527



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 220/413 (53%), Gaps = 10/413 (2%)

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           ++  + PN   +N+++N  C+      A ++ ++M    G SV P+ VT++ +INGFCK 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEM--RDGKSVAPDLVTYSTVINGFCKQ 58

Query: 303 GRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           G ++ A EI   M+ + G+  +V TY +++DG  R G  + A  +  EM  +G+ P+   
Sbjct: 59  GEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFT 118

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +++ I        V+ AL +  +++      D  + S L  GLCR   + +A++L  Q +
Sbjct: 119 FSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELF-QEM 177

Query: 422 EEHMVG----DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           E    G    D  +Y  LI+  CKS NL  A ++L  M  R  +P+++TY +L+ G CK 
Sbjct: 178 EMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 237

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITY 536
           G+++ A+ ++  M      PN+V Y ++I+GLC    +DAA+ L+ + +      D ++Y
Sbjct: 238 GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSY 297

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-I 595
           N L++GY   G+I EA  +F EM       +++ Y  L+   C     ++AR L++ M  
Sbjct: 298 NALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 357

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             GI PD VTY+ +V  +S+     E  E   +M+   V+P+  TY+++I  L
Sbjct: 358 AAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 234/474 (49%), Gaps = 14/474 (2%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV-ENVNTFNLVIYALCKECKLEEALSLYY 240
             +N  ++ L K     + +++ KEM     V  ++ T++ VI   CK+ +++ A  +  
Sbjct: 10  RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69

Query: 241 RML-KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            M+ + G+ P+VV +  +++  C+ G ++ A ++ R+M +     V P+  T + +I G+
Sbjct: 70  EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKL---KGVEPDKFTFSALITGW 126

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR---GLM 356
           C   +V+ A ++   ++ +    +  + + LI G  R     EA  L  EM  R      
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ V Y + I      G++E A+ +L  M  +   P+  TYS L  GLC+ G + QA  L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++  +  V +  +Y  LI+ LC ++ + AA+ L+  M       D ++Y  L+DGYC+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA--I 534
            G IE A Q+++ M      P+ + Y  ++ G C  + L+ A+ LL+  +    +D   +
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TY+ ++ GY    +  EA     EM    +A N V Y+ LI+ LCK G    A E++K  
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK-- 424

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             +   PD VTYT ++         EE + L ++MV   V P   T+N++I  L
Sbjct: 425 --NVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 259/510 (50%), Gaps = 44/510 (8%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA----NSVSPLEFLEGLLDSYEI 141
           E ++F+ S     A++    N R+ D+AL L   ++++    ++VS    + GL     I
Sbjct: 113 EPDKFTFS-----ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRI 167

Query: 142 CKA---------------TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
            +A                P V  + AL+    + G  E A  ++  ++ +    ++  +
Sbjct: 168 GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 227

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           ++ L  L K  ++ +   L++ M S G V NV T+  +I+ LC   K++ A  L   M  
Sbjct: 228 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           +    + V +N +++  C++G +E A +LF++M   +  S LP+ +T+ C++ GFC   R
Sbjct: 288 TCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM---AAKSCLPDRITYTCLVRGFCNASR 344

Query: 305 VEFAEEIRYAM-IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           +E A  +   M   AGID +V TY+ ++ GY+R     EA     EM+ R + PN V Y+
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 404

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L   G V  A+ VL + +DK   PD  TY+I+ +GLC     ++A  L  +++ +
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKN-VDK---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +     ++N +I  LC+  ++  A +LL +M   GL P ++TY TL++G+ + G +E A
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520

Query: 484 VQVYENMKKVEKK----PNLV---IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITY 536
            +++E M++  KK     NLV    ++++I GLCK   +D A ++++   R    +    
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVE-ELRSRECEPAEE 579

Query: 537 NTL--INGYFINGKIAEAFAMFSEMRNVGI 564
           + L  ++G    G+  EA  + + +  VG+
Sbjct: 580 DCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 247/492 (50%), Gaps = 16/492 (3%)

Query: 162 TEGAYDVIQKLKVKGHSVS--IHAWNNFLSHLVKLNEIGRFWKLYKEMVSC-GYVENVNT 218
           T  AY+V+++++  G SV+  +  ++  ++   K  E+ R  ++ +EMV+  G   +V T
Sbjct: 25  TSKAYEVLKEMR-DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVT 83

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +  V+  LC++ K++ A  +   M   G+ P+   F+ +I   C    ++ ALKL+++  
Sbjct: 84  YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKE-- 141

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI--RYAMIKAGI-DCNVRTYATLIDGYA 335
           +++    L ++V+ + +I G C+  R+  A E+     M + G    +V TY  LIDG+ 
Sbjct: 142 ILTSSCRL-DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFC 200

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G+ E+A+++   M  R  +PN V Y+S +H L   GD++ AL +   M  K   P+  
Sbjct: 201 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 260

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           TY+ L  GLC    V  A  L +++       D  SYN L++  C+   +  AKQL   M
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM 320

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDAS 514
             +  +PD ITY  L+ G+C    +E A  + ENMK      P++V Y+ ++ G  +   
Sbjct: 321 AAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 380

Query: 515 -LDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
            ++AA+ + +   R    +A+TY++LI+G    G++  A  +   +    +    V Y I
Sbjct: 381 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDV----VTYTI 436

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I  LC     ++A  L++ M+   + P   T+ +++    +    +E  +L   M   G
Sbjct: 437 VIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 496

Query: 634 VSPDNQTYNAII 645
           + P   TY  ++
Sbjct: 497 LEPGMVTYTTLL 508



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 5/160 (3%)

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIG---LLDAITYNTLINGYFINGKIAEAF 553
           PN   YN ++NGLCK      A  +L+   R G     D +TY+T+ING+   G++  A 
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLK-EMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 554 AMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
            +  EM    G+A + V Y  +++ LC+ G   +A E+++ M L G+ PD  T++ L+T 
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +      +E ++L+ +++ S    D  + +A+I+ L  E+
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRER 165


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 223/457 (48%), Gaps = 4/457 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+   A F  L++     G    A  +  K+  +G    +  +   ++ L K        
Sbjct: 140 CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI 199

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L + M       +V  +  +I++LCK+ +  +A +L+  M+  GI PN+V  N ++   
Sbjct: 200 RLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYAL 259

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C +G+ +    L  +M       ++PN+++   +++  CK G V  A ++   M ++G++
Sbjct: 260 CNLGEWKHVNTLLNEM---VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY  LIDG+      +EA+++ D MV +G  PN   YN+ I+       ++ A+++
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  + + P+  TY+ L  GLC  G ++ A  L  +++    + D  +Y IL++YLCK
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK 436

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L  A  LL ++    L PDI  Y  +IDG C+ G +E A  ++ N+     KPN+  
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496

Query: 502 YNSIINGLCKDASLD-AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN + +GLCK   LD A K  ++  +     D  TYNT+  G+  N + + A  +  EM 
Sbjct: 497 YNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
             G + +     +L+  L   G  Q     ++ M  H
Sbjct: 557 ARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPH 593



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 229/465 (49%), Gaps = 4/465 (0%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N F S  +  N +      +  M+      ++  F  ++ ++ K  +    LSL  +M  
Sbjct: 43  NRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDS 102

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            GI  NV   N++IN  C +  + FA  +  K+  +      P++ +   +I G C  G+
Sbjct: 103 FGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQ---PDTASFTTLIKGLCLEGQ 159

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A  +   MI  G   +V  YATLI+G  + G +  A+RL   M K    P+ VVY +
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            IH L  +     A  + S+MI K I P+  T + L   LC  G  K    L N++++  
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           ++ +A S   +++ LCK   +A A  ++  M   G+ PD++TY  LIDG+C    ++ AV
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
           +V++ M      PN+  YN++ING CK   +D A  L +   R  L+ + +TYNTLI+G 
Sbjct: 340 KVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGL 399

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G++ +A A+F EM   G   + V Y IL+++LCK     +A  L+K +    + PD 
Sbjct: 400 CHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDI 459

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             YT ++    +    E+  +L  ++   G+ P+  TYN +   L
Sbjct: 460 QIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGL 504



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 243/506 (48%), Gaps = 6/506 (1%)

Query: 146 PAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P++ D   ++ + T++        + +K+   G   +++  N  ++    LN +   + +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             +++  G   +  +F  +I  LC E ++ EAL L+ +M+  G  P+VV +  +IN  C+
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G    A++L R M      +  P+ V +  +I+  CK  +   A  +   MI  GI  N
Sbjct: 192 TGHTSAAIRLLRSM---EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPN 248

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + T  +L+      G  +    L +EMV   +MPN +   + +  L  EG V  A  V+ 
Sbjct: 249 IVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVD 308

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M    + PD  TY+ L  G C    + +A K+ + ++ +    + +SYN LIN  CK  
Sbjct: 309 MMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIE 368

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  L   M  + LIP+ +TY TLI G C  G ++ A+ ++  M    + P+LV Y 
Sbjct: 369 RMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYR 428

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +++ LCK+  LD A +LL+A +   L  D   Y  +I+G    G++ +A  +FS + + 
Sbjct: 429 ILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSK 488

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N   YNI+ + LCK G   +A +L   M  +    D  TY T+   F +N      
Sbjct: 489 GLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRA 548

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
           I+L ++M+  G S D  T   ++  L
Sbjct: 549 IQLLEEMLARGFSCDVSTTTLLVGML 574



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 227/471 (48%), Gaps = 4/471 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +   L+ + K+        L ++M S G   NV T N++I + C   ++  A S+ 
Sbjct: 73  SIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVL 132

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            ++LK G  P+   F  +I   C  G +  AL LF KM     +   P+ V +  +ING 
Sbjct: 133 AKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM---IWEGFQPDVVIYATLINGL 189

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G    A  +  +M K     +V  Y TLI    +     +A  L  EM+ +G+ PN 
Sbjct: 190 CKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNI 249

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V  NS ++ L   G+ +    +L++M+D  I P+  + + +   LC+ G V QA  + + 
Sbjct: 250 VTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDM 309

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + +  +  D  +Y  LI+  C  + +  A ++   M+ +G  P++ +Y TLI+GYCK   
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A+ ++E M + +  PN V YN++I+GLC    L  A +L +     G + D +TY  
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++    N  + +A A+   +    +  +   Y I+I+ +C+ G  + AR+L   +   G
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + P+  TY  +     K    +E  +L  +M  +  S D  TYN I    L
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFL 540



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 209/427 (48%), Gaps = 6/427 (1%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV- 290
           L++ALS + RML     P++V F  I+    +V      L L RKM        +P++V 
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFG----IPHNVY 110

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +IN FC L RV FA  +   ++K G   +  ++ TLI G    G   EAL L D+M
Sbjct: 111 TLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +  G  P+ V+Y + I+ L   G    A+ +L  M   +  PD   Y  L   LC++   
Sbjct: 171 IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQ 230

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            QAF L ++++ + +  +  + N L+  LC          LL+ M+   ++P+ I+  T+
Sbjct: 231 TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTV 290

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +D  CK G +  A  V + M +   +P++V Y ++I+G C  + +D A  +       G 
Sbjct: 291 VDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGC 350

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             +  +YNTLINGY    ++ +A  +F EM    +  N V YN LI+ LC  G  Q A  
Sbjct: 351 APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIA 410

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L + M+  G IPD VTY  L+    KNC  ++ + L   +  S + PD Q Y  +I  + 
Sbjct: 411 LFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMC 470

Query: 650 GEKSAED 656
                ED
Sbjct: 471 RAGELED 477



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 141/301 (46%), Gaps = 5/301 (1%)

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           NV+ NS  H       V  A  VL+ ++     PD  +++ L KGLC  G + +A  L +
Sbjct: 113 NVLINSFCHL----NRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           +++ E    D   Y  LIN LCK+ + +AA +LL SM      PD++ YGTLI   CK  
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
               A  ++  M      PN+V  NS++  LC         +LL       ++ +AI+  
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T+++     G +A+A  +   M   G+  + V Y  LI+  C      +A ++  +M+  
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G  P+  +Y TL+  + K    ++ + L ++M    + P+  TYN +I  L      +D 
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408

Query: 658 V 658
           +
Sbjct: 409 I 409


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 252/545 (46%), Gaps = 42/545 (7%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P ++D  +   ++ G  E A  +   +   G      A+ + +    +   + + ++L  
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           EM     V +  T+  V+  +C    L+ A ++   M+ SG  PNVV +  +I    Q  
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
               A+++ ++M       + P+   +N +I G  K  R++ A      M++ G+  N  
Sbjct: 467 RFGDAMRVLKEM---KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV------------------------ 361
           TY   I GY        A +   EM + G++PN V+                        
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSM 583

Query: 362 -----------YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
                      Y   ++ LF    V+ A  +  +M  K I PD F+Y +L  G  + G +
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           ++A  + ++++EE +  +   YN+L+   C+S  +  AK+LL  M V+GL P+ +TY T+
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDGYCK G++  A ++++ MK     P+  +Y ++++G C+   ++ A ++   +++   
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI----AVNKVGYNILINFLCKFGCYQQ 586
                +N LIN  F  GK      + + + +         N V YNI+I++LCK G  + 
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A+EL   M    ++P  +TYT+L+  + K     E+  + D+ + +G+ PD+  Y+ II+
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883

Query: 647 PLLGE 651
             L E
Sbjct: 884 AFLKE 888



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/549 (26%), Positives = 265/549 (48%), Gaps = 53/549 (9%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           +P  +  +V+     G  +GAY++++++   G   ++  +   +   ++ +  G   ++ 
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN---EA 261
           KEM   G   ++  +N +I  L K  +++EA S    M+++G+ PN   +   I+   EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            +    +  +K  R+ G      VLPN V    +IN +CK  +V  A     +M+  GI 
Sbjct: 536 SEFASADKYVKEMRECG------VLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGIL 589

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            + +TY  L++G  +    ++A  +  EM  +G+ P+   Y   I+     G+++ A  +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+++ + P+   Y++L  G CR+G +++A +L +++  + +  +A +Y  +I+  CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK--------- 492
           S +LA A +L   M ++GL+PD   Y TL+DG C+  ++E A+ ++   KK         
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769

Query: 493 ------VEK-----------------------KPNLVIYNSIINGLCKDASLDAAKSLLQ 523
                 V K                       KPN V YN +I+ LCK+ +L+AAK L  
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829

Query: 524 ASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             Q   L+   ITY +L+NGY   G+ AE F +F E    GI  + + Y+++IN   K G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889

Query: 583 CYQQARELMKVMILHGIIPD-----YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
              +A  L+  M     + D       T   L++ F+K    E   ++ ++MV     PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949

Query: 638 NQTYNAIIS 646
           + T   +I+
Sbjct: 950 SATVIELIN 958



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 171/644 (26%), Positives = 293/644 (45%), Gaps = 31/644 (4%)

Query: 11  KSNSPLSRAFHVG-KQFANPSTEDIVFRAICVNLRQRKWK---ILEQMAPSLTNSLVNRV 66
           ++N  L R+F V  ++ ++ S E      I   L+Q  W+   +   ++  +   +V  V
Sbjct: 15  RANFLLFRSFSVNVEKLSDASAE------IAGILKQENWRDTLVSSNLSIEINPEVVLSV 68

Query: 67  VSEFR-KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANS 125
           +   R   P   L F+ WV         L+S   +   L N+  F+ AL ++  ++  N 
Sbjct: 69  LRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW 128

Query: 126 VSPLEFLEGLLDSYE-ICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                +   +  S E + K+   V F  L       G  E A  V            +  
Sbjct: 129 PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSR 188

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
               L  L++ N +  FW +YK MV    V +V T++++I A C+   ++    + ++  
Sbjct: 189 CKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K      +              +++ ALKL   M +  G  ++P   T++ +I+G CK+ 
Sbjct: 249 KEFRTATL--------------NVDGALKLKESM-ICKG--LVPLKYTYDVLIDGLCKIK 291

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R+E A+ +   M   G+  +  TY+ LIDG  +G +++ A  L  EMV  G+     +Y+
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             I  +  EG +E A  +   MI   + P    Y+ L +G CR   V+Q ++L  ++ + 
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++V   Y+Y  ++  +C S +L  A  ++  MI  G  P+++ Y TLI  + +      A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           ++V + MK+    P++  YNS+I GL K   +D A+S L      GL  +A TY   I+G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y    + A A     EMR  G+  NKV    LIN  CK     +A    + M+  GI+ D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGD 591

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             TYT L+    KN   ++  E+  +M   G++PD  +Y  +I+
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 161/362 (44%), Gaps = 42/362 (11%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHW----LFAEGDVEGA 378
           +  L DGY   G  EEA+ +    +   L+P      V+ ++ + W    LF +      
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD------ 207

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK---------------------QAFKLH 417
             V   M+++++  D  TY +L    CR G V+                      A KL 
Sbjct: 208 --VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             ++ + +V   Y+Y++LI+ LCK   L  AK LL  M   G+  D  TY  LIDG  KG
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325

Query: 478 GNIEGAVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
            N + A  +   M    +  KP +  Y+  I  + K+  ++ AK+L       GL+  A 
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
            Y +LI GY     + + + +  EM+   I ++   Y  ++  +C  G    A  ++K M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           I  G  P+ V YTTL+  F +N    + + +  +M   G++PD   YN++I  L   K  
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503

Query: 655 ED 656
           ++
Sbjct: 504 DE 505



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 42/342 (12%)

Query: 145 TPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
            P VF    L+   +++G  + A  +  ++  +G + ++  +N  L    +  EI +  +
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EM   G   N  T+  +I   CK   L EA  L+  M   G+ P+   +  +++  C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743

Query: 263 QVGDLEFALKLF--RKMGVMSGDSVL---------------------------------P 287
           ++ D+E A+ +F   K G  S  +                                   P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N VT+N +I+  CK G +E A+E+ + M  A +   V TY +L++GY + G   E   + 
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI-----LTK 402
           DE +  G+ P++++Y+  I+    EG    AL ++  M  K+   D    SI     L  
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           G  + G ++ A K+   ++    + D+ +   LIN  C S+N
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 233/440 (52%), Gaps = 4/440 (0%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V+ +  FN ++ +L K      A+S   +M    I P++  FN++IN  C +G L FA  
Sbjct: 61  VQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFS 120

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +  K+  +      P++VT   +I G C  G+V  A      +I  G   +  +Y TLI+
Sbjct: 121 VLAKIFKLG---FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLIN 177

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  + G +  AL++  ++    + PN V+YN+ I  L  +  V  A  + S+MI K I P
Sbjct: 178 GLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFP 237

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TY+ L  G    G +K+A  L NQ+L +++  D Y++NIL++ LCK   +  A+ +L
Sbjct: 238 DVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVL 297

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           + MI +G+  +I+TY +L+DGY        A  V+  M +    P++  Y+ +INGLCK 
Sbjct: 298 AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKT 357

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +D A +L +      +  + +TYN+LI+G    G+I++A+ + +EM N G   + + Y
Sbjct: 358 KMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITY 417

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           + L++ LCK     +A  L+  +   GI P+  TYT LV    KN   ++   ++ D+++
Sbjct: 418 SSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLI 477

Query: 632 SGVSPDNQTYNAIISPLLGE 651
            G   D + YN +++ L  E
Sbjct: 478 KGYHLDVKMYNVMVNGLCKE 497



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 233/489 (47%), Gaps = 39/489 (7%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           I  +N  LS LVKLN         K+M       ++ TFN++I   C    L  A S+  
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           ++ K G  P+ V    +I   C  G +  AL  F    +  G  +  + V++  +ING C
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALH-FHDDVIAKGFHL--DQVSYGTLINGLC 180

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G    A ++   +    +  NV  Y T+ID   +      A  LC EM+ + + P+ V
Sbjct: 181 KTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVV 240

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL---- 416
            Y + I+     G ++ A+ + + M+ K+I PD +T++IL  GLC+ G +K+A  +    
Sbjct: 241 TYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVM 300

Query: 417 -------------------------------HNQVLEEHMVGDAYSYNILINYLCKSNNL 445
                                           N +    +  D  SY+I+IN LCK+  +
Sbjct: 301 IKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMV 360

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   M  + + P+ +TY +LIDG  K G I  A  +   M    +  +++ Y+S+
Sbjct: 361 DEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSL 420

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ++ LCK+  +D A +L+   +  G+   I TY  L++G   NG++ +A A++ ++   G 
Sbjct: 421 LDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGY 480

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            ++   YN+++N LCK G + +A  L+  M  +G IPD VTY TLV    +N   ++ ++
Sbjct: 481 HLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVK 540

Query: 625 LHDDMVLSG 633
           L  +M++ G
Sbjct: 541 LLREMIVQG 549



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 216/417 (51%), Gaps = 10/417 (2%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG  +   ++   ++ L K  E     ++ +++       NV  +N +I +LCK+  +  
Sbjct: 163 KGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIH 222

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L   M+   I+P+VV +  +I     VG L+ A+ LF +M +    ++ P+  T N 
Sbjct: 223 ASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL---KNIKPDVYTFNI 279

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +++G CK G ++ A  +   MIK G+D N+ TY +L+DGY       +A  + + M +RG
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P+   Y+  I+ L     V+ A+ +  +M  K + P+  TY+ L  GL + G +  A+
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L N++       D  +Y+ L++ LCK++ +  A  L++ +  +G+ P+I TY  L+DG 
Sbjct: 400 DLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           CK G ++ A  VY+++       ++ +YN ++NGLCK+   D A SL+   +  G + DA
Sbjct: 460 CKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDA 519

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           +TY TL+   F N K  +A  +  EM   G A   VG NI  N +    C  QA  L
Sbjct: 520 VTYETLVRALFENDKNDKAVKLLREMIVQGSA---VGSNISSNSML---CVYQAAPL 570



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 144/273 (52%), Gaps = 3/273 (1%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD FT++IL    C  G +  AF +  ++ +     D  +   LI  LC +  +  
Sbjct: 93  KQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVRE 152

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A      +I +G   D ++YGTLI+G CK G    A+QV   +  +  +PN+V+YN+II+
Sbjct: 153 ALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIID 212

Query: 508 GLCKDASLDAAKSLLQAS--QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            LCKD  +  A  L      +RI   D +TY TLI G  I G++ EA  +F++M    I 
Sbjct: 213 SLCKDKLVIHASDLCSEMIVKRI-FPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK 271

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   +NIL++ LCK G  ++AR ++ VMI  G+  + VTY +L+  +       +   +
Sbjct: 272 PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFV 331

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            + M   GV+PD Q+Y+ +I+ L   K  ++ V
Sbjct: 332 FNTMARRGVTPDVQSYSIMINGLCKTKMVDEAV 364



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 36/231 (15%)

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
           +R  +  I  +  ++    K  +   A+   + M+  + +P+L  +N +IN  C    L+
Sbjct: 57  MRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLN 116

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A S+L    ++G   D +T  TLI G  +NGK+ EA     ++   G  +++V Y  LI
Sbjct: 117 FAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLI 176

Query: 576 NFLCKFGCYQQARELMKV-----------------------------------MILHGII 600
           N LCK G  + A ++++                                    MI+  I 
Sbjct: 177 NGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIF 236

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           PD VTYTTL+         +E + L + M+L  + PD  T+N ++  L  E
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKE 287


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 226/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   + F +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L +L+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV  
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSX 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR   VM    V P+  T++ +ING CK  +++ A E    
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A  +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ DM  K + PD  TY+ L  G C+ G +  AF+   ++++E++  D   Y  
Sbjct: 298 LKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+   L PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HAPSVVTYNVLMNG 431



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +  TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A     +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLIB
Sbjct: 266 AKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIB 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G+++ A +  + M +   + + V+Y ++I+GLC++  S+DA K L +        
Sbjct: 326 GCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G A + V YN+L+N
Sbjct: 386 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 156/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   + + L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +    M+V+GL+P+ +T+
Sbjct: 191 GDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A ++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLIBG    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+   + PD  TYT ++  F K     +  +L  +M   G +P   TYN +++
Sbjct: 371 AEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++  TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A          GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 7/258 (2%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ YL K           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V  N+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRL 190

Query: 513 ASLDAA---KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
             LD     KS++ AS   G+  D  TY+ LING     K+ +A   F EM   G+  N 
Sbjct: 191 GDLDEGFRLKSVMLAS---GVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNG 247

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V +  LI+  CK G    A+E+ K M+   ++PD +TY TL+    K    ++  +L DD
Sbjct: 248 VTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD 307

Query: 629 MVLSGVSPDNQTYNAIIS 646
           M + G+ PD  TY  +I 
Sbjct: 308 MSMKGLKPDKITYTTLIB 325


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 262/528 (49%), Gaps = 58/528 (10%)

Query: 147 AVFDALVRACT-QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           ++FD +VR C+ ++      Y ++                  +    ++  +   + ++ 
Sbjct: 178 SLFDRMVRECSDKVAPDRCTYSIL------------------IGCFCRMGRLEHGFAVFG 219

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALS-LYYRMLKSGIWPNVVCFNMIINEACQV 264
            ++  G+  N   FN ++  LC   +L+EA + L +RM + G  PNVV +N ++   C  
Sbjct: 220 LILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNE 279

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
              E AL+L   M    G S  P+ V++N +INGF + G+V+ A  +   MI  GI  +V
Sbjct: 280 NRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDV 339

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY T+IDG  +    + A  +  +M+ +G+ P+N  YN  IH   + G  +  + +L +
Sbjct: 340 VTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEE 399

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M    + PD F Y++L   LC+NG   +A  + + V+ + +  DA    ++   +C    
Sbjct: 400 MSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDA----MIDEAVC---- 451

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV--------QVY-----ENMK 491
                 +   M  +GL P+++ YG LID  CK G ++ A+        +VY     E  +
Sbjct: 452 ------IFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWE 505

Query: 492 KVEK----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
           K E+          + ++V++N+++  LC++  +  A+ L++   R+G+  D I+YNTL+
Sbjct: 506 KAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLV 565

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G+ + G+  EA  +   M ++G+  N+  YN L++  CK      A  L++ M+++G  
Sbjct: 566 DGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPT 625

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           PD VTY T++    +     E  EL+ +M+ S    D  TYN I++ L
Sbjct: 626 PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGL 673



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 233/491 (47%), Gaps = 41/491 (8%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           ++N  ++   +  ++ + + L+ +M+  G   +V T+N VI  LCK   ++ A +++ +M
Sbjct: 306 SYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQM 365

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           L  G+ P+   +N +I+     G  +  ++L  +M   S   + P+   +  +++  CK 
Sbjct: 366 LDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEM---STHDLEPDCFIYALLLDYLCKN 422

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GR   A  I  ++I+ GI  +      +ID         EA+ + D+M ++GL PN V Y
Sbjct: 423 GRCTEARNIFDSVIRKGIKPD-----AMID---------EAVCIFDKMRQQGLSPNVVNY 468

Query: 363 NSTIHWLFAEGDVEGALFVLSDMI-----------------------DKHICPDHFTYSI 399
            + I  L   G V+ A+   + MI                       D+ I  D   ++ 
Sbjct: 469 GALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNT 528

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L   LCR G V +A +L   +L   +  D  SYN L++  C +     A +LL  M+  G
Sbjct: 529 LMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG 588

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L P+  TY TL+ GYCK   I+ A  +   M      P++V YN+I++GL +      AK
Sbjct: 589 LKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAK 648

Query: 520 SL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L L         D  TYN ++NG   N  + EAF MF  + + G+ ++ + +NI+I  L
Sbjct: 649 ELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGAL 708

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G  + A +L   +  +G++PD  TY  +     K  S EE+  L   M  +G +P++
Sbjct: 709 LKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNS 768

Query: 639 QTYNAIISPLL 649
           +  NA++   L
Sbjct: 769 RMLNALVRRFL 779



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 248/550 (45%), Gaps = 60/550 (10%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDS------YEI 141
           NR   +LE    ++H++ +    D  L    +++S N+V    F EG +D         I
Sbjct: 280 NRAEEALE----LLHVMAD----DQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMI 331

Query: 142 CKATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
            +  P     ++ ++    +    + A  V Q++  KG   S   +N  +   +   +  
Sbjct: 332 DRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWK 391

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCK---------------------ECKLEEALS 237
              +L +EM +     +   + L++  LCK                     +  ++EA+ 
Sbjct: 392 EVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVC 451

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-----GV------------- 279
           ++ +M + G+ PNVV +  +I+  C++G ++ A+  F +M     G+             
Sbjct: 452 IFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELV 511

Query: 280 --MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    +  + V  N ++   C+ GRV  A+ +   M++ G+  +V +Y TL+DG+   
Sbjct: 512 FEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLT 571

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G ++EA +L D MV  GL PN   YN+ +H       ++ A  +L +M+     PD  TY
Sbjct: 572 GRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTY 631

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + +  GL + G   +A +L+  ++      D Y+YNI++N LCK+N +  A ++  S+  
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           +GL   IIT+  +I    KGG  E A+ ++  +      P++  Y  I   L K+ SL+ 
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
              L  A +  G   ++   N L+  +   G I+ A A  S++     ++     ++LI+
Sbjct: 752 LGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLIS 811

Query: 577 FLCKFGCYQQ 586
              + G YQQ
Sbjct: 812 LYSR-GEYQQ 820



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 22/327 (6%)

Query: 340 SEEALRLCDEMVKR---GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
           S+  + L D MV+     + P+   Y+  I      G +E    V   ++      +H  
Sbjct: 173 SQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIV 232

Query: 397 YSILTKGLCRNGCVKQAFK-LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           ++ L KGLC    + +A   L  ++ E     +  SYN L+   C  N    A +LL  M
Sbjct: 233 FNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVM 292

Query: 456 IV-RGL--IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
              +GL   PD+++Y T+I+G+ + G ++ A  ++  M      P++V YN++I+GLCK 
Sbjct: 293 ADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKA 352

Query: 513 ASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +D AK++ Q     G+  +  TYN LI+GY   GK  E   +  EM    +  +   Y
Sbjct: 353 QVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIY 412

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
            +L+++LCK G   +AR +   +I  GI PD +               +E + + D M  
Sbjct: 413 ALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMI--------------DEAVCIFDKMRQ 458

Query: 632 SGVSPDNQTYNAIISPLLGEKSAEDQV 658
            G+SP+   Y A+I  L      +D +
Sbjct: 459 QGLSPNVVNYGALIDALCKLGRVDDAI 485



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 157/361 (43%), Gaps = 13/361 (3%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEIC--------KATPAVFD 150
           A++  L    R DDA+L    ++  N V  L  +E    + E+         +    VF+
Sbjct: 470 ALIDALCKLGRVDDAILKFNQMI--NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFN 527

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
            L+    + G    A  +I+ +   G    + ++N  +             KL   MVS 
Sbjct: 528 TLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSI 587

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   N  T+N +++  CK  ++++A SL   ML +G  P+VV +N I++   Q G    A
Sbjct: 588 GLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEA 647

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            +L+  M          +  T+N I+NG CK   V+ A ++  ++   G+  ++ T+  +
Sbjct: 648 KELYLNM---INSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIM 704

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I    +GG  E+A+ L   +   GL+P+   Y      L  EG +E    + S M +   
Sbjct: 705 IGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGT 764

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+    + L +     G + +A    +++ E++   +A + ++LI+   +      AK 
Sbjct: 765 APNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKS 824

Query: 451 L 451
           L
Sbjct: 825 L 825


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 227/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAT 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   V   L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  ILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL      FR    M    V P+  T++ +ING CK  +++ A E+   
Sbjct: 181 NTLMNGYIRLGDLNEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD FTY  L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 157/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G   E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  L K  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 266 AMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GLIP+ +T+
Sbjct: 191 GDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GL K   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G++    ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 184 MNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  L K G  +QA +
Sbjct: 244 IPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHD 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TY TL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/651 (24%), Positives = 295/651 (45%), Gaps = 122/651 (18%)

Query: 111 DDALLLMGNLM-SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE-GAYDV 168
           DDA  L   L+   ++ +P   L  LL +  + +A P+       AC  + A     +  
Sbjct: 125 DDARHLFDELLLRRDAPAPARGLNELLSA--LARAPPSA------ACRDVPALAVELFKR 176

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + +      + +I+ +N  ++   +         ++  ++  G   +V ++N +I    K
Sbjct: 177 MDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSK 236

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E ++++A  L+Y+M + GI PNVV ++ +IN  C+  +++ A ++ R+M    G  V PN
Sbjct: 237 EGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM---VGAGVRPN 293

Query: 289 SVTHNCIINGF-----------------------------------CKLGRVEFAEEIRY 313
           ++T+NC+I+G+                                   CK GR++ A +I  
Sbjct: 294 NMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFD 353

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
           +M+  G   +V +Y  L+ GYA  G       L + MV  G++P+  V+N+ I+     G
Sbjct: 354 SMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG 413

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ +L +  DM  + + PD  T+S +    CR G +  A +  N +++  +  D   Y+
Sbjct: 414 MMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 473

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIP------------------------------- 462
            LI   C   +L  AK+L+S M+ +G+ P                               
Sbjct: 474 CLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH 533

Query: 463 -----DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
                ++IT+ +L+DGYC  GN++ AV + ++M+ V  +P++  YN++++G CK   +D 
Sbjct: 534 TGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 593

Query: 518 AKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV--------- 566
           A +L +    +R+  L +++YN +++G F   +   A  MF EM   G+AV         
Sbjct: 594 ALTLFRDMLHKRV-TLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVL 652

Query: 567 --------------------------NKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
                                     + + +NI+I  + K G  Q+A+EL   +  +G++
Sbjct: 653 GGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLV 712

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           P  +TY  ++T   K  S E+   L   M  S  +PD++  N II  LL +
Sbjct: 713 PTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 763



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 226/478 (47%), Gaps = 5/478 (1%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           ++ + A  + G  + A D+   + +KG    + ++   L        I     L+  MV 
Sbjct: 333 NSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC 392

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V + + FN +I A  +   ++++L ++  M K G+ P+++ F+ +I+  C++G L+ 
Sbjct: 393 EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD 452

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN-VRTYA 328
           A++ F  M + +G  V P++  ++C+I G C    +  A+E+   M+  GI    ++ + 
Sbjct: 453 AMEKFNHM-IDTG--VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 509

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           ++I+   + G   E   + D ++  G  PN + +NS +      G+++ A+ +L  M   
Sbjct: 510 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 569

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD +TY+ L  G C++G +  A  L   +L + +   + SYNI+++ L ++     A
Sbjct: 570 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 629

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K++   MI  G+   I TY T++ G C+    + A  + E +  +  K +++ +N +I  
Sbjct: 630 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 689

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           + K      AK L  A    GL+  I TY  +I          +A  +FS M       +
Sbjct: 690 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 749

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
               N +I  L   G   +A   +  +   GI+P+  T + L+  FS N    E I+L
Sbjct: 750 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 807



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 224/499 (44%), Gaps = 45/499 (9%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALV 153
           SS  +V  + N   F  AL   G +  A  +          DS  +    P V  + AL+
Sbjct: 321 SSSLLVPDVGNCNSFMTALCKHGRIKEARDI---------FDSMVLKGPKPDVISYGALL 371

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                 G   G  ++   +  +G     H +N  ++   +L  + +   ++++M   G  
Sbjct: 372 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN 431

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            ++ TF+ VI A C+  +L++A+  +  M+ +G+ P+   ++ +I   C   DL  A +L
Sbjct: 432 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKEL 491

Query: 274 FRKM------------------------GVMSGDSVL---------PNSVTHNCIINGFC 300
              M                         V  G  V+         PN +T N +++G+C
Sbjct: 492 ISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYC 551

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
            +G ++ A  +  +M   G++ ++ TY TL+DGY + G  ++AL L  +M+ + +   +V
Sbjct: 552 LVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSV 611

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN  +H LF       A  +  +MI+  +     TY+ +  GLCRN C  +A  L  ++
Sbjct: 612 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
              ++  D  ++NI+I  + K      AK+L +++   GL+P I+TY  +I    K  + 
Sbjct: 672 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 731

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           E A  ++ +M+K    P+  I N II  L     +  A + L    + G+L +A T + L
Sbjct: 732 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 791

Query: 540 INGYFINGKIAEAFAMFSE 558
           I  + +NGK  E   +  E
Sbjct: 792 IYLFSVNGKYREYIKLLPE 810



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 12/91 (13%)

Query: 571 YNILINFLCKFGCYQQARE------LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           YNILIN      CY++AR       +   ++  G+ PD  +Y  L+  FSK    ++  +
Sbjct: 192 YNILIN------CYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L   M   G+ P+  TY+++I+ L   K  +
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMD 276


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 241/462 (52%), Gaps = 9/462 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--IWPNVVCFNMIINE 260
           L   M   G V N  ++N VI +LC + + +EAL +  RM K G    P+VV FN +I+ 
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G++  A  L  +M V  G  V P+ VT+N I++  CK   ++ AE +   M+  G+
Sbjct: 274 FFKQGEVSKACNLINEM-VQKG--VEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + +  TY  +I GY+  G  +E+ ++  +M  +GL+P  V +NS +  L   G  + A  
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +   M  K   PD  +YSIL  G    G       L + + ++ +V + + +NILI+   
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHA 450

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A  + + M  +G+ PD++TY TLI  +C+ G +  A++ +  M  +  +PN V
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV 510

Query: 501 IYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           +Y+S+I+G C    L  AK L+    S+ I   + + ++++I+     G++ +A  +F+ 
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNL 570

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           + ++G     V +N LI+  C  G  ++A  ++  M+  GI PD VTY TLV+ + K+  
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK 630

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
            ++ + L  +M+   V P   TY+ ++  L   G  SA  ++
Sbjct: 631 IDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 256/519 (49%), Gaps = 7/519 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH--SVSIHAWNNFLSHLVKLNEIGR 199
           C      ++ ++++      ++ A D++Q++  +G   S  + ++N  +    K  E+ +
Sbjct: 223 CVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSK 282

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L  EMV  G   +V T+N ++ ALCK   +++A  +  +M+  G+ P+ + +  II+
Sbjct: 283 ACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIH 342

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
                G  + + K+FRKM   +   ++P  VT N  ++  CK GR + AEEI   M   G
Sbjct: 343 GYSCSGHWKESAKMFRKM---TSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKG 399

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              ++ +Y+ L+ GYA  G   +   L   M  +G++ N   +N  I      G ++ A+
Sbjct: 400 HMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAM 459

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V ++M  + + PD  TYS L    CR G +  A +  +Q++   +  +   Y+ LI+  
Sbjct: 460 LVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGF 519

Query: 440 CKSNNLAAAKQLLSSMIVRGLI-PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           C   +L  AK+L+S M+ +G+  P+I+ + ++I   C  G +  A  V+  +  +  +P 
Sbjct: 520 CMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPT 579

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           +V +NS+I+G C    ++ A  +L A   +G+  D +TYNTL++GY  +GKI +   +F 
Sbjct: 580 IVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFR 639

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM +  +    V Y+I+++ L   G    A+++   MI  G   D  TY  L+    +N 
Sbjct: 640 EMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 699

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +E I L   +       D    N +I+ L   +  E+
Sbjct: 700 LTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREE 738



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 230/480 (47%), Gaps = 5/480 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++ + +  + G ++ A ++ Q +  KGH   + +++  L              L+  M
Sbjct: 371 TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G V N + FN++I A  K   ++EA+ ++  M   G+ P+VV ++ +I+  C++G L
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID-CNVRT 326
             A++ F +M  +    + PN+V ++ +I+GFC  G +  A+E+   M+  GI   N+  
Sbjct: 491 ADAMEKFSQMISI---GLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVF 547

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           ++++I      G   +A  + + ++  G  P  V +NS I      G +E A  VL  M+
Sbjct: 548 FSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 607

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I PD  TY+ L  G C++G +     L  ++L + +     +Y+I+++ L  +   +
Sbjct: 608 SVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTS 667

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           AAK++   MI  G   DI TY  L+ G C+    + A+ ++  +  ++ K ++ I N++I
Sbjct: 668 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVI 727

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           N L K    + A  L  A    GL+  + TY  +I+     G + EA  MFS M   G A
Sbjct: 728 NALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCA 787

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +    N +I  L + G   +A   M  +    I  +  T + L++ FS      E I+ 
Sbjct: 788 PSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 847



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/522 (22%), Positives = 236/522 (45%), Gaps = 55/522 (10%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE-----------IGR 199
           A VRA T   +T+ A+ +  +L  +G  V   A N FL+ L +  +           +  
Sbjct: 81  ARVRAGTF--STDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPALVLAL 138

Query: 200 FWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           F ++ +E         +V+T+ +++   C+  + +   + + R+L++G+    +  N  +
Sbjct: 139 FNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFL 198

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              C     + A+ +   +  MS    +PN++++N +I   C   R              
Sbjct: 199 KCLCHAKRTDEAVDVL--LHRMSDLGCVPNAISYNTVIKSLCGDSR-------------- 242

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVE 376
                                S+EAL +   M K G    P+ V +N+ IH  F +G+V 
Sbjct: 243 ---------------------SQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 281

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  ++++M+ K + PD  TY+ +   LC+   + +A  +  Q++++ +  D  +Y  +I
Sbjct: 282 KACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAII 341

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +    S +   + ++   M  +GLIP I+T+ + +   CK G  + A ++++ M      
Sbjct: 342 HGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHM 401

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAM 555
           P+LV Y+ +++G   +       +L  +    G++ +   +N LI+ +   G + EA  +
Sbjct: 402 PDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLV 461

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F+EM+  G+  + V Y+ LI+  C+ G    A E    MI  G+ P+ V Y +L+  F  
Sbjct: 462 FTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCM 521

Query: 616 NCSPEEVIELHDDMVLSGVS-PDNQTYNAIISPLLGEKSAED 656
           +    +  EL  +M+  G+  P+   +++II  L  E    D
Sbjct: 522 HGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMD 563



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 59/135 (43%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K T   +  ++      G T  A  +  ++   G +V I  +   L  L + +       
Sbjct: 647 KPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 706

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ ++ +     ++   N VI AL K  + EEA  L+  +  SG+ PNV  + ++I+   
Sbjct: 707 LFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLL 766

Query: 263 QVGDLEFALKLFRKM 277
           + G +E A  +F  M
Sbjct: 767 KEGSVEEADTMFSSM 781


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 262/510 (51%), Gaps = 5/510 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ L+   ++ G  + AY++  K+  +  S  +  +N+ +  L K  E+ +  ++ ++MV
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   N  T+N +IY        +E++ ++  M  SG+ P VV  N  I+  C+   ++
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +F  M V+ G    PN ++++ +++G+   G       +   M+  GI  N R + 
Sbjct: 280 EAKDIFDSM-VLKGPK--PNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFN 336

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LI+ YAR G  ++A+ + ++M  +G++P+ V + + I  L   G ++ AL   + M+D 
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 396

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAA 447
            + P    Y  L +G C +G + +A +L ++++ + +      Y + +IN L K   +A 
Sbjct: 397 GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE 456

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            K ++  M+  G  P+++T+ +L++GYC  GN+E A  + + M  +  +PN  IY ++++
Sbjct: 457 GKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 516

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G CK+  +D A ++ +     G+   ++ YN +++G F   +   A  MF EM   G  V
Sbjct: 517 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTV 576

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y +++  LC+  C  +A  L++ +    +  D +T+  +++   K    +E  EL 
Sbjct: 577 SIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELF 636

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +   G+ P   TYN +IS L+ E+S E+
Sbjct: 637 AAISTYGLVPTVHTYNLMISNLIKEESYEE 666



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 224/440 (50%), Gaps = 5/440 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
            + T+N++I    +  + E AL+++ R+L++G+ P+V  +N +I+   + G+++ A +LF
Sbjct: 121 TIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELF 180

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            KM      SV P+ VT+N +I+G CK   +  +E +   M+ AGI  N +TY +LI GY
Sbjct: 181 YKM---IEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           +  G  +E++R+  EM   GL+P  V  NS IH L     ++ A  +   M+ K   P+ 
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNI 297

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            +YS L  G    GC      L N ++ + +V +   +NILIN   +   +  A  +   
Sbjct: 298 ISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFED 357

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  +G+IPD +T+ T+I   C+ G ++ A+  + +M  +   P+  +Y  +I G C    
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           L  AK L+    ++ I       ++++IN  F  G++AE   +   M   G   N V +N
Sbjct: 418 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 477

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L+   C  G  ++A  L+  M   GI P+   Y TLV  + KN   ++ + +  DM+  
Sbjct: 478 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 537

Query: 633 GVSPDNQTYNAIISPLLGEK 652
           GV P +  YN I+  L   +
Sbjct: 538 GVKPTSVLYNIILHGLFQAR 557



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 198/390 (50%), Gaps = 6/390 (1%)

Query: 261 ACQVGDLEFALKLFRKM---GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           AC  G    A++LF++M         +  P   T+N +I+ + ++ R E A  +   +++
Sbjct: 92  ACSDGP-ALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLR 150

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+  +V +Y TLIDG+++ G  ++A  L  +M+++ + P+ V YNS I  L    ++  
Sbjct: 151 TGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVK 210

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           +  VL  M+D  I P++ TY+ L  G    G  K++ ++  ++    ++    + N  I+
Sbjct: 211 SERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIH 270

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+ N +  AK +  SM+++G  P+II+Y TL+ GY   G       +   M      P
Sbjct: 271 ALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVP 330

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           N   +N +IN   +   +D A  + +  Q  G++ D +T+ T+I+     G++ +A   F
Sbjct: 331 NHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 390

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY-TTLVTRFSK 615
           + M ++G+  ++  Y  LI   C  G   +A+EL+  M+   I P  V Y ++++    K
Sbjct: 391 NHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFK 450

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                E  ++ D MV +G  P+  T+N+++
Sbjct: 451 EGRVAEGKDIMDLMVQTGQRPNVVTFNSLM 480



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 190/405 (46%), Gaps = 5/405 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+ A  + G  + A  + + ++ KG       +   +S L ++  +      +  MV
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVGDL 267
             G   +   +  +I   C   +L +A  L   M+   I P  V  F+ IIN   + G +
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRV 454

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                +   M +M      PN VT N ++ G+C +G +E A  +  AM   GI+ N   Y
Sbjct: 455 AEGKDI---MDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL+DGY + G  ++AL +  +M+ +G+ P +V+YN  +H LF       A  +  +MI+
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                   TY ++  GLCRN C  +A  L  ++   ++  D  ++NI+I+ + K      
Sbjct: 572 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQE 631

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK+L +++   GL+P + TY  +I    K  + E A  ++ +++K  + P+  + N I+ 
Sbjct: 632 AKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVR 691

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
            L K A +  A + L       L L+A T + L + +   GK  E
Sbjct: 692 MLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCRE 736



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/370 (22%), Positives = 149/370 (40%), Gaps = 53/370 (14%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLE-----FLEGLLDSYEICKA--------- 144
            ++  L    R DDAL    N M    V P E      ++G  +  E+ KA         
Sbjct: 372 TVISSLCRIGRLDDALHKF-NHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMN 430

Query: 145 ----TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
                P V  F +++    + G      D++  +   G   ++  +N+ +     +  + 
Sbjct: 431 KDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNME 490

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             + L   M S G   N   +  ++   CK  ++++AL+++  ML  G+ P  V +N+I+
Sbjct: 491 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550

Query: 259 NEACQVGDLEFALKLFRKM------------GVMSGD--------------------SVL 286
           +   Q      A K+F +M            GV+ G                     +V 
Sbjct: 551 HGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 610

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
            + +T N +I+   K+GR + A+E+  A+   G+   V TY  +I    +  S EEA  L
Sbjct: 611 FDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNL 670

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              + K G  P++ + N  +  L  + +V  A   LS + + ++  +  T S+L     R
Sbjct: 671 FISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSR 730

Query: 407 NGCVKQAFKL 416
            G  ++  KL
Sbjct: 731 EGKCREHIKL 740


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/651 (24%), Positives = 295/651 (45%), Gaps = 122/651 (18%)

Query: 111 DDALLLMGNLM-SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATE-GAYDV 168
           DDA  L   L+   ++ +P   L  LL +  + +A P+       AC  + A     +  
Sbjct: 54  DDARHLFDELLLRRDAPAPARGLNELLSA--LARAPPSA------ACRDVPALAVELFKR 105

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + +      + +I+ +N  ++   +         ++  ++  G   +V ++N +I    K
Sbjct: 106 MDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSK 165

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E ++++A  L+Y+M + GI PNVV ++ +IN  C+  +++ A ++ R+M    G  V PN
Sbjct: 166 EGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM---VGAGVRPN 222

Query: 289 SVTHNCIINGF-----------------------------------CKLGRVEFAEEIRY 313
           ++T+NC+I+G+                                   CK GR++ A +I  
Sbjct: 223 NMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFD 282

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
           +M+  G   +V +Y  L+ GYA  G       L + MV  G++P+  V+N+ I+     G
Sbjct: 283 SMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLG 342

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ +L +  DM  + + PD  T+S +    CR G +  A +  N +++  +  D   Y+
Sbjct: 343 MMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYS 402

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIP------------------------------- 462
            LI   C   +L  AK+L+S M+ +G+ P                               
Sbjct: 403 CLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIH 462

Query: 463 -----DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
                ++IT+ +L+DGYC  GN++ AV + ++M+ V  +P++  YN++++G CK   +D 
Sbjct: 463 TGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDD 522

Query: 518 AKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV--------- 566
           A +L +    +R+  L +++YN +++G F   +   A  MF EM   G+AV         
Sbjct: 523 ALTLFRDMLHKRV-TLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVL 581

Query: 567 --------------------------NKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
                                     + + +NI+I  + K G  Q+A+EL   +  +G++
Sbjct: 582 GGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLV 641

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           P  +TY  ++T   K  S E+   L   M  S  +PD++  N II  LL +
Sbjct: 642 PTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 692



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 226/478 (47%), Gaps = 5/478 (1%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           ++ + A  + G  + A D+   + +KG    + ++   L        I     L+  MV 
Sbjct: 262 NSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC 321

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V + + FN +I A  +   ++++L ++  M K G+ P+++ F+ +I+  C++G L+ 
Sbjct: 322 EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD 381

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN-VRTYA 328
           A++ F  M + +G  V P++  ++C+I G C    +  A+E+   M+  GI    ++ + 
Sbjct: 382 AMEKFNHM-IDTG--VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFT 438

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           ++I+   + G   E   + D ++  G  PN + +NS +      G+++ A+ +L  M   
Sbjct: 439 SIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESV 498

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD +TY+ L  G C++G +  A  L   +L + +   + SYNI+++ L ++     A
Sbjct: 499 GVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVA 558

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           K++   MI  G+   I TY T++ G C+    + A  + E +  +  K +++ +N +I  
Sbjct: 559 KEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRA 618

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           + K      AK L  A    GL+  I TY  +I          +A  +FS M       +
Sbjct: 619 MFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPD 678

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
               N +I  L   G   +A   +  +   GI+P+  T + L+  FS N    E I+L
Sbjct: 679 SRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKL 736



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 224/499 (44%), Gaps = 45/499 (9%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALV 153
           SS  +V  + N   F  AL   G +  A  +          DS  +    P V  + AL+
Sbjct: 250 SSSLLVPDVGNCNSFMTALCKHGRIKEARDI---------FDSMVLKGPKPDVISYGALL 300

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                 G   G  ++   +  +G     H +N  ++   +L  + +   ++++M   G  
Sbjct: 301 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN 360

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            ++ TF+ VI A C+  +L++A+  +  M+ +G+ P+   ++ +I   C   DL  A +L
Sbjct: 361 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKEL 420

Query: 274 FRKM------------------------GVMSGDSVL---------PNSVTHNCIINGFC 300
              M                         V  G  V+         PN +T N +++G+C
Sbjct: 421 ISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYC 480

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
            +G ++ A  +  +M   G++ ++ TY TL+DGY + G  ++AL L  +M+ + +   +V
Sbjct: 481 LVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSV 540

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN  +H LF       A  +  +MI+  +     TY+ +  GLCRN C  +A  L  ++
Sbjct: 541 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
              ++  D  ++NI+I  + K      AK+L +++   GL+P I+TY  +I    K  + 
Sbjct: 601 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 660

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           E A  ++ +M+K    P+  I N II  L     +  A + L    + G+L +A T + L
Sbjct: 661 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 720

Query: 540 INGYFINGKIAEAFAMFSE 558
           I  + +NGK  E   +  E
Sbjct: 721 IYLFSVNGKYREYIKLLPE 739



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 12/91 (13%)

Query: 571 YNILINFLCKFGCYQQARE------LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           YNILIN      CY++AR       +   ++  G+ PD  +Y  L+  FSK    ++  +
Sbjct: 121 YNILIN------CYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L   M   G+ P+  TY+++I+ L   K  +
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMD 205


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 231/453 (50%), Gaps = 10/453 (2%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSL-YYRMLKSGIWPNVVCFNMIINEACQVG 265
           +V  G+  +  TF  ++  LC + +  +A+ +   RM + G  P+V  +N ++   C   
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDEN 177

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG--------RVEFAEEIRYAMIK 317
             + AL+L   M    G    P+ V++N ++NGF K G         ++ A E+   M+K
Sbjct: 178 RSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVK 237

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+  +  TY +++ GY   G  +EA+    +M   G+ PN V Y+S +++L   G    
Sbjct: 238 NGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTE 297

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +   M  + + PD  TY  L +G C+ G V ++ KL + ++   +  D  +YN LI+
Sbjct: 298 ARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 357

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             C +  +  A +LL+SM+  G+ PDI+TYGTLI+GYC+   ++ A+ +++ M      P
Sbjct: 358 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 417

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           N++ YN I+ GL       AAK L  +  + G  L+  TYN +++G   N    EA  MF
Sbjct: 418 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 477

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             +    + +    +NI+I  L K G   +A++L      +G++PD  TY+ +     + 
Sbjct: 478 QNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQ 537

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            S EE+ +L   M  +G S D++  N+I+  LL
Sbjct: 538 GSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 570



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 220/431 (51%), Gaps = 19/431 (4%)

Query: 235 ALSLYYRMLKSG---IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           A+S Y RM ++G   + P V  + ++I   C+ G L+     F  +G +       +++T
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLG---FAALGNVVKKGFRVDAIT 129

Query: 292 HNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
              ++ G C   R   A +I    M + G   +V +Y  L+ G      S+EAL L   M
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189

Query: 351 VKR---GLMPNNVVYNSTIHWLFAEG--------DVEGALFVLSDMIDKHICPDHFTYSI 399
                 G  P+ V YN+ ++  F EG         ++ A+ VL+ M+   + PD  TY+ 
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNS 249

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +  G C +G  K+A     ++  + +  +  +Y+ L+NYLCK+     A+++  SM  RG
Sbjct: 250 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L PDI TY TL+ G+CK G +  + ++++ M ++  KP+++ YN++I+G C    +D A 
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 369

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL +   +G+  D +TY TLINGY    ++ +A A+F EM + G++ N + YNI++  L
Sbjct: 370 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
                   A+EL   +   G   +  TY  ++    KN   +E + +  ++ L+ +  + 
Sbjct: 430 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 489

Query: 639 QTYNAIISPLL 649
           +T+N +I  LL
Sbjct: 490 RTFNIMIGALL 500



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 246/544 (45%), Gaps = 42/544 (7%)

Query: 63  VNRVVSEF-RKSPKLALEFYTWVGENN--RFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           +NR +++  R SP  A+  Y  +      + + ++ +   ++       R D     +GN
Sbjct: 58  LNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGN 117

Query: 120 LMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           ++      ++++    L+GL       K T    D ++R  T++G     +         
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCAD----KRTSDAMDIVLRRMTELGCIPDVF--------- 164

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS---CGYVENVNTFNLVIYALCKEC-- 230
                  ++NN L  L   N      +L   M      G   +V ++N V+    KE   
Sbjct: 165 -------SYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQ 217

Query: 231 ------KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
                  +++A+ +   M+K+G+ P+ + +N I++  C  G  + A+   +KM     D 
Sbjct: 218 TKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM---RSDG 274

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V PN VT++ ++N  CK GR   A +I  +M K G++ ++ TY TL+ G+ + G   E+ 
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESE 334

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L D MV+ G+ P+ + YN+ I      G ++ A  +L+ M+   + PD  TY  L  G 
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 394

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           CR   +  A  L  +++   +  +  +YNI++  L  +   AAAK+L  S+   G   ++
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 454

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY  ++ G CK    + A+++++N+   + +     +N +I  L K   +D AK L  A
Sbjct: 455 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 514

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               GL+ D  TY+ +       G + E   +F  M   G + +    N ++  L + G 
Sbjct: 515 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGD 574

Query: 584 YQQA 587
             +A
Sbjct: 575 ITRA 578



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 174/362 (48%), Gaps = 3/362 (0%)

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
           A + A +V+  +   G       +N+ L       +        K+M S G   NV T++
Sbjct: 224 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 283

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            ++  LCK  +  EA  ++  M K G+ P++  +  ++   C+ G +  + KLF    +M
Sbjct: 284 SLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF---DLM 340

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
               V P+ +T+N +I+G C  G+++ A ++  +M+  G+  ++ TY TLI+GY R    
Sbjct: 341 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 400

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           ++AL L  EMV  G+ PN + YN  +  LF       A  +   +       +  TY+I+
Sbjct: 401 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 460

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GLC+N    +A ++   +    +  +  ++NI+I  L K   +  AK L ++    GL
Sbjct: 461 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 520

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +PD+ TY  + +   + G++E    ++ +M++     +  + NSI+  L +   +  A +
Sbjct: 521 VPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGT 580

Query: 521 LL 522
            L
Sbjct: 581 YL 582



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 3/253 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+  C   G  + A  ++  +   G    I  +   ++   +++ +     L+KEM
Sbjct: 351 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 410

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           VS G   N+ T+N+++  L    +   A  LY  + KSG    +  +N+I++  C+    
Sbjct: 411 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 470

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + AL++F+ + +     +   + T N +I    K GR++ A+++  A    G+  +VRTY
Sbjct: 471 DEALRMFQNLCLTD---LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 527

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + + +     GS EE   L   M + G   ++ + NS +  L   GD+  A   L  + +
Sbjct: 528 SLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 587

Query: 388 KHICPDHFTYSIL 400
           KH   +  T S L
Sbjct: 588 KHFSLEASTASFL 600


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 225/428 (52%), Gaps = 5/428 (1%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           KL+EA+++   M   G+       N +I+ A  +G +++A K+F +M      +V+P+S 
Sbjct: 173 KLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEM---LDRAVVPDST 229

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           ++  ++ G+C++GR+   +     MI+ G   +  T   +I  ++  G    A     + 
Sbjct: 230 SYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKW 289

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ GL PN + ++S I+ L   G ++ A  +L +M+ K   P+ +T++ L  GLC+ G  
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWT 349

Query: 411 KQAFKLHNQ-VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++AF+L  + V  ++   + Y+Y  +IN  CK   L  A+ LL  M  +GL+P+  TY  
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTC 409

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+CK GN   A ++ + M K    PN+  YN+II+GLCK      A  LL+   + G
Sbjct: 410 LIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSG 469

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D +TY  LI+ +       +A A+FS M  VG+  +   YN+LI   C+    +++ 
Sbjct: 470 LHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESE 529

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L +  +  G++P   TYT+++  + ++      I+    M   G  PD+ TY A+IS L
Sbjct: 530 KLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGL 589

Query: 649 LGEKSAED 656
             E   ++
Sbjct: 590 CNESKLDE 597



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 234/471 (49%), Gaps = 5/471 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V   +VR+ ++IG  + A +++ +++  G  +     N  +   + L  +    K++ EM
Sbjct: 160 VMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEM 219

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +    V +  ++ L++   C+  ++ +       M++ G   +     ++I+   + G +
Sbjct: 220 LDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFV 279

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A   F+K   M  +   PN +  + +ING CK+G ++ A E+   M++ G   NV T+
Sbjct: 280 NRAFWYFKKWVQMGLN---PNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTH 336

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
             LIDG  + G +E+A RL  ++V+     PN   Y   I+    E  +  A  +L  M 
Sbjct: 337 TALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMK 396

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ + P+  TY+ L  G C+ G   +A++L + + +E    + ++YN +I+ LCK     
Sbjct: 397 EQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFP 456

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +LL   +  GL  D +TY  LI  +C+  + + A+ ++  M KV  +P++  YN +I
Sbjct: 457 EAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLI 516

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
              C+   ++ ++ L + +  +GLL    TY ++I GY  +G I+ A   F +MR+ G  
Sbjct: 517 ATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCK 576

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            + + Y  LI+ LC      +A +L + MI +G+ P  VT  TL   + K 
Sbjct: 577 PDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQ 627



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 190/381 (49%), Gaps = 7/381 (1%)

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
           FW  +K+ V  G   N+  F+ +I  LCK   +++A  +   M++ G  PNV     +I+
Sbjct: 283 FW-YFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G  E A +LF K+  +  D+  PN  T+ C+ING+CK  ++  AE +   M + G
Sbjct: 342 GLCKKGWTEKAFRLFLKL--VRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQG 399

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N  TY  LIDG+ + G+   A  L D M K G  PN   YN+ I  L  +G    A 
Sbjct: 400 LVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAY 459

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L   +   +  D  TY+IL    CR    KQA  + +++ +  +  D ++YN+LI   
Sbjct: 460 KLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATF 519

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C+   +  +++L    +  GL+P   TY ++I GYC+ G+I  A++ +  M+    KP+ 
Sbjct: 520 CRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDS 579

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSE 558
           + Y ++I+GLC ++ LD A  L +     GL    +T  TL   Y   G  A A  +   
Sbjct: 580 ITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILER 639

Query: 559 MRNVGIAVNKVGYNILINFLC 579
           +    + +  V  N LI  LC
Sbjct: 640 LEK-KLWIRTV--NTLIRKLC 657



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 184/366 (50%), Gaps = 2/366 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
            C++  F ++G+++ A  +   M   G+    R    +ID     G  + A ++ DEM+ 
Sbjct: 162 QCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLD 221

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           R ++P++  Y   +      G +      L DMI++    D+ T +++       G V +
Sbjct: 222 RAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNR 281

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF    + ++  +  +  +++ LIN LCK  ++  A ++L  M+ +G  P++ T+  LID
Sbjct: 282 AFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALID 341

Query: 473 GYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           G CK G  E A +++  + + +  KPN+  Y  +ING CK+  L+ A+ LL   +  GL+
Sbjct: 342 GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLV 401

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            +  TY  LI+G+   G    A+ +   M   G   N   YN +I+ LCK G + +A +L
Sbjct: 402 PNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKL 461

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           ++  +  G+  D VTYT L++ F +    ++ + +   M   G+ PD  TYN +I+    
Sbjct: 462 LRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCR 521

Query: 651 EKSAED 656
           +K  E+
Sbjct: 522 QKKVEE 527



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 6/296 (2%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++K +G   + + +   +    K    GR ++L   M   G+  N+ T+N +I  LCK+ 
Sbjct: 394 RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKG 453

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +  EA  L  R LKSG+  + V + ++I+E C+  D + AL +F +M  +    + P+  
Sbjct: 454 RFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV---GLQPDMH 510

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N +I  FC+  +VE +E++    +  G+     TY ++I GY R G    A++   +M
Sbjct: 511 TYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM 570

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
              G  P+++ Y + I  L  E  ++ A  +   MID  + P   T   L    C+ G  
Sbjct: 571 RDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDS 630

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
             A  +  ++ ++  +    + N LI  LC    +  A      ++ + L  D IT
Sbjct: 631 ATAMIILERLEKKLWI---RTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 7/313 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+    + G    AY+++  +  +G + +I  +N  +  L K       +KL +  
Sbjct: 406 TYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRG 465

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   +  T+ ++I   C++   ++AL+++ RM K G+ P++  +N++I   C+   +
Sbjct: 466 LKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKV 525

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E + KLF +     G  +LP   T+  +I G+C+ G +  A +  + M   G   +  TY
Sbjct: 526 EESEKLFEE---AVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITY 582

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G       +EA +L + M+  GL P  V   +  +    +GD   A+ +L  +  
Sbjct: 583 GALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEK 642

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K       T + L + LC    V  A    +++L++ +  D  +         +SN  A 
Sbjct: 643 KLWIR---TVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFAL 699

Query: 448 AKQLLSSMIVRGL 460
               LS  I +G+
Sbjct: 700 VSD-LSERISKGI 711


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 239/471 (50%), Gaps = 30/471 (6%)

Query: 191 LVKLNEIGR---FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           L +L+++GR     K +K+M + G   +V T+N++I  LCKE  LE A SL+ +M ++G 
Sbjct: 28  LHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGF 87

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P++V +N +I+   ++G L+  + +F +M     D   P+ +T+N +IN FCK  R+  
Sbjct: 88  TPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD---PDVITYNALINCFCKFERMPK 144

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A E  + M   G+  NV TY+T ID + + G  +EA++   +M +  L PN   Y S I 
Sbjct: 145 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 204

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G++  AL ++ +++   I  +  TY+ L  GLC  G +K+A ++   +L   +  
Sbjct: 205 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 264

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +Y  L++   K+  +  AK +L  M  + + PD++ YGT++ G C    +E A  + 
Sbjct: 265 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 324

Query: 488 ENMKKVEKKPNLVIYNS-----------------------IINGLCKDASLDAAKSLLQA 524
             +K+     N VIY +                       +++GLCK+   + AK L   
Sbjct: 325 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDE 384

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G++ D I Y  LI+G   +G + EA  +   M  +G+ ++   Y  LI  L   G 
Sbjct: 385 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ 444

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            Q+AR L+  MI  G++PD V Y  L+ ++      +E +EL ++M   G+
Sbjct: 445 VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 224/427 (52%), Gaps = 16/427 (3%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +++ L K  + + +   +  M  +GI  +V  +N++I+  C+ GDLE A  LF +M  
Sbjct: 25  NALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-- 82

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                  P+ VT+N +I+G  KLG ++    I   M  A  D +V TY  LI+ + +   
Sbjct: 83  -KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 141

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A     EM   GL PN V Y++ I     EG ++ A+    DM    + P+ FTY+ 
Sbjct: 142 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTS 201

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L    C+ G + +A KL  ++L+  +  +  +Y  L++ LC+   +  A+++  +M+  G
Sbjct: 202 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 261

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           + P+  TY  L+ G+ K   +E A  + + MK+   KP+L++Y +I+ GLC ++ L+ AK
Sbjct: 262 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 321

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L+   +  G+  +A+ Y TL++ YF +G+  EA  +  EM +            L++ L
Sbjct: 322 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD------------LVDGL 369

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK  C++ A++L   M+  G++PD + YT L+    K+ + +E + L D M+  G+  D 
Sbjct: 370 CKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 429

Query: 639 QTYNAII 645
             Y A+I
Sbjct: 430 HAYTALI 436



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 259/525 (49%), Gaps = 42/525 (8%)

Query: 43  LRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVH 102
           L+ RK+++  +  P   N+L++R+    R    L+ +F+  +G     +  ++ S    +
Sbjct: 10  LKMRKFRVFPK--PRSCNALLHRLSKVGRGD--LSRKFFKDMG-----AAGIKRSVFTYN 60

Query: 103 LLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIG 160
           +++++      L   G+L  A S         L    +    TP +  +++L+    ++G
Sbjct: 61  IMIDY------LCKEGDLEMARS---------LFTQMKEAGFTPDIVTYNSLIDGHGKLG 105

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
             +    + +++K       +  +N  ++   K   + + ++   EM + G   NV T++
Sbjct: 106 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYS 165

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
             I A CKE  L+EA+  +  M +  + PN   +  +I+  C+ G+L  ALKL  ++ + 
Sbjct: 166 TFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI-LQ 224

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +G  +  N VT+  +++G C+ GR++ AEE+  AM+ AG+  N  TY  L+ G+ +    
Sbjct: 225 AG--IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 282

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           E A  +  EM ++ + P+ ++Y + +  L  E  +E A  ++ ++ +  I  +   Y+ L
Sbjct: 283 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTL 342

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
                ++G   +A  L  ++L+            L++ LCK+N    AK+L   M+ +G+
Sbjct: 343 MDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGM 390

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +PD I Y  LIDG  K GN++ A+ + + M ++  + +L  Y ++I GL     +  A++
Sbjct: 391 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 450

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           LL      G+L D + Y  LI  Y+  GK+ EA  + +EM   G+
Sbjct: 451 LLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 128/227 (56%), Gaps = 1/227 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           ++YNI+I+YLCK  +L  A+ L + M   G  PDI+TY +LIDG+ K G ++  + ++E 
Sbjct: 57  FTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQ 116

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           MK  +  P+++ YN++IN  CK   +  A   L   +  GL  + +TY+T I+ +   G 
Sbjct: 117 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + EA   F +MR V +  N+  Y  LI+  CK G   +A +L++ ++  GI  + VTYT 
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 236

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           L+    +    +E  E+   M+ +GV+P+ +TY A++   +  K  E
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 283



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 146/319 (45%), Gaps = 5/319 (1%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWL--FAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           EEA     +M K  + P     N+ +H L     GD+    F   DM    I    FTY+
Sbjct: 3   EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF--KDMGAAGIKRSVFTYN 60

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           I+   LC+ G ++ A  L  Q+ E     D  +YN LI+   K   L     +   M   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
              PD+ITY  LI+ +CK   +  A +    MK    KPN+V Y++ I+  CK+  L  A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
                  +R+ L  +  TY +LI+     G +AEA  +  E+   GI +N V Y  L++ 
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LC+ G  ++A E+ + M+  G+ P+  TYT LV  F K    E   ++  +M    + PD
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 638 NQTYNAIISPLLGEKSAED 656
              Y  I+  L  E   E+
Sbjct: 301 LLLYGTILWGLCNESRLEE 319



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 162/378 (42%), Gaps = 61/378 (16%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++AL+    +      A++ + ++K  G   ++  ++ F+    K   +    
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K + +M       N  T+  +I A CK   L EAL L   +L++GI  NVV +  +++  
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK---- 317
           C+ G ++ A ++FR    M    V PN  T+  +++GF K   +E+A++I   M +    
Sbjct: 242 CEEGRMKEAEEVFR---AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 298

Query: 318 -------------------------------AGIDCNVRTYATLIDGYARGGSSEEAL-- 344
                                          +GI+ N   Y TL+D Y + G + EAL  
Sbjct: 299 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 358

Query: 345 ---------------------RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
                                +L DEM+ +G+MP+ + Y + I      G+++ AL +  
Sbjct: 359 LEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 418

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            MI+  +  D   Y+ L  GL  +G V++A  L ++++ + ++ D   Y  LI       
Sbjct: 419 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALG 478

Query: 444 NLAAAKQLLSSMIVRGLI 461
            +  A +L + M  RG+I
Sbjct: 479 KVDEALELQNEMAKRGMI 496



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 166/386 (43%), Gaps = 38/386 (9%)

Query: 60  NSLVNRVVSEFRKSPKLALEFYTWVGENN------RFSHSLESSCA------IVHLLVNW 107
           N+L+N    +F + PK A EF   +  N        +S  +++ C        +   V+ 
Sbjct: 130 NALIN-CFCKFERMPK-AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187

Query: 108 RR-------FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
           RR       F    L+  N  + N    L+ +E +L +    K     + AL+    + G
Sbjct: 188 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG--IKLNVVTYTALLDGLCEEG 245

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
             + A +V + +   G + +   +   +   +K  E+     + KEM       ++  + 
Sbjct: 246 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 305

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
            +++ LC E +LEEA  L   + +SGI  N V +  +++   + G    AL L  +M   
Sbjct: 306 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD- 364

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
                         +++G CK    E A+++   M+  G+  +   Y  LIDG  + G+ 
Sbjct: 365 --------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNL 410

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +EAL L D M++ G+  +   Y + I  L   G V+ A  +L +MI K + PD   Y  L
Sbjct: 411 QEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCL 470

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMV 426
            K     G V +A +L N++ +  M+
Sbjct: 471 IKKYYALGKVDEALELQNEMAKRGMI 496



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 1/180 (0%)

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNT 538
           +E A + +  M+K    P     N++++ L K    D ++   +     G+  ++ TYN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I+     G +  A ++F++M+  G   + V YN LI+   K G   +   + + M    
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             PD +TY  L+  F K     +  E   +M  +G+ P+  TY+  I     E   ++ +
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL+ EM+  G + +   +  +I    K   L+EAL+L  RM++ G+  ++  +  +I   
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 439

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G ++ A  L  +M    G  VLP+ V + C+I  +  LG+V+ A E++  M K G+ 
Sbjct: 440 SHSGQVQKARNLLDEM---IGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496

Query: 322 CNVRTYA 328
             +  +A
Sbjct: 497 TGLSDHA 503


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 223/428 (52%), Gaps = 5/428 (1%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +L+EA+ +   M   G+ PN    N II    ++G +E+A  LF +M V     V P+S+
Sbjct: 150 RLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCV---RGVQPDSI 206

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           ++  ++  +CK+G +  A++    M++ G   +  T+  +I  ++  G +  AL     +
Sbjct: 207 SYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRL 266

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V  GL PN + +   I  L   G ++ A  +L +M+ K   P+ +T++ L  GLC+ G  
Sbjct: 267 VDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWT 326

Query: 411 KQAFKLHNQ-VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++AF+L  + V  E+   +  +Y  +I+  C+ + L  A+ LLS M  +GL+P+  TY T
Sbjct: 327 EKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTT 386

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+CK GN E A  +   M      PNL  YN+I+NGLCK   +  A  +L+   + G
Sbjct: 387 LIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNG 446

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D  TYN L++ +     I +A A+F++M  +GI  +   Y  LI   C+    +++ 
Sbjct: 447 LKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESE 506

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              +  +  GIIP   TYT+++  + +  +    ++    +   G +PD+ TY AIIS L
Sbjct: 507 MFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGL 566

Query: 649 LGEKSAED 656
             +   ++
Sbjct: 567 CKQSKRDE 574



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 228/470 (48%), Gaps = 5/470 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V   +V + +++G  + A +++ ++  +G   +    N  +    ++  +     L++EM
Sbjct: 137 VMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEM 196

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  ++ +++   CK   + EA      ML+ G   +   F +II+     G  
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYT 256

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL  FR++  M  +   PN +   C+I G CK G ++ A E+   M+  G   NV T+
Sbjct: 257 TRALWYFRRLVDMGLE---PNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTH 313

Query: 328 ATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
            +LIDG  + G +E+A RL  ++V+     PN + Y + I     E  +  A  +LS M 
Sbjct: 314 TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ + P+  TY+ L  G C+ G  ++A+ L N +  E    +  +YN ++N LCK   + 
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++L      GL PD  TY  L+  +CK  NI  A+ ++  M K+  +P++  Y ++I
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 493

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
              C++  +  ++   + + RIG++    TY ++I GY   G +  A   F  + + G A
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            + + Y  +I+ LCK     +AR L   MI  G++P  VT  TL   + K
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 195/385 (50%), Gaps = 5/385 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +VG L+ A+++  +M       ++PN+ T N II    ++G VE+AE +   M   G+  
Sbjct: 147 EVGRLKEAVEMVIEM---HNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQP 203

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  +Y  ++  Y + G+  EA +    M++RG + +N  +   I     +G    AL+  
Sbjct: 204 DSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYF 263

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             ++D  + P+   ++ + +GLC+ G +KQAF++  +++ +    + Y++  LI+ LCK 
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKK 323

Query: 443 NNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                A +L   ++      P+++TY  +I GYC+   +  A  +   MK+    PN   
Sbjct: 324 GWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNT 383

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y ++I+G CK  + + A  L+      G    + TYN ++NG    G++ EA+ M  +  
Sbjct: 384 YTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGF 443

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  +K  YNIL++  CK    +QA  L   M+  GI PD  +YTTL+  F +    +
Sbjct: 444 QNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMK 503

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           E     ++ V  G+ P N+TY ++I
Sbjct: 504 ESEMFFEEAVRIGIIPTNKTYTSMI 528



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 191/365 (52%), Gaps = 2/365 (0%)

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           C++  F ++GR++ A E+   M   G+  N RT   +I   +  G  E A  L +EM  R
Sbjct: 140 CMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR 199

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P+++ Y   +      G++  A   LS M+++    D+ T++++       G   +A
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
                ++++  +  +  ++  +I  LCK  ++  A ++L  M+ +G  P++ T+ +LIDG
Sbjct: 260 LWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDG 319

Query: 474 YCKGGNIEGAVQVYENMKKVE-KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
            CK G  E A +++  + + E  KPN++ Y ++I+G C++  L+ A+ LL   +  GL+ 
Sbjct: 320 LCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           +  TY TLI+G+   G    A+ + + M + G + N   YN ++N LCK G  Q+A +++
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +    +G+ PD  TY  L++   K  +  + + L + M+  G+ PD  +Y  +I+    E
Sbjct: 440 EDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRE 499

Query: 652 KSAED 656
              ++
Sbjct: 500 NRMKE 504



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 164/345 (47%), Gaps = 4/345 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  ++   +  G T  A    ++L   G   ++  +   +  L K   I + +++ +E
Sbjct: 241 ATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEE 300

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFNMIINEACQVG 265
           MV  G+  NV T   +I  LCK+   E+A  L+ ++++S    PNV+ +  +I+  C+  
Sbjct: 301 MVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRED 360

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            L  A  L  +   M    ++PN+ T+  +I+G CK G  E A ++   M   G   N+ 
Sbjct: 361 KLNRAEMLLSR---MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLC 417

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  +++G  + G  +EA ++ ++  + GL P+   YN  +     + ++  AL + + M
Sbjct: 418 TYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKM 477

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +   I PD  +Y+ L    CR   +K++     + +   ++    +Y  +I   C+  NL
Sbjct: 478 LKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNL 537

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
             A +    +   G  PD ITYG +I G CK    + A  +Y++M
Sbjct: 538 TLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSM 582


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 225/429 (52%), Gaps = 4/429 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F  ++ +L K       +SL+ +M  +GI  ++V  +++IN   Q+G    +  +  K+ 
Sbjct: 75  FGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKIL 134

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M  +   PN +T   +I G C  G++  A +    ++  G   N  +Y TLI+G  + G
Sbjct: 135 KMGYE---PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVG 191

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  AL+L   +  + + PN V+YN+ I  +     V  A  + S+M+ K I PD  TY+
Sbjct: 192 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +K A  L N+++ E++  + Y++NIL++  CK   L  AK +L+ M+ +
Sbjct: 252 ALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQ 311

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD+ TY +L+D YC    +  A  ++  + +    PN+  Y+ +I+G CK   +D A
Sbjct: 312 GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEA 371

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +L +      ++ D +TYN+LI+G    GKI+ A  +  EM + G+  +K+ YN +++ 
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDA 431

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L+  M   GI PD  TYTTLV    KN   E+   + +D+++ G   D
Sbjct: 432 LCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILD 491

Query: 638 NQTYNAIIS 646
              Y A+I 
Sbjct: 492 VNIYTAMIQ 500



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 247/487 (50%), Gaps = 5/487 (1%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L  K    SI  +   L  LVK N       L+++M   G   ++   +++I    +  +
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
              + S+  ++LK G  PNV+    +I   C  G +  AL+   K+  +       N V+
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHL---NKVS 179

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +ING CK+G+   A ++   +    +  NV  Y T+ID   +     EA  L  EMV
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +G+ P+ V YN+ I      G ++ A  + + MI ++I P+ +T++IL  G C+   +K
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  +   ++++ +  D ++YN L++  C    +  AK + +++  RG+ P+I +Y  +I
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G+CK   ++ A+ +++ M      P++V YNS+I+GLCK   +  A  L+      G+ 
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 419

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D ITYN++++    N ++ +A A+ ++M++ GI  +   Y  L++ LCK G  + AR +
Sbjct: 420 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIV 479

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
            + +++ G I D   YT ++  F  +   +E ++L   M  +G  P+  TY  II  L  
Sbjct: 480 FEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLF- 538

Query: 651 EKSAEDQ 657
           +K   D+
Sbjct: 539 DKDENDK 545



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 224/435 (51%), Gaps = 4/435 (0%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +  +++  GY  NV T   +I  LC + ++ +AL  + +++  G   N V +  +IN 
Sbjct: 127 FSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLING 186

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+VG    AL+L R++    G  V PN V +N II+  CK+  V  A ++   M+  GI
Sbjct: 187 LCKVGQTSAALQLLRRV---DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 243

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY  LI G+   G  ++A  L ++M+   + PN   +N  +     E  ++ A  
Sbjct: 244 SPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKN 303

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL+ M+ + I PD FTY+ L    C    V +A  + N + +  +  + +SY+I+I+  C
Sbjct: 304 VLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFC 363

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A  L   M    +IPD++TY +LIDG CK G I  A+++ + M       + +
Sbjct: 364 KIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKI 423

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            YNSI++ LCK+  +D A +LL   +  G+  D  TY TL++G   NG++ +A  +F ++
Sbjct: 424 TYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDL 483

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G  ++   Y  +I   C  G + ++ +L+  M  +G IP+ VTY  ++         
Sbjct: 484 LVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDEN 543

Query: 620 EEVIELHDDMVLSGV 634
           ++  +L  +M+  G+
Sbjct: 544 DKAEKLLREMITRGL 558



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 267/526 (50%), Gaps = 12/526 (2%)

Query: 79  EFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL----LMGNLMSANSVSPLEFLEG 134
             Y+   EN+   H+L SS    + L++ +    ++     ++G+L+ +N  S +  L  
Sbjct: 40  RLYSQFHENDDNKHNLVSS---FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHR 96

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
            ++ +    +   +   L+   +Q+G    ++ V+ K+   G+  ++      +  L   
Sbjct: 97  QME-FNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLK 155

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
            +I +  + + ++V+ G+  N  ++  +I  LCK  +   AL L  R+    + PNVV +
Sbjct: 156 GQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 215

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N II+  C+V  +  A  L+ +M V  G S  P+ VT+N +I+GFC +G+++ A ++   
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEM-VSKGIS--PDVVTYNALISGFCIVGKMKDATDLFNK 272

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           MI   I+ NV T+  L+DG+ +    +EA  +   M+K+G+ P+   YNS +       +
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE 332

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V  A  + + +  + + P+  +YSI+  G C+   V +A  L  ++   +++ D  +YN 
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNS 392

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LCK   ++ A +L+  M  RG+  D ITY +++D  CK   ++ A+ +   MK   
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAF 553
            +P++  Y ++++GLCK+  L+ A+ + +     G +LD   Y  +I G+  +G   E+ 
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
            + S+M   G   N V Y I+I  L       +A +L++ MI  G+
Sbjct: 513 DLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 182/692 (26%), Positives = 312/692 (45%), Gaps = 127/692 (18%)

Query: 42  NLRQRKWKILEQMAPSLTN-SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI 100
           N   RKW    Q    LT+ +L+ RV++  R  P++A  F+ W+   +    S ++  A+
Sbjct: 67  NKPNRKWSS-HQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAM 125

Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
           + +L      ++ L+    L++  S+         L  +EI        D L+       
Sbjct: 126 LEILA-----ENDLMSEAYLVAERSID--------LGMHEID-------DLLI------- 158

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
             +G++D +  LK+    + ++          K +   +F   +++M+  G++ +V   N
Sbjct: 159 --DGSFDKLIALKLLDLLLWVY---------TKKSMAEKFLLSFEKMIRKGFLPSVRNCN 207

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           +V+  L     + +A ++Y  M++ GI P V+ FN +++   + GDLE   K++ +M   
Sbjct: 208 IVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM--- 264

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
              ++  + VT+N +INGF K G++E A      M ++G      ++  LI+GY + G  
Sbjct: 265 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 324

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           ++A  + DEM+  G+ P    YN  I  L   G ++ A  +LS M      PD  +Y+ L
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTL 380

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G  + G   +A  L + +    +     +YN LI+ LC+S NL  A++L   M  + +
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN---------------------- 498
            PD+ITY TL+ G+ K GN+  A +VY+ M +   KP+                      
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500

Query: 499 --------------LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
                         L IYN  I+GLCK  +L  A    +   R+GL+ D +TY T+I GY
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560

Query: 544 FING-----------------------------------KIAEAFAMFSEMRNVGIAVNK 568
             NG                                   ++ +AF   +EM+  G+  N 
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS---PEEVIEL 625
           + +N L+  +CK G   +A   +  M   GI P+  +YT L+   SKNC     EEV++L
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI---SKNCDFEKWEEVVKL 677

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           + +M+   + PD  T+ A+   L  EK  E +
Sbjct: 678 YKEMLDKEIEPDGYTHRALFKHL--EKDHESR 707


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 182/690 (26%), Positives = 311/690 (45%), Gaps = 127/690 (18%)

Query: 42  NLRQRKWKILEQMAPSLTN-SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI 100
           N   RKW    Q    LT+ +L+ RV++  R  P++A  F+ W+   +    S ++  A+
Sbjct: 104 NKPNRKWSS-HQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAM 162

Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
           + +L      ++ L+    L++  S+         L  +EI        D L+       
Sbjct: 163 LEILA-----ENDLMSEAYLVAERSID--------LGMHEID-------DLLI------- 195

Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
             +G++D +  LK+    + ++          K +   +F   +++M+  G++ +V   N
Sbjct: 196 --DGSFDKLIALKLLDLLLWVY---------TKKSMAEKFLLSFEKMIRKGFLPSVRNCN 244

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           +V+  L     + +A ++Y  M++ GI P V+ FN +++   + GDLE   K++ +M   
Sbjct: 245 IVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM--- 301

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
              ++  + VT+N +INGF K G++E A      M ++G      ++  LI+GY + G  
Sbjct: 302 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 361

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           ++A  + DEM+  G+ P    YN  I  L   G ++ A  +LS M      PD  +Y+ L
Sbjct: 362 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTL 417

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G  + G   +A  L + +    +     +YN LI+ LC+S NL  A++L   M  + +
Sbjct: 418 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 477

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN---------------------- 498
            PD+ITY TL+ G+ K GN+  A +VY+ M +   KP+                      
Sbjct: 478 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 537

Query: 499 --------------LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
                         L IYN  I+GLCK  +L  A    +   R+GL+ D +TY T+I GY
Sbjct: 538 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 597

Query: 544 FING-----------------------------------KIAEAFAMFSEMRNVGIAVNK 568
             NG                                   ++ +AF   +EM+  G+  N 
Sbjct: 598 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 657

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS---PEEVIEL 625
           + +N L+  +CK G   +A   +  M   GI P+  +YT L+   SKNC     EEV++L
Sbjct: 658 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI---SKNCDFEKWEEVVKL 714

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           + +M+   + PD  T+ A+   L  EK  E
Sbjct: 715 YKEMLDKEIEPDGYTHRALFKHL--EKDHE 742


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 247/519 (47%), Gaps = 55/519 (10%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK-------------- 228
           ++N  ++ L K  E+ + + L+ EM+  G+  N+ T+N VI  LCK              
Sbjct: 141 SYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQM 200

Query: 229 --ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
             + +LEEA+ L  +M   G+ P+VV ++++I+  C++G    A  +F  M V  G +  
Sbjct: 201 FDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSM-VRRGQN-- 257

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P++ T+  +++G+   G +    ++   MI+ GI      +  LI  YA+  + ++A+  
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             EM ++G  PN V Y + I  L   G VE A+   S M+ + + PD  T++ L  GLC 
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377

Query: 407 NGCVKQAFKL-------------------------HNQVLEEH-------MVG---DAYS 431
            G  K+  KL                           +VLE H        VG   D  S
Sbjct: 378 IGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVS 437

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y ILI+  C    +  + +LL  M+  GL PD +TY  L++GYCK G ++ A+ +Y  M 
Sbjct: 438 YTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMF 497

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIA 550
             + KPN + YN I++GL     + AA+         G+   I TYN ++ G   N  + 
Sbjct: 498 SKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVD 557

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EA  MF  +R+    +    +NI+I  L K G    A+ L   ++  G++PD + Y  ++
Sbjct: 558 EALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMI 617

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
               +    EE  EL   M  +G + +++T NAI+  LL
Sbjct: 618 QSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLL 656



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 214/449 (47%), Gaps = 34/449 (7%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMII-------NEACQVGDLEFALKLFRKMGVMSGDS 284
           LE+AL+L+  +L      +V  FN ++       + + Q      A+ LF  M  +  + 
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 285 VLPNSVTHNCIINGFCKLGRVEFA--EEIR------YAMIKAGIDC--NVRTYATLIDGY 334
           +  ++ T   +I  FC +G ++FA  EE R      + M   G +C  NV +Y  +I+G 
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI----------------HWLFAEGDVEGA 378
            + G  ++A  L  EM+ +G  PN V YNS I                  +F +G +E A
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
           + +L  M    + PD  TYS+L    C+ G   +A  + + ++      DAY+Y  L++ 
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
                 L     LL+ MI  G+  +   +  LI  Y K   ++ A+  +  M++    PN
Sbjct: 270 YATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPN 329

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           +V Y ++I+ LCK   ++ A S        GL  D IT+ +LI+G    G+  +   +  
Sbjct: 330 VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSF 389

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM N GI  N +  N +++ LCK G   +A +    +I  G+ PD V+YT L+  +  + 
Sbjct: 390 EMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDG 449

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             +E I+L   MV  G+ PDN TY+A+++
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLN 478



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 227/486 (46%), Gaps = 58/486 (11%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY--EICKATPA- 147
           + +++ + A++  + +  + ++A+ L+   MS   + P      LL  Y  +I + T A 
Sbjct: 187 AQAMDKAEAVLQQMFDKGQLEEAVRLLKK-MSGGGLQPDVVTYSLLIDYYCKIGRCTEAR 245

Query: 148 -VFDALVRACTQIGA-----------TEGA----YDVIQKLKVKGHSVSIHAWNNFLSHL 191
            +FD++VR      A           T+GA    +D++  +   G  +  H +N  +   
Sbjct: 246 NIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAY 305

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K   + +    + EM   G+  NV T+  VI  LCK  ++E+A+S + +M+  G+ P++
Sbjct: 306 AKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDI 365

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + F  +I+  C +G+ +   KL  +M       + PN++  N I++  CK GRV  A + 
Sbjct: 366 ITFTSLIHGLCTIGEWKKVEKLSFEM---INRGIHPNAIFLNTIMDSLCKEGRVLEAHDF 422

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              +I  G+  +V +Y  LIDGY   G  +E+++L   MV  GL P+NV Y++ ++    
Sbjct: 423 FDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCK 482

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTK----------------------------- 402
            G V+ AL +  +M  K + P+  TY+I+                               
Sbjct: 483 NGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINT 542

Query: 403 ------GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
                 GLC N  V +A ++   +  +    +  ++NI+I  L K   +  AK L S+++
Sbjct: 543 YNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAIL 602

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             GL+PD I YG +I  + + G +E + +++ +M+K     N    N+I+  L +   + 
Sbjct: 603 PSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVR 662

Query: 517 AAKSLL 522
            A + L
Sbjct: 663 RAGTYL 668



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/410 (20%), Positives = 182/410 (44%), Gaps = 33/410 (8%)

Query: 53  QMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNR-FSHSLESSCAIVHLLVNWRRFD 111
           Q    L + + N ++  + K+  L      ++    + FS ++ +   ++ +L    R +
Sbjct: 288 QDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVE 347

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVI 169
           DA+     ++S          EGL         +P +  F +L+     IG     +  +
Sbjct: 348 DAVSHFSQMVS----------EGL---------SPDIITFTSLIHGLCTIGE----WKKV 384

Query: 170 QKLKVKGHSVSIHA----WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
           +KL  +  +  IH      N  +  L K   +      + +++  G   +V ++ ++I  
Sbjct: 385 EKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDG 444

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
            C + K++E++ L  RM+  G+ P+ V ++ ++N  C+ G ++ AL L+R+M   S D V
Sbjct: 445 YCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM--FSKD-V 501

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            PN++T+N I++G    GRV  A E    ++ +GI   + TY  ++ G       +EALR
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           +   +  +        +N  I  L   G +  A  + S ++   + PD   Y ++ +   
Sbjct: 562 MFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHI 621

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
             G ++++ +L   + +     ++ + N ++  L +  ++  A   L+ +
Sbjct: 622 EEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKI 671



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 149/355 (41%), Gaps = 60/355 (16%)

Query: 336 RGGSS--EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA----------LF-VL 382
           R GS   E+AL L DE++ R    +   +N  +  + A GD   +          LF  +
Sbjct: 24  RSGSLGLEDALNLFDELLPRARSASVHAFNRVL-TVVAHGDSSSSQRHGAALAVSLFNTM 82

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN--YLC 440
           + +    +  D  T+ IL +  C  G +  A       LEE   G   + +++ +  Y C
Sbjct: 83  AQVGVNKLATDACTFGILIRCFCNVGLLDFA-------LEEESRGSRAAVHMMADDGYNC 135

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
                                P++++Y  +I+G  K G ++ A  ++  M      PN+V
Sbjct: 136 P--------------------PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIV 175

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-----------------DAITYNTLINGY 543
            YNS+I+GLCK  ++D A+++LQ     G L                 D +TY+ LI+ Y
Sbjct: 176 TYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYY 235

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G+  EA  +F  M   G   +   Y  L++     G      +L+ +MI  GI  + 
Sbjct: 236 CKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLED 295

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             +  L+  ++KN + ++ +    +M   G SP+  TY  +I  L      ED V
Sbjct: 296 HVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAV 350



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 9/225 (4%)

Query: 170 QKLKVKGHSVSIH------AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
           + +K+ G  VSI        ++  L+   K   +     LY+EM S     N  T+N+++
Sbjct: 453 ESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIIL 512

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
           + L    ++  A   Y +++ SGI   +  +N+++   C+   ++ AL++F+  G+ S +
Sbjct: 513 HGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQ--GLRSKE 570

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
             L    T N +I G  K+GR+  A+ +  A++ +G+  +   Y  +I  +   G  EE+
Sbjct: 571 FQL-EVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEES 629

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
             L   M K G   N+   N+ +  L  +GDV  A   L+ + +K
Sbjct: 630 DELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 236/474 (49%), Gaps = 10/474 (2%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           ++   +  L      G    L + M + G   +V T+  +I  LC   +L+ AL L   M
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
             SG+ PNVV ++ ++   C+ G  +   K+F  M   S   + P+ +    +I+  CK 
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDM---SRRGIKPDVIMFTGLIDDLCKE 241

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G+   A +++  M++ G++ NV TY  LI+   + GS  EAL L  EM  +G+ P+ V Y
Sbjct: 242 GKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTY 301

Query: 363 NSTIHWLFAEGDVEGALFVLSDMI--DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           N+ I  L    +++ A+  L +MI  D  + PD  T++ +  GLC+ G + QA K+   +
Sbjct: 302 NTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMM 361

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            E   + +  +YN LI    + + +  A  L+  + + GL PD  TY  LI+G+ K   +
Sbjct: 362 AERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEV 421

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLI 540
           + A +    M++   K  L  Y  ++  +C+   ++ A  L     +   LDAI Y+T+I
Sbjct: 422 DRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMI 481

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G   +G +     +  +M + G+A + V Y++LIN   K G  ++A  ++K M   G +
Sbjct: 482 HGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFV 541

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII-----SPLL 649
           PD   + +L+  +S     ++V++L  +M    V+ D +  + II     +PLL
Sbjct: 542 PDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIRLPQQTPLL 595



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 225/447 (50%), Gaps = 22/447 (4%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKATP----- 146
           S   ++  L   RR  +A+ L+ ++ +    A+ V+    + GL D+ E+  A       
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184

Query: 147 ---------AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
                     V+  L+R   + G  +    V + +  +G    +  +   +  L K  + 
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
           G+  K+   MV  G   NV T+N++I +LCKE  + EAL+L   M   G+ P+VV +N +
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTL 304

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVL-PNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           I     V +++ A+    +M  + GD+V+ P+ VT N +I+G CK+GR+  A ++R  M 
Sbjct: 305 IAGLSGVLEMDEAMSFLEEM--IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMA 362

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           + G  CN+ TY  LI G+ R    + A+ L DE+   GL P++  Y+  I+      +V+
Sbjct: 363 ERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVD 422

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A   L  M  + I  + F Y  L   +C+ G +++A  L N+ ++++   DA +Y+ +I
Sbjct: 423 RAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNE-MDKNCGLDAIAYSTMI 481

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +  CKS ++   KQL+  M+  GL PD +TY  LI+ Y K G++E A +V + M      
Sbjct: 482 HGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFV 541

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQ 523
           P++ +++S+I G   +   D    L+ 
Sbjct: 542 PDVAVFDSLIKGYSAEGQTDKVLKLIH 568



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 213/442 (48%), Gaps = 14/442 (3%)

Query: 213 VENVNTFNLVIYALCKEC--KLEEALSLYYRMLKSG---IWPNVVCFNMIINEACQVGDL 267
           V +  ++N V+ ALC+     L +A SL   M +       PN V +  ++   C     
Sbjct: 80  VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRT 139

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A+ L R M       V  + VT+  +I G C    ++ A E+   M  +G+  NV  Y
Sbjct: 140 GEAVALLRSM---QASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVY 196

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + L+ GY R G  ++  ++ ++M +RG+ P+ +++   I  L  EG    A  V   M+ 
Sbjct: 197 SCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQ 256

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P+  TY++L   LC+ G V++A  L  ++ ++ +  D  +YN LI  L     +  
Sbjct: 257 RGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDE 316

Query: 448 AKQLLSSMIVRGLI--PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           A   L  MI    +  PD++T+ ++I G CK G +  AV+V E M +     NLV YN +
Sbjct: 317 AMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYL 376

Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I G  +   +  A +L+      GL  D+ TY+ LING+    ++  A      MR  GI
Sbjct: 377 IGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGI 436

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILH-GIIPDYVTYTTLVTRFSKNCSPEEVI 623
                 Y  L+  +C+ G  ++A  L   M  + G+  D + Y+T++    K+   + V 
Sbjct: 437 KAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGACKSGDMKTVK 494

Query: 624 ELHDDMVLSGVSPDNQTYNAII 645
           +L  DM+  G++PD  TY+ +I
Sbjct: 495 QLIQDMLDEGLAPDAVTYSMLI 516


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 227/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+    + G    A +  +  +     V        L HL+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A ++   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+   +  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 161/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK N +  A +L   M+V+ L+P+ +T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK+  +D A  L        L
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKAL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAND 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 1/255 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L  G   +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 71  DIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+ +A  +F EM    +  N V +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    K    ++  +L D+M +
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSM 310

Query: 632 SGVSPDNQTYNAIIS 646
            G+ PD  TY  +I 
Sbjct: 311 KGLQPDKITYTTLID 325


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 238/479 (49%), Gaps = 4/479 (0%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +++++  +G  +  +     ++   + N+ G  + L+ +  S      V+ F  +I  L 
Sbjct: 17  LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILV 76

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
              + E A  +Y ++++ G   +   +N++I    + G L+ A+++FR+M +   +   P
Sbjct: 77  NSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSE---P 133

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T+  ++N   K GRV+ A     AM++ G+  N+ TY  L+D + + G  + AL L 
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM +RG  P+ V YN  +  L + G V  A  +   M      PD +TYS L  GL ++
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V++A K+  ++++  +  D  +YN L+  L K+ N+    +L+  M  +G  PD  ++
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSF 313

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            T++D   K    + A +V+  M +   KP+L+ YN +I+   +      A+ +L+    
Sbjct: 314 NTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G + +  TYN+LI+    +G++ EAFA+  EM   G   + V YN L++ L K G  Q+
Sbjct: 374 AGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQR 433

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           A  L + M   G+ PD ++Y   +   + +   +E + L  DM   G   D   Y  +I
Sbjct: 434 AARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/551 (24%), Positives = 248/551 (45%), Gaps = 75/551 (13%)

Query: 48  WKILEQMAPSLTNSLVNRVVSEFRK-SPKLALEFYTWVGENNR-------FSHSLESSCA 99
           W IL+ +      +L+  +V+E R   P   ++  T  G  N+       F+ +   +C+
Sbjct: 8   WGILDPL-----ETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACS 62

Query: 100 --------IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA 151
                   ++ +LVN   F+ A L+   L+                    C+     ++ 
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKG-----------------CQLDRFAYNV 105

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+R   + G  + A ++ +++K+KG     + +   ++ L K   +      +  M+  G
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG 165

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              N+ T+NL++ A  K  +L+ AL L+  M + G  P+VV +N++++  C  G +  A 
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAAR 225

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           KLF K   M+GD   P+S T++ ++NG  K GRVE A ++   M+  G+  ++  Y +L+
Sbjct: 226 KLFHK---MTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
              A+ G+ +   +L  EM ++G  P+   +N+ +  L      + A  V + M++    
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  +Y+IL     R G   QA ++  +++E   + +  +YN LI++L     +  A  +
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M   G  PD++TY  L+D   K G  + A ++++ MK    +P+ + Y   I+GL  
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462

Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           D  LD                                  EA  +F +M+ VG  V+K  Y
Sbjct: 463 DDRLD----------------------------------EALVLFKDMKAVGCPVDKAMY 488

Query: 572 NILINFLCKFG 582
            ILI    + G
Sbjct: 489 RILIRAAHRAG 499



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 214/450 (47%), Gaps = 10/450 (2%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L KEMV+ G     NT   +I A  +  K  +A  L+ +       P V  F  +I+   
Sbjct: 17  LLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILV 76

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
             G+ E A  +++K+ V  G  +  +   +N +I  F + G+++ A E+   M   G + 
Sbjct: 77  NSGEFERAELVYKKL-VQKGCQL--DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP 133

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY  L++   + G  +EA    D M++RGL PN   YN  +      G ++ AL + 
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M  +   P   TY+IL   LC  G V  A KL +++  +    D+Y+Y+ L+N L KS
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKS 253

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK---PNL 499
             +  A ++   M+ RG+  D++ Y +L+    K GN++   +V++ MK++ +K   P+ 
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD---RVWKLMKEMSRKGFHPDA 310

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSE 558
             +N+I++ L K    DAA+ +       G   D I+YN LI+ Y   G  A+A  M  E
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G       YN LI++L   G   +A  +++ M   G  PD VTY  L+    K   
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +    L   M   GV PD  +Y   I  L
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +  ++ L+ A  ++G  + A  +  ++K +G   S+  +N  L  L     +G   K
Sbjct: 167 TPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARK 226

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +M   G   +  T++ ++  L K  ++EEA  ++  M+  G+  ++V +N ++    
Sbjct: 227 LFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLA 286

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+++   KL ++M   S     P++ + N I++   K  + + A E+   M+++G   
Sbjct: 287 KAGNMDRVWKLMKEM---SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++ +Y  LID YAR G + +A ++ +EMV+ G +P    YNS IHWL  +G V+ A  VL
Sbjct: 344 DLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVL 403

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M      PD  TY+ L   L + G  ++A +L  Q+ ++ +  D  SY + I+ L   
Sbjct: 404 EEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFD 463

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
           + L  A  L   M   G   D   Y  LI    + G+ E   Q+
Sbjct: 464 DRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 89/197 (45%), Gaps = 9/197 (4%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F+  +ES C     L+++    D+    G+   A      + LE ++++  I +     +
Sbjct: 333 FARMVESGCKPD--LISYNILIDSYARFGDAAQAR-----QMLEEMVEAGFIPETK--TY 383

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           ++L+      G  + A+ V+++++  G    +  +N  +  L K  E  R  +L+++M  
Sbjct: 384 NSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKD 443

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   +  ++ + I  L  + +L+EAL L+  M   G   +   + ++I  A + GD E 
Sbjct: 444 KGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTEL 503

Query: 270 ALKLFRKMGVMSGDSVL 286
             +L  +   M  +S L
Sbjct: 504 EAQLKHESQFMPVESRL 520


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 252/487 (51%), Gaps = 1/487 (0%)

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
           GA   +++++ +G S +   ++  +S   +L ++    + ++  +S  +  N   +N +I
Sbjct: 245 GAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNII 304

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
           +A CK   +E A ++   M + G+   +  +NM+++       ++  L +FR++   +  
Sbjct: 305 HAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTET 364

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            + P  V++ C+IN + KLG+++ A +I   M   GI  N +TY+ +IDGY + G +  A
Sbjct: 365 GLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA 424

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             + ++M   G+ P+ + YN  ++     G +  AL +L+ M      P   TY+I+  G
Sbjct: 425 FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDG 484

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
             + G ++ AF+    +        A +YN++++ L ++  +  A  ++  M+V G+ P+
Sbjct: 485 FMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPN 544

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
             +Y TLI+GY   G++  A + +  +K+V  KP+++ Y S++   CK   + +  ++  
Sbjct: 545 ERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITA 604

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G+ ++   YN L++G+   G + EA  +  +MR+ G+  +   Y   IN  CK G
Sbjct: 605 EMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAG 664

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A E ++ M   G+ P+   YTTL+  ++    PE+ +  +D+M  +G+ PD   Y+
Sbjct: 665 DMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYH 724

Query: 643 AIISPLL 649
            I++ LL
Sbjct: 725 CIMTSLL 731



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 189/373 (50%), Gaps = 5/373 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +P V  +  L+   +++G  + A  +  +++ +G   +   ++  +   V+L +    + 
Sbjct: 367 SPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFS 426

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++++M + G   +  T+N+++ A CK  ++  AL L  RM      P +  + +II+   
Sbjct: 427 VFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFM 486

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++GDL  A +  R M  M+G    P++ T+N I++G  + G+++ A  I   M+ AG+  
Sbjct: 487 KIGDLRMAFETVRDMK-MAG--FRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHP 543

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N R+Y TLI+GYA  G    A +  + + + GL P+ + Y S +      G ++  L + 
Sbjct: 544 NERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAIT 603

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++M    +  +++ Y+IL  G  + G + +A  +  ++  E +  D +SY   IN  CK+
Sbjct: 604 AEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKA 663

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++  A + +  M  +G+ P++  Y TLI G+      E A+  Y+ MK     P+  +Y
Sbjct: 664 GDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLY 723

Query: 503 NSIINGLCKDASL 515
           + I+  L   A++
Sbjct: 724 HCIMTSLLSRAAV 736



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 4/328 (1%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R +  L++ Y + G    A    + M   G+ PN   Y + IH      D+ GA+  + +
Sbjct: 193 RDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEE 252

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M  + + P+  TYS++  G  R G V+ A +   + L E+   +   YN +I+  CK+ N
Sbjct: 253 MEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGN 312

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK---KPNLVI 501
           +  A+ ++++M  +GL   +  Y  L+DGY     ++  + V+  +K   +    P +V 
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVS 372

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +IN   K   +D A  +    +  G+  +  TY+ +I+GY   G  A AF++F +M 
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMS 432

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           N GI  + + YNIL+N  CK G   +A EL+  M      P   TYT ++  F K     
Sbjct: 433 NAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLR 492

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
              E   DM ++G  P   TYN I+  L
Sbjct: 493 MAFETVRDMKMAGFRPSAATYNVIMHGL 520



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 9/260 (3%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + + A ++ ++    Q G  + A  +I ++ V G   +  ++   +     + ++G  +K
Sbjct: 507 RPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFK 566

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            +  +   G   +V  +  ++ A CK  +++  L++   M  +G+  N   +N++++   
Sbjct: 567 YFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWA 626

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q GD+  A  + +K   M  + + P+  ++   IN  CK G +  A E    M + G+  
Sbjct: 627 QRGDMWEASDIMQK---MRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQP 683

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV------E 376
           N++ Y TLI G+A     E+AL   DEM   G++P+  +Y+  +  L +   V      +
Sbjct: 684 NLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFD 743

Query: 377 GALFVLSDMIDKHICPDHFT 396
           G L V S+M+D+ IC D  T
Sbjct: 744 GVLRVTSEMVDQGICVDFAT 763


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 221/429 (51%), Gaps = 4/429 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K       L L  +M   GI PN+V  N++IN  CQ+G + FA  +F K+ 
Sbjct: 88  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 147

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M     +P+++T   +I G C  G+++ A      ++  G   +  +Y TLI G  + G
Sbjct: 148 KMG---YVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG 204

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  AL L   +    + PN V+YN+ I  +     V  A  + S+MI K I PD  TYS
Sbjct: 205 ETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYS 264

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +  A  L N+++ E++  D Y++NIL+N  CK   +   K +   M+ +
Sbjct: 265 ALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ 324

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P+ +TY +L+DGYC    +  A  ++  M +    P++  Y+ +ING CK    D A
Sbjct: 325 GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +L +   R  ++ D +TY++LI+G   +G+I+ A  +  +M + G+      YN +++ 
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L+  +   GI P+  TY+ L+    ++   E+  ++ + +++ G + +
Sbjct: 445 LCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLN 504

Query: 638 NQTYNAIIS 646
             TY  +I 
Sbjct: 505 VDTYTIMIQ 513



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 256/527 (48%), Gaps = 21/527 (3%)

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           DDA+ L   L+  N+  P         ++E        F+ ++ +  +         + Q
Sbjct: 67  DDAVSLFNRLLRRNTTPP---------AFE--------FNKILGSLVKSKHYHTVLYLSQ 109

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K++ +G   ++   N  ++   +L  I   + ++ +++  GYV +  TF  +I  LC + 
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++++A   + +++  G   + + +  +I+  C+VG+   AL L +++    G+ V PN V
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV---DGNLVQPNVV 226

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +N II+  CK+  V  A ++   MI  GI  +V TY+ LI G+   G   +A+ L ++M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           +   + P+   +N  ++    +G ++    V   M+ + I P+  TY+ L  G C    V
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  + N + +  +  D  SY+I+IN  CK      A  L   M  + +IPD++TY +L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDG  K G I  A+Q+ + M      P +  YNSI++ LCK   +D A +LL   +  G+
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGI 466

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             +  TY+ LI G   +GK+ +A  +F  +   G  +N   Y I+I   C  G + +A  
Sbjct: 467 QPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALA 526

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           L+  M  +G IPD  TY  ++    K    +   +L  +M+  GV P
Sbjct: 527 LLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 208/426 (48%), Gaps = 4/426 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A+SL+ R+L+    P    FN I+    +       L L +KM       + PN V 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRG---IKPNLVN 122

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC+LG + FA  +   ++K G   +  T+ TLI G    G  ++A    D++V
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G   + + Y + IH L   G+   AL +L  +    + P+   Y+ +   +C+   V 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF L ++++ + +  D  +Y+ LI+  C    L  A  L + MI+  + PD+ T+  L+
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           + +CK G ++    V++ M K   KPN V YNS+++G C    ++ AKS+     + G+ 
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  +Y+ +ING+    K  EA  +F EM    I  + V Y+ LI+ L K G    A +L
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M   G+ P   TY +++    K    ++ I L   +   G+ P+  TY+ +I  L  
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482

Query: 651 EKSAED 656
               ED
Sbjct: 483 SGKLED 488



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 206/424 (48%), Gaps = 4/424 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L++     G  + A+    K+   G      ++   +  L K+ E      L + +
Sbjct: 157 TFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  NV  +N +I ++CK   + EA  L+  M+  GI P+VV ++ +I+  C +G L
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKL 276

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A+ LF KM +   +++ P+  T N ++N FCK G+++  + +   M+K GI  N  TY
Sbjct: 277 NDAIDLFNKMIL---ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTY 333

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L+DGY       +A  + + M + G+ P+   Y+  I+        + A+ +  +M  
Sbjct: 334 NSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K+I PD  TYS L  GL ++G +  A +L +Q+ +  +     +YN +++ LCK + +  
Sbjct: 394 KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDK 453

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  LL+ +  +G+ P++ TY  LI G C+ G +E A +V+E +       N+  Y  +I 
Sbjct: 454 AIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQ 513

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G C +   + A +LL   +  G + DA TY  +I   F   +   A  +  EM   G+  
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573

Query: 567 NKVG 570
            ++ 
Sbjct: 574 RQIA 577



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 161/325 (49%), Gaps = 1/325 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  +Y++    +      ++A+ L + +++R   P    +N  +  L         L++ 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M  + I P+    +IL    C+ G +  AF +  ++L+   V D  ++  LI  LC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A      ++  G   D I+YGTLI G CK G    A+ + + +     +PN+V+Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N+II+ +CK   ++ A  L       G+  D +TY+ LI+G+ I GK+ +A  +F++M  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             I  +   +NIL+N  CK G  ++ + +  +M+  GI P++VTY +L+  +       +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 622 VIELHDDMVLSGVSPDNQTYNAIIS 646
              + + M   GV+PD Q+Y+ +I+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMIN 373



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 95/202 (47%), Gaps = 18/202 (8%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL----EFLEGLLDSYEICKA----- 144
           ++S   +++     ++FD+A+ L   +   N +  +      ++GL  S  I  A     
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 145 ---------TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
                    T   +++++ A  +I   + A  ++ KLK KG   +++ ++  +  L +  
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           ++    K+++ ++  G+  NV+T+ ++I   C E    EAL+L  +M  +G  P+   + 
Sbjct: 485 KLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYE 544

Query: 256 MIINEACQVGDLEFALKLFRKM 277
           +II    +  + + A KL R+M
Sbjct: 545 IIILSLFKKDENDMAEKLLREM 566


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/494 (30%), Positives = 235/494 (47%), Gaps = 43/494 (8%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM--LKSGIWPNVVCFNMIINE 260
           +Y +M+  G   ++ T+N ++ + CK  ++++A++L   M    +G  PN V +N++IN 
Sbjct: 216 VYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVING 275

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G+LE A +L   M +    S    + T+N +I G      VE A  +   M   GI
Sbjct: 276 LARKGELEKAAQLVDIMRLSKKAS----AFTYNPLITGLLARDFVEKAGALLLEMENEGI 331

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              V TY TLIDG  + G++E A    DEM  +GL+P+ + YNS I+     G+++ AL 
Sbjct: 332 VPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALC 391

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +  D+    + P   TY+IL  G CR G ++ A +L  ++ EE  + D  +Y IL+N  C
Sbjct: 392 LFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSC 451

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
              NLA  +     M+ +GL PD   Y T I      G I  A Q+ E M       + V
Sbjct: 452 MVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTV 511

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE-------- 551
            YN +I+GLCK  SL  A  L       GL LD +TY  LI+ +   G++ E        
Sbjct: 512 TYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGM 571

Query: 552 ---------------------------AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
                                      A+  F +M   G+  N+V YN+L++ LC+ G  
Sbjct: 572 VASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRT 631

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           + A +    M+  G++P+  TYT L+    K  +    I L+ +M   G+ PD+ T+NA+
Sbjct: 632 ESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNAL 691

Query: 645 ISPLLGEKSAEDQV 658
                GE    D V
Sbjct: 692 FKG-FGEGHMYDAV 704



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 215/446 (48%), Gaps = 3/446 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           ++EM   G    V   N V+  L    + ++  ++Y  ML+ G+ P++  +N +++  C+
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G ++ A+ L + M   +    LPN VT+N +ING  + G +E A ++   +++     +
Sbjct: 242 AGRMDQAVALLKDMEARAA-GCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLSKKAS 299

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY  LI G       E+A  L  EM   G++P  V YN+ I  LF  G+ E A     
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K + PD  TY+ L  G C+ G +KQA  L   +    +     +YNILI+  C+  
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLG 419

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +L  A++L   M     +PD+ TY  L++G C   N+      ++ M     +P+   YN
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYN 479

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           + I+      ++  A  L +     G+  D +TYN LI+G    G + +A+ ++ +M   
Sbjct: 480 TRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD 539

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+ ++ V Y  LI+  C+ G   +A+ +   M+  G+ P  VTYT  +  + +  +    
Sbjct: 540 GLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLA 599

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
                 M+  GV P+  TYN ++  L
Sbjct: 600 YGWFRKMLEEGVEPNEVTYNVLMHAL 625



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 216/474 (45%), Gaps = 38/474 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++    + G  E A  ++  +++     S   +N  ++ L+  + + +  
Sbjct: 262 CLPNDVTYNVVINGLARKGELEKAAQLVDIMRLS-KKASAFTYNPLITGLLARDFVEKAG 320

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EM + G V  V T+N +I  L K    E A   +  M   G+ P+++ +N +IN  
Sbjct: 321 ALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGY 380

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G+L+ AL LF   G +    + P  +T+N +I+G+C+LG +E A  ++  M +    
Sbjct: 381 CKAGNLKQALCLF---GDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCL 437

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY  L++G     +        DEM+ +GL P+   YN+ I      G +  A  +
Sbjct: 438 PDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQL 497

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+ + I  D  TY++L  GLC+ G +K A+ L  +++ + +  D  +Y  LI+  C+
Sbjct: 498 REEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCE 557

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  AK +   M+  GL P ++TY   I  YC+ GN+  A   +  M +   +PN V 
Sbjct: 558 RGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVT 617

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YN +++ LC+                                   G+   A+  F EM  
Sbjct: 618 YNVLMHALCR----------------------------------MGRTESAYQHFHEMLE 643

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            G+  NK  Y +LI+  CK G +  A  L   M   GI PD+ T+  L   F +
Sbjct: 644 RGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE 697



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 193/414 (46%), Gaps = 38/414 (9%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           KA+   ++ L+         E A  ++ +++ +G   ++  +N  +  L K         
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            + EM + G + ++ T+N +I   CK   L++AL L+  + ++G+ P V+ +N++I+  C
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC---------------------- 300
           ++GDLE A +L  +M   + +  LP+  T+  ++NG C                      
Sbjct: 417 RLGDLEGARRLKEEM---TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473

Query: 301 -------------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
                         +G +  A ++R  M+  GI  +  TY  LIDG  + GS ++A  L 
Sbjct: 474 DCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLW 533

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            +MV  GL  + V Y   IH     G +  A  +   M+   + P   TY+I     CR 
Sbjct: 534 MKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRR 593

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +  A+    ++LEE +  +  +YN+L++ LC+     +A Q    M+ RGL+P+  TY
Sbjct: 594 GNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTY 653

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
             LIDG CK GN   A+++Y  M +    P+   +N++  G  +    DA + L
Sbjct: 654 TLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQYL 707



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 122/247 (49%), Gaps = 3/247 (1%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG      A+N  +S  + +  I   ++L +EM+  G   +  T+N++I  LCK   L++
Sbjct: 469 KGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKD 528

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L+ +M+  G+  + V +  +I+  C+ G L  A  +F  M V SG S  P+ VT+  
Sbjct: 529 AYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGM-VASGLS--PSVVTYTI 585

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            I+ +C+ G +  A      M++ G++ N  TY  L+    R G +E A +   EM++RG
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L+PN   Y   I     EG+   A+ +  +M  K I PDH T++ L KG           
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQ 705

Query: 415 KLHNQVL 421
            L N VL
Sbjct: 706 YLENVVL 712



 Score = 38.9 bits (89), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 2/100 (2%)

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +  + F EM   G+A      N ++  L     +   R +   M+  G+ P   TY TL+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 611 TRFSKNCSPEEVIELHDDM--VLSGVSPDNQTYNAIISPL 648
             F K    ++ + L  DM    +G  P++ TYN +I+ L
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGL 276


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/517 (29%), Positives = 255/517 (49%), Gaps = 24/517 (4%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           LV A +Q+   + A  V  +L+      ++ A N  L  LVK + + R W+L+ EM+  G
Sbjct: 112 LVIALSQMALPDEALSVFGRLR---ELPALPACNAILDGLVKAHMLARVWELFDEMLGRG 168

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ---VGDLE 268
            V +V T+N +I A   +  + +A  ++ +M+   I PNVV +  +I   C+   +GD E
Sbjct: 169 MVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAE 228

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
                 ++ G+       PN  T+N +++   K   ++ A    Y ++K G+  N   + 
Sbjct: 229 GLFLEMKEAGMR------PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFT 282

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLIDG  +     EA  +  +M +  + P   VYNS IH  F  G  + AL    ++I K
Sbjct: 283 TLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRK 342

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD FT SI+ +GLC  G ++ A +    + +  +  +A +YN+LI+  CKS NL  A
Sbjct: 343 GLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEA 402

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
               + M   G+ P+++TY +LIDG+ K G +E A+ +Y  M     +PN+V Y ++I+G
Sbjct: 403 LVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHG 462

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM-------R 560
             K+  +DAA  L +  +  G+  +AIT + L++G     ++ +A     E        +
Sbjct: 463 HAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEK 522

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           N  IA N V Y  LI  L   G Y +A      M   G++PD  TYT ++          
Sbjct: 523 NPSIA-NSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
             + L+ DMV  GV P   T  A++ P +  + + D 
Sbjct: 582 NAMMLYADMVKVGVKP---TKCAMVCPDIWSRESVDH 615



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 36/366 (9%)

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            ++DG  +         L DEM+ RG++P+ V YN+ I+    +GDV  A  V   M+ +
Sbjct: 143 AILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVAR 202

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            I P+  TY+ +   LC   C+  A  L  ++ E  M  + Y+YN L++   K +N+  A
Sbjct: 203 RIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHA 262

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
                 ++  GL+P+ + + TLIDG C+   I  A  ++ +M + E  P + +YNS+I+G
Sbjct: 263 LVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHG 322

Query: 509 -----------------------------------LCKDASLDAAKSLLQASQRIGL-LD 532
                                              LC    +  A   L+  Q+ G+ L+
Sbjct: 323 AFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALN 382

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           A  YN LI+ Y  +G + EA    + M  VG+  N V Y+ LI+   K G  + A  +  
Sbjct: 383 AAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYT 442

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            M+  G+ P+ VTYT L+   +KN   +    L  +M   G+  +  T + ++  L  E 
Sbjct: 443 EMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCREN 502

Query: 653 SAEDQV 658
             +D V
Sbjct: 503 RVQDAV 508


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 245/490 (50%), Gaps = 4/490 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  EGA   ++   +   S+    +N  +S  +    +    KL + M     +  V T+
Sbjct: 507 GTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTY 566

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             ++  L K  +L+EA+SL   M K G  P+VV ++ ++    +    E +L LF +M V
Sbjct: 567 TTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEM-V 625

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
             G   + +  T++ +IN  CK   V+ A ++   M + G++  +  Y TL+    +   
Sbjct: 626 RKG--CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            + AL++ +E+ +  L+P+  VYN  ++ L     V+ A  ++  M +++I PD FTY+ 
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTS 743

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GL ++G +++AF +  ++ EE    D  +Y  L++ L K   L+ A  +  +M  + 
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +PD++TY +LID   K G +E A   +EN       PN+ +Y+S+I+   K   +D A 
Sbjct: 804 CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRAL 863

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L +  QR     + +TYN L++G    G++  A  +  EM  VG   + V YNILI+ +
Sbjct: 864 ELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G   +A    K M   GI+PD +T+T+L+    K     E  EL D M   G +P  
Sbjct: 924 GKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSV 983

Query: 639 QTYNAIISPL 648
            TYN +I  L
Sbjct: 984 VTYNVLIDIL 993



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 238/465 (51%), Gaps = 4/465 (0%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            C  T   +  LV    + G  + A  ++++++ +G   S+  +++ ++   K ++     
Sbjct: 559  CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESL 618

Query: 202  KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
             L+ EMV  G V +V+T++LVI  LCK   +++AL ++ RM + G+ P +  +  +++  
Sbjct: 619  SLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678

Query: 262  CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
             +   ++FAL++F ++      S++P++  +N ++NG  K  RV+ A ++  +M    I 
Sbjct: 679  VKDEKIDFALQIFNEL---QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNIL 735

Query: 322  CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             ++ TY +L+DG  + G  EEA  +  +M + G  P+ V Y S +  L   G +  AL +
Sbjct: 736  PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795

Query: 382  LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
               M  K   PD  TYS L   L + G V++A+      + +    +   Y+ LI+   K
Sbjct: 796  FRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGK 855

Query: 442  SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
               +  A +L   M  R   P+I+TY  L+ G  K G +  A ++ E M+KV   P+LV 
Sbjct: 856  KGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915

Query: 502  YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
            YN +I+G+ K   +D A+S  +  +  G++ D IT+ +LI       K+ EA  +F  M 
Sbjct: 916  YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSME 975

Query: 561  NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
              G   + V YN+LI+ L + G   +A  +   M + G +PD +T
Sbjct: 976  EEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 271/598 (45%), Gaps = 71/598 (11%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DAL+  GN+  A      +F  G+ +    C      +  LV    + G  E A +V  +
Sbjct: 330 DALVKSGNIDEA-----CKFFNGMKNLR--CSPNVVTYTTLVNGLAKAGRLEEACEVFVE 382

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +K    S    A+N  +  L K  E      L+KEM   G V N+ T+N++I  L K  +
Sbjct: 383 MKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGR 442

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP---- 287
             EA  L++ + + G  P+V  +N +I+   + G ++  L + ++M    G+ ++     
Sbjct: 443 QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSN 502

Query: 288 ------------------------NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
                                     +T+N +++ F   G V+ A ++   M K      
Sbjct: 503 AGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPT 562

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY TL+DG  + G  +EA+ L  EM K+G  P+ V Y+S +   +     E +L +  
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQ------------------------------- 412
           +M+ K    D  TYS++   LC++  V Q                               
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682

Query: 413 ----AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A ++ N++ E  +V D + YNI++N L KSN +  A +L+ SM  + ++PD+ TY 
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQR 527
           +L+DG  K G +E A  ++  M +   +P++V Y S+++ L K   L  A  + +A +++
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
             + D +TY++LI+     G++ EA+  F    + G   N   Y+ LI+   K G   +A
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            EL + M      P+ VTY  L++  +K        +L ++M   G  PD  TYN +I
Sbjct: 863 LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 182/742 (24%), Positives = 321/742 (43%), Gaps = 134/742 (18%)

Query: 43  LRQRKW-----KILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSL--- 94
           +R+RKW     K LE++   L   LV  VV   +K   LA  F+TW G+ + +SH++   
Sbjct: 127 IRRRKWDAEMGKQLERLKFKLNPGLVCDVVVN-QKDLHLAKCFFTWAGQQDGYSHTVGTY 185

Query: 95  ----------ESSCAIVHLLVN-WR---RFDDALL--LMGNLMSANSVSP---------- 128
                     + + A+V +L   W+   R    LL  L+    S N+VS           
Sbjct: 186 TLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKS 245

Query: 129 -------------LEFLE------------GLLDSYEICKATPAVFDALVRACTQIGATE 163
                        LE L             G L  + I +     F   V +  + G  +
Sbjct: 246 FGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRI-QPDAQTFRIFVHSFNRSGRLD 304

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A + IQ++   G    +H +   +  LVK   I    K +  M +     NV T+  ++
Sbjct: 305 PAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLV 364

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
             L K  +LEEA  ++  M ++   P+ + +N +I+   + G+ + A  LF++   M   
Sbjct: 365 NGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE---MKDR 421

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            ++PN  T+N +I+   K GR   A ++ + + + G   +V TY TLID   +GG  ++ 
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481

Query: 344 LRLCDEMVKRG------------------------LMPN-------NVVYNSTIHWLFAE 372
           L +  EMV++G                          P+        + YN+ +      
Sbjct: 482 LAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHN 541

Query: 373 GDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQA------------------ 413
           G V+ A+ +L +++ KH C P   TY+ L  GL + G + +A                  
Sbjct: 542 GHVDEAVKLL-EVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVT 600

Query: 414 -----------------FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
                              L ++++ +  V D  +Y+++IN LCKS+++  A  +   M 
Sbjct: 601 YSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMK 660

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G+ P +  Y TL+    K   I+ A+Q++  +++    P+  +YN ++NGL K   +D
Sbjct: 661 EEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVD 720

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  L+ + +   +L D  TY +L++G   +G++ EAF MF++M   G   + V Y  L+
Sbjct: 721 EACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLM 780

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           + L K G    A  + + M     +PD VTY++L+    K    EE     ++ +  G +
Sbjct: 781 DVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCT 840

Query: 636 PDNQTYNAIISPLLGEKSAEDQ 657
           P+   Y+++I    G+K   D+
Sbjct: 841 PNVGVYSSLIDS-FGKKGMVDR 861



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 150/322 (46%), Gaps = 38/322 (11%)

Query: 184  WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
            +N  ++ LVK N +    KL   M +   + ++ T+  ++  L K  +LEEA +++ +M 
Sbjct: 706  YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765

Query: 244  KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
            + G  P+VV +  +++   + G L  AL +FR    M+    +P+ VT++ +I+   K G
Sbjct: 766  EEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR---AMAKKRCVPDVVTYSSLIDSLGKEG 822

Query: 304  RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            RVE A       I  G   NV  Y++LID + + G  + AL L +EM +R   PN V YN
Sbjct: 823  RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYN 882

Query: 364  STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
            + +  L   G +  A  +L +M      PD  TY+IL  G+ + G V +A     ++ E+
Sbjct: 883  NLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942

Query: 424  HMVGDA-----------------------------------YSYNILINYLCKSNNLAAA 448
             +V D                                     +YN+LI+ L ++  +  A
Sbjct: 943  GIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEA 1002

Query: 449  KQLLSSMIVRGLIPDIITYGTL 470
              +   M V+G +PD IT G +
Sbjct: 1003 AMIFHEMKVKGCMPDGITIGIM 1024



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 34/302 (11%)

Query: 135  LLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
            L+DS +     P +F   +L+    + G  E A+++  K+  +GH   + A+ + +  L 
Sbjct: 725  LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLG 784

Query: 193  KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
            K  ++     +++ M     V +V T++ +I +L KE ++EEA   +   +  G  PNV 
Sbjct: 785  KGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVG 844

Query: 253  CFNMIINEACQVGDLEFALKLFRKM-------------GVMSGDS--------------- 284
             ++ +I+   + G ++ AL+LF +M              ++SG +               
Sbjct: 845  VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904

Query: 285  ----VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
                 +P+ VT+N +I+G  K+G V+ AE     M + GI  +V T+ +LI+   +    
Sbjct: 905  EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL 964

Query: 341  EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
             EA  L D M + G  P+ V YN  I  L   G V  A  +  +M  K   PD  T  I+
Sbjct: 965  LEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024

Query: 401  TK 402
             +
Sbjct: 1025 KR 1026


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 237/483 (49%), Gaps = 8/483 (1%)

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           Q L +  H +S+ + N F S  +  N I      +  M+      +   FN ++ ++ K 
Sbjct: 16  QMLSLLAHFLSL-SHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKM 74

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV--GDLEFALKLFRKMGVMSGDSVLP 287
                 LSL ++M   GI PN+   +++IN  C +  G +  AL LF KM    G+   P
Sbjct: 75  KHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKM---IGEGFRP 131

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           + VT+  +ING CK+G    A  +  +M++     NV  Y T+ID   +     EA  L 
Sbjct: 132 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 191

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EMV +G+ P+   YNS IH L    + +    +L++M+D  I PD  +++ +   LC+ 
Sbjct: 192 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 251

Query: 408 GCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           G V +A  + +++++    + +  SYN LIN  CK   +  A  L   M  + LIPD +T
Sbjct: 252 GKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 311

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLI G C    ++ A+ ++  M    + PNLV Y  +++ LCK+  L  A +LL+A +
Sbjct: 312 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 371

Query: 527 RIGLLDAITYNTL-INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
              L   I  N + I+G    G++  A  +FS + + G+  +   Y+I+IN LC+ G   
Sbjct: 372 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 431

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A +L + M  +G   +   Y T+   F +N      I+L  +MV  G S D  T    +
Sbjct: 432 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFV 491

Query: 646 SPL 648
             L
Sbjct: 492 KML 494



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 217/458 (47%), Gaps = 7/458 (1%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           +GA     ++       S   +N  L+ + K+        L  +M S G   N+ T +++
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 223 IYALC--KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           I + C     K+ EAL L+ +M+  G  P+VV +  +IN  C+VG+   A++L   +G M
Sbjct: 103 INSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL---LGSM 159

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
              +  PN   +N II+  CK  +V  A  +   M+  GI  ++ TY +LI         
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW 219

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSI 399
           +    L +EMV   +MP+ V +N+ +  L  EG V  A  V+  MI +  C P+  +Y+ 
Sbjct: 220 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNT 279

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G C+   + +A  L  ++  + ++ D  +Y+ LI+ LC    L  A  L   M+   
Sbjct: 280 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 339

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            IP+++TY  L+D  CK   +  A+ + + ++     P++ + N  I+G+C+   L+AA+
Sbjct: 340 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 399

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L       GL  D  TY+ +ING    G + EA  +F EM   G  +N   YN +    
Sbjct: 400 DLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGF 459

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            +     +A +L++ M+  G   D  T T  V   S +
Sbjct: 460 LRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDD 497



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 186/365 (50%), Gaps = 4/365 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A  +  K+  +G    +  +   ++ L K+       +L   MV      NV  +
Sbjct: 112 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 171

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I +LCK+ ++ EA +L+  M+  GI P++  +N +I+  C + + +    L  +M  
Sbjct: 172 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM-- 229

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGG 338
                ++P+ V+ N +++  CK G+V  A ++   MI + G   NV +Y TLI+GY +  
Sbjct: 230 -VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             ++A+ L  EM ++ L+P+ V Y++ IH L     ++ A+ +  +M+     P+  TY 
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 348

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL   LC+N  + +A  L   +   ++  D    NI I+ +C++  L AA+ L S++  +
Sbjct: 349 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL PD+ TY  +I+G C+ G ++ A +++  M +     N  IYN+I  G  ++     A
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 468

Query: 519 KSLLQ 523
             LLQ
Sbjct: 469 IQLLQ 473



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 171/343 (49%), Gaps = 2/343 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+    ++G T  A  ++  +  K    ++ A+N  +  L K  ++   + L+ EM
Sbjct: 135 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 194

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G   ++ T+N +I+ALC  C+ +   +L   M+ S I P+VV FN +++  C+ G +
Sbjct: 195 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 254

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +  KM    G   +PN +++N +ING+CK+ R++ A  +   M +  +  +  TY
Sbjct: 255 TEAHDVVDKMIQRGG--CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTY 312

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +TLI G       ++A+ L  EMV    +PN V Y   + +L     +  A+ +L  +  
Sbjct: 313 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 372

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            ++ PD    +I   G+CR G ++ A  L + +  + +  D ++Y+I+IN LC+   L  
Sbjct: 373 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 432

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           A +L   M   G   +   Y T+  G+ +      A+Q+ + M
Sbjct: 433 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 172/352 (48%), Gaps = 4/352 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++ ++ +  +      A+++  ++  KG S  I  +N+ +  L  L E     
Sbjct: 164 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 223

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMIINE 260
            L  EMV    + +V +FN V+ ALCKE K+ EA  +  +M+ + G  PNV+ +N +IN 
Sbjct: 224 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLING 283

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++  ++ A+ LF   G M    ++P++VT++ +I+G C + R++ A  + + M+    
Sbjct: 284 YCKIQRIDKAMYLF---GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 340

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N+ TY  L+D   +     EA+ L   +    L P+  V N  I  +   G++E A  
Sbjct: 341 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 400

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           + S++  K + PD +TYSI+  GLCR G + +A KL  ++ E     +   YN +     
Sbjct: 401 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 460

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           ++N  + A QLL  M+ RG   D  T    +      G  +   Q+  +  K
Sbjct: 461 RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCK 512



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 8/307 (2%)

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           + +N  ++ ++H+      ++GA+   + M+     P    ++ L   + +         
Sbjct: 27  LSHNRFHSKSLHF----NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLS 82

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSN--NLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           L +Q+    +  + Y+ +ILIN  C  N   +  A  L   MI  G  PD++TYGTLI+G
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLING 142

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
            CK GN   A+++  +M +   +PN+  YN+II+ LCKD  +  A +L       G+  D
Sbjct: 143 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 202

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             TYN+LI+      +      + +EM +  I  + V +N +++ LCK G   +A +++ 
Sbjct: 203 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD 262

Query: 593 VMILHG-IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            MI  G  +P+ ++Y TL+  + K    ++ + L  +M    + PD  TY+ +I  L   
Sbjct: 263 KMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 322

Query: 652 KSAEDQV 658
           +  +D +
Sbjct: 323 ERLQDAI 329


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 265/549 (48%), Gaps = 35/549 (6%)

Query: 88  NRFSHS-LESSCAIVHLLVNW----RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEIC 142
           NR  H  +  S  I ++L++     +R +DA  L   +++   +  L     L+D Y  C
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY--C 260

Query: 143 KA------------------TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
           KA                   P++  F+ L++   + G  E A +V++++K  G      
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            ++          +      +Y+  V  G   N  T ++++ ALCKE K+E+A  +  R 
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           +  G+ PN V +N +I+  C+ GDL  A     K+  M    + P+ + +NC+I  FC+L
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGAR---MKIEAMEKQGMKPDHLAYNCLIRRFCEL 437

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +E AE+    M   G+  +V TY  LI GY R    ++   +  EM   G MPN V Y
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
            + I+ L     +  A  V  DM D+ + P    Y++L  G C  G ++ AF+   ++L+
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  +  +YN LI+ L  +  L+ A+ LL  +  +GL PD+ TY +LI GY   GN++ 
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLIN 541
            + +YE MK+   KP L  Y+ +I+ LC    ++  + L  + S +  LL    YN +++
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLL---VYNGVLH 673

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            Y ++G + +AF +  +M    I ++K  YN LI    K G   + R L+  M    + P
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733

Query: 602 DYVTYTTLV 610
           +  TY  +V
Sbjct: 734 EADTYNIIV 742



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 234/456 (51%), Gaps = 4/456 (0%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           VKL+++G+  +L+  M       +V  +N++I  LCK  ++ +A  L+  ML   + P++
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + +N +I+  C+ G+ E + K+  +M     D + P+ +T N ++ G  K G VE AE +
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERM---KADHIEPSLITFNTLLKGLFKAGMVEDAENV 306

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M   G   +  T++ L DGY+    +E AL + +  V  G+  N    +  ++ L  
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           EG +E A  +L   + K + P+   Y+ +  G CR G +  A      + ++ M  D  +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YN LI   C+   +  A++ ++ M ++G+ P + TY  LI GY +    +    + + M+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIA 550
                PN+V Y ++IN LCK + L  A+ + +  +  G+   +  YN LI+G    GKI 
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +AF    EM   GI +N V YN LI+ L   G   +A +L+  +   G+ PD  TY +L+
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +    + +  I L+++M  SG+ P  +TY+ +IS
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 224/439 (51%), Gaps = 4/439 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   + ++  L++  L K  +    ++++  +L+S   P+   +   I  A ++ D+   
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+LF +M     D + P+   +N +I+G CK  R+  AE++   M+   +  ++ TY TL
Sbjct: 199 LELFNRM---KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDGY + G+ E++ ++ + M    + P+ + +N+ +  LF  G VE A  VL +M D   
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD FT+SIL  G   N   + A  ++   ++  +  +AY+ +IL+N LCK   +  A++
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L   + +GL+P+ + Y T+IDGYC+ G++ GA    E M+K   KP+ + YN +I   C
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435

Query: 511 KDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +   ++ A+  +   +  G+  ++ TYN LI GY    +  + F +  EM + G   N V
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  LIN LCK     +A+ + + M   G+ P    Y  L+         E+      +M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555

Query: 630 VLSGVSPDNQTYNAIISPL 648
           +  G+  +  TYN +I  L
Sbjct: 556 LKKGIELNLVTYNTLIDGL 574



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 180/362 (49%), Gaps = 7/362 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+R   ++G  E A   + K+K+KG S S+  +N  +    +  E  + + + KEM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G + NV ++  +I  LCK  KL EA  +   M   G+ P V  +NM+I+  C  G +
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A +  ++M +  G  +  N VT+N +I+G    G++  AE++   + + G+  +V TY
Sbjct: 546 EDAFRFSKEM-LKKGIEL--NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI GY   G+ +  + L +EM + G+ P    Y+  I     EG +E    +  +M  
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM-- 659

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + PD   Y+ +      +G +++AF L  Q++E+ +  D  +YN LI    K   L  
Sbjct: 660 -SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            + L+  M  R + P+  TY  ++ G+C+  +   A   Y  M++     ++ I N +++
Sbjct: 719 VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778

Query: 508 GL 509
           GL
Sbjct: 779 GL 780



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 198/450 (44%), Gaps = 17/450 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           +AL   G +  A  +   E  +GL+           +++ ++    + G   GA   I+ 
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLV-------PNEVIYNTMIDGYCRKGDLVGARMKIEA 414

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           ++ +G      A+N  +    +L E+    K   +M   G   +V T+N++I    ++ +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
            ++   +   M  +G  PNVV +  +IN  C+   L  A  + R M       V P    
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM---EDRGVSPKVRI 531

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I+G C  G++E A      M+K GI+ N+ TY TLIDG +  G   EA  L  E+ 
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           ++GL P+   YNS I      G+V+  + +  +M    I P   TY +L      + C K
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-----SLCTK 646

Query: 412 QAFKLHNQVLEE-HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           +  +L  ++  E  +  D   YN +++      ++  A  L   MI + +  D  TY +L
Sbjct: 647 EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG- 529
           I G  K G +     + + M   E +P    YN I+ G C+     +A    +  Q  G 
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEM 559
           LLD    N L++G     +  EA  + SEM
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEM 796



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 8/304 (2%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG++ + +  +ST    FA      + F LS    KH     F+Y +L+  L  +  + +
Sbjct: 75  RGVLSSLLRSDSTP---FASPKELFSAFSLSSPSLKH----DFSYLLLSVLLNESKMISE 127

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  L   +  E +   + S  +L+++L K+        +  +++     P    YG  I 
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
              K  ++   ++++  MK     P++ IYN +I+GLCK   ++ A+ L        LL 
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247

Query: 533 A-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + ITYNTLI+GY   G   ++F +   M+   I  + + +N L+  L K G  + A  ++
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           K M   G +PD  T++ L   +S N   E  + +++  V SGV  +  T + +++ L  E
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367

Query: 652 KSAE 655
              E
Sbjct: 368 GKIE 371



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 34/227 (14%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           +SY +L   L +S  ++ A  L  ++   G+ P   +   L+D   K       + V+ N
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKI 549
           + + + +P+  +Y   I                QA+ ++                    +
Sbjct: 170 ILESDFRPSKFMYGKAI----------------QAAVKLS------------------DV 195

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +   +F+ M++  I  +   YN+LI+ LCK      A +L   M+   ++P  +TY TL
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  + K  +PE+  ++ + M    + P   T+N ++  L      ED
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 223/428 (52%), Gaps = 5/428 (1%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           KL+EA+++   M   G+ P+    N +++ A  +G +E A  +F +M       V P+ V
Sbjct: 169 KLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEM---CQRGVSPDCV 225

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           +   ++   C +GRV  AE    AM++ G   +  T   +ID + + G     +    +M
Sbjct: 226 SFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ GL PN + + + I+ L  +G ++ A  +L +M+ +   P+ +T++ L  GLC+ G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 411 KQAFKLHNQ-VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++AF+L  + V  +    + ++Y  +IN  CK + L  A+ LLS M  +GL+P+  TY T
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+CK GN   A ++ + M K    PN+  YN+II+GLCK  SLD A  LL      G
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D +TY  L++ +        +   F++M  VG   +   Y  LI+  C+    +++ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L +  +  G+IP   TYT+++  + +  +    ++L   M   G +PD+ TY A+IS L
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 649 LGEKSAED 656
             E   +D
Sbjct: 586 CKESKLDD 593



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 236/485 (48%), Gaps = 7/485 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V   +V    + G  + A +++ +++ +G   S    N  L   V +  +     ++ EM
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMIINEACQVGD 266
              G   +  +F L++ A C   ++ EA      M++ G I  N  C  +II+  CQ G 
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATC-TLIIDAFCQKGY 274

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +   +  F KM  M    + PN +    +ING CK G ++ A E+   M++ G   NV T
Sbjct: 275 VNRVVGYFWKMVEMG---LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYT 331

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           + TLIDG  + G +E+A RL  ++V+  G  PN   Y + I+    E  +  A  +LS M
Sbjct: 332 HTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRM 391

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            ++ + P+  TY+ L  G C+ G   +A++L + + +E    + Y+YN +I+ LCK  +L
Sbjct: 392 QEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSL 451

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +LL+ + V GL  D +TY  L+  +C+  +   ++  +  M KV   P++  Y ++
Sbjct: 452 DEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTL 511

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+  C+   +  ++ L + +  +GL+    TY ++I GY   G  + A  +F  M N G 
Sbjct: 512 ISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           A + + Y  LI+ LCK      AR L   M+  G+ P  VT  TL   + K       I 
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAIN 631

Query: 625 LHDDM 629
           + D +
Sbjct: 632 VLDRL 636



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 204/425 (48%), Gaps = 44/425 (10%)

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           +G FWK    MV  G   NV  F  +I  LCK+  +++A  L   M++ G  PNV     
Sbjct: 279 VGYFWK----MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I+  C+ G  E A +LF K+  +  D   PN  T+  +ING+CK  ++  AE +   M 
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKL--VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           + G+  N  TY TLIDG+ + G+   A  L D M K G  PN   YN+ I  L  +G ++
Sbjct: 393 EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLD 452

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +L+ +    +  D  TY+IL    CR     ++    N++L+     D +SY  LI
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +  C+   +  +++L    +  GLIP   TY ++I GYC+ GN   AV++++ M      
Sbjct: 513 STFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCA 572

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQA--------------------------SQRIGL 530
           P+ + Y ++I+GLCK++ LD A++L  A                          S  I +
Sbjct: 573 PDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV 632

Query: 531 LDAI-------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
           LD +       T NTL+      GK+  A   F ++ +    VN+V    L+ F+ K  C
Sbjct: 633 LDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRV---TLLGFMNK--C 687

Query: 584 YQQAR 588
           Y+  +
Sbjct: 688 YESNK 692



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 184/366 (50%), Gaps = 2/366 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
            C++  F + G+++ A  +   M   G+  + +T   ++D     G  E A  +  EM +
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG+ P+ V +   +      G V  A   L+ M+++    D+ T +++    C+ G V +
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
                 +++E  +  +  ++  LIN LCK  ++  A +LL  M+ RG  P++ T+ TLID
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337

Query: 473 GYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           G CK G  E A +++  + + +  KPN+  Y ++ING CK+  L+ A+ LL   Q  GL+
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            +  TY TLI+G+   G    A+ +   M   G + N   YN +I+ LCK G   +A  L
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  + +HG+  D VTYT L++   +       +   + M+  G +PD  +Y  +IS    
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCR 517

Query: 651 EKSAED 656
           +K  ++
Sbjct: 518 QKQMKE 523


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 252/518 (48%), Gaps = 19/518 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F  ++    +    + A+ V+++    G       +N F+  L K   +   +
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L K+M     +    T+  ++  L K  +L+EA+++  +M++ G  P +  + ++I+  
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK---- 317
            + G +E A ++F  M    G+   P++  +  +I G CK G+ E A    YA+ K    
Sbjct: 123 SKAGRVEEARRIFVDM---LGNGCRPDAFVYTALIKGLCKSGKPEEA----YALYKEANA 175

Query: 318 ----AGIDCNVRTYATLIDGYARGGSSEEALRLCD-EMVKRGLMPNNVVYNSTIHWLFAE 372
               A    +V TY +LIDG  + G   EA ++ D E V+RG +P+ V Y S I  L   
Sbjct: 176 RKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKL 235

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G VE       +M ++   PD  TY+ L  G  +   + +A +++ Q+L+   V    +Y
Sbjct: 236 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 295

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NI+++ LCK+  +A A     +M  RG +  ++TY  L+DG+C  GN+  AV+++  M  
Sbjct: 296 NIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD 355

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFIN-GKIA 550
              +PNLV YN II GLC+   L  A    +   QR    D  T+N  ++G       ++
Sbjct: 356 RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVS 415

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +   +F  M + G + N   Y+IL++ +C+ G  + A E+ + M+  G+ PD V + TL+
Sbjct: 416 DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLI 475

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                    +E +E+  ++     +PD  +Y +++  L
Sbjct: 476 RWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGL 512



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 259/537 (48%), Gaps = 62/537 (11%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSA----NSVSPLEFLEGLL------DSYEI-------- 141
           +++ L   +R D+A  ++   + A    + V+   F++GL       D++++        
Sbjct: 13  VINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK 72

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   + ALV    + G  + A  V++++  KG+S ++  +   +  L K   +    
Sbjct: 73  CLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEAR 132

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY----YRMLKSGIWPNVVCFNMI 257
           +++ +M+  G   +   +  +I  LCK  K EEA +LY     R   +   P+VV +  +
Sbjct: 133 RIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSL 192

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C+ G +  A ++F    V  G   +P++VT+  II+G CKLGRVE   E  + M  
Sbjct: 193 IDGLCKAGRILEARQVFDDEAVERG--FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRN 250

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF------- 370
            G + +  TYA LIDG+ +     +A R+  +M++ G + + V YN  +  L        
Sbjct: 251 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAE 310

Query: 371 ----------------------------AEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
                                       +EG+V  A+ +   M+D+   P+  +Y+I+ +
Sbjct: 311 AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIR 370

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS-NNLAAAKQLLSSMIVRGLI 461
           GLCR G + +A+    ++L+  +  D Y++N  ++ LC+  + ++   +L  SM+ +G  
Sbjct: 371 GLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTS 430

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P++ +Y  L+DG C+ G +E A++++  M      P++V++N++I  LC    +D A  +
Sbjct: 431 PNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV 490

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +  +R    DA +Y +L++G     ++ EA  +   M+  G A     Y++ + FL
Sbjct: 491 FRELERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRH--YDLTVRFL 545



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 132/267 (49%), Gaps = 6/267 (2%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD   ++++  GLCR   + +AF +  + +      D  +YN+ I+ LCK+  +  A QL
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M  +  +P  +TY  L+DG  K G ++ A+ V E M +    P L  Y  +I+GL K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM---RNVGIAV- 566
              ++ A+ +       G   DA  Y  LI G   +GK  EA+A++ E    ++   AV 
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 567 NKVGYNILINFLCKFGCYQQARELMK-VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           + V Y  LI+ LCK G   +AR++     +  G IPD VTYT+++    K    EE  E 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEK 652
             +M   G  PD  TY A+I   +  K
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAK 271



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 1/161 (0%)

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAM 555
           P++V +  +INGLC++  LD A S+L+ + R G   D +TYN  I+G     ++ +AF +
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             +M         V Y  L++ L K G   +A  +++ M+  G  P   TYT ++   SK
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               EE   +  DM+ +G  PD   Y A+I  L      E+
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEE 165


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 226/440 (51%), Gaps = 5/440 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+  MV C  + ++  F+ ++ A+ K  K +  + L+ +M   GI  N+   N+++N  C
Sbjct: 68  LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L  AL    KM  +  +   P+ VT   ++NGFC+  R+  A  +   M++ G + 
Sbjct: 128 RCSQLSLALSFLGKMMKLGHE---PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEP 184

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV  Y T+IDG  +    + AL L + M   G+ P+ V YNS I  L   G  + A  ++
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMV 244

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           S M  + I PD FT++ L     + G + +A +L+ +++   +  D  +Y++LI  LC  
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMY 304

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           + L  A+Q+   M+ +G  PD++TY  LI+GYCK   +E  ++++  M +     N V Y
Sbjct: 305 SRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +I G C+   L+ A+ + +     G+  + ITYN L++G   NGKI +A  + ++M+ 
Sbjct: 365 TVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  + V YNI+I  +CK G    A +L   + L G+ PD  TYT ++    K     E
Sbjct: 425 SGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGE 484

Query: 622 VIELHDDMVLSGVSPDNQTY 641
              L   M   G+ P N+ Y
Sbjct: 485 ADALFRKMKEDGILP-NECY 503



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 224/430 (52%), Gaps = 6/430 (1%)

Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C+  P++  F  L+ A +++   +    + +++++ G   ++   N  L+   + +++  
Sbjct: 75  CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSL 134

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
                 +M+  G+  ++ TF  ++   C+  ++ +AL ++ RM++ G  PNVV +N II+
Sbjct: 135 ALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIID 194

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+   ++ AL L  +M V   D + P++VT+N +I+G C  GR + A  +   M K  
Sbjct: 195 GLCKSKQVDNALDLLNRMEV---DGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  +V T+  LID   + G   EA  L +EM++R L P+ V Y+  I+ L     ++ A 
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   M+ K   PD  TYSIL  G C++  V+   KL  ++ +  +V +  +Y +LI   
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C++  L  A+++   M+  G+ P+IITY  L+ G C  G IE A+ +  +M+K     ++
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN II G+CK   +  A  L  +    GL  D  TY  ++ G +  G   EA A+F +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRK 491

Query: 559 MRNVGIAVNK 568
           M+  GI  N+
Sbjct: 492 MKEDGILPNE 501



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 220/416 (52%), Gaps = 4/416 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           KL+++L L++ M++    P++  F+ +++   ++   +  + L+ +M ++    +  N  
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG---IPHNLC 117

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N ++N FC+  ++  A      M+K G + ++ T+ +L++G+ RG    +AL + D M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ G  PN V+YN+ I  L     V+ AL +L+ M    I PD  TY+ L  GLC +G  
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A ++ + + +  +  D +++N LI+   K   ++ A++L   MI R L PDI+TY  L
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLL 297

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIG 529
           I G C    ++ A Q++  M      P++V Y+ +ING CK   ++    L  + SQR  
Sbjct: 298 IYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +TY  LI GY   GK+  A  +F  M   G+  N + YN+L++ LC  G  ++A  
Sbjct: 358 VRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALV 417

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           ++  M   G+  D VTY  ++    K     +  +L+  + L G++PD  TY A++
Sbjct: 418 ILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 1/224 (0%)

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NIL+N  C+ + L+ A   L  M+  G  PDI+T+G+L++G+C+G  I  A+ +++ M +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
           +  +PN+VIYN+II+GLCK   +D A  LL   +  G+  DA+TYN+LI+G   +G+  +
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  M S M    I  +   +N LI+   K G   +A EL + MI   + PD VTY+ L+ 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
                   +E  ++   MV  G  PD  TY+ +I+     K  E
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 155/327 (47%), Gaps = 1/327 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++  ++ L+   ++    +  + L ++M   G+  N    N  ++       +  AL  L
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+     PD  T+  L  G CR   +  A  + ++++E     +   YN +I+ LCKS
Sbjct: 140 GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKS 199

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  LL+ M V G+ PD +TY +LI G C  G  + A ++   M K E  P++  +
Sbjct: 200 KQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTF 259

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++I+   K+  +  A+ L +   R  L  D +TY+ LI G  +  ++ EA  MF  M +
Sbjct: 260 NALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVS 319

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   + V Y+ILIN  CK    +   +L   M   G++ + VTYT L+  + +      
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNV 379

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
             E+   MV  GV P+  TYN ++  L
Sbjct: 380 AEEIFKWMVFCGVPPNIITYNVLLHGL 406



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 1/192 (0%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +P I  +  L+    K    +  + ++E M+ +    NL   N ++N  C+ + L  A S
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            L    ++G   D +T+ +L+NG+    +I +A  MF  M  +G   N V YN +I+ LC
Sbjct: 138 FLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLC 197

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K      A +L+  M + GI PD VTY +L++    +   ++   +   M    + PD  
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257

Query: 640 TYNAIISPLLGE 651
           T+NA+I   + E
Sbjct: 258 TFNALIDACVKE 269


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 221/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++HLL   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D   Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRY 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD ITY  +I+ +CK G++    ++ + M++  + P++V
Sbjct: 363 LDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVV 417



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 154/290 (53%), Gaps = 1/290 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V + +    + P   +++ L  G  R 
Sbjct: 125 EEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 184

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L   +    +  D Y+Y++LIN LCK + +  A +L   M+ +GL+P+ +T+
Sbjct: 185 GDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 244

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLC+   L  A+ L+     
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSM 304

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ VGY  LI+ LC+ G Y  
Sbjct: 305 KGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLD 364

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           A ++++ M+  G+ PD +TYT ++  F K        +L  +M   G  P
Sbjct: 365 AEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMP 414



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 152/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 140 NILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LC+  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D ITY  +IN +   G +     +  EM+  G
Sbjct: 380 DTITYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 160/303 (52%), Gaps = 11/303 (3%)

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
           F EEI    ++ G   ++  +  L+  + + G    A  + + + K GL P+ V +N+ +
Sbjct: 123 FYEEI----LECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLM 178

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +     GD++    + + M    + PD +TYS+L  GLC+   +  A +L +++L++ +V
Sbjct: 179 NGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 238

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  ++  LI+  CK+  +  A ++   M+ + L PD+ITY TLI G C+ G+++ A  +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDL 298

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLING 542
            + M     KP+ + Y ++I+G CK+  L+ A    K ++Q + +   LD + Y  LI+G
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQ---LDDVGYTALISG 355

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G+  +A  +  EM +VG+  + + Y ++IN  CK G      +L+K M   G +P 
Sbjct: 356 LCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPS 415

Query: 603 YVT 605
            VT
Sbjct: 416 VVT 418



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 134/242 (55%), Gaps = 1/242 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ + +++   GL P ++++ TL
Sbjct: 118 KLVWGFYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LC+ G  +QAR+
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLC 357

Query: 650 GE 651
            E
Sbjct: 358 QE 359



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 1/190 (0%)

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  L+  +CK G+I  A  V+  + K   +P++V +N+++NG  +   LD    L  A  
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D  TY+ LING     K+ +A  +F EM + G+  N V +  LI+  CK G   
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A E+ K M+   + PD +TY TL+    +    ++  +L D+M + G+ PD  TY  +I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318

Query: 646 SPLLGEKSAE 655
                E   E
Sbjct: 319 DGXCKEGDLE 328



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 95/244 (38%), Gaps = 52/244 (21%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I+ LC    L+ AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
            Y + G +  A++ Y    ++ ++    +              D  + +L+       L 
Sbjct: 75  AYLESGFLRDAIECY----RLTREHKFWV------------PFDTCRKVLEH------LM 112

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            + Y  L+ G++             E+   G   +   +NIL++  CK G  + A+ +  
Sbjct: 113 KLKYFKLVWGFY------------EEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFN 160

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            +   G+ P  V++ TL+  + +    +E   L   M  SGV PD  TY+ +I+ L  E 
Sbjct: 161 AITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKES 220

Query: 653 SAED 656
             +D
Sbjct: 221 KMDD 224


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 177/690 (25%), Positives = 295/690 (42%), Gaps = 119/690 (17%)

Query: 50  ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
           +L Q    L   LV  ++S F KSP+L ++F+ W G    + H+       V++      
Sbjct: 128 VLRQFRQKLNPDLVVEILS-FLKSPELCVKFFLWAGRQIGYDHT-----PAVYI------ 175

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLL-DSYEICKATPAVFDALVRACTQIGATEGAYDV 168
              ALL +    S + V P EFL  +  D  E+      + + L+R C + G    A + 
Sbjct: 176 ---ALLDVFERGSYDRV-PEEFLREIRGDDKEVLGK---LLNVLIRKCCRNGLWNVALEE 228

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG----------------- 211
           + +LK  G+  +   +N  +   ++ +++     +++EM   G                 
Sbjct: 229 LGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK 288

Query: 212 ---------------YVENVNTFNLVIYALCKECKLEEALSLYYRM-------------- 242
                          +V N   +N +I  LC+    EEA+    RM              
Sbjct: 289 VGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI 348

Query: 243 ---------------------LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
                                +  G +P+   FN +++  C+  D  +A KL +KM    
Sbjct: 349 LLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM---E 405

Query: 282 GDSVLPNSVTHNCIINGFCKLGRV------EFAEEIRYAMIKAGI---DCNVRTYATLID 332
                P  V +N +I   C  G +      E AE+    M+ AG      NV ++A  + 
Sbjct: 406 KCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLC 465

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+   G  E+A ++  EM+  G +P+   Y+  I +L     VE A F+  +M    + P
Sbjct: 466 GF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D +TY+IL     + G +KQA    ++++ +       +Y  LI+   K+  ++ A +L 
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK----------------KVEKK 496
             MI +G  P++ITY  LIDGYCK GNIE A Q+Y  M+                 V +K
Sbjct: 583 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 642

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAM 555
           PN+V Y ++++GLCK   +  A+ LL+     G   + I Y+ LI+G+    K+ EA  +
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F +M   G   N   Y+ LI+ L K        +++  M+ +   P+ V YT ++   SK
Sbjct: 703 FHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
               +E  +L   M   G  P+  TY A+I
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 238/528 (45%), Gaps = 26/528 (4%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           +  R     G  E AY VI ++   G       ++  +  L   + +   + L+KEM   
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G V +V T+ ++I    K   +++A +    M++ G  P VV +  +I+   +   +  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC-------- 322
            +LF    +M      PN +T+  +I+G+CK G +E A +I YA ++   D         
Sbjct: 579 NELFE---LMIAKGCFPNVITYTALIDGYCKSGNIEKACQI-YARMRGDADIPDVDMYFK 634

Query: 323 ---------NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
                    NV TY  L+DG  +    ++A  L + M   G  PN +VY++ I       
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A  V   M+++   P+ +TYS L   L ++  +    K+ +++LE     +   Y 
Sbjct: 695 KLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +I+ L K      A +L+  M  +G  P+++TY  +IDG+ K G ++  ++++  M   
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEA 552
              PN V Y  +IN  C    LD A +LL+  ++      ++ Y  +I GY    +   +
Sbjct: 815 GCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILS 872

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI--IPDYVTYTTLV 610
             +  E+   G A   + Y +LI+   K G  + A EL K +I   +        YT+L+
Sbjct: 873 LGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLI 932

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             FS     +   EL  DM+  GV PD  T+  ++  L+  +  E+ +
Sbjct: 933 YSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEAL 980



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 167/409 (40%), Gaps = 54/409 (13%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N++I + C+ G    AL+   ++G +      P  +T+N ++  F +  +++ A+ +  
Sbjct: 209 LNVLIRKCCRNGLWNVALE---ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHR 265

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M + G+  +  T         + G   EAL L +   K   +PN ++YN  I       
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMI------- 315

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
                                        GLC     ++A    N++     + +  +Y 
Sbjct: 316 ----------------------------SGLCEASFFEEAMDFLNRMRSTSCIPNVQTYR 347

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           IL+        L   K++LS MI  G  P    + +L+  YCK  +   A ++ + M+K 
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407

Query: 494 EKKPNLVIYNSIINGLCKDASL----------DAAKSLLQASQRIGLLDAITYNTLINGY 543
           E KP  V+YN +I  +C    L           A   +L A   +  ++ +++   + G+
Sbjct: 408 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              GK  +A+ +  EM   G   +   Y+ +I FLC     + A  L K M   G++PD 
Sbjct: 468 ---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            TYT L+  FSK    ++     D+MV  G  P   TY  +I   L  K
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAK 573



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 163/351 (46%), Gaps = 9/351 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     + ALV    +    + A D+++ + V G   +   ++  +    K  ++    +
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +MV  GY  NV T++ +I  L K+ +L+  L +  +ML++   PN+V +  +I+   
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +V   + A KL   M +M      PN VT+  +I+GF K G+V+   E+   M   G   
Sbjct: 762 KVAKTDEAYKL---MLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV-VYNSTIHWLFAEGDVEGALFV 381
           N  TY  LI+     G  +EA  L +EM K+   P +V  Y   I     E  +  +L +
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEM-KQTYWPKHVSSYCKVIEGYKREFIL--SLGL 875

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS--YNILINYL 439
           L ++      P    Y +L     + G ++ A +LH +V+   M   A    Y  LI   
Sbjct: 876 LEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSF 935

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
             ++ +  A +L   MI  G+IPD+ T+  L+ G  +    E A+Q+ +++
Sbjct: 936 SYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 229/477 (48%), Gaps = 40/477 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   F  ++ A    G    A ++   +K  GH  ++  +N  ++  VK  +IG+  
Sbjct: 215 CTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQAN 274

Query: 202 KLYKEMVSCGYVENVNTFNLVIYA-----------------------------------L 226
            LY+EM S     +  TFN+++                                     L
Sbjct: 275 MLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGL 334

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C    L+EA+     ML+ GI P VV FN II    + G  E A K +R   +M    + 
Sbjct: 335 CWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYR---MMVKFGLF 391

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+S+T + +I G  KL R++ A ++ Y MI  G+  N   +  L+DGY R G    A  L
Sbjct: 392 PSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSL 451

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EM  RG+ P+ V +++ I+ L   G V+ A  V   M  K   P++F Y+ L +G C 
Sbjct: 452 WNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCN 511

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +G +++A  L  ++  + ++ D ++ NI+IN LCK   + +A  +  +M   GLIPDI+T
Sbjct: 512 SGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVT 571

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDGYCK  +     +V   M      P++  YN  ++GLC    +  A  +L+   
Sbjct: 572 YNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELI 631

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             G++ D +TYNT++NG   +  +  A  + +++  +    N V  N+L++  CK G
Sbjct: 632 SAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQG 687



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 244/532 (45%), Gaps = 39/532 (7%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +V D L+R   ++     A +++ +++  G   S  A       L+++ + G  WKL + 
Sbjct: 80  SVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRG 139

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G       FN VI   C++  ++   SL   M K    P+V  +N++IN  C  G 
Sbjct: 140 MIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQ 199

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              AL   R    M  +   P+ VT   +IN FC  G +  A  +   M +AG   NV  
Sbjct: 200 TFDALGWMR---FMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVC 256

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI--HWLFAE------------ 372
           Y TL++GY +     +A  L +EM  + + P+   +N  +  H+ +              
Sbjct: 257 YNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLS 316

Query: 373 ---------------------GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
                                G ++ A+  L DM++K I P    ++ +     R G  +
Sbjct: 317 QSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEE 376

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A+K +  +++  +   + + + LI  L K   L  A+ LL  MIV GL  +   +  L+
Sbjct: 377 KAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLL 436

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL-LQASQRIGL 530
           DGY + G++ GA  ++  M+     P+ V +++ INGL     +D A  + LQ S++  +
Sbjct: 437 DGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFM 496

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            +   YN+LI G+  +G++ EA  +  EM   G+  +    NI+IN LCK G  + A ++
Sbjct: 497 PNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDV 556

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
            + M   G+IPD VTY TL+  + K        E+ + M  +G  PD  TYN
Sbjct: 557 FRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYN 608



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 168/416 (40%), Gaps = 39/416 (9%)

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EAL +  RM + G+ P+     ++     ++GD     KL R M +  G    P +   N
Sbjct: 97  EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGM-IHQGPR--PCNRNFN 153

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I GFC+ G V+  E +   M K    C    YA                         
Sbjct: 154 AVILGFCRKGHVKVGESLLCVMQK--FKCQPDVYA------------------------- 186

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
                   YN  I+     G    AL  +  MID    P   T+  +    C  G + +A
Sbjct: 187 --------YNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEA 238

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L + + E   + +   YN L+N   K+ ++  A  L   M  + + PD  T+  L+ G
Sbjct: 239 RNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAG 298

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
           + + G  E   ++  ++ +        +YN  ++GLC    LD A   L+     G+   
Sbjct: 299 HYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPT 358

Query: 534 -ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            + +N++I  Y   G   +A+  +  M   G+  + +  + LI  L K    Q+AR+L+ 
Sbjct: 359 VVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLY 418

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            MI+ G+  +   +T L+  + +         L ++M   G+ PD   ++A I+ L
Sbjct: 419 EMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGL 474



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 153/355 (43%), Gaps = 1/355 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           + ++ GF K+     A EI   M + G+  +      L     R G      +L   M+ 
Sbjct: 83  DTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIH 142

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +G  P N  +N+ I     +G V+    +L  M      PD + Y+IL    C  G    
Sbjct: 143 QGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFD 202

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A      +++        ++  +IN  C   N+  A+ L   M   G IP+++ Y TL++
Sbjct: 203 ALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMN 262

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLL 531
           GY K  +I  A  +YE MK     P+   +N ++ G  +    +    LL+  SQ   L 
Sbjct: 263 GYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLS 322

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
            +  YN  ++G    G + EA     +M   GI    V +N +I    + G  ++A +  
Sbjct: 323 ISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAY 382

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           ++M+  G+ P  +T ++L+   SK    +E  +L  +M++ G+  +   +  ++ 
Sbjct: 383 RMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLD 437



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 11/312 (3%)

Query: 348 DEMVKRGLMPNNVV--------YNSTIHWLFAEGDVEGALFVLSDMIDKH--ICPDHFTY 397
           DEMVK   +  +V+            + W+     V+ +  V+  M  +H     D    
Sbjct: 23  DEMVKSSCVAAHVLGAQNLKFLAQDVVSWVIRRVGVDRSREVVEFMWKRHAEFESDFSVL 82

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
             L +G  +     +A ++  ++ E  +   + +  IL   L +  +  +  +LL  MI 
Sbjct: 83  DTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIH 142

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC-KDASLD 516
           +G  P    +  +I G+C+ G+++    +   M+K + +P++  YN +IN  C +  + D
Sbjct: 143 QGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFD 202

Query: 517 AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A   +            +T+ T+IN +   G + EA  +F  M+  G   N V YN L+N
Sbjct: 203 ALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMN 262

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
              K     QA  L + M    + PD  T+  LV    +    E+   L  D+  SG   
Sbjct: 263 GYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLS 322

Query: 637 DNQTYNAIISPL 648
            +  YN  +S L
Sbjct: 323 ISSLYNICVSGL 334



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 1/115 (0%)

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           +V+ K+   G    I  +N  L  L    ++ R   + +E++S G V +  T+N V+  +
Sbjct: 590 EVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGV 649

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           C +  LE A+ +  ++LK    PNVV  N++++  C+ G  E  +   +K+  +S
Sbjct: 650 CTDV-LERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEIS 703


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 170/644 (26%), Positives = 292/644 (45%), Gaps = 79/644 (12%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTW---VG---ENNRFSHSLESSCAIVHLLVNWR 108
           A  L  SL NR++ E   S K+A   +T+   +G      R  H   +   I  L   WR
Sbjct: 69  ASELVVSLFNRMIREC--SIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLI--LKTGWR 124

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
             D  +               + L+GL D+  + +AT    D L+R   + G T   +  
Sbjct: 125 VNDTVIFS-------------QLLKGLCDAKRVDEAT----DILLRRMPEFGCTPDVF-- 165

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
                   +S+ +  + N      +  E      +  +     +  NV T+  VI  LCK
Sbjct: 166 -------SYSILLKGFCN----EKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
              ++ A  ++  M+  G+ PN   +  +I+    +G  +  +++ ++M   S   + P+
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM---STHGLQPD 271

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS--------- 339
              +  +++  CK GR   A  I  ++I+ GI  NV  Y  L+ GYA  GS         
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331

Query: 340 --------------------------SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
                                      +EA+ + D+M ++ L PN V Y + I  L   G
Sbjct: 332 LMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLG 391

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            V+ A+   + MID+ + PD F +S L  GLC     ++A +L  +VL++ +  D   +N
Sbjct: 392 RVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFN 451

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            L+  LC+   +  A++L+  M+  G+ PD+I+Y TL+DG+C  G I+ A ++ + +  +
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
             KP+ V YN++++G CK   +D A SL +     GL  D +TYNT+++G F  G+ +EA
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             ++  M N    +N   YNI+IN LCK     +A ++   +    +  D  T   ++  
Sbjct: 572 KELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGA 631

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             K    E+ ++L   +   G+ PD +TY  I   L+ E S E+
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 675



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 261/543 (48%), Gaps = 7/543 (1%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYD 167
           F  ++LL G      +   LE L  + D  +    TP V  +  ++    +    + A  
Sbjct: 165 FSYSILLKGFCNEKRAEEALELLSMMADDGD-GSHTPNVVTYTTVIDGLCKAQMVDRAKG 223

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           V Q +  KG   + H +   +   + + +     ++ +EM + G   +   + +++  LC
Sbjct: 224 VFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLC 283

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K  +  EA +++  +++ GI PNV  + ++++     G L    ++   + +M G+ V P
Sbjct: 284 KNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLS---EMHSFLDLMVGNGVSP 340

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +    N +   + K   ++ A  I   M +  +  N+ TY  LID   + G  ++A+   
Sbjct: 341 DHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKF 400

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           ++M+  G+ P+  V++S ++ L      E A  +  +++D+ I  D   ++ L   LCR 
Sbjct: 401 NQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCRE 460

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V +A +L + +L   +  D  SYN L++  C +  +  A +LL  ++  GL PD +TY
Sbjct: 461 GRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTY 520

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL-LQASQ 526
            TL+ GYCK   I+ A  ++  M      P++V YN+I++GL +      AK L L    
Sbjct: 521 NTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMIN 580

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
               ++  TYN +ING   N  + EAF MF  + +  + ++    NI+I  L K G  + 
Sbjct: 581 SRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKED 640

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +L   +  +G++PD  TY  +     K  S EE+ EL   M  +G +P+++  NA++ 
Sbjct: 641 AMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVR 700

Query: 647 PLL 649
            LL
Sbjct: 701 WLL 703



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 212/426 (49%), Gaps = 20/426 (4%)

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           +LM  N VSP        D +        +F+ +  A  +    + A  +  K++ +  S
Sbjct: 331 DLMVGNGVSP--------DHH--------IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLS 374

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
            +I  +   +  L KL  +      + +M+  G   ++  F+ ++Y LC   K E+A  L
Sbjct: 375 PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEEL 434

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           ++ +L  GI  + V FN ++   C+ G +  A +L   + +M    V P+ +++N +++G
Sbjct: 435 FFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRL---IDLMLRVGVRPDVISYNTLVDG 491

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            C  GR++ A ++   ++  G+  +  TY TL+ GY +    ++A  L  EM+ +GL P+
Sbjct: 492 HCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPD 551

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V YN+ +H LF  G    A  +   MI+     + +TY+I+  GLC+N  V +AFK+ +
Sbjct: 552 VVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFH 611

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            +  + +  D ++ NI+I  L K      A  L +++   GL+PD+ TY  + +   K G
Sbjct: 612 SLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 671

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYN 537
           ++E   +++  M++    PN  + N+++  L     ++ A + L +  ++   L+A T +
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTS 731

Query: 538 TLINGY 543
            LI+ Y
Sbjct: 732 MLISIY 737



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 154/364 (42%), Gaps = 47/364 (12%)

Query: 342 EALRLCDEMVKRGLMPNNVVYN---STIHWLFAEGDVEGALFVLSDMIDK---HICPDHF 395
           +AL+L DEM+      +   +N   + +         E  + + + MI +    + P  F
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSF 93

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQ-LLS 453
           TY+IL    CR G +K  F     +L+    V D   ++ L+  LC +  +  A   LL 
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLR 153

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV---EKKPNLVIYNSIINGLC 510
            M   G  PD+ +Y  L+ G+C     E A+++   M         PN+V Y ++I+GLC
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   +D AK + Q     G+  +  TY  LI+GY   GK  E   M  EM   G+  +  
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCY 273

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y +L+++LCK G   +AR +   +I  GI P+   Y  L+  ++   S  E+    D M
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333

Query: 630 VLSGVSPDNQ-----------------------------------TYNAIISPLLGEKSA 654
           V +GVSPD+                                    TY A+I  L      
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRV 393

Query: 655 EDQV 658
           +D V
Sbjct: 394 DDAV 397



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/392 (22%), Positives = 177/392 (45%), Gaps = 20/392 (5%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
              R S ++ +  A++  L    R DDA+L   N M    ++P  F              
Sbjct: 369 RQQRLSPNIVTYGALIDALCKLGRVDDAVLKF-NQMIDEGMTPDIF-------------- 413

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF +LV     +   E A ++  ++  +G  +    +N  + +L +   +    +L  
Sbjct: 414 --VFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLID 471

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            M+  G   +V ++N ++   C   +++EA  L   ++  G+ P+ V +N +++  C+  
Sbjct: 472 LMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKAR 531

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            ++ A  LFR+M +M G  + P+ VT+N I++G  + GR   A+E+  +MI +    N+ 
Sbjct: 532 RIDDAYSLFREM-LMKG--LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  +I+G  +    +EA ++   +  + L  +    N  I  L   G  E A+ + + +
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATI 648

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD  TY ++ + L + G +++  +L + + E     ++   N L+ +L    ++
Sbjct: 649 SAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDI 708

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             A   LS +  +    +  T   LI  Y +G
Sbjct: 709 NRAGAYLSKLDEKNFSLEASTTSMLISIYSRG 740


>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 263/534 (49%), Gaps = 8/534 (1%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           ++++ P L +  +++++   + +   AL F+ WV  +     S  + C I+H+L   R+F
Sbjct: 93  IKELIPHLGHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQF 152

Query: 111 DDALLLMGNL--MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
             A+  +  L  +S +  S  +  + L+   E C   P +F+ L++A  ++     +Y  
Sbjct: 153 PLAMKFLSELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWS 212

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
            +K+   G   ++ A N  L+ L K+    + W+LY+EM   G   N  TFN++ Y LC+
Sbjct: 213 FKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCR 272

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           +  + +      +M + G  P+VV +N +I+   + G LE A  L++   +M    V+P+
Sbjct: 273 DGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYK---IMYRRGVMPD 329

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            V++  ++ G C+LGRV  A ++ + MI  G+D +V  Y TLI  Y + G  +EA  L  
Sbjct: 330 LVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLH 389

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM+  G+ P++      +     EG +  AL ++ ++    +   H  Y  L   LCR  
Sbjct: 390 EMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCRED 449

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A  L  ++LE+    D+  YN LI   C+SNN++ A  L   MI R   P   TY 
Sbjct: 450 RPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYK 509

Query: 469 TLIDGYCK-GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQ 526
           +LI   C+   +++G   + E M + E  P+  I  +++NG CK+ + D A+SLL + +Q
Sbjct: 510 SLIHCMCEINRSVDGEGLMVE-MVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQ 568

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                D+ ++N+L+  Y   G   +   +   M   G   N +    +I+ + K
Sbjct: 569 DFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWK 622



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 183/397 (46%), Gaps = 4/397 (1%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N V F M+I    ++  +  +   F+KM  +     +PN +  NCI+NG  K+       
Sbjct: 189 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLG---FVPNVIACNCILNGLAKMKSDAQCW 245

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E+   M + G+  N  T+  L     R G   +     ++M + G  P+ V YN+ I   
Sbjct: 246 ELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSY 305

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G +E A ++   M  + + PD  +Y+ L +GLCR G V++A +L +++++  M  D 
Sbjct: 306 VRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDV 365

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             YN LI   CK   L  A+ LL  MI  G+ PD  T   L++GY + G +  A+ +   
Sbjct: 366 VLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVE 425

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           ++K+       IY  +I  LC++    AAKSLL+         D+  YN LI  +  +  
Sbjct: 426 IQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNN 485

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           ++EA  +  EM N         Y  LI+ +C+         LM  M+   +IPD+     
Sbjct: 486 VSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRA 545

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           LV  + K  + ++   L           D++++N+++
Sbjct: 546 LVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLV 582



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 9/284 (3%)

Query: 374 DVEGALFVLSDMIDKHICPDH-----FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           DV  +  V  +++   +C +H       + +L K   +   + +++    ++++   V +
Sbjct: 168 DVSSSEDVFQNLV---LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPN 224

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             + N ++N L K  + A   +L   M   G+  +  T+  L    C+ G++       E
Sbjct: 225 VIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLE 284

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M++    P++V YN++I+   +   L+ A  L +   R G++ D ++Y +L+ G    G
Sbjct: 285 KMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLG 344

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ EA  +F  M + G+  + V YN LI   CK G  Q+AR L+  MI  GI PD  T  
Sbjct: 345 RVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCR 404

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            LV  + +       + L  ++   GV+  +  Y  +I  L  E
Sbjct: 405 ILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCRE 448



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 142/380 (37%), Gaps = 69/380 (18%)

Query: 132 LEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           + G L+  E     P V  ++ L+ +  + G  E A+ + + +  +G    + ++ + + 
Sbjct: 279 INGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMR 338

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L +L  +    +L+  M+  G   +V  +N +I A CK+  L+EA SL + M+  GI P
Sbjct: 339 GLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHP 398

Query: 250 NVVCFNMIINEACQVGDLEFALKL---FRKMGVMSG------------------------ 282
           +     +++    + G L  AL L    +K+GV                           
Sbjct: 399 DSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLL 458

Query: 283 -----DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                DS  P+S  +N +I  FC+   V  A  ++  MI         TY +LI      
Sbjct: 459 ERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEI 518

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
             S +   L  EMV+  ++P                             D  IC      
Sbjct: 519 NRSVDGEGLMVEMVESEVIP-----------------------------DHEIC------ 543

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
             L  G C+ G   +A  L     ++    D+ S+N L+       N     +L   M+ 
Sbjct: 544 RALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLK 603

Query: 458 RGLIPDIITYGTLIDGYCKG 477
            G +P+ +T   +I G  K 
Sbjct: 604 AGFLPNSLTCRYIIHGIWKS 623



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 51/125 (40%)

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + + +  LI  Y     I E++  F +M  +G   N +  N ++N L K     Q  EL 
Sbjct: 189 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 248

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + M   G+  +  T+  L     ++    ++    + M   G  PD  TYN +I   +  
Sbjct: 249 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 308

Query: 652 KSAED 656
              ED
Sbjct: 309 GRLED 313


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 258/556 (46%), Gaps = 14/556 (2%)

Query: 2   FSAFCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNS 61
           F +    L  + +P S        +  P++       I   + ++ W  L+ +      S
Sbjct: 18  FPSLDPKLNNTKTPFSSP---NSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPS 74

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
            + + +      P L L ++ W  +     H++E  C ++HLL N + ++    L+ +  
Sbjct: 75  SLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFA 134

Query: 122 SANSVSPLEFLEGL--LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
                S       L  L S+    A   + D LV A  + G  + A +   +    G  +
Sbjct: 135 KNAHYSNSTIFHSLSVLGSWGC--ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRL 192

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S  + N  L  LVK   IG    +YKEM+      NV TF++VI  LCK  K ++A  + 
Sbjct: 193 SALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV 252

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M   G  P+V+ +N II+  C+ G +  A  L ++   M    + PN +T N +I+GF
Sbjct: 253 EDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE---MVAKRIHPNEITFNILIDGF 309

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C+   V  A+++   M + G+  NV TY +LI+G    G  +EAL L D+M   GL PN 
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V YN+ I+    +  ++ A  +L D+  + + P+  T++ L     + G +  AF L + 
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +L+  +  +  +YN LI   C+  N+  A++L   M   GL  D++TY  L+D  CK G 
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489

Query: 480 IEGAVQVYENMKKVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
              AV++ + M  +EKK    N+V YN +I G C    L+ A  LL      GL+ +  T
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549

Query: 536 YNTLINGYFINGKIAE 551
           Y+ L +     G I +
Sbjct: 550 YDILRDEMMEKGFIPD 565



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 160/320 (50%), Gaps = 1/320 (0%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+  Y + G  + AL   D     G   + +  N  +  L  EG +     V  +MI + 
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I  +  T+ ++  GLC+ G  ++A  +   +          +YN +I+  CK+  +  A 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            LL  M+ + + P+ IT+  LIDG+C+  N+  A +V+E M++   +PN+V YNS+INGL
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C +  LD A  L      +GL  + +TYN LING+     + EA  M  ++   G+A N 
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           + +N LI+   K G    A  L  +M+  G+ P+  TY  L+  F +  + +E  +L  +
Sbjct: 405 ITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464

Query: 629 MVLSGVSPDNQTYNAIISPL 648
           M  +G+  D  TYN ++  L
Sbjct: 465 MEGNGLKADLVTYNILVDAL 484



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 1/178 (0%)

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-I 534
           K G I     VY+ M +     N+V ++ +INGLCK      A  +++  +  G   + I
Sbjct: 206 KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI 265

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYNT+I+GY   GK+ +A A+  EM    I  N++ +NILI+  C+      A+++ + M
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEM 325

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
              G+ P+ VTY +L+     N   +E + L D M   G+ P+  TYNA+I+    +K
Sbjct: 326 QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 115/237 (48%), Gaps = 20/237 (8%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GL D        P V  ++AL+    +    + A +++  +  +G + ++  +N  +   
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K   +   + L   M+  G   NV+T+N +I   C+E  ++EA  L   M  +G+  ++
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           V +N++++  C+ G+   A++L  +M +M       N VT+N +I GFC  G++E A  +
Sbjct: 475 VTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 534

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP--NNVVYNSTI 366
              M++ G+  N  TY              + LR  DEM+++G +P  +  +YN +I
Sbjct: 535 LNEMLEKGLIPNRTTY--------------DILR--DEMMEKGFIPDIDGHLYNVSI 575



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 42/153 (27%)

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIG----LLDAITYNTLINGYFINGKIAEAF 553
           N +I + ++    K+  +D A   L+   R G     L A++ N ++      G+I    
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLA---LEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVE 214

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
           +++ EM    I VN V ++++IN LCK G +Q+A +++                      
Sbjct: 215 SVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVV---------------------- 252

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
                        +DM   G SP   TYN II 
Sbjct: 253 -------------EDMKAWGFSPSVITYNTIID 272


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 236/473 (49%), Gaps = 11/473 (2%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKL------YKEMVSCGYVENVNTFNLVIYALCKE 229
           G   S  A++N   +   L    RF KL      +  MV C  + ++  F+ ++ A+ K 
Sbjct: 35  GFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            K +  + L+ +M   GI  N+   N+++N  C+   L  AL    KM  +  +   P+ 
Sbjct: 95  KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE---PSI 151

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT   ++NGFC+  RV  A  +   M+  G   NV  Y T+IDG  +    + AL L + 
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M K G+ P+ V YNS I  L + G    A  ++S M  + I PD FT++ L     + G 
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V +A + + +++   +  D  +Y++LI  LC  + L  A+++   M+ +G  PD++TY  
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+GYCK   +E  ++++  M +     N V Y  +I G C+   L+ A+ + +     G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  + ITYN L++G   NGKI +A  + ++M+  G+  + V YNI+I  +CK G    A 
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           ++   +   G++PD  TYTT++    K     E   L   M   G+ P N+ Y
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP-NECY 503



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 221/430 (51%), Gaps = 6/430 (1%)

Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C+  P++  F  L+ A +++   +    + +++++ G   ++   N  L+   + +++  
Sbjct: 75  CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSL 134

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
                 +M+  G+  ++ TF  ++   C+  ++ +AL ++ +M+  G  PNVV +N II+
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+   ++ AL L  +   M  D + P+ VT+N +I+G C  GR   A  +   M K  
Sbjct: 195 GLCKSKQVDNALDLLNR---MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  +V T+  LID   + G   EA    +EM++R L P+ V Y+  I+ L     ++ A 
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   M+ K   PD  TYSIL  G C++  V+   KL  ++ +  +V +  +Y ILI   
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C++  L  A+++   M+  G+ P+IITY  L+ G C  G IE A+ +  +M+K     ++
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN II G+CK   +  A  +  +    GL+ D  TY T++ G +  G   EA A+F +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491

Query: 559 MRNVGIAVNK 568
           M+  GI  N+
Sbjct: 492 MKEDGILPNE 501



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 217/416 (52%), Gaps = 4/416 (0%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           KL+++L L++ M++    P++  F+ +++   ++   +  + L+ +M ++    +  N  
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG---IPHNLC 117

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N ++N FC+  ++  A      MIK G + ++ T+ +L++G+ RG    +AL + D+M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V  G  PN V+YN+ I  L     V+ AL +L+ M    I PD  TY+ L  GLC +G  
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             A ++ + + +  +  D +++N LI+   K   ++ A++    MI R L PDI+TY  L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIG 529
           I G C    ++ A +++  M      P++V Y+ +ING CK   ++    L  + SQR  
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +TY  LI GY   GK+  A  +F  M   G+  N + YN+L++ LC  G  ++A  
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           ++  M  +G+  D VTY  ++    K     +  +++  +   G+ PD  TY  ++
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 1/224 (0%)

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NIL+N  C+ + L+ A   L  MI  G  P I+T+G+L++G+C+G  +  A+ +++ M  
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
           +  KPN+VIYN+II+GLCK   +D A  LL   ++ G+  D +TYN+LI+G   +G+ ++
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  M S M    I  +   +N LI+   K G   +A E  + MI   + PD VTY+ L+ 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
                   +E  E+   MV  G  PD  TY+ +I+     K  E
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 1/327 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++  ++ L+   ++    +  + L ++M   G+  N    N  ++       +  AL  L
Sbjct: 80  SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             MI     P   T+  L  G CR   V  A  + +Q++      +   YN +I+ LCKS
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  LL+ M   G+ PD++TY +LI G C  G    A ++   M K E  P++  +
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++I+   K+  +  A+   +   R  L  D +TY+ LI G  +  ++ EA  MF  M +
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   + V Y+ILIN  CK    +   +L   M   G++ + VTYT L+  + +      
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
             E+   MV  GV P+  TYN ++  L
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGL 406



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 58/347 (16%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPL-----EFLEGLLDSYEICKATPAV----- 148
            I+  L   ++ D+AL L+ N M  + + P        + GL  S     AT  V     
Sbjct: 191 TIIDGLCKSKQVDNALDLL-NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249

Query: 149 ---------FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
                    F+AL+ AC + G    A +                                
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEE-------------------------------- 277

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
               Y+EM+      ++ T++L+IY LC   +L+EA  ++  M+  G +P+VV ++++IN
Sbjct: 278 ---FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+   +E  +KLF +   MS   V+ N+VT+  +I G+C+ G++  AEEI   M+  G
Sbjct: 335 GYCKSKKVEHGMKLFCE---MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N+ TY  L+ G    G  E+AL +  +M K G+  + V YN  I  +   G+V  A 
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
            +   +  + + PD +TY+ +  GL + G  ++A  L  ++ E+ ++
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 1/192 (0%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           +P I  +  L+    K    +  + ++E M+ +    NL   N ++N  C+ + L  A S
Sbjct: 78  LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137

Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            L    ++G   +I T+ +L+NG+    ++ +A  MF +M  +G   N V YN +I+ LC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K      A +L+  M   GI PD VTY +L++    +    +   +   M    + PD  
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257

Query: 640 TYNAIISPLLGE 651
           T+NA+I   + E
Sbjct: 258 TFNALIDACVKE 269



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 3/147 (2%)

Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
           D SLD    ++Q      + D   ++ L++      K      ++ +M+ +GI  N    
Sbjct: 63  DDSLDLFFHMVQCRPLPSIAD---FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           NIL+N  C+      A   +  MI  G  P  VT+ +L+  F +     + + + D MV 
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179

Query: 632 SGVSPDNQTYNAIISPLLGEKSAEDQV 658
            G  P+   YN II  L   K  ++ +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNAL 206


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 227/434 (52%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   + F +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L +L+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+ V +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++G L+     FR    M    V P+  T++ +ING  K  +++ A+E+   
Sbjct: 181 NTLMNGYIRLGVLDEG---FRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ DM  K + PD  TY+ L  G C+ G +  AF+   ++++E++  D   Y  
Sbjct: 298 LKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +  +Y TL++GY R G  +E  RL   M+ 
Sbjct: 146 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLA 205

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 206 SGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M  +GL PD ITY TLID
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLID 325

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G CK G+++ A +  + M +   + + V+Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 326 GCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNP 385

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 386 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN L K + +  A +L   M+V+GL+P+ +T+
Sbjct: 191 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+    R
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P  ++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G ++   ++   M     +P++  Y+ +INGL K++ +D A  L       GL
Sbjct: 184 MNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 244 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M   G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSVD 370



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ YL K           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P+ V YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+ +A  +F EM   G+  N V +
Sbjct: 191 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    K    ++  +L DDM  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 310

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 311 KGLKPDKITYTTLI 324


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 237/481 (49%), Gaps = 8/481 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    AY V +   V         +   +    K  +I +   L  EM + G    + TF
Sbjct: 31  GCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTF 90

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I  LC+    ++AL ++++M+   + P+   + ++I   C++  L+ A   F +M V
Sbjct: 91  GSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERM-V 149

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            SG   LP+ VT+  +++   K  + E   +I   M+  G    + TYAT+++GY + G 
Sbjct: 150 QSG--CLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGR 207

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            ++AL L   +   G  P+  +Y++ I  L  + D       L +M    +  D   Y+ 
Sbjct: 208 IDQALSLMRRLKGTGRSPSGSLYSTLIDGL-CKHDRHDEARELFEMAAGDV-QDVIVYTS 265

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
              GLC+ G + +A  +H +++E     D  SYN++I  LCK N ++ AK+L+   + R 
Sbjct: 266 FISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERK 325

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV-EKKPNLVIYNSIINGLCKDASLDAA 518
            +P +     L+DG CK   +E A  + E M +  ++ P++V Y+++I+GLCK   LD A
Sbjct: 326 CMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDA 385

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +LQ  +R G + D +TY  +I+ +   G++ EA  +F  M   G A++ V YNILI  
Sbjct: 386 YVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRG 445

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C+     +A  +++ M   GI P+ V+ +T+V    K    EE   L + M    + PD
Sbjct: 446 YCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESL-PD 504

Query: 638 N 638
           +
Sbjct: 505 S 505



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 218/458 (47%), Gaps = 7/458 (1%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++++K+ +   +  +  T+  +I   CK  ++ +A++L   M  +GI P +V F  +I +
Sbjct: 37  YRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRK 96

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++   + AL++F +M  M    V P++  +  +I   CK+ +++ A      M+++G 
Sbjct: 97  LCELNFTDKALQIFHQMIDMK---VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGC 153

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY  L+    +    E+  ++ +EM+ +G  P  V Y + ++     G ++ AL 
Sbjct: 154 LPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALS 213

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           ++  +      P    YS L  GLC++    +A +L      +  V D   Y   I+ LC
Sbjct: 214 LMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLC 271

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  L  AK +   MI  G  PD ++Y  +I   CK   +  A ++ +   + +  P + 
Sbjct: 272 KAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVP 331

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIG--LLDAITYNTLINGYFINGKIAEAFAMFSE 558
           +   +++GLCK   ++ A  +L+     G      +TY+ +I+G     ++ +A+ +  +
Sbjct: 332 VCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQK 391

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           MR  G   + V Y  +I+  CK G   +AREL + M   G   D V Y  L+  + +   
Sbjct: 392 MRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAK 451

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +E I + ++M   G+ P+  + + I+  L  E   E+
Sbjct: 452 VDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEE 489



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 225/501 (44%), Gaps = 65/501 (12%)

Query: 80  FYTWVGENNRFSHSLESSCAIVHLLVN-------WRRFDDALLLMGNLMSANSVSPLEFL 132
           F+ W      F H+  +  +++ + VN       +R F D L+    L   +  +    +
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELV---TLFRPDDFTYGTLI 59

Query: 133 EGLLDSYEICKA------------TPAV--FDALVRACTQIGATEGAYDVIQKL---KVK 175
            G   + +I +A            TP +  F +L+R   ++  T+ A  +  ++   KVK
Sbjct: 60  RGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVK 119

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
             +     +   + HL K+N++      ++ MV  G + +  T+ +++++L K CK E+ 
Sbjct: 120 PDAF---LYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQG 176

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG----------------- 278
             ++  ML  G  P +V +  ++N  C+ G ++ AL L R++                  
Sbjct: 177 HQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDG 236

Query: 279 ---------------VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
                          + +GD  + + + +   I+G CK G+++ A+ +   MI+AG   +
Sbjct: 237 LCKHDRHDEARELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 294

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y  +I    +     EA  L D+ ++R  MP   V    +  L     VE A  +L 
Sbjct: 295 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354

Query: 384 DMIDK-HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            M++     P   TYS +  GLC+   +  A+ +  ++     V D  +Y  +I+  CK 
Sbjct: 355 RMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKV 414

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  A++L   M  RG   D++ Y  LI GYC+   ++ A+ + E M     +PN+V  
Sbjct: 415 GRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSL 474

Query: 503 NSIINGLCKDASLDAAKSLLQ 523
           ++I++GLCK++ ++ A+ L++
Sbjct: 475 STIVDGLCKESRVEEARLLME 495



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 164/380 (43%), Gaps = 35/380 (9%)

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
           ++A  + G   N  T  +L++ +   G   EA R+  + +     P++  Y + I     
Sbjct: 5   QWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCK 64

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
              +  A+ +L +M    I P   T+  L + LC      +A ++ +Q+++  +  DA+ 
Sbjct: 65  AEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFL 124

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y ++I +LCK N L  A      M+  G +PD +TY  L+    K    E   Q++E M 
Sbjct: 125 YTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEML 184

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG---------------------- 529
                P LV Y +++NG CK   +D A SL++  +  G                      
Sbjct: 185 SKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHD 244

Query: 530 ------------LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
                       + D I Y + I+G    GK+ EA A+  +M   G A + V YN++I  
Sbjct: 245 EARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 304

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG-VSP 636
           LCK     +A+ELM   +    +P     T LV    K+   EE   + + M+ +G  +P
Sbjct: 305 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364

Query: 637 DNQTYNAIISPLLGEKSAED 656
              TY+A+I  L      +D
Sbjct: 365 SVVTYSAVIDGLCKADRLDD 384



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 184/396 (46%), Gaps = 12/396 (3%)

Query: 100 IVHLLVNWRRFDDALL---LMGNLMSANSVS-PLEFLEGLLDSYEICKATPAVFDALVRA 155
           I H +++ +   DA L   ++G+L   N +     + E ++ S   C      +  LV +
Sbjct: 109 IFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSG--CLPDKVTYTVLVHS 166

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
             +    E  + + +++  KGHS  +  +   ++   K   I +   L + +   G   +
Sbjct: 167 LFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPS 226

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
            + ++ +I  LCK  + +EA  L+   + +G   +V+ +   I+  C+ G L+ A  +  
Sbjct: 227 GSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHV 284

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           KM + +G    P+ V++N II   CK  RV  A+E+    ++      V     L+DG  
Sbjct: 285 KM-IEAG--CAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 341

Query: 336 RGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           +    EEA  + + M++ G   P+ V Y++ I  L     ++ A  VL  M      PD 
Sbjct: 342 KSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDV 401

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ +    C+ G + +A +L  ++ E     D  +YNILI   C++  +  A  ++  
Sbjct: 402 VTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEE 461

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           M  RG+ P++++  T++DG CK   +E A  + E M
Sbjct: 462 MAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 20/190 (10%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           +V  L   RR ++A +++  ++     +P       + +Y       AV D L +A    
Sbjct: 336 LVDGLCKSRRVEEACVILERMLETGDRAPS------VVTYS------AVIDGLCKA---- 379

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
              + AY V+QK++  G    +  +   +    K+  +    +L++ M   G   +V  +
Sbjct: 380 DRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAY 439

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I   C+  K++EA+++   M   GI PNVV  + I++  C+   +E A  L  KM  
Sbjct: 440 NILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNF 499

Query: 280 MSGDSVLPNS 289
            S    LP+S
Sbjct: 500 ES----LPDS 505


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/601 (25%), Positives = 278/601 (46%), Gaps = 20/601 (3%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
            L  S V  +    +  P LA  F+T + E+  F H++++  A++ +L  WR       L
Sbjct: 60  DLNTSRVVEIFYNLKNEPNLAWSFFTQLKESG-FQHNVDTYAALIRVLCRWRLERKLQSL 118

Query: 117 MGNLMSANSVSPLEF-LEGLLDSYEICKATPA---------VFDALVRACTQIGATEGAY 166
           +  ++ +   S L F +  L D                   V D LV+A  ++G  + A 
Sbjct: 119 LSEIVGSKE-SVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAI 177

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D + + K +G    I + N  ++ L++  +I     +Y+ +   G   N  T+ + I AL
Sbjct: 178 DALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKAL 237

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C++   EEA+ ++  M ++G+ PN V  +  I   C     +   +  R +   +     
Sbjct: 238 CRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN----W 293

Query: 287 P-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           P ++  +  +I GFC   +++ AE++   M+  GI  +   Y  LI  Y + G+  +A+ 
Sbjct: 294 PIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVA 353

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L ++MV  G+  N V+ +S +  L   G     +    +  D  I  D   Y+I+   LC
Sbjct: 354 LHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALC 413

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G V++A +L N++    M  D   Y  LI   C    L  AK +   M  RG+ PDI+
Sbjct: 414 KLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIV 473

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY  L+ G+ + G  + A+++ + +     KPN   +N II GLC    +  A++ L   
Sbjct: 474 TYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTL 533

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +   L +   Y+ +++GY       +A+ +FS +   GI V K     L++ LC  G Y 
Sbjct: 534 EDKCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYD 590

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L++ M+   + P+ + Y  L+  F ++   +    + D +V  G++PD  TY  +I
Sbjct: 591 KALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 650

Query: 646 S 646
           +
Sbjct: 651 N 651



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 277/566 (48%), Gaps = 39/566 (6%)

Query: 121 MSANSVSPLEFLEGLLD------SYEICKATPAV--------FDALVRA-CTQIGATEGA 165
           ++ N+V+   ++EGL         YE  +A  A         + A++R  C+++   E A
Sbjct: 258 VNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKE-A 316

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
            DV   +  +G +   + +   +    K   + +   L+ +MVS G   N    + ++  
Sbjct: 317 EDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQC 376

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LC+     E +  +     SGI+ + V +N++++  C++G +E A++L  +M    G  +
Sbjct: 377 LCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM---KGRRM 433

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
             + V +  +I G+C  G++  A+ +   M + GI+ ++ TY  L+ G++R G  +EAL 
Sbjct: 434 SLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALE 493

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L D +  +GL PN+  +N  I  L   G V+ A   L+ + DK  C ++  YS +  G C
Sbjct: 494 LLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK--CLEN--YSAMVDGYC 549

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           +    ++A++L +++ ++ ++    S   L++ LC       A  LL  M+   + P+ I
Sbjct: 550 KANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQI 609

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            YG LI  +C+ G+++ A  V++ + +    P+++ Y  +ING C+   L  A+ +    
Sbjct: 610 MYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDM 669

Query: 526 QRIGLL-DAITYNTLINGYF-INGKIA--------------EAFAMFSEMRNVGIAVNKV 569
           +  G+  D ITY  +++G+  +N K+A              +A   +SEM+ +GI  + V
Sbjct: 670 KERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVV 729

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y +LI+  CK    Q A  L   MI  G+ PD VTYT L++        +  I L ++M
Sbjct: 730 CYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEM 789

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAE 655
              G+ PD++  + +   +L  +  +
Sbjct: 790 SFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 208/458 (45%), Gaps = 19/458 (4%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK---ECKLEEALSLYYRMLKSGIWPNV 251
           NE    W  + ++   G+  NV+T+  +I  LC+   E KL+  LS        G   +V
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV-----GSKESV 129

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + F+        +  L   L+           SVL   +  + ++  + ++G  + A + 
Sbjct: 130 LGFD--------ITALFDVLREGGGEVEGEHSSVLI--LVLDMLVKAYVRVGMFDEAIDA 179

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
            +   + G   ++ +   L++     G  + A+ +   + + GL PN+  Y   I  L  
Sbjct: 180 LFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCR 239

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +G+ E A+ V  +M +  + P+  T S   +GLC +      ++    +   +   D ++
Sbjct: 240 KGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFA 299

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  +I   C    L  A+ +   M+  G+ PD   YG LI  YCK GN+  AV ++ +M 
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMV 359

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
               K N VI +SI+  LC+           +  +  G+ LD + YN +++     GK+ 
Sbjct: 360 SNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 419

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EA  + +EM+   ++++ V Y  LI   C  G    A+ + + M   GI PD VTY  LV
Sbjct: 420 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 479

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             FS+N   +E +EL D +   G+ P++ T+N II  L
Sbjct: 480 GGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 517



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 1/262 (0%)

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
            +L K   R G   +A     Q      V    S N L+N L +   +  A  +   +  
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL P+  TYG  I   C+ GN E AV V+  M++    PN V  ++ I GLC     D 
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
               L+A +     +D   Y  +I G+    K+ EA  +F +M N GIA +   Y  LI+
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             CK G   QA  L   M+ +GI  + V  ++++    +     EV++   +   SG+  
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFL 400

Query: 637 DNQTYNAIISPLLGEKSAEDQV 658
           D   YN ++  L      E+ V
Sbjct: 401 DEVLYNIVVDALCKLGKVEEAV 422


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 161/626 (25%), Positives = 289/626 (46%), Gaps = 49/626 (7%)

Query: 28  NPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN--RVVSE-FRKSPK--LALEFYT 82
           N    D     I V L  R W +  Q    +  S  N  +++++ F +S    LAL F+ 
Sbjct: 26  NEKAVDDEMEIIKVILTNRGWNLGSQNGYRIDLSQFNVMKILNDLFEESTDAALALYFFR 85

Query: 83  WVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSP--LEFLEGLLDSYE 140
           W        H++ES C ++H+LV+      A+ L+ +L+S NS           + +++ 
Sbjct: 86  WSEYCMGSKHTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSGEEGWHNIFLKIHETHT 145

Query: 141 ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
             +    V+  LV    +   T+ A  +I K++       I   N+ L  L++  ++   
Sbjct: 146 KRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLA 205

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           W   KEM S                                    G+  N    ++ I+ 
Sbjct: 206 WDFLKEMKS-----------------------------------QGLGLNASIISLFISG 230

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C  G+++   KL  +M  +    + P+ V +  +I+  CK+  ++ A  I + M + G+
Sbjct: 231 YCSQGNIDTGWKLLMEMKYLG---IKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGV 287

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  + ++++DGY + G SEEA+   D +    L PN  V+NS I  L  +G++  A  
Sbjct: 288 FLDSVSVSSVVDGYCKVGKSEEAM---DVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAK 344

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V  DM +  + PD F+Y+ +  G C+   +  A K   ++L+  +     +Y +LI+  C
Sbjct: 345 VFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCC 404

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K  N+  A+ L   MI  GL+PD+++Y TL++GY K G+++ A ++   M+     P+LV
Sbjct: 405 KPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLV 464

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN +I+GL K   ++ AK +L    R G   D +T+  +I G+   G   EAF +F  M
Sbjct: 465 TYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYM 524

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               +  + V  + L+N  C+  C  +A  L   M+  G+  D + Y +L+  F    + 
Sbjct: 525 SEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNI 584

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAII 645
           ++   L   M+  G+ P+N T++A++
Sbjct: 585 DDACHLVSMMIEHGIMPNNITHHALV 610



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 193/395 (48%), Gaps = 9/395 (2%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           + M++N   +    + ALKL  KM  ++   + P     N ++    +  ++  A +   
Sbjct: 154 YGMLVNCYVKENMTQVALKLICKMRHLN---IFPLIGVCNSLLKALLESEQLNLAWDFLK 210

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M   G+  N    +  I GY   G+ +   +L  EM   G+ P+ V Y   I  L    
Sbjct: 211 EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMS 270

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE-HMVGDAYSY 432
            ++ A  +L  M    +  D  + S +  G C+ G  ++A      VLE  ++  + + +
Sbjct: 271 LLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAM----DVLEVFNLSPNIFVF 326

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N  I+ LC   N+  A ++   M   GLIPD  +Y T++ GYCK  +I  A++    M K
Sbjct: 327 NSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLK 386

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
              +P++  Y  +I+  CK  +++ A+ L Q     GL+ D ++YNTL+NGY   G + +
Sbjct: 387 RGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQK 446

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           AF + S MR+ G++ + V YNILI+ L K G   +A++++  +   G  PD VT+T ++ 
Sbjct: 447 AFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIG 506

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            FS   + EE   L   M    + PD  T +A+++
Sbjct: 507 GFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLN 541



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 4/324 (1%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L++ Y +   ++ AL+L  +M    + P   V NS +  L     +  A   L +M 
Sbjct: 154 YGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMK 213

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + +  +    S+   G C  G +   +KL  ++    +  D  +Y I+I+ LCK + L 
Sbjct: 214 SQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLK 273

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +L  M   G+  D ++  +++DGYCK G  E A+ V E        PN+ ++NS I
Sbjct: 274 EATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLE---VFNLSPNIFVFNSFI 330

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LC D ++  A  + Q    +GL+ D  +Y T++ GY     I+ A     +M   GI 
Sbjct: 331 SKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIR 390

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   Y +LI+  CK G  + A  L + MI  G++PD V+Y TL+  + K    ++  EL
Sbjct: 391 PSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFEL 450

Query: 626 HDDMVLSGVSPDNQTYNAIISPLL 649
              M  +GVSPD  TYN +I  L+
Sbjct: 451 LSMMRSAGVSPDLVTYNILIHGLI 474


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 206/425 (48%), Gaps = 5/425 (1%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           +    TFN V     K  +LE+   +Y  M+++G       + ++I+  C+VG+ + A K
Sbjct: 7   IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           L   M +         ++ ++ IIN  CKL RVE A E+   M +     +  TY  +++
Sbjct: 67  LLHTMRLKRFKR---KAIAYSTIINWLCKLNRVEEARELIEKMARYAPP-DALTYGPIVE 122

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              +    ++AL   +EM  RG+ P+  +YN  +  L  E  VE A  +   M+ + I P
Sbjct: 123 RLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP 182

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  TY+ L  GLC+   ++ A++L  ++  +  V    SYN LI+  CK  +L AAK + 
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M+    +P+++TY TLIDG  K G ++ A +V + M K    PN+  Y+ +I+G CK 
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 513 ASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +D A  LL+     G+    +TYN L+N      K+ +AF +F  M         V Y
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N L+  LC       A  L   MI  G  PD +TY TL    ++     E  EL + M L
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKL 422

Query: 632 SGVSP 636
           +  +P
Sbjct: 423 TKRNP 427



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 176/340 (51%), Gaps = 4/340 (1%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           ++   E A ++I+K+       ++  +   +  L K   I       +EM + G   +  
Sbjct: 92  KLNRVEEARELIEKMARYAPPDAL-TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAF 150

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +N V+  LC+E K+EEA  L+ +M+K  I PNVV +N +IN  C+   +E A +LF++M
Sbjct: 151 IYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEM 210

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
              +G   +P  V++N +I+GFCK   +  A+++   M+++    NV TY TLIDG ++ 
Sbjct: 211 ---AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKS 267

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  + A  + D MVK+G+ PN   Y+  I        V+ A  +L  M+ + I P   TY
Sbjct: 268 GKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTY 327

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +IL   LCR   ++ AFKL   + +        +YN L+  LC    L  A +L + MI 
Sbjct: 328 NILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 387

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
           +G  PD ITY TL  G  + G +  A ++ E MK  ++ P
Sbjct: 388 KGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 194/400 (48%), Gaps = 35/400 (8%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M+   V+P + T N + +GF K GR+E  +E+   M++AG       Y  LI    + G+
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWL------------------FAEGD------- 374
            +EA +L   M  +      + Y++ I+WL                  +A  D       
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI 120

Query: 375 ---------VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
                    ++ AL  + +M  + I PD F Y+ +  GLC+   V++A  L  +++++ +
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             +  +YN LIN LCK+  +  A +L   M  +G +P  ++Y TLIDG+CK  ++  A  
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYF 544
           V++ M +    PN+V Y ++I+GL K   + AA  +L    + G+   + TY+ LI+G+ 
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
              ++ EA  +  +M   GIA   V YNIL+N LC+    + A +L + M      P  V
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           TY TL+     +   +    L+ +M+  G  PD  TY+ +
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 200/394 (50%), Gaps = 6/394 (1%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E  +G++++    +A+   +  L+    ++G  + AY ++  +++K       A++  ++
Sbjct: 31  EVYQGMVEAGYTLRASG--YGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIIN 88

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L KLN +    +L ++M      + + T+  ++  LCK  ++++AL+    M   GI P
Sbjct: 89  WLCKLNRVEEARELIEKMARYAPPDAL-TYGPIVERLCKTKRIDDALATVEEMATRGIKP 147

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +   +N +++  CQ   +E A  LF KM       + PN VT+N +ING CK  R+E A 
Sbjct: 148 DAFIYNFVLSGLCQEEKVEEARLLFEKM---VKQRINPNVVTYNTLINGLCKAWRIETAY 204

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E+   M   G      +Y TLIDG+ +      A  + D+MV+   +PN V Y + I  L
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G V+ A  VL  M+ K + P+  TYS L  G C+   V +A KL  Q++ + +    
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YNIL+N LC+++ L  A +L   M  R   P ++TY TL+   C    ++GA ++Y  
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           M      P+ + Y+++  GL +   +  A+ L++
Sbjct: 385 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELME 418



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 202/415 (48%), Gaps = 5/415 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F+ +     + G  E   +V Q +   G+++    +   +S L K+      +KL   
Sbjct: 11  ATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHT 70

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M    +      ++ +I  LCK  ++EEA  L  +M +    P+ + +  I+   C+   
Sbjct: 71  MRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLCKTKR 129

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ AL    +M       + P++  +N +++G C+  +VE A  +   M+K  I+ NV T
Sbjct: 130 IDDALATVEEMATR---GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TLI+G  +    E A  L  EM  +G +P  V YN+ I     + D+  A  V   M+
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
             +  P+  TY+ L  GL ++G V+ A ++ + ++++ +  +  +Y+ LI+  CK   + 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +LL  M+ +G+ P ++TY  L++  C+   +E A +++  M +    P +V YN+++
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
             LC    LD A  L       G   DAITY+TL  G    GK+ EA  +  +M+
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 5/414 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N       K   + +  ++Y+ MV  GY    + + ++I  LCK    +EA  L + M 
Sbjct: 13  FNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMR 72

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
                   + ++ IIN  C++  +E A +L  KM   +     P+++T+  I+   CK  
Sbjct: 73  LKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP----PDALTYGPIVERLCKTK 128

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R++ A      M   GI  +   Y  ++ G  +    EEA  L ++MVK+ + PN V YN
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I+ L     +E A  +  +M  K   P   +Y+ L  G C+   +  A  + ++++  
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           + V +  +Y  LI+ L KS  + AA ++L  M+ +G+ P++ TY  LIDG+CK   ++ A
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLING 542
            ++ E M      P +V YN ++N LC+   L+ A  L +  +QR      +TYNTL+  
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
              + ++  A  +++EM   G   + + Y+ L   L + G   +A+ELM+ M L
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKL 422



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 4/299 (1%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M  R ++P    +N+        G +E    V   M++         Y IL   LC+ G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +A+KL + +  +     A +Y+ +IN+LCK N +  A++L+  M  R   PD +TYG 
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQR 527
           +++  CK   I+ A+   E M     KP+  IYN +++GLC++  ++ A+ L +    QR
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           I   + +TYNTLING     +I  A+ +F EM   G    +V YN LI+  CK      A
Sbjct: 180 INP-NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +++   M+    +P+ VTYTTL+   SK+   +   E+ D MV  GV+P+  TY+ +I 
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLID 297



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 107/231 (46%)

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             ++  A ++N + +   K+  L   K++   M+  G       YG LI   CK GN + 
Sbjct: 4   RRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDE 63

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           A ++   M+    K   + Y++IIN LCK   ++ A+ L++   R    DA+TY  ++  
Sbjct: 64  AYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVER 123

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
                +I +A A   EM   GI  +   YN +++ LC+    ++AR L + M+   I P+
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
            VTY TL+    K    E   EL  +M   G  P   +YN +I     +K 
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 254/507 (50%), Gaps = 7/507 (1%)

Query: 146 PAVFDA--LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF    +V A  + G  E A + +++++  G  ++  ++N+ +   V L +I     +
Sbjct: 64  PDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGV 123

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEAC 262
            K M   G + N  T  L+I   CK+CK+EEA  +   M K  G+  +   +  +I+  C
Sbjct: 124 LKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYC 183

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +VG +  A+++  +M  +    +  N    N +ING+CK G+V   E +   M K  +  
Sbjct: 184 KVGKMGDAIRVRDEMLKVG---LKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  +Y TL+DGY R G S +A  +CD+M+++G+ P  V YN+ +  L   GD + AL + 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ + + P+   Y  L  GL + G   +A  L + +L   +    Y++N +IN LCK 
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  AK+    M   G  PD ITY TL DGYCK GN+E A ++ E M+K E  P++ +Y
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMY 420

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I GL     +     LL      GL  + +TY  LI G+   G++ +AF+ + EM  
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG 480

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G A N +  + +++ L + G   +A  L++ M+   ++ D+           +     +
Sbjct: 481 KGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWK 540

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
           + +  D+  +    P+N  YN  ++ L
Sbjct: 541 IADTLDESAIKFSLPNNVVYNIAMAGL 567



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 247/499 (49%), Gaps = 5/499 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +++   + G  + A  V   +   G   S+ + N+ LS+LVK  E      +Y +M    
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
            V +V T  +++ A CK  K+E A+     M K G   N V +N +++    +GD+E A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATL 330
            + +    MS   V+ N VT   +I G+CK  +VE AE++   M K  G+  +   Y  L
Sbjct: 122 GVLK---FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGAL 178

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDGY + G   +A+R+ DEM+K GL  N  V NS I+     G V     +L  M    +
Sbjct: 179 IDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDL 238

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD ++Y  L  G CR+G   +AF + +Q+L + +     +YN L+  LC+  +   A +
Sbjct: 239 KPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALR 298

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M+ RG+ P+ + Y TL+DG  K G+   A+ +++++       ++  +N++INGLC
Sbjct: 299 LWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLC 358

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   +D AK   +  + +G   D ITY TL +GY   G + EAF +  +M    I  +  
Sbjct: 359 KMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIE 418

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YN LI  L       +  +L+  M   G+ P+ VTY  L+  +      ++    + +M
Sbjct: 419 MYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEM 478

Query: 630 VLSGVSPDNQTYNAIISPL 648
           +  G +P+    + I+S L
Sbjct: 479 IGKGFAPNVIICSKIVSSL 497



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 228/464 (49%), Gaps = 24/464 (5%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +M+  G    V T+N ++  LC+    ++AL L++ ML+ G+ PN V +  +++   ++G
Sbjct: 267 QMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMG 326

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTH-----NCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           D   AL L+        D +L   +       N +ING CK+G ++ A+E    M + G 
Sbjct: 327 DFSRALTLW--------DDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGC 378

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +  TY TL DGY + G+ EEA ++ ++M K  + P+  +YNS I  LF    +   + 
Sbjct: 379 KPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLID 438

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI---- 436
           +L++M  + + P+  TY  L  G C  G + +AF  + +     M+G  ++ N++I    
Sbjct: 439 LLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFE-----MIGKGFAPNVIICSKI 493

Query: 437 -NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
            + L +   +  A  LL  M+   L+ D        +   +  +        +       
Sbjct: 494 VSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFS 553

Query: 496 KPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
            PN V+YN  + GLCK   + DA +  L  S      D  TY TLI+G+   G + EAF 
Sbjct: 554 LPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFN 613

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           +  EM N G+  N   YN L+N LCK G   +AR L   + L G+IP+ VTY  L+  + 
Sbjct: 614 LRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYC 673

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           K+ SP E ++L   M+  G+SP   TY+++I+    +   E+ +
Sbjct: 674 KSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAM 717



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 237/533 (44%), Gaps = 49/533 (9%)

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           DSY  C         LV    + G +  A++V  ++  KG   ++  +N  L  L +  +
Sbjct: 241 DSYSYC--------TLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGD 292

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
                +L+  M+  G   N   +  ++  L K      AL+L+  +L  GI  ++  FN 
Sbjct: 293 YKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNT 352

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE------- 309
           +IN  C++G+++ A + F++M  +      P+ +T+  + +G+CK+G VE A        
Sbjct: 353 MINGLCKMGEMDGAKETFKRMEELG---CKPDGITYRTLSDGYCKVGNVEEAFKIKEKME 409

Query: 310 ----------------------------EIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
                                       ++   M   G+  NV TY  LI G+   G  +
Sbjct: 410 KEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLD 469

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +A     EM+ +G  PN ++ +  +  L+  G ++ A  +L  M+D  +  DH       
Sbjct: 470 KAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQ 529

Query: 402 KGLCRN-GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
               R   C K A  L    ++  +  +   YNI +  LCKS  +  A++    +     
Sbjct: 530 NADIRKLDCWKIADTLDESAIKFSLPNNVV-YNIAMAGLCKSGKVNDARRFFLGLSHGSF 588

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD  TY TLI G+   G +  A  + + M      PN+  YN+++NGLCK   LD A+ 
Sbjct: 589 TPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARR 648

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L       GL+ + +TYN LI+GY  +G   EA  +  +M   GI+ + + Y+ LIN  C
Sbjct: 649 LFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFC 708

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           K    ++A +L+  M    +     T++ LV    ++   +++ +LH+ M ++
Sbjct: 709 KQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMA 761



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 196/434 (45%), Gaps = 40/434 (9%)

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           MI+    + G ++ AL +F  MG        P+  + N +++   K G    A  +   M
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRK---PSLRSCNSLLSNLVKRGESYSAVLVYDQM 57

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
            +  I  +V T A +++ Y + G  E A+    EM K G   N V YNS +    + GD+
Sbjct: 58  RRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDI 117

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK-LHNQVLEEHMVGDAYSY-- 432
           EGA  VL  M +K +  +  T ++L KG C+   V++A K L     E+ +V D Y+Y  
Sbjct: 118 EGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGA 177

Query: 433 ---------------------------------NILINYLCKSNNLAAAKQLLSSMIVRG 459
                                            N LIN  CK+  +   ++LL  M    
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L PD  +Y TL+DGYC+ G    A  V + M +   +P +V YN+++ GLC+      A 
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDAL 297

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L     + G+  + + Y TL++G F  G  + A  ++ ++   GI  +   +N +IN L
Sbjct: 298 RLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGL 357

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           CK G    A+E  K M   G  PD +TY TL   + K  + EE  ++ + M    + P  
Sbjct: 358 CKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSI 417

Query: 639 QTYNAIISPLLGEK 652
           + YN++I  L   K
Sbjct: 418 EMYNSLIVGLFTSK 431


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 247/501 (49%), Gaps = 9/501 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK---LNEIGRFWKLYK 205
           +  +V A  + G TE A   + K+   G  +  H   + L    +   L +  + + +  
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           + V+C    N  +++++I+ LC+  +LEEA  L  +M + G  P+   + ++I   C  G
Sbjct: 258 KEVTCA--PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            ++ A  LF +M +  G    PN  T+  +I+G C+ G++E A  +   M+K  I  +V 
Sbjct: 316 LIDKAFNLFDEM-IPRG--CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  LI+GY + G    A  L   M KR   PN   +N  +  L   G    A+ +L  M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +D  + PD  +Y++L  GLCR G +  A+KL + +    +  D  ++  +IN  CK    
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A   L  M+ +G+  D +T  TLIDG CK G    A+ + E + K+         N I
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ++ L K   +    ++L    ++GL+ ++ TY TL++G   +G I  +F +   M+  G 
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N   Y I+IN LC+FG  ++A +L+  M   G+ P++VTYT +V  +  N   +  +E
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
               MV  G   +++ Y++++
Sbjct: 673 TVRAMVERGYELNDRIYSSLL 693



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 251/512 (49%), Gaps = 11/512 (2%)

Query: 143 KATPAVFDALVRACTQIGAT--EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           +   AV  AL++ C++      +  Y   +  +V G  ++   +++ L  L KL+     
Sbjct: 120 RVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           +  Y+ M + G+V  +  +  ++ ALCK    E A     ++LK G   +      ++  
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239

Query: 261 ACQVGDLEFALKLFRKMGVMSGD-SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
            C+  +L  ALK+F    VMS + +  PNSV+++ +I+G C++GR+E A  ++  M + G
Sbjct: 240 FCRGLNLRDALKVF---DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              + RTY  LI      G  ++A  L DEM+ RG  PN   Y   I  L  +G +E A 
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V   M+   I P   TY+ L  G C++G V  AF+L   + +     +  ++N L+  L
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C+      A  LL  M+  GL PDI++Y  LIDG C+ G++  A ++  +M   + +P+ 
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           + + +IIN  CK    D A + L    R G+ LD +T  TLI+G    GK  +A  +   
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536

Query: 559 MRNVGIAVNKVGYNILINFLCKFGC--YQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           +  + I       N++++ L K GC   ++   L K+  L G++P  VTYTTLV    ++
Sbjct: 537 LVKMRILTTPHSLNVILDMLSK-GCKVKEELAMLGKINKL-GLVPSVVTYTTLVDGLIRS 594

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                   + + M LSG  P+   Y  II+ L
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGL 626



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 217/436 (49%), Gaps = 4/436 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+    ++G  E A+ +  ++  KG   S   +   +  L     I + +
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ EM+  G   NV+T+ ++I  LC++ K+EEA  +  +M+K  I+P+V+ +N +IN  
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +  A +L   + VM   +  PN  T N ++ G C++G+   A  +   M+  G+ 
Sbjct: 382 CKDGRVVPAFEL---LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ +Y  LIDG  R G    A +L   M    + P+ + + + I+    +G  + A   
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+ K I  D  T + L  G+C+ G  + A  +   +++  ++   +S N++++ L K
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +     +L  +   GL+P ++TY TL+DG  + G+I G+ ++ E MK     PN+  
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  IINGLC+   ++ A+ LL A Q  G+  + +TY  ++ GY  NGK+  A      M 
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678

Query: 561 NVGIAVNKVGYNILIN 576
             G  +N   Y+ L+ 
Sbjct: 679 ERGYELNDRIYSSLLQ 694



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 229/510 (44%), Gaps = 23/510 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     +  L+    + G  E A  V +K+       S+  +N  ++   K   +   +
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L   M       NV TFN ++  LC+  K  +A+ L  RML +G+ P++V +N++I+  
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +  A KL   M       + P+ +T   IIN FCK G+ + A      M++ GI 
Sbjct: 452 CREGHMNTAYKLLSSMNCFD---IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T  TLIDG  + G + +AL + + +VK  ++      N  +  L     V+  L +
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  +    + P   TY+ L  GL R+G +  +F++   +     + + Y Y I+IN LC+
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A++LLS+M   G+ P+ +TY  ++ GY   G ++ A++    M +   + N  I
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688

Query: 502 YNSIINGLC-------------------KDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           Y+S++ G                     ++   +    L+   +++G   +     L+  
Sbjct: 689 YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR 748

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G+  E+  +   +   G+ + K   +I++   C    + +  EL+ +++  G +P 
Sbjct: 749 LCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPS 807

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           + ++  ++    K    E   EL  +++ S
Sbjct: 808 FKSFCLVIQGLKKEGDAERARELVMELLTS 837



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 2/309 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M   G +   + Y + ++ L   G  E A   +S ++      D    + L  G CR  
Sbjct: 185 RMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL 244

Query: 409 CVKQAFKLHNQVLEEHMVG-DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
            ++ A K+ + + +E     ++ SY+ILI+ LC+   L  A  L   M  +G  P   TY
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI   C  G I+ A  +++ M     KPN+  Y  +I+GLC+D  ++ A  + +   +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364

Query: 528 IGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
             +  + ITYN LINGY  +G++  AF + + M       N   +N L+  LC+ G   +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  L+K M+ +G+ PD V+Y  L+    +        +L   M    + PD  T+ AII+
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484

Query: 647 PLLGEKSAE 655
               +  A+
Sbjct: 485 AFCKQGKAD 493



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 2/160 (1%)

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFS 557
           ++ Y +I+N LCK+   +AA+  +    +IG +LD+    +L+ G+     + +A  +F 
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254

Query: 558 EM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            M + V  A N V Y+ILI+ LC+ G  ++A  L   M   G  P   TYT L+      
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              ++   L D+M+  G  P+  TY  +I  L  +   E+
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 177/690 (25%), Positives = 295/690 (42%), Gaps = 119/690 (17%)

Query: 50  ILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
           +L Q    L   LV  ++S F KSP+L ++F+ W G    + H+       V++      
Sbjct: 128 VLRQFRQKLNPDLVVEILS-FLKSPELCVKFFLWAGRQIGYDHT-----PAVYI------ 175

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLL-DSYEICKATPAVFDALVRACTQIGATEGAYDV 168
              ALL +    S + V P EFL  +  D  E+      + + L+R C + G    A + 
Sbjct: 176 ---ALLDVFERGSYDRV-PEEFLREIRGDDKEVLGK---LLNVLIRKCCRNGLWNVALEE 228

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG----------------- 211
           + +LK  G+  +   +N  +   ++ +++     +++EM   G                 
Sbjct: 229 LGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCK 288

Query: 212 ---------------YVENVNTFNLVIYALCKECKLEEALSLYYRM-------------- 242
                          +V N   +N +I  LC+    EEA+    RM              
Sbjct: 289 VGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRI 348

Query: 243 ---------------------LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
                                +  G +P+   FN +++  C+  D  +A KL +KM    
Sbjct: 349 LLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKM---E 405

Query: 282 GDSVLPNSVTHNCIINGFCKLGRV------EFAEEIRYAMIKAGI---DCNVRTYATLID 332
                P  V +N +I   C  G +      E AE+    M+ AG      NV ++A  + 
Sbjct: 406 KCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLC 465

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+   G  E+A ++  EM+  G +P+   Y+  I +L     VE A F+  +M    + P
Sbjct: 466 GF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D +TY+IL     + G +KQA    ++++ +       +Y  LI+   K+  ++ A +L 
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELF 582

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK----------------KVEKK 496
             MI +G  P++ITY  LIDGYCK GNIE A Q+Y  M+                 V +K
Sbjct: 583 ELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEK 642

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAM 555
           PN+V Y ++++GLCK   +  A+ LL+     G   + I Y+ LI+G+    K+ EA  +
Sbjct: 643 PNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEV 702

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F +M   G   N   Y+ LI+ L K        +++  M+ +   P+ V YT ++   SK
Sbjct: 703 FHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSK 762

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
               +E  +L   M   G  P+  TY A+I
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMI 792



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 236/528 (44%), Gaps = 26/528 (4%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           +  R     G  E AY VI ++   G       ++  +  L   + +   + L+KEM   
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G V +V T+ ++I    K   +++A +    M++ G  P VV +  +I+   +   +  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC-------- 322
            +LF    +M      PN +T+  +I+G+CK G +E A +I YA ++   D         
Sbjct: 579 NELFE---LMIAKGCFPNVITYTALIDGYCKSGNIEKACQI-YARMRGDADIPDVDMYFK 634

Query: 323 ---------NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
                    NV TY  L+DG  +    ++A  L + M   G  PN +VY++ I       
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A  V   M++    P+ +TYS L   L ++  +    K+ +++LE     +   Y 
Sbjct: 695 KLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +I+ L K      A +L+  M  +G  P+++TY  +IDG+ K G ++  ++++  M   
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK 814

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEA 552
              PN V Y  +IN  C    LD A +LL+  ++      ++ Y  +I GY    +   +
Sbjct: 815 GCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILS 872

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI--IPDYVTYTTLV 610
             +  E+   G A   + Y +LI+   K G  + A EL K +I   +        YT+L+
Sbjct: 873 LGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLI 932

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             FS         EL  DM+  GV PD  T+  ++  L+  +  E+ +
Sbjct: 933 YSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEAL 980



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 227/489 (46%), Gaps = 30/489 (6%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+ + +++K  G    ++ +   +    K   I +      EMV  G    V T+  +
Sbjct: 506 ENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTL 565

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I+A  K  K+  A  L+  M+  G +PNV+ +  +I+  C+ G++E A +++ +M    G
Sbjct: 566 IHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM---RG 622

Query: 283 DSVLP----------------NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           D+ +P                N VT+  +++G CK  +V+ A ++   M   G + N   
Sbjct: 623 DADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIV 682

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LIDG+ +    +EA  +  +MV+ G  PN   Y+S I  LF +  ++  L VLS M+
Sbjct: 683 YDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKML 742

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +    P+   Y+ +  GL +     +A+KL   + E+    +  +Y  +I+   K+  + 
Sbjct: 743 ENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVD 802

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              +L   M  +G  P+ +TY  LI+  C  G+++ A  + E MK+     ++  Y  +I
Sbjct: 803 KCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVI 862

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEM--RNVG 563
            G  ++  L     LL+  ++ G    I  Y  LI+ +   G++  A  +  E+   ++ 
Sbjct: 863 EGYKREFILSLG--LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMS 920

Query: 564 IAVNKVGYNILI---NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           +A  K  Y  LI   ++  K G    A EL   MI  G+IPD  T+  L+    +    E
Sbjct: 921 MAAKKNLYTSLIYSFSYASKIG---HAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWE 977

Query: 621 EVIELHDDM 629
           E ++L D +
Sbjct: 978 EALQLSDSL 986



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 167/409 (40%), Gaps = 54/409 (13%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
            N++I + C+ G    AL+   ++G +      P  +T+N ++  F +  +++ A+ +  
Sbjct: 209 LNVLIRKCCRNGLWNVALE---ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHR 265

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M + G+  +  T         + G   EAL L +   K   +PN ++YN  I       
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMI------- 315

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
                                        GLC     ++A    N++     + +  +Y 
Sbjct: 316 ----------------------------SGLCEASFFEEAMDFLNRMRSTSCIPNVQTYR 347

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           IL+        L   K++LS MI  G  P    + +L+  YCK  +   A ++ + M+K 
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407

Query: 494 EKKPNLVIYNSIINGLCKDASL----------DAAKSLLQASQRIGLLDAITYNTLINGY 543
           E KP  V+YN +I  +C    L           A   +L A   +  ++ +++   + G+
Sbjct: 408 ECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF 467

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              GK  +A+ +  EM   G   +   Y+ +I FLC     + A  L K M   G++PD 
Sbjct: 468 ---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            TYT L+  FSK    ++     D+MV  G  P   TY  +I   L  K
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAK 573



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 9/355 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     + ALV    +    + A D+++ + V G   +   ++  +    K  ++    +
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +MV  GY  NV T++ +I  L K+ +L+  L +  +ML++   PN+V +  +I+   
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +V   + A KL   M +M      PN VT+  +I+GF K G+V+   E+   M   G   
Sbjct: 762 KVAKTDEAYKL---MLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAP 818

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV-VYNSTIHWLFAEGDVEGALFV 381
           N  TY  LI+     G  +EA  L +EM K+   P +V  Y   I     E  +  +L +
Sbjct: 819 NFVTYTVLINHCCATGHLDEAYALLEEM-KQTYWPKHVSSYCKVIEGYKREFIL--SLGL 875

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS--YNILINYL 439
           L ++      P    Y +L     + G ++ A +LH +V+   M   A    Y  LI   
Sbjct: 876 LEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSF 935

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
             ++ +  A +L   MI  G+IPD+ T+  L+ G  +    E A+Q+ +++ +++
Sbjct: 936 SYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMD 990


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 244/507 (48%), Gaps = 13/507 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +A     +A VR     G  +G    +Q+++++G +    A    +    +     R  K
Sbjct: 52  EALARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALK 111

Query: 203 LY---KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            +   +  + C     V  +N ++ AL +E  +   + +Y  M K+G+ PNV  +N++I 
Sbjct: 112 TFYRARHDLGCA-APTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIK 170

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             CQ   +  A ++  +M   +     P+ V+H  II+  CKL R++ A  I   M   G
Sbjct: 171 ALCQNDRVGAARRMLDEM---ARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG 227

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              N   +A  + G  R     E   + DEMV RGL P+ V Y S +       ++  A 
Sbjct: 228 ASYNAVVHA--LCGQFR---MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMAC 282

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L+ M+ +   P+  T+++L KG   +G V  A  + N ++ E       SYN+LI  L
Sbjct: 283 AILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGL 342

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C   +L  A  + S M     +PD+ TY TLIDG+ K G+++ A+ ++ +M     KPN+
Sbjct: 343 CHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNV 402

Query: 500 VIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           V+Y ++++ LCK    D A++L+ + S      + +T+NTLI      G+   A  +F  
Sbjct: 403 VVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHG 462

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           MR  G   N   YN L++ L + G  + A  ++  M+ HG     V+Y T ++   +   
Sbjct: 463 MRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRM 522

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
            +E + L   M++ G+ PD  T+NAII
Sbjct: 523 IKEAMILLGRMIIQGIQPDAFTFNAII 549



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 216/494 (43%), Gaps = 28/494 (5%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++  +N+ L  L++ N +     +Y  M   G   NV T+NL+I ALC+  ++  A  + 
Sbjct: 126 TVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRML 185

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD---------------- 283
             M + G  P+ V    II+  C++  L+ A  +  +M  +                   
Sbjct: 186 DEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMRE 245

Query: 284 -----------SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
                       + P++V +  I+  FCK   +  A  I   M+  G   NV+T+  L+ 
Sbjct: 246 VFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVK 305

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+   G   +AL + + MV  G  P+ + YN  I  L   GD++ ALFV S M      P
Sbjct: 306 GFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLP 365

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TYS L  G  + G +  A  + N +       +   Y  +++ LCK      A+ L+
Sbjct: 366 DVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLI 425

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M +    P+ +T+ TLI   C  G    A+ V+  M++    PN   YN +++GL ++
Sbjct: 426 DKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFRE 485

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
            + + A  +L      G  L  ++YNT I+G      I EA  +   M   GI  +   +
Sbjct: 486 GNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTF 545

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N +I+  CK G  + A  ++  M       + V YT+L++        ++ +     M+ 
Sbjct: 546 NAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLY 605

Query: 632 SGVSPDNQTYNAII 645
            G+ P+  T+N ++
Sbjct: 606 EGICPNEATWNVLV 619



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 196/410 (47%), Gaps = 8/410 (1%)

Query: 141 ICKATP--AVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           + + TP  A ++A+V A C Q    E  + V+ ++  +G      A+ + +    K  E+
Sbjct: 220 LAEMTPVGASYNAVVHALCGQFRMRE-VFLVVDEMVHRGLRPDTVAYTSIVGAFCKAREL 278

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
                +   MV+ G V NV TF +++     + K+ +AL ++  M+  G  P+ + +N++
Sbjct: 279 RMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVL 338

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I   C +GDL+ AL +F  MG       LP+  T++ +I+GF K G ++ A  I   M  
Sbjct: 339 IRGLCHIGDLKRALFVFSCMG---KSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTN 395

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           AG   NV  Y  ++D   +    ++A  L D+M      PN + +N+ I  L   G    
Sbjct: 396 AGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGR 455

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL V   M      P+  TY+ L  GL R G  + A ++  ++L         SYN  I+
Sbjct: 456 ALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTIS 515

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+   +  A  LL  MI++G+ PD  T+  +I  YCK GN+  A  +   M  V    
Sbjct: 516 GLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPR 575

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           N+V Y S+++GLC    LD A   L      G+  +  T+N L+ G F +
Sbjct: 576 NIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTH 625



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 167/371 (45%), Gaps = 11/371 (2%)

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            H   +      G ++  +     M   G+ C        I  +AR G+++ AL+     
Sbjct: 57  AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYR- 115

Query: 351 VKRGL---MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            +  L    P   VYN  +  L  E  V   + V  +M    + P+ +TY++L K LC+N
Sbjct: 116 ARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQN 175

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             V  A ++ +++  +    D  S+  +I+ LCK + L  A+ +L+ M      P   +Y
Sbjct: 176 DRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGASY 230

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             ++   C    +     V + M     +P+ V Y SI+   CK   L  A ++L     
Sbjct: 231 NAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVT 290

Query: 528 IGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G +  + T+  L+ G+F +GK+ +A  M++ M   G A + + YN+LI  LC  G  ++
Sbjct: 291 EGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKR 350

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  +   M     +PD  TY+TL+  FSK    +  + + +DM  +G  P+   Y  ++ 
Sbjct: 351 ALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVD 410

Query: 647 PLLGEKSAEDQ 657
            +L +K   DQ
Sbjct: 411 -VLCKKVMFDQ 420



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 5/203 (2%)

Query: 133 EGLLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           E L+D  S E C      F+ L+R+   +G    A +V   ++  G   +   +N  L  
Sbjct: 422 ENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHG 481

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +        ++  EM++ G+  ++ ++N  I  LC+   ++EA+ L  RM+  GI P+
Sbjct: 482 LFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPD 541

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
              FN II+  C+ G++  A  +   +G M   +   N V +  +++G C   +++ A  
Sbjct: 542 AFTFNAIIHAYCKEGNVRAAAWM---LGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMV 598

Query: 311 IRYAMIKAGIDCNVRTYATLIDG 333
               M+  GI  N  T+  L+ G
Sbjct: 599 YLLKMLYEGICPNEATWNVLVRG 621


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 221/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  YK
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  + S++  + K G+ P+VV FN ++N   + G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+   K FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLD---KGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++++M
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C++G ++ AF+   +++EE++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 417



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 36/314 (11%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  ++ +  A+ K G+  +V ++ TL++GY R G  ++  RL   M  
Sbjct: 140 NILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L++ M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G++E A +  + M +   + + V Y ++I+GLC++  S+DA K            
Sbjct: 320 GSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEK------------ 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                  M  EM +VG+  +   Y ++IN  CK G      +L+
Sbjct: 368 -----------------------MLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLL 404

Query: 592 KVMILHGIIPDYVT 605
           K M   G +P  VT
Sbjct: 405 KEMQRDGHVPSVVT 418



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 146/269 (54%), Gaps = 1/269 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  +  V   +    + P   +++ L  G  R G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   M+ +GL+P+ +T+ 
Sbjct: 186 DLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A++L+      
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMK 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G   +G +  AF     M    I ++ V Y  LI+ LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            ++++ M+  G+ PD  TYT ++  F K 
Sbjct: 366 EKMLREMLSVGLKPDSGTYTMIINEFCKK 394



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  ++ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NGK+  A  ++ +M +  ++ + + YN LI  LCK G  +QAR 
Sbjct: 238 VPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARN 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K+   E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ +  + + + +  +     S+N L+N   +  +L    +L S+
Sbjct: 137 YFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A +++  M      PN V + ++I+G CK+  
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  + +EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ PD+ TY  II+
Sbjct: 376 GLKPDSGTYTMIIN 389


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 167/605 (27%), Positives = 283/605 (46%), Gaps = 33/605 (5%)

Query: 46  RKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
           +KW        S     V  V+   R   + AL F+ W+   N F H + +   ++  L+
Sbjct: 88  KKWD-----GKSSCRETVGAVIKHLRDGGE-ALTFFRWLQARN-FKHDVFTYNCLLDKLI 140

Query: 106 NWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGA 165
             R    A  +    M A  V P  F                 +  LV++      ++ A
Sbjct: 141 RHRDLKQAGQVFEK-MVAQGVVPNGF----------------TYAVLVQSSCYERNSDEA 183

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY-KEMVSCGYVENVNTFNLVIY 224
                ++  KG   S   +      L    + G F +++ +++     VE +    L++ 
Sbjct: 184 VRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVN 243

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            + ++ K  EA  L+  M+KSG  P+   ++ ++   C++ +L+ A KLF +M V S   
Sbjct: 244 FVIQD-KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAP 302

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +  N+V     ++G CK G++E A E    M +  +  +   Y  LI      G  ++A 
Sbjct: 303 L--NNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAE 359

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
             C E+  R + P++   +S I  L   G V+ AL +L  MI +  CPD  T+S+L   L
Sbjct: 360 EACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINEL 419

Query: 405 CRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV-RGLI 461
           C+   +++A +    +  +        +SYN L+N LCK+  +  A  + S+M+  R  +
Sbjct: 420 CKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFV 479

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD+++Y  LIDG+CK   +  A ++Y+ M  +   PN+  YN+ +NGL +   +  A+ +
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGV 539

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +     G   D ITY+TLI+G+ +  K  +A  +F  M + G   N V YN L++ LCK
Sbjct: 540 YEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCK 599

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
                +A EL + M+  G  PD VTYTTL+  F      E+ +E+ D+MV  G  PD   
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 659

Query: 641 YNAII 645
           YN ++
Sbjct: 660 YNCLL 664



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 222/472 (47%), Gaps = 56/472 (11%)

Query: 124 NSVSPLEFLEGLLDS------YEICK-------ATPAVFDALVRACTQIGATEGAYDVIQ 170
           N+V+   FL GL  S      +E C+       ++  V+D L+R   + G  + A +   
Sbjct: 304 NNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACL 363

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++  +    S    ++ +  L K   +     L + M+  GY  ++ T +++I  LCK  
Sbjct: 364 EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD 423

Query: 231 KLEEALSL-----------------YYRMLKS---------------------GIWPNVV 252
           K++EA                    Y  +L S                        P+VV
Sbjct: 424 KIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            ++++I+  C++ +L  A KL+++M  ++    +PN  T+N  +NG  + GR+  A+ + 
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLN---CVPNVTTYNAFLNGLMRKGRIADAQGVY 540

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M+ AG   +V TY+TLI G++     ++A  L + M+ RG  PN V YN  +H L  E
Sbjct: 541 EEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKE 600

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
              + A  +   M+++   PD  TY+ L  G C  G ++QA ++ ++++ +    D  +Y
Sbjct: 601 SKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAY 660

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N L+    ++     AKQL   M+ R   PD +++  +IDG  K   ++ AV+V+E M++
Sbjct: 661 NCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 720

Query: 493 VEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
                P+LV YNS+I GLC +  L  A  + +   R+ L  D   +N L+  
Sbjct: 721 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 236/497 (47%), Gaps = 23/497 (4%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L+ +     +  +N  L  L++  ++ +  +++++MV+ G V N  T+ +++ + C E  
Sbjct: 120 LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERN 179

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMI---INEACQVGDLE--FALKLFRKMGV--MSGDS 284
            +EA+  +  M+  G  P+   +  +   +    + G+    F   L +++ V  M   +
Sbjct: 180 SDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKA 239

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +L N V  +  I           A ++  AM+K+G   +   Y+ ++  + +  + +EA 
Sbjct: 240 LLVNFVIQDKAIE----------ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAF 289

Query: 345 RLCDEMVKRGLMP-NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           +L  EM      P NNV + + +  L   G +E A F     + + +      Y +L + 
Sbjct: 290 KLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQA-FEACRTMQESLSSSQPVYDMLIRL 348

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           L  +G + +A +   ++   ++   + + + +I  LCK+  + +A  LL +MI RG  PD
Sbjct: 349 LIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPD 408

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKK--VEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           + T+  LI+  CK   I+ A +  + M +    +  +   YNS++N LCK   +  A ++
Sbjct: 409 MATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAI 468

Query: 522 LQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                S+R  + D ++Y+ LI+G+    ++  A  ++ +M ++    N   YN  +N L 
Sbjct: 469 FSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLM 528

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           + G    A+ + + M+  G  PD +TY+TL+  FS     ++  EL + M+  G  P+  
Sbjct: 529 RKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAV 588

Query: 640 TYNAIISPLLGEKSAED 656
           TYN ++  L  E   ++
Sbjct: 589 TYNCLLHGLCKESKPDE 605


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/582 (26%), Positives = 291/582 (50%), Gaps = 28/582 (4%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIV--HLLVNWRRFDDALLLMGNLMSANSVSPL 129
           K+P+ A   +     +  ++HS     A+V  H+L   RR  +A +          V+ +
Sbjct: 21  KNPRAAFALFDSATRHPGYAHS-----AVVYHHIL---RRLSEARM----------VTHV 62

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK-VKGHSVSIHAWNNFL 188
             +  L+ S E CK    V  ++++   +    + A DV ++++ + G    I ++N  L
Sbjct: 63  GRIVELIRSQE-CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLL 121

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           +  V+  +  +   L+    + G   N+ T+N++I   CK+ + E+A      M K G  
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFK 181

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V  ++ +IN+  + G L+ AL+LF +M   S   V P+   +N +I+GF K    + A
Sbjct: 182 PDVFSYSTVINDLAKTGKLDDALELFDEM---SERRVAPDVTCYNILIDGFLKEKDHKMA 238

Query: 309 EEIRYAMIK-AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
            ++   +++ + +  NV+T+  +I G ++ G  ++ L++ D M +     +   Y+S IH
Sbjct: 239 MQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIH 298

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L  EG+V+ A  V ++++++    D  TY+ +  G CR G +K++ +L  +++E+    
Sbjct: 299 GLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-RIMEQRNSV 357

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  SYNILI  L ++  +  A  +   M  +G   D  TYG  I G C  G +  A+ V 
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVM 417

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           + ++      ++  Y SII+ LCK   L+ A +L++   + G+ L++   N LI G   +
Sbjct: 418 QEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            ++++A  +   M   G     V YNILI  LC+ G + +A   +K M+ +G+ PD  TY
Sbjct: 478 SRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTY 537

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + L+    ++   E  +EL    + SG+ PD   +N +I  L
Sbjct: 538 SILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGL 579



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 239/550 (43%), Gaps = 72/550 (13%)

Query: 132 LEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           +E L   +E     P    ++ L++   +    E A   +  +  +G    + +++  ++
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIN 192

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIW 248
            L K  ++    +L+ EM       +V  +N++I    KE   + A+ L+ ++L+ S ++
Sbjct: 193 DLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVY 252

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKM-----------------------GVMSGDSV 285
           PNV   N++I+   + G ++  LK++ +M                        V   +SV
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESV 312

Query: 286 LP---------NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
                      + VT+N ++ GFC+ G+++ + E+ + +++     N+ +Y  LI G   
Sbjct: 313 FNELVERKAFIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEQRNSVNIVSYNILIKGLLE 371

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G  +EA  +   M  +G   +N  Y   IH L   G V  AL V+ ++  K    D + 
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYA 431

Query: 397 YSILTKGLCRNGCVKQAFKL------HNQVLEEHM-------------VGDA-------- 429
           Y+ +   LC+   +++A  L      H   L  H+             + DA        
Sbjct: 432 YASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMG 491

Query: 430 --------YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                    SYNILI  LC++     A   +  M+  GL PD+ TY  L+ G C+   IE
Sbjct: 492 KNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIE 551

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLI 540
            A++++    +   +P+++++N +I+GLC    LD A +++     R    + +TYNTL+
Sbjct: 552 LALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            GYF       A  ++  M  +G+  + + YN ++  LC       A E       HGI 
Sbjct: 612 EGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIF 671

Query: 601 PDYVTYTTLV 610
           P   T+  LV
Sbjct: 672 PTVYTWNILV 681



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 187/390 (47%), Gaps = 7/390 (1%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL +F++M  + G    P   ++N ++N F +  +    E +      AG+  N++TY  
Sbjct: 97  ALDVFKRMREIFG--CEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    +    E+A    + M K G  P+   Y++ I+ L   G ++ AL +  +M ++ 
Sbjct: 155 LIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERR 214

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV-GDAYSYNILINYLCKSNNLAAA 448
           + PD   Y+IL  G  +    K A +L +++LE+  V  +  ++NI+I+ L K   +   
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP--NLVIYNSII 506
            ++   M       D+ TY +LI G C  GN++ A  V+  +  VE+K   ++V YN+++
Sbjct: 275 LKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNEL--VERKAFIDVVTYNTML 332

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            G C+   +  +  L +  ++   ++ ++YN LI G   NGKI EA  ++  M   G A 
Sbjct: 333 GGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y I I+ LC  G   +A  +M+ +   G   D   Y +++    K    EE   L 
Sbjct: 393 DNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV 452

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            +M   GV  ++   NA+I  L+ +    D
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLSD 482



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 226/494 (45%), Gaps = 26/494 (5%)

Query: 52  EQMAPSLT--NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR 109
            ++AP +T  N L++  + E  K  K+A++ +  + E++    ++++   ++  L    R
Sbjct: 213 RRVAPDVTCYNILIDGFLKE--KDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGR 270

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
            DD L +  + M  N        E   D Y         + +L+      G  + A  V 
Sbjct: 271 VDDCLKIW-DRMKQN--------EREKDLY--------TYSSLIHGLCDEGNVDKAESVF 313

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
            +L  +   + +  +N  L    +  +I    +L++ M     V N+ ++N++I  L + 
Sbjct: 314 NELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLEN 372

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            K++EA  ++  M   G   +   + + I+  C  G +  AL + +++    G     + 
Sbjct: 373 GKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGH---LDV 429

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
             +  II+  CK  R+E A  +   M K G++ N      LI G  R     +A  L   
Sbjct: 430 YAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRG 489

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M K G +P  V YN  I  L   G    A   + +M++  + PD  TYSIL  GLCR+  
Sbjct: 490 MGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRK 549

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++ A +L +Q L+  +  D   +NILI+ LC    L  A  ++++M  R    +++TY T
Sbjct: 550 IELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L++GY K  +   A  ++  M K+  +P+++ YN+I+ GLC    +  A      ++  G
Sbjct: 610 LMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHG 669

Query: 530 LLDAI-TYNTLING 542
           +   + T+N L+  
Sbjct: 670 IFPTVYTWNILVRA 683


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 221/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL      FR    M    V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLNEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K + PD FTY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++   KP++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVV 417



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 150/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G   E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  MI++GL PD  TY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A  L   M+ +GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D  TY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 150/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
                + + M    + PD +TYS+L  GLC+   +  A  L +++L++ +V +  ++  L
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+   Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G  P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 126/228 (55%), Gaps = 1/228 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y +NIL++   K   +  A+ +  ++   GL P ++++ TL++GY K G++    ++   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M+    +P++  Y+ +INGLCK++ +D A  L       GL+ + +T+ TLI+G+  NG+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +  A  ++ +M +  ++ + + YN LI  LCK G  +QA++L+  MI+ G+ PD  TYTT
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    K    E   E    M+   +  D+  Y A+IS L  E  + D
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A  +++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K  Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
 gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
          Length = 818

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 160/588 (27%), Positives = 287/588 (48%), Gaps = 45/588 (7%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           + H L+  RR+      +  L++   S S     + L + +  C +   V+DAL  +  +
Sbjct: 104 LCHELLRERRWRAMRAALAQLVTEQGSGSAAALCDILWNRFRECDSNGCVWDALANSYAR 163

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
                 A  V+ K+      +S+  +++ L H +++ ++    +L++EM SCG   +  +
Sbjct: 164 AQMVHDALYVLSKMSSLNMQISVFTYDSLL-HGLRMTDVA--LELFEEMESCGVSPSEYS 220

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +++I  LCK+ K+ EALS      K G + P  + FN++++  C  G ++ A K F  +
Sbjct: 221 HSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSA-KSF--L 277

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            +M    ++P+  T + +I+G CK+G +E A ++   + K G++  + TY +LI+GY   
Sbjct: 278 CLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLL 337

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G ++E  ++   M  +G+ P+ V Y   I      GDVE  + V  D++D+ +  +  TY
Sbjct: 338 GLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTY 397

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM-- 455
           S+L   L + G   +   L  ++    +  D  +Y+ILI+  CK   +  A Q+ ++M  
Sbjct: 398 SVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCS 457

Query: 456 ---------------------------------IVRGLIP-DIITYGTLIDGYCKGGNIE 481
                                            + R   P D++ Y  +IDGY K G+I 
Sbjct: 458 SQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIV 517

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            AV++Y+ +      P +V  NS++ G CK   L  A+S  +A Q  GLL  A+TY TL+
Sbjct: 518 NAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLM 577

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +     G++    ++F EM    I  N V Y++++  LCK   + +A  ++K M   GI 
Sbjct: 578 DALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGIN 637

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            D +TY TL+  F ++ + +    +HD M+  G+ P   TYN +I+ L
Sbjct: 638 ADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVL 685



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/512 (23%), Positives = 225/512 (43%), Gaps = 52/512 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L+    ++G+ E A D+ +++  +G  + I  +N+ ++    L       K+ + M
Sbjct: 291 TFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMM 350

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA------ 261
              G   ++ T+ ++I   C+   +EE + +   +L  G+  N+V +++++N        
Sbjct: 351 RGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMF 410

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG-- 319
           C++ +L         +G +    +  + + ++ +I+G+CKLG +E A ++  AM  +   
Sbjct: 411 CEIDNL---------LGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRV 461

Query: 320 ----------------------------------IDCNVRTYATLIDGYARGGSSEEALR 345
                                                +V  Y  +IDGYA+ G    A+R
Sbjct: 462 MPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVR 521

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L D++   G+ P  V  NS ++     GD++ A      +    + P   TY+ L   L 
Sbjct: 522 LYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALS 581

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
             G V     L ++++ + +  +A +Y++++  LCK      A  +L  M  +G+  D I
Sbjct: 582 EAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPI 641

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY TLI G+C+  N++ A  +++ M      P  V YN +IN LC    +  A+ LL++ 
Sbjct: 642 TYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESL 701

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           +  G+ L    Y TLI      G    A  +  ++ + G   +   ++  IN LCK    
Sbjct: 702 RENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFA 761

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           ++A   + +M+  GI PD   Y  L     KN
Sbjct: 762 KEAFMFVPIMLSVGIYPDTQIYCVLGRALQKN 793


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 209/415 (50%), Gaps = 4/415 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++A++ +YRM+     P+ V     +    +       + L  +M +     V  N  T
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFG---VAHNDYT 123

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN  C+L  + FA  +   M K GI  +  T+ TLI+G    G  +EA+ L +EM 
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            R  MPN V +   +  L  +G V  A  V   M +K + P+ +TY+ L  G C    + 
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A K+   ++ +      +SY+ILIN  CKS  +  AK LL+ M  + LIP+ +TY TL+
Sbjct: 244 DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLM 303

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
            G C   ++  A ++++ M      PNL  Y+ +++GLCK   L+ A  LL + Q   L 
Sbjct: 304 QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE 363

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D + YN LI G FI GK+  A  +FS++   GI  +   YNI+I  L K G   +A +L
Sbjct: 364 PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            + M   G +PD  +Y  ++  F +N  P   I+L D+MV    S D+ T+  ++
Sbjct: 424 FRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 201/392 (51%), Gaps = 4/392 (1%)

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
           FL  + K  +      L  +M   G   N  T N++I +LC+   +  A+S+  +M K G
Sbjct: 92  FLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLG 151

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I P+ V F  +IN  C  G ++ A++LF +   M+G   +PN+VT   +++  CK G V 
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNE---MAGRDAMPNTVTFTILVDVLCKKGMVS 208

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A  +   M + G++ N+ TY  L++GY       +A ++ + MV +G  P+   Y+  I
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +       ++ A  +L+ M +K + P+  TY+ L +GLC    + +A +L  ++    M+
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  +Y+IL++ LCK  +L  A +LL+SM  R L PDI+ Y  LI G    G +E A ++
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFI 545
           +  +     +P++  YN +I GL K+   D A  L +  +  G L D+ +YN +I G+  
Sbjct: 389 FSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQ 448

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           N   + A  +  EM     + +   + +L++ 
Sbjct: 449 NQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL 480



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 176/361 (48%), Gaps = 4/361 (1%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           +  N  ++ L +L+ I     +  +M   G   +  TF  +I  LC E +++EA+ L+  
Sbjct: 122 YTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNE 181

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M      PN V F ++++  C+ G +  A  +F     M+   V PN  T+N ++NG+C 
Sbjct: 182 MAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFE---TMTEKGVEPNIYTYNALMNGYCL 238

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
              +  A ++   M+  G   +V +Y+ LI+GY +    +EA  L  +M ++ L+PN V 
Sbjct: 239 RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ +  L     +  A  +   M    + P+  TYSIL  GLC++G +++A KL   + 
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E  +  D   YNILI  +  +  L  AK+L S +   G+ P + TY  +I G  K G  +
Sbjct: 359 ERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSD 418

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLI 540
            A +++  M+     P+   YN II G  ++     A  L+ +   R    D+ T+  L+
Sbjct: 419 EAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478

Query: 541 N 541
           +
Sbjct: 479 D 479



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 162/334 (48%), Gaps = 35/334 (10%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           KL ++  SV+   +   ++ L     I    +L+ EM     + N  TF +++  LCK+ 
Sbjct: 149 KLGIQPDSVT---FTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG 205

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM------------- 277
            + EA  ++  M + G+ PN+  +N ++N  C   ++  A K+F  M             
Sbjct: 206 MVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYS 265

Query: 278 -------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
                                MS   ++PN+VT+N ++ G C    +  A+E+   M  +
Sbjct: 266 ILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSS 325

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  N+RTY+ L+DG  + G  EEAL+L   M +R L P+ V+YN  I  +F  G +E A
Sbjct: 326 GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVA 385

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             + S +    I P   TY+I+ KGL + G   +A+KL  ++ ++  + D+ SYN++I  
Sbjct: 386 KELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQG 445

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
             ++ + + A QL+  M+ R    D  T+  L+D
Sbjct: 446 FLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 119/220 (54%), Gaps = 1/220 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y+ NILIN LC+ +++  A  +LS M   G+ PD +T+ TLI+G C  G I+ AV+++  
Sbjct: 122 YTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNE 181

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGK 548
           M   +  PN V +  +++ LCK   +  A+ + +     G+   I TYN L+NGY +  +
Sbjct: 182 MAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLE 241

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +A  +F  M   G A +   Y+ILIN  CK     +A+ L+  M    +IP+ VTY T
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           L+       S  E  EL   M  SG+ P+ +TY+ ++  L
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGL 341



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 1/186 (0%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P  +  G  +    K       V +   M       N    N +IN LC+ + +  A S+
Sbjct: 84  PSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSV 143

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           L    ++G+  D++T+ TLING    G+I EA  +F+EM       N V + IL++ LCK
Sbjct: 144 LSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCK 203

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +AR + + M   G+ P+  TY  L+  +       +  ++ + MV  G +P   +
Sbjct: 204 KGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHS 263

Query: 641 YNAIIS 646
           Y+ +I+
Sbjct: 264 YSILIN 269



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%)

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           ++M   G+A N    NILIN LC+      A  ++  M   GI PD VT+TTL+      
Sbjct: 110 NQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNE 169

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              +E +EL ++M      P+  T+  ++  L
Sbjct: 170 GRIKEAVELFNEMAGRDAMPNTVTFTILVDVL 201


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 251/511 (49%), Gaps = 25/511 (4%)

Query: 145 TPA-VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           TPA     LV A +Q+G  + A  V ++L+      ++ A N  L  LVK    G  W+L
Sbjct: 117 TPAPALGVLVIALSQMGLLDEALYVFRRLRTLP---ALPACNAVLDGLVKARRPGCAWEL 173

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EM+  G V +V T+N +I A   +  + +A  ++ +M+   I PNVV +  +I   C+
Sbjct: 174 FDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCE 233

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G +  A +LF     M    + PN  T+N +++G C+   V  A  +   ++K+G++ N
Sbjct: 234 EGCIGDAERLF---DAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPN 290

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
              + TLIDG+ +     EA  +  EM + G+ P   VYNS +   F  G+ + AL +  
Sbjct: 291 AVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQ 350

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M    +CPD FT SI+ +GLC  G +  A +    V E+ +  +A +YN LI+  C+  
Sbjct: 351 EMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIG 410

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           NL  A    + M   G+ P++++Y +LIDG+ K G ++ A+ +Y  M     +PN+V Y 
Sbjct: 411 NLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYT 470

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G  K+  +DAA  L +     G+  +AIT + L++G     ++ EA     E   +
Sbjct: 471 ALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGL 530

Query: 563 G-----------------IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
                             +  N V Y  LI  L   G + +A +L   M   G+IPD  T
Sbjct: 531 KCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFT 590

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           YT L+            + L+ DM+  GV P
Sbjct: 591 YTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 201/397 (50%), Gaps = 7/397 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q+G L+ AL +FR++        LP     N +++G  K  R   A E+   M++ G+  
Sbjct: 131 QMGLLDEALYVFRRL------RTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVP 184

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY TLI+     G+  +A  + D+MV + + PN V Y + I  L  EG +  A  + 
Sbjct: 185 SVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF 244

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +  + P+ +TY++L  G C+   V  A  L+ ++L+  +  +A  +  LI+  CK+
Sbjct: 245 DAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKA 304

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + AK +   M   G+ P +  Y +L+DG  + GN + A+ +Y+ M ++   P+    
Sbjct: 305 KRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTC 364

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           + ++ GLC    +  A   LQ  Q  G+ L+A  YN LI+ Y   G + EA A  + M  
Sbjct: 365 SIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTE 424

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           VGI  N V Y+ LI+   K G  Q A  +   M+  GI P+ VTYT L+   +KN   + 
Sbjct: 425 VGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDA 484

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              LH +M+ +G+SP+  T + ++  L  E   ++ V
Sbjct: 485 AFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAV 521



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A ++AL+    +IG  E A     ++   G   ++ ++++ +    K  ++     +Y E
Sbjct: 397 AAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTE 456

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV+ G   NV T+  +I+   K   ++ A  L+  M+++GI PN +  +++++  C+   
Sbjct: 457 MVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENR 516

Query: 267 LEFALKLFRKMG--------------VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
           ++ A++   +                 +  + ++PNSV +  +I G    G+   A ++ 
Sbjct: 517 VQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLF 576

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
             M K+G+  +  TY  LI G    G    A+ L  +M+K G+ P          W +A
Sbjct: 577 SYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRYKIECPEIWSWA 635


>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 811

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 160/588 (27%), Positives = 287/588 (48%), Gaps = 45/588 (7%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           + H L+  RR+      +  L++   S S     + L + +  C +   V+DAL  +  +
Sbjct: 104 LCHELLRERRWRAMRAALAQLVTEQGSGSAAALCDILWNRFRECDSNGCVWDALANSYAR 163

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
                 A  V+ K+      +S+  +++ L H +++ ++    +L++EM SCG   +  +
Sbjct: 164 AQMVHDALYVLSKMSSLNMQISVFTYDSLL-HGLRMTDVA--LELFEEMESCGVSPSEYS 220

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +++I  LCK+ K+ EALS      K G + P  + FN++++  C  G ++ A K F  +
Sbjct: 221 HSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGFVQSA-KSF--L 277

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            +M    ++P+  T + +I+G CK+G +E A ++   + K G++  + TY +LI+GY   
Sbjct: 278 CLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLL 337

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G ++E  ++   M  +G+ P+ V Y   I      GDVE  + V  D++D+ +  +  TY
Sbjct: 338 GLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTY 397

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM-- 455
           S+L   L + G   +   L  ++    +  D  +Y+ILI+  CK   +  A Q+ ++M  
Sbjct: 398 SVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCS 457

Query: 456 ---------------------------------IVRGLIP-DIITYGTLIDGYCKGGNIE 481
                                            + R   P D++ Y  +IDGY K G+I 
Sbjct: 458 SQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIV 517

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            AV++Y+ +      P +V  NS++ G CK   L  A+S  +A Q  GLL  A+TY TL+
Sbjct: 518 NAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLM 577

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +     G++    ++F EM    I  N V Y++++  LCK   + +A  ++K M   GI 
Sbjct: 578 DALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGIN 637

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            D +TY TL+  F ++ + +    +HD M+  G+ P   TYN +I+ L
Sbjct: 638 ADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVL 685



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 225/511 (44%), Gaps = 52/511 (10%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+    ++G+ E A D+ +++  +G  + I  +N+ ++    L       K+ + M 
Sbjct: 292 FSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMR 351

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA------C 262
             G   ++ T+ ++I   C+   +EE + +   +L  G+  N+V +++++N        C
Sbjct: 352 GQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFC 411

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--- 319
           ++ +L         +G +    +  + + ++ +I+G+CKLG +E A ++  AM  +    
Sbjct: 412 EIDNL---------LGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVM 462

Query: 320 ---------------------------------IDCNVRTYATLIDGYARGGSSEEALRL 346
                                               +V  Y  +IDGYA+ G    A+RL
Sbjct: 463 PTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRL 522

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D++   G+ P  V  NS ++     GD++ A      +    + P   TY+ L   L  
Sbjct: 523 YDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSE 582

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V     L ++++ + +  +A +Y++++  LCK      A  +L  M  +G+  D IT
Sbjct: 583 AGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPIT 642

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLI G+C+  N++ A  +++ M      P  V YN +IN LC    +  A+ LL++ +
Sbjct: 643 YNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLR 702

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+ L    Y TLI      G    A  +  ++ + G   +   ++  IN LCK    +
Sbjct: 703 ENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAK 762

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           +A   + +M+  GI PD   Y  L     KN
Sbjct: 763 EAFMFVPIMLSVGIYPDTQIYCVLGRALQKN 793



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 3/301 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V  +N+VI    K   +  A+ LY ++  +G+ P +V  N ++   C++GDL+ A   F
Sbjct: 499 DVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYF 558

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R +  +SG  +LP +VT+  +++   + G V     +   M+   I  N  TY+ ++ G 
Sbjct: 559 RAIQ-LSG--LLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGL 615

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            +    +EA+ +  +M  +G+  + + YN+ I       +V+ A  +   M+ + + P  
Sbjct: 616 CKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP 675

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY++L   LC  G V QA  L   + E  +    ++Y  LI   C       A  L+  
Sbjct: 676 VTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGK 735

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           ++  G    I  +   I+  CK    + A      M  V   P+  IY  +   L K++ 
Sbjct: 736 LLDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQKNSE 795

Query: 515 L 515
           L
Sbjct: 796 L 796


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 233/453 (51%), Gaps = 14/453 (3%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +LY  M S     +  + + ++ AL        A +L+  M +  +      FN+++   
Sbjct: 438 RLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHL 493

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGI 320
           C  G    AL+L R+M         PN+VT+N +I GFC  GRV+ A +I   M  + GI
Sbjct: 494 CSAGKPARALELLRQM-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGI 546

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGAL 379
             N  TY T+I G+ + G  +EA+++ DEM+ +G + P  V+YN+ I     +G ++ AL
Sbjct: 547 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 606

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M+++ +     TY++L   L  +G   +A++L  ++  + +  D ++YNILIN  
Sbjct: 607 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 666

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK  N+  A ++  +M  RG+   ++TY  LI    K G ++   ++++   +   +P+L
Sbjct: 667 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 726

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V+YN++IN      ++D A  ++   ++  +  D +TYNTL+ G  + G++ EA  +  E
Sbjct: 727 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 786

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   GI  + V YN LI+     G  + A  +   M+  G  P  +TY  L+    KN  
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            ++   +  +MV +G++PD+ TY ++I  L  E
Sbjct: 847 GDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 7/371 (1%)

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           + T N ++   C  G+   A E+   M +     N  TY T+I G+   G  + AL +  
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 349 EMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCR 406
           EM +RG + PN   Y + I      G V+ A+ V  +M+ K  + P+   Y+ L  G C 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A    ++++E  +     +YN+L++ L        A +L+  M  +GL PD+ T
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI+G+CK GN++ A++++ENM +   +  +V Y ++I  L K   +     L   + 
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R G+  D + YN LIN +  +G I  AF +  EM    IA + V YN L+  LC  G   
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +AR+L+  M   GI PD VTY TL++ +S     ++ + + ++M+  G +P   TYNA+I
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838

Query: 646 SPLLGEKSAED 656
             L      +D
Sbjct: 839 QGLCKNGQGDD 849



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 194/372 (52%), Gaps = 15/372 (4%)

Query: 160 GATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVN 217
           G  + A D++++++ +G  + + + +   +S   K+  +    K++ EM++ G V+    
Sbjct: 528 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 587

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +N +I   C + KL+ AL    RM++ G+   V  +N++++     G    A +L  +M
Sbjct: 588 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 647

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           G   G  + P+  T+N +ING CK G V+ A EI   M + G+   V TY  LI   ++ 
Sbjct: 648 G---GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 704

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +E  +L DE V+RG+ P+ V+YN+ I+     G+++ A  ++ +M  K I PD  TY
Sbjct: 705 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 764

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L +GLC  G V +A KL +++ E  +  D  +YN LI+      ++  A ++ + M+ 
Sbjct: 765 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 824

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD----- 512
           +G  P ++TY  LI G CK G  + A  + + M +    P+   Y S+I GL  +     
Sbjct: 825 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 884

Query: 513 -----ASLDAAK 519
                A+ DAAK
Sbjct: 885 DDERLAAADAAK 896


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 221/434 (50%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVG--ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSXPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           + ++    ++   VF  L+ A  + G    A +  +        V        L HL+KL
Sbjct: 61  IXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++GDL+     FR    M    V P+  T++ +ING CK  + + A E+   
Sbjct: 181 NTLMNGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N   + TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD
Sbjct: 238 MLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  ++ +M  K + PD  TY+ L  G C+ G +  AF+   ++++E+   D   Y  
Sbjct: 298 LKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC       A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++  
Sbjct: 358 LISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 417

Query: 495 KKPNLVIYNSIING 508
             P++V YN ++NG
Sbjct: 418 HVPSVVTYNVLMNG 431



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 154/300 (51%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN  CK +    A +L   M+V+GL+P+ + +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSX 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M      ++ V Y  LI+ LC  G    
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +ING CK++  D A  L       GL
Sbjct: 184 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + + + TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 244 VPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M   G+ PD +TYTTL+    K    +   E    M+      D   Y A+IS L 
Sbjct: 304 LIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 XEGRSVD 370



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E        +   ++ +L K           
Sbjct: 71  DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K  +A  +F EM   G+  N V +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   + PD +TY TL+    K    ++   L D+M  
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSX 310

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 311 KGLKPDKITYTTLI 324


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 240/450 (53%), Gaps = 5/450 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L + M S G   +V T+  +I  LC   ++++A+ L   M +SGI PNVV ++ ++   C
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  E   K+F +M   S   + P+ V +  +I+  CK+G+ + A  +   M++ G++ 
Sbjct: 197 KSGRWEDVGKVFVEM---SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY  LI+   + GS +EA+ +  +M ++G+ P+ V YN+ I  L    +++ A+++L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 383 SDMI-DKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
            +M+  K+I  P+  T++ + +GLC  G ++QAF++   + E   + +  +YN+LI  L 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           + + +  A +L+  M   GL PD  TY  LI G+CK   ++ A  +   M+    +P L 
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            Y  ++  +C+   ++ A++L         LD + Y+T+I+G    G +  A  +   + 
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           + G+  + V Y+I+IN   K G  + A  ++K M   G +PD   + +L+  +S      
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +V+EL  +M+   ++ D++  + + + L+ 
Sbjct: 554 KVLELIREMITKNIALDSKIISTLSTSLVA 583



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 234/481 (48%), Gaps = 7/481 (1%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L+ +  C+     +  L+RA       + A  +++ ++  G    +  +   +  L    
Sbjct: 105 LEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAA 164

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           E+ +  +L  EM   G   NV  ++ ++   CK  + E+   ++  M + GI P+VV + 
Sbjct: 165 EVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYT 224

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I+  C+VG    A K    M +M    + PN VT+N +IN  CK G V+ A  +   M
Sbjct: 225 GLIDSLCKVGK---AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV--KRGLMPNNVVYNSTIHWLFAEG 373
            + G+  +V TY TLI G +     +EA+ L +EMV  K  + PN V +NS I  L   G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +  A  V + M +     +  TY++L  GL R   V++A +L +++    +  D+++Y+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ILI   CK   +  A+ LLS+M  RG+ P++  Y  L+   C+ G +E A  ++  M   
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN- 460

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
               ++V Y+++I+G CK   L  AK LL++    GL  DA+TY+ +IN +  +G +  A
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAA 520

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  +M   G   +   ++ LI      G   +  EL++ MI   I  D    +TL T 
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTS 580

Query: 613 F 613
            
Sbjct: 581 L 581



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 217/434 (50%), Gaps = 20/434 (4%)

Query: 108 RRFDDALLLMGNLMSA----NSVSPLEFLEGLLDSYEICKATP--------------AVF 149
           R  D A+ L+ ++ SA    + V+    + GL D+ E+ KA                 V+
Sbjct: 129 RLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY 188

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
            +L++   + G  E    V  ++  KG    +  +   +  L K+ +  +   +   MV 
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   NV T+N++I  +CKE  ++EA+ +  +M + G+ P+VV +N +I     V +++ 
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+ L  +M V   + V PN VT N +I G C +GR+  A ++R  M + G   N+ TY  
Sbjct: 309 AMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNL 367

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI G  R     +A+ L DEM   GL P++  Y+  I        V+ A  +LS M D+ 
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I P+ F Y  L   +C  G +++A  L N+ ++ +   D  +Y+ +I+  CK+ +L  AK
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAK 486

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +LL S++  GL PD +TY  +I+ + K G++E A  V + M      P++ +++S+I G 
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546

Query: 510 CKDASLDAAKSLLQ 523
                ++    L++
Sbjct: 547 STKGEINKVLELIR 560



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 37/434 (8%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           + V +N ++   C+ G  + A  L R M +    +  PN+V++  ++   C     + A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +  +M  AG+  +V TY TLI G       ++A+ L  EM + G+ PN VVY+S +   
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G  E    V  +M +K I PD   Y+ L   LC+ G  K+A  + + ++   +  + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YN+LIN +CK  ++  A  +L  M  +G+ PD++TY TLI G      ++ A+ + E 
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 490 MKKVEK--KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFIN 546
           M + +   KPN+V +NS+I GLC    +  A  +    +  G +++ +TYN LI G    
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP----- 601
            K+ +A  +  EM ++G+  +   Y+ILI   CK     +A +L+  M   GI P     
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 602 -----------------------------DYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
                                        D V Y+T++    K    +   EL   +V  
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 633 GVSPDNQTYNAIIS 646
           G++PD  TY+ +I+
Sbjct: 496 GLTPDAVTYSIVIN 509



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 4/227 (1%)

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR---GLIPDIITYGTLIDGYCKGGNIEG 482
           V DA SYN ++  LC+  +   A  LL +M +       P+ ++Y  L+   C     + 
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           AV +  +M+    + ++V Y ++I GLC  A +D A  L+      G+  + + Y++L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           GY  +G+  +   +F EM   GI  + V Y  LI+ LCK G  ++A  +M +M+  G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + VTY  L+    K  S +E I +   M   GV+PD  TYN +I  L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 165/380 (43%), Gaps = 49/380 (12%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           D+L  +G    A+ V  +    GL       +     ++ L+    + G+ + A  V++K
Sbjct: 228 DSLCKVGKAKKAHGVMDMMVRRGL-------EPNVVTYNVLINCMCKEGSVKEAIGVLKK 280

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV--ENVNTFNLVIYALCKE 229
           +  KG +  +  +N  +  L  + E+     L +EMV    +   NV TFN VI  LC  
Sbjct: 281 MSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDI 340

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            ++ +A  +   M ++G   N+V +N++I    +V  +  A++L   M  M+   + P+S
Sbjct: 341 GRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL---MDEMTSLGLEPDS 397

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGID---------------------------- 321
            T++ +I GFCK+ +V+ AE++   M   GI+                            
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 322 ------CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
                  +V  Y+T+I G  + G  + A  L   +V  GL P+ V Y+  I+     GD+
Sbjct: 458 MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDM 517

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           E A  VL  M      PD   +  L +G    G + +  +L  +++ +++  D+   + L
Sbjct: 518 EAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577

Query: 436 INYLCKSNNLAAAKQLLSSM 455
              L  SN     K LL S+
Sbjct: 578 STSLVASNE---GKALLQSL 594



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK---KPNLVIYNSIINGLCKDASLDA 517
           + D ++Y T++   C+ G+ + A  +   M        +PN V Y  ++  LC D   D 
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  LL++ +  G+  D +TY TLI G     ++ +A  +  EM   GI  N V Y+ L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             CK G ++   ++   M   GI PD V YT L+    K    ++   + D MV  G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 637 DNQTYNAIISPLLGEKSAEDQV 658
           +  TYN +I+ +  E S ++ +
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAI 275



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 130/288 (45%), Gaps = 37/288 (12%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            LE ++    I K     F+++++    IG    A+ V   ++  G  V++  +N  +  
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP- 249
           L++++++ +  +L  EM S G   +  T++++I   CK  +++ A  L   M   GI P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 250 ---------------------------------NVVCFNMIINEACQVGDLEFALKLFRK 276
                                            +VV ++ +I+ AC+ GDL+ A +L + 
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKS 491

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +     + + P++VT++ +IN F K G +E A  +   M  +G   +V  + +LI GY+ 
Sbjct: 492 I---VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            G   + L L  EM+ + +  ++ + ++    L A  + +  L  L D
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTLSTSLVASNEGKALLQSLPD 596


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 167/655 (25%), Positives = 304/655 (46%), Gaps = 23/655 (3%)

Query: 12  SNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKI---LEQMAPSLTNSLVNRVVS 68
           S+ P S  F     F N     +VF+ + +      W     L ++A +L    V+++++
Sbjct: 25  SSVPTSYPFPKTTPFPN-----LVFKVLDLISTDPHWPKNPELNRLASTLRPHHVSKIIN 79

Query: 69  EFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDA----LLLMGNLMSAN 124
               +   AL+F+ W+ + + + H +    ++++ LV  +    A    +L++    + +
Sbjct: 80  THINT-DTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNED 138

Query: 125 SVSPL-EFLEGLLDSYE-ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
            +  + +FL G+  S   +   T   F+ L+    +      A +V  ++   G   S+ 
Sbjct: 139 ELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLL 198

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  ++ L K  ++     ++ ++       +  T+  +I   C+  KL++A  ++ RM
Sbjct: 199 TFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM 258

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           +K G  PN V ++ +IN  C  G +  A+ +  +M   +   + P   T+   I+  C +
Sbjct: 259 VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEM---TEKGIEPTVYTYTVPISSLCDI 315

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GRV+ A  +  +M K G   +V+TY  +I G  R G  E A+ +  +M+K GL+PN V Y
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTY 375

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ I+ L  EG    AL +   M       +  TY+ + KGL     +++A  + N++L+
Sbjct: 376 NALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLK 435

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           +       +YN LI    K   L  A + L  M      PD  TY  LI G+CKGG ++ 
Sbjct: 436 DGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDS 495

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLIN 541
           A   +  M K    PN   Y ++I+G CK+  +D A SL +  +  G   +I TYN +I+
Sbjct: 496 ATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIIS 555

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G     + +EA    ++M   G+  N + Y  LIN LCK      A ++   M     +P
Sbjct: 556 GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP 615

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  TYT+L+    +    E  ++  + +  +G  P   TY+ ++S L  E  + +
Sbjct: 616 NAHTYTSLIYGLCQ----EGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNE 666



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 234/515 (45%), Gaps = 8/515 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  L+      G    A D+++++  KG   +++ +   +S L  +  +    
Sbjct: 263 CNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAI 322

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L + M   G   +V T+  +I  L +  K+E A+ +Y++MLK G+ PN V +N +INE 
Sbjct: 323 NLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINEL 382

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G    ALK+F     M G   L N+ T+N II G   +  +E A  +   M+K G  
Sbjct: 383 CTEGRFGIALKIF---DWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
             V TY TLI    + G    A R    M +    P+   Y   I      G ++ A   
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSF 499

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M+   I P+ +TY+ +  G C+ G +  A  L  ++ E        +YN +I+ L K
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSK 559

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            N  + A++  + M  +GL P+ ITY +LI+G CK      A +++  M+K    PN   
Sbjct: 560 GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHT 619

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y S+I GLC++  +DAA+ L +     G    I TY+TL++G    G+  EA  +   M+
Sbjct: 620 YTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMK 675

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G++ +   Y  L+   CK      A E+  +M + G  P    Y  L+         E
Sbjct: 676 EKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAE 735

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           E + +   ++    + D   +  ++  LL E  ++
Sbjct: 736 EALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSD 770



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 214/479 (44%), Gaps = 47/479 (9%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   + A++    + G  E A  +  K+  +G   +   +N  ++ L      G   
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K++  M   G + N  T+N +I  L     +E+A+ ++ +MLK G  P VV +N +I E 
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A    R + +M   +  P+  T+  +I+GFCK G+++ A    Y M+K GI 
Sbjct: 453 LKRGYLNNAT---RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGIS 509

Query: 322 CNVRTYATLIDGY-----------------------------------ARGGSSEEALRL 346
            N  TY  +IDGY                                   ++G    EA + 
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
           C +M ++GL PN + Y S I+ L        A  +  +M  K+  P+  TY+ L  GLC+
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V  A +L     E  +  D YS   L++ LC+      A QL+ +M  +GL P +  
Sbjct: 630 EGKVDAAERLTENGCEPTI--DTYS--TLVSGLCREGRSNEASQLVENMKEKGLSPSMEI 685

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-S 525
           Y +L+  +CK   ++ A++++  M     +P+L IY  +I  LC  +  + A ++ Q+  
Sbjct: 686 YCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLL 745

Query: 526 QRIGLLDAITYNTLINGYFING--KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           ++    D I +  L++G    G   +   F    E RN   +++   Y IL   L K G
Sbjct: 746 KKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHT--YIILARELSKVG 802



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 215/503 (42%), Gaps = 44/503 (8%)

Query: 22  VGKQFANPSTEDI------VFRA----ICVNLRQRKWKILEQMAPSLT--NSLVNRVVSE 69
           +GK+  +PS +        +FRA    + + +  +  K  E + P+    N+L+N + +E
Sbjct: 328 MGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLK--EGLVPNTVTYNALINELCTE 385

Query: 70  FRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL 129
            R    +AL+ + W+  +   +++ ++   I+  L      + A+++  N M  +  SP 
Sbjct: 386 GRFG--IALKIFDWMEGHGTLANA-QTYNQIIKGLFGMDDIEKAMVVF-NKMLKDGPSPT 441

Query: 130 E------FLEGLLDSY-------------EICKATPAVFDALVRACTQIGATEGAYDVIQ 170
                   +E L   Y               C+     +  L+    + G  + A     
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           ++   G S +   +   +    K  +I     L++ M   G   ++ T+N +I  L K  
Sbjct: 502 EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN 561

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +  EA     +M + G+ PN + +  +IN  C+      A K+F +M      + LPN+ 
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM---EKKNCLPNAH 618

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+  +I G C+ G+V+ AE     + + G +  + TY+TL+ G  R G S EA +L + M
Sbjct: 619 TYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENM 674

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            ++GL P+  +Y S +        V+ AL + + M  K   P  F Y +L   LC     
Sbjct: 675 KEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRA 734

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           ++A  +   +L++    D   + +L++ L +  +     + L  M  R   P + TY  L
Sbjct: 735 EEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIIL 794

Query: 471 IDGYCKGGNIEGAVQVYENMKKV 493
                K G   G  Q+   +++V
Sbjct: 795 ARELSKVGKSIGTDQIGNRLREV 817



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 48/287 (16%)

Query: 382 LSDMIDKHICPD---HFTYSILTKGLCRN--GCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
           +S +I+ HI  D    F Y I  +   ++  GC      + N+++++ ++  A    IL+
Sbjct: 74  VSKIINTHINTDTALQFFYWISKRHFYKHDMGCF---VSMLNRLVKDKILAPADHVRILM 130

Query: 437 NYLCKSNN-LAAAKQLLS--SMIVRGLIP-DIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              C++ + L      L   S    GL    + ++ TL+    K   +  A  VY  +  
Sbjct: 131 IKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFS 190

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
              KP+L+ +N++IN LCK   +  A  +     +  L  DA TY +LI G+  N K+ +
Sbjct: 191 SGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDK 250

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           AF +F  M                    K GC                 P+ VTY+TL+ 
Sbjct: 251 AFEVFDRM-------------------VKDGCN----------------PNSVTYSTLIN 275

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
                    E +++ ++M   G+ P   TY   IS L      +D +
Sbjct: 276 GLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAI 322


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS + K         L+  M  CG   ++ ++N+VI  LC+  +   ALS+ 
Sbjct: 68  SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M+K G  P+VV  + +IN  CQ   +  A+ L  KM  M      P+ V +N II+G 
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM---GFRPDVVIYNTIIDGS 184

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G V  A E+   M + G+  +  TY +L+ G    G   +A RL  +MV R ++PN 
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + + + I     EG    A+ +  +M  + + PD FTY+ L  GLC +G V +A ++ + 
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +  + D  +YN LIN  CKS  +    +L   M  RGL+ D ITY T+I GY + G 
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
            + A +++  M   + +PN+  Y+ ++ GLC +  ++ A  L +  Q+  + LD  TYN 
Sbjct: 365 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I+G    G + +A+ +F  +   G+  + V Y  +I+  C+   + ++  L + M   G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481

Query: 599 IIP 601
           ++P
Sbjct: 482 LLP 484



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 226/434 (52%), Gaps = 5/434 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ +M+    + ++  F+ V+  + K    +  +SL++ M   GI  ++  +N++IN  C
Sbjct: 56  LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +      AL +  KM     +   P+ VT + +INGFC+  RV  A ++   M + G   
Sbjct: 116 RCSRFVIALSVVGKMMKFGYE---PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V  Y T+IDG  + G   +A+ L D M + G+  + V YNS +  L   G    A  ++
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM+ + I P+  T++ +     + G   +A KL+ ++    +  D ++YN LIN LC  
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  AKQ+L  M+ +G +PD++TY TLI+G+CK   ++   +++  M +     + + Y
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           N+II G  +    DAA+ +   S+     +  TY+ L+ G  +N ++ +A  +F  M+  
Sbjct: 353 NTIIQGYFQAGRPDAAQEIF--SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            I ++   YNI+I+ +CK G  + A +L + +   G+ PD V+YTT+++ F +    ++ 
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470

Query: 623 IELHDDMVLSGVSP 636
             L+  M   G+ P
Sbjct: 471 DLLYRKMQEDGLLP 484



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 230/427 (53%), Gaps = 13/427 (3%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           +  P++ D   +  ++I  ++  YD++      ++V G    ++++N  ++ L + +   
Sbjct: 64  RPLPSIVD-FSKVLSKIAKSKN-YDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 121

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               +  +M+  GY  +V T + +I   C+  ++ +A+ L  +M + G  P+VV +N II
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           + +C++G +  A++LF +   M  D V  ++VT+N ++ G C  GR   A  +   M+  
Sbjct: 182 DGSCKIGLVNDAVELFDR---MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            I  NV T+  +ID + + G   EA++L +EM +R + P+   YNS I+ L   G V+ A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L  M+ K   PD  TY+ L  G C++  V +  KL  ++ +  +VGD  +YN +I  
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
             ++    AA+++ S M  R   P+I TY  L+ G C    +E A+ ++ENM+K E + +
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           +  YN +I+G+CK  +++ A  L ++    GL  D ++Y T+I+G+    +  ++  ++ 
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475

Query: 558 EMRNVGI 564
           +M+  G+
Sbjct: 476 KMQEDGL 482



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 209/426 (49%), Gaps = 42/426 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           LEE + L+ +M++S   P++V F+ ++++  +  + +  + LF  M V     +  +  +
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG---IGHDLYS 106

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +IN  C+  R   A  +   M+K G + +V T ++LI+G+ +G    +A+ L  +M 
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + G  P+ V+                                   Y+ +  G C+ G V 
Sbjct: 167 EMGFRPDVVI-----------------------------------YNTIIDGSCKIGLVN 191

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A +L +++  + +  DA +YN L+  LC S   + A +L+  M++R ++P++IT+  +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D + K G    A+++YE M +    P++  YNS+INGLC    +D AK +L      G L
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D +TYNTLING+  + ++ E   +F EM   G+  + + YN +I    + G    A+E+
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              M      P+  TY+ L+     N   E+ + L ++M  S +  D  TYN +I  +  
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428

Query: 651 EKSAED 656
             + ED
Sbjct: 429 IGNVED 434



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 23/401 (5%)

Query: 92  HSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA 151
           H L S   +++ L    RF  AL ++G +M       +  +  L++ +  C+    VFDA
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF--CQGN-RVFDA 158

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +              D++ K++  G    +  +N  +    K+  +    +L+  M   G
Sbjct: 159 I--------------DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+N ++  LC   +  +A  L   M+   I PNV+ F  +I+   + G    A+
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           KL+ +   M+   V P+  T+N +ING C  GRV+ A+++   M+  G   +V TY TLI
Sbjct: 265 KLYEE---MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           +G+ +    +E  +L  EM +RGL+ + + YN+ I   F  G  + A  + S M  +   
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--- 378

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TYSIL  GLC N  V++A  L   + +  +  D  +YNI+I+ +CK  N+  A  L
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             S+  +GL PD+++Y T+I G+C+    + +  +Y  M++
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 6/284 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +A    +++LV      G    A  +++ + ++    ++  +   +   VK  +     K
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LY+EM       +V T+N +I  LC   +++EA  +   M+  G  P+VV +N +IN  C
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++   KLFR+   M+   ++ +++T+N II G+ + GR + A+EI   M       
Sbjct: 326 KSKRVDEGTKLFRE---MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--- 379

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+RTY+ L+ G       E+AL L + M K  +  +   YN  IH +   G+VE A  + 
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             +  K + PD  +Y+ +  G CR     ++  L+ ++ E+ ++
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 1/211 (0%)

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S NL     L   MI    +P I+ +  ++    K  N +  + ++ +M+      +L  
Sbjct: 47  SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +IN LC+ +    A S++    + G   D +T ++LING+    ++ +A  + S+M 
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
            +G   + V YN +I+  CK G    A EL   M   G+  D VTY +LV     +    
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           +   L  DMV+  + P+  T+ A+I   + E
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 250/531 (47%), Gaps = 30/531 (5%)

Query: 106 NWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGA 165
           ++   DDAL     ++      P+     +LDS+   K  P V                 
Sbjct: 40  SFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVS--------------- 84

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
             + ++L++K         N  ++    L +I   + +  +++  GY  +  T   +I  
Sbjct: 85  --LSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKG 142

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LC + ++++AL  + ++L  G   + V +  +IN  C++G+   A++L R+   + G   
Sbjct: 143 LCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRR---IDGRLT 199

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            PN V +N II+  CK   V  A  +   M   GI  NV TY+ +I G+   G   EAL 
Sbjct: 200 EPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALG 259

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
             +EMV + + P+  +YN+ +  L  EG V+ A  VL+ ++   + P+  TY+ L     
Sbjct: 260 FLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLI---- 315

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
            +G  K  F   N V    +  D +SYNI+IN LCK   +  A  L   M  + ++P+ +
Sbjct: 316 -DGYAKHVF---NAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTV 371

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY +LIDG CK G I  A  + + M       N++ YNS+INGLCK+  LD A +L+   
Sbjct: 372 TYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKM 431

Query: 526 QRIGLL-DAITYNTLINGYFINGK-IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
           +  G+  D  T N L++G    GK +  A  +F ++ + G   N   YNI+I   CK G 
Sbjct: 432 KDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGL 491

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
             +A  L   M   G  P+ +T+  ++    +    ++  +L  +M+  G+
Sbjct: 492 LDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 228/483 (47%), Gaps = 33/483 (6%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M+   +   +  FN ++ +  K       +SL  R+    I P+    N++IN  C 
Sbjct: 51  FHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCH 110

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G +  A  +  K+         P++VT   +I G C  G+V+ A      ++  G   +
Sbjct: 111 LGQINLAFSVLSKILKWGYQ---PDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLD 167

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y TLI+G  + G +  A++L   +  R   PN V+YN+ I  L     V  A  + S
Sbjct: 168 QVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFS 227

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K I  +  TYS +  G C  G + +A    N+++ + +  D Y YN L++ L K  
Sbjct: 228 EMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEG 287

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGY---------------------------CK 476
            +  AK +L+ ++   L P++ITY TLIDGY                           CK
Sbjct: 288 KVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCK 347

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAIT 535
              +E A+ +Y+ M +    PN V YNS+I+GLCK   +  A  L+ +   R    + IT
Sbjct: 348 IKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVIT 407

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN-FLCKFGCYQQARELMKVM 594
           YN+LING   NG++ +A A+ ++M++ GI  +    NIL++  LCK    + A+ L + +
Sbjct: 408 YNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDL 467

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  G  P+  TY  ++    K    +E   L   M  SG SP+  T+  II  LL EK  
Sbjct: 468 LDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALL-EKGE 526

Query: 655 EDQ 657
            D+
Sbjct: 527 TDK 529



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 206/419 (49%), Gaps = 12/419 (2%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++AL  ++RML     P ++ FN I++   ++      + L R++ +    ++ P+  T
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLEL---KAIQPDFFT 100

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC LG++  A  +   ++K G   +  T  TLI G    G  ++AL   D+++
Sbjct: 101 LNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            +G   + V Y + I+ +   G+   A+ +L  +  +   P+   Y+ +   LC+   V 
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVS 220

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L +++  + +  +  +Y+ +I+  C    L  A   L+ M+++ + PD+  Y TL+
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D   K G ++ A  V   + K   KPN++ YN++I+G         AK +  A   +G+ 
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVFNAVGLMGVT 332

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  +YN +IN      ++ EA  ++ EM    +  N V YN LI+ LCK G    A +L
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDL 392

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           +  M   G   + +TY +L+    KN   ++ I L + M   G+ PD  T N ++  LL
Sbjct: 393 IDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLL 451



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 193/409 (47%), Gaps = 31/409 (7%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
            L++     G  + A     KL  +G  +   ++   ++ + K+ E     +L + +   
Sbjct: 138 TLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGR 197

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
               NV  +N +I  LCK   + EA +L+  M   GI  NVV ++ II+  C VG L  A
Sbjct: 198 LTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEA 257

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L    +M +    ++ P+   +N +++   K G+V+ A+ +   ++K  +  NV TY TL
Sbjct: 258 LGFLNEMVL---KAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTL 314

Query: 331 IDGYARG---------------------------GSSEEALRLCDEMVKRGLMPNNVVYN 363
           IDGYA+                               EEAL L  EM ++ ++PN V YN
Sbjct: 315 IDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYN 374

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I  L   G +  A  ++ +M D+    +  TY+ L  GLC+NG + +A  L N++ ++
Sbjct: 375 SLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ 434

Query: 424 HMVGDAYSYNILIN-YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
            +  D Y+ NIL++  LCK   L  A+ L   ++ +G  P++ TY  +I G+CK G ++ 
Sbjct: 435 GIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDE 494

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           A  +   M+     PN + +  II  L +    D A+ LL      GLL
Sbjct: 495 AYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 8/247 (3%)

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F+ H  +   H       +N +++   K  +      L   + ++ + PD  T   LI+ 
Sbjct: 49  FQFHRMLCMRH-TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINC 107

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIG 529
           +C  G I  A  V   + K   +P+ V   ++I GLC    +  A      LL    R  
Sbjct: 108 FCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFR-- 165

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
            LD ++Y TLING    G+   A  +   +       N V YN +I+ LCK     +A  
Sbjct: 166 -LDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACN 224

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M + GI  + VTY+ ++  F       E +   ++MVL  ++PD   YN ++  L 
Sbjct: 225 LFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALH 284

Query: 650 GEKSAED 656
            E   ++
Sbjct: 285 KEGKVKE 291



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 19/197 (9%)

Query: 100 IVHLLVNWRRFDDALLLMGNL----MSANSVSPLEFLEGLLDSYEIC------------- 142
           +++ L   +R ++AL L   +    M  N+V+    ++GL  S  I              
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400

Query: 143 -KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV-KLNEIGRF 200
             A    +++L+    + G  + A  +I K+K +G    ++  N  L  L+ K   +   
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNA 460

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             L+++++  GY  NV T+N++IY  CKE  L+EA +L  +M  SG  PN + F +II  
Sbjct: 461 QGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICA 520

Query: 261 ACQVGDLEFALKLFRKM 277
             + G+ + A KL  +M
Sbjct: 521 LLEKGETDKAEKLLCEM 537


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 233/454 (51%), Gaps = 16/454 (3%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +LY  M S     +  + + ++ AL        A +L+  M +  +      FN+++   
Sbjct: 443 RLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHL 498

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGI 320
           C  G    AL+L R+M         PN+VT+N +I GFC  GRV+ A +I   M  + GI
Sbjct: 499 CSAGKPARALELLRQM-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGI 551

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGAL 379
             N  TY T+I G+ + G  +EA+++ DEM+ +G + P  V+YN+ I     +G ++ AL
Sbjct: 552 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 611

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M+++ +     TY++L   L  +G   +A++L  ++  + +  D ++YNILIN  
Sbjct: 612 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 671

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK  N+  A ++  +M  RG+   ++TY  LI    K G ++   ++++   +   +P+L
Sbjct: 672 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 731

Query: 500 VIYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           V+YN++IN      ++D A  ++     +RI   D +TYNTL+ G  + G++ EA  +  
Sbjct: 732 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP-DDVTYNTLMRGLCLLGRVDEARKLID 790

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   GI  + V YN LI+     G  + A  +   M+  G  P  +TY  L+    KN 
Sbjct: 791 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 850

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             ++   +  +MV +G++PD+ TY ++I  L  E
Sbjct: 851 QGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 7/371 (1%)

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           + T N ++   C  G+   A E+   M +     N  TY T+I G+   G  + AL +  
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 349 EMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCR 406
           EM +RG + PN   Y + I      G V+ A+ V  +M+ K  + P+   Y+ L  G C 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A    ++++E  +     +YN+L++ L        A +L+  M  +GL PD+ T
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI+G+CK GN++ A++++ENM +   +  +V Y ++I  L K   +     L   + 
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R G+  D + YN LIN +  +G I  AF +  EM    IA + V YN L+  LC  G   
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +AR+L+  M   GI PD VTY TL++ +S     ++ + + ++M+  G +P   TYNA+I
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 843

Query: 646 SPLLGEKSAED 656
             L      +D
Sbjct: 844 QGLCKNGQGDD 854



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 201/392 (51%), Gaps = 15/392 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIG 198
           ++ +     ++ ++      G  + A D++++++ +G  + + + +   +S   K+  + 
Sbjct: 513 QMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 572

Query: 199 RFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
              K++ EM++ G V+     +N +I   C + KL+ AL    RM++ G+   V  +N++
Sbjct: 573 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 632

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           ++     G    A +L  +MG   G  + P+  T+N +ING CK G V+ A EI   M +
Sbjct: 633 VHALFMDGRGTEAYELVEEMG---GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+   V TY  LI   ++ G  +E  +L DE V+RG+ P+ V+YN+ I+     G+++ 
Sbjct: 690 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  ++ +M  K I PD  TY+ L +GLC  G V +A KL +++ E  +  D  +YN LI+
Sbjct: 750 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 809

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
                 ++  A ++ + M+ +G  P ++TY  LI G CK G  + A  + + M +    P
Sbjct: 810 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 869

Query: 498 NLVIYNSIINGLCKD----------ASLDAAK 519
           +   Y S+I GL  +          A+ DAAK
Sbjct: 870 DDSTYISLIEGLTTEDERAIDDERLAAADAAK 901



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 193/397 (48%), Gaps = 26/397 (6%)

Query: 30  STEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSEF--RKSPKLALEFYTWVGE 86
           +T +I+ R +C      R  ++L QM P       N V++ F  R   + AL+    + E
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 547

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------EGLL 136
               + +  +   ++       R D+A+ +   +++   V P   +          +G L
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607

Query: 137 DSYEICK---------ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           D+  + +          T A ++ LV A    G    AY++++++  KG +  +  +N  
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 667

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           ++   K   + +  ++++ M   G    V T+  +IYAL K+ +++E   L+   ++ GI
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P++V +N +IN     G+++ A   F  MG M    + P+ VT+N ++ G C LGRV+ 
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRA---FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A ++   M + GI  ++ TY TLI GY+  G  ++ALR+ +EM+ +G  P  + YN+ I 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L   G  + A  ++ +M++  I PD  TY  L +GL
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 269/545 (49%), Gaps = 22/545 (4%)

Query: 131 FLEGLLDSYEICKA-------------TPAV--FDALVRACTQIGATEGAYDVIQKL--- 172
            L+GL D+  + +A             TP V  ++ L++        E A +++  +   
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 173 KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           +V+    ++ ++N  ++      ++ + + L+ +M   G   NV T+ +VI  LCK   +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           + A  ++ +M+  G+ PN+V +  +I+    +G  +  +++ ++M   S   + P+  T+
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM---SAHGLEPDCFTY 312

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             +++  CK G+   A ++  +MI+ GI  +V  Y  ++ GYA  G+  E     D MV 
Sbjct: 313 GLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVG 372

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ PN+ ++N        +  +  A+ + + M  + + P+   Y+ L   LC+ G V  
Sbjct: 373 NGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDD 432

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A    NQ++ E +  +   +  L+  LC  +    A +L   M+ +G+ P+++ + T++ 
Sbjct: 433 AELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMC 492

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
             C  G +  A ++ + M++V  +P+++ YN++I G C     D A  LL     +GL  
Sbjct: 493 NLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           +  TYNTL++GY  +G+I +A+++F EM + GI    V YN +++ L K   + +A+EL 
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELY 612

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             MI  G      TY  ++   SKN   +E +++   +    +  D  T+N +I  LL +
Sbjct: 613 LNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKD 672

Query: 652 KSAED 656
              ED
Sbjct: 673 GRKED 677



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 155/545 (28%), Positives = 258/545 (47%), Gaps = 21/545 (3%)

Query: 119 NLMSANSVSPLEFLEGLLD-SYEIC-----KATPA-------VFDALVRACTQIGATEGA 165
           NL+S N+V    F EG +D +Y +      +  P        V D L +A       + A
Sbjct: 203 NLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKA----QVVDRA 258

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
             V Q++  KG   +I  +   +   + + +     ++ KEM + G   +  T+ L++  
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LCK+ K  EA  L+  M++ GI P+V  + +I++     G L    ++   + +M G+ +
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALS---EMHSFLDLMVGNGI 375

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            PN    N +   F K   +  A +I   M + G+  NV  YATLID   + G  ++A  
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
             ++M+  G+ PN VV+ S ++ L      E A  +  +M+++ I P+   ++ +   LC
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
             G V +A +L + +       D  SYN LI   C       A +LL  M+  GL P+  
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNEC 555

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY TL+ GYC+ G I+ A  V++ M      P +V YN+I++GL K      AK L    
Sbjct: 556 TYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM 615

Query: 526 QRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G   +I TYN ++NG   N  + EA  MF  + +  + V+ + +NI+I  L K G  
Sbjct: 616 ITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRK 675

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           + A  L   +  +G++PD  TY  +     +  S EE   +  +M  SG +P++   N +
Sbjct: 676 EDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFL 735

Query: 645 ISPLL 649
           +  LL
Sbjct: 736 VRRLL 740



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 231/500 (46%), Gaps = 28/500 (5%)

Query: 121 MSANSVSPLEFLEGLLDSY----EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           MSA+ + P  F  GLL  Y      C     +FD+++R                K  V  
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGI-------------KPDVSI 346

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           + + +H +    +    L+E+  F  L   MV  G   N   FN+V  A  K+  + EA+
Sbjct: 347 YGIILHGY----ATKGALSEMHSFLDL---MVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            ++ +M + G+ PNVV +  +I+  C++G ++ A   F +M     + V PN V    ++
Sbjct: 400 DIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM---INEGVAPNIVVFTSLV 456

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            G C + + E A E+ + M+  GI  NV  + T++      G   +A RL D M + G  
Sbjct: 457 YGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTR 516

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+ + YN+ I      G  + A  +L  M+   + P+  TY+ L  G CR+G +  A+ +
Sbjct: 517 PDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSV 576

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++L   +     +YN +++ L K+   + AK+L  +MI  G    I TY  +++G  K
Sbjct: 577 FQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSK 636

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
              ++ A+++++++   + + +++ +N +I  L KD   + A +L       GL+ D  T
Sbjct: 637 NNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTT 696

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y  +       G + E   MFSEM   G A N +  N L+  L   G   +A   +  + 
Sbjct: 697 YRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKID 756

Query: 596 LHGIIPDYVTYTTLVTRFSK 615
                 +  T + L++ FS+
Sbjct: 757 EKNFSLEASTTSMLISLFSR 776



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 205/467 (43%), Gaps = 47/467 (10%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL------EFALKLFRKMGVMSGDSV 285
           +++AL L+   L      +++ FN ++               E  +  F +M       V
Sbjct: 31  VDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIRDCCSKV 90

Query: 286 LPNSVTHNCIINGFCKLGRVEF------------------------------AEEIRYA- 314
            P+  T++ ++  FC++GR+E                               A+ +  A 
Sbjct: 91  APDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAM 150

Query: 315 ------MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK---RGLMPNNVVYNST 365
                 M + G   NV +Y TL+ G+     +EEAL L   M     R   PN V YN+ 
Sbjct: 151 GVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTV 210

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I+  F EG V+ A  +  DM D+ I P+  TY+I+  GLC+   V +A  +  Q++++ +
Sbjct: 211 INGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             +  +Y  LI+            ++L  M   GL PD  TYG L+D  CK G    A +
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           ++++M +   KP++ IY  I++G     +L    S L      G+  +   +N +   + 
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
               I EA  +F++MR  G++ N V Y  LI+ LCK G    A      MI  G+ P+ V
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            +T+LV         E+  EL  +MV  G+ P+   +N I+  L  E
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTE 497



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 163/367 (44%), Gaps = 52/367 (14%)

Query: 330 LIDGYARGGS--SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV------EGALFV 381
           +I   AR GS   ++AL+L DE +      + + +N  +  + +          E  +  
Sbjct: 19  IIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSC 78

Query: 382 LSDMID---KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL----------------- 421
            + MI      + PD FTYSIL    CR G ++  F     +L                 
Sbjct: 79  FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138

Query: 422 ---EEHMVGDAY-----------------SYNILINYLCKSNNLAAAKQLLSSMI---VR 458
              +   VG+A                  SYN L+   C  N    A +LL  M    VR
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR 198

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
              P++++Y T+I+G+   G ++ A  ++ +M      PN+V Y  +I+GLCK   +D A
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + + Q     G+  + +TY  LI+GY   G+  E   M  EM   G+  +   Y +L+++
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G   +AR+L   MI  GI PD   Y  ++  ++   +  E+    D MV +G+SP+
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378

Query: 638 NQTYNAI 644
           +  +N +
Sbjct: 379 HYIFNIV 385



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 137/293 (46%), Gaps = 4/293 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           CT+ G    A  +I  ++  G    I ++N  +     + +     KL   M+S G   N
Sbjct: 495 CTE-GRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
             T+N +++  C++ ++++A S++  ML +GI P VV +N I++   +      A +L+ 
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            M + SG     +  T+N I+NG  K   V+ A ++  ++    +  ++ T+  +I    
Sbjct: 614 NM-ITSGKQW--SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALL 670

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  E+A+ L   +   GL+P+   Y      L  EG +E    + S+M      P+  
Sbjct: 671 KDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSL 730

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
             + L + L   G + +A    +++ E++   +A + ++LI+   +  + A +
Sbjct: 731 MLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKS 783


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 224/430 (52%), Gaps = 6/430 (1%)

Query: 82  TWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDS 138
           TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       +L++
Sbjct: 1   TWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILET 60

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
               ++   VF  L+ A  +      A +  +  +     V        L HL+KL    
Sbjct: 61  KGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFK 120

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             W  YK ++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++
Sbjct: 121 LVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 180

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N   ++GDL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  
Sbjct: 181 NGYIRLGDLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 237

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  N  T+ TLIDG+ + G  + A+ +   M+ + L+P+ + YN+ I+ L  +GD++ A
Sbjct: 238 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQA 297

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             ++ +M  K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ 
Sbjct: 298 HHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISG 357

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LC+      A+++L  M+  GL P+  TY  +I+ +CK G++    ++ + M++    P+
Sbjct: 358 LCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 417

Query: 499 LVIYNSIING 508
           +V YN ++NG
Sbjct: 418 VVTYNVLMNG 427



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 152/286 (53%), Gaps = 1/286 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R G + + F+L + +L
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+ TLIDG+CK G ++
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A  L+      GL  D ITY TLI
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 321 DGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 380

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           P+  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 381 PNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 426



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 162/318 (50%), Gaps = 34/318 (10%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 142 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 201

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 202 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 261

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ ++L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 262 AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLID 321

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G+++ A +  + M +     + V Y ++I+GLC++                    
Sbjct: 322 GCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQE-------------------- 361

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
                         G+  +A  M  EM +VG+  N   Y ++IN  CK G   +  +L+K
Sbjct: 362 --------------GRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLK 407

Query: 593 VMILHGIIPDYVTYTTLV 610
            M   G +P  VTY  L+
Sbjct: 408 EMQRDGHVPSVVTYNVLM 425



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  +  +LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 120 KLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 179

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 180 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 239

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++  M +  +  + + YN LI  LCK G  +QA  
Sbjct: 240 VPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHH 299

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 300 LIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLC 359

Query: 650 GEKSAED 656
            E  + D
Sbjct: 360 QEGRSVD 366



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 130/253 (51%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C++G ++ A  + + + +  +     SYN L+N   +  +L    +L S+
Sbjct: 139 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 198

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 199 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 258

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +      LL D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 259 VDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT 318

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G    A E  K MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 319 LIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 378

Query: 634 VSPDNQTYNAIIS 646
           + P+ +TY  II+
Sbjct: 379 LKPNXRTYTMIIN 391


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 221/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL      FR    M    V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLNEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K + PD FTY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++   KP++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVV 417



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 150/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G   E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  MI++GL PD  TY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWXGSKLLKEMQRDG 411



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A  L   M+ +GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D  TY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKP 414



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 150/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
                + + M    + PD +TYS+L  GLC+   +  A  L +++L++ +V +  ++  L
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+   Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G  P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 126/228 (55%), Gaps = 1/228 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y +NIL++   K   +  A+ +  ++   GL P ++++ TL++GY K G++    ++   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M+    +P++  Y+ +INGLCK++ +D A  L       GL+ + +T+ TLI+G+  NG+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +  A  ++ +M +  ++ + + YN LI  LCK G  +QA++L+  MI+ G+ PD  TYTT
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    K    E   E    M+   +  D+  Y A+IS L  E  + D
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A  +++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K  Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 256/528 (48%), Gaps = 21/528 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           D   ++ ++M+ N V+P                   V+  L+    + G  E    ++  
Sbjct: 324 DKAFVLFDVMAGNGVTP----------------DLIVYSILIDGLFKAGRLEDGQRLLLV 367

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
              KG  + +  +++ +   VK+ ++GR  ++YK M++ G   NV + +++I   C+  +
Sbjct: 368 ALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGR 427

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + EA  L+ ++LK G  P+++ ++ +I   C+ G+L     L+     M      P+++ 
Sbjct: 428 ILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYED---MIKKRCEPDTIV 484

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ +ING CK G V  A    +  +  G+  NV T  TL+D + R      A+++   M 
Sbjct: 485 YSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMG 544

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
              +  + V Y   I      G V+ AL +   M+ K   PD  TY  L  GLC+     
Sbjct: 545 MLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSS 604

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
               + + + +  +  D   YN+LIN   +  +L AA  L   ++ RG  PD+ T+ T+I
Sbjct: 605 AGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMI 664

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
             YC    ++ AVQ++  M   + +PN + +  +I+  C++  +D A  +       G  
Sbjct: 665 CCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPE 724

Query: 531 LDAITYNTLINGYFINGKIAEA-FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
            + +TY+ LI+GYF +  + E+   +++EM    IA N V Y+ILI+ LCK G  ++A  
Sbjct: 725 PNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASC 784

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
             +  +   ++PD + YT L+  + K     E + L+D+M+L+ ++PD
Sbjct: 785 AFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 280/573 (48%), Gaps = 45/573 (7%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSY-EICKATP----AVFDALVRACTQIGATEGAYDVI 169
           LL+G+L+ ++ V      E ++D Y E+C A      +V++ ++      G  E      
Sbjct: 207 LLLGSLIDSHCV------EVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFH 260

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           + L   G  + I   N  L  +   N+IG     +  +V  G   NV TF+ +I A CKE
Sbjct: 261 KALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKE 320

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE--------------------- 268
             L++A  L+  M  +G+ P+++ ++++I+   + G LE                     
Sbjct: 321 GNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGF 380

Query: 269 -FALKLFRKMG----------VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
             A+  + K+G           M  + + PN V+ + +I GFC+ GR+  A  +   ++K
Sbjct: 381 SSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILK 440

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G + ++ TY+ LI G+ + G+  +   L ++M+K+   P+ +VY+  I+ L  +G V  
Sbjct: 441 LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGD 500

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL      +++ + P+ FT + L    CR  C+  A K++  +   ++  D  +Y ILI 
Sbjct: 501 ALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIK 560

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
              +   +  A  L   M+ +   PD+ITY TLIDG CK       + +++ M K    P
Sbjct: 561 GAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAP 620

Query: 498 NLVIYNSIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
           ++ IYN +IN   ++  L+AA  L +   +R    D  T+NT+I  Y    ++ +A  +F
Sbjct: 621 DIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLF 680

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           ++M +  +  N + + ILI+  C+ G    A  +   M+  G  P+ VTY+ L+  + K+
Sbjct: 681 AKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKS 740

Query: 617 CS-PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            S  E  ++L+++M+ + ++P+  +Y+ +I  L
Sbjct: 741 QSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 154/669 (23%), Positives = 283/669 (42%), Gaps = 61/669 (9%)

Query: 44  RQRKWKILEQMAPSLTNSL-----------------VNRVVSEFRKSPKLALEFYTWVGE 86
           + + W ++ Q+  +  N                   V  V+   +  P  A+ F+ W   
Sbjct: 47  KNKNWSLIHQIVKAFHNQQNPKPLNPILLSKLQLYHVPDVIISLQPKPFSAIRFFEWAES 106

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS--ANSVSPLE-FLEGLLDSYEICK 143
                 S  S CA++H+L+  + F  A  +    +    N    L+ F +G  D      
Sbjct: 107 FFISPLSAPSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDAFRDGFCDLDSTNH 166

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           +   V+  L+ +  + G  + + D+   + VKG  VS +     L  L+  + +      
Sbjct: 167 SV--VYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDK 224

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--------------IW- 248
           Y E+ S    +  + +  V+     + ++E  L  +  +++ G              IW 
Sbjct: 225 YGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWM 284

Query: 249 --------------------PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
                               PNVV F+ +I+  C+ G+L+ A  LF    VM+G+ V P+
Sbjct: 285 QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLF---DVMAGNGVTPD 341

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            + ++ +I+G  K GR+E  + +    +  GI  +V  +++ +D Y + G     +++  
Sbjct: 342 LIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYK 401

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M+  G+ PN V  +  I      G +  A  +   ++     P   TYS L  G C++G
Sbjct: 402 RMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSG 461

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            ++  F L+  ++++    D   Y++LIN LCK   +  A +     + RGL P++ T  
Sbjct: 462 NLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLN 521

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQR 527
           TL+D +C+   I GA++VY  M  +  K + V Y  +I G  +   +D A  L  Q  ++
Sbjct: 522 TLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKK 581

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
               D ITY TLI+G     K +    +F  M    +A +   YN+LIN   + G  + A
Sbjct: 582 DFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAA 641

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             L   ++  G  PD  T+ T++  +      ++ ++L   M    + P+  T+  +I  
Sbjct: 642 LGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDA 701

Query: 648 LLGEKSAED 656
              E   +D
Sbjct: 702 FCREGRMDD 710



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 165/333 (49%), Gaps = 14/333 (4%)

Query: 145 TPAVF------DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           +P VF      D+  R    +GA +  Y ++  L +K  +V+   +   +    +   + 
Sbjct: 514 SPNVFTLNTLLDSFCRLKCIVGAMK-VYYLMGMLNIKADTVT---YTILIKGAAQFGRVD 569

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L+ +M+   +  +V T+  +I  LCK  K    L ++  M K+ + P++  +N++I
Sbjct: 570 EALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLI 629

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N   + G LE AL LF  + V  G    P+  T N +I  +C   R++ A ++   M   
Sbjct: 630 NMHSREGHLEAALGLFVHV-VERGPK--PDVFTFNTMICCYCNFKRLDDAVQLFAKMTSE 686

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF-AEGDVEG 377
            +  N  T+  LID + R G  ++A+ +  +M++ G  PN V Y+  IH  F ++  +E 
Sbjct: 687 QLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMES 746

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
            L + ++M++ +I P+  +YSIL  GLC+ G +K+A       L++H++ D  +Y ILI 
Sbjct: 747 GLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIR 806

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             CK   L  A  L  +M++  L PD     TL
Sbjct: 807 GYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 157/322 (48%), Gaps = 11/322 (3%)

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
           +L G+L+     KA    +  L++   Q G  + A  +  ++  K     +  +   +  
Sbjct: 541 YLMGMLN----IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDG 596

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L KL +      ++  M       ++  +N++I    +E  LE AL L+  +++ G  P+
Sbjct: 597 LCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPD 656

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  FN +I   C    L+ A++LF KM   + + + PN++T   +I+ FC+ GR++ A  
Sbjct: 657 VFTFNTMICCYCNFKRLDDAVQLFAKM---TSEQLRPNAITFTILIDAFCREGRMDDAML 713

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSS-EEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           +   M++ G + N+ TY+ LI GY +  S  E  L+L +EM++  + PN V Y+  I  L
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G ++ A       +DKH+ PD   Y+IL +G C+ G + +A  L++ +L   +  D 
Sbjct: 774 CKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDR 833

Query: 430 YSYNILINYLCKSNNLAAAKQL 451
           +    L  Y  K    A AK L
Sbjct: 834 FLERTLEEYQLKK---AGAKHL 852


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 259/510 (50%), Gaps = 7/510 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           C  +  V  + ++A  +    + A ++ Q +  + G +  I ++N+ L+  ++ N+    
Sbjct: 74  CTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREA 133

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
              +    + G   N+ T+N++I   CK+ + E+   L   M ++G+ P+++ +  +IN 
Sbjct: 134 ELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINA 193

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI-RYAMIKAG 319
             + G+L  A++LF +M V     V P+ + +N +I+GF + G    A EI +  + ++ 
Sbjct: 194 LAKSGNLLDAVELFDEMSVRG---VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESS 250

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V TY  +I+G  + G  +E++ + + M K    P+   ++S IH L   G+   A 
Sbjct: 251 VYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAE 310

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +MI+  + PD  TY+ +  GL R G + + F+L N V+ ++   +  SYN+LI  L
Sbjct: 311 KVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWN-VMSKNNCCNIVSYNMLIQGL 369

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
             +  +  A      +  RGL  D  TYG LI+G CK G +  A+++ E  +      + 
Sbjct: 370 LDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDT 429

Query: 500 VIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
             Y+S+++GLCK   L+ A  L+ Q  +    L++  +N+LINGY    K+ EA ++  E
Sbjct: 430 FAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLRE 489

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M++   A   V YN +IN LCK   +  A   +K M+  G+ PD +TY+ L+    +   
Sbjct: 490 MKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK 549

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +  + L    +   + PD Q +N II  L
Sbjct: 550 VDMALNLWHQCINKRLKPDLQMHNIIIHGL 579



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 261/550 (47%), Gaps = 40/550 (7%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L   + ++D +  C      F++++ A  +      A       +  G S ++  +N  +
Sbjct: 98  LNLFQNMVDIFG-CNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILI 156

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               K  +  +   L   M   G   ++ ++  +I AL K   L +A+ L+  M   G+ 
Sbjct: 157 KISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVN 216

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V+C+N++I+   + GD   A ++++++  ++  SV P+  T+N +ING CKLG+++ +
Sbjct: 217 PDVMCYNILIDGFLRKGDFVKANEIWKRL--LTESSVYPSVETYNIMINGLCKLGKLDES 274

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            E+   M K     ++ T++++I G ++ G+   A ++  EM++ GL P+   YN+ +  
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           LF  G +    F L +++ K+ C +  +Y++L +GL  N  V+QA      + E  +  D
Sbjct: 335 LFRTGKLNKC-FELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 393

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           + +Y +LIN LCK+  L  A ++L      G   D   Y +++ G CK G +E AV++  
Sbjct: 394 STTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIH 453

Query: 489 NMKKVEKK-----------------------------------PNLVIYNSIINGLCKDA 513
            MKK  +K                                   P +V YN+IINGLCK  
Sbjct: 454 QMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAE 513

Query: 514 SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
               A   L+     GL  D ITY+ LI+G     K+  A  ++ +  N  +  +   +N
Sbjct: 514 RFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHN 573

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           I+I+ LC       A E+   M     +PD VT+ T++    K     E +++ D ++ +
Sbjct: 574 IIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEA 633

Query: 633 GVSPDNQTYN 642
           G+ PD  +YN
Sbjct: 634 GLQPDIISYN 643



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 255/506 (50%), Gaps = 6/506 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+ A  + G    A ++  ++ V+G +  +  +N  +   ++  +  +  +++K ++
Sbjct: 187 YGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246

Query: 209 SCGYV-ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +   V  +V T+N++I  LCK  KL+E++ ++ RM K+   P++  F+ +I+   + G+ 
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNF 306

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A K+F++M + SG S  P+  T+N +++G  + G++    E+   M K    CN+ +Y
Sbjct: 307 NAAEKVFQEM-IESGLS--PDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSY 362

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G       E+A+     + +RGL  ++  Y   I+ L   G +  AL +L +  +
Sbjct: 363 NMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAEN 422

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +    D F YS +  GLC+ G ++QA +L +Q+ +     +++ +N LIN   ++  L  
Sbjct: 423 EGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEE 482

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M  +   P +++Y T+I+G CK      A    + M +   KP+++ Y+ +I+
Sbjct: 483 AISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLID 542

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC+   +D A +L  Q   +    D   +N +I+G     K+  A  +F++MR V    
Sbjct: 543 GLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVP 602

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + V +N ++  L K G   +A ++   ++  G+ PD ++Y              + IE  
Sbjct: 603 DLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFL 662

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEK 652
            D +  G+ P+  T+N ++  ++ +K
Sbjct: 663 YDALDRGILPNAPTWNVLVRAVVDDK 688



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 229/472 (48%), Gaps = 29/472 (6%)

Query: 93  SLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDAL 152
           S+E+   +++ L    + D+++  M N M  N  SP  F                 F ++
Sbjct: 254 SVETYNIMINGLCKLGKLDESME-MWNRMKKNEKSPDLF----------------TFSSM 296

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV---KLNEIGRFWKLYKEMVS 209
           +   ++ G    A  V Q++   G S  +  +N  LS L    KLN+    W +  +   
Sbjct: 297 IHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC 356

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
           C    N+ ++N++I  L    K+E+A+  +  + + G+  +   + ++IN  C+ G L  
Sbjct: 357 C----NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNK 412

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL++  +      D    ++  ++ +++G CK G +E A E+ + M K     N   + +
Sbjct: 413 ALRILEEAENEGADL---DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNS 469

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI+GY R    EEA+ +  EM  +   P  V YN+ I+ L        A   L +M+++ 
Sbjct: 470 LINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG 529

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  TYS+L  GLCR   V  A  L +Q + + +  D   +NI+I+ LC +  +  A 
Sbjct: 530 LKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVAL 589

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           ++ + M     +PD++T+ T+++G  K G+   A+++++ + +   +P+++ YN    GL
Sbjct: 590 EIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGL 649

Query: 510 CKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           C  A + DA + L  A  R  L +A T+N L+     +  + E +A+ +E R
Sbjct: 650 CSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME-YALNTESR 700



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 66/115 (57%)

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           ++N+++N +  + +  EA   F+  +  G++ N   YNILI   CK   +++ + L+  M
Sbjct: 116 SFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWM 175

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             +G+ PD ++Y TL+   +K+ +  + +EL D+M + GV+PD   YN +I   L
Sbjct: 176 FENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFL 230


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 258/506 (50%), Gaps = 17/506 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI--GRFWKLY 204
           ++F  L R     G   GA   +  +   G    +  WN+ + H   +N +   +   +Y
Sbjct: 59  SLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLI-HQFNVNGLVHDQVSLVY 117

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            +M++CG   +V   N++I++LCK  +L  A+SL    +   I  + V +N +I+  C+ 
Sbjct: 118 SKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNRV---ISVDTVTYNTVISGLCEH 174

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G  + A +   +M  +    +LP++V+ N +I+GFCK+G    A+    A++    + N+
Sbjct: 175 GLADEAYQFLSEMVKIG---ILPDTVSFNTLIDGFCKVGNFARAK----ALVDEISELNL 227

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T+  LI  Y    + EEA R   +MV  G  P+ V ++S I+ L  +G V     +L +
Sbjct: 228 ITHTILISSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLRE 284

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M +  + P+H TY+ L   L +    + A  L++Q++   +  D   Y +L+  L K+ +
Sbjct: 285 MEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGD 344

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A++    ++    +P+++TY  L+DG CK G++  A  +   M +    PN+V Y+S
Sbjct: 345 LREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSS 404

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +ING  K   L+ A SL++  +   ++ +  TY T+I+G F  GK   A  M  EMR +G
Sbjct: 405 MINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIG 464

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  N    + L+N L + G  ++ + L+K M+  G+  D++ YT+L+  F K    E  +
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAAL 524

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLL 649
              ++M    +  D  +YN +IS LL
Sbjct: 525 SWAEEMQEKEMPWDVVSYNVLISGLL 550



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 249/535 (46%), Gaps = 40/535 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  LV +  +      A  +  ++ V+G  V +  +   ++ L K  ++    K +K +
Sbjct: 296 TYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKML 355

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +    V NV T+  ++  LCK   L  A  +  +ML+  ++PNVV ++ +IN   + G L
Sbjct: 356 LEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGML 415

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A+ L RKM      +V+PN  T+  +I+G  K G+ E A E+   M   G++ N    
Sbjct: 416 EEAVSLMRKM---EDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYIL 472

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++   R G  +E   L  +MV +G+  +++ Y S I   F  GD E AL    +M +
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQE 532

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K +  D  +Y++L  GL + G V   +  +  + E+ +  D  ++NI++N   K  +   
Sbjct: 533 KEMPWDVVSYNVLISGLLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDFEG 591

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV------- 500
             +L   M   G+ P ++    ++   C+ G ++ A+ + + M  +E  PNL        
Sbjct: 592 ILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLD 651

Query: 501 ----------------------------IYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
                                       +YN++I  LCK      A  +++  +  G + 
Sbjct: 652 MSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVP 711

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D +T+N L++GYF+   + +A + +S M   GI+ N   YN +I  L   G  ++  + +
Sbjct: 712 DTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWL 771

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             M   G+ PD  TY  L++  +K  + +E + ++ +M+  G+ P   TYN +IS
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLIS 826



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 224/478 (46%), Gaps = 9/478 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +++    + G  E A  +++K++ +    +   +   +  L K  +     ++ KEM
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEM 460

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G  EN    + ++  L +  +++E   L   M+  G+  + + +  +I+   + GD 
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDE 520

Query: 268 EFALKLFRKMGVMSGDSVLP-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           E AL    +M     +  +P + V++N +I+G  K G+V  A+     M + GI+ ++ T
Sbjct: 521 EAALSWAEEMQ----EKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIAT 575

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  +++   + G  E  L+L D+M   G+ P+ ++ N  +  L  +G ++ A+ +L  M+
Sbjct: 576 FNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMM 635

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I P+  TY I      ++      FK H  +L   +      YN LI  LCK     
Sbjct: 636 FMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTR 695

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  ++  M  RG +PD +T+  L+ GY  G ++  A+  Y  M +    PN+  YN+II
Sbjct: 696 KAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTII 755

Query: 507 NGLCKDASL--DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
            GL  DA L  +  K L +   R    D  TYN LI+G    G   E+  ++ EM   G+
Sbjct: 756 RGLS-DAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGL 814

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
                 YN+LI+   K G   QA ELMK M    + P+  TY T+++   K C+  EV
Sbjct: 815 VPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTHPEV 872



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 173/366 (47%), Gaps = 35/366 (9%)

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL-FVL 382
           V  + TL   Y   G    A R    M   G++P+  ++NS IH     G V   +  V 
Sbjct: 58  VSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVY 117

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK-LHNQVLEEHMVGDAYSYNILINYLCK 441
           S MI   + PD F  ++L   LC+ G +  A   L N+V+      D  +YN +I+ LC+
Sbjct: 118 SKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNRVISV----DTVTYNTVISGLCE 173

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA------------------ 483
                 A Q LS M+  G++PD +++ TLIDG+CK GN   A                  
Sbjct: 174 HGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTIL 233

Query: 484 VQVYENMKKVEK----------KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           +  Y N+  +E+           P++V ++SIIN LCKD  +     LL+  + +G+  +
Sbjct: 234 ISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPN 293

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +TY TL++  F       A A++S+M   GI V+ V Y +L+  L K G  ++A +  K
Sbjct: 294 HVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFK 353

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +++    +P+ VTYT LV    K         +   M+   V P+  TY+++I+  + + 
Sbjct: 354 MLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKG 413

Query: 653 SAEDQV 658
             E+ V
Sbjct: 414 MLEEAV 419


>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/534 (27%), Positives = 263/534 (49%), Gaps = 8/534 (1%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           ++++ P L +  +++++   + +   AL F+ WV  +     S  + C I+H+L   R+F
Sbjct: 89  IKELIPHLGHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQF 148

Query: 111 DDALLLMGNL--MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
             A+  +  L  +S +  S  +  + L+   E C   P +F+ L++A  ++     +Y  
Sbjct: 149 PLAMKFLSELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWS 208

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
            +K+   G   ++ A N  L+ L K+    + W+LY+EM   G   N  TFN++ Y LC+
Sbjct: 209 FKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCR 268

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           +  + +      +M + G  P+VV +N +I+   + G LE A  L++   +M    V+P+
Sbjct: 269 DGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYK---IMYRRGVMPD 325

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
            V++  ++ G C+LGRV  A ++ + MI  G+D +V  Y TLI  Y + G  +EA  L  
Sbjct: 326 LVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLH 385

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM+  G+ P++      +     EG +  AL ++ ++    +   H  Y  L   LCR  
Sbjct: 386 EMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCRED 445

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
               A  L  ++LE+    D+  YN LI   C+SNN++ A  L   MI R   P   TY 
Sbjct: 446 RPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYK 505

Query: 469 TLIDGYCK-GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQ 526
           +LI   C+   +++G   + E M + E  P+  I  +++NG CK+ + D A+SLL + ++
Sbjct: 506 SLIHCMCEINRSVDGEGLMVE-MVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAK 564

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
                D+ ++N+L+  Y   G   +   +   M   G   N +    +I+ + K
Sbjct: 565 DFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWK 618



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 183/397 (46%), Gaps = 4/397 (1%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N V F M+I    ++  +  +   F+KM  +     +PN +  NCI+NG  K+       
Sbjct: 185 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLG---FVPNVIACNCILNGLAKMKSDAQCW 241

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           E+   M + G+  N  T+  L     R G   +     ++M + G  P+ V YN+ I   
Sbjct: 242 ELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSY 301

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G +E A ++   M  + + PD  +Y+ L +GLCR G V++A +L +++++  M  D 
Sbjct: 302 VRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDV 361

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
             YN LI   CK   L  A+ LL  MI  G+ PD  T   L++GY + G +  A+ +   
Sbjct: 362 VLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVE 421

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           ++K+       IY  +I  LC++    AAKSLL+         D+  YN LI  +  +  
Sbjct: 422 IQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNN 481

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           ++EA  +  EM N         Y  LI+ +C+         LM  M+   +IPD+     
Sbjct: 482 VSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRA 541

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           LV  + K  + ++   L           D++++N+++
Sbjct: 542 LVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLV 578



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 9/284 (3%)

Query: 374 DVEGALFVLSDMIDKHICPDH-----FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           DV  +  V  +++   +C +H       + +L K   +   + +++    ++++   V +
Sbjct: 164 DVSSSEDVFQNLV---LCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPN 220

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             + N ++N L K  + A   +L   M   G+  +  T+  L    C+ G++       E
Sbjct: 221 VIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLE 280

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M++    P++V YN++I+   +   L+ A  L +   R G++ D ++Y +L+ G    G
Sbjct: 281 KMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLG 340

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ EA  +F  M + G+  + V YN LI   CK G  Q+AR L+  MI  GI PD  T  
Sbjct: 341 RVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCR 400

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            LV  + +       + L  ++   GV+  +  Y  +I  L  E
Sbjct: 401 ILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCRE 444



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 142/380 (37%), Gaps = 69/380 (18%)

Query: 132 LEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           + G L+  E     P V  ++ L+ +  + G  E A+ + + +  +G    + ++ + + 
Sbjct: 275 INGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMR 334

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L +L  +    +L+  M+  G   +V  +N +I A CK+  L+EA SL + M+  GI P
Sbjct: 335 GLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHP 394

Query: 250 NVVCFNMIINEACQVGDLEFALKL---FRKMGVMSG------------------------ 282
           +     +++    + G L  AL L    +K+GV                           
Sbjct: 395 DSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLL 454

Query: 283 -----DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                DS  P+S  +N +I  FC+   V  A  ++  MI         TY +LI      
Sbjct: 455 ERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEI 514

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
             S +   L  EMV+  ++P                             D  IC      
Sbjct: 515 NRSVDGEGLMVEMVESEVIP-----------------------------DHEIC------ 539

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
             L  G C+ G   +A  L     ++    D+ S+N L+       N     +L   M+ 
Sbjct: 540 RALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNETKLMELQDRMLK 599

Query: 458 RGLIPDIITYGTLIDGYCKG 477
            G +P+ +T   +I G  K 
Sbjct: 600 AGFLPNSLTCRYIIHGIWKS 619



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 51/125 (40%)

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + + +  LI  Y     I E++  F +M  +G   N +  N ++N L K     Q  EL 
Sbjct: 185 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 244

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + M   G+  +  T+  L     ++    ++    + M   G  PD  TYN +I   +  
Sbjct: 245 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 304

Query: 652 KSAED 656
              ED
Sbjct: 305 GRLED 309


>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 538

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 231/471 (49%), Gaps = 10/471 (2%)

Query: 29  PSTEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGEN 87
           P  +D+ F  +   +L Q  W  L +++  L +  V  V+ + +K   L+ EF+ W    
Sbjct: 49  PKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSFEFFNWAKTR 108

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS-PLEFLEGLLDSYEICKATP 146
           N  SHSLE+   ++H L   R+F  A  ++ +++    V  P +  + LL SY  C +TP
Sbjct: 109 NPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTP 168

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            VFD+L +    +     A D   ++K  G   ++ + N ++S L+    +    + Y+E
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M  C    N  T N+V+   C+  KL++ + L   M + G     V +N +I   C+ G 
Sbjct: 229 MRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGL 288

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L  ALKL   MG    + + PN VT N +I+GFC+  +++ A ++   M    +  N  T
Sbjct: 289 LSSALKLKNMMG---KNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVT 345

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TLI+GY++ G  E A R  ++MV  G+  + + YN+ I  L  +     A   + ++ 
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELD 405

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            +++ P+  T+S L  G C      + F+L+  ++      +  ++NILI+  CK+ +  
Sbjct: 406 KENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFD 465

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ-VYENMKKVEKK 496
            A Q+L  M+ R +  D  T    +   C G N +G  Q V E ++++E K
Sbjct: 466 GAAQVLREMVRRSIPLDSRT----VHQVCNGLNHQGKDQLVKELLQEMEGK 512



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 162/358 (45%), Gaps = 20/358 (5%)

Query: 291 THNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           TH  +++   K  + + AE I R  ++  G+D   + +  L+  Y          R CD 
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY----------RECDS 166

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
             +        V++S             A      M D    P   + +     L   G 
Sbjct: 167 TPR--------VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR 218

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A + + ++    +  + Y+ N++++  C+S  L    +LL  M   G     ++Y T
Sbjct: 219 VDIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNT 278

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G+C+ G +  A+++   M K   +PN+V +N++I+G C+   L  A  +    + + 
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALN 338

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  + +TYNTLINGY   G    AF  + +M   GI  + + YN LI  LCK    ++A 
Sbjct: 339 LPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAA 398

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +K +    ++P+  T++ L+       + +   EL+  M+ SG  P+ QT+N +IS
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILIS 456



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 149/338 (44%), Gaps = 1/338 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           + +   F  L +   A +    M   G    V +    +      G  + ALR   EM +
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR 231

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
             + PN    N  +      G ++  + +L DM        H +Y+ L  G C  G +  
Sbjct: 232 CKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSS 291

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A KL N + +  +  +  ++N LI+  C++  L  A ++   M    L P+ +TY TLI+
Sbjct: 292 ALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLIN 351

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GY + G+ E A + YE+M     + +++ YN++I GLCK A    A   ++   +  L+ 
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVP 411

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           ++ T++ LI G  +       F ++  M   G   N+  +NILI+  CK   +  A +++
Sbjct: 412 NSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVL 471

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
           + M+   I  D  T   +    +     + V EL  +M
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQEM 509


>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 903

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 162/609 (26%), Positives = 293/609 (48%), Gaps = 10/609 (1%)

Query: 5   FCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN 64
           +  C  +++  L R    G     P   + V R + +     +++ L  ++   ++ L+N
Sbjct: 19  YTRCFSEASRTLRRELRGGNGRIRPELLERVSRLLVLG----RYEALHDLSLDFSDELLN 74

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
            ++   R +P+  +E +    +  +F    ++ C +VH+L   R +      +  L++ N
Sbjct: 75  SILRRLRLNPEACVEIFNLASKQQKFRPDYKAYCKMVHILSRARNYGQTKSYLCELVALN 134

Query: 125 SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
               + + E L+  ++    +P VFD +++   + G  + A  V   +   G   S+ + 
Sbjct: 135 HSGFVVWGE-LVRVFKEFSFSPTVFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSC 193

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N+ LS+LVK  E      +Y +M+S     +V T ++V+ A C+  K+++A++    M  
Sbjct: 194 NSLLSNLVKKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDN 253

Query: 245 S-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           S G+  NVV  N +IN    +GD+E   ++ R   +MS   V  N VT   +I  +CK G
Sbjct: 254 SLGLELNVVTCNSLINGYAMIGDVEGMTRVLR---LMSERGVSRNVVTFTSLIKSYCKKG 310

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            +E AE++   + +  +  +   +  LIDGY R G   +A+R+ D M++ G+  N  + N
Sbjct: 311 LMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICN 370

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I+     G +  A  +L+ M D  + PDH TY+ L  G CR G V +A KL  ++ ++
Sbjct: 371 SLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQK 430

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +V    +YNIL+    +         L   M+ RG+  + I+  TL++   K G+ + A
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEA 490

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           ++++EN+       + +  N +I+GLCK   ++ AK +L          D  TY  L +G
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHG 550

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y+  G + EAFA+   M   GI      YN LI+   K+    +  +L+  +   G+ P 
Sbjct: 551 YYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPT 610

Query: 603 YVTYTTLVT 611
             TY  L+T
Sbjct: 611 VATYGALIT 619



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 215/468 (45%), Gaps = 28/468 (5%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           H +N  +    +   +    KL   M     V  V T+N+++    +     + LSL+  
Sbjct: 402 HTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           MLK G+  N +  + ++    ++GD + A+KL+  +       +L +++T N +I+G CK
Sbjct: 462 MLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENV---LARGLLTDTITLNVMISGLCK 518

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           + +V  A+EI   +       +V+TY  L  GY   G+ +EA  + D M K+G+ P   +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEM 578

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I   F    +     ++ ++  + + P   TY  L  G C  G + +A+    +++
Sbjct: 579 YNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN-I 480
           E+ +  +    + + N L + +    A  LL           I+ +  L+ GY      +
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKFDEACLLLQK---------IVDFDLLLPGYQSLKEFL 689

Query: 481 EGAVQVYENMKKVEKK-----------PNLVIYNSIINGLCKDASLDAAKSL---LQASQ 526
           E +       +K+ +            PN ++YN  I GLCK   L  A+ L   L +S 
Sbjct: 690 EPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSD 749

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R  + D  TY  LI+G  I+G I +AF +  EM   GI  N V YN LI  LCK G   +
Sbjct: 750 RF-IPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           A+ L++ +   G  P+ +TY TL+    K+    E + L + M+  G+
Sbjct: 809 AQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGL 856



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 233/542 (42%), Gaps = 43/542 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F +L+++  + G  E A  V + +  K      H     +    +   I    +++  M
Sbjct: 298 TFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYM 357

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   N    N +I   CK  +L EA  +  RM    + P+   +N +++  C+ G +
Sbjct: 358 IEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHV 417

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + ALKL    G M    V+P  +T+N ++ G+ ++G       +   M+K G+  N  + 
Sbjct: 418 DEALKL---CGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISC 474

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +TL++   + G  +EA++L + ++ RGL+ + +  N  I  L     V  A  +L ++  
Sbjct: 475 STLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  TY  L+ G    G +K+AF + + + ++ +      YN LI+   K  +L  
Sbjct: 535 FRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNK 594

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              L+  +  RGL P + TYG LI G+C  G I+ A      M +     N+ I + I N
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIAN 654

Query: 508 GLCKDASLDAAKSLLQA---------------------------SQRIG----------- 529
            L +    D A  LLQ                            +Q+I            
Sbjct: 655 SLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKL 714

Query: 530 -LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV-NKVGYNILINFLCKFGCYQQA 587
            + + I YN  I G    GK+ +A  +FS++ +    + ++  Y ILI+     G   +A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKA 774

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
             L   M L GIIP+ VTY  L+    K  + +    L   +   G +P+  TYN +I  
Sbjct: 775 FNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDG 834

Query: 648 LL 649
           L+
Sbjct: 835 LI 836



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 211/483 (43%), Gaps = 91/483 (18%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++ L++  ++IGA      + + +  +G + +  + +  L  L KL +     KL+
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLW 494

Query: 205 KEMVSCGYVENVNTFNLVIYALCK-----------------ECK---------------- 231
           + +++ G + +  T N++I  LCK                  CK                
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNV 554

Query: 232 --LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
             L+EA ++   M K GI+P +  +N +I+ A +   L     L  ++       + P  
Sbjct: 555 GNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIEL---RARGLTPTV 611

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T+  +I G+C +G ++ A    + MI+ GI  NV   + + +   R    +EA  L  +
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQK 671

Query: 350 MV--------------------------------------KRGLMPNNVVYNSTIHWLFA 371
           +V                                      K+ L+PNN+VYN  I  L  
Sbjct: 672 IVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCK 731

Query: 372 EGDVEGALFVLSDMI--DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
            G +  A  + SD++  D+ I PD +TY+IL  G   +G + +AF L +++  + ++ + 
Sbjct: 732 AGKLTDAQKLFSDLLSSDRFI-PDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNI 790

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YN LI  LCK  N+  A++LL  +  +G  P+ ITY TLIDG  K G++  A+++ E 
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEK 850

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKI 549
           M          I   ++ G  K   +D  K +L    ++G+      N+  N ++ +  +
Sbjct: 851 M----------IEKGLVRGSYKQGDVDKPKEVLDPGVKLGITGVTEMNS--NEHYDDRIV 898

Query: 550 AEA 552
           +EA
Sbjct: 899 SEA 901



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 163/352 (46%), Gaps = 37/352 (10%)

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           YA  G  + AL + D M K G +P+ +  NS +  L  +G+   AL V   MI   + PD
Sbjct: 165 YAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQMISFEVSPD 224

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQV-----LEEH------------MVGD-------- 428
            FT SI+    CR G V +A     ++     LE +            M+GD        
Sbjct: 225 VFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVL 284

Query: 429 -----------AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
                        ++  LI   CK   +  A+Q+   +  + L+PD   +G LIDGYC+ 
Sbjct: 285 RLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRN 344

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
           G I  AV+V++ M ++  + N  I NS+ING CK   L  A+ +L       L  D  TY
Sbjct: 345 GRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTY 404

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTL++GY   G + EA  +   M    +    + YNIL+    + G +     L K+M+ 
Sbjct: 405 NTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            G+  + ++ +TL+    K    +E ++L ++++  G+  D  T N +IS L
Sbjct: 465 RGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGL 516


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS + K         L+  M  CG   ++ ++N+VI  LC+  +   ALS+ 
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M+K G  P+VV  + +IN  CQ   +  A+ L  KM  M      P+ V +N II+G 
Sbjct: 69  GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM---GFRPDVVIYNTIIDGS 125

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK+G V  A E+   M + G+  +  TY +L+ G    G   +A RL  +MV R ++PN 
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + + + I     EG    A+ +  +M  + + PD FTY+ L  GLC +G V +A ++ + 
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +  + D  +YN LIN  CKS  +    +L   M  RGL+ D ITY T+I GY + G 
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
            + A +++  M   + +PN+  Y+ ++ GLC +  ++ A  L +  Q+  + LD  TYN 
Sbjct: 306 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 362

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I+G    G + +A+ +F  +   G+  + V Y  +I+  C+   + ++  L + M   G
Sbjct: 363 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 422

Query: 599 IIP 601
           ++P
Sbjct: 423 LLP 425



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 223/430 (51%), Gaps = 5/430 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+    + ++  F+ V+  + K    +  +SL++ M   GI  ++  +N++IN  C+   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              AL +  KM     +   P+ VT + +INGFC+  RV  A ++   M + G   +V  
Sbjct: 61  FVIALSVVGKMMKFGYE---PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y T+IDG  + G   +A+ L D M + G+  + V YNS +  L   G    A  ++ DM+
Sbjct: 118 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 177

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + I P+  T++ +     + G   +A KL+ ++    +  D ++YN LIN LC    + 
Sbjct: 178 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 237

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AKQ+L  M+ +G +PD++TY TLI+G+CK   ++   +++  M +     + + YN+II
Sbjct: 238 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 297

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            G  +    DAA+ +   S+     +  TY+ L+ G  +N ++ +A  +F  M+   I +
Sbjct: 298 QGYFQAGRPDAAQEIF--SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL 355

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YNI+I+ +CK G  + A +L + +   G+ PD V+YTT+++ F +    ++   L+
Sbjct: 356 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 415

Query: 627 DDMVLSGVSP 636
             M   G+ P
Sbjct: 416 RKMQEDGLLP 425



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 230/427 (53%), Gaps = 13/427 (3%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           +  P++ D   +  ++I  ++  YD++      ++V G    ++++N  ++ L + +   
Sbjct: 5   RPLPSIVD-FSKVLSKIAKSKN-YDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 62

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               +  +M+  GY  +V T + +I   C+  ++ +A+ L  +M + G  P+VV +N II
Sbjct: 63  IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 122

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           + +C++G +  A++LF +   M  D V  ++VT+N ++ G C  GR   A  +   M+  
Sbjct: 123 DGSCKIGLVNDAVELFDR---MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            I  NV T+  +ID + + G   EA++L +EM +R + P+   YNS I+ L   G V+ A
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             +L  M+ K   PD  TY+ L  G C++  V +  KL  ++ +  +VGD  +YN +I  
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
             ++    AA+++ S M  R   P+I TY  L+ G C    +E A+ ++ENM+K E + +
Sbjct: 300 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
           +  YN +I+G+CK  +++ A  L ++    GL  D ++Y T+I+G+    +  ++  ++ 
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 416

Query: 558 EMRNVGI 564
           +M+  G+
Sbjct: 417 KMQEDGL 423



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 201/406 (49%), Gaps = 7/406 (1%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++S   P++V F+ ++++  +  + +  + LF  M V     +  +  ++N +IN  C+
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG---IGHDLYSYNIVINCLCR 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
             R   A  +   M+K G + +V T ++LI+G+ +G    +A+ L  +M + G  P+ V+
Sbjct: 58  CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I      G V  A+ +   M    +  D  TY+ L  GLC +G    A +L   ++
Sbjct: 118 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +V +  ++  +I+   K    + A +L   M  R + PD+ TY +LI+G C  G ++
Sbjct: 178 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 237

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A Q+ + M      P++V YN++ING CK   +D    L +   + GL+ D ITYNT+I
Sbjct: 238 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 297

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            GYF  G+   A  +FS M +     N   Y+IL+  LC     ++A  L + M    I 
Sbjct: 298 QGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 354

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            D  TY  ++    K  + E+  +L   +   G+ PD  +Y  +IS
Sbjct: 355 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 400



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 23/401 (5%)

Query: 92  HSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA 151
           H L S   +++ L    RF  AL ++G +M       +  +  L++ +  C+    VFDA
Sbjct: 43  HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF--CQGN-RVFDA 99

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +              D++ K++  G    +  +N  +    K+  +    +L+  M   G
Sbjct: 100 I--------------DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 145

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+N ++  LC   +  +A  L   M+   I PNV+ F  +I+   + G    A+
Sbjct: 146 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 205

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           KL+ +   M+   V P+  T+N +ING C  GRV+ A+++   M+  G   +V TY TLI
Sbjct: 206 KLYEE---MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 262

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           +G+ +    +E  +L  EM +RGL+ + + YN+ I   F  G  + A  + S M  +   
Sbjct: 263 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--- 319

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TYSIL  GLC N  V++A  L   + +  +  D  +YNI+I+ +CK  N+  A  L
Sbjct: 320 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 379

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             S+  +GL PD+++Y T+I G+C+    + +  +Y  M++
Sbjct: 380 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 114/219 (52%), Gaps = 1/219 (0%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            ++ +++ + KS N      L   M V G+  D+ +Y  +I+  C+      A+ V   M
Sbjct: 12  DFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKM 71

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
            K   +P++V  +S+ING C+   +  A  L+   + +G   D + YNT+I+G    G +
Sbjct: 72  MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLV 131

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
            +A  +F  M   G+  + V YN L+  LC  G +  A  LM+ M++  I+P+ +T+T +
Sbjct: 132 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 191

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  F K     E ++L+++M    V PD  TYN++I+ L
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 230



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 6/284 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +A    +++LV      G    A  +++ + ++    ++  +   +   VK  +     K
Sbjct: 147 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 206

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LY+EM       +V T+N +I  LC   +++EA  +   M+  G  P+VV +N +IN  C
Sbjct: 207 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 266

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++   KLFR+   M+   ++ +++T+N II G+ + GR + A+EI   M       
Sbjct: 267 KSKRVDEGTKLFRE---MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--- 320

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+RTY+ L+ G       E+AL L + M K  +  +   YN  IH +   G+VE A  + 
Sbjct: 321 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 380

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             +  K + PD  +Y+ +  G CR     ++  L+ ++ E+ ++
Sbjct: 381 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 1/198 (0%)

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           MI    +P I+ +  ++    K  N +  + ++ +M+      +L  YN +IN LC+ + 
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
              A S++    + G   D +T ++LING+    ++ +A  + S+M  +G   + V YN 
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I+  CK G    A EL   M   G+  D VTY +LV     +    +   L  DMV+  
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 634 VSPDNQTYNAIISPLLGE 651
           + P+  T+ A+I   + E
Sbjct: 181 IVPNVITFTAVIDVFVKE 198


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 213/408 (52%), Gaps = 12/408 (2%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +G  V + AW++ ++ L  + E    +  Y +++  G       FN+++  + +  KL  
Sbjct: 206 RGVRVPLPAWSDLMNRLPSVPEA---YAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLAS 262

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A +++  ML+ G+ P VV FN +++  C+  DL  A  L    G+M+   V P+  T+  
Sbjct: 263 ARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANAL---RGLMAKAGVAPDVYTYGA 319

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            + G CK GR++ A E+   M + G++ N   + TLID + + G+    L L  EM  RG
Sbjct: 320 FMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRG 379

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           +  + V YN+  + L    D++ A  ++ +M +  + PD  TY+ L  G C+ G +  A 
Sbjct: 380 IKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAM 439

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           ++  ++ +E +  D  +Y  LI+ L KS     ++++L  M+  GL PD  TY  +ID +
Sbjct: 440 EMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAF 499

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           CK  +++   ++ + M+   +KP +V YN ++NG C    +  A  LL A   IG+  D 
Sbjct: 500 CKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDD 559

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG-YNILINFLCK 580
           ITYN L++G+  +GK+ +A     E+++    V+  G Y  LIN   K
Sbjct: 560 ITYNILLDGHCKHGKVRDA----EELKSAKGMVSDFGLYTSLINEFVK 603



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 204/425 (48%), Gaps = 42/425 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + EA + Y ++L +G+ P    FNM++ +  + G L  A  +F +M +  G  V P  VT
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEM-LRRG--VPPTVVT 281

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +++G CK   +  A  +R  M KAG+  +V TY   + G  + G  ++A+ + +EM 
Sbjct: 282 FNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMR 341

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +RG+ PN VV+                    + +ID H               C+ G V 
Sbjct: 342 ERGVNPNTVVF--------------------TTLIDAH---------------CKEGNVA 366

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
              +LH ++    +  D  +YN L N LC+  +L AA  ++  M   GL PD +TY TLI
Sbjct: 367 AGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLI 426

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGL 530
           DG+CK G ++ A+++ + M       + V Y ++I+GL K   S+D+ + L +  +    
Sbjct: 427 DGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLE 486

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TY  +I+ +  N  +   F +  EM+N G     V YN+++N  C  G  + A  L
Sbjct: 487 PDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADML 546

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M+  G+ PD +TY  L+    K+    +  EL       G+  D   Y ++I+  + 
Sbjct: 547 LNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVK 603

Query: 651 EKSAE 655
           +KS +
Sbjct: 604 KKSTK 608



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 167/331 (50%), Gaps = 4/331 (1%)

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           + G+   +  ++ L++   R  S  EA     +++  G+ P    +N  +  +   G + 
Sbjct: 205 RRGVRVPLPAWSDLMN---RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLA 261

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +  +M+ + + P   T++ L  G+C+   +  A  L   + +  +  D Y+Y   +
Sbjct: 262 SARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFM 321

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             LCK+  +  A ++   M  RG+ P+ + + TLID +CK GN+   ++++  M     K
Sbjct: 322 QGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIK 381

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAM 555
            +LV YN++ NGLC+   L AA  +++  +  GL  D +TY TLI+G+   G++  A  M
Sbjct: 382 TDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEM 441

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             EM + G+A+++V Y  LI+ L K G    +  ++  M+  G+ PD  TYT ++  F K
Sbjct: 442 KQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCK 501

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           N   +   +L  +M   G  P   TYN +++
Sbjct: 502 NSDVKTGFKLLKEMQNKGRKPGVVTYNVVMN 532


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/541 (30%), Positives = 257/541 (47%), Gaps = 20/541 (3%)

Query: 72  KSPKL-ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL- 129
           KSP L AL  +T       F H+ +S   I+HLL++   F  +  L+  L+S    S   
Sbjct: 16  KSPPLKALSLFTSSALQG-FQHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSF 74

Query: 130 -------EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
                  E  +  LDS+        + +A++ A  +    E A     ++  +G     +
Sbjct: 75  TPSSLFHELTQPHLDSF---PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSN 131

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYR 241
            +NN L  L+K N   + W+++ E  + G V+ +V +F ++I   C+   L++   +  +
Sbjct: 132 TFNNLLILLIKSNFFEKAWRVFNE--TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQ 189

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M + G+ PNVV +  +I+  C+ GD+E   +LF KMG +    V+ N  T+  +INGF K
Sbjct: 190 MEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL---DVVANQYTYTVLINGFFK 246

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G  +   E+   M   GI  NV TY ++I      G    A  L DEM +RG+  N V 
Sbjct: 247 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 306

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I  L  E  V  A  ++  M    + P+  +Y+ L  G C  G + +A  L NQ+ 
Sbjct: 307 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 366

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                    +YNILI    ++ N A    ++  M  RGL P  +TY  L+D   +  NIE
Sbjct: 367 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIE 426

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A Q+Y +M+K     ++ IY  +I+GLC    +  A  L ++   + L  + + YNT+I
Sbjct: 427 KAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMI 486

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            GY   G    A  +  EM   G+  N   YN  I  LCK   + +A  L+K MI  G+ 
Sbjct: 487 YGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLK 546

Query: 601 P 601
           P
Sbjct: 547 P 547



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 204/399 (51%), Gaps = 4/399 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  +++ C ++G  +  ++V+ +++  G S ++  +   +    K  +I R  +L+ +M 
Sbjct: 167 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 226

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
               V N  T+ ++I    K    ++ + LY +M  +GI PNV  +N +I   C  G L 
Sbjct: 227 ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN 286

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +LF +M       V  N VT+N +I G C+  RV  AE +   M + G+  N+ +Y 
Sbjct: 287 NAFELFDEM---RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 343

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLIDGY   G+ ++A  L ++M   G  P+   YN  I       +  G   ++ +M  +
Sbjct: 344 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 403

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P   TY+IL   L R+  +++AF++++ + +  +V D Y Y +LI+ LC   ++  A
Sbjct: 404 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 463

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L  S+    L P+ + Y T+I GYCK G+   A+++ + M +    PN+  YNS I  
Sbjct: 464 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQI 523

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFIN 546
           LCKD     A+ LL+    +GL  +I+ +N +    F N
Sbjct: 524 LCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 3/321 (0%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    +  L+    ++G  +   ++ +K+K+ G   +++ +N+ +       ++   ++L
Sbjct: 232 ANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFEL 291

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EM   G   NV T+N +I  LC+E ++ EA  L  RM + G+ PN++ +N +I+  C 
Sbjct: 292 FDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCS 351

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G+L+ A  LF +M   SG S  P+  T+N +I GF +        ++   M   G+  +
Sbjct: 352 IGNLDKASSLFNQMKS-SGQS--PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS 408

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY  L+D   R  + E+A ++   M K GL+ +  +Y   IH L   GD++ A  +  
Sbjct: 409 KVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFK 468

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            + + H+ P+   Y+ +  G C+ G   +A +L  ++ E  MV +  SYN  I  LCK  
Sbjct: 469 SLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDE 528

Query: 444 NLAAAKQLLSSMIVRGLIPDI 464
               A+ LL  MI  GL P I
Sbjct: 529 KWTEAEVLLKDMIELGLKPSI 549



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 199/446 (44%), Gaps = 41/446 (9%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +V+    IIN   +    E AL  F +M    G  ++P S T N ++    K    E A 
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQM---IGRGLVPGSNTFNNLLILLIKSNFFEKAW 150

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            + +   K  +  +V ++  +I G    G  ++   +  +M + GL PN VVY + I   
Sbjct: 151 RV-FNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 209

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              GD+E    +   M +  +  + +TY++L  G  + G  K   +L+ ++    +V + 
Sbjct: 210 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNV 269

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y+YN +I   C    L  A +L   M  RG+  +++TY TLI G C+   +  A ++   
Sbjct: 270 YTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCR 329

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-----------------------QASQ 526
           MK+    PNL+ YN++I+G C   +LD A SL                        +A  
Sbjct: 330 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 389

Query: 527 RIGLLD-------------AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
             G+ D              +TY  L++    +  I +AF ++S M   G+  +   Y +
Sbjct: 390 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 449

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ LC  G  ++A +L K +    + P+ V Y T++  + K  S    + L  +M  +G
Sbjct: 450 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 509

Query: 634 VSPDNQTYNAIISPLL-GEKSAEDQV 658
           + P+  +YN+ I  L   EK  E +V
Sbjct: 510 MVPNVASYNSTIQILCKDEKWTEAEV 535


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 286/647 (44%), Gaps = 64/647 (9%)

Query: 11  KSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKI------LEQMAPSLTNSLVN 64
           ++NS  +  +H+  Q  NP+    +   IC NL+Q    +      +  + P L    ++
Sbjct: 48  QTNSISNSLYHLLPQTQNPNN---IVNLICSNLKQHNSNLALLHTEVNALLPHLGAQEIS 104

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS-- 122
           RV+   +     AL F+ WV  +     S ++ C +VH L   R F  A+  +  L+   
Sbjct: 105 RVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELV 164

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
            + +   +  + L+   E C   P VFD LV+A  ++G         +++   G   ++ 
Sbjct: 165 KDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVI 224

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
             N  L+ L+KLN   R W++Y+EM   G   N+ TFN++ + LCK+    +      +M
Sbjct: 225 TSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKM 284

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            + G  P++V +N +IN  C+ G L+ A  L++   +M    V+P+ V++  ++NG CK 
Sbjct: 285 EEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYK---IMYRRGVVPDLVSYTALMNGLCKE 341

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GRV  A ++ + M+  G+  ++ TY TLI GY + G  +E+  L  +M+  G        
Sbjct: 342 GRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG-------- 393

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
                                      I PD FT  +L +G  + G    A  L   V+E
Sbjct: 394 ---------------------------ISPDSFTCWVLVEGYGKEGKFLSALNL---VVE 423

Query: 423 EHMVG-----DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
               G     D YSY  LI  LC+ N   AAK LL  M   G  P++  Y  LI  +C+ 
Sbjct: 424 LQRFGVSISQDIYSY--LIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQC 481

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
             I  A+ +   M   E KPNL  Y ++I  L + +     +SL+      G+L D    
Sbjct: 482 DCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEIC 541

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             L  GY     I +A ++ S         +   +N LI      G   ++ E+  +M+ 
Sbjct: 542 RALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLK 601

Query: 597 HGIIPDYVT---YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G++P+ +T   +  L +R   +      + + D M  S +  DN++
Sbjct: 602 MGLLPNPLTCNPFAILTSRLRVDVKAAN-MAIFDGMNASSLWGDNES 647



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 167/341 (48%), Gaps = 3/341 (0%)

Query: 308 AEEIRYAMIKAGIDCNVR--TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           +E++   +I    DCN     +  L+  Y R G   E LR    M++ G +P  +  N  
Sbjct: 170 SEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYL 229

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++ L      +    V  +M    I P+ +T++ILT  LC++G   +  K   ++ EE  
Sbjct: 230 LNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGF 289

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +YN LIN  C+   L  A  L   M  RG++PD+++Y  L++G CK G +  A Q
Sbjct: 290 DPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQ 349

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           ++  M      P++V YN++I+G CK+  +  ++SLL      G+  D+ T   L+ GY 
Sbjct: 350 LFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYG 409

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             GK   A  +  E++  G+++++  Y+ LI  LC+      A+ L++ M   G  P+  
Sbjct: 410 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELE 469

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            Y  L+  F +     E + L  +MV   + P+  TY A+I
Sbjct: 470 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVI 510



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 1/260 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D   + +L K   R G V++  +   ++L    V    + N L+N L K N      ++ 
Sbjct: 187 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M   G+ P++ T+  L    CK G+     +  E M++    P++V YN++IN  C+ 
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD A  L +   R G++ D ++Y  L+NG    G++ EA  +F  M + G++ + V Y
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N LI+  CK G  Q++R L+  MI +GI PD  T   LV  + K       + L  ++  
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQR 426

Query: 632 SGVSPDNQTYNAIISPLLGE 651
            GVS     Y+ +I  L  E
Sbjct: 427 FGVSISQDIYSYLIVALCRE 446


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 286/617 (46%), Gaps = 44/617 (7%)

Query: 64  NRVVSEFRKSPK--LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLM 121
           + V+++ +  P   LAL F+  +  +N F H+  +   ++  L  + R  D +  +  LM
Sbjct: 41  SEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRL-GYERDIDGIQYLLQLM 99

Query: 122 SANSVSPLEFL---------------EGLLDSYEI----CKATPAVFDALVRACTQIGAT 162
               +S  E L               + L   Y I    CK +  +++ ++ A       
Sbjct: 100 KLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKF 159

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           +    +   +K  G  ++++ +N  L  L K + +    KL  EM   G + +  ++  V
Sbjct: 160 QMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTV 219

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           + ++C+  K+EEA  L  R     I   V  +N +IN  C+   +E   +LF +M V   
Sbjct: 220 VSSMCRLGKVEEARELSMR-----IKSFVPVYNALINGFCREHKMEEVFELFNEMAV--- 271

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
           + + P+ +T++ +IN   ++G VE A  +   M   G   NV T+ +L+ GY  GG   E
Sbjct: 272 EGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCE 331

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           AL L + M++ G  PN V YN+ IH L + G +  A+ V   M    + P+  TYS L  
Sbjct: 332 ALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLID 391

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G  + G +  A ++ N+++    + +   Y  +++ LC+++    A  L+ +M      P
Sbjct: 392 GFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPP 451

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + IT+ T I G C  G  E A++V   M++    PN+  YN +++GL        AK   
Sbjct: 452 NTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFN------AKRTR 505

Query: 523 QASQRIGLLDA-------ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
           +A Q +G ++        +TYNT+++G+   G    A  +  ++   G   + + YN +I
Sbjct: 506 EALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVI 565

Query: 576 NFLCKFGCYQQARELMKVMILHGI-IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
              CK G  + A +L+  +   G   PD  TYT+L+         +E +   D M+  G+
Sbjct: 566 YAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGI 625

Query: 635 SPDNQTYNAIISPLLGE 651
            P+  T+NA++  L  +
Sbjct: 626 CPNRATWNALVRGLFSK 642



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 212/442 (47%), Gaps = 9/442 (2%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+  +I  L  E  ++    L   M   GI  N   F ++IN   + G  E ALK F ++
Sbjct: 75  TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRI 134

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           G        P+   +N +++      + +    I   M + GI+ NV TY  L+    + 
Sbjct: 135 GEFGCK---PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKN 191

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              + A +L  EM  +G +P+ V Y + +  +   G VE A  +   M  K   P    Y
Sbjct: 192 DRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VY 246

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G CR   +++ F+L N++  E +  D  +Y+ +IN L +  N+  A  +L+ M +
Sbjct: 247 NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFL 306

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RG  P++ T+ +L+ GY  GG +  A+ ++  M +   +PN V YN++I+GLC    +  
Sbjct: 307 RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A S+ Q  +R G+  +  TY+TLI+G+   G +  A  ++++M   G   N V Y  +++
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVD 426

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LC+   +  A  L++ M      P+ +T+ T +     +   E  +++ + M   G +P
Sbjct: 427 VLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAP 486

Query: 637 DNQTYNAIISPLLGEKSAEDQV 658
           +  TYN ++  L   K   + +
Sbjct: 487 NVTTYNEVLDGLFNAKRTREAL 508



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 4/205 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N F+  L    +     K+  +M   G   NV T+N V+  L    +  EAL +   +
Sbjct: 455 TFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            +  I  N+V +N I++  C  G  + AL++  K+ V       P+S+T+N +I  +CK 
Sbjct: 515 EEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLV---GGTKPDSITYNTVIYAYCKQ 571

Query: 303 GRVEFAEEIRYAMIKAGID-CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           G V+ A ++   + K G    +V TY +L+ G       +EA+   D+M+  G+ PN   
Sbjct: 572 GEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRAT 631

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMI 386
           +N+ +  LF++    G + ++ +++
Sbjct: 632 WNALVRGLFSKLGHLGPIHIVDNIL 656


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 244/543 (44%), Gaps = 43/543 (7%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-LY 204
           P  +  L+    ++G  E  +     +   G  V+    N  L  L     +      L 
Sbjct: 94  PCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILV 153

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS---GIWPNVVCFNMIINEA 261
           K M   G   +V ++N ++   C E + EEAL L + M  S      PNVV + ++IN  
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGF 213

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G ++ A  LF +   M    + PN VT+  +I+G CK   V+ AE +   MI  G+ 
Sbjct: 214 FTEGQVDKAYNLFLE---MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY  LI GY   G  +E +R+ +EM   GL P+   Y S +++L   G    A F+
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI K I P+   Y IL  G    G + +   L N ++E  +  D + +NI+     K
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  + + M  +GL PD++ YG LID  CK G ++ AV  +  M      PN+ +
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 502 YNSIINGLCKDASLDAAK-----------------------------SLLQASQRIGLLD 532
           +NS++ GLC     + AK                              +++A + I L++
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510

Query: 533 -------AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
                   I+Y TLI G+ + G+I EA      M +VG+  ++  YN L++  C+ G   
Sbjct: 511 RVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  + + M+ +GI P  VTY+T++          E  EL+ +M+ SG   +   YN I+
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630

Query: 646 SPL 648
           + L
Sbjct: 631 NGL 633



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 144/585 (24%), Positives = 263/585 (44%), Gaps = 65/585 (11%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGAT----------------EGAYDVIQKLK 173
           + L+GL D+  +C+A     D LV+   ++G T                + A + ++ L 
Sbjct: 134 QLLKGLCDAKRLCEA----MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLH 189

Query: 174 VKGHSVSIHAWNNFLSHLVKLN------EIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +   S       N +S+ + +N      ++ + + L+ EM+  G   NV T+  VI  LC
Sbjct: 190 MMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K   ++ A  ++ +M+  G+ P+   +N +I+    +G  +  +++  +M   S   + P
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM---SAHGLKP 306

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T+  ++N  C  GR   A  +  +MI+ GI  NV  Y  LI GYA  G+  E   L 
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           + MV+ GL P++ ++N        +  ++ A+ + + M  + + PD   Y  L   LC+ 
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI--- 464
           G V  A    NQ++ E +  + + +N L+  LC  +    AK+    M+ +G+ PD+   
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 465 --------------------------------ITYGTLIDGYCKGGNIEGAVQVYENMKK 492
                                           I+Y TLI G+C  G I+ A +  + M  
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAE 551
           V  KP+   YN++++G C+   +D A  + +   R G+    +TY+T+++G F   + +E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  ++  M   G   N   YNI++N L K  C  +A +L + +       +  T+  ++ 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              K+   E+ + L   +   G+ PD  TY  I   L+ E   E+
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 203/464 (43%), Gaps = 47/464 (10%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG-------DLEFALKLFRKMGVMSGDS 284
           L++AL L+  +L      +V+ FN ++    +V        + E  + LF +M       
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN--------------------- 323
           V P+  T++ +I  FC++GR+E        ++K+G   N                     
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 324 ---------------VRTYATLIDGYARGGSSEEALRLCDEMVK---RGLMPNNVVYNST 365
                          V +Y TL+ G+     +EEAL L   M     R   PN V Y   
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I+  F EG V+ A  +  +M+D+ I P+  TY+ +  GLC+   V +A  +  Q++++ +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +YN LI+            ++L  M   GL PD  TYG+L++  C  G    A  
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           ++++M +   KPN+ IY  +I+G     +L     LL      GL  D   +N +   Y 
Sbjct: 330 LFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYA 389

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
               I EA  +F++M+  G++ + V Y  LI+ LCK G    A      M+  G+ P+  
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            + +LV         E+  E + +M+  G+ PD   +N I+  L
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNL 493



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 215/490 (43%), Gaps = 23/490 (4%)

Query: 121 MSANSVSPLEFLEGLLDSY----EICKATPAVFDALVRACTQIG-----------ATEGA 165
           MSA+ + P  +  G L +Y      C+    +FD+++R   +             AT+GA
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 166 ----YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
               +D++  +   G S   H +N   +   K   I     ++ +M   G   +V  +  
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I ALCK  ++++A+  + +M+  G+ PN+  FN ++   C V   E A + + +M    
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEM---L 475

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              + P+ V  N I+   C  G+V  A+ +   M + G    V +Y TLI G+   G  +
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRID 535

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA +  D M+  GL P+   YN+ +H     G ++ A  V  +M+   I P   TYS + 
Sbjct: 536 EAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GL       +A +L+  ++      + + YNI++N L K+N +  A +L  S+  +   
Sbjct: 596 HGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQ 655

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
            +I T+  +I    K G  E A+ ++  +      P++  Y  I   L ++  L+    L
Sbjct: 656 LEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDL 715

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
             A ++ G   ++   N L+      G I  A A   ++     ++      +LI+ L +
Sbjct: 716 FSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSR 775

Query: 581 FGCYQQAREL 590
              +  A  L
Sbjct: 776 DEYHHHATSL 785



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 164/364 (45%), Gaps = 21/364 (5%)

Query: 307 FAEEIRYAMIKAGID-CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           F   IR   IK   D C   TY+ LI  + R G  E        ++K G   NN+V N  
Sbjct: 79  FNRMIRECTIKVTPDPC---TYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQL 135

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
           +  L     +  A+ +L   + +  C PD  +Y+ L KG C     ++A +L       H
Sbjct: 136 LKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL------H 189

Query: 425 MVGDAY---------SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           M+ D+          SY I+IN       +  A  L   M+ RG+ P+++TY T+IDG C
Sbjct: 190 MMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K   ++ A  V++ M     KP+   YN +I+G            +L+     GL  D  
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TY +L+N    NG+  EA  +F  M   GI  N   Y ILI+     G   +  +L+ +M
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           + +G+ PD+  +  + T ++K    +E + + + M   G+SPD   Y A+I  L      
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429

Query: 655 EDQV 658
           +D V
Sbjct: 430 DDAV 433


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 262/556 (47%), Gaps = 22/556 (3%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD-----SYEICKATPAV 148
           +  +   + +L+   R D A LL   L +A        L  L D     SY I      V
Sbjct: 29  VRPAAPFLAVLLRRGRADAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNI------V 82

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH---AWNNFLSHLVKLNEIGRFWKLYK 205
             AL   C + G    A  ++  +  + H  +     ++   +  L           L +
Sbjct: 83  LAAL---CRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLR 139

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            M + G   +V T+  +I  LC   +L+ AL L   M  SG+ PNV+ ++ ++   C+ G
Sbjct: 140 SMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSG 199

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
             +   K+F +M  +    V P+ +     I+  CK GR+  A +++  M++ G++ NV 
Sbjct: 200 RWQDVSKVFEEMSRLG---VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVV 256

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  LI+   + GS  EAL L +EM  +G+ P+ V YN+ I  L    +++GA+ +L +M
Sbjct: 257 TYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM 316

Query: 386 I--DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           I  D  + PD  T++ +  GLC+ G ++QA  +   + E   + +  +YN LI    + +
Sbjct: 317 IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVH 376

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  L+S +I  GL PD  TY  LI+G+ K   ++ A      M +   +  L  Y 
Sbjct: 377 KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYI 436

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            ++  LC+   ++ A  L         LDA+ Y+T++ G   +G I  A  +  +M + G
Sbjct: 437 PLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEG 496

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +A + V Y+ILIN   K G  ++A  ++K M   G +PD   + +L+  +S      +++
Sbjct: 497 LAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKIL 556

Query: 624 ELHDDMVLSGVSPDNQ 639
           +L  +M    V+ D +
Sbjct: 557 DLIHEMRAKNVAIDPK 572



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 235/488 (48%), Gaps = 50/488 (10%)

Query: 213 VENVNTFNLVIYALCKEC-KLEEALSLYYRMLKSG---IWPNVVCFNMIINEACQVGDLE 268
           V +  ++N+V+ ALC+    L +ALSL   M +       PN V + M++   C     +
Sbjct: 73  VRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTD 132

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ L R M       V  + VT+  +I G C    ++ A E+   M  +G+  NV  Y+
Sbjct: 133 EAVALLRSM---QASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYS 189

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+ GY R G  ++  ++ +EM + G+ P+ +++   I  L  +G +  A+ V   M+ +
Sbjct: 190 CLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQR 249

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+  TY++L   LC+ G V++A  L N++ ++ +  D  +YN LI  L     +  A
Sbjct: 250 GLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGA 309

Query: 449 KQLLSSMIVRGLI--PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
             LL  MI    +  PD++T+ ++I G CK G +  A+ V E M +     NLV YN +I
Sbjct: 310 MGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLI 369

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY-----------FIN-------- 546
            G  +   ++ A +L+      GL  D+ TY+ LING+           F+         
Sbjct: 370 GGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIR 429

Query: 547 ----------------GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
                           G + +A  +F+EM ++   ++ V Y+ ++   CK G  + A++L
Sbjct: 430 AELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQL 488

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           ++ M+  G+ PD VTY+ L+  F+K    EE   +   M  SG  PD   ++++I     
Sbjct: 489 LQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGY-- 546

Query: 651 EKSAEDQV 658
             SAE Q+
Sbjct: 547 --SAEGQI 552



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 14/230 (6%)

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDI---ITYGTLIDGYCK-GGNIEGAVQVYENM 490
           L+N   ++  +  A  LLS+      +PD+   ++Y  ++   C+ GG++  A+ +  +M
Sbjct: 50  LLNRRLRAAPVTEACSLLSA------LPDVRDAVSYNIVLAALCRRGGDLRQALSLLADM 103

Query: 491 KK---VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
            +      +PN V Y  ++ GLC     D A +LL++ Q  G+  D +TY TLI G    
Sbjct: 104 SREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDA 163

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            ++  A  +  EM   G+  N + Y+ L+   C+ G +Q   ++ + M   G+ PD + +
Sbjct: 164 AELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMF 223

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           T  +    K     + +++ D MV  G+ P+  TYN +I+ L  E S  +
Sbjct: 224 TGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVRE 273


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 243/497 (48%), Gaps = 40/497 (8%)

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNV 251
           KL  I      +  M     + +V  F L++  + K      A+SL   M  S GI P+ 
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
              N++IN  C +  + F    F  +G M    + P+ VT   +ING C  G V  A E+
Sbjct: 112 FILNVVINSLCHLKLVAFG---FSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVEL 168

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              + K G   +V+TY  LI+G  + G + EA+    +M +R   PN VVY++ +  L  
Sbjct: 169 VDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCK 228

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +G V  AL +  +M  K I P+  TY+ L +GLC  G  K+A  L +++++  ++ D  S
Sbjct: 229 DGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            NIL++ LCK   +  AK ++  MI+ G +PD+ TY +LID YC    ++ A +V+E M 
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMV 348

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY------- 543
                P++V Y S+I+G CK  +++ A  LL    ++G   D +T+ TLI G+       
Sbjct: 349 SRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPL 408

Query: 544 -----FIN----GKI-------------------AEAFAMFSEMRNVGIAVNKVGYNILI 575
                F+N    G++                   +EA ++F  M    + +N V Y+I++
Sbjct: 409 AAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIIL 468

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           + +C  G    A EL   +   G+  +   YT ++  F+K    ++  +L  +M  +G  
Sbjct: 469 DGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCM 528

Query: 636 PDNQTYNAIISPLLGEK 652
           PD+ TYN  +  L+ E+
Sbjct: 529 PDSCTYNVFVQGLVAER 545



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/567 (23%), Positives = 254/567 (44%), Gaps = 21/567 (3%)

Query: 60  NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
           N + N+  S   KS   AL F+  + + N     ++ +  ++  +V  + +  A+ L+  
Sbjct: 42  NFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFT-LLLGFIVKMKHYTTAISLVKE 100

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           + S+  + P  F                + + ++ +   +      + V+  +   G   
Sbjct: 101 MHSSLGIKPDTF----------------ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEP 144

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +   ++ L    ++GR  +L   +   GY  +V T+ ++I  LCK  K  EA+   
Sbjct: 145 SVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWL 204

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M +    PNVV ++ +++  C+ G +  AL L  +M   SG  + PN VT+ C+I G 
Sbjct: 205 RKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEM---SGKGIKPNLVTYTCLIQGL 261

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C  GR + A  +   M+K G+  ++++   L+D   + G   +A  +   M+  G +P+ 
Sbjct: 262 CNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDV 321

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YNS I     +  ++ A  V   M+ +   PD   Y+ L  G C+   + +A  L ++
Sbjct: 322 FTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDE 381

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +++     D  ++  LI   C+     AAK+L  +M   G +P++ T   ++DG CK   
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           +  A+ ++  M+K     N+VIY+ I++G+C    L+ A  L       GL ++   Y  
Sbjct: 442 LSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +ING+   G + +A  + S M   G   +   YN+ +  L       ++ + + +M   G
Sbjct: 502 MINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIEL 625
              D  T   ++   S N    E+ E 
Sbjct: 562 FSVDATTTEMIINYLSTNQGDNELREF 588



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 5/252 (1%)

Query: 405 CRNGCVK---QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR-GL 460
           C++G +K   +A    + + + + +     + +L+ ++ K  +   A  L+  M    G+
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD      +I+  C    +     V   M K+  +P++V +  +INGLC    +  A  
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L+   ++ G   D  TY  LING    GK +EA     +M       N V Y+ +++ LC
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A  L   M   GI P+ VTYT L+         +E   L D+M+  GV PD Q
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 640 TYNAIISPLLGE 651
           + N ++  L  E
Sbjct: 288 SLNILVDVLCKE 299


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 240/450 (53%), Gaps = 5/450 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L + M S G   +V T+  +I  LC   ++++A+ L   M +SGI PNVV ++ ++   C
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  E   K+F +M   S   + P+ V +  +I+  CK+G+ + A  +   M++ G++ 
Sbjct: 197 KSGRWEDVGKVFVEM---SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY  LI+   + GS +EA+ +  +M ++G+ P+ V YN+ I  L    +++ A+++L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 383 SDMI-DKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
            +M+  K+I  P+  T++ + +GLC  G ++QAF++   + E   + +  +YN+LI  L 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           + + +  A +L+  M   GL PD  TY  LI G+CK   ++ A  +   M+    +P L 
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            Y  ++  +C+   ++ A++L         LD + Y+T+I+G    G +  A  +   + 
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           + G+  + V Y+I+IN   K G  + A  ++K M   G +PD   + +L+  +S      
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEIN 553

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +V+EL  +M+   ++ D++  + + + L+ 
Sbjct: 554 KVLELIREMITKNIALDSKIISTLSTSLVA 583



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 234/481 (48%), Gaps = 7/481 (1%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L+ +  C+     +  L+RA       + A  +++ ++  G    +  +   +  L    
Sbjct: 105 LEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAA 164

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           E+ +  +L  EM   G   NV  ++ ++   CK  + E+   ++  M + GI P+VV + 
Sbjct: 165 EVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYT 224

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I+  C+VG    A K    M +M    + PN VT+N +IN  CK G V+ A  +   M
Sbjct: 225 GLIDSLCKVGK---AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKM 281

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV--KRGLMPNNVVYNSTIHWLFAEG 373
            + G+  +V TY TLI G +     +EA+ L +EMV  K  + PN V +NS I  L   G
Sbjct: 282 SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            +  A  V + M +     +  TY++L  GL R   V++A +L +++    +  D+++Y+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ILI   CK   +  A+ LLS+M  RG+ P++  Y  L+   C+ G +E A  ++  M   
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN- 460

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
               ++V Y+++I+G CK   L  AK LL++    GL  DA+TY+ +IN +  +G +  A
Sbjct: 461 NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAA 520

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  +M   G   +   ++ LI      G   +  EL++ MI   I  D    +TL T 
Sbjct: 521 NGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTS 580

Query: 613 F 613
            
Sbjct: 581 L 581



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 246/514 (47%), Gaps = 41/514 (7%)

Query: 108 RRFDDALLLMGNLMSA----NSVSPLEFLEGLLDSYEICKATP--------------AVF 149
           R  D A+ L+ ++ SA    + V+    + GL D+ E+ KA                 V+
Sbjct: 129 RLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY 188

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
            +L++   + G  E    V  ++  KG    +  +   +  L K+ +  +   +   MV 
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   NV T+N++I  +CKE  ++EA+ +  +M + G+ P+VV +N +I     V +++ 
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+ L  +M V   + V PN VT N +I G C +GR+  A ++R  M + G   N+ TY  
Sbjct: 309 AMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNL 367

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI G  R     +A+ L DEM   GL P++  Y+  I        V+ A  +LS M D+ 
Sbjct: 368 LIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           I P+ F Y  L   +C  G +++A  L N+ ++ +   D  +Y+ +I+  CK+ +L  AK
Sbjct: 428 IEPELFHYIPLLVAMCEQGMMERARNLFNE-MDNNFPLDVVAYSTMIHGACKAGDLKTAK 486

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +LL S++  GL PD +TY  +I+ + K G++E A  V + M      P++ +++S+I G 
Sbjct: 487 ELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGY 546

Query: 510 CKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
                ++    L++   ++ I  LD+   +TL      +    E  A+   + +    ++
Sbjct: 547 STKGEINKVLELIREMITKNIA-LDSKIISTLSTSLVASN---EGKALLQSLPDFSAEIS 602

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           K             G     +ELMKV  LH + P
Sbjct: 603 K-------------GNINSPQELMKV--LHNVCP 621



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 203/434 (46%), Gaps = 37/434 (8%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           + V +N ++   C+ G  + A  L R M +    +  PN+V++  ++   C     + A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            +  +M  AG+  +V TY TLI G       ++A+ L  EM + G+ PN VVY+S +   
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G  E    V  +M +K I PD   Y+ L   LC+ G  K+A  + + ++   +  + 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            +YN+LIN +CK  ++  A  +L  M  +G+ PD++TY TLI G      ++ A+ + E 
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 490 MKKVEK--KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFIN 546
           M + +   KPN+V +NS+I GLC    +  A  +    +  G +++ +TYN LI G    
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP----- 601
            K+ +A  +  EM ++G+  +   Y+ILI   CK     +A +L+  M   GI P     
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 602 -----------------------------DYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
                                        D V Y+T++    K    +   EL   +V  
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 633 GVSPDNQTYNAIIS 646
           G++PD  TY+ +I+
Sbjct: 496 GLTPDAVTYSIVIN 509



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 4/227 (1%)

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR---GLIPDIITYGTLIDGYCKGGNIEG 482
           V DA SYN ++  LC+  +   A  LL +M +       P+ ++Y  L+   C     + 
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           AV +  +M+    + ++V Y ++I GLC  A +D A  L+      G+  + + Y++L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           GY  +G+  +   +F EM   GI  + V Y  LI+ LCK G  ++A  +M +M+  G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + VTY  L+    K  S +E I +   M   GV+PD  TYN +I  L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK---KPNLVIYNSIINGLCKDASLDA 517
           + D ++Y T++   C+ G+ + A  +   M        +PN V Y  ++  LC D   D 
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A  LL++ +  G+  D +TY TLI G     ++ +A  +  EM   GI  N V Y+ L+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             CK G ++   ++   M   GI PD V YT L+    K    ++   + D MV  G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 637 DNQTYNAIISPLLGEKSAEDQV 658
           +  TYN +I+ +  E S ++ +
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAI 275


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 234/454 (51%), Gaps = 16/454 (3%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +LY  M S     +  + + ++ AL        A +L+  M +  +      FN+++   
Sbjct: 109 RLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHL 164

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGI 320
           C  G    AL+L R+M         PN+VT+N +I GFC  GRV+ A +I   M  + GI
Sbjct: 165 CSAGKPARALELLRQM-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGI 217

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGAL 379
             N  TY T+I G+ + G  +EA+++ DEM+ +G + P  V+YN+ I     +G ++ AL
Sbjct: 218 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 277

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M+++ +     TY++L   L  +G   +A++L  ++  + +  D ++YNILIN  
Sbjct: 278 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGH 337

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK  N+  A ++  +M  RG+   ++TY +LI    K G ++   ++++   +   +P+L
Sbjct: 338 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 397

Query: 500 VIYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           V+YN++IN      ++D A  ++     +RI   D +TYNTL+ G  + G++ EA  +  
Sbjct: 398 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP-DDVTYNTLMRGLCLLGRVDEARKLID 456

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   GI  + V YN LI+     G  + A  +   M+  G  P  +TY  L+    KN 
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 516

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             ++   +  +MV +G++PD+ TY ++I  L  E
Sbjct: 517 QGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 186/371 (50%), Gaps = 7/371 (1%)

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           + T N ++   C  G+   A E+   M +     N  TY T+I G+   G  + AL +  
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 349 EMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCR 406
           EM +RG + PN   Y + I      G V+ A+ V  +M+ K  + P+   Y+ L  G C 
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A    ++++E  +     +YN+L++ L        A +L+  M  +GL  D+ T
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI+G+CK GN++ A++++ENM +   +  +V Y S+I  L K   +     L   + 
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R G+  D + YN LIN +  +G I  AF +  EM    IA + V YN L+  LC  G   
Sbjct: 390 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 449

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +AR+L+  M   GI PD VTY TL++ +S     ++ + + ++M+  G +P   TYNA+I
Sbjct: 450 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 509

Query: 646 SPLLGEKSAED 656
             L      +D
Sbjct: 510 QGLCKNGQGDD 520



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 194/372 (52%), Gaps = 15/372 (4%)

Query: 160 GATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVN 217
           G  + A D++++++ +G  + + + +   +S   K+  +    K++ EM++ G V+    
Sbjct: 199 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 258

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +N +I   C + KL+ AL    RM++ G+   V  +N++++     G    A +L  +M
Sbjct: 259 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 318

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           G   G  +  +  T+N +ING CK G V+ A EI   M + G+   V TY +LI   ++ 
Sbjct: 319 G---GKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKK 375

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +E  +L DE V+RG+ P+ V+YN+ I+     G+++ A  ++ +M  K I PD  TY
Sbjct: 376 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 435

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L +GLC  G V +A KL +++ +  +  D  +YN LI+      ++  A ++ + M+ 
Sbjct: 436 NTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 495

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD----- 512
           +G  P ++TY  LI G CK G  + A  + + M +    P+   Y S+I GL  +     
Sbjct: 496 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 555

Query: 513 -----ASLDAAK 519
                A+ DAAK
Sbjct: 556 DDERLAAADAAK 567



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 194/398 (48%), Gaps = 26/398 (6%)

Query: 30  STEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSEF--RKSPKLALEFYTWVGE 86
           +T +I+ R +C      R  ++L QM P       N V++ F  R   + AL+    + E
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 213

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------EGLL 136
               + +  +   ++       R D+A+ +   +++   V P   +          +G L
Sbjct: 214 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 273

Query: 137 DSYEICK---------ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           D+  + +          T A ++ LV A    G    AY++++++  KG ++ +  +N  
Sbjct: 274 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNIL 333

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           ++   K   + +  ++++ M   G    V T+  +IYAL K+ +++E   L+   ++ GI
Sbjct: 334 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 393

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P++V +N +IN     G+++ A   F  MG M    + P+ VT+N ++ G C LGRV+ 
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRA---FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A ++   M K GI  ++ TY TLI GY+  G  ++ALR+ +EM+ +G  P  + YN+ I 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
            L   G  + A  ++ +M++  I PD  TY  L +GL 
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 261/515 (50%), Gaps = 12/515 (2%)

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           LLD Y        V+ A +RA  ++   +GA  ++ +++ +G  VS   +N  +  L K 
Sbjct: 194 LLDEY--------VYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKN 245

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             +     +   M++ G   +  T   ++Y  C+  +L+ AL +   M + G  P+    
Sbjct: 246 QRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANC 305

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           + +++   + G +E A +L  ++G +    ++PN   +N ++N  CK G    A+ +   
Sbjct: 306 SFMLDGLRKKGRVEEAFRLACQLGELR---MVPNIFAYNALLNNMCKNGMFSEADRLVNE 362

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M   G++ N  TYA LI    + G  ++AL + D M ++G+      YNS I+    + D
Sbjct: 363 MSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDD 422

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A+  LS+M++  + P+  +YS +  GLCR G +  A +LH ++ E+ +  + Y++  
Sbjct: 423 LDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTA 482

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN  CK+  +  A +L + M    L P+ +T+  +I+GYC  G+I  A Q+Y+ M    
Sbjct: 483 LINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRG 542

Query: 495 KKPNLVIYNSIINGLC-KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             P+   Y S+I+GLC  D +  A + +        +L+  +   L++G+   G++ EA+
Sbjct: 543 LTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAY 602

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +++EM   G  ++ + + I++    K    +++  L + M   G+ PD V +T ++  +
Sbjct: 603 HVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMY 662

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           SK  +  + +   D+M+  G  P+  TY A+++ L
Sbjct: 663 SKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNL 697



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 245/522 (46%), Gaps = 40/522 (7%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E A+ +  +L       +I A+N  L+++ K        +L  EM   G   N  T+
Sbjct: 316 GRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTY 375

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            ++I++LCK   +++AL +  RM + G+   V  +N +IN  C+  DL+ A+    +M  
Sbjct: 376 AILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVE 435

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +    + PN+ +++ +I G C+ G +  A E+   M + G+  N  T+  LI+G+ +   
Sbjct: 436 IG---LTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKK 492

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY-- 397
            +EA RL ++M +  L PN V +N+ I      GD+  A  +   M+ + + PD++TY  
Sbjct: 493 MDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRS 552

Query: 398 -------------------------SILTK--------GLCRNGCVKQAFKLHNQVLEEH 424
                                    S+L K        G CR G + +A+ + N++    
Sbjct: 553 LISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWG 612

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              D  S+ I++    K ++   +  L   M  +G+ PD + +  +I+ Y K GN+  A+
Sbjct: 613 GKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQAL 672

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
             ++ M      PN V Y +++N LCK   L +A+ L +       L ++ T+N  ++ +
Sbjct: 673 NCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYF 732

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G +  A  ++  M   G   N V  N LI   CK G  Q+A +L+     +G  PD 
Sbjct: 733 ATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDC 791

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           ++Y+T++    K     E IEL ++M+  GV PD   YN +I
Sbjct: 792 ISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILI 833



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 226/475 (47%), Gaps = 4/475 (0%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           H  +  L  LVK+ +      L+  M+  G + +   +   I A C+   L+ A  L  R
Sbjct: 163 HTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVAR 222

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M   G   + V +N++I   C+   +  A+ +      M    V  + VT   ++ GFC+
Sbjct: 223 MQDEGDKVSAVPYNVLIYGLCKNQRVREAVDV---KNSMLARGVAADEVTCRTLVYGFCR 279

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
              ++ A E+   M + G   +    + ++DG  + G  EEA RL  ++ +  ++PN   
Sbjct: 280 TEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFA 339

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ ++ +   G    A  ++++M DK + P+  TY+IL   LC+ G +  A  + +++ 
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E+ +    Y YN LIN  CK ++L  A   LS M+  GL P+  +Y  +I G C+ G++ 
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLS 459

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
           GAV+++  M +     N   + ++ING CK   +D A  L        L  + +T+N +I
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            GY + G I +AF ++ +M   G+  +   Y  LI+ LC      +A+E +  +  +  +
Sbjct: 520 EGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSV 579

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +  + T L+  F +     E   + ++M + G   D  ++  I+   L +  +E
Sbjct: 580 LNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSE 634



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 212/442 (47%), Gaps = 39/442 (8%)

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S G   + +T + ++++L K  +   A  L+  ML SG+  +   +   I   C+V +L
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L  +M    GD V  ++V +N +I G CK  RV  A +++ +M+  G+  +  T 
Sbjct: 214 DGAKGLVARMQD-EGDKV--SAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTC 270

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL+ G+ R    + AL +  +M + G +P+                             
Sbjct: 271 RTLVYGFCRTEELDMALEMTGDMARLGFVPSEA--------------------------- 303

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                     S +  GL + G V++AF+L  Q+ E  MV + ++YN L+N +CK+   + 
Sbjct: 304 --------NCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSE 355

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L++ M  +GL P+ +TY  LI   CK G ++ A+ + + M++   +  +  YNS+IN
Sbjct: 356 ADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLIN 415

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             CK   LD A   L     IGL  +A +Y+ +I G    G ++ A  +  +M   G+A 
Sbjct: 416 CCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAW 475

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N   +  LIN  CK     +A  L   M    + P+ VT+  ++  +       +  +L+
Sbjct: 476 NTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLY 535

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           D M+  G++PDN TY ++IS L
Sbjct: 536 DQMMCRGLTPDNYTYRSLISGL 557



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 1/342 (0%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           + AGI  +  T + ++    +      A  L D M+  G++ +  VY + I       ++
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +GA  +++ M D+        Y++L  GLC+N  V++A  + N +L   +  D  +   L
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +   C++  L  A ++   M   G +P       ++DG  K G +E A ++   + ++  
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
            PN+  YN+++N +CK+     A  L+      GL  + +TY  LI+     G + +A  
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           M   MR  G+ +    YN LIN  CK      A   +  M+  G+ P+  +Y+ ++    
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLC 453

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +       +ELH  M   GV+ +  T+ A+I+     K  ++
Sbjct: 454 RKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDE 495



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 170/361 (47%), Gaps = 4/361 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+A++     +G    A+ +  ++  +G +   + + + +S L   +   +  +   ++
Sbjct: 514 TFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            +   V N  +   +++  C+E +L EA  ++  M   G   +++ F +I+  A +  D 
Sbjct: 574 ENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDS 633

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E +  LFR+M       V P++V H C+IN + K G +  A      MI  G   N  TY
Sbjct: 634 EKSCVLFREM---KEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTY 690

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++   +      A  LC EM+    +PN+  +N  + +   EG++E A  +   M+ 
Sbjct: 691 TALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ 750

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  +  + + L KG C+ G +++A  L ++  E     D  SY+ +I+ LCK  ++  
Sbjct: 751 GFLA-NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINE 809

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L + M+ +G+ PDI+ Y  LI      G  +  + +Y +M K   +PN   + ++  
Sbjct: 810 AIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFV 869

Query: 508 G 508
           G
Sbjct: 870 G 870


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 233/454 (51%), Gaps = 16/454 (3%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +LY  M S     +  + + ++ AL        A +L+  M +  +      FN+++   
Sbjct: 69  RLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHL 124

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGI 320
           C  G    AL+L R+M         PN+VT+N +I GFC  GRV+ A +I   M  + GI
Sbjct: 125 CSAGKPARALELLRQM-------PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGI 177

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGAL 379
             N  TY T+I G+ + G  +EA+++ DEM+ +G + P  V+YN+ I     +G ++ AL
Sbjct: 178 APNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTAL 237

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M+++ +     TY++L   L  +G   +A++L  ++  + +  D ++YNILIN  
Sbjct: 238 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 297

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK  N+  A ++  +M  RG+   ++TY  LI    K G ++   ++++   +   +P+L
Sbjct: 298 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357

Query: 500 VIYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           V+YN++IN      ++D A  ++     +RI   D +TYNTL+ G  + G++ EA  +  
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP-DDVTYNTLMRGLCLLGRVDEARKLID 416

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   GI  + V YN LI+     G  + A  +   M+  G  P  +TY  L+    KN 
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 476

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             ++   +  +MV +G++PD+ TY ++I  L  E
Sbjct: 477 QGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 7/371 (1%)

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           + T N ++   C  G+   A E+   M +     N  TY T+I G+   G  + AL +  
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 349 EMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCR 406
           EM +RG + PN   Y + I      G V+ A+ V  +M+ K  + P+   Y+ L  G C 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A    ++++E  +     +YN+L++ L        A +L+  M  +GL PD+ T
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI+G+CK GN++ A++++ENM +   +  +V Y ++I  L K   +     L   + 
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R G+  D + YN LIN +  +G I  AF +  EM    IA + V YN L+  LC  G   
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +AR+L+  M   GI PD VTY TL++ +S     ++ + + ++M+  G +P   TYNA+I
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 469

Query: 646 SPLLGEKSAED 656
             L      +D
Sbjct: 470 QGLCKNGQGDD 480



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 194/372 (52%), Gaps = 15/372 (4%)

Query: 160 GATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVN 217
           G  + A D++++++ +G  + + + +   +S   K+  +    K++ EM++ G V+    
Sbjct: 159 GRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV 218

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +N +I   C + KL+ AL    RM++ G+   V  +N++++     G    A +L  +M
Sbjct: 219 MYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 278

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           G   G  + P+  T+N +ING CK G V+ A EI   M + G+   V TY  LI   ++ 
Sbjct: 279 G---GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKK 335

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  +E  +L DE V+RG+ P+ V+YN+ I+     G+++ A  ++ +M  K I PD  TY
Sbjct: 336 GQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTY 395

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L +GLC  G V +A KL +++ E  +  D  +YN LI+      ++  A ++ + M+ 
Sbjct: 396 NTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 455

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD----- 512
           +G  P ++TY  LI G CK G  + A  + + M +    P+   Y S+I GL  +     
Sbjct: 456 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 515

Query: 513 -----ASLDAAK 519
                A+ DAAK
Sbjct: 516 DDERLAAADAAK 527



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 193/398 (48%), Gaps = 26/398 (6%)

Query: 30  STEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSEF--RKSPKLALEFYTWVGE 86
           +T +I+ R +C      R  ++L QM P       N V++ F  R   + AL+    + E
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 173

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------EGLL 136
               + +  +   ++       R D+A+ +   +++   V P   +          +G L
Sbjct: 174 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 233

Query: 137 DSYEICK---------ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           D+  + +          T A ++ LV A    G    AY++++++  KG +  +  +N  
Sbjct: 234 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 293

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           ++   K   + +  ++++ M   G    V T+  +IYAL K+ +++E   L+   ++ GI
Sbjct: 294 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 353

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P++V +N +IN     G+++ A   F  MG M    + P+ VT+N ++ G C LGRV+ 
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRA---FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A ++   M + GI  ++ TY TLI GY+  G  ++ALR+ +EM+ +G  P  + YN+ I 
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
            L   G  + A  ++ +M++  I PD  TY  L +GL 
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 221/417 (52%), Gaps = 4/417 (0%)

Query: 93  SLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDA 151
           +L+S C ++H L   +   +A  L+  ++S     S       +L++    ++   VF  
Sbjct: 1   TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+ A  + G    A +  +  +     V        L H++KL      W  Y+E++ CG
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           Y  ++  FN++++  CKE  +  A S++  + K G+ P+VV FN ++N   ++GDL+   
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG- 179

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
             FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ TLI
Sbjct: 180 --FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLI 237

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           DG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M  K + 
Sbjct: 238 DGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 297

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+      A+++
Sbjct: 298 PDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKV 357

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 358 LREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 158/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    EGD+  A  V + +    + P   +++ L  G  R 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   M+ +GL+P+ +T+
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 233

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 234 TTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 293

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G Y  
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLD 353

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K        +L  +M   G  P   TYN +++
Sbjct: 354 AEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 157/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 129 NILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 188

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C++G V  
Sbjct: 189 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDL 248

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 249 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLID 308

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M +   + + V Y ++I+GLC++     A+ +L+     GL  
Sbjct: 309 GCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKP 368

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G +     +  EM+  G   + V YN+L+N
Sbjct: 369 DTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 133/242 (54%), Gaps = 1/242 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ + +++   GL P ++++ TL
Sbjct: 107 KLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTL 166

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 167 MNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGL 226

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  +G++  A  ++ +M +  ++ + + YN LI  LCK G  +QA +
Sbjct: 227 VPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHD 286

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 287 LIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLC 346

Query: 650 GE 651
            E
Sbjct: 347 QE 348



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 1/190 (0%)

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  L+  +CK G+I  A  V+  + K   +P++V +N+++NG  +   LD    L  A  
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D  TY+ LING     K+ +A  +F EM + G+  N V +  LI+  CK G   
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A E+ K M+   + PD +TY TL+    K    ++  +L D+M + G+ PD  TY  +I
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307

Query: 646 SPLLGEKSAE 655
                E   E
Sbjct: 308 DGCCKEGDLE 317



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/244 (20%), Positives = 96/244 (39%), Gaps = 52/244 (21%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L+ AK L+  ++ R                      DI  +  LI 
Sbjct: 4   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 63

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
            Y + G +  A++ Y    ++ ++    +              D  + +L+   ++    
Sbjct: 64  AYLESGFLRDAIECY----RLTREHKFWV------------PFDTCRKVLEHMMKL---- 103

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
              Y  L+ G++             E+   G   +   +NIL++  CK G  + A+ +  
Sbjct: 104 --KYFKLVWGFY------------EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFN 149

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            +   G+ P  V++ TL+  + +    +E   L   M  SGV PD  TY+ +I+ L  E 
Sbjct: 150 AITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKES 209

Query: 653 SAED 656
             +D
Sbjct: 210 KMDD 213


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 220/420 (52%), Gaps = 4/420 (0%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAV 148
           F H+L S C ++H L   +   +A  L+  ++S     S       +L++    ++   V
Sbjct: 1   FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYV 60

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+ A  + G    A +  +  +     V        L HL+KL      W  Y+E++
Sbjct: 61  FSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 120

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
            CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++GDL+
Sbjct: 121 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 180

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
                FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ 
Sbjct: 181 EG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFT 237

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLIDG  + G  + A+ +   M+ + L+P+ + YN+ I+ L  +GD++ A  ++ +M  K
Sbjct: 238 TLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 297

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ LC+      A
Sbjct: 298 GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 357

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           +++L  M+   L PD  TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 358 EKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 132 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 191

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 192 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDL 251

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ ++L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 252 AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 311

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++  S+DA K L +        
Sbjct: 312 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKP 371

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G A + V YN+L+N
Sbjct: 372 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 416



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 117 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 176

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GLIP+ +T+
Sbjct: 177 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 236

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 237 TTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 296

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 297 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 356

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+   + PD  TYT ++  F K     +  +L  +M   G +P   TYN +++
Sbjct: 357 AEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 416



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 110 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 169

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 170 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 229

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G   NG++  A  ++  M +  +  + + YN LI  LCK G  +QA +
Sbjct: 230 IPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 289

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 290 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 349

Query: 650 GEKSAED 656
            E  + D
Sbjct: 350 QEGRSVD 356


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 245/511 (47%), Gaps = 12/511 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ T  +++ L+ A       +    +   +K  G   +++ +N  L  L K N +    
Sbjct: 145 CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGAC 204

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL  EM + G   +V ++  VI ++ K  K+EEA  L  R       PNV  +N +IN  
Sbjct: 205 KLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIR-----FQPNVSVYNALINGF 259

Query: 262 CQVGDLEFALK-LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           C+    E+ +K +F  +G M    + PN +T++ +I+    +G VE A  +   M   G 
Sbjct: 260 CR----EYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGC 315

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV T+ +L+ GY   G   EAL + + M + G  PN V YN+ IH L + G +  A+ 
Sbjct: 316 SPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVS 375

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V S M      P+  TY  L  G  + G +  A ++ N+++    + +   Y  ++N LC
Sbjct: 376 VSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLC 435

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +S+  + A  L+  M      P+ +T+ T I G C  G +E A+ ++  M++    PN+ 
Sbjct: 436 RSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIK 495

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN +++GL K+  +  A  L+   +  G+ L+ +TYNT+  G+   GK  EA  +  +M
Sbjct: 496 TYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKM 555

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG-IIPDYVTYTTLVTRFSKNCS 618
              G+  + + YN L    C  G  + A +L+  +   G  +P+   YT+L+        
Sbjct: 556 LVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIG 615

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            EE +   D M+  G+  +  T+NA++  L 
Sbjct: 616 VEEAVLYLDKMLNEGICLNAATWNALVRGLF 646



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 209/443 (47%), Gaps = 15/443 (3%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF--- 274
           T+ ++I  L +EC ++    L  +M   GI  +   F  +IN   +VG  E ALK+F   
Sbjct: 81  TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R+ G        P    +N +++      R +  E I   M + G + NV TY  L+   
Sbjct: 141 REFGCQ------PTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKAL 194

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            +    + A +L  EM  +G  P+ V Y + I  +   G VE A       +     P+ 
Sbjct: 195 CKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-----RELSIRFQPNV 249

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
             Y+ L  G CR   VK+ F L  Q++E+ +  +  +Y+ +I+ L    N+  A  + + 
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAK 309

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M VRG  P++ T+ +L+ GY   G +  A+ ++  M +   +PN+V YN++I+GLC    
Sbjct: 310 MFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGK 369

Query: 515 LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  A S+    +R G    + TY  LI+G+   G +  A  ++++M   G   N V Y  
Sbjct: 370 MGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTS 429

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           ++N LC+   + QA  L++ M      P+ VT+ T +     +   E  I L   M   G
Sbjct: 430 MVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYG 489

Query: 634 VSPDNQTYNAIISPLLGEKSAED 656
            SP+ +TYN ++  LL E   ++
Sbjct: 490 CSPNIKTYNEVLDGLLKENRIKE 512



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 163/358 (45%), Gaps = 11/358 (3%)

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           +GN+  A +V    F+ G       C      F +L++     G    A ++  ++  +G
Sbjct: 297 IGNVELALAVWAKMFVRG-------CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG 349

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
              ++ A+N  +  L    ++G    +  +M   G   NV+T+  +I    K   L  A 
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGAS 409

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            ++ +M+ +G  PNVV +  ++N  C+      A  L  K   MS D+  PN+VT N  I
Sbjct: 410 EIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK---MSTDNCPPNTVTFNTFI 466

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            G C  GRVE A  +   M + G   N++TY  ++DG  +    +EAL L  EM ++G+ 
Sbjct: 467 KGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGME 526

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            N V YN+        G  E AL +L  M+   + PD  TY+ LT   C  G VK A +L
Sbjct: 527 LNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQL 586

Query: 417 HNQV-LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +++      V +  +Y  L+  +C    +  A   L  M+  G+  +  T+  L+ G
Sbjct: 587 LDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRG 644



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 4/246 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     V+ ++V    +      A+ +I+K+       +   +N F+  L     +    
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L+ +M   G   N+ T+N V+  L KE +++EAL L   M + G+  N+V +N I    
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C VG  E ALKL  KM V     V P+++T+N +   +C  G+V+ A ++   +   G  
Sbjct: 540 CNVGKFEEALKLLGKMLV---GGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKW 596

Query: 322 C-NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              V  Y +L+ G       EEA+   D+M+  G+  N   +N+ +  LF      G + 
Sbjct: 597 VPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIH 656

Query: 381 VLSDMI 386
           +L D++
Sbjct: 657 ILDDIL 662



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 2/217 (0%)

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           S + C      F+  ++     G  E A ++  +++  G S +I  +N  L  L+K N I
Sbjct: 451 STDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRI 510

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
               +L  EM   G   N+ T+N +    C   K EEAL L  +ML  G+ P+ + +N +
Sbjct: 511 KEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTL 570

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
               C  G ++ A++L  K+   +G   +P    +  ++ G C    VE A      M+ 
Sbjct: 571 TYAYCMQGKVKTAIQLLDKLS--AGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLN 628

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            GI  N  T+  L+ G          + + D+++  G
Sbjct: 629 EGICLNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 234/475 (49%), Gaps = 40/475 (8%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F  ++ +L K       LSL+ +M   GI PN V FN++IN  CQ+G + FA  +  K+ 
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M  +   P+++T N  I GFC  G++  A      ++  G   +  +Y TLI+G  + G
Sbjct: 133 KMGYE---PDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 189

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  AL L   +  + +  + V+Y++ I  +  + +V  A  + S+M+ + I  +  TYS
Sbjct: 190 ETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +K A  L N++  E++  D Y++NIL++  CK   +  AK  L+ M+ +
Sbjct: 250 ALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQ 309

Query: 459 GLIPDIITYGTLIDGYC-----------------------------------KGGNIEGA 483
           G+ PDI+TY +L+DGYC                                   K   ++ A
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQA 369

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           +++++ M   +  PN++ YNS+I+GLCK   +  A  L+      G   D ITY+++++ 
Sbjct: 370 MKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDA 429

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              N  + +A A+  ++++ GI  N   Y ILI+ LCK G  + AR + + +++ G    
Sbjct: 430 LCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLT 489

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
             TYT ++  F  +   +E + L   M  +   PD  TY  II  L  +K   D+
Sbjct: 490 VNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLF-DKDENDK 543



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 234/468 (50%), Gaps = 4/468 (0%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           + QK++ +G   +   +N  ++   +L  I   + +  +++  GY  +  T N  I   C
Sbjct: 92  LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
            + ++ +AL+ + +++  G   + V +  +IN  C+VG+   AL+L R+   + G  V  
Sbjct: 152 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRR---VDGKLVQL 208

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           + V ++ II+  CK   V  A ++   M+   I  N+ TY+ LI G+   G  ++A+ L 
Sbjct: 209 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLF 268

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           ++M    + P+   +N  +     EG V+ A   L+ M+ + I PD  TY+ L  G C  
Sbjct: 269 NKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLV 328

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             V  A  + N +    +     SYNI+IN  CK   +  A +L   M  + + P++ITY
Sbjct: 329 NEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITY 388

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            +LIDG CK G I  A+++ + M    ++P+++ Y+SI++ LCK+  +D A +LL   + 
Sbjct: 389 NSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKD 448

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G+  +  TY  LI+G    G++ +A  +F ++   G  +    Y ++I   C  G + +
Sbjct: 449 QGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDE 508

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           A  L+  M  +  IPD +TY  ++         ++  +L  +M+  G+
Sbjct: 509 ALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 208/424 (49%), Gaps = 4/424 (0%)

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +A+SL+  +L+    P  + F  I+    +       L LF+KM       + PN V  N
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRG---IKPNFVNFN 109

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +IN FC+LG + FA  +   ++K G + +  T  T I G+   G   +AL   D++V  
Sbjct: 110 ILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G   + V Y + I+ L   G+   AL +L  +  K +  D   YS +   +C++  V  A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F L+++++   +  +  +Y+ LI+  C    L  A  L + M    + PD+ T+  L+D 
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
           +CK G ++ A      M K   KP++V YNS+++G C    ++ AKS+L      G+   
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTAT 349

Query: 534 I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + +YN +ING+     + +A  +F EM +  I  N + YN LI+ LCK G    A EL+ 
Sbjct: 350 VRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID 409

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           +M   G  PD +TY++++    KN   ++ I L   +   G+ P+  TY  +I  L    
Sbjct: 410 LMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGG 469

Query: 653 SAED 656
             ED
Sbjct: 470 RLED 473



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 234/466 (50%), Gaps = 4/466 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+    Q+G    A+ V+ K+   G+       N F+       +I +    + ++V
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G+  +  ++  +I  LCK  +   AL L  R+    +  +VV ++ II+  C+  ++ 
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L+ +M       +  N VT++ +I+GFC +G+++ A  +   M    I+ +V T+ 
Sbjct: 228 DAFDLYSEM---VSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFN 284

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+D + + G  +EA      M+K+G+ P+ V YNS +       +V  A  +L+ M  +
Sbjct: 285 ILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            +     +Y+I+  G C+   V QA KL  ++  + +  +  +YN LI+ LCKS  ++ A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L+  M  RG  PDIITY +++D  CK   ++ A+ +   +K    +PN+  Y  +I+G
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK   L+ A+++ +     G  L   TY  +I G+  +G   EA ++ S+M++     +
Sbjct: 465 LCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            + Y I+I  L       +A +L++ MI  G++  ++ Y +    F
Sbjct: 525 AITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSF 570



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 206/471 (43%), Gaps = 83/471 (17%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+D+  ++  +  S +I  ++  +S    + ++     L+ +M S     +V TFN+++ 
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           A CKE +++EA +    M+K GI P++V +N +++  C V ++  A  +   +  MS   
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSI---LNTMSHRG 345

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V     ++N +INGFCK+  V+ A ++   M    I  NV TY +LIDG  + G    AL
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L D M  RG  P+ + Y+S +  L     V+ A+ +L  + D+ I P+ +TY+IL  GL
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465

Query: 405 CR-----------------------------------NGCVKQAFKLHNQVLEEHMVGDA 429
           C+                                   +G   +A  L +++ +   + DA
Sbjct: 466 CKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA 525

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY--------------C 475
            +Y I+I  L   +    A++LL  MI RGL+   + YG+    +              C
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQC 585

Query: 476 KGGNIEG-------------AVQVYENMKKVEKK-PNLVIYNSIINGLCKDASLDAAKSL 521
                 G              V    NM+  + + P+++IY                 S 
Sbjct: 586 TSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIY-----------------ST 628

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
              S++  +LD  TY  +I G+  +G   E+ A+ S+M   G   + V Y+
Sbjct: 629 CDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 1/273 (0%)

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           DV  A+ + + ++ ++  P    +  +   L ++        L  ++    +  +  ++N
Sbjct: 50  DVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFN 109

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ILIN  C+   +  A  +L+ ++  G  PD IT  T I G+C  G I  A+  ++ +  +
Sbjct: 110 ILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVAL 169

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEA 552
               + V Y ++INGLCK     AA  LL +   ++  LD + Y+T+I+    +  + +A
Sbjct: 170 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDA 229

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           F ++SEM +  I+ N V Y+ LI+  C  G  + A  L   M    I PD  T+  LV  
Sbjct: 230 FDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDA 289

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           F K    +E       M+  G+ PD  TYN+++
Sbjct: 290 FCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 1/251 (0%)

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           N  V  A  L N +L ++       +  ++  L KS +      L   M  RG+ P+ + 
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  LI+ +C+ G I  A  V   + K+  +P+ +  N+ I G C    +  A +      
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            +G  LD ++Y TLING    G+   A  +   +    + ++ V Y+ +I+ +CK     
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A +L   M+   I  + VTY+ L++ F      ++ I L + M    ++PD  T+N ++
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILV 287

Query: 646 SPLLGEKSAED 656
                E   ++
Sbjct: 288 DAFCKEGRVKE 298



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 150/358 (41%), Gaps = 49/358 (13%)

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
           S+    AT   ++ ++    +I   + A  + +++  K    ++  +N+ +  L K   I
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
               +L   M   G   ++ T++ ++ ALCK   +++A++L  ++   GI PN+  + ++
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C+ G LE A  +F  + ++ G ++  N  T+  +I GFC  G  + A  +   M  
Sbjct: 462 IDGLCKGGRLEDARNIFEDL-LVKGYNLTVN--TYTVMIQGFCSHGLFDEALSLLSKMKD 518

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM----------------PNNVV 361
                +  TY  +I        +++A +L  EM+ RGL+                P + +
Sbjct: 519 NSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFL 578

Query: 362 YNSTIHWLFAEGDVEGALFVL-----------SDMIDKHI-CPDHFTYSILTKGLCRNGC 409
            N ++    ++     A  +L           S+M DK + CP    YS           
Sbjct: 579 NNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWS------ 632

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
            KQ + L           D  +Y ++I   C       +  LLS M V G IPD +TY
Sbjct: 633 -KQGYIL-----------DVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 217/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   +   +A  L+  ++S     S     E +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L H +KL      W  YK
Sbjct: 66  VYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  ++  A E+   MI  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + GS + A+    EM+++G  P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ A     ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK G+++   ++ + M++    P +V
Sbjct: 363 VDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVV 417



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 151/289 (52%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V  ++    + P   +++ L  G  R G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   MI  GL+P+ +T+ 
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G+I+ A++ Y+ M +    P+L+ YN++I GLCK   L  A+ L+      
Sbjct: 246 TLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  A      M    I ++ V Y  LI+ LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F K    +   +L  +M   G  P
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVP 414



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +   + K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  +  A  +  +MI   + P+  T++ L  G C+ G +  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A + + ++L +    D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A+   + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +   G +     +  EM+  G
Sbjct: 380 DNGTYTMIINEFCKKGDVKTGSKLLKEMQRDG 411



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 177/360 (49%), Gaps = 10/360 (2%)

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +V  F+ +I    + G L  AL+ FR   +           T   ++  F KL   +   
Sbjct: 65  DVYVFSGLITAYLESGFLHDALECFR---LTREHKFWVPFDTCRKVLEHFMKLKYFKLVW 121

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
                +++ G   ++  +  L+  + + G    A  + DE+ K GL P+ V +N+ ++  
Sbjct: 122 GFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGY 181

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              GD++    + S M    + PD +TYS+L  GLC+   +  A +L  +++   +V + 
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNG 241

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++  LI+  CK+ ++  A +    M+ +G  PD+ITY TLI G CK G+++ A  + + 
Sbjct: 242 VTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFI 545
           M     KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G   
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIR---LDDVAYTALISGLCR 358

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G+  +A  M  EM +VG+  +   Y ++IN  CK G  +   +L+K M   G +P  VT
Sbjct: 359 EGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +   +   GL P ++++ TL
Sbjct: 118 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ ++ A  L       GL
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+   G I  A   + EM   G + + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E  +     M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 REGQSVD 364



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + +++ +  +     S+N L+N   +  +L    +L S+
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   +  A +++  M      PN V + ++I+G CK  S
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGS 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A    +   R G   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 IDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A    K MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + PDN TY  II+
Sbjct: 377 LKPDNGTYTMIIN 389



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 57/286 (19%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVR------------------GLIPDIITYGTLI 471
           +SY  +I++LC    L  AK L+  ++ R                      D+  +  LI
Sbjct: 14  HSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGLI 73

Query: 472 DGYCKGGNIEGAVQ-------------------VYENMKKVEK----------------K 496
             Y + G +  A++                   V E+  K++                  
Sbjct: 74  TAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECGYP 133

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAM 555
            +L  +N +++  CK+  +  A+S+     + GL  ++ ++NTL+NGY   G + E F +
Sbjct: 134 ASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            S M   G+  +   Y++LIN LCK      A EL   MI +G++P+ VT+TTL+    K
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCK 253

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
             S +  +E + +M+  G SPD  TYN +I  L  +   K A+D +
Sbjct: 254 TGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 243/473 (51%), Gaps = 6/473 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSL 238
           SI + N  LS ++K         L   + S G  + ++ T ++ I +L    ++  A S+
Sbjct: 54  SIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSV 113

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             +++K G   +      ++   C  G    AL L+    V  G S   + V +  +ING
Sbjct: 114 MAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH-AVSKGFSF--DEVCYGTLING 170

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK+G+   A E+   M K G+  N+  Y  ++DG  + G   EA  LC EMV +G+  +
Sbjct: 171 LCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICID 230

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTYSILTKGLCRNGCVKQAFKLH 417
              YNS IH     G  +GA+ +L++M+ K  + PD +T++IL   LC+ G V +A  + 
Sbjct: 231 VFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVF 290

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             +++  +  D  S N L+N  C    ++ AK++   M+ RG +P++I+Y TLI+GYCK 
Sbjct: 291 GLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKV 350

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
             ++ A+++   M +    P+ V YN +++GL K   +     L++A +  G   D ITY
Sbjct: 351 KMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITY 410

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N L++ Y     + +A A+F  + + GI+ N   YNILI+ LCK G  + A+E+ +++ +
Sbjct: 411 NVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSV 470

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            G  P+  TY  ++    +    +E   L  +MV  G  P+  T++ ++  LL
Sbjct: 471 KGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALL 523



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 217/405 (53%), Gaps = 5/405 (1%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P++V  ++ IN    +G +  A  +  K+ V  G  V P ++T   ++ G C  GR   A
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKI-VKRGFGVDPFTLT--TLMKGLCLKGRTFEA 145

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             +    +  G   +   Y TLI+G  + G + +A+ L  +M K G+ PN ++YN  +  
Sbjct: 146 LNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDG 205

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ-VLEEHMVG 427
           L  EG V  A  + S+M+ K IC D FTY+ L  G C  G  + A +L N+ V++E +  
Sbjct: 206 LCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRP 265

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D Y++NIL++ LCK   +A A+ +   MI RGL PD+++   L++G+C  G +  A +V+
Sbjct: 266 DVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVF 325

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFIN 546
           + M +  K PN++ Y+++ING CK   +D A  LL +  QR  + D +TYN L++G   +
Sbjct: 326 DRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKS 385

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
           G++   + +   MR  G A + + YN+L++   K  C  +A  L + ++  GI P+  TY
Sbjct: 386 GRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTY 445

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             L+    K    +   E+   + + G  P+ +TYN +I+ L  E
Sbjct: 446 NILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRRE 490



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 223/465 (47%), Gaps = 5/465 (1%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+ ++M       +  L   LDS    K +       + + T +G    A+ V+ K+  +
Sbjct: 61  LLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKR 120

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G  V        +  L           LY   VS G+  +   +  +I  LCK  K  +A
Sbjct: 121 GFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDA 180

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           + L  +M K G+ PN++ +NM+++  C+ G +  A  L  +   M G  +  +  T+N +
Sbjct: 181 IELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSE---MVGKGICIDVFTYNSL 237

Query: 296 INGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           I+GFC  G+ + A  +   M+ K  +  +V T+  L+D   + G   EA  +   M+KRG
Sbjct: 238 IHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRG 297

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L P+ V  N+ ++     G +  A  V   M+++   P+  +YS L  G C+   V +A 
Sbjct: 298 LEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEAL 357

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L  ++ + ++V D  +YN L++ L KS  +     L+ +M   G  PD+ITY  L+D Y
Sbjct: 358 RLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDY 417

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
            K   ++ A+ +++++      PN+  YN +I+GLCK   + AAK + Q     G    I
Sbjct: 418 LKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNI 477

Query: 535 -TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            TYN +ING    G + EA A+  EM + G   N V ++ L+  L
Sbjct: 478 RTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 2/199 (1%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           P I++   L+    K  +    V +  ++  K   KP+LV  +  IN L     +  A S
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           ++    + G  +D  T  TL+ G  + G+  EA  ++    + G + ++V Y  LIN LC
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G  + A EL++ M   G+ P+ + Y  +V    K     E   L  +MV  G+  D  
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 640 TYNAIISPLLGEKSAEDQV 658
           TYN++I    G    +  V
Sbjct: 233 TYNSLIHGFCGAGQFQGAV 251


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 220/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           + + CGY  ++  FN++++  CKE +++ A S++  + K G+ P  V FN ++N   ++G
Sbjct: 126 DSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  ++++A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 417



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 36/314 (11%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G ++ A+ +  A+ K G+     ++ TL++GY R G  +E  RL + M  
Sbjct: 140 NILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  + ++M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD +TY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++  S+DA K            
Sbjct: 320 GSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK------------ 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                  M  EM +VG+      Y ++IN  CK G      +LM
Sbjct: 368 -----------------------MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 404

Query: 592 KVMILHGIIPDYVT 605
           K M   G +P  VT
Sbjct: 405 KEMQRDGYVPSVVT 418



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 145/276 (52%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG+++ A  V   +    + P   +++ L  G  R G + + F+L N + 
Sbjct: 139 FNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L + M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D +TY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 127/228 (55%), Gaps = 1/228 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y +NIL++  CK   +  A+ +  ++   GL P  +++ TL++GY + G+++   ++   
Sbjct: 137 YFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNA 196

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M+    +P++  Y+ +INGLCK++ +D A  L       GL+ + +T+ TLI+G+  NG+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +  A  ++ +M +  ++ + + YN LI  LCK G  +QA++L+  M + G+ PD VTYTT
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTT 316

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    K    E   E    M+   +  D+  Y A+IS L  E  + D
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G +K A  + + + +  +   A S+N L+N   +  +L    +L ++
Sbjct: 137 YFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A +++  M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +KV Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVY-------------------ENMKKVEK----------------KP 497
            Y + G +  A++ Y                   E++ K++                   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++  CK+  +  A+S+  A  + GL   A+++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 220/416 (52%), Gaps = 4/416 (0%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDAL 152
           L S C ++H L   +   +A  L+  ++S     S       +L++    ++   VF  L
Sbjct: 1   LHSYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGL 60

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           + A  + G    A +  +  +     V        L HL+KL      W  Y+E++ CGY
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++GDL+    
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG-- 178

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
            FR    M  + V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ TLID
Sbjct: 179 -FRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 237

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ + G  + A+ +   M+ + L+P+ + YN+ I+ L   GD++ A  ++ +M  K + P
Sbjct: 238 GHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKP 297

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D FTY+ L  G C+ G +  AFK   ++++E++  D  +Y  LI+ LC+      A+++L
Sbjct: 298 DKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKML 357

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             M+  GL PDI TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 358 REMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 161/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GLIP+ +T+
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK+  L  A  L+     
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSM 292

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVD 352

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M  +G +P   TYN +++
Sbjct: 353 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 412



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 161/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 128 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 187

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 188 NGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDL 247

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ ++L + ++ D  +YN LI  LCK+ +L  A  L+  M ++GL PD  TY TLID
Sbjct: 248 AMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 307

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 308 GCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKP 367

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            I TY  +IN +   G + +   +  EM+  G A + V YN+L+N
Sbjct: 368 DIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 412



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 106 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 165

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 166 MNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 225

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++  M +  +  + + YN LI  LCK G  +QA +
Sbjct: 226 IPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHD 285

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   +    M+   +  D+  Y A+IS L 
Sbjct: 286 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLC 345

Query: 650 GEKSAED 656
            E  + D
Sbjct: 346 QEGQSVD 352



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 1/255 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 53  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFY 112

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+ +A  +F EM   G+  N V +
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    KN   ++  +L D+M +
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSM 292

Query: 632 SGVSPDNQTYNAIIS 646
            G+ PD  TY  +I 
Sbjct: 293 KGLKPDKFTYTTLID 307


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 222/420 (52%), Gaps = 10/420 (2%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A +L+  M +  +      FN+++   C  G    AL+L R+M         PN+VT+N 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM-------PRPNAVTYNT 77

Query: 295 IINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           +I GFC  GRV+ A +I   M  + GI  N  TY T+I G+ + G  +EA+++ DEM+ +
Sbjct: 78  VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTK 137

Query: 354 G-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           G + P  V+YN+ I     +G ++ AL     M+++ +     TY++L   L  +G   +
Sbjct: 138 GEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTE 197

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A++L  ++  + +  D ++YNILIN  CK  N+  A ++  +M  RG+   ++TY +LI 
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 257

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
              K G ++   ++++   +   +P+LV+YN++IN      ++D A  ++   ++  +  
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D +TYNTL+ G  + G++ EA  +  EM   GI  + V YN LI+     G  + A  + 
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 377

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M+  G  P  +TY  L+    KN   ++   +  +MV +G++PD+ TY ++I  L  E
Sbjct: 378 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 187/371 (50%), Gaps = 7/371 (1%)

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           + T N ++   C  G+   A E+   M +     N  TY T+I G+   G  + AL +  
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 349 EMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCR 406
           EM +RG + PN   Y + I      G V+ A+ V  +M+ K  + P+   Y+ L  G C 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +  A    ++++E  +     +YN+L++ L        A +L+  M  +GL PD+ T
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI+G+CK GN++ A++++ENM +   +  +V Y S+I  L K   +     L   + 
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R G+  D + YN LIN +  +G I  AF +  EM    IA + V YN L+  LC  G   
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +AR+L+  M   GI PD VTY TL++ +S     ++ + + ++M+  G +P   TYNA+I
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 396

Query: 646 SPLLGEKSAED 656
             L      +D
Sbjct: 397 QGLCKNGQGDD 407



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 202/392 (51%), Gaps = 15/392 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIG 198
           ++ +     ++ ++      G  + A D++++++ +G  + + + +   +S   K+  + 
Sbjct: 66  QMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVD 125

Query: 199 RFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
              K++ EM++ G V+     +N +I   C + KL+ AL    RM++ G+   V  +N++
Sbjct: 126 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 185

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           ++     G    A +L  +MG   G  + P+  T+N +ING CK G V+ A EI   M +
Sbjct: 186 VHALFMDGRGTEAYELVEEMG---GKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+   V TY +LI   ++ G  +E  +L DE V+RG+ P+ V+YN+ I+     G+++ 
Sbjct: 243 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 302

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  ++ +M  K I PD  TY+ L +GLC  G V +A KL +++ +  +  D  +YN LI+
Sbjct: 303 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 362

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
                 ++  A ++ + M+ +G  P ++TY  LI G CK G  + A  + + M +    P
Sbjct: 363 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 422

Query: 498 NLVIYNSIINGLCKD----------ASLDAAK 519
           +   Y S+I GL  +          A+ DAAK
Sbjct: 423 DDSTYISLIEGLTTEDERAIDDERLAAADAAK 454



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 191/396 (48%), Gaps = 43/396 (10%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  L HL    +  R  +L ++M       N  T+N VI   C   +++ AL +   M 
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 99

Query: 244 -KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            + GI PN   +  +I+  C+VG ++ A+K+F +M  ++   V P +V +N +I G+C  
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM--LTKGEVKPEAVMYNALIGGYCDQ 157

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G+++ A   R  M++ G+   V TY  L+      G   EA  L +EM  +GL P+   Y
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 363 NSTIHWLFAEGDVEGALFVLSDM-----------------------------------ID 387
           N  I+    EG+V+ AL +  +M                                   + 
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I PD   Y+ L      +G + +AF++  ++ ++ +  D  +YN L+  LC    +  
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A++L+  M  RG+ PD++TY TLI GY   G+++ A+++   M      P L+ YN++I 
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           GLCK+   D A+++++     G+  D  TY +LI G
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 193/398 (48%), Gaps = 26/398 (6%)

Query: 30  STEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSEF--RKSPKLALEFYTWVGE 86
           +T +I+ R +C      R  ++L QM P       N V++ F  R   + AL+    + E
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 100

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------EGLL 136
               + +  +   ++       R D+A+ +   +++   V P   +          +G L
Sbjct: 101 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 160

Query: 137 DSYEICK---------ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           D+  + +          T A ++ LV A    G    AY++++++  KG +  +  +N  
Sbjct: 161 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 220

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           ++   K   + +  ++++ M   G    V T+  +IYAL K+ +++E   L+   ++ GI
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P++V +N +IN     G+++ A   F  MG M    + P+ VT+N ++ G C LGRV+ 
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRA---FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A ++   M K GI  ++ TY TLI GY+  G  ++ALR+ +EM+ +G  P  + YN+ I 
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
            L   G  + A  ++ +M++  I PD  TY  L +GL 
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
           A AFA+F++M  + + +    +NI++  LC  G   +A EL++ M      P+ VTY T+
Sbjct: 23  APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTV 78

Query: 610 VTRFSKNCSPEEVIELHDDMV-LSGVSPDNQTYNAIIS 646
           +  F      +  +++  +M    G++P+  TY  +IS
Sbjct: 79  IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVIS 116


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 225/440 (51%), Gaps = 5/440 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L         +SL+ +   +GI P++   +++IN  C    +  A  +F  + 
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANI- 118

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                   PN++T N +I G C  G ++ A      ++  G   +  +Y TLI+G  + G
Sbjct: 119 --LKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG 176

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            ++   RL  ++    + P+ V+YN+ I+ L     +  A  V S+MI K I PD  TY+
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G C  G +K+AF L N++  +++  +  ++NILI+ L K   +  AK LL+ M+  
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            + PD+ TY +LIDGY     ++ A  V+ +M +    P++  Y ++INGLCK   +D A
Sbjct: 297 CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEA 356

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            SL +  +   ++ D +TYN+LI+G   N  +  A A+   M+  GI  +   Y IL++ 
Sbjct: 357 MSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDG 416

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G  + A+E+ + ++  G   +   YT L+ R  K    +E ++L   M   G  PD
Sbjct: 417 LCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPD 476

Query: 638 NQTYNAIISPLLGEKSAEDQ 657
             T++ II  L  EK   D+
Sbjct: 477 AVTFDIIIRALF-EKDENDK 495



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 231/452 (51%), Gaps = 4/452 (0%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +NN LS LV          L+K+    G   ++ T +++I   C +  +  A S++  +L
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  PN +  N +I   C  G+++ AL  F    V  G  +  + V++  +ING CK G
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKAL-YFHDQLVAQGFQL--DQVSYGTLINGLCKTG 176

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             +    +   +    +  +V  Y T+I+   +     +A  +  EM+ +G+ P+ V Y 
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + IH     G ++ A  +L++M  K+I P+  T++IL   L + G +K+A  L   +++ 
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D ++YN LI+     + +  AK +  SM  RG+ PD+  Y  +I+G CK   ++ A
Sbjct: 297 CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEA 356

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
           + ++E MK     P++V YNS+I+GLCK+  L+ A +L +  +  G+  D  +Y  L++G
Sbjct: 357 MSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDG 416

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              +G++ +A  +F  +   G  +N   Y +LIN LCK G + +A +L   M   G +PD
Sbjct: 417 LCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPD 476

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            VT+  ++    +    ++  ++  +M+  G+
Sbjct: 477 AVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 207/403 (51%), Gaps = 4/403 (0%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + ++  ++  G+  N  T N +I  LC   ++++AL  + +++  G   + V +  +IN 
Sbjct: 112 FSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLING 171

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G+ +   +L RK+    G SV P+ V +N IIN  CK   +  A ++   MI  GI
Sbjct: 172 LCKTGETKAVARLLRKL---EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 228

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY TLI G+   G  +EA  L +EM  + + PN   +N  I  L  EG ++ A  
Sbjct: 229 SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKI 288

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L+ M+   I PD FTY+ L  G      VK A  +   + +  +  D   Y  +IN LC
Sbjct: 289 LLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  L   M  + +IPDI+TY +LIDG CK  ++E A+ + + MK+   +P++ 
Sbjct: 349 KTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVY 408

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  +++GLCK   L+ AK + Q     G  L+   Y  LIN     G   EA  + S+M
Sbjct: 409 SYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKM 468

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
            + G   + V ++I+I  L +     +A ++++ MI  G++ +
Sbjct: 469 EDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 4/401 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+ V   +  +G   +    N  +  L    EI +    + ++V+ G+  +  ++  +I 
Sbjct: 111 AFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLIN 170

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK  + +    L  ++    + P+VV +N IIN  C+   L  A  ++ +M V     
Sbjct: 171 GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIV---KG 227

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P+ VT+  +I+GFC +G ++ A  +   M    I+ NV T+  LID  ++ G  +EA 
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L   M+K  + P+   YNS I   F   +V+ A +V   M  + + PD   Y+ +  GL
Sbjct: 288 ILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGL 347

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   V +A  L  ++  ++M+ D  +YN LI+ LCK+++L  A  L   M  +G+ PD+
Sbjct: 348 CKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDV 407

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            +Y  L+DG CK G +E A ++++ +       N+  Y  +IN LCK    D A  L   
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSK 467

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
            +  G + DA+T++ +I   F   +  +A  +  EM   G+
Sbjct: 468 MEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 193/384 (50%), Gaps = 3/384 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             + L++     G  + A     +L  +G  +   ++   ++ L K  E     +L +++
Sbjct: 129 TLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL 188

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  +V  +N +I +LCK   L +A  +Y  M+  GI P+VV +  +I+  C +G L
Sbjct: 189 EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHL 248

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L  +M +    ++ PN  T N +I+   K G+++ A+ +   M+KA I  +V TY
Sbjct: 249 KEAFSLLNEMKL---KNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTY 305

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LIDGY      + A  +   M +RG+ P+   Y + I+ L     V+ A+ +  +M  
Sbjct: 306 NSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K++ PD  TY+ L  GLC+N  +++A  L  ++ E+ +  D YSY IL++ LCKS  L  
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           AK++   ++ +G   ++  Y  LI+  CK G  + A+ +   M+     P+ V ++ II 
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIR 485

Query: 508 GLCKDASLDAAKSLLQASQRIGLL 531
            L +    D A+ +L+     GLL
Sbjct: 486 ALFEKDENDKAEKILREMIARGLL 509



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 148/299 (49%), Gaps = 3/299 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A DV  ++ VKG S  +  +   +     +  +   + L  EM       NV TFN++I 
Sbjct: 216 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILID 275

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           AL KE K++EA  L   M+K+ I P+V  +N +I+    V +++ A  +F     M+   
Sbjct: 276 ALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYS---MAQRG 332

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V P+   +  +ING CK   V+ A  +   M    +  ++ TY +LIDG  +    E A+
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAI 392

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            LC  M ++G+ P+   Y   +  L   G +E A  +   ++ K    +   Y++L   L
Sbjct: 393 ALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           C+ G   +A  L +++ ++  + DA +++I+I  L + +    A+++L  MI RGL+ +
Sbjct: 453 CKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 226/439 (51%), Gaps = 4/439 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   + ++  L++  L K  +    ++++  +L+S   P+   +   I  A ++ D+   
Sbjct: 512 GIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 571

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+LF +M     D + P    +N +I+G CK+ +++ AE++   M+   +  ++ TY TL
Sbjct: 572 LELFNRM---KHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTL 628

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDGY + G+ E++ ++ + M    + P+ + +N+ +  LF  G VE A  VL++M D+  
Sbjct: 629 IDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGF 688

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD FT+SIL  G   N     A  ++   ++  +  +AY+ +IL+N LCK   +  A++
Sbjct: 689 VPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEE 748

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L   + +GL+P+ + Y T+IDGY + G++ GA    + M+K   KP+ + YN +I   C
Sbjct: 749 ILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFC 808

Query: 511 KDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +   ++ A+  +   +  G+  ++ TYN LI GY    +  + F +  EM + G   N V
Sbjct: 809 ELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVV 868

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  LIN LCK     +A+ + + M   G+ P+   Y  L+         E+     ++M
Sbjct: 869 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEM 928

Query: 630 VLSGVSPDNQTYNAIISPL 648
              G+  +  TYN +I  L
Sbjct: 929 FKKGIELNLVTYNTLIDGL 947



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 232/464 (50%), Gaps = 8/464 (1%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             F+ L++   + G  E A +V+ ++K +G       ++         ++      +Y+  
Sbjct: 659  TFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETA 718

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            V  G   N  T ++++ ALCKE ++E+A  +  R +  G+ PN V +N +I+   + GDL
Sbjct: 719  VDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDL 778

Query: 268  EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
              A     K+  M    + P+ + +NC+I  FC+LG +E AE+    M   G+  +V TY
Sbjct: 779  VGAR---MKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETY 835

Query: 328  ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
              LI GY R    ++   L  EM   G MPN V Y + I+ L     +  A  V  DM D
Sbjct: 836  NILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 895

Query: 388  KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            + + P+   Y++L  G C  G ++ AF+   ++ ++ +  +  +YN LI+ L  +  LA 
Sbjct: 896  RGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAE 955

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            A+ +L  +  +GL PD+ TY +LI GY   GN++  + +YE MK    KP L  Y+ +I+
Sbjct: 956  AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS 1015

Query: 508  GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             LC    ++  K +  + S +  LL    YN +++ Y ++G + +AF +  +M    I +
Sbjct: 1016 -LCTKEGIELTKKIFGEMSLQPDLL---VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGL 1071

Query: 567  NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            +K  YN LI    K G   + R L+  M    + P+  TY  +V
Sbjct: 1072 DKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 238/458 (51%), Gaps = 8/458 (1%)

Query: 192  VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            VKL+++G+  +L+  M        V  +N++I  LCK  ++++A  L+  ML   + P++
Sbjct: 563  VKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSL 622

Query: 252  VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
            + +N +I+  C+ G+ E + K+  +M     D++ P+ +T N ++ G  K G VE AE +
Sbjct: 623  ITYNTLIDGYCKDGNPEKSFKVRERM---KADNIEPSLITFNTLLKGLFKAGMVEDAENV 679

Query: 312  RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
               M   G   +  T++ L DGY+    ++ AL + +  V  GL  N    +  ++ L  
Sbjct: 680  LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739

Query: 372  EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            EG +E A  +L   + K + P+   Y+ +  G  R G +  A    + + ++ M  D  +
Sbjct: 740  EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799

Query: 432  YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
            YN LI   C+  ++  A+Q ++ M ++G+ P + TY  LI GY +    +    + + M+
Sbjct: 800  YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859

Query: 492  KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIA 550
                 PN+V Y ++IN LCK + L  A+ + +  +  G+   +  YN LI+G    GKI 
Sbjct: 860  DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 551  EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            +AF    EM   GI +N V YN LI+ L   G   +A +++  +   G+ PD  TY +L+
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979

Query: 611  T--RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            +  RF+ N   +  I L+++M  SG+ P  +TY+ +IS
Sbjct: 980  SGYRFAGNV--QRCIALYEEMKTSGIKPTLKTYHLLIS 1015



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 245/507 (48%), Gaps = 12/507 (2%)

Query: 143  KATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
            + +P VF  + L+    ++   + A  +  ++  +    S+  +N  +    K     + 
Sbjct: 582  RISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKS 641

Query: 201  WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +K+ + M +     ++ TFN ++  L K   +E+A ++   M   G  P+   F+++ + 
Sbjct: 642  FKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDG 701

Query: 261  ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
                   + AL ++ +  V SG  +  N+ T + ++N  CK G++E AEEI    +  G+
Sbjct: 702  YSSNDKADAALGVY-ETAVDSGLKM--NAYTCSILLNALCKEGQIEKAEEILGREMAKGL 758

Query: 321  DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              N   Y T+IDGY+R G    A    D M K+G+ P+++ YN  I      GD+E A  
Sbjct: 759  VPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQ 818

Query: 381  VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
             ++ M  K + P   TY+IL  G  R     + F L  ++ +   + +  SY  LIN LC
Sbjct: 819  EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLC 878

Query: 441  KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
            K + L  A+ +   M  RG+ P++  Y  LIDG C  G IE A +  E M K   + NLV
Sbjct: 879  KGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLV 938

Query: 501  IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
             YN++I+GL  +  L  A+ +L    R GL  D  TYN+LI+GY   G +    A++ EM
Sbjct: 939  TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEM 998

Query: 560  RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH-GIIPDYVTYTTLVTRFSKNCS 618
            +  GI      Y++LI+      C ++  EL K +     + PD + Y  ++  ++ +  
Sbjct: 999  KTSGIKPTLKTYHLLISL-----CTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGD 1053

Query: 619  PEEVIELHDDMVLSGVSPDNQTYNAII 645
             ++   L   M+   +  D  TYN++I
Sbjct: 1054 MDKAFNLQKQMIEKSIGLDKTTYNSLI 1080



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 207/438 (47%), Gaps = 5/438 (1%)

Query: 221 LVIYALCKECKL-EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           L++  L  E K+  EA  L++ +   GI+P+     ++++   +       + +F  + +
Sbjct: 486 LLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVF--LNI 543

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +  D   P+   +   I    KL  V    E+   M    I   V  Y  LIDG  +   
Sbjct: 544 LESD-FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQ 602

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            ++A +L DEM+ R L+P+ + YN+ I     +G+ E +  V   M   +I P   T++ 
Sbjct: 603 MKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNT 662

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L KGL + G V+ A  +  ++ ++  V DA++++IL +    ++   AA  +  + +  G
Sbjct: 663 LLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSG 722

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L  +  T   L++  CK G IE A ++          PN V+YN++I+G  +   L  A+
Sbjct: 723 LKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGAR 782

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             + A ++ G+  D + YN LI  +   G +  A    ++M+  G++ +   YNILI   
Sbjct: 783 MKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGY 842

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            +   + +  +L+K M  +G +P+ V+Y TL+    K     E   +  DM   GVSP+ 
Sbjct: 843 GRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNV 902

Query: 639 QTYNAIISPLLGEKSAED 656
           + YN +I     +   ED
Sbjct: 903 RIYNMLIDGCCSKGKIED 920



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 188/392 (47%), Gaps = 7/392 (1%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             ++ L+R   ++G  E A   + K+K+KG S S+  +N  +    +  E  + + L KEM
Sbjct: 799  AYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEM 858

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
               G + NV ++  +I  LCK  KL EA  +   M   G+ PNV  +NM+I+  C  G +
Sbjct: 859  EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKI 918

Query: 268  EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
            E A   FR    M    +  N VT+N +I+G    G++  AE++   + + G+  +V TY
Sbjct: 919  EDA---FRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTY 975

Query: 328  ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +LI GY   G+ +  + L +EM   G+ P    Y+  I     EG +E    +  +M  
Sbjct: 976  NSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKKIFGEM-- 1032

Query: 388  KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
              + PD   Y+ +      +G + +AF L  Q++E+ +  D  +YN LI    K   L  
Sbjct: 1033 -SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 1091

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
             + L+  M  R + P+  TY  ++ G+C+  +  GA   Y  M++     ++ I + +++
Sbjct: 1092 VRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVS 1151

Query: 508  GLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
            GL ++     A++++       L D I    L
Sbjct: 1152 GLKEEWRSKEAENVISEMNGRKLGDVIVDEDL 1183



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 5/277 (1%)

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
           F LS    KH     F+Y +L+  L  +  + +A  L   +  E +   + S  +L+++L
Sbjct: 472 FSLSSPSLKH----DFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHL 527

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K+        +  +++     P    YG  I    K  ++   ++++  MK     P +
Sbjct: 528 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTV 587

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSE 558
            IYN +I+GLCK   +  A+ L        LL + ITYNTLI+GY  +G   ++F +   
Sbjct: 588 FIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRER 647

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M+   I  + + +N L+  L K G  + A  ++  M   G +PD  T++ L   +S N  
Sbjct: 648 MKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDK 707

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +  + +++  V SG+  +  T + +++ L  E   E
Sbjct: 708 ADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIE 744


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 276/576 (47%), Gaps = 28/576 (4%)

Query: 55  APSLTNSLVN----RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           +PSL   L++    RV+S+    P   L F+ ++      S  L +   +++ L   R+F
Sbjct: 23  SPSLQFDLISHVTYRVLSDPTLPPLSCLTFFHFLP-----SPDLNARLILLYRLFAARKF 77

Query: 111 DDALLLMGNLMSAN--SVSPLEFLEGLLDSYEICKATP----AVFDALVRACTQIGATEG 164
                L+ +L++    +  P+  +  L+D    C+  P     + D L R C        
Sbjct: 78  AAMRTLLDSLVTTEVETKRPVSDVVSLVDE---CEFEPHFVETLCDMLFRVCADNRMFRD 134

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVI 223
           A  V   +  KG  + +   + F     K N++    + ++ MV  G V+  V +  +V+
Sbjct: 135 ALKVFDYVMEKG--LVVEGRSCFXK---KCNKVELCVRFFRRMVESGRVDIGVQSLTIVV 189

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
             LC+  ++  A  L   M   G+ P V  +N ++N      D E   ++   +G+M  +
Sbjct: 190 DVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEI---LGLMERE 246

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V+ + VT+  +I  +    R+  AE++   M +  ++ +V  Y ++I    R G+   A
Sbjct: 247 GVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRA 306

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             L DEM+ RG++PN   + + I  +   G +E A  +L +M  K +  +   ++ +  G
Sbjct: 307 SALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDG 366

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            C+ G + +AF+L + +  +    D ++YNIL + LCK +    AK++L+ M+ +G+ P+
Sbjct: 367 YCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPN 426

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++T  T I+ YC+ GN+    +   N++K    PN+V YN++I+   K+  +  A  L  
Sbjct: 427 VVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKA 486

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                GLL D  TY +LI+G  I  K+ EA  +F+EM   GI  N   Y  +I+ L K G
Sbjct: 487 EMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEG 546

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
              +A +L   M+  G+IPD   +  LV    K  S
Sbjct: 547 RADEALKLYDEMMRMGLIPDDRVFEALVGSLHKPSS 582



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 183/393 (46%), Gaps = 37/393 (9%)

Query: 301 KLGRVEFAEEIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           K  +VE        M+++G +D  V++   ++D   R G    A  L +EM  RG++P  
Sbjct: 158 KCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTV 217

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
             YN+ ++      D EG   +L  M  + +     TY+IL +    +  + +A K++ +
Sbjct: 218 FTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEE 277

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E ++  D Y Y  +I++ C++ N+  A  L   MI RG++P+  T+G LI G CK G 
Sbjct: 278 MCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQ 337

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           +E A  + E M+      N+VI+N++++G CK   +D A  L    +R G   D  TYN 
Sbjct: 338 MEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNI 397

Query: 539 LING-----------------------------------YFINGKIAEAFAMFSEMRNVG 563
           L +G                                   Y   G +AE       +   G
Sbjct: 398 LASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  N V YN LI+   K    +QA  L   M+  G++PD  TYT+L+         +E +
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEAL 517

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +L ++M++ G+  + +TY AIIS L  E  A++
Sbjct: 518 KLFNEMLVKGIRGNVKTYTAIISGLSKEGRADE 550



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 210/446 (47%), Gaps = 20/446 (4%)

Query: 75  KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEG 134
           +L + F+  + E+ R    ++S   +V +L        A  LM N M+A  V P  F   
Sbjct: 163 ELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELM-NEMAARGVVPTVF--- 218

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
                         ++ L+ AC      EG  +++  ++ +G   S+  +   +      
Sbjct: 219 -------------TYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASS 265

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
             IG   K+Y+EM       +V  +  +I   C+   +  A +L+  M+  GI PN   F
Sbjct: 266 ERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTF 325

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
             +I+  C+ G +E A  L  +M     D    N V  N +++G+CK G ++ A  ++  
Sbjct: 326 GALISGVCKAGQMEAAEILLEEMQCKGVDL---NVVIFNTMMDGYCKRGMMDEAFRLQDI 382

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G + +V TY  L  G  +    EEA R+ + MV++G+ PN V   + I     EG+
Sbjct: 383 MERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGN 442

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +      L ++  + + P+  TY+ L     +N  VKQA  L  +++E+ ++ D ++Y  
Sbjct: 443 LAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTS 502

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  C  + +  A +L + M+V+G+  ++ TY  +I G  K G  + A+++Y+ M ++ 
Sbjct: 503 LIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMG 562

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKS 520
             P+  ++ +++  L K +S  A K 
Sbjct: 563 LIPDDRVFEALVGSLHKPSSHAALKQ 588


>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
 gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
          Length = 829

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 273/552 (49%), Gaps = 44/552 (7%)

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           L + +  C +   V+DAL  +  +      A  V+ K+      +S+  +++ L H +++
Sbjct: 158 LWNRFRECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLL-HGLRM 216

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVC 253
            ++    +L++EM SCG   +  + +++I  LCK+ K+ EALS      K G + P  + 
Sbjct: 217 TDVA--LELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMT 274

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           FN++++  C  G ++ A K F  + +M    ++P+  T + +I+G CK+G +E A ++  
Sbjct: 275 FNILMSALCNWGFVQSA-KSF--LCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFE 331

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            + K G++  + TY +LI+GY   G ++E  ++   M  +G+ P+ V Y   I      G
Sbjct: 332 RVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESG 391

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           DVE  + V  D++D+ +  +  TYS+L   L + G   +   L  ++    +  D  +Y+
Sbjct: 392 DVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYS 451

Query: 434 ILINYLCKSNNLAAAKQLLSSM-----------------------------------IVR 458
           ILI+  CK   +  A Q+ ++M                                   + R
Sbjct: 452 ILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVAR 511

Query: 459 GLIP-DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
              P D++ Y  +IDGY K G+I  AV++Y+ +      P +V  NS++ G CK   L  
Sbjct: 512 KYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQL 571

Query: 518 AKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+S  +A Q  GLL  A+TY TL++     G++    ++F EM    I  N V Y++++ 
Sbjct: 572 AESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVK 631

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            LCK   + +A  ++K M   GI  D +TY TL+  F ++ + +    +HD M+  G+ P
Sbjct: 632 GLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVP 691

Query: 637 DNQTYNAIISPL 648
              TYN +I+ L
Sbjct: 692 TPVTYNLLINVL 703



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 225/511 (44%), Gaps = 52/511 (10%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+    ++G+ E A D+ +++  +G  + I  +N+ ++    L       K+ + M 
Sbjct: 310 FSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMR 369

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA------C 262
             G   ++ T+ ++I   C+   +EE + +   +L  G+  N+V +++++N        C
Sbjct: 370 GQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFC 429

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG--- 319
           ++ +L         +G +    +  + + ++ +I+G+CKLG +E A ++  AM  +    
Sbjct: 430 EIDNL---------LGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVM 480

Query: 320 ---------------------------------IDCNVRTYATLIDGYARGGSSEEALRL 346
                                               +V  Y  +IDGYA+ G    A+RL
Sbjct: 481 PTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRL 540

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D++   G+ P  V  NS ++     GD++ A      +    + P   TY+ L   L  
Sbjct: 541 YDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSE 600

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V     L ++++ + +  +A +Y++++  LCK      A  +L  M  +G+  D IT
Sbjct: 601 AGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINADPIT 660

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLI G+C+  N++ A  +++ M      P  V YN +IN LC    +  A+ LL++ +
Sbjct: 661 YNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLESLR 720

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+ L    Y TLI      G    A  +  ++ + G   +   ++  IN LCK    +
Sbjct: 721 ENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQFAK 780

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           +A   + +M+  GI PD   Y  L     KN
Sbjct: 781 EAFMFVPIMLSVGIYPDTQIYCVLGRALQKN 811



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 3/301 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V  +N+VI    K   +  A+ LY ++  +G+ P +V  N ++   C++GDL+ A   F
Sbjct: 517 DVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYF 576

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R +  +SG  +LP +VT+  +++   + G V     +   M+   I  N  TY+ ++ G 
Sbjct: 577 RAIQ-LSG--LLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGL 633

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            +    +EA+ +  +M  +G+  + + YN+ I       +V+ A  +   M+ + + P  
Sbjct: 634 CKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTP 693

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY++L   LC  G V QA  L   + E  +    ++Y  LI   C       A  L+  
Sbjct: 694 VTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGK 753

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           ++  G    I  +   I+  CK    + A      M  V   P+  IY  +   L K++ 
Sbjct: 754 LLDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQKNSE 813

Query: 515 L 515
           L
Sbjct: 814 L 814


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 220/448 (49%), Gaps = 4/448 (0%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           KL +     G V N   +N++I   C+   +   + L   M   G+ P VV +  +++  
Sbjct: 280 KLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWL 339

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + GDLE   K+   +  M    + PN   +N +I+  CK      A  +   M   G D
Sbjct: 340 GRKGDLE---KIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCD 396

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T++TLI G  + G  +EA RL  E  +  L PN   Y S IH     G+V  A  +
Sbjct: 397 PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M+++   PD  T+  L  GL   G V +A  +  ++    ++ DA  YN+LI+ LCK
Sbjct: 457 LVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCK 516

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L AA+ L+  M+ + + PD   Y TLIDG+ +  +++ A +++E M++    P++V 
Sbjct: 517 KKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVG 576

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN++I G C+   ++ A   +   +++G + D  TY TLI GY   G I+ A ++  +M 
Sbjct: 577 YNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM 636

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
                 N V Y+ LIN  CK G    A  L   M   G+ P+ +TYT L+    K     
Sbjct: 637 KRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVV 696

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
                 + M+L+  SP++ T +++++ L
Sbjct: 697 RAAMYFEYMLLNQCSPNDYTLHSLVTGL 724



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/416 (33%), Positives = 203/416 (48%), Gaps = 8/416 (1%)

Query: 233 EEALSLYYRML--KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++A  LY  ML  +SG      C  +++   C  G +E  LKL        G   +PN+V
Sbjct: 241 DDARKLYDEMLAEESGADDYSTC--VMVRGLCLEGLVEKGLKLIE---ARWGAGCVPNAV 295

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +N +I+G+C+ G V     +   M   G+   V TY TL+    R G  E+   L  EM
Sbjct: 296 FYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEM 355

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            +R L PN  +YNS I  L        AL VL  M      PD  T+S L  GLC+ G V
Sbjct: 356 RERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRV 415

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           ++A +L  +     +  +  SY  LI+  C    +  A  LL  M+ RG  PD++T+G L
Sbjct: 416 QEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGAL 475

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I G    G +  A+ V E M   +  P+  IYN +I+GLCK   L AA++L++      +
Sbjct: 476 IHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNV 535

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D   Y TLI+G+  N  + EA  +F  M   GI  + VGYN +I   C+FG   +A E
Sbjct: 536 HPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVE 595

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            M  M   G IPD  TYTTL+  ++K  +    + L  DM+     P+   Y+++I
Sbjct: 596 CMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLI 651



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 234/497 (47%), Gaps = 25/497 (5%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           ++ +++ KG   ++  +   +S L +  ++ +   L  EM       NV  +N VI ALC
Sbjct: 316 LLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALC 375

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K     +AL +  +M   G  P+ + F+ +I+  CQ G ++ A +L R+    +   + P
Sbjct: 376 KCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRET---TRWELNP 432

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  ++  +I+GFC  G V  A  +   M++ G   +V T+  LI G    G   EAL + 
Sbjct: 433 NLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVR 492

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           ++M  R L+P+  +YN  I  L  +  +  A  ++ +M+++++ PD + Y+ L  G  RN
Sbjct: 493 EKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRN 552

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             + +A K+   + ++ +  D   YN +I   C+   +  A + +S+M   G IPD  TY
Sbjct: 553 ESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTY 612

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLI GY K GNI GA+ +  +M K   +PN+V Y+S+ING CK    DAA+ L  + + 
Sbjct: 613 TTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMES 672

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  + ITY  LI   F   K+  A   F  M     + N    + L+  LC       
Sbjct: 673 QGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASII 732

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE------------------EVIELHDD 628
           +      + LHG       +  LV   +  C P                   E ++L + 
Sbjct: 733 SSHCSSTVNLHGKGALLDIFRALV---NDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNK 789

Query: 629 MVLSGVSPDNQTYNAII 645
           M   G  PD+ T+ +++
Sbjct: 790 MANKGYKPDSATFLSLL 806



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 165/366 (45%), Gaps = 5/366 (1%)

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA---TLIDGYARGGSSEEALRLCD 348
           H+ ++    + GR +  +     M  AG    V T A    L+  YA  G   +A  +C 
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 349 EMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
              +  G +P     N  +  L      + A  +  +M+ +    D ++  ++ +GLC  
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V++  KL         V +A  YN+LI+  C+  ++     LL  M  +GL+P ++TY
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
           GTL+    + G++E    +   M++    PN+ IYNS+I+ LCK  S   A  +L+    
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G   DAIT++TLI+G    G++ EA  +  E     +  N   Y  LI+  C  G    
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  L+  M+  G  PD VT+  L+          E + + + M    + PD   YN +IS
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512

Query: 647 PLLGEK 652
            L  +K
Sbjct: 513 GLCKKK 518



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 23/410 (5%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A +++ ++  +GH+  +  +   +  LV   ++     + ++M +   + + N +N++I 
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK+  L  A +L   ML+  + P+   +  +I+   +   L+ A K+F     M    
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFE---FMEQKG 569

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P+ V +N +I G+C+ G +  A E    M K G   +  TY TLI GYA+ G+   AL
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  +M+KR   PN V Y+S I+     GD + A  +   M  + + P+  TY+IL   L
Sbjct: 630 SLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSL 689

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN------------NLAAAKQLL 452
            +   V +A      +L      + Y+ + L+  LC S             NL     LL
Sbjct: 690 FKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALL 749

Query: 453 SSMIVRGLI-----PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              I R L+     P    Y  +I   C    +  A+ +   M     KP+   + S++ 
Sbjct: 750 D--IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLY 807

Query: 508 GLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
           G C        +++L    QR  L  A  Y  L + Y +     E +++F
Sbjct: 808 GFCSVGKSREWRTILPNEFQRDELEVASRYKILFDQYVVKSVGCEVYSVF 857



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%)

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           + A ++Y+ M   E   +      ++ GLC +  ++    L++A    G + +A+ YN L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+GY   G +     +  EM   G+    V Y  L+++L + G  ++   L+  M    +
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            P+   Y +++    K  S  + + +   M   G  PD  T++ +IS L  E   ++
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQE 417


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 225/422 (53%), Gaps = 4/422 (0%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ KL +A++L+  M+K+  +P++V FN +++   ++   +  + L +KM V+    +  
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG---IRN 118

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T N +IN FC   +V  A  +   M+K G + +  T  +L++G+ R     +A+ L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D+MV+ G  P+ V YN+ I  L     V  AL    ++  K I P+  TY+ L  GLC +
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G    A +L   +++  +  +  +Y+ L++   K+  +  AK++   M+   + PDI+TY
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTY 298

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQ 526
            +LI+G C    I+ A Q+++ M      P++V YN++ING CK   + D  K   + SQ
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R  + + +TYNTLI G+F  G + +A   FS+M + G++ +   YNIL+  LC  G  ++
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEK 418

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  + + M    +  D VTYTT++    K    E+   L   + L G+ PD  TY  ++S
Sbjct: 419 ALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMS 478

Query: 647 PL 648
            L
Sbjct: 479 GL 480



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 220/437 (50%), Gaps = 4/437 (0%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++EMV      ++  FN ++ A+ K  K +  +SL  +M   GI  ++  FN++IN  C
Sbjct: 72  LFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
               +  AL +  KM  +  +   P+ VT   ++NGFC+  RV  A  +   M++ G   
Sbjct: 132 CCFQVSLALSVLGKMLKLGYE---PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++  Y  +ID   +     +AL    E+ ++G+ PN V Y + ++ L   G    A  +L
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DMI + I P+  TYS L     +NG V +A ++  +++   +  D  +Y+ LIN LC  
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
           + +  A Q+   M+ +G  PD+++Y TLI+G+CK   +E  ++++  M +     N V Y
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N++I G  +   +D A+         G+  D  TYN L+ G   NG + +A  +F +M+ 
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             + ++ V Y  +I  +CK G  + A  L   + L G+ PD VTYTT+++         E
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488

Query: 622 VIELHDDMVLSGVSPDN 638
           V  L+  M   G+  ++
Sbjct: 489 VEALYTKMKQEGLMKND 505



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 213/424 (50%), Gaps = 4/424 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS +VK+ +      L K+M   G   ++ TFN+VI   C   ++  ALS+ 
Sbjct: 84  SIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVL 143

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +MLK G  P+ V    ++N  C+   +  A+ L  KM  +      P+ V +N II+  
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI---GYRPDIVAYNAIIDSL 200

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK  RV  A +    + + GI  NV TY  L++G    G   +A RL  +M+KR + PN 
Sbjct: 201 CKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNV 260

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y++ +      G V  A  +  +M+   I PD  TYS L  GLC +  + +A ++ + 
Sbjct: 261 ITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +    D  SYN LIN  CK+  +    +L   M  RGL+ + +TY TLI G+ + G+
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGD 380

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A + +  M      P++  YN ++ GLC +  L+ A  + +  Q+  + LD +TY T
Sbjct: 381 VDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTT 440

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G    GK+ +A+ +F  +   G+  + V Y  +++ LC  G   +   L   M   G
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEG 500

Query: 599 IIPD 602
           ++ +
Sbjct: 501 LMKN 504



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 224/442 (50%), Gaps = 16/442 (3%)

Query: 166 YDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
           YDV+    +K++V G    ++ +N  ++      ++     +  +M+  GY  +  T   
Sbjct: 101 YDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGS 160

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           ++   C+  ++ +A+SL  +M++ G  P++V +N II+  C+   +  AL  F+++G   
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIG--- 217

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              + PN VT+  ++NG C  GR   A  +   MIK  I  NV TY+ L+D + + G   
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVL 277

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA  + +EMV+  + P+ V Y+S I+ L     ++ A  +   M+ K   PD  +Y+ L 
Sbjct: 278 EAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLI 337

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G C+   V+   KL  ++ +  +V +  +YN LI    +  ++  A++  S M   G+ 
Sbjct: 338 NGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVS 397

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PDI TY  L+ G C  G +E A+ ++E+M+K E   ++V Y ++I G+CK   ++ A  L
Sbjct: 398 PDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGL 457

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC- 579
             +    GL  D +TY T+++G    G   E  A++++M+  G+  N        + LC 
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND-------SMLCL 510

Query: 580 KFGCYQQARELMKVMILHGIIP 601
             G    + EL+K M+  G  P
Sbjct: 511 GDGDITISAELIKKMLSCGYAP 532



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 171/328 (52%), Gaps = 3/328 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  ++ K+   G+   I A+N  +  L K   +      +KE+   G   NV T+  ++ 
Sbjct: 174 AVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN 233

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   +  +A  L   M+K  I PNV+ ++ +++   + G +  A ++F +M  MS D 
Sbjct: 234 GLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSID- 292

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P+ VT++ +ING C   R++ A ++   M+  G   +V +Y TLI+G+ +    E+ +
Sbjct: 293 --PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L  +M +RGL+ N V YN+ I   F  GDV+ A    S M    + PD +TY+IL  GL
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C NG +++A  +   + +  M  D  +Y  +I  +CK+  +  A  L  S+ ++GL PDI
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDI 470

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           +TY T++ G C  G       +Y  MK+
Sbjct: 471 VTYTTMMSGLCTKGLQHEVEALYTKMKQ 498



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 160/319 (50%), Gaps = 11/319 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + ALV      G    A  +++ +  +  + ++  ++  L   VK  ++    ++++EM
Sbjct: 227 TYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V      ++ T++ +I  LC   +++EA  ++  M+  G +P+VV +N +IN  C+   +
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRV 346

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E  +KLFRK   MS   ++ N+VT+N +I GF ++G V+ A+E    M   G+  ++ TY
Sbjct: 347 EDGMKLFRK---MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTY 403

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+ G    G  E+AL + ++M K  +  + V Y + I  +   G VE A  +   +  
Sbjct: 404 NILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSL 463

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN-NLA 446
           K + PD  TY+ +  GLC  G   +   L+ ++ +E ++ +        + LC  + ++ 
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND-------SMLCLGDGDIT 516

Query: 447 AAKQLLSSMIVRGLIPDII 465
            + +L+  M+  G  P ++
Sbjct: 517 ISAELIKKMLSCGYAPSLL 535



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 120/250 (48%), Gaps = 1/250 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L+K   R+  +  A  L  ++++         +N L++ + K         L   M V G
Sbjct: 56  LSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG 115

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  D+ T+  +I+ +C    +  A+ V   M K+  +P+ V   S++NG C+   +  A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           SL+     IG   D + YN +I+      ++ +A   F E+   GI  N V Y  L+N L
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C  G +  A  L++ MI   I P+ +TY+ L+  F KN    E  E+ ++MV   + PD 
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295

Query: 639 QTYNAIISPL 648
            TY+++I+ L
Sbjct: 296 VTYSSLINGL 305


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 223/428 (52%), Gaps = 5/428 (1%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           KL+EA+++   M   G+  +    N +++ A  +G +E A  +F +M       V P+ V
Sbjct: 169 KLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEM---CQRGVSPDCV 225

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           +   ++   C +GRV  AE+   AM++ G   +  T   +ID + + G     +    +M
Sbjct: 226 SFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKM 285

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V+ GL PN + + + I+ L  +G ++ A  +L +M+ +   P+ +T++ L  GLC+ G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 411 KQAFKLHNQ-VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++AF+L  + V  +    + ++Y  +IN  CK + L  A+ LLS M  +GL+P+  TY T
Sbjct: 346 EKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+CK GN   A ++ + M K    PN+  YN+II+GLCK  SLD A  LL      G
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D +TY  L++ +        +   F++M  VG   +   Y  LI+  C+    +++ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L +  +  G+IP   TYT+++  + +  +    ++L   M   G +PD+ TY A+IS L
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 649 LGEKSAED 656
             E   +D
Sbjct: 586 CKESKLDD 593



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 236/485 (48%), Gaps = 7/485 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V   +V    + G  + A +++ +++ +G   S    N  L   V +  +     ++ EM
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-IWPNVVCFNMIINEACQVGD 266
              G   +  +F L++ A C   ++ EA      M++ G I  N  C  +II+  CQ G 
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATC-TLIIDAFCQKGY 274

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +   +  F KM  M    + PN +    +ING CK G ++ A E+   M++ G   NV T
Sbjct: 275 VNRVVGYFWKMVEMG---LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYT 331

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           + TLIDG  + G +E+A RL  ++V+  G  PN   Y + I+    E  +  A  +LS M
Sbjct: 332 HTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRM 391

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            ++ + P+  TY+ L  G C+ G   +A++L + + +E    + Y+YN +I+ LCK  +L
Sbjct: 392 QEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSL 451

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A +LL+ + V GL  D +TY  L+  +C+  +   ++  +  M KV   P++  Y ++
Sbjct: 452 DEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTL 511

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+  C+   +  ++ L + +  +GL+    TY ++I GY   G  + A  +F  M N G 
Sbjct: 512 ISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGC 571

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           A + + Y  LI+ LCK      AR L   M+  G+ P  VT  TL   + K       I 
Sbjct: 572 APDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAIN 631

Query: 625 LHDDM 629
           + D +
Sbjct: 632 VLDRL 636



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 204/425 (48%), Gaps = 44/425 (10%)

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           +G FWK    MV  G   NV  F  +I  LCK+  +++A  L   M++ G  PNV     
Sbjct: 279 VGYFWK----MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I+  C+ G  E A +LF K+  +  D   PN  T+  +ING+CK  ++  AE +   M 
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKL--VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQ 392

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
           + G+  N  TY TLIDG+ + G+   A  L D M K G  PN   YN+ I  L  +G ++
Sbjct: 393 EQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLD 452

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +L+ +    +  D  TY+IL    CR     ++    N++L+     D +SY  LI
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           +  C+   +  +++L    +  GLIP   TY ++I GYC+ GN   AV++++ M      
Sbjct: 513 SXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCA 572

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQA--------------------------SQRIGL 530
           P+ + Y ++I+GLCK++ LD A++L  A                          S  I +
Sbjct: 573 PDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV 632

Query: 531 LDAI-------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
           LD +       T NTL+      GK+  A   F ++ +    VN+V    L+ F+ K  C
Sbjct: 633 LDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRV---TLLGFMNK--C 687

Query: 584 YQQAR 588
           Y+  +
Sbjct: 688 YESNK 692



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 184/366 (50%), Gaps = 2/366 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
            C++  F + G+++ A  +   M   G+  + +T   ++D     G  E A  +  EM +
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG+ P+ V +   +      G V  A   L+ M+++    D+ T +++    C+ G V +
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
                 +++E  +  +  ++  LIN LCK  ++  A +LL  M+ RG  P++ T+ TLID
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337

Query: 473 GYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           G CK G  E A +++  + + +  KPN+  Y ++ING CK+  L+ A+ LL   Q  GL+
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            +  TY TLI+G+   G    A+ +   M   G + N   YN +I+ LCK G   +A  L
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  + +HG+  D VTYT L++   +       +   + M+  G +PD  +Y  +IS    
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCR 517

Query: 651 EKSAED 656
           +K  ++
Sbjct: 518 QKQMKE 523


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 246/503 (48%), Gaps = 5/503 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   ++ ++  C + G  + A D+I +++ KG    +  +N  +  L K N   + + L 
Sbjct: 9   TIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLL 68

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           K+M       N  T+N +I  L KE K+  A  ++  ML   + PN V +N++I+  C  
Sbjct: 69  KKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDC 128

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+ E AL+L   + VM    + P+ V +  +++G  KL + + A+ +   +  +G+    
Sbjct: 129 GNFEQALRL---LDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGY 185

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R Y  +IDG  + G  +E+L+L D M K G  P+ + ++  I+     G ++ A  V+  
Sbjct: 186 RAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICK 245

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M    + P++  Y+ L    C+ G + +AF+ +  +       D +  N+LI+ LC++  
Sbjct: 246 MFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGR 305

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +A A+  +  M    L P+ IT+  +I+GY   G+   A  +++ M K+   P+   Y S
Sbjct: 306 VAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGS 365

Query: 505 IINGLCKDASLDAAKSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           ++ GLCK  +L  AK LL     I   +D   YNT+++     GK+++A A+F EM    
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFN 425

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII-PDYVTYTTLVTRFSKNCSPEEV 622
           +  +   Y I++  L + G    A    +  +  G + P+ V YT+L     K       
Sbjct: 426 VLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAA 485

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
             ++++M   G++PD    NA++
Sbjct: 486 SYIYEEMEHKGINPDTIAINAVL 508



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 224/445 (50%), Gaps = 8/445 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   GYV  + T+N ++   CK+ + + A  L  RM   GI  +V  +NM+I++ C+   
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
                 L +K   M    + PN  T+N +ING  K  ++  A  +   M+   +  N  T
Sbjct: 61  SAKGYLLLKK---MRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVT 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LIDG+   G+ E+ALRL D M  +GL P+ V Y + +  L      + A  ++  + 
Sbjct: 118 YNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIR 177

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +   +  Y+ +  GLC++G + ++ +L + + ++    D  ++++LIN  CK+  + 
Sbjct: 178 MSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIK 237

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK+++  M   GL P+ + Y TLI   CK G+I  A + Y  M +     +  I N +I
Sbjct: 238 NAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLI 297

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           + LC+   +  A+  ++    I L  ++IT++ +INGY I G   +AF+MF EM  +G  
Sbjct: 298 SSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHC 357

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP--DYVTYTTLVTRFSKNCSPEEVI 623
            +   Y  L+  LCK G  ++A++L+    LH I    D   Y T+++   K     + +
Sbjct: 358 PSHFTYGSLLKGLCKGGNLREAKKLL--YKLHHIPAAVDTNIYNTILSETCKRGKLSDAV 415

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            L  +MV   V PD+ TY  I++ L
Sbjct: 416 ALFGEMVQFNVLPDSHTYAIILAGL 440



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 144/591 (24%), Positives = 250/591 (42%), Gaps = 110/591 (18%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            Y +++K++ +  + +   +N  ++ L+K  +IG   +++ EM+      N  T+N++I 
Sbjct: 64  GYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILID 123

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVV-------------------------------- 252
             C     E+AL L   M   G+ P+ V                                
Sbjct: 124 GHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVV 183

Query: 253 ---CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
               +  +I+  C+ G L+ +L+L   + +M  D   P+ +T + +INGFCK G+++ A+
Sbjct: 184 GYRAYTAMIDGLCKHGLLDESLQL---LDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--------------- 354
           E+   M KAG+  N   YATLI    + G   EA R    M + G               
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 355 --------------------LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                               L PN++ ++  I+     GD   A  +  +MI    CP H
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           FTY  L KGLC+ G +++A KL  ++       D   YN +++  CK   L+ A  L   
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGE 420

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN-MKKVEKKPNLVIYNSIINGLCKDA 513
           M+   ++PD  TY  ++ G  + G +  A+  +E  + +    PN V+Y S+ +GL K  
Sbjct: 421 MVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVG 480

Query: 514 SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
             +AA  + +  +  G+  D I  N +++GY   GK+ +   +F +M++  +  +   YN
Sbjct: 481 QSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYN 540

Query: 573 ILIN-----------------------------------FLCKFGCYQQARELMKVMILH 597
           IL++                                    LCK G      +++K MI+ 
Sbjct: 541 ILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIME 600

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             + D +T   L+T   +     +  +L +   L G+ PD  TYNAI + L
Sbjct: 601 DTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGL 651



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 225/502 (44%), Gaps = 3/502 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            FD ++     +G    A+ +  ++   GH  S   + + L  L K   +    KL  ++
Sbjct: 327 TFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKL 386

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  + N +N ++   CK  KL +A++L+  M++  + P+   + +I+    + G +
Sbjct: 387 HHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKM 446

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL  F K   ++  ++ PN V +  + +G  K+G+   A  I   M   GI+ +    
Sbjct: 447 VPALLFFEK--ALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAI 504

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             ++DGY+R G  E+  +L  +M    L P+   YN  +H    + D+       + M  
Sbjct: 505 NAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTR 564

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             I PD  T   +  GLC++G +   FK+  +++ E  + D  + N+LI   C+++ +  
Sbjct: 565 MGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGK 624

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  LL+   + G+IPD+ TY  +  G  +   +  +  +  +M +    P    Y S+IN
Sbjct: 625 AFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLIN 684

Query: 508 GLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G+C+   +  A  L    + IG+    +  + ++ G    GK+ EA  +   M    +  
Sbjct: 685 GMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIP 744

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               +  L++ LCK     +A +L   M L+G+  D V Y  L++    +        L+
Sbjct: 745 TVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLY 804

Query: 627 DDMVLSGVSPDNQTYNAIISPL 648
           ++M   G+ P+  TY  +I  +
Sbjct: 805 EEMKERGLWPNTTTYCTLIDAI 826



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 9/251 (3%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  +  + +++K+ ++   V     N  +++  + +++G+ + L       G + +VNT+
Sbjct: 585 GMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTY 644

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM-- 277
           N +   L +   L E+  L + ML+ GI P    +  +IN  C++GD++ A +L  +M  
Sbjct: 645 NAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEA 704

Query: 278 -GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
            GV S D      V  + ++ G  + G+VE A  +   M++  +   V T+ TL+    +
Sbjct: 705 IGVSSWD------VAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCK 758

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
                EAL+L  +M   G+  + V YN  I  L A+GD   A  +  +M ++ + P+  T
Sbjct: 759 KAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTT 818

Query: 397 YSILTKGLCRN 407
           Y  L   +  N
Sbjct: 819 YCTLIDAISTN 829



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%)

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G     V YN ++N+ CK G Y+ A +L+  M   GI  D  TY  L+    KN  
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
             +   L   M    ++P+  TYN +I+ L+ E+
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKER 94


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 229/436 (52%), Gaps = 4/436 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  MV+   + ++  F  +  AL +    +  +SL  +M  +GI  +V+   ++IN  C+
Sbjct: 79  FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +  +++    F  +G +    + PN +T + +INGFC  G++  A E+   M+  G   N
Sbjct: 139 LCHVDYG---FSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPN 195

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y+ +I G  R G + E ++L + M   G  P+ V+YN+ +  L  +  V  A+ +  
Sbjct: 196 VHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFC 255

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M    I P   TY+ L  GL   G  K+AF L N++   +++ D  ++++LI+ +CK  
Sbjct: 256 KMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEG 315

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            ++ A+ +L +M   G+ PD+ TY TL++GYC    +  A +V+E M    + P++  ++
Sbjct: 316 EVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFS 375

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            ++NG CK   +D AK L       GL+ D ++YNTLI+G     +  EA  +F +M + 
Sbjct: 376 ILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSN 435

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   N V Y+IL++ L K G   QA  L + M   G+ PD VTY  ++    K    ++ 
Sbjct: 436 GYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDA 495

Query: 623 IELHDDMVLSGVSPDN 638
            EL  ++ + G+ P+N
Sbjct: 496 RELFAELSVKGLQPNN 511



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 219/424 (51%), Gaps = 4/424 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +    S LV++        L K+M   G   +V +  ++I   C+ C ++   S+ 
Sbjct: 90  SIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVL 149

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +++K G+ PNV+ F+ +IN  C  G +  A++LF    VM      PN  +++ II G 
Sbjct: 150 GKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELF---DVMVARGYKPNVHSYSIIIKGL 206

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C++G+     ++   M   G + +V  Y T++D   +     EA+ +  +M   G++P  
Sbjct: 207 CRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTV 266

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V Y S IH L   G  + A  +L++M   +I PD   +S+L   +C+ G V +A  +   
Sbjct: 267 VTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKT 326

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + E  +  D  +YN L+N  C    +  A+++   MI +G +PD+ ++  L++GYCK   
Sbjct: 327 MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKR 386

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           I+ A Q+++ M      P+ V YN++I+GLC+      A+ L +     G   + +TY+ 
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           L++     G + +A  +F  M N G+  + V YNI+I+ +CK+G ++ AREL   + + G
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506

Query: 599 IIPD 602
           + P+
Sbjct: 507 LQPN 510



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 209/431 (48%), Gaps = 39/431 (9%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            + V+ K+   G   ++  ++  ++      +IGR  +L+  MV+ GY  NV++++++I 
Sbjct: 145 GFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIK 204

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC+  K  E + L   M   G  P+VV +N I++  C+   +  A+ +F K   M G  
Sbjct: 205 GLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCK---MKGTG 261

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +LP  VT+  +I+G   LGR                                    +EA 
Sbjct: 262 ILPTVVTYTSLIHGLRNLGR-----------------------------------WKEAF 286

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L +EM    +MP+ V ++  I  +  EG+V  A  +L  M +  + PD  TY+ L  G 
Sbjct: 287 GLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGY 346

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C    V +A K+   ++ +  + D +S++IL+N  CK+  +  AKQL   M  RGLIPD 
Sbjct: 347 CLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDT 406

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           ++Y TLI G C+      A +++++M      PNLV Y+ +++ L K   LD A  L +A
Sbjct: 407 VSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRA 466

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +  GL  D +TYN +I+G    GK  +A  +F+E+   G+  N       I+ +CK G 
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526

Query: 584 YQQARELMKVM 594
             +A +  + M
Sbjct: 527 LDEAHKAFRQM 537



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 209/415 (50%), Gaps = 4/415 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + +ALS +  M+ +   P++V F  + +   ++   +  + L ++M  M+G S   + ++
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQME-MAGIS--HDVLS 128

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              +IN FC+L  V++   +   +IK G++ NV T++TLI+G+   G    A+ L D MV
Sbjct: 129 LTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMV 188

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            RG  PN   Y+  I  L   G     + +L  M      PD   Y+ +   LC++  V 
Sbjct: 189 ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  +  ++    ++    +Y  LI+ L        A  LL+ M    ++PD++ +  LI
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D  CK G +  A  + + M ++  +P++  YN+++NG C    +  A+ + +     G +
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM 368

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  +++ L+NGY    +I EA  +F EM + G+  + V YN LI+ LC+     +A EL
Sbjct: 369 PDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEEL 428

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            K M  +G  P+ VTY+ L+   SK    ++ + L   M  SG+ PD  TYN +I
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMI 483



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 187/375 (49%), Gaps = 11/375 (2%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M   + LP+ V    + +   ++   +    +   M  AGI  +V +   LI+ + R   
Sbjct: 82  MVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCH 141

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +    +  +++K GL PN + +++ I+    EG +  A+ +   M+ +   P+  +YSI
Sbjct: 142 VDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSI 201

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHM--VG---DAYSYNILINYLCKSNNLAAAKQLLSS 454
           + KGLCR G   +  KL      EHM  VG   D   YN +++ LCK   +  A  +   
Sbjct: 202 IIKGLCRVGKTTEVIKLL-----EHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCK 256

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G++P ++TY +LI G    G  + A  +   MK     P+LV ++ +I+ +CK+  
Sbjct: 257 MKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGE 316

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  A+ +L+    +G+  D  TYNTL+NGY +  ++ EA  +F  M + G   +   ++I
Sbjct: 317 VSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSI 376

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           L+N  CK     +A++L   M   G+IPD V+Y TL++   +   P E  EL  DM  +G
Sbjct: 377 LVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436

Query: 634 VSPDNQTYNAIISPL 648
             P+  TY+ ++  L
Sbjct: 437 YPPNLVTYSILLDCL 451



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 3/349 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  +++   ++G T     +++ +KV G    +  +N  +  L K   +     ++ +M 
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G +  V T+  +I+ L    + +EA  L   M    I P++V F+++I+  C+ G++ 
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  + + M  M    V P+  T+N ++NG+C    V  A ++   MI  G   +V +++
Sbjct: 319 EARVILKTMTEMG---VEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFS 375

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L++GY +    +EA +L DEM  RGL+P+ V YN+ I  L        A  +  DM   
Sbjct: 376 ILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSN 435

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P+  TYSIL   L + G + QA  L   +    +  D  +YNI+I+ +CK      A
Sbjct: 436 GYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDA 495

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
           ++L + + V+GL P+       IDG CKGG ++ A + +  M+K +  P
Sbjct: 496 RELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 185/380 (48%), Gaps = 3/380 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F  L+      G    A ++   +  +G+  ++H+++  +  L ++ +     KL + M
Sbjct: 163 TFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHM 222

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +V  +N ++  LCK+  + EA+ ++ +M  +GI P VV +  +I+    +G  
Sbjct: 223 KVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRW 282

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L  +M    G +++P+ V  + +I+  CK G V  A  I   M + G++ +V TY
Sbjct: 283 KEAFGLLNEM---KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATY 339

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TL++GY       EA ++ + M+ +G MP+   ++  ++       ++ A  +  +M  
Sbjct: 340 NTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTH 399

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + PD  +Y+ L  GLC+     +A +L   +       +  +Y+IL++ L K   L  
Sbjct: 400 RGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQ 459

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  +M   GL PD++TY  +IDG CK G  + A +++  +     +PN  +    I+
Sbjct: 460 AMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTID 519

Query: 508 GLCKDASLDAAKSLLQASQR 527
           G+CK   LD A    +  ++
Sbjct: 520 GVCKGGLLDEAHKAFRQMEK 539



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 71/346 (20%)

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           ++  AL   + M++ +  P    +  L   L R    K    L  Q+    +  D  S  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY------ 487
           ILIN  C+  ++     +L  +I  GL P++IT+ TLI+G+C  G I  A++++      
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 488 -----------------------------ENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
                                        E+MK V  +P++VIYN+I++ LCKD  ++ A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 519 KSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +    +  G+L   +TY +LI+G    G+  EAF + +EM+   I  + V +++LI+ 
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDI 310

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF-----------------SKNCSP- 619
           +CK G   +AR ++K M   G+ PD  TY TL+  +                 SK   P 
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370

Query: 620 -----------------EEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                            +E  +L D+M   G+ PD  +YN +IS L
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 1/181 (0%)

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
           NI  A+  + +M      P++V +  + + L +        SL +  +  G+  D ++  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            LIN +     +   F++  ++  +G+  N + ++ LIN  C  G   +A EL  VM+  
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G  P+  +Y+ ++    +     EVI+L + M + G  PD   YN I+  L  ++   + 
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 658 V 658
           V
Sbjct: 251 V 251


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 204/445 (45%), Gaps = 14/445 (3%)

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I  LC+  K      L+  M+K G        N ++    + G+     +L  KM  M 
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM--------IKAGIDCNVRTYATLIDG 333
              + PN VT   +IN  CK  RV+ A E+   M        I   ++ +V  Y TLIDG
Sbjct: 336 ---IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDG 392

Query: 334 YARGGSSEEALRLCDEM-VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
             + G  +E L L + M  ++G  P+ + YN  I      G++E    +  +M  + + P
Sbjct: 393 LCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAP 452

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           +  T + L  G+CR G V  A     +     M GDA +Y  LIN  C  NN   A +L 
Sbjct: 453 NVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELF 512

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           + M+  G  PD I Y TLI G+ + G +  A  V   +KK+  +P+ V YN++I G C+ 
Sbjct: 513 NEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRT 572

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
                   +L+  +  GL  D ITYNTLI     NG +  A  +  +M   G+      Y
Sbjct: 573 NKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATY 632

Query: 572 NILINFLCKFGCYQQARELMKVM-ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
             +IN  C  G   +A E+ K M     + P+ V Y  L+    KN   +  + L +DM 
Sbjct: 633 GAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMK 692

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
           + GV+P+  TYNAI   L  EK  E
Sbjct: 693 IWGVTPNTTTYNAIFKGLRDEKDLE 717



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 231/507 (45%), Gaps = 81/507 (15%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           + R C       G +D+  ++   G  +   A N+ L+ L +     R  +L ++MV   
Sbjct: 277 ITRLCRNRKTNRG-WDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRM--------LKSGIWPNVVCFNMIINEACQ 263
              NV TF ++I  +CK  ++++AL +  +M        +   + P+VV +N +I+  C+
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           VG  +  L L  +M    G    P+++T+NC+I+GFCK G +E  +E+   M K G+  N
Sbjct: 396 VGRQQEGLGLMERMRSQKG--CAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN 453

Query: 324 VRTYATLIDGYARGG-----------------------------------SSEEALRLCD 348
           V T  TL+ G  R G                                   + E+A+ L +
Sbjct: 454 VVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFN 513

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM+K G  P+ +VY + I      G +  A FVL+++    I PD   Y+ L  G CR  
Sbjct: 514 EMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTN 573

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
              + F++  ++ E  +  D  +YN LI Y  K+ +L  A++++  MI  G++P + TYG
Sbjct: 574 KFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYG 633

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            +I+ YC  GN   A++++++MK   K  PN VIYN +IN LCK+  + +A SL++    
Sbjct: 634 AVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLME---- 689

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
                                         +M+  G+  N   YN +   L      ++ 
Sbjct: 690 ------------------------------DMKIWGVTPNTTTYNAIFKGLRDEKDLEKV 719

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFS 614
            E M  MI H   PDY+T   L    S
Sbjct: 720 FEFMDRMIEHACNPDYITMEILTEWLS 746



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 215/459 (46%), Gaps = 33/459 (7%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL--EFA 270
           V+N    N+ +  L +  ++++AL +   M +S    N        N+A   GD+   F 
Sbjct: 187 VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRP-----NDA--TGDILFSFL 239

Query: 271 LKLFRKMGVMSGDSVLPNSV----THNCIINGF---------CKLGRVEFAEEIRYAMIK 317
           LK  R   ++S D ++ N V     H  +I+ F         C+  +     ++   MIK
Sbjct: 240 LKRERNEELLSEDEIV-NLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIK 298

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G         +L+ G AR G+      L ++MV+  + PN V +   I+ +     V+ 
Sbjct: 299 LGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDD 358

Query: 378 ALFVLSDM--------IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-D 428
           AL VL  M        I   + PD   Y+ L  GLC+ G  ++   L  ++  +     D
Sbjct: 359 ALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPD 418

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +YN LI+  CK+  +   K+L   M   G+ P+++T  TL+ G C+ G +  AV  + 
Sbjct: 419 TITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFV 478

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
             ++   K + V Y ++IN  C   + + A  L     + G   DAI Y TLI+G+   G
Sbjct: 479 EAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAG 538

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++A+A  + +E++ +GI  + V YN LI   C+   + +  E++K M   G+ PD +TY 
Sbjct: 539 RMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYN 598

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           TL+   SKN   +   ++   M+ +GV P   TY A+I+
Sbjct: 599 TLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVIN 637



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 153/350 (43%), Gaps = 10/350 (2%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           + S + C      ++ L+    + G  E   ++  ++  +G + ++   N  +  + +  
Sbjct: 409 MRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTG 468

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
            +      + E    G   +  T+  +I A C     E+A+ L+  MLKSG  P+ + + 
Sbjct: 469 RVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYY 528

Query: 256 MIINEACQVG---DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +I+   Q G   D  F L   +K+G+       P++V +N +I GFC+  +     E+ 
Sbjct: 529 TLISGFSQAGRMADASFVLAELKKLGIR------PDTVCYNTLIGGFCRTNKFHRVFEML 582

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +AG+  +  TY TLI   ++ G  + A ++  +M+K G++P    Y + I+     
Sbjct: 583 KEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLN 642

Query: 373 GDVEGALFVLSDM-IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           G+   A+ +  DM     + P+   Y+IL   LC+N  VK A  L   +    +  +  +
Sbjct: 643 GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTT 702

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           YN +   L    +L    + +  MI     PD IT   L +     G IE
Sbjct: 703 YNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/426 (21%), Positives = 181/426 (42%), Gaps = 84/426 (19%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA---VFDALVRAC 156
           +++ +  +RR DDAL +            LE + G  +S  I  +      +++ L+   
Sbjct: 346 LINHMCKFRRVDDALEV------------LEKMSGGKESGGISVSVEPDVVIYNTLIDGL 393

Query: 157 TQIGATEGAYDVIQKLKV-KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
            ++G  +    ++++++  KG +     +N  +    K  EI +  +L+ EM   G   N
Sbjct: 394 CKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN 453

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V T N ++  +C+  ++  A++ +    + G+  + V +  +IN  C V + E A++LF 
Sbjct: 454 VVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFN 513

Query: 276 KM----------------------GVMSGDS----------VLPNSVTHNCIINGFCKL- 302
           +M                      G M+  S          + P++V +N +I GFC+  
Sbjct: 514 EMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTN 573

Query: 303 ----------------------------------GRVEFAEEIRYAMIKAGIDCNVRTYA 328
                                             G ++FA+++   MIKAG+   V TY 
Sbjct: 574 KFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYG 633

Query: 329 TLIDGYARGGSSEEALRLCDEM-VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +I+ Y   G+  EA+ +  +M     + PN V+YN  I+ L     V+ A+ ++ DM  
Sbjct: 634 AVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKI 693

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+  TY+ + KGL     +++ F+  ++++E     D  +  IL  +L     +  
Sbjct: 694 WGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753

Query: 448 AKQLLS 453
            K+ ++
Sbjct: 754 LKKFVA 759


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 220/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        + HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN++++  CK  ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR   VM    V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    PN+V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVV 417



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 152/278 (54%), Gaps = 1/278 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  ++ K G+  +V ++ TL++GY + G  +E  RL   M  
Sbjct: 140 NILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+ LC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
            I TY  +IN +   G +     +  EM+  G   N V
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVV 417



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 141/277 (50%), Gaps = 1/277 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H     G++  A  V   +    + P   +++ L  G  + G + + F+L + + 
Sbjct: 139 FNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A  L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y  M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           P+  TYT ++  F K        +L  +M   G  P+
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPN 415



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 154/294 (52%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + +GG    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + S M    + PD +TYS+L  GLC+   +  A  L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L+PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+     G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISXLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P+ VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++  CK   +  A+ +  S+   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A +L       GL
Sbjct: 178 MNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G +  A  + + + +  +     S+N L+N   K  +L    +L S 
Sbjct: 137 YFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSV 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A  +++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +      LL D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + P+  TY  II+
Sbjct: 377 LKPEIGTYTMIIN 389


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 225/464 (48%), Gaps = 42/464 (9%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A N  L  LV+  E+    K  + M+  G + +V     +I   C+  K ++A  +   +
Sbjct: 108 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEIL 167

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
             SG  P+V+ +N++I   C+ G+++ AL++  +M      SV P+ VT+N I+   C  
Sbjct: 168 ENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM------SVAPDVVTYNTILRSLCDS 221

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G+++ A E+    ++     +V TY  LI+         +A++L DEM K+G  P+ V Y
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281

Query: 363 NSTIHWLFAEGDVEGAL-----------------------------------FVLSDMID 387
           N  I+ +  EG ++ A+                                    +LSDM+ 
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P   T++IL   LCR   + +A  +  ++ +   V ++ SYN L++  C+   +  
Sbjct: 342 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A + L  M+ RG  PDI+TY TL+   CK G ++ AV++   +      P L+ YN++I+
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL K    + A  LL+  +R GL  D ITY+TL+ G    GK+ EA  +F +M  + I  
Sbjct: 462 GLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKP 521

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           + V YN ++  LCK     +A + +  M+  G  P   TYT L+
Sbjct: 522 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 218/427 (51%), Gaps = 7/427 (1%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+ +  L +  +LEE L    RM+  G  P+V+    +I   C+ G  + A ++   M +
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRI---MEI 166

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +     +P+ +T+N +I G+CK G ++ A E+   M    +  +V TY T++      G 
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA+ + D  ++R   P+ + Y   I     +  V  A+ +L +M  K   PD  TY++
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G+C+ G + +A K  N +       +  ++NI++  +C +     A++LLS M+ +G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P ++T+  LI+  C+   +  A+ V E M K    PN + YN +++G C++  +D A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             L+     G   D +TYNTL+     +GK+  A  + +++ + G +   + YN +I+ L
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G  + A EL++ M   G+ PD +TY+TL+    +    +E I++  DM    + P  
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSA 523

Query: 639 QTYNAII 645
            TYNAI+
Sbjct: 524 VTYNAIM 530



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 207/405 (51%), Gaps = 7/405 (1%)

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N+ + +  + G+LE  LK   +M +  GD  +P+ +    +I GFC+ G+ + A  I   
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERM-IYQGD--IPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +  +G   +V TY  LI GY + G  ++AL + + M    + P+ V YN+ +  L   G 
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGK 223

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A+ VL   + +   PD  TY+IL +  C +  V QA KL +++ ++    D  +YN+
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN +CK   L  A + L++M   G  P++IT+  ++   C  G    A ++  +M +  
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P++V +N +IN LC+   L  A  +L+   + G + ++++YN L++G+    K+  A 
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
                M + G   + V YN L+  LCK G    A E++  +   G  P  +TY T++   
Sbjct: 404 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGL 463

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +K    E  +EL ++M   G+ PD  TY+ ++  L  E   ++ +
Sbjct: 464 TKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 226/451 (50%), Gaps = 15/451 (3%)

Query: 129 LEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L+FLE ++   +I    P V    +L+R   + G T+ A  +++ L+  G    +  +N 
Sbjct: 126 LKFLERMIYQGDI----PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K  EI +  ++ + M       +V T+N ++ +LC   KL+EA+ +  R L+  
Sbjct: 182 LIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
            +P+V+ + ++I   C    +  A+KL  +M         P+ VT+N +ING CK GR++
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEM---RKKGCKPDVVTYNVLINGICKEGRLD 295

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A +    M   G   NV T+  ++      G   +A RL  +M+++G  P+ V +N  I
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILI 355

Query: 367 HWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++L  +  +  A+ VL  M  KH C P+  +Y+ L  G C+   + +A +    ++    
Sbjct: 356 NFLCRKRLLGRAIDVLEKM-PKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +YN L+  LCK   + AA ++L+ +  +G  P +ITY T+IDG  K G  E AV+
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           + E M++   KP+++ Y++++ GL ++  +D A  +    + + +   A+TYN ++ G  
Sbjct: 475 LLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 534

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
              + + A    + M   G    +  Y ILI
Sbjct: 535 KAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 197/402 (49%), Gaps = 9/402 (2%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           A P V  ++ L+    + G  + A +V++++ V    V+   +N  L  L    ++    
Sbjct: 172 AVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVVT---YNTILRSLCDSGKLKEAM 228

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++    +      +V T+ ++I A C +  + +A+ L   M K G  P+VV +N++IN  
Sbjct: 229 EVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ A+K    M         PN +THN I+   C  GR   AE +   M++ G  
Sbjct: 289 CKEGRLDEAIKFLNNM---PSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS 345

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+  LI+   R      A+ + ++M K G +PN++ YN  +H    E  ++ A+  
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEY 405

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+ +   PD  TY+ L   LC++G V  A ++ NQ+  +       +YN +I+ L K
Sbjct: 406 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A +LL  M  +GL PDIITY TL+ G  + G ++ A++++ +M+ +  KP+ V 
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVT 525

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLING 542
           YN+I+ GLCK      A   L      G      TY  LI G
Sbjct: 526 YNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 145/300 (48%), Gaps = 6/300 (2%)

Query: 362 YNSTIHW--LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + S IH   L   G++E  L  L  MI +   PD    + L +G CR+G  K+A ++   
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +     V D  +YN+LI   CKS  +  A ++L  M V    PD++TY T++   C  G 
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGK 223

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A++V +   + E  P+++ Y  +I   C D+ +  A  LL   ++ G   D +TYN 
Sbjct: 224 LKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 283

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LING    G++ EA    + M + G   N + +NI++  +C  G +  A  L+  M+  G
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             P  VT+  L+    +       I++ + M   G  P++ +YN ++     EK  +  +
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAI 403



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 125/255 (49%), Gaps = 4/255 (1%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           + F  +I  + L RNG +++  K   +++ +  + D  +   LI   C+S     A +++
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             +   G +PD+ITY  LI GYCK G I+ A++V E M      P++V YN+I+  LC  
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDS 221

Query: 513 ASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             L  A  +L    QR    D ITY  LI     +  + +A  +  EMR  G   + V Y
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N+LIN +CK G   +A + +  M  +G  P+ +T+  ++          +   L  DM+ 
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341

Query: 632 SGVSPDNQTYNAIIS 646
            G SP   T+N +I+
Sbjct: 342 KGCSPSVVTFNILIN 356


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/469 (30%), Positives = 244/469 (52%), Gaps = 6/469 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRM 242
           +N  LS L+KL        LY  + S   ++ ++ TF+++I A  +  ++  A SL   +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           LK G   +V     ++   C  G +  A+ L  +  V  G     + V +  IING CK+
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEY-VDRGFRF--DEVCYGTIINGLCKI 188

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G+   A ++   M K  +  N+  Y T+IDG  + G  +EA  LC EMV+ G+  +   Y
Sbjct: 189 GKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSY 248

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDK-HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           NS IH   + G  + A+ +L +M+ +  + PD +T++IL  GLC+ G V +A+ +   ++
Sbjct: 249 NSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMI 308

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +     D  SYN L+N  C S ++  AKQ+   M+ R  +P++I+Y TLI+GYCK   ++
Sbjct: 309 KRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVD 368

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A+ +   M      P+ V YN +++GL K         L++A +  G   D ITYN L+
Sbjct: 369 EAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLL 428

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           + YF + K  +A A+F  +  +GI+ N   YNIL++ LCK G  + A+E+ +++   G  
Sbjct: 429 DDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQ 488

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           P+  TY  ++    K    +E   L   MV +   P+  T++ I+  +L
Sbjct: 489 PNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 206/399 (51%), Gaps = 3/399 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +   L++     G    A  ++ +   +G       +   ++ L K+ +     +++ +M
Sbjct: 142 ILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKM 201

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N+  +N VI  LCK+  ++EA  L   M+++GI  +V  +N +I+  C VG  
Sbjct: 202 KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRF 261

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+KL  +M V     V P+  T N +I+G CKLGRV  A  +   MIK G   ++ +Y
Sbjct: 262 QAAVKLLDEMVVRG--KVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSY 319

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++GY   GS  EA ++ D+MV+R  +PN + Y + I+       V+ A+ +L++M +
Sbjct: 320 NALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHN 379

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K++ PD  TY+ L  GL ++G     + L   +       D  +YN+L++   K      
Sbjct: 380 KNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDK 439

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L   +I  G+ P+I TY  L+DG CK G ++ A ++++ +     +PN+  YN +I+
Sbjct: 440 ALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIH 499

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFI 545
           GLCK+  LD A++LL +      L + IT++T++    +
Sbjct: 500 GLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILV 538



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 93/203 (45%), Gaps = 20/203 (9%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA 155
           S C +++     R  D+A++L+  + + N V                      ++ L+  
Sbjct: 353 SYCTLINGYCKVRMVDEAMVLLTEMHNKNLV-----------------PDTVTYNCLLDG 395

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
            ++ G +   +D+++ ++  G    +  +N  L    K  +  +   L++ ++  G   N
Sbjct: 396 LSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPN 455

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           + T+N+++  LCK  +L+ A  ++  +   G  PN+  +N++I+  C+ G L+ A  L  
Sbjct: 456 IRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLY 515

Query: 276 KMGVMSGDSVLPNSVTHNCIING 298
           K   M  ++ LPN +T + I+  
Sbjct: 516 K---MVNNNYLPNYITFDTIVRA 535


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 220/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++ CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL      FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLNEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           ++ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L   GD++ A  ++++M
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 417



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 160/314 (50%), Gaps = 36/314 (11%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY + G   E  RL + M  
Sbjct: 140 NILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  +++ L  G C++G V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK+ +L  A+ L++ M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++  S+DA K            
Sbjct: 320 GSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK------------ 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                  M  EM +VG+      Y ++IN  CK G      +LM
Sbjct: 368 -----------------------MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 404

Query: 592 KVMILHGIIPDYVT 605
           K M   G +P  VT
Sbjct: 405 KEMQRDGYVPSVVT 418



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 144/276 (52%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + L  A +L   M+  GL+P+ +++ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK+  L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G++    ++   M+    +P++  Y+ +INGLCK++ LD A  L       GL
Sbjct: 178 MNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + +++++ TLI+G+  +G++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 131/254 (51%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CKD  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G   NG + +A  + +EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 230/467 (49%), Gaps = 4/467 (0%)

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           V+G   +   +  +L  L    ++   W   + +   GY  N   FN VI+  C + ++ 
Sbjct: 241 VEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVH 300

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +A+ ++  M K G  P+V  ++++++  C+ GD+   L  +  +  M+ + + PN V+++
Sbjct: 301 KAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDV---LTGYYMLVEMARNGITPNLVSYS 357

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +++G C+ GRVE A E+   +   G   +   Y+ ++ G  +    E    L ++MV  
Sbjct: 358 SLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH 417

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
             +P+   Y+S I+       ++ AL V   M+   ICP+  T +IL  G    G + +A
Sbjct: 418 NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEA 477

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F   ++V +  +V    +Y ++I+ LCK N       + + MI RG +PD + Y  +IDG
Sbjct: 478 FLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDG 537

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           + K  +++ A ++Y  M     KPN+  Y S+INGLC D  L    +L +     GL  D
Sbjct: 538 FVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPD 597

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            I Y +LI  Y     +  A  +F EM   G++ +   Y  LI    K      A+  M+
Sbjct: 598 RILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFME 657

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
            M+  G+ P  VTYT L+  + K    ++ + +++ M+ +G++PD +
Sbjct: 658 EMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAK 704



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 241/504 (47%), Gaps = 8/504 (1%)

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
           P V+  ++R   ++   E A  ++  ++ K   V +   N  L  LV+ N+I     L+ 
Sbjct: 143 PQVYATVIRVFVELSMFEDA--LVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFD 200

Query: 206 EMVSCGYVENVNTFNLVI--YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +M S G   NV ++++++  Y    +  LEEAL L   M   G+ PN   +   +   C 
Sbjct: 201 DMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCH 260

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
              ++ A   F +M    G     N+   N +I+GFC  G+V  A E+   M K G   +
Sbjct: 261 AKQVKSAWN-FLQMLCQRGYPC--NNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPD 317

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V +Y+ L+DG  + G       +  EM + G+ PN V Y+S +H L   G VE A  +  
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFK 377

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            + D+    DH  YSI+  G C++  ++  + L N ++  + V DAY+Y+ LI   C+  
Sbjct: 378 RLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHR 437

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            L  A ++   M+  G+ P+++T   L+ G+   G I  A    + +++    P+L  Y 
Sbjct: 438 QLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYR 497

Query: 504 SIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            II+GLCK +   D         +R  + D + Y+ +I+G+     + EAF ++ +M + 
Sbjct: 498 VIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDE 557

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   N   Y  LIN LC      +   L K MI  G+ PD + YT+L+  + K  + +  
Sbjct: 558 GTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAA 617

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
           +E+  +M   G+S D+  Y  +I 
Sbjct: 618 LEIFREMETEGLSADSFVYTCLIG 641



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 194/429 (45%), Gaps = 35/429 (8%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N ++  L +  ++  A SL+  M  SG  PNV  ++++++     G      +    +  
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTH-GAKLCLEEALELLSE 238

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M  + V PN+ T+   + G C   +V+ A      + + G  CN   +  +I G+   G 
Sbjct: 239 MEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQ 298

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A+ + D M K G +P+   Y+  +  L  +GDV    ++L +M    I P+  +YS 
Sbjct: 299 VHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSS 358

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLCR G V+ AF+L  ++ ++    D   Y+I+++  C+  +L     L + M+   
Sbjct: 359 LLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHN 418

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +PD   Y +LI  YC+   ++ A++V+E M              + +G+C +       
Sbjct: 419 FVPDAYNYSSLIYAYCRHRQLKEALEVFELM--------------VSDGICPNV------ 458

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                         +T   L++G+   G I EAF    ++R  G+  +   Y ++I+ LC
Sbjct: 459 --------------VTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLC 504

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K         +   MI  G +PD V Y+ ++  F K    +E   L+  MV  G  P+  
Sbjct: 505 KVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564

Query: 640 TYNAIISPL 648
           TY ++I+ L
Sbjct: 565 TYTSLINGL 573



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 3/252 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           LV   +  G    A+  + K++  G   S+  +   +  L K+N+    W ++ +M+  G
Sbjct: 464 LVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRG 523

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           YV +   ++++I    K   L+EA  LYY+M+  G  PN+  +  +IN  C    L   +
Sbjct: 524 YVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVM 583

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            LF+ M    G+ + P+ + +  +I  +CK   ++ A EI   M   G+  +   Y  LI
Sbjct: 584 TLFKHM---IGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLI 640

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G+++  + + A    +EM+ +GL P  V Y   I   F  GD + A+ + + M+   I 
Sbjct: 641 GGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIA 700

Query: 392 PDHFTYSILTKG 403
           PD     IL  G
Sbjct: 701 PDAKLSCILGLG 712


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/419 (32%), Positives = 222/419 (52%), Gaps = 15/419 (3%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           E AL+ Y R L     PN V   + +     + D++ +L  FR +        + N+ T 
Sbjct: 22  EAALAKYSRNL----VPNTVGRVLQV-----IKDVDVSLFFFRWVTRSHRGESIHNNFTC 72

Query: 293 NCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           NC++    K  R   A +I R  ++    D N  TY TLI G+ + G  E A +L  EM 
Sbjct: 73  NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +RG  P+ V ++S +  L   G++  A+    + ++    PD   ++IL  GLC+   + 
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLS 190

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A ++  ++ E  +V D  +YN LI+ LCKS  +  A+QLL +M+ R + P+++TY TLI
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLI 250

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            GYCK G    A Q+ E M +    P++V +NS+I+G C+ + +D A  +L   ++ GL 
Sbjct: 251 YGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK-GLC 309

Query: 532 --DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             + +TYN LI+G    G+  EA  + SEM   GI  + + YN LI   C+    +QA +
Sbjct: 310 APNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQ 369

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  +M+  G+IPD ++Y TL     K+   +E   L D+M  +G  P+  T+N+++  L
Sbjct: 370 IQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGL 428



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 234/473 (49%), Gaps = 14/473 (2%)

Query: 180 SIHAWNNF-----LSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLE 233
           SIH  NNF     L  LVK     + ++++++ +   + + N  T+N +I   CK   +E
Sbjct: 65  SIH--NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDME 122

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            A  L   M + G  P+VV  + I+   C  G+L  A++ FR+          P+SV  N
Sbjct: 123 RAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE-----SVECAPDSVLFN 177

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +++G CK  ++  A ++   M + GI  +V TY +LIDG  +    EEA +L + MVKR
Sbjct: 178 ILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR 237

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
            + PN V YN+ I+     G    A  ++  MI     PD  T++ L  G C+   + +A
Sbjct: 238 KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKA 297

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            ++ + + +     +  +YN+LI+ LC +     A +LLS M  RG++PDIITY +LI  
Sbjct: 298 CEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGI 357

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           +C+   IE A Q+   M +    P+ + Y ++   L K    D A +LL      G + +
Sbjct: 358 FCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             T+N+L+ G   + ++ EA  + + MR VG       Y +L+  LCK G    A+E++ 
Sbjct: 418 LFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLV 477

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +M+  GI P   +  T+V   ++    +  +   D +V +     + +Y  ++
Sbjct: 478 MMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLL 530



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 251/541 (46%), Gaps = 25/541 (4%)

Query: 41  VNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFS--HSLESSC 98
           V  R      L + + +L  + V RV+ +  K   ++L F+ WV  ++R    H+  +  
Sbjct: 15  VGDRPEAEAALAKYSRNLVPNTVGRVL-QVIKDVDVSLFFFRWVTRSHRGESIHNNFTCN 73

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
            ++  LV  RR   A  +              F + LL  +  C      ++ L+    +
Sbjct: 74  CLLRTLVKARRHHQAYQI--------------FRDELLGQH--CDTNHITYNTLIGGFCK 117

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A+ ++ ++K +GHS  +   ++ +  L     + R  + ++E V C    +   
Sbjct: 118 AGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVL 175

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN++++ LCK  +L EA  +   M + GI P+VV +N +I+  C+   +E A +L     
Sbjct: 176 FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLE--- 232

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M    V PN VT+N +I G+CK G    A ++   MI++G   +V T+ +LI G+ +  
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             ++A  +   M K    PN V YN  I  L   G    A  +LS+M  + I PD  TY+
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L    CRN  ++QAF++ N ++E  ++ D  SY  L   L KS     A  LL +M   
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G IP++ T+ +L++G C    ++ A  +   M++V   P    Y  ++ GLCK   +D A
Sbjct: 413 GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472

Query: 519 KSLLQASQRIGLLDAITYN-TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K +L      G+   ++ + T+++     GK   A   F ++           Y  L+ F
Sbjct: 473 KEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEF 532

Query: 578 L 578
           +
Sbjct: 533 V 533



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 173/303 (57%), Gaps = 3/303 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           DE++ +    N++ YN+ I      GD+E A  +L++M ++   PD  T+S + + LC  
Sbjct: 94  DELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNT 153

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + +A +   + +E     D+  +NIL++ LCK+N L+ A+Q++  M  RG++PD++TY
Sbjct: 154 GNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTY 211

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            +LIDG CK   +E A Q+ E M K + +PNLV YN++I G CK      A  L++   +
Sbjct: 212 NSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQ 271

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G   D +T+N+LI+G+    KI +A  +   M+    A N V YN+LI+ LC  G   +
Sbjct: 272 SGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANE 331

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A EL+  M   GI+PD +TY +L+  F +N   E+  ++ + MV  GV PD  +Y  +  
Sbjct: 332 ACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAV 391

Query: 647 PLL 649
            LL
Sbjct: 392 ALL 394



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 231/473 (48%), Gaps = 24/473 (5%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIH-AWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + L+R   +      AY + +   +  H  + H  +N  +    K  ++ R ++L  EM 
Sbjct: 73  NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G+  +V T + ++ ALC    L  A+  +   ++    P+ V FN++++  C+   L 
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLS 190

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A ++  +M   S   ++P+ VT+N +I+G CK  R+E A ++   M+K  +  N+ TY 
Sbjct: 191 EARQMIEEM---SERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI GY + G +  A +L + M++ G  P+ V +NS I     +  ++ A  VL  ++ K
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH-LMKK 306

Query: 389 HIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            +C P+  TY++L  GLC  G   +A +L +++    ++ D  +YN LI   C++  +  
Sbjct: 307 GLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQ 366

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A Q+ + M+ RG+IPD I+Y TL     K    + A  + +NM      PNL  +NS++ 
Sbjct: 367 AFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLME 426

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC    LD A+ LL   +R+G   A  TY  L+ G    G++ +A  +   M + GI  
Sbjct: 427 GLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
                  +++ L        ARE  + + LH        +  +V   SK C P
Sbjct: 487 LVSSSGTIVHTL--------AREGKQDLALH-------YFDQVVAAESKACDP 524



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 205/441 (46%), Gaps = 7/441 (1%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYY-RMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           + N  T N ++  L K  +  +A  ++   +L      N + +N +I   C+ GD+E A 
Sbjct: 66  IHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAF 125

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L  +M    G S  P+ VTH+ I+   C  G +  A +     ++   D  +  +  L+
Sbjct: 126 QLLAEMK-ERGHS--PDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVL--FNILV 180

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G  +     EA ++ +EM +RG++P+ V YNS I  L     +E A  +L  M+ + + 
Sbjct: 181 HGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVR 240

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ L  G C+ GC   A +L  ++++     D  ++N LI+  C+ + +  A ++
Sbjct: 241 PNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEV 300

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M      P+++TY  LI G C  G    A ++   M      P+++ YNS+I   C+
Sbjct: 301 LHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCR 360

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  ++ A  +       G++ D I+Y TL      + +  EAFA+   M + G   N   
Sbjct: 361 NFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFT 420

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N L+  LC      +AR L+ VM   G  P   TY  LVT   K    ++  E+   MV
Sbjct: 421 FNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMV 480

Query: 631 LSGVSPDNQTYNAIISPLLGE 651
             G+ P   +   I+  L  E
Sbjct: 481 SEGIQPLVSSSGTIVHTLARE 501


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 165/607 (27%), Positives = 285/607 (46%), Gaps = 38/607 (6%)

Query: 73  SPKLALEFYTWVGENNRFSHSLE--SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           +P+  L F+ W      FS  L   +  +++ L+V +R F +  +++ ++ + N    LE
Sbjct: 71  NPQHGLYFFHW-ASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLE 129

Query: 131 FLE---------GLLDS-----YEICK---ATPAVF--DALVRACTQIGATEGAYDVIQK 171
            L          G +D      Y +C+     P V   ++L+    + G  + A ++  K
Sbjct: 130 ALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDK 189

Query: 172 LKVKG--HSVSIHAWNNFLSHLVK-LNEIGRF---WKLYKEMVSCGYVENVNTFNLVIYA 225
           +  +G  H + +   N  +  +VK L ++G+     KL  +    G V NV  +N++I  
Sbjct: 190 MLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDG 249

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
            CK+  L+ A  ++  +   G  P +  +  +I+  C+ G  +   +L  +M VM G +V
Sbjct: 250 YCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVM-GLNV 308

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
             N    N II+   K G V+ A E+   M + G + ++ TY  LI+    GG  +EA  
Sbjct: 309 --NVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEE 366

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGD---VEGALFVLSDMIDKHICPDHFTYSILTK 402
             +   +R L+PN   Y   +H    +GD       LF +++  DK   PD  +Y     
Sbjct: 367 FLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK---PDLVSYGAFIH 423

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G    G +  A  +  +++E+ +  DA  YN+L++ LCK     AAK LLS M+   L P
Sbjct: 424 GSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQP 483

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D   Y TL+DG+ +   ++ A +++E +      P +V YN +I GLCK   +  A S +
Sbjct: 484 DAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYV 543

Query: 523 QASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              +      D  T++T+I+GY     +  A  MF +M       N V Y  LIN  CK 
Sbjct: 544 NKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKI 603

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
               +A ++ + M    + P+ VTYT L+  FSK   PE+     + M+++   P++ T+
Sbjct: 604 ADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTF 663

Query: 642 NAIISPL 648
           + +I+ L
Sbjct: 664 HYLINGL 670



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 240/505 (47%), Gaps = 27/505 (5%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++    + G  + A  V ++LK+KG   ++  +   +    K  +     
Sbjct: 236 CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVD 295

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L  EM   G   NV  FN +I A  K   +++A  +   M + G  P++  +N++IN +
Sbjct: 296 QLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFS 355

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G ++ A +   +       ++LPN  ++  +++ +CK G    A ++ + + + G  
Sbjct: 356 CSGGRIKEAEEFLERA---KERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK 412

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ +Y   I G   GG  + AL + ++M+++G+ P+  +YN  +  L  +G    A  +
Sbjct: 413 PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLL 472

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           LS+M+D ++ PD + Y+ L  G  RN  + +A +L   V+ + +      YN++I  LCK
Sbjct: 473 LSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCK 532

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A   ++ M +    PD  T+ T+IDGY K  +++ A++++  M K + KPN+V 
Sbjct: 533 CGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVA 592

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y S+ING CK A +  A+ + +A Q   L  + +TY  LI G+   GK  +A + F  M 
Sbjct: 593 YTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELML 652

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
                 N   ++ LIN L                         +T TTL+   ++     
Sbjct: 653 MNNCLPNDTTFHYLINGLTN-----------------------ITNTTLLIEKNEENDRS 689

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
            +++    M+  G S    TYN+II
Sbjct: 690 LILDFFATMISEGWSQVIATYNSII 714



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 189/417 (45%), Gaps = 16/417 (3%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+ A  + G    A D++ K+   G    + ++  F+   V   EI     + ++M+
Sbjct: 383 YTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMM 442

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +   +N+++  LCK+ +   A  L   ML   + P+   +  +++   +  +L+
Sbjct: 443 EKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELD 502

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +LF    V+    + P  V +N +I G CK G++  A      M  A    +  T++
Sbjct: 503 KATELFE---VVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHS 559

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           T+IDGY +    + AL++  +M+K+   PN V Y S I+      D+  A  V   M   
Sbjct: 560 TVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSF 619

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC-------- 440
           ++ P+  TY+IL  G  + G  ++A      +L  + + +  +++ LIN L         
Sbjct: 620 NLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLL 679

Query: 441 ----KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
               + N+ +      ++MI  G    I TY ++I   CK G ++ A  +   M +    
Sbjct: 680 IEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFL 739

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEA 552
            + V ++++++GLC+       ++++     +I    A  Y+  ++ Y  +GK +EA
Sbjct: 740 MDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEA 796



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 149/321 (46%), Gaps = 15/321 (4%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           + +   +   ++ NE+ +  +L++ ++S G    V  +N++I  LCK  K+ +A+S   +
Sbjct: 486 YMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNK 545

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M  +   P+    + +I+   +  DL+ ALK+F   G M      PN V +  +INGFCK
Sbjct: 546 MKIANHAPDEYTHSTVIDGYVKQHDLDSALKMF---GQMMKQKYKPNVVAYTSLINGFCK 602

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +  +  AE++  AM    ++ NV TY  LI G+++ G  E+A    + M+    +PN+  
Sbjct: 603 IADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTT 662

Query: 362 YNSTIHWLF------------AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           ++  I+ L              E D    L   + MI +       TY+ +   LC++G 
Sbjct: 663 FHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGM 722

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A  L  ++L +  + D+  ++ L++ LC++      + ++S  + +        Y  
Sbjct: 723 VDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSL 782

Query: 470 LIDGYCKGGNIEGAVQVYENM 490
            +D Y   G    A  +  N+
Sbjct: 783 KLDKYLYDGKPSEASYILLNL 803


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 268/588 (45%), Gaps = 74/588 (12%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           + +E +   + + ++  +V D+L+RA         A +++ +++  G   S         
Sbjct: 180 DLVEFMWRGHHVYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFK 239

Query: 190 HLVKLNEIGRFWKLYKEMV-----SCGYV------------------------------E 214
            L+++ + G  WKL+K+++      C Y                                
Sbjct: 240 LLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEP 299

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N   +N+VI A C   +  +AL+ +  M++ G  P VV FN +IN  C+ G++  A KLF
Sbjct: 300 NAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLF 359

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
             +  M      PN++ +N ++NG+ K+  ++ A  +   M K GI  +  T+  L+ G+
Sbjct: 360 DGLKEMGFS---PNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 416

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD- 393
            + G  E+  RL  ++   GL+P+  +++ ++  L   G ++ A+  L DM++K + P  
Sbjct: 417 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 476

Query: 394 ---------------------------HF-------TYSILTKGLCRNGCVKQAFKLHNQ 419
                                      HF       T S L  GL  NG +++A +L  Q
Sbjct: 477 IAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQ 536

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++E+ +  +  ++ +L++   K  ++  A+ L   M  RG+ PD++ +   IDG  K G 
Sbjct: 537 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 596

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           +E A  V+  M +    PN   YNS+I G CK   L+ A  L +  +  GLL D  T N 
Sbjct: 597 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNM 656

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G    G++  A  +F +M   G++ + + YN LIN  CK      A  L+  M   G
Sbjct: 657 IIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASG 716

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             PD  TY   +  F  +      + + D++V +G+ P+  TYN++++
Sbjct: 717 SNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLN 764



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 238/483 (49%), Gaps = 5/483 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   F+ ++ A  + G    A  +   LK  G S +   +N  ++  VK+ EI +  
Sbjct: 332 CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQAN 391

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            LY+EM   G   +  TFN+++    K  + E+   L   +   G+ P+   F++ ++  
Sbjct: 392 MLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGL 451

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G L+ A++    M +  G S  P+ +  N +I  + + G  + A E    M+  G+ 
Sbjct: 452 CWAGRLDEAMEFLMDM-LEKGLS--PSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLT 508

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T ++L+ G +  G  +EA  L  +M+++GL  NN+ +   +   F  GDV GA  +
Sbjct: 509 PSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSL 568

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  + I PD   +S    GL + G V++A+ +  ++L + ++ + ++YN LI   CK
Sbjct: 569 WGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCK 628

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A +L   M  RGL+PDI T   +I G CK G +  A+ V+ +M +    P+++ 
Sbjct: 629 CGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIIT 688

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN++ING CK   +  A +L+      G   D  TYN  I+G+  + ++  A  M  E+ 
Sbjct: 689 YNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELV 748

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           + GI  N V YN ++N +C      +A  L   ++    +P+ VT   L+++F K   PE
Sbjct: 749 SAGIVPNTVTYNSMLNGVCS-DILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPE 807

Query: 621 EVI 623
             +
Sbjct: 808 RTL 810



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 165/321 (51%), Gaps = 1/321 (0%)

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +L+  +       +AL +   M + G+ P+          L   GD      +  D+I +
Sbjct: 201 SLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRR 260

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P  +T+S +  G CR GC+     L + + + H   +A++YNI+IN  C     + A
Sbjct: 261 GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA 320

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
               + MI RG  P ++T+ T+I+ +CK GN+  A ++++ +K++   PN ++YN+++NG
Sbjct: 321 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 380

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
             K   +D A  L +  ++ G+  D IT+N L++G++  G+  +   +  ++  +G+  +
Sbjct: 381 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 440

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
           +  ++I ++ LC  G   +A E +  M+  G+ P  + + +++  +S+    ++  E + 
Sbjct: 441 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500

Query: 628 DMVLSGVSPDNQTYNAIISPL 648
            MV  G++P   T ++++  L
Sbjct: 501 LMVHFGLTPSPSTCSSLLMGL 521


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 258/539 (47%), Gaps = 13/539 (2%)

Query: 116 LMGNLMSANSVSPLEFL-EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           L+  L+    + PL  L   LL S+     T A+ DA +    ++     A  ++   + 
Sbjct: 109 LLPTLLDFVPLDPLRHLHRHLLASF----PTSALADAALSTYARLRLPHLAAQLLHSFRR 164

Query: 175 KG-HSVSIHAWNNFLSHLVKLNEIGRFWKL--YKEMVSCGYVENVNTFNLVIYALCKECK 231
           +G    S+ A N  LS L +         L  +  +++     N  TFNL+++  C +  
Sbjct: 165 RGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGT 224

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L +ALS   +M   G+ P+ V +N ++N  C+ G L  A  L  +M     + ++P   T
Sbjct: 225 LADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM---KKEGIVPTRAT 281

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +++ + +LG ++ A ++  AM   G + ++ TY  L  G  + G  +EA +L DEM 
Sbjct: 282 YNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME 341

Query: 352 KRGLM-PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           + G++ P+ V YN+ +   F       AL +L +M +K +     T++I+ KGLCR G +
Sbjct: 342 QLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQL 401

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           ++A      + EE +  D  +YN LI+  CK+ N+A A  L+  M+  GL  D  T  TL
Sbjct: 402 EEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTL 461

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           +   CK    E A ++     +    P+ V Y +++    K+   + A  L     +  L
Sbjct: 462 LYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKL 521

Query: 531 LDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             +I TYNTLI G    GK+ EA    +E+  +G+  +   YNI+I+  CK G  ++A +
Sbjct: 522 TPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               M+ +   PD VT  TL+         E+ ++L +  V  G   D  TYN +I  L
Sbjct: 582 FHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 243/504 (48%), Gaps = 41/504 (8%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T A ++ LV A  ++G  + A DV++ +   G    +  +N   + L +  ++   +KL 
Sbjct: 278 TRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLK 337

Query: 205 KEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
            EM   G V  +V T+N ++ A  K  +  +AL+L   M + G+  ++V  N+I+   C+
Sbjct: 338 DEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCR 397

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G LE AL    ++ +M+ + + P+ +T+N +I+  CK G V  A  +   M+++G+  +
Sbjct: 398 EGQLEEALG---RLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             T  TL+    +    EEA  L     +RG +P+ V Y + +   F E   E AL +  
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWD 514

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +MI + + P   TY+ L KGL   G + +A    N+++E  +V D  +YNI+I+  CK  
Sbjct: 515 EMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEG 574

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +L  A Q  + M+     PD++T  TL++G C  G +E A++++E+  +  KK +++ YN
Sbjct: 575 DLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYN 634

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  LCKD  +D A       +  GL  D  TYN L++     G+  EA  M  ++   
Sbjct: 635 TLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNES 694

Query: 563 G---------------------------IAVNKVG---------YNILINFLCKFGCYQQ 586
           G                             +  VG         YN  I  LC  G  ++
Sbjct: 695 GKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKE 754

Query: 587 ARELMKVMILHGIIPDYVTYTTLV 610
           A+ ++  M+  G+  D  TY TL+
Sbjct: 755 AKAVLDEMMQKGMSVDNSTYITLM 778



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 5/331 (1%)

Query: 331 IDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDV--EGALFVLSDMID 387
           +  YAR      A +L     +RG + P+    N+ +  L        + +L     +I 
Sbjct: 143 LSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIA 202

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+H+T+++L    C  G +  A    +++    +  DA +YN L+N  C+   L  
Sbjct: 203 LRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGE 262

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+ LL+ M   G++P   TY TL+  Y + G I+ A  V E M     +P+L  YN +  
Sbjct: 263 ARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAA 322

Query: 508 GLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           GLC+   +D A  L    +++G++  D +TYNTL++  F   + ++A  +  EMR  G+ 
Sbjct: 323 GLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVK 382

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + V +NI++  LC+ G  ++A   +++M   G+ PD +TY TL+    K  +  +   L
Sbjct: 383 SSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVL 442

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            D+MV SG+  D  T N ++  L  EK  E+
Sbjct: 443 MDEMVRSGLKMDTFTLNTLLYNLCKEKRYEE 473



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 167/370 (45%), Gaps = 41/370 (11%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP V  ++ L+ A  + G    A+ ++ ++   G  +     N  L +L K        +
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L +     G+V +  ++  V+ A  KE K E AL L+  M+K  + P++  +N +I    
Sbjct: 477 LLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLS 536

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G L  A+    ++  M    ++P+  T+N II+ +CK G +E A +    M++     
Sbjct: 537 TMGKLTEAIDKLNELMEMG---LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP 593

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V T  TL++G    G  E+A++L +  V++G   + + YN+ I  L  + DV+ AL   
Sbjct: 594 DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF 653

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE------------------- 423
           +DM  + + PD FTY++L   L   G   +A K+ +++ E                    
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV 713

Query: 424 ------------HMVG-----DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
                         VG     D  SYN  I  LC    L  AK +L  M+ +G+  D  T
Sbjct: 714 ETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNST 773

Query: 467 YGTLIDGYCK 476
           Y TL++G  K
Sbjct: 774 YITLMEGLIK 783


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN++++   KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL      FR    M    V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLNEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++   KP++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVV 417



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 152/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++GF K G +  A+ +  A+ K G+  +V ++ TL++GY + G   E  RL + M  
Sbjct: 140 NILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  MI++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A  L   M+ +GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+ G+ + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
                + + M    + PD +TYS+L  GLC+   +  A  L +++L++ +V +  ++  L
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G  P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 127/228 (55%), Gaps = 1/228 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y +NIL++   K   +  A+ +  ++   GL P ++++ TL++GY K G++    ++   
Sbjct: 137 YFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M+    +P++  Y+ +INGLCK++ +D A  L       GL+ + +T+ TLI+G+  NG+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +  A  ++ +M +  ++ + + YN LI  LCK G  +QA++L+  MI+ G+ PD +TYTT
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    K    E   E    M+   +  D+  Y A+IS L  E  + D
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL  G  + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A  +++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 266/581 (45%), Gaps = 41/581 (7%)

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQI 159
           H LV  R F   ++    ++   SV  +E    LL     C   P V  F  L+    + 
Sbjct: 240 HRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL---------------- 203
           G  + A+D+ + ++ +G    + A++  +    K   +G   KL                
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359

Query: 204 -------------------YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
                              YK M+  G   NV T+ ++I  LC++ ++ EA  +Y ++LK
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G+ P++V ++ +I+  C+ G+L     L+  M  M      P+ V +  +++G  K G 
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG---YPPDVVIYGVLVDGLSKQGL 476

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A      M+   I  NV  + +LIDG+ R    +EAL++   M   G+ P+   + +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            +     EG +E ALF+   M    + PD   Y  L    C++       +L + +    
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  D    N++I+ L K + +  A +  +++I   + PDI+TY T+I GYC    ++ A 
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGY 543
           +++E +K     PN V    +I+ LCK+  +D A  +    +++    +A+TY  L++ +
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
             +  I  +F +F EM+  GI+ + V Y+I+I+ LCK G   +A  +    I   ++PD 
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           V Y  L+  + K     E   L++ M+ +GV PD+    A+
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 150/594 (25%), Positives = 275/594 (46%), Gaps = 21/594 (3%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
           +L  +  N V+      P  AL+++ W       S    S   I H+L+    FD A  +
Sbjct: 66  NLQRNETNLVLLSLESEPNSALKYFRWA----EISGKDPSFYTIAHVLIRNGMFDVADKV 121

Query: 117 MGNLMSANSVSPLEFLEGLLD---SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
              +++ N       L  + D     ++CK        L+  C + G  + A ++     
Sbjct: 122 FDEMIT-NRGKDFNVLGSIRDRSLDADVCKF-------LMECCCRYGMVDKALEIFVYST 173

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY-VENVNTFNLVIYALCKECKL 232
             G  +   +    L+ L+  + +      + ++   G     V+    V+ AL  + ++
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEV 233

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
            +AL  +  +++ G    +V  N ++ +   V  +E A +L   + ++      PN VT 
Sbjct: 234 TKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRL---LSLVLDCGPAPNVVTF 289

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             +INGFCK G ++ A ++   M + GI+ ++  Y+TLIDGY + G      +L  + + 
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +G+  + VV++STI      GD+  A  V   M+ + I P+  TY+IL KGLC++G + +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF ++ Q+L+  M     +Y+ LI+  CK  NL +   L   MI  G  PD++ YG L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G  K G +  A++    M     + N+V++NS+I+G C+    D A  + +     G+  
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D  T+ T++    + G++ EA  +F  M  +G+  + + Y  LI+  CK        +L 
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            +M  + I  D      ++    K    E+  +  ++++   + PD  TYN +I
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 235/525 (44%), Gaps = 40/525 (7%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G    A D  + +  +G  V I + N  L  L  +++I    +L   ++ CG   NV TF
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTF 289

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I   CK  +++ A  L+  M + GI P+++ ++ +I+   + G L    KLF +  +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ-AL 348

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
             G  V  + V  +  I+ + K G +  A  +   M+  GI  NV TY  LI G  + G 
Sbjct: 349 HKG--VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  +  +++KRG+ P+ V Y+S I      G++     +  DMI     PD   Y +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GL + G +  A +   ++L + +  +   +N LI+  C+ N    A ++   M + G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           + PD+ T+ T++      G +E A+ ++  M K+  +P+ + Y ++I+  CK        
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586

Query: 520 SLLQASQR-------------IGLL-----------------------DAITYNTLINGY 543
            L    QR             I LL                       D +TYNT+I GY
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
               ++ EA  +F  ++      N V   ILI+ LCK      A  +  +M   G  P+ 
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           VTY  L+  FSK+   E   +L ++M   G+SP   +Y+ II  L
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 190/402 (47%), Gaps = 12/402 (2%)

Query: 262 CQVGDLEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           C+ G ++ AL++F    ++GV     V+P    +  ++N      RV+   +    + + 
Sbjct: 157 CRYGMVDKALEIFVYSTQLGV-----VIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCRG 210

Query: 319 GID-CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           GI+   V  +  ++D     G   +AL     +++RG     V  N  +  L  +  +E 
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +LS ++D    P+  T+  L  G C+ G + +AF L   + +  +  D  +Y+ LI+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
              K+  L    +L S  + +G+  D++ + + ID Y K G++  A  VY+ M      P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           N+V Y  +I GLC+D  +  A  +     + G+  +I TY++LI+G+   G +   FA++
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            +M  +G   + V Y +L++ L K G    A      M+   I  + V + +L+  + + 
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              +E +++   M + G+ PD  T+  ++   + E   E+ +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 100/222 (45%), Gaps = 19/222 (8%)

Query: 74  PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL----MSANSVS-- 127
           P + L+ +  + + N+ S  +     ++HLL    R +DA     NL    M  + V+  
Sbjct: 582 PTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640

Query: 128 -------PLEFLEGLLDSYEICKATP-----AVFDALVRACTQIGATEGAYDVIQKLKVK 175
                   L  L+     +E+ K TP          L+    +    +GA  +   +  K
Sbjct: 641 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   +   +   +    K  +I   +KL++EM   G   ++ +++++I  LCK  +++EA
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            +++++ + + + P+VV + ++I   C+VG L  A  L+  M
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 227/453 (50%), Gaps = 7/453 (1%)

Query: 198 GRFW---KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           GR W        MV  G   +V TF  +++ALC+E  + EA  L+  +   GI PN   +
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N +++   +  ++  A  L+ +M       V P+ VT N ++ G  K GR+E ++ +   
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRT---TGVSPDCVTFNILVWGHYKYGRIEDSDRLLKD 412

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +I +G+  +   Y  ++      G  +EA++L  E++++GL  + V +NS I      G 
Sbjct: 413 LIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGL 472

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            + A      M+     P   T + L  GLCR G +++A  L  ++LE+    +  +Y +
Sbjct: 473 EDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTV 532

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L++   K NNL  A+ L   M  RG+ PD + +  LIDG  K GN+E A +V+  M  + 
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG 592

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             PN   YNS+I GLC    +  A  L +  ++ GLL D  T+N +I+G+   G++  A 
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAI 652

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
             F +M+ +G+  +   +NILI   CK      A E++  M   G+ PD  TY T +  +
Sbjct: 653 ETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGY 712

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            +     + + + D ++ +G+ PD  TYN ++S
Sbjct: 713 CRMRKMNQAVIILDQLISAGIVPDTVTYNTMLS 745



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 228/442 (51%), Gaps = 5/442 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A+++ L+    +      A  + ++++  G S     +N  +    K   I    +L K+
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKD 412

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           ++  G   + + +++++ +LC   +L+EA+ L   +L+ G+  +VV FN +I    + G 
Sbjct: 413 LIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGL 472

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + A + +R   +M      P+S T N ++ G C+ G ++ A  + Y M++ G   N   
Sbjct: 473 EDKAFEAYR---IMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVA 529

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+DGY +  + E A  L  EM +RG+ P+ V + + I  L   G+VE A  V  +M 
Sbjct: 530 YTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMS 589

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                P++F Y+ L +GLC  G V +A KL  ++ ++ ++ D +++NI+I+  C+   + 
Sbjct: 590 AIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMK 649

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +    M   GL+PDI T+  LI GYCK  ++ GA ++   M      P++  YN+ +
Sbjct: 650 FAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYM 709

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G C+   ++ A  +L      G++ D +TYNT+++G   +  +  A  + +++  +G  
Sbjct: 710 HGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSG-ICSDILDRAMILTAKLLKMGFI 768

Query: 566 VNKVGYNILINFLCKFGCYQQA 587
            N +  N+L++  CK G  ++A
Sbjct: 769 PNVITTNMLLSHFCKQGMPEKA 790



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 243/478 (50%), Gaps = 5/478 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A F  ++ A  + G    A  +   ++  G + +   +N  +    K  E+ +   LY+E
Sbjct: 318 ATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEE 377

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M + G   +  TFN++++   K  ++E++  L   ++ SG++ +   ++++++  C  G 
Sbjct: 378 MRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGR 437

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A+KL +++ +  G ++  + V  N +I  + + G  + A E    M++ G   +  T
Sbjct: 438 LDEAMKLLQEL-LEKGLTL--SVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSST 494

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
             +L+ G  R G  +EA  L   M+++G   N V Y   +   F   ++EGA F+  +M 
Sbjct: 495 CNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMK 554

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ I PD   ++ L  GL + G V++A+++  ++     V + ++YN LI  LC    + 
Sbjct: 555 ERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVT 614

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L   M  +GL+ D  T+  +IDG+C+ G ++ A++ + +M+++   P++  +N +I
Sbjct: 615 EALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILI 674

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            G CK   +  A  ++      GL  D  TYNT ++GY    K+ +A  +  ++ + GI 
Sbjct: 675 GGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIV 734

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
            + V YN +++ +C      +A  L   ++  G IP+ +T   L++ F K   PE+ +
Sbjct: 735 PDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL 791



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 239/500 (47%), Gaps = 4/500 (0%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +V + L+R    +G    A +V++ ++  G    + +    L  L+++ + G  WKL+K+
Sbjct: 178 SVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKD 237

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   +  TFN +I   C++ ++    SL + M K    P+VV FN++IN  C  G 
Sbjct: 238 MIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGR 297

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A+     M V SG  V P+  T   I++  C+ G V  A ++   +   GI  N   
Sbjct: 298 TWVAIDWLHLM-VRSG--VEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAI 354

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY +     +A  L +EM   G+ P+ V +N  +   +  G +E +  +L D+I
Sbjct: 355 YNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLI 414

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              +  D   Y ++   LC  G + +A KL  ++LE+ +     ++N LI    ++    
Sbjct: 415 VSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLED 474

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +    M+  G  P   T  +L+ G C+ G ++ A  +   M +     N V Y  ++
Sbjct: 475 KAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLL 534

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +G  K  +L+ A+ L +  +  G+  DA+ +  LI+G    G + EA+ +F EM  +G  
Sbjct: 535 DGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFV 594

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   YN LI  LC  G   +A +L K M   G++ D  T+  ++  F +    +  IE 
Sbjct: 595 PNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIET 654

Query: 626 HDDMVLSGVSPDNQTYNAII 645
             DM   G+ PD  T+N +I
Sbjct: 655 FLDMQRIGLLPDIFTFNILI 674



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 193/399 (48%), Gaps = 39/399 (9%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +++D +V +    G  + A  ++Q+L  KG ++S+ A+N+ +    +     + ++ Y+ 
Sbjct: 423 SLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRI 482

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG-------------------- 246
           MV CG+  + +T N ++  LC++  L+EA  L YRML+ G                    
Sbjct: 483 MVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNN 542

Query: 247 ---------------IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
                          I+P+ V F  +I+   + G++E A ++F +M   S    +PN+  
Sbjct: 543 LEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEM---SAIGFVPNNFA 599

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I G C  GRV  A ++   M + G+  +  T+  +IDG+ R G  + A+    +M 
Sbjct: 600 YNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQ 659

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + GL+P+   +N  I       D+ GA  +++ M    + PD  TY+    G CR   + 
Sbjct: 660 RIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMN 719

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           QA  + +Q++   +V D  +YN +++ +C S+ L  A  L + ++  G IP++IT   L+
Sbjct: 720 QAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLL 778

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
             +CK G  E A+   + ++++    + + Y  +    C
Sbjct: 779 SHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 187/424 (44%), Gaps = 39/424 (9%)

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EAL +   M   G+ P +    +++    ++GD     KLF+ M +  G    P+++T N
Sbjct: 195 EALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDM-IFKGPR--PSNLTFN 251

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I GFC+  RV   E + + M K     +V T+  LI+    GG +  A+     MV+ 
Sbjct: 252 AMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRS 311

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P+   + + +H                                    LCR G V +A
Sbjct: 312 GVEPSVATFTTILH-----------------------------------ALCREGNVVEA 336

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            KL + + +  +  +A  YN L++   K+  +A A  L   M   G+ PD +T+  L+ G
Sbjct: 337 RKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWG 396

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           + K G IE + ++ +++       +  +Y+ +++ LC    LD A  LLQ     GL L 
Sbjct: 397 HYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLS 456

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            + +N+LI  Y   G   +AF  +  M   G   +    N L+  LC+ G  Q+AR L+ 
Sbjct: 457 VVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLY 516

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            M+  G   + V YT L+  + K  + E    L  +M   G+ PD   + A+I  L    
Sbjct: 517 RMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAG 576

Query: 653 SAED 656
           + E+
Sbjct: 577 NVEE 580


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/578 (26%), Positives = 284/578 (49%), Gaps = 16/578 (2%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
           K+P  AL  +  V     +SH+      + H ++  R FD  L+   +  + NS+ P + 
Sbjct: 21  KNPHSALSIFDSVTRFPGYSHT----PYVFHHILK-RLFDPKLV--AHAYAKNSM-PDQA 72

Query: 132 LEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           L+     +EI    P +  +++L+ A  +    + A       +  G S ++  +N  + 
Sbjct: 73  LDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIK 132

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
              +  +  +  +L   M   G+  +V ++  +I +L K   + +AL L+  M + G+ P
Sbjct: 133 ISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTP 192

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +V C+N++I+   + GD+  A +++ ++  + G SV PN  ++N +ING CK G+ + + 
Sbjct: 193 DVACYNILIDGFFKKGDILNASEIWERL--LKGPSVYPNIPSYNVMINGLCKCGKFDESF 250

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           EI + M K     ++ TY+TLI G    G+ + A R+  EM + G+ P+ VVYN+ ++  
Sbjct: 251 EIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGY 310

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G +E  L  L  +++K  C    +Y+IL +GL  N  V +A  +   + E+    D+
Sbjct: 311 LRAGRIEECL-ELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADS 369

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
            +Y +L++ LCK+  L  A  +L      RG + D   Y ++I+G C+ G ++    V +
Sbjct: 370 MTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAYSSMINGLCREGRLDEVAGVLD 428

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFING 547
            M K   KPN  + N++ING  + + L DA +       +      +TYNTLING     
Sbjct: 429 QMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 488

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           + +EA+A+  EM   G   N + Y++L+N LC+      A  L    +  G  PD   + 
Sbjct: 489 RFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 548

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            ++     +   E+ ++L+ +M      P+  T+N ++
Sbjct: 549 IIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM 586



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 246/525 (46%), Gaps = 17/525 (3%)

Query: 145 TPAVFDALVR----------ACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHLVK 193
           TP VF  +++          A  +    + A D+ Q++ ++ G    I ++N+ L+ L++
Sbjct: 42  TPYVFHHILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIE 101

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
            N+       +    + G   N+ T+N++I   C++ + ++A  L   M   G  P+V  
Sbjct: 102 SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFS 161

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +IN   + G +  ALKLF +M       V P+   +N +I+GF K G +  A EI  
Sbjct: 162 YGTLINSLAKNGYMSDALKLFDEM---PERGVTPDVACYNILIDGFFKKGDILNASEIWE 218

Query: 314 AMIKA-GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
            ++K   +  N+ +Y  +I+G  + G  +E+  +   M K     +   Y++ IH L   
Sbjct: 219 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 278

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G+++GA  V  +M +  + PD   Y+ +  G  R G +++  +L  +V+E+       SY
Sbjct: 279 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVSY 337

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NILI  L ++  +  A  +   +  +    D +TYG L+ G CK G +  A+ + E  + 
Sbjct: 338 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 397

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
                +   Y+S+INGLC++  LD    +L    + G   +    N +ING+    K+ +
Sbjct: 398 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLED 457

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A   F  M + G     V YN LIN L K   + +A  L+K M+  G  P+ +TY+ L+ 
Sbjct: 458 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMN 517

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              +    +  + L    +  G  PD + +N II  L      ED
Sbjct: 518 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 231/495 (46%), Gaps = 22/495 (4%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+      G  +GA  V +++   G S  +  +N  L+  ++   I    +L+K M
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G    V ++N++I  L +  K++EA+S++  + +     + + + ++++  C+ G L
Sbjct: 327 EKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +  +     GD    ++  ++ +ING C+ GR++    +   M K G   N    
Sbjct: 386 NKALSILEEAENGRGDL---DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVC 442

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I+G+ R    E+ALR    MV +G  P  V YN+ I+ L        A  ++ +M+ 
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ 502

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  TYS+L  GLC+   +  A  L  Q LE+    D   +NI+I+ LC S  +  
Sbjct: 503 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A QL S M  R  +P+++T+ TL++G+ K  + E A ++++++ +   +P+++ YN  + 
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622

Query: 508 GLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYF-INGKIAEAFAMFSEMRNVGIA 565
           GLC    + DA   L  A  R  L  AIT+N L+ GY  + G +   F   S   N G+ 
Sbjct: 623 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASMKGNPGMQ 682

Query: 566 VNKVGY---------NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           +   G+         ++    LC F   +  R+     +   II ++  Y   V      
Sbjct: 683 MRYFGFVCDKLSSPLDVQQPVLCLFLVSETLRKSFPNFMC--IIAEWYVYLPAVVH---- 736

Query: 617 CSPEEVIELHDDMVL 631
            SP      H D +L
Sbjct: 737 -SPSRSQRYHQDQIL 750



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 130/259 (50%), Gaps = 5/259 (1%)

Query: 129 LEFLEGLLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L+ + G+LD  +   CK  P V +A++    +    E A      +  KG   ++  +N 
Sbjct: 420 LDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 479

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            ++ L K       + L KEM+  G+  N+ T++L++  LC+  KL+ AL+L+ + L+ G
Sbjct: 480 LINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 539

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P+V   N+II+  C  G +E AL+L+ +   M   + +PN VTHN ++ GF K+   E
Sbjct: 540 FKPDVKMHNIIIHGLCSSGKVEDALQLYSE---MKQRNCVPNLVTHNTLMEGFYKVRDFE 596

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A +I   +++ G+  ++ +Y   + G        +A+   ++ V RG++P  + +N  +
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656

Query: 367 HWLFAEGDVEGALFVLSDM 385
               A       +FV + M
Sbjct: 657 QGYLALKGYMEPVFVPASM 675


>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           javanica]
          Length = 431

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 220/434 (50%), Gaps = 6/434 (1%)

Query: 78  LEFYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEG 134
             F+TW+    N+ F H+L S C ++H L   + F +A  L+  ++S     S       
Sbjct: 1   FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60

Query: 135 LLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
           +L++    ++   VF  L+ A  + G    A +  +  +     V        L HL+KL
Sbjct: 61  ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P V  +
Sbjct: 121 RYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSY 180

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   ++G L+     FR    M    V P+  T++ +ING  K   ++   E+   
Sbjct: 181 NTLMNGYIRLGXLDEG---FRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDE 237

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+  + L  +GD
Sbjct: 238 MLXKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGD 297

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +  A  ++ +M  K + PD FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  
Sbjct: 298 LNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTA 357

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+ LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    +  + M++  
Sbjct: 358 LISGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNG 417

Query: 495 KKPNLVIYNSIING 508
             P +V YN ++NG
Sbjct: 418 HVPXVVTYNVLMNG 431



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 153/300 (51%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRL 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +    +  D Y+Y++LIN L K + +    +L   M+ +GL+P+ +T+
Sbjct: 191 GXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTF 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+ + YN++  GLCK   L+ A  L+     
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSM 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXD 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +   +M  +G  P   TYN +++
Sbjct: 371 AEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMN 430



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P + +Y TL
Sbjct: 124 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTL 183

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G ++   ++   M     +P++  Y+ +INGL K++ +D    L       GL
Sbjct: 184 MNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGL 243

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + +++T+ TLI+G+  NG++  A  ++ +M +  +  + + YN L   LCK G   QA  
Sbjct: 244 VPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHG 303

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 304 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLC 363

Query: 650 GEKSAED 656
            E  + D
Sbjct: 364 QEGRSXD 370



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 1/255 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFY 130

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P +  YN+++NG  + 
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRL 190

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING      + +   +F EM   G+  N V +
Sbjct: 191 GXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTF 250

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   + PD++TY TL     K     +   L D+M +
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSM 310

Query: 632 SGVSPDNQTYNAIIS 646
            G+ PD  TY  +I 
Sbjct: 311 KGLKPDKFTYTTLID 325


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/383 (34%), Positives = 198/383 (51%), Gaps = 4/383 (1%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++ Y EM+  G   N  T+  +I  LC   K  E   L   M++ G+  +V  F ++I+ 
Sbjct: 205 FEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDG 264

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G L  A ++F +M V  G    PN VT   ++ G+C  G V+ A E+  A+ + G 
Sbjct: 265 LCKNGMLVEAREMFDEM-VNRGYE--PNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V TY   I GY + G   +A+R+ DEM + G++PN V YNS I  L   G+V GA  
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           ++  M    + PD  T  IL  GLC++  + QA  L NQ++E  +  D +SY ILI+  C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
            S  +  A  LL  M ++ L+P I+TY  LIDG C+ G I  A ++   M      P+ +
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y+ +++ L K   LD A  L     + GL  D + Y  +I+GY  + +I EA  +F EM
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 560 RNVGIAVNKVGYNILINFLCKFG 582
               +  + V Y IL N + K G
Sbjct: 562 HMKNLVPDIVTYTILFNAVFKSG 584



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 258/506 (50%), Gaps = 14/506 (2%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
            +G    ++ +  K+  +G+ +   A N  L  L     + +  + + E+V+ G+  N  
Sbjct: 84  HLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEV 143

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSG---------IWPNVVCFNMIINEACQVGDLE 268
           ++ ++I  LC+  ++ EA++L  RM++           +  NVV ++++I+  C+ G ++
Sbjct: 144 SYGILINGLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVD 202

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
              + + +M    G+ V PN  T+  +I G C +G+      +   MI+ G+D +V  + 
Sbjct: 203 EGFEFYNEM---MGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LIDG  + G   EA  + DEMV RG  PN V   + +     +G+V+ A  +   + + 
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D +TY++   G C+ G V+ A ++ +++  E +V +  +YN LI+ LCK+  ++ A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +++ +M   GL PDI+T   L+DG CK   ++ A+ ++  + +    P++  Y  +I+G
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C    +  A +LL+      L+  I TY+ LI+G   +G+I+ A+ + +EM   G   +
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+IL++ L K     +A  L   MI  G+ PD + YT ++  + K+   +E I L  
Sbjct: 500 TITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFR 559

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKS 653
           +M +  + PD  TY  + + +    S
Sbjct: 560 EMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 202/396 (51%), Gaps = 19/396 (4%)

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           N M  N V P EF  G                +L+R    +G     + ++ ++  +G  
Sbjct: 209 NEMMGNGVCPNEFTYG----------------SLIRGLCGVGKFLEGFGLVDEMIRRGLD 252

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           VS++ +   +  L K   +    +++ EMV+ GY  N+ T   ++   C +  ++ A  L
Sbjct: 253 VSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           +  + + G   +V  +N+ I+  C+VG +  A+++F +M     + V+PN VT+N +I+ 
Sbjct: 313 FDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEM---CREGVVPNIVTYNSLIDC 369

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK G V  A EI   M ++G+  ++ T   L+DG  +    ++A+ L +++V+ GL P+
Sbjct: 370 LCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPD 429

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
              Y   IH       +  A+ +L DM  K++ P   TYS L  GLCR+G +  A++L N
Sbjct: 430 VWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLN 489

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++  +  + D  +Y+IL++ L K  +L  A  L + MI RGL PD++ Y  +IDGYCK  
Sbjct: 490 EMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
            I+ A+ ++  M      P++V Y  + N + K  S
Sbjct: 550 RIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 213/438 (48%), Gaps = 22/438 (5%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           + S++ ++LK G   + V  N ++   C  G +  AL+ F    V +G S+  N V++  
Sbjct: 91  SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALE-FHDEIVNNGFSL--NEVSYGI 147

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAG--------IDCNVRTYATLIDGYARGGSSEEALRL 346
           +ING C+ GRV  A  +   + K          +  NV  Y+ +ID   R G  +E    
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            +EM+  G+ PN   Y S I  L   G       ++ +MI + +    + +++L  GLC+
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNI-----LINYLCKSNNLAAAKQLLSSMIVRGLI 461
           NG + +A ++ ++     MV   Y  NI     L+   C   N+  A++L  ++   G  
Sbjct: 268 NGMLVEAREMFDE-----MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFK 322

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
            D+ TY   I GYCK G +  AV+V++ M +    PN+V YNS+I+ LCK   +  A  +
Sbjct: 323 RDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEI 382

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           ++   R GL  D +T   L++G   + ++ +A  +F+++   G+  +   Y ILI+  C 
Sbjct: 383 VKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCT 442

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
                +A  L++ M L  ++P  VTY+ L+    ++        L ++M + G  PD  T
Sbjct: 443 SRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTIT 502

Query: 641 YNAIISPLLGEKSAEDQV 658
           Y+ ++  L  ++  ++ V
Sbjct: 503 YSILLDALWKKQHLDEAV 520



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 191/370 (51%), Gaps = 7/370 (1%)

Query: 197 IGRF---WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           +G+F   + L  EM+  G   +V  F ++I  LCK   L EA  ++  M+  G  PN+V 
Sbjct: 233 VGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVT 292

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
              ++   C  G+++ A +LF  +G         +  T+N  I+G+CK+GRV  A  +  
Sbjct: 293 CTALMGGYCLKGNVDMARELFDAIGEWGFKR---DVWTYNVFIHGYCKVGRVRDAVRVFD 349

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M + G+  N+ TY +LID   + G    A  +   M + GL P+ V     +  L    
Sbjct: 350 EMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSK 409

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A+ + + +++  + PD ++Y+IL  G C +  + +A  L   +  +++V    +Y+
Sbjct: 410 RLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYS 469

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI+ LC+S  ++ A +LL+ M V+G +PD ITY  L+D   K  +++ AV ++  M K 
Sbjct: 470 CLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKR 529

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
             +P+++ Y  +I+G CK   +D A +L +      L+ D +TY  L N  F +G  +  
Sbjct: 530 GLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYE 589

Query: 553 FAMFSEMRNV 562
           +   + +R++
Sbjct: 590 WKFVNVIRDI 599



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 15/292 (5%)

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
            F  G V  +  +   ++ +    D    + + KGLC NG V +A + H++++      +
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 429 AYSYNILINYLCKSNNLAAAKQLL-----------SSMIVRGLIPDIITYGTLIDGYCKG 477
             SY ILIN LC++  +  A  LL               V+G   +++ Y  +ID  C+ 
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRN 198

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G ++   + Y  M      PN   Y S+I GLC          L+    R GL +    +
Sbjct: 199 GFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVF 258

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             LI+G   NG + EA  MF EM N G   N V    L+   C  G    AREL   +  
Sbjct: 259 TVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGE 318

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            G   D  TY   +  + K     + + + D+M   GV P+  TYN++I  L
Sbjct: 319 WGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCL 370


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 244/499 (48%), Gaps = 6/499 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+RA    G    A  V   +  +G S S+  ++  L    K +   +   L  EM
Sbjct: 253 TFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEM 312

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G   ++ T+N++I A+C E  ++EAL++   +   G  P+ V +  ++   C     
Sbjct: 313 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERW 372

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +   +L  +M   + ++  P+ VT N I+   C+ G V+ A E+   M + G   ++ TY
Sbjct: 373 KEVEELLAEM---TSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTY 429

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           ++++DG    G  ++A+ L   +   G  P+ + Y + +  L +    E A  ++++M+ 
Sbjct: 430 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLC 489

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  T++ +   LC+ G V +A ++  Q+ E     D  +YN +I+ LC  + +  
Sbjct: 490 SDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LLS +   G  PDI+T+ TL+ G C     E A Q+  NM +    P+ + +N++I 
Sbjct: 550 AMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVIT 609

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LC+   L  A   L+     G + ++ TY+ +++     GK   A  + S M N     
Sbjct: 610 SLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TP 667

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + + YN +I+ L K G  ++A +L++VM+ +G+ PD  TY +L     +    +  + + 
Sbjct: 668 DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRML 727

Query: 627 DDMVLSGVSPDNQTYNAII 645
             +  +G+SPD   YN ++
Sbjct: 728 RRVQDTGLSPDTTFYNDVL 746



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 225/464 (48%), Gaps = 12/464 (2%)

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCG--YVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           L  LV+  EI     L+  M S G      V   N++I  LC + ++ +A  ++  +  S
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
                VV +N ++N  C+ G +E A +L   M         P++ T N +I   C  GR+
Sbjct: 217 A---TVVTYNTMVNGYCRAGRIEDARRLINGM------PFPPDTFTFNPLIRALCVRGRI 267

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +   M+  G   +V TY+ L+D   +     +A+ L DEM  +G  P+ V YN  
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I+ +  EGDV+ AL +LS++      PD  TY+ + K LC +   K+  +L  ++   + 
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  ++N ++  LC+   +  A +++  M   G + DI+TY +++DG C  G ++ AV+
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYF 544
           +   +K    KP+ + Y +++ GLC     + A+ L+ +        D +T+NT++    
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G +  A  +  +M   G + + V YN +I+ LC   C   A EL+  +   G  PD V
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIV 567

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           T+ TL+         E+  +L  +M+ S   PD  T+N +I+ L
Sbjct: 568 TFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSL 611



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 8/395 (2%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q G+++ AL LF  M    G +  P  V  N +I   C  GRV  AE +  A+   G   
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNC-PPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSA 217

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V TY T+++GY R G  E+A RL + M      P+   +N  I  L   G +  AL V 
Sbjct: 218 TVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVF 274

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM+ +   P   TYSIL    C+    +QA  L +++  +    D  +YN+LIN +C  
Sbjct: 275 DDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNE 334

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++  A  +LS++   G  PD +TY  ++   C     +   ++   M      P+ V +
Sbjct: 335 GDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTF 394

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N+I+  LC+   +D A  ++      G + D +TY+++++G    G++ +A  + S +++
Sbjct: 395 NTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKS 454

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   + + Y  ++  LC    +++A ELM  M+     PD VT+ T+V    +    + 
Sbjct: 455 YGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDR 514

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            I + + M  +G SPD  TYN II  L  E   +D
Sbjct: 515 AIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDD 549



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 208/437 (47%), Gaps = 12/437 (2%)

Query: 223 IYALCKECKLEEALSLYYRMLKSGI--WPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           + +L +  +++EAL L+  M   G    P VV  N++I   C  G +  A ++F  +G  
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +        VT+N ++NG+C+ GR+E A  +   M       +  T+  LI      G  
Sbjct: 217 A------TVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRI 267

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
            +AL + D+M+ RG  P+ V Y+  +     E     A+ +L +M  K   PD  TY++L
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
              +C  G V +A  + + +       DA +Y  ++  LC S      ++LL+ M     
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD +T+ T++   C+ G ++ A++V ++M +     ++V Y+SI++GLC    +D A  
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           LL   +  G   D I Y T++ G     +   A  + +EM       ++V +N ++  LC
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLC 507

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           + G   +A  +++ M  +G  PD VTY  ++         ++ +EL  D+   G  PD  
Sbjct: 508 QKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIV 567

Query: 640 TYNAIISPLLGEKSAED 656
           T+N ++  L G    ED
Sbjct: 568 TFNTLLKGLCGVDRWED 584



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 195/429 (45%), Gaps = 6/429 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ +V +  Q G  + A +V+  +   G    I  +++ L  L  +  +    
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L   + S G   +   +  V+  LC   + E A  L   ML S   P+ V FN ++   
Sbjct: 447 ELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASL 506

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G ++ A+++  +M   S +   P+ VT+NCII+G C    ++ A E+   +   G  
Sbjct: 507 CQKGLVDRAIRVVEQM---SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCK 563

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ T+ TL+ G       E+A +L   M++    P+ + +N+ I  L  +G +  A+  
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIET 623

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M +    P+  TYSI+   L + G  + A +L + +   +   D  +YN +I+ L K
Sbjct: 624 LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTK 681

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +  A  LL  M+  GL PD  TY +L  G C+    + AV++   ++     P+   
Sbjct: 682 AGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTF 741

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN ++ G C+D   D A          G + D  TY  L+      G + EA  + + + 
Sbjct: 742 YNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLC 801

Query: 561 NVGIAVNKV 569
           ++G+   K+
Sbjct: 802 SLGVLDKKL 810



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 209/454 (46%), Gaps = 36/454 (7%)

Query: 35  VFRAICVNLRQRKWKILEQMAPSLTNS-------LVNRVVSEFRKSPKL--ALEFYTWVG 85
           V +++C + R   WK +E++   +T++         N +V+   +   +  A+E    + 
Sbjct: 362 VLKSLCGSER---WKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS 418

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYE- 140
           E+   +  +  S +I+  L +  R DDA+ L+  L S     ++++    L+GL  + + 
Sbjct: 419 EHGCVADIVTYS-SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQW 477

Query: 141 ----------ICKATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
                     +C   P     F+ +V +  Q G  + A  V++++   G S  I  +N  
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +  L   + I    +L  ++ SCG   ++ TFN ++  LC   + E+A  L   M++S  
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNC 597

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+ + FN +I   CQ G L  A++  +   +M+ +  +PNS T++ +++   K G+ + 
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLK---IMAENGCVPNSSTYSIVVDALLKAGKAQA 654

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A E+   M     D  + TY T+I    + G  EEAL L   MV  GL P+   Y S  +
Sbjct: 655 ALELLSGMTNGTPD--LITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAY 712

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            +  E   + A+ +L  + D  + PD   Y+ +  G CR+     A      ++    + 
Sbjct: 713 GVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMP 772

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           D  +Y IL+  L     L  AK+LL+S+   G++
Sbjct: 773 DESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 9/296 (3%)

Query: 366 IHWLFAEGDVEGALFVLSDMIDK--HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           +  L   G+++ AL +   M       CP     +IL K LC +G V  A ++   +   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
             V    +YN ++N  C++  +  A++L++ M      PD  T+  LI   C  G I  A
Sbjct: 217 ATV---VTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDA 270

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
           + V+++M      P++V Y+ +++  CK++    A +LL   +  G   D +TYN LIN 
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G + EA  + S + + G   + V Y  ++  LC    +++  EL+  M  +   PD
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            VT+ T+VT   +    +  IE+ D M   G   D  TY++I+  L      +D V
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 23/224 (10%)

Query: 447 AAKQLLSSMIVRGLI------------------PDIITYGTLIDGYCKGGNIEGAVQVYE 488
            AK+ L S++ RG I                  P ++    LI   C  G +  A +V+ 
Sbjct: 152 GAKRRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFA 211

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGK 548
            +        +V YN+++NG C+   ++ A+ L+         D  T+N LI    + G+
Sbjct: 212 ALGP---SATVVTYNTMVNGYCRAGRIEDARRLINGMPFPP--DTFTFNPLIRALCVRGR 266

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I +A A+F +M + G + + V Y+IL++  CK   Y+QA  L+  M   G  PD VTY  
Sbjct: 267 IPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNV 326

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           L+         +E + +  ++   G  PD  TY  ++  L G +
Sbjct: 327 LINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSE 370



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 22/253 (8%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R++DA  LM N+M +N                 C      F+ ++ +  Q G    A + 
Sbjct: 581 RWEDAEQLMANMMRSN-----------------CPPDELTFNTVITSLCQKGLLTQAIET 623

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           ++ +   G   +   ++  +  L+K  +     +L   M +     ++ T+N VI  L K
Sbjct: 624 LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTN--GTPDLITYNTVISNLTK 681

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             K+EEAL L   M+ +G+ P+   +  +    C+    + A+++ R++       + P+
Sbjct: 682 AGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRV---QDTGLSPD 738

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           +  +N ++ GFC+  R + A +    M+ +G   +  TY  L++  A GG  +EA RL  
Sbjct: 739 TTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLA 798

Query: 349 EMVKRGLMPNNVV 361
            +   G++   ++
Sbjct: 799 SLCSLGVLDKKLI 811


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 263/527 (49%), Gaps = 8/527 (1%)

Query: 135 LLDSYEICKATPA--VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +L   EI    P+   + AL+    ++     A D++  LK +G +++       +    
Sbjct: 316 VLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFC 375

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           ++ EI +  ++ K M+  G   +V T++ +I  +C+  K+ E   +  RM KSGI PN V
Sbjct: 376 QVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 435

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I   C+ G ++ ALK F  +       ++ N V HN ++  F + G +  AE  R
Sbjct: 436 LYTTLICYYCKAGYVKVALKHFVDI---YRRGLVANPVIHNALLRAFYREGMITEAEHFR 492

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +  I  N  ++  +ID Y   G   EA  + D+MV+ G  PN   Y + +  L   
Sbjct: 493 QYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQG 552

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G +  A   +  ++D     D  T++ L  G+C+ G + +A  +  ++++ + + D ++Y
Sbjct: 553 GHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTY 612

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            IL++  C+   +  A  +L  M+ +G++PD + Y  L++G    G ++ A  V++ +  
Sbjct: 613 TILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIIC 672

Query: 493 VEK-KPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIA 550
            E    + + YNS++NG  K  +++  K ++    Q     ++ +YN L++GY   G+ +
Sbjct: 673 KEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFS 732

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           ++  ++  M   GI  + V Y +LI  L + G    A + ++ M+L GI PD + +  L+
Sbjct: 733 KSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILI 792

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           T FS+       + L + M    +SP ++T++A+I+ L+  K+  DQ
Sbjct: 793 TSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLI-RKNYLDQ 838



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 236/511 (46%), Gaps = 41/511 (8%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           S+  +   +    +   I +   +  EM   G + +  T++ ++   CK   L  AL L 
Sbjct: 293 SVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLM 352

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +   GI  N     ++I+  CQVG++  A ++ + M     D + P+ VT++ +ING 
Sbjct: 353 VDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSM---LEDGIDPDVVTYSALINGM 409

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C++ ++   +EI   M K+GI  N   Y TLI  Y + G  + AL+   ++ +RGL+ N 
Sbjct: 410 CRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANP 469

Query: 360 VVYNSTIHWLFAEG-----------------------------------DVEGALFVLSD 384
           V++N+ +   + EG                                    +  A  V  D
Sbjct: 470 VIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDD 529

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+     P+  TY  L +GLC+ G + QA +    +L+     D  ++N L+  +CK   
Sbjct: 530 MVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGT 589

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A  +   M+    +PDI TY  L+ G+C+ G I  A+ + + M +    P+ V Y  
Sbjct: 590 LDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTC 649

Query: 505 IINGLCKDASLDAAKSLLQASQ-RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++NGL  +  + AA  + Q    + GL  D I YN+L+NGY   G +     M S+M   
Sbjct: 650 LLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQN 709

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            +  N   YNIL++   K G + ++  L K M+  GI PD VTY  L+   S+    +  
Sbjct: 710 EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIA 769

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           ++  + MVL G+ PD   ++ +I+    EKS
Sbjct: 770 VKFLEKMVLEGIFPDKLVFDILITS-FSEKS 799



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 243/495 (49%), Gaps = 5/495 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ ++ +    G    A+ V   +   GHS ++  + N L  L +   + +  +    ++
Sbjct: 507 FNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLL 566

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 +  TFN ++  +CK   L+EAL +  +M+K+   P++  + ++++  C+ G + 
Sbjct: 567 DIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKIL 626

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTY 327
            AL + +   +M    V+P++V + C++NG    G+V+ A  +   +I K G+  +   Y
Sbjct: 627 PALVMLQ---MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAY 683

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +L++GY +GG+     R+  +M +  + PN+  YN  +H     G    +L++   M+ 
Sbjct: 684 NSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR 743

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD+ TY +L  GL   G +  A K   +++ E +  D   ++ILI    + + +  
Sbjct: 744 KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHN 803

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L + M    L P   T+  +I+G  +   ++ + +V   M +V  +PN   Y +++N
Sbjct: 804 ALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVN 863

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             C+   +D A  L +  + IG++ A +  +++I G    GK+ EA  +FS M   G+  
Sbjct: 864 AKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVP 923

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               +  L++ LCK      A  L ++M L  +  D V+Y  L+T   K+    + ++L+
Sbjct: 924 TVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLY 983

Query: 627 DDMVLSGVSPDNQTY 641
            +M   G+ P+  TY
Sbjct: 984 GEMKSKGLWPNVTTY 998



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 249/517 (48%), Gaps = 5/517 (0%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A P + +AL+RA  + G    A    Q +     S +  ++N  +       +I   + +
Sbjct: 467 ANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSV 526

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y +MV  G+  NV T+  ++  LC+   L +A    + +L      +   FN ++   C+
Sbjct: 527 YDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICK 586

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G L+ AL +  KM     ++ LP+  T+  +++GFC+ G++  A  +   M++ G+  +
Sbjct: 587 YGTLDEALDICEKM---VKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPD 643

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMV-KRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
              Y  L++G    G  + A  +  E++ K GL  + + YNS ++     G+V     ++
Sbjct: 644 TVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMM 703

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           SDM    + P+  +Y+IL  G  + G   ++  L+  ++ + +  D  +Y +LI  L + 
Sbjct: 704 SDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC 763

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A + L  M++ G+ PD + +  LI  + +   +  A++++  MK +   P+   +
Sbjct: 764 GLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTF 823

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRN 561
           +++INGL +   LD +  +L    ++GL    T Y  L+N     G+I  AF +  EM+ 
Sbjct: 824 SAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKA 883

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           +GI   +V  + +I  LC+ G  ++A  +   M+  G++P   T+TTL+    K     +
Sbjct: 884 IGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIAD 943

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            + L   M L  +  D  +YN +I+ L  +K   D +
Sbjct: 944 ALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDAL 980



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 214/444 (48%), Gaps = 7/444 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVG 265
           M  CG+  +    N ++ AL +E +  + + L+ R   +  +P +V   N+++N  C  G
Sbjct: 111 MDDCGFKASPVACNSILKALVEEGE-SKYVWLFLRESLARKFPLDVTTCNILLNSLCTNG 169

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           +   A  + +KM        L NS T+N I++ + K GR + A  +   M +  I  ++ 
Sbjct: 170 EFRKAEDMLQKMK----SCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIY 225

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  +ID   R   S  A  L   M K  L P+   YN+ I+  F EG +  A  V + M
Sbjct: 226 TYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHM 285

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           + + + P   TY+ +  G CRN  + +A  + +++    ++    +Y+ L+N  CK + L
Sbjct: 286 LRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSML 345

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L+  +  RG+  +      LIDG+C+ G I  A Q+ ++M +    P++V Y+++
Sbjct: 346 GPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSAL 405

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ING+C+ A +   K +L   Q+ G+L + + Y TLI  Y   G +  A   F ++   G+
Sbjct: 406 INGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGL 465

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N V +N L+    + G   +A    + M    I  + V++  ++  +       E   
Sbjct: 466 VANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFS 525

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
           ++DDMV  G SP+  TY  ++  L
Sbjct: 526 VYDDMVRYGHSPNVCTYQNLLRGL 549



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/541 (22%), Positives = 245/541 (45%), Gaps = 40/541 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C +  A ++ ++    + G  + A  V++ ++       I+ +N  +  L ++    R +
Sbjct: 185 CLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAF 244

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L K M       +  T+N +I     E K+  A  ++  ML+  + P+V  +  +I+  
Sbjct: 245 LLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGY 304

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN------------------------ 297
           C+   ++ AL +  +M +     V+P+ +T++ ++N                        
Sbjct: 305 CRNRRIDKALSVLSEMEI---TGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGIT 361

Query: 298 -----------GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
                      GFC++G +  A++I  +M++ GID +V TY+ LI+G  R     E   +
Sbjct: 362 INKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEI 421

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M K G++PN+V+Y + I +    G V+ AL    D+  + +  +   ++ L +   R
Sbjct: 422 LSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYR 481

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G + +A      +   ++  ++ S+N +I+  C    +  A  +   M+  G  P++ T
Sbjct: 482 EGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCT 541

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  L+ G C+GG++  A Q    +  +    +   +N+++ G+CK  +LD A  + +   
Sbjct: 542 YQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMV 601

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +   L D  TY  L++G+   GKI  A  M   M   G+  + V Y  L+N L   G  +
Sbjct: 602 KNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVK 661

Query: 586 QARELMKVMIL-HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            A  + + +I   G+  D + Y +L+  + K  +   +  +  DM  + V P++ +YN +
Sbjct: 662 AASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNIL 721

Query: 645 I 645
           +
Sbjct: 722 M 722



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 222/460 (48%), Gaps = 3/460 (0%)

Query: 178  SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
            +V    +N  L  + K   +     + ++MV    + +++T+ +++   C++ K+  AL 
Sbjct: 571  AVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALV 630

Query: 238  LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
            +   ML+ G+ P+ V +  ++N     G ++ A  +F++  ++  + +  + + +N ++N
Sbjct: 631  MLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQE--IICKEGLYADCIAYNSLMN 688

Query: 298  GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
            G+ K G V   + +   M +  +  N  +Y  L+ GY + G   ++L L   MV++G+ P
Sbjct: 689  GYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRP 748

Query: 358  NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
            +NV Y   I  L   G ++ A+  L  M+ + I PD   + IL         +  A +L 
Sbjct: 749  DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLF 808

Query: 418  NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            N +   H+   + +++ +IN L + N L  + ++L  M+  GL P+   Y  L++  C+ 
Sbjct: 809  NCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRV 868

Query: 478  GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TY 536
            G I+ A ++ E MK +   P  V  +SII GLC+   L+ A  +     R G++  + T+
Sbjct: 869  GEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATF 928

Query: 537  NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             TL++      KIA+A  +   M    + V+ V YN+LI  LCK      A +L   M  
Sbjct: 929  TTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKS 988

Query: 597  HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             G+ P+  TY TL          +   EL +D+   G+ P
Sbjct: 989  KGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 239/501 (47%), Gaps = 7/501 (1%)

Query: 115  LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
            LL G     + V   +F+  LLD           F+AL+    + G  + A D+ +K+  
Sbjct: 545  LLRGLCQGGHLVQAKQFMFCLLDIPS--AVDEKTFNALLLGICKYGTLDEALDICEKMVK 602

Query: 175  KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
                  IH +   LS   +  +I     + + M+  G V +   +  ++  L  E +++ 
Sbjct: 603  NNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKA 662

Query: 235  ALSLYYRML-KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            A  ++  ++ K G++ + + +N ++N   + G++     + R M  M  + V PNS ++N
Sbjct: 663  ASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVN---TIKRMMSDMYQNEVYPNSASYN 719

Query: 294  CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
             +++G+ K G+   +  +   M++ GI  +  TY  LI G +  G  + A++  ++MV  
Sbjct: 720  ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLE 779

Query: 354  GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
            G+ P+ +V++  I     +  +  AL + + M   H+ P   T+S +  GL R   + Q+
Sbjct: 780  GIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQS 839

Query: 414  FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             ++ +++L+  +  +   Y  L+N  C+   +  A +L   M   G++P  +   ++I G
Sbjct: 840  HEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRG 899

Query: 474  YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
             C+ G +E AV V+ NM +    P +  + ++++ LCK++ +  A  L +  +   L +D
Sbjct: 900  LCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVD 959

Query: 533  AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             ++YN LI G   +  I++A  ++ EM++ G+  N   Y  L   +   G  Q   EL++
Sbjct: 960  VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLE 1019

Query: 593  VMILHGIIPDYVTYTTLVTRF 613
             +   G+IP +     L  R 
Sbjct: 1020 DIEERGLIPAFKQLENLERRM 1040



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 4/304 (1%)

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N+VV+   I     E  V  A   +  M D          + + K L   G  K  +   
Sbjct: 84  NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFL 143

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            + L      D  + NIL+N LC +     A+ +L  M     + +  TY T++  Y K 
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCCLSNSATYNTILHWYVKK 202

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
           G  + A+ V E+M++   + ++  YN +I+ LC+      A  LL+  ++  L  D  TY
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTLING+F  GKI  A  +F+ M    +  +   Y  +I+  C+     +A  ++  M +
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI 322

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL--LGEKSA 654
            G++P  +TY+ L+  + K       ++L  D+   G++ +      +I     +GE S 
Sbjct: 323 TGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISK 382

Query: 655 EDQV 658
             Q+
Sbjct: 383 AKQI 386


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 229/459 (49%), Gaps = 4/459 (0%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           N++   + ++  M   G   N  ++  +I+ LC+  +++E ++++ +M +   +P V  +
Sbjct: 18  NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            +I++   + G    A+ LF +M     +   PN  T+  +IN  CK  ++E    I   
Sbjct: 78  TVIVHALFESGRRMEAINLFSEMRERGCE---PNIHTYTVMINAMCKETKLEEGRRILDE 134

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M++ G+  +V TY  LIDGY + G  E A  + D M      PN   YN  I     + +
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V  A+ +LS M++  + P   TY+ L  G C+ G +  A++L N + E  +V D ++Y++
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
            I+ LCK   +  A  L +S+  +G+  + + Y  LIDGYCK G ++ A  + + M   +
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAF 553
             PN   YN++I+GLCK+  +  A  L+++  + GL   + TY  LI      G    A 
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  +M + G   +   Y   I+  C  G  ++A ++M +M   G++PD +TYT ++  +
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
                     ++   M  +G  P + TY+ +I  LL E+
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEE 473



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 242/511 (47%), Gaps = 33/511 (6%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+ V   +  KG   +  ++ N +  L ++  +     ++K+M        V T+ ++++
Sbjct: 23  AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVH 82

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           AL +  +  EA++L+  M + G  PN+  + ++IN  C+   LE   ++  +M V  G  
Sbjct: 83  ALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM-VEKG-- 139

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           ++P+  T+N +I+G+CK G VE A+EI   M     + N RTY  LI G+ R  +   A+
Sbjct: 140 LVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAM 199

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  +M++  L P+ V YNS IH     G ++ A  +L+ M +  + PD +TYS+    L
Sbjct: 200 ALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTL 259

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G +++A  L N + E+ +  +   Y  LI+  CK+  +  A  LL  M+    +P+ 
Sbjct: 260 CKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNS 319

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            TY  LIDG CK   ++ A+ + E+M +   K  +  Y  +I  + K+   D A  +L  
Sbjct: 320 STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G   D   Y   I+ +   G I EA  M S M   G+  + + Y ++I+     G 
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLV--------TRFSKNCS-----P----------- 619
              A +++K M   G  P + TY+ L+        T+  KN +     P           
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVW 499

Query: 620 -----EEVIELHDDMVLSGVSPDNQTYNAII 645
                E  +EL + M+  G SP+  TY  +I
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLI 530



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 254/580 (43%), Gaps = 82/580 (14%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   +  +V A  + G    A ++  +++ +G   +IH +   ++ + K  ++    
Sbjct: 70  CYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGR 129

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLE---------------------------- 233
           ++  EMV  G V +V T+N +I   CKE  +E                            
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGF 189

Query: 234 -------EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
                   A++L  +ML+S + P+VV +N +I+  C++G L+ A   +R + +M+ + V+
Sbjct: 190 CRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSA---YRLLNLMNENGVV 246

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+  T++  I+  CK GR+E A  +  ++ + GI  N   Y  LIDGY + G  ++A  L
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSL 306

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D M+    +PN+  YN+ I  L  E  V+ AL ++  MI K +     TY+IL   + +
Sbjct: 307 LDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLK 366

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G    A ++ +Q++      D Y Y   I+  C   N+  A+ ++S M  RG++PD +T
Sbjct: 367 EGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALT 426

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  +ID Y   G +  A  V + M      P+   Y+ +I  L K+        L +  +
Sbjct: 427 YTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE-------ELTKKYK 479

Query: 527 RIGLLDAI-------------------------------------TYNTLINGYFINGKI 549
            + L D+I                                     TY  LI G    G++
Sbjct: 480 NVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             A  +F  M   G++ ++  YN L+N  C+ G Y  A  L+  M+ HG +P   +   L
Sbjct: 540 GVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVL 599

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
                +  S E+   +  +++  G + D   +  +I  LL
Sbjct: 600 FCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLL 639



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 229/499 (45%), Gaps = 33/499 (6%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    +      A  ++ K+     + S+  +N+ +    K+  +   +
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L   M   G V +  T+++ I  LCK+ ++EEA  L+  + + GI  N V +  +I+  
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G ++ A  L  +M     +  LPNS T+N +I+G CK  +V+ A  +  +MI+ G+ 
Sbjct: 295 CKAGKMDDANSLLDRMLT---EDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLK 351

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
           C V TY  LI    + G  + A R+ D+MV  G  P+  +Y + IH     G+++ A  +
Sbjct: 352 CTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDM 411

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +S M ++ + PD  TY+++       G +  AF +  ++ +       ++Y+ LI +L K
Sbjct: 412 MSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK 471

Query: 442 S------NNLA-----------------------AAKQLLSSMIVRGLIPDIITYGTLID 472
                   N+A                        A +L   M+  G  P+I TY  LI 
Sbjct: 472 EELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLII 531

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G +  A +++++M +    P+  IYNS++N  C+      A  L+ A    G L 
Sbjct: 532 GLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLP 591

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
            + + N L  G +  G   +A  +FS +   G   ++V + ILI+ L K G      EL+
Sbjct: 592 LLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELL 651

Query: 592 KVMILHGIIPDYVTYTTLV 610
            VM   G      TY  L+
Sbjct: 652 GVMEARGCQIHPQTYRMLI 670



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 27/365 (7%)

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++NG+CKLG           +++A ++ +V +                A  + + M K+G
Sbjct: 1   MVNGYCKLGN----------LVEANLNNDVNS----------------AFSVFNMMPKKG 34

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
              N V Y + IH L   G V+  + +   M +    P   TY+++   L  +G   +A 
Sbjct: 35  CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAI 94

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L +++ E     + ++Y ++IN +CK   L   +++L  M+ +GL+P + TY  LIDGY
Sbjct: 95  NLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGY 154

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
           CK G +E A ++ + M      PN   YN +I G C+  ++  A +LL       L  ++
Sbjct: 155 CKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSV 214

Query: 535 -TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TYN+LI+G    G +  A+ + + M   G+  ++  Y++ I+ LCK G  ++A  L   
Sbjct: 215 VTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNS 274

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           +   GI  + V YT L+  + K    ++   L D M+     P++ TYNA+I  L  E+ 
Sbjct: 275 LKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK 334

Query: 654 AEDQV 658
            ++ +
Sbjct: 335 VQEAL 339



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 208/486 (42%), Gaps = 52/486 (10%)

Query: 88  NRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPA 147
           +R + S+ +  +++H        D A  L+ NLM+ N V P ++             T +
Sbjct: 208 SRLTPSVVTYNSLIHGQCKIGYLDSAYRLL-NLMNENGVVPDQW-------------TYS 253

Query: 148 VF-DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           VF D L +     G  E A  +   LK KG   +   +   +    K  ++     L   
Sbjct: 254 VFIDTLCKK----GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDR 309

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M++   + N +T+N +I  LCKE K++EAL L   M++ G+   V  + ++I    + GD
Sbjct: 310 MLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGD 369

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            ++A ++  +M V SG    P+   +   I+ FC  G ++ AE++   M + G+  +  T
Sbjct: 370 FDYAHRILDQM-VSSGYQ--PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALT 426

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE-------------- 372
           Y  +ID Y   G    A  +   M   G  P++  Y+  I  L  E              
Sbjct: 427 YTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDS 486

Query: 373 ---------GDV------EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
                     DV      E AL +   M++    P+  TY+ L  GLC+ G +  A KL 
Sbjct: 487 IPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLF 546

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           + + E  +      YN L+N  C+      A +L+ +M+  G +P + +   L  G  + 
Sbjct: 547 DHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEE 606

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G+ E A  V+ N+ +     + V +  +I+GL K+   D    LL   +  G  +   TY
Sbjct: 607 GSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTY 666

Query: 537 NTLING 542
             LI G
Sbjct: 667 RMLIEG 672


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 274/585 (46%), Gaps = 27/585 (4%)

Query: 11  KSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKI------LEQMAPSLTNSLVN 64
           ++NS  +  +H+  Q  NP+    +   IC NL+Q    +      +  + P L    ++
Sbjct: 93  QTNSISNSLYHLLPQTQNPNN---IVNLICSNLKQHNSNLALLHTEVNALLPHLGAQEIS 149

Query: 65  RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS-- 122
           RV+   +     AL F+ WV  +     S ++ C IVH L   R F  A+  +  L+   
Sbjct: 150 RVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELV 209

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
            + +   +  + L+   E C   P VFD LV+A  ++G         +++   G   ++ 
Sbjct: 210 KDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVI 269

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
             N  L+ L+KLN   R W++Y+EM   G   N+ TFN++ + LCK+    +      +M
Sbjct: 270 TSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKM 329

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            + G  P++V +N +IN  C+ G L+ A  L++   +M    V+P+ V++  ++NG CK 
Sbjct: 330 EEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYK---IMYRRGVVPDLVSYTALMNGLCKE 386

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GRV  A ++ + M+  G+  ++ TY TLI GY + G  +E+  L  +M+  G+ P++   
Sbjct: 387 GRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTC 446

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
              +     EG    AL ++ ++    +      YS L   LCR     + F   N  L 
Sbjct: 447 WVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCREN---RPFAAKN--LL 501

Query: 423 EHMVGDAYS-----YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK- 476
           E M  D +      YN LI   C+ + +A A  L   M+ + + P++ TY  +J    + 
Sbjct: 502 ERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRL 561

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAIT 535
             ++EG   V E M      P+L I  ++  G C++  +D A+SLL   ++   + D  +
Sbjct: 562 SRSMEGESLVGE-MVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTES 620

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +N LI      G IA +  +   M  +G+  N +    +I+ L K
Sbjct: 621 FNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWK 665



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 175/356 (49%), Gaps = 5/356 (1%)

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
           W  VV F+M++    ++G +   L+ FR+M  +     +P  +T N ++NG  KL   + 
Sbjct: 231 WDPVV-FDMLVKAYLRMGRVREGLRSFRRMLRVG---FVPTVITSNYLLNGLLKLNYTDR 286

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
             E+   M + GI  N+ T+  L     + G + +  +  ++M + G  P+ V YN+ I+
Sbjct: 287 CWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLIN 346

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
               +G ++ A ++   M  + + PD  +Y+ L  GLC+ G V++A +L ++++   +  
Sbjct: 347 SYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSP 406

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +YN LI+  CK   +  ++ LL  MI  G+ PD  T   L++GY K G    A+ + 
Sbjct: 407 DIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLV 466

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFIN 546
             +++     +  IY+ +I  LC++    AAK+LL+   + G    +  YN LI  +   
Sbjct: 467 VELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQC 526

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
             IAEA  +  EM +  I  N   Y  +J  L +     +   L+  M+  G +PD
Sbjct: 527 DCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPD 582



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 165/341 (48%), Gaps = 3/341 (0%)

Query: 308 AEEIRYAMIKAGIDCNVR--TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
            E++   +I    DCN     +  L+  Y R G   E LR    M++ G +P  +  N  
Sbjct: 215 GEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYL 274

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++ L      +    V  +M    I P+ +T++ILT  LC++G   +  K   ++ EE  
Sbjct: 275 LNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGF 334

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +YN LIN  C+   L  A  L   M  RG++PD+++Y  L++G CK G +  A Q
Sbjct: 335 DPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQ 394

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           ++  M      P++V YN++I+G CK+  +  ++SLL      G+  D+ T   L+ GY 
Sbjct: 395 LFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYG 454

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             GK   A  +  E++  G+++++  Y+ LI  LC+      A+ L++ M   G   +  
Sbjct: 455 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELE 514

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            Y  L+  F +     E + L  +MV   + P+  TY A+J
Sbjct: 515 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJ 555



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 1/260 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D   + +L K   R G V++  +   ++L    V    + N L+N L K N      ++ 
Sbjct: 232 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 291

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M   G+ P++ T+  L    CK G+     +  E M++    P++V YN++IN  C+ 
Sbjct: 292 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 351

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD A  L +   R G++ D ++Y  L+NG    G++ EA  +F  M + G++ + V Y
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 411

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N LI+  CK G  Q++R L+  MI +GI PD  T   LV  + K       + L  ++  
Sbjct: 412 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQR 471

Query: 632 SGVSPDNQTYNAIISPLLGE 651
            GVS     Y+ +I  L  E
Sbjct: 472 FGVSISQDIYSYLIVALCRE 491


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/608 (25%), Positives = 289/608 (47%), Gaps = 47/608 (7%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR----RFDDALLLMGN 119
           N ++  F    K+ L  Y +   N     SL+ S A    L++      R D+A  ++  
Sbjct: 338 NTLIHGFFGEGKINLAIYIF---NQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 120 LMSANSVSPLEFL-EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
            M    V P E     LL+ Y  CK +            ++G    A D+I+ L+ +  S
Sbjct: 395 -MQITGVRPSELTYSALLNGY--CKHS------------KLGP---ALDLIKYLRSRSIS 436

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           ++   +   +    +L E+ +  ++ K M++ G   +V T++ +I  +CK   + E   +
Sbjct: 437 INRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             RM KSG+ PN V +  ++   C+ G  + ALK F  +   SG  ++ NSV HN ++  
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI-YRSG--LVANSVIHNALLCS 553

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           F + G +  AE+ +  M +  I  +V ++  +ID Y + G+  EA  + D MV+ G  P+
Sbjct: 554 FYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPD 613

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
              Y S +  L   G +  A   +  +++K    D  T + L  G+C++G + +A  L  
Sbjct: 614 ICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE 673

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           +++  +++ D Y+Y IL++  CK   +  A  LL  M+ +GL+PD I Y  L++G    G
Sbjct: 674 KMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEG 733

Query: 479 NIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
            ++ A  +++ +   E    + + YNS++NG  K   ++  + L++      +   + +Y
Sbjct: 734 QVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASY 793

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N L++GY   G+++    ++ +M   GI  + V Y +LI  LC++G  + A + ++ M+L
Sbjct: 794 NILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL 853

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVI----------------ELHDDMVLSGVSPDNQT 640
            G+ PD + +  L+  FS+       +                EL +DM   GV P    
Sbjct: 854 EGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVA 913

Query: 641 YNAIISPL 648
            ++I+  L
Sbjct: 914 ESSIVRGL 921



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 163/642 (25%), Positives = 296/642 (46%), Gaps = 44/642 (6%)

Query: 38  AICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESS 97
           +I   L  ++W+ L QMA         +     +   KLAL     + + +         
Sbjct: 60  SIITVLAMQRWETLSQMA--------YKSGKLDKAHGKLALRMLDSIVQQSGLDRITHIY 111

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALVRAC 156
           C  VH+LV  +    A+ ++ +L +    S       LL +   C  T     D LV A 
Sbjct: 112 CMAVHILVQAQMPSQAMSVLRHL-ALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAY 170

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            + G    A   I  +   G   S+ + NN L+ LV +N+    W   KE +   +  +V
Sbjct: 171 VKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDV 230

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T N+V+ +LC + KL +A S+  +M K+   PN V +N I+N   + G  + AL++   
Sbjct: 231 TTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDD 289

Query: 277 M---GV-----------------------------MSGDSVLPNSVTHNCIINGFCKLGR 304
           M   G+                             M   ++ P+  ++N +I+GF   G+
Sbjct: 290 MEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGK 349

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           +  A  I   M++  +  +V TY  LIDGY R G ++EA R+  EM   G+ P+ + Y++
Sbjct: 350 INLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSA 409

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            ++       +  AL ++  +  + I  +   Y+IL  G C+ G V +A ++   +L + 
Sbjct: 410 LLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADG 469

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  D  +Y+ LIN +CK   +   K++LS M   G++P+ + Y TL+  +CK G+ + A+
Sbjct: 470 IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEAL 529

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           + + ++ +     N VI+N+++    ++  +  A+   Q   R+ +  D  ++N +I+ Y
Sbjct: 530 KYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSY 589

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G + EAF+++  M   G   +   Y  L+  LC+ G   QA+E M  ++      D 
Sbjct: 590 CQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDE 649

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            T  TL+    K+ + +E ++L + MV   + PD  TY  ++
Sbjct: 650 KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL 691



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 245/513 (47%), Gaps = 6/513 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K + A + AL+    + G T+ A  V+ ++++ G   S   ++  L+   K +++G    
Sbjct: 366 KPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALD 425

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L K + S     N   + ++I   C+  ++ +A  +   ML  GI P+V+ ++ +IN  C
Sbjct: 426 LIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMC 485

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++G +    ++  +M       VLPN+V +  ++  FCK G  + A +    + ++G+  
Sbjct: 486 KMGMIHETKEILSRM---QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVA 542

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N   +  L+  + R G   EA +    M +  +  +   +N  I      G+V  A  V 
Sbjct: 543 NSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVY 602

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+     PD  TY  L +GLC+ G + QA +    +LE+    D  + N L+  +CK 
Sbjct: 603 DNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKH 662

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L  A  L   M+ R ++PD  TY  L+DG+CK G +  A+ + + M +    P+ + Y
Sbjct: 663 GTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAY 722

Query: 503 NSIINGLCKDASLDAAKSLLQASQ-RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
             ++NGL  +  + AA  + Q    + GL  D I YN+++NGY   G+I E   +   M 
Sbjct: 723 TCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMH 782

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
              +  +   YNIL++   K G   +   L + M+  GI PD VTY  L+    +    E
Sbjct: 783 ENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIE 842

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
             ++  + MVL GV PDN  ++ +I     EKS
Sbjct: 843 IAVKFLEKMVLEGVFPDNLAFDILIKA-FSEKS 874



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 233/481 (48%), Gaps = 33/481 (6%)

Query: 147  AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL------SHLVKLNEIGRF 200
            A F+ ++ +  Q G    A+ V   +   G    I  + + L       HLV+  E    
Sbjct: 580  ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE---- 635

Query: 201  WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            + +Y    +C   E   T N ++  +CK   L+EAL L  +M+   I P+   + ++++ 
Sbjct: 636  FMVYLLEKACAIDEK--TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 693

Query: 261  ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAG 319
             C+ G +  AL L +   +M    ++P+++ + C++NG    G+V+ A  +   +I K G
Sbjct: 694  FCKRGKVVPALILLQ---MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 750

Query: 320  IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            +  +   Y ++++GY +GG   E  RL   M +  + P++  YN  +H    +G +   L
Sbjct: 751  LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 810

Query: 380  FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            ++  DM+ + I PD+ TY +L  GLC  G ++ A K   +++ E +  D  +++ILI   
Sbjct: 811  YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 870

Query: 440  CKSNNLAAAKQLLS----------------SMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
             + + ++ A QL S                 M   G++P  +   +++ G CK G +E A
Sbjct: 871  SEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 930

Query: 484  VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
            + V+ ++ +    P +  + ++++GLCK+  +D A  L Q  +  GL +D +TYN LI G
Sbjct: 931  IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 990

Query: 543  YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
                  I +A  ++ EM++ G+  N   Y  L   +   G  Q   +L+K +   GI+P 
Sbjct: 991  LCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050

Query: 603  Y 603
            Y
Sbjct: 1051 Y 1051



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 214/464 (46%), Gaps = 29/464 (6%)

Query: 215  NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL----EFA 270
            +V +FN +I + C+   + EA S+Y  M++ G  P++  +  ++   CQ G L    EF 
Sbjct: 578  DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 637

Query: 271  LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            + L  K   +       +  T N ++ G CK G ++ A ++   M+   I  +  TY  L
Sbjct: 638  VYLLEKACAI-------DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 690

Query: 331  IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH- 389
            +DG+ + G    AL L   M+++GL+P+ + Y   ++ L  EG V+ A ++  ++I K  
Sbjct: 691  LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 750

Query: 390  ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
            +  D   Y+ +  G  + G + +  +L   + E  +   + SYNIL++   K   L+   
Sbjct: 751  LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 810

Query: 450  QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             L   M+  G+ PD +TY  LI G C+ G IE AV+  E M      P+ + ++ +I   
Sbjct: 811  YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 870

Query: 510  CKDASLDAAKSLLQASQRIGLLDA-----------------ITYNTLINGYFINGKIAEA 552
             + + +  A  L    + +G +D                  +  ++++ G    GK+ EA
Sbjct: 871  SEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEA 930

Query: 553  FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
              +FS +   G+      +  L++ LCK      A  L ++M   G+  D VTY  L+T 
Sbjct: 931  IIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITG 990

Query: 613  FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                    + ++L+++M   G+ P+  TY  +   +    + +D
Sbjct: 991  LCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQD 1034



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 136/323 (42%), Gaps = 20/323 (6%)

Query: 343 ALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM-IDKHICPDHFTYSIL 400
           ALR+ D +V++ GL     +Y   +H L        A+ VL  + +    C   F+  + 
Sbjct: 91  ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLR 150

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDA----------------YSYNILINYLCKSNN 444
           T   C    +     L N  ++E  V DA                +S N ++N L   N 
Sbjct: 151 TISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINK 210

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
                  L   + R    D+ T   +++  C  G +  A  + + MK   + PN V YN+
Sbjct: 211 SEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNC-RLPNAVTYNT 269

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           I+N   K     +A  +L   ++ G+  D  TYN +I+      + A A+ +   MR V 
Sbjct: 270 ILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN 329

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  ++  YN LI+     G    A  +   M+   + P   TYT L+  + +N   +E  
Sbjct: 330 LTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEAR 389

Query: 624 ELHDDMVLSGVSPDNQTYNAIIS 646
            +  +M ++GV P   TY+A+++
Sbjct: 390 RVLYEMQITGVRPSELTYSALLN 412



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 36/164 (21%)

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG---------------I 564
           SLL+   R    +  + + L+N Y   GK+ +A A    M   G               +
Sbjct: 147 SLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALV 206

Query: 565 AVNKVGY--------------------NILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            +NK  Y                    NI++N LC  G   +A  +++ M  +  +P+ V
Sbjct: 207 GINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAV 265

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           TY T++  + K    +  + + DDM  +G+  D  TYN +I  L
Sbjct: 266 TYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 253/514 (49%), Gaps = 17/514 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            V D ++    +  A E  + V+Q+LK     +S  A++  +    +     +  + +  
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSL 153

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       ++  FNL+++ L ++     AL++Y +MLK  + P+VV + ++I+  C+   
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + AL LF +M   +   +LPN + ++ +++G C+  ++  A+ +   M  +G + ++ T
Sbjct: 214 TQDALVLFDEM---TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT 270

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L++G+ + G  ++A  L   + K G +   + Y   I+ LF     E A      M+
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            ++I PD   Y+I+ +GL + G V +A  L  ++ E  +  D   YN LI   C    L 
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A+ L   +      P+  TY  LI G CK G I  A  +++ M+K+   P++V +NS+I
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 507 NGLCKDASLDAAKSL-------------LQASQRIG-LLDAITYNTLINGYFINGKIAEA 552
           NGLCK   L+ A+ L             L+ SQ    + D  +   ++     +G I +A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           + +  ++ + G+  +   YNILIN  CKFG    A +L K M L G +PD VTY TL+  
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             +    E+ +E+ + MV  G  P++ TY  I++
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 225/487 (46%), Gaps = 52/487 (10%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K +   F  L+ A ++ G  E A +    ++       + A+N  L  LV+         
Sbjct: 125 KISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALA 184

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +Y +M+ C    +V T+ ++I+ LCK CK ++AL L+  M   GI PN + ++++++  C
Sbjct: 185 VYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLC 244

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q   +  A +LF KM     +  L   +T+N ++NGFCK G ++ A  +   + K G   
Sbjct: 245 QAKKIFDAQRLFSKMRASGCNRDL---ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V  Y  LI+G  R    EEA     +M++  + P+ ++Y   I  L  EG V  AL +L
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M ++ + PD   Y+ L KG C  G + +A  L  ++ +     + ++Y+ILI  +CK+
Sbjct: 362 GEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK------ 496
             +  A+ +   M   G +P ++T+ +LI+G CK   +E A  ++  M+ V K       
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481

Query: 497 ------------------------------------------PNLVIYNSIINGLCKDAS 514
                                                     P++  YN +ING CK  +
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541

Query: 515 LDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           ++ A  L +  Q  G + D++TY TLI+G +  G+  +A  +F +M   G       Y  
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 574 LINFLCK 580
           ++ + C+
Sbjct: 602 IMTWSCR 608



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 243/530 (45%), Gaps = 72/530 (13%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H L    +  DAL+L    M+   + P + +  ++ S  +C+A   +FDA        
Sbjct: 204 LIHGLCKTCKTQDALVLFDE-MTDRGILPNQIIYSIVLS-GLCQAK-KIFDA-------- 252

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                   +  K++  G +  +  +N  L+   K   +   + L + +   G++  V  +
Sbjct: 253 ------QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGY 306

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I  L +  + EEA   Y +ML+  I P+V+ + ++I    Q G +  AL L   +G 
Sbjct: 307 GCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTL---LGE 363

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M+   + P+++ +N +I GFC +G ++ AE +R  + K     N  TY+ LI G  + G 
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGL 423

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--------------LFV-LSD 384
             +A  +  EM K G +P+ V +NS I+ L     +E A              LF+ LS 
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQ 483

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
             DK    D  +  ++ + LC +G + +A+KL  Q+++  ++ D  +YNILIN  CK  N
Sbjct: 484 GTDKVF--DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A +L   M ++G +PD +TYGTLIDG  + G  E A++++E M K    P    Y +
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 505 IINGLCKDASLDAAKSL---------------------------LQASQRIGL------- 530
           I+   C++ ++  A S+                           LQ + R  L       
Sbjct: 602 IMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSK 661

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             D   Y   + G     +  EAFA+FS +++  + ++     +LI  LC
Sbjct: 662 NFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLC 711



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 167/368 (45%), Gaps = 1/368 (0%)

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
              + II    K    E   ++   +  + I  +   ++ LI+ Y+  G  E+A+     
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSL 153

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M      P+   +N  +H+L  +     AL V + M+  ++ PD  TY IL  GLC+   
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            + A  L +++ +  ++ +   Y+I+++ LC++  +  A++L S M   G   D+ITY  
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L++G+CK G ++ A  + + + K      ++ Y  +INGL +    + A    Q   R  
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D + Y  +I G    G++ EA  +  EM   G+  + + YN LI   C  G   +A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   +  H   P+  TY+ L+    KN    +   +  +M   G  P   T+N++I+ L
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 649 LGEKSAED 656
                 E+
Sbjct: 454 CKANRLEE 461



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 56/367 (15%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           ++AL++    +G  + A  +  +L++  H    + H ++  +  + K   I +   ++KE
Sbjct: 376 YNALIKGFCDMGYLDEAESL--RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKE 433

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM-----------LKSGIWP--NVVC 253
           M   G + +V TFN +I  LCK  +LEEA  L+Y+M           L  G     ++  
Sbjct: 434 MEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
             +++   C+ G +  A KL  ++ V SG  VLP+  T+N +INGFCK G +  A ++  
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQL-VDSG--VLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M   G   +  TY TLIDG  R G +E+AL + ++MVK+G +P +  Y + + W   E 
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610

Query: 374 DVEGALFV-------------------------------LSDMIDKHICPDHF---TYSI 399
           ++  AL V                               +  +++  I   +F    Y+I
Sbjct: 611 NISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTI 670

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
              GL +     +AF + + + +  M   + S  +LI  LC   NL  A  +    + RG
Sbjct: 671 FLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730

Query: 460 --LIPDI 464
             L+P I
Sbjct: 731 FRLMPPI 737


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 246/528 (46%), Gaps = 18/528 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C      + +L+    + G  + AY+++ +++ +G    +   N  +  L K    G 
Sbjct: 24  ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGD 83

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM-LKSGIWPNVVCFNMII 258
               +K +       ++ TFN+++ AL K  ++EEA  ++  M   S   PNVV +  +I
Sbjct: 84  ALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVI 143

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N  C+ G L+ A++L   + +M+     PN +T++ ++ G CK GR +    +   M + 
Sbjct: 144 NGLCKDGKLDRAIEL---LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   +V  Y TL++G  +    +EAL L   M++ G  P  V YNS +        V+ A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             ++  M ++   PD   Y+ +  GLCR+  +  A  L  Q++    V D  +Y+ +I+ 
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 439 LCK------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           LCK         L AA ++L  M   G  P+  TY  +I+G C+    + A+ +   M  
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            E  P+L  ++ +I  LCK   LDAA  +    S+R    + + Y  LI+G    G++ +
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 552 A---FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           A   F +  E    G+A     YN +++ LC  G  ++A  +++ MI     PD  +Y  
Sbjct: 441 AVRVFELMVESFRPGVAT----YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    +    EE  EL   +   G + +   YN +++ L  +K   D
Sbjct: 497 LIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSD 544



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 207/438 (47%), Gaps = 49/438 (11%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE------- 306
            N  +N   + G    A++LFR+      +  +PN  T+  +I+G CK G+++       
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFRE------ERCVPNEFTYGSLIHGLCKAGKLDQAYELLD 54

Query: 307 --------------------------FAEEIRYAMIKAGIDC--NVRTYATLIDGYARGG 338
                                     F + + Y    AG  C  ++ T+  L+D   + G
Sbjct: 55  EMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSG 114

Query: 339 SSEEALRLCDEM-VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
             EEA ++ + M      +PN V Y + I+ L  +G ++ A+ +L  M +   CP+  TY
Sbjct: 115 RVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITY 174

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           S+L +GLC+ G   + F L  ++       D   YN L+N LCKS  L  A +L+  MI 
Sbjct: 175 SVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G  P ++TY +L++ +C+   ++ A ++ + M +    P+++ YN++I GLC+DA LD 
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294

Query: 518 AKSLL-QASQRIGLLDAITYNTLINGYF------INGKIAEAFAMFSEMRNVGIAVNKVG 570
           A++LL Q      + D ITY+T+I+G         + K+  A  +   M+  G   N   
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y ++I  LC+    QQA  L++ MI   ++PD  +++ ++    K+   +   ++   M 
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 631 LSGVSPDNQTYNAIISPL 648
                P+   Y A+I  L
Sbjct: 415 ERECKPNPVAYAALIDGL 432



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 220/459 (47%), Gaps = 17/459 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DAL+  G +  A      +  E +  S + C      +  ++    + G  + A +++  
Sbjct: 108 DALVKSGRVEEA-----FQIFESMHTSSQ-CLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G   ++  ++  +  L K     + + L +EM   G+  +V  +N ++  LCK  +
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L+EAL L   M++SG +P VV +N ++   C+   ++ A   FR + VMS     P+ + 
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA---FRLIQVMSERGCPPDVIN 278

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS------EEALR 345
           +N +I G C+  R++ A+ +   M+ A    +V TY+T+IDG  +          E A  
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           + + M + G  PN   Y   I  L      + AL +L  MID  + PD  ++S++   LC
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           ++  +  A+K+   + E     +  +Y  LI+ L K   +  A ++   ++V    P + 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVA 457

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY +++DG C  G IE AV++ E M   E  P+   Y ++I GLC+ + ++ A  L QA 
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +  G  ++   YN L+N      ++++A  + +++   G
Sbjct: 518 EAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/439 (31%), Positives = 216/439 (49%), Gaps = 19/439 (4%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEACQVGDLEFALKL--- 273
             ++VI A      +E+AL LYY +LK+  + P+V+  N ++N   ++G +E A K    
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCI 190

Query: 274 ----FRKMGVMS----------GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
                 K G +           G   +PN + +N +I+G+CK G +E A  +   +   G
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 250

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
               V TY  +I+G+ + G  +   RL  EM  RGL  N  VYN+ I   +  G +  A+
Sbjct: 251 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 310

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
             +  MI+    PD  TY+ L  G CR+G V +A +L  Q L + ++ + +SY  LI+  
Sbjct: 311 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 370

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK      A   L  M  RG  PD++TYG L+ G    G ++ A+ + E M +    P+ 
Sbjct: 371 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 430

Query: 500 VIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
            IYN +++GLCK   L AAK LL +   +  L DA  Y TL++G+  NG + EA  +F  
Sbjct: 431 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 490

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
               G+    VGYN +I   CKFG  + A   +  M    + PD  TY+T++  + K   
Sbjct: 491 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 550

Query: 619 PEEVIELHDDMVLSGVSPD 637
            +   ++  +MV     P+
Sbjct: 551 LDGAQKMFREMVKMKCKPN 569



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 254/539 (47%), Gaps = 34/539 (6%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSP--KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
           +E+M+P  T   ++ V+  +  S   + ALE Y +V +   +   + +  +++++LV   
Sbjct: 122 VEEMSP--TREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLG 179

Query: 109 RFDDA----------LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           R + A          L   G L     +    + +G       C      ++ L+    +
Sbjct: 180 RIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQG-------CIPNIIFYNTLIDGYCK 232

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
            G  E A  +  +LK+KG   ++  +   ++   K  +     +L  EM S G   NV  
Sbjct: 233 KGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQV 292

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N +I A  K   + +A+     M++ G  P++V +N +I+ +C+ G +  A +L  +  
Sbjct: 293 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQA- 351

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
              G  ++PN  ++  +I+ +CK G  + A      M + G   ++ TY  L+ G    G
Sbjct: 352 --LGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 409

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             + AL + ++M++RG+ P+  +YN  +  L  +  +  A  +L++M+D+ + PD F Y+
Sbjct: 410 EVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYA 469

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G  RNG + +A KL    +E+ M      YN +I   CK   +  A   ++ M  R
Sbjct: 470 TLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKR 529

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            L PD  TY T+IDGY K  +++GA +++  M K++ KPN      +++GL     L   
Sbjct: 530 HLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN------VMDGL--QGLLLII 581

Query: 519 KSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            SL   A+     L  I Y+++++ Y   G  +EA  +   M     + +KVG NI ++
Sbjct: 582 PSLFAFANMECSELHCINYSSILDQYLPQG-TSEASVILQTMFEECQSHSKVGDNIQVS 639



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 188/398 (47%), Gaps = 18/398 (4%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P     +++I      G +E AL+L+    V+   +  P+ +  N ++N   KLGR+E A
Sbjct: 127 PTREAMSIVIQAYSDSGLVEKALELY--YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M+K               G  + G  EE  +L ++   +G +PN + YN+ I  
Sbjct: 185 RKFTCIMVK---------------GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDG 229

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
              +GD+E A  +  ++  K   P   TY  +  G C+ G  K   +L  ++    +  +
Sbjct: 230 YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVN 289

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              YN +I+   K  ++  A + +  MI  G  PDI+TY TLI G C+ G +  A Q+ E
Sbjct: 290 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 349

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKS-LLQASQRIGLLDAITYNTLINGYFING 547
                   PN   Y  +I+  CK    D A + L++ ++R    D +TY  L++G  + G
Sbjct: 350 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 409

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++  A  +  +M   G+  +   YNIL++ LCK      A+ L+  M+   ++PD   Y 
Sbjct: 410 EVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYA 469

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           TLV  F +N + +E  +L +  +  G++P    YNA+I
Sbjct: 470 TLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMI 507



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 29/347 (8%)

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVY 362
           RVE     R AM            + +I  Y+  G  E+AL L   ++K     P+ +  
Sbjct: 121 RVEEMSPTREAM------------SIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIAC 168

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS ++ L   G +E A         K  C       I+ KGLC+ G +++  KL      
Sbjct: 169 NSLLNMLVKLGRIEIA--------RKFTC-------IMVKGLCKEGKLEEGRKLIEDRWG 213

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           +  + +   YN LI+  CK  ++  A  L   + ++G +P + TYG +I+G+CK G+ + 
Sbjct: 214 QGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKA 273

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
             ++   M       N+ +YN+II+   K   +  A   ++     G   D +TYNTLI+
Sbjct: 274 IDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLIS 333

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G   +GK++EA  +  +    G+  NK  Y  LI+  CK G Y +A   +  M   G  P
Sbjct: 334 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKP 393

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           D VTY  LV         +  + + + M+  GV PD   YN ++S L
Sbjct: 394 DLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGL 440



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 32/319 (10%)

Query: 358 NNVVYNSTIHWL-----FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           N   Y+S +  L     F+E +V     VL +M  + + P     SI+ +    +G V++
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEV-----VLENMRVEEMSPTREAMSIVIQAYSDSGLVEK 147

Query: 413 AFKLHNQVLEEHM-VGDAYSYNILINYL--------------------CKSNNLAAAKQL 451
           A +L+  VL+ +    D  + N L+N L                    CK   L   ++L
Sbjct: 148 ALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKL 207

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +     +G IP+II Y TLIDGYCK G++E A  ++  +K     P +  Y +IING CK
Sbjct: 208 IEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 267

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
                A   LL      GL ++   YNT+I+  + +G I +A      M   G   + V 
Sbjct: 268 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVT 327

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN LI+  C+ G   +A +L++  +  G++P+  +YT L+  + K    +       +M 
Sbjct: 328 YNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMT 387

Query: 631 LSGVSPDNQTYNAIISPLL 649
             G  PD  TY A++  L+
Sbjct: 388 ERGHKPDLVTYGALVHGLV 406


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 246/528 (46%), Gaps = 18/528 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C      + +L+    + G  + AY+++ +++ +G    +   N  +  L K    G 
Sbjct: 24  ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGD 83

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM-LKSGIWPNVVCFNMII 258
               +K +       ++ TFN+++ AL K  ++EEA  ++  M   S   PNVV +  +I
Sbjct: 84  ALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVI 143

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N  C+ G L+ A++L   + +M+     PN +T++ ++ G CK GR +    +   M + 
Sbjct: 144 NGLCKDGKLDRAIEL---LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   +V  Y TL++G  +    +EAL L   M++ G  P  V YNS +        V+ A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             ++  M ++   PD   Y+ +  GLCR+  +  A  L  Q++    V D  +Y+ +I+ 
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 439 LCK------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           LCK         L AA ++L  M   G  P+  TY  +I+G C+    + A+ +   M  
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAE 551
            E  P+L  ++ +I  LCK   LDAA  +    S+R    + + Y  LI+G    G++ +
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 552 A---FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           A   F +  E    G+A     YN +++ LC  G  ++A  +++ MI     PD  +Y  
Sbjct: 441 AVRVFELMVESFRPGVAT----YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGA 496

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    +    EE  EL   +   G + +   YN +++ L  +K   D
Sbjct: 497 LIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSD 544



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 207/438 (47%), Gaps = 49/438 (11%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE------- 306
            N  +N   + G    A++LFR+      +  +PN  T+  +I+G CK G+++       
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFRE------ERCVPNEFTYGSLIHGLCKAGKLDQAYELLD 54

Query: 307 --------------------------FAEEIRYAMIKAGIDC--NVRTYATLIDGYARGG 338
                                     F + + Y    AG  C  ++ T+  L+D   + G
Sbjct: 55  EMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSG 114

Query: 339 SSEEALRLCDEM-VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
             EEA ++ + M      +PN V Y + I+ L  +G ++ A+ +L  M +   CP+  TY
Sbjct: 115 RVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITY 174

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           S+L +GLC+ G   + F L  ++       D   YN L+N LCKS  L  A +L+  MI 
Sbjct: 175 SVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIR 234

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G  P ++TY +L++ +C+   ++ A ++ + M +    P+++ YN++I GLC+DA LD 
Sbjct: 235 SGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDD 294

Query: 518 AKSLL-QASQRIGLLDAITYNTLINGYF------INGKIAEAFAMFSEMRNVGIAVNKVG 570
           A++LL Q      + D ITY+T+I+G         + K+  A  +   M+  G   N   
Sbjct: 295 AQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGT 354

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y ++I  LC+    QQA  L++ MI   ++PD  +++ ++    K+   +   ++   M 
Sbjct: 355 YAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMS 414

Query: 631 LSGVSPDNQTYNAIISPL 648
                P+   Y A+I  L
Sbjct: 415 ERECKPNPVAYAALIDGL 432



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 220/459 (47%), Gaps = 17/459 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DAL+  G +  A      +  E +  S + C      +  ++    + G  + A +++  
Sbjct: 108 DALVKSGRVEEA-----FQIFESMHTSSQ-CLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G   ++  ++  +  L K     + + L +EM   G+  +V  +N ++  LCK  +
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L+EAL L   M++SG +P VV +N ++   C+   ++ A   FR + VMS     P+ + 
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA---FRLIQVMSERGCPPDVIN 278

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS------EEALR 345
           +N +I G C+  R++ A+ +   M+ A    +V TY+T+IDG  +          E A  
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACE 338

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           + + M + G  PN   Y   I  L      + AL +L  MID  + PD  ++S++   LC
Sbjct: 339 ILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLC 398

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           ++  +  A+K+   + E     +  +Y  LI+ L K   +  A ++   ++V    P + 
Sbjct: 399 KSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVA 457

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY +++DG C  G IE AV++ E M   E  P+   Y ++I GLC+ + ++ A  L QA 
Sbjct: 458 TYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAV 517

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +  G  ++   YN L+N      ++++A  + +++   G
Sbjct: 518 EAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 216/429 (50%), Gaps = 4/429 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS +VKL +      L K+M   G   ++ TFN+VI   C   ++  ALS+ 
Sbjct: 84  SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +MLK G  P+ V    ++N  C+   +  A+ L  KM  +      P+ V +N II+  
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI---GYKPDIVAYNAIIDSL 200

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK  RV  A +    + + GI  NV TY  L++G        +A RL  +M+K+ + PN 
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y++ +      G V  A  +  +M+   I PD  TYS L  GLC +  + +A ++ + 
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDL 320

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +  + D  SYN LIN  CK+  +    +L   M  RGL+ + +TY TLI G+ + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A + +  M      P++  YN ++ GLC +  L+ A  + +  Q+  + LD +TY T
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G    GK+ EA+++F  +   G+  + V Y  +++ LC  G   +   L   M   G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500

Query: 599 IIPDYVTYT 607
           ++ +  T +
Sbjct: 501 LMKNDCTLS 509



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 222/422 (52%), Gaps = 4/422 (0%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ KL +A+ L+  M+KS  +P++V FN +++   ++   +  + L +KM V+    +  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRN 118

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T N +IN FC   +V  A  I   M+K G + +  T  +L++G+ R     +A+ L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D+MV+ G  P+ V YN+ I  L     V  A     ++  K I P+  TY+ L  GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
                A +L + ++++ +  +  +Y+ L++   K+  +  AK+L   M+   + PDI+TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQ 526
            +L++G C    I+ A Q+++ M       ++V YN++ING CK   + D  K   + SQ
Sbjct: 299 SSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R  + + +TYNTLI G+F  G + +A   FS+M   GI+ +   YNIL+  LC  G  ++
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  + + M    +  D VTYTT++    K    EE   L   + L G+ PD  TY  ++S
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478

Query: 647 PL 648
            L
Sbjct: 479 GL 480



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 226/450 (50%), Gaps = 7/450 (1%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           +KLN+      L+ +MV      ++  FN ++ A+ K  K +  +SL  +M   GI  ++
Sbjct: 64  IKLNDA---IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN++IN  C    +  AL +  KM  +  +   P+ VT   ++NGFC+  RV  A  +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYE---PDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M++ G   ++  Y  +ID   +     +A     E+ ++G+ PN V Y + ++ L  
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
                 A  +LSDMI K I P+  TYS L     +NG V +A +L  +++   +  D  +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+ L+N LC  + +  A Q+   M+ +G + D+++Y TLI+G+CK   +E  ++++  M 
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +     N V YN++I G  +   +D A+         G+  D  TYN L+ G   NG++ 
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A  +F +M+   + ++ V Y  +I  +CK G  ++A  L   + L G+ PD VTYTT++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           +         EV  L+  M   G+  ++ T
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 215/420 (51%), Gaps = 4/420 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+ A  ++   +    + +K++V G    ++ +N  ++      ++     +  +M+
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY  +  T   ++   C+  ++ +A+SL  +M++ G  P++V +N II+  C+   + 
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A   F+++       + PN VT+  ++NG C   R   A  +   MIK  I  NV TY+
Sbjct: 208 DAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+D + + G   EA  L +EMV+  + P+ V Y+S ++ L     ++ A  +   M+ K
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  +Y+ L  G C+   V+   KL  ++ +  +V +  +YN LI    ++ ++  A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++  S M   G+ PDI TY  L+ G C  G +E A+ ++E+M+K E   ++V Y ++I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +CK   ++ A SL  +    GL  D +TY T+++G    G + E  A++++M+  G+  N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 179/371 (48%), Gaps = 13/371 (3%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     ++A++ +  +      A+D  ++++ KG   ++  +   ++ L   +      +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  +M+      NV T++ ++ A  K  K+ EA  L+  M++  I P++V ++ ++N  C
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC 306

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
               ++ A ++F    +M     L + V++N +INGFCK  RVE   ++   M + G+  
Sbjct: 307 LHDRIDEANQMF---DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY TLI G+ + G  ++A     +M   G+ P+   YN  +  L   G++E AL + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM  + +  D  TY+ + +G+C+ G V++A+ L   +  + +  D  +Y  +++ LC  
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L   + L + M   GL+ +        D     G+I  + ++ + M      P+L+  
Sbjct: 484 GLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL-- 533

Query: 503 NSIINGLCKDA 513
             I +G+CK A
Sbjct: 534 KDIKSGVCKKA 544



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 142/280 (50%), Gaps = 1/280 (0%)

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A+ + SDM+     P    ++ L   + +         L  ++    +  D Y++NI+IN
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             C    ++ A  +L  M+  G  PD +T G+L++G+C+   +  AV + + M ++  KP
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           ++V YN+II+ LCK   ++ A    +  +R G+  + +TY  L+NG   + + ++A  + 
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           S+M    I  N + Y+ L++   K G   +A+EL + M+   I PD VTY++LV     +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLH 308

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              +E  ++ D MV  G   D  +YN +I+     K  ED
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 119/250 (47%), Gaps = 1/250 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L+K   R+  +  A  L + +++         +N L++ + K         L   M V G
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  D+ T+  +I+ +C    +  A+ +   M K+  +P+ V   S++NG C+   +  A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           SL+     IG   D + YN +I+      ++ +AF  F E+   GI  N V Y  L+N L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C    +  A  L+  MI   I P+ +TY+ L+  F KN    E  EL ++MV   + PD 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 639 QTYNAIISPL 648
            TY+++++ L
Sbjct: 296 VTYSSLVNGL 305



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/192 (20%), Positives = 89/192 (46%), Gaps = 6/192 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C A    ++ L+    +    E    + +++  +G   +   +N  +    +  ++ +  
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + + +M   G   ++ T+N+++  LC   +LE+AL ++  M K  +  ++V +  +I   
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A  LF  + +     + P+ VT+  +++G C  G +   E +   M + G+ 
Sbjct: 446 CKTGKVEEAWSLFCSLSL---KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL- 501

Query: 322 CNVRTYATLIDG 333
             ++   TL DG
Sbjct: 502 --MKNDCTLSDG 511


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 222/422 (52%), Gaps = 4/422 (0%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ KL +A+ L+  M+KS  +P++V FN +++   ++   +  + L +KM V+    +  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRN 118

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  T N +IN FC   +V  A  I   M+K G + +  T  +L++G+ R     +A+ L 
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D+MV+ G  P+ V YN+ I  L     V  A     ++  K I P+  TY+ L  GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
                A +L + ++++ +  +  +Y+ L++   K+  +  AK+L   M+   + PDI+TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQ 526
            +LI+G C    I+ A Q+++ M       ++V YN++ING CK   + D  K   + SQ
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R  + + +TYNTLI G+F  G + +A   FS+M   GI+ +   YNIL+  LC  G  ++
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  + + M    +  D VTYTT++    K    EE   L   + L G+ PD  TY  ++S
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478

Query: 647 PL 648
            L
Sbjct: 479 GL 480



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 216/429 (50%), Gaps = 4/429 (0%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  +N  LS +VKL +      L K+M   G   ++ TFN+VI   C   ++  ALS+ 
Sbjct: 84  SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +MLK G  P+ V    ++N  C+   +  A+ L  KM  +      P+ V +N II+  
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI---GYKPDIVAYNAIIDSL 200

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK  RV  A +    + + GI  NV TY  L++G        +A RL  +M+K+ + PN 
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y++ +      G V  A  +  +M+   I PD  TYS L  GLC +  + +A ++ + 
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +  + D  SYN LIN  CK+  +    +L   M  RGL+ + +TY TLI G+ + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
           ++ A + +  M      P++  YN ++ GLC +  L+ A  + +  Q+  + LD +TY T
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G    GK+ EA+++F  +   G+  + V Y  +++ LC  G   +   L   M   G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500

Query: 599 IIPDYVTYT 607
           ++ +  T +
Sbjct: 501 LMKNDCTLS 509



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 226/450 (50%), Gaps = 7/450 (1%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           +KLN+      L+ +MV      ++  FN ++ A+ K  K +  +SL  +M   GI  ++
Sbjct: 64  IKLNDA---IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN++IN  C    +  AL +  KM  +  +   P+ VT   ++NGFC+  RV  A  +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYE---PDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M++ G   ++  Y  +ID   +     +A     E+ ++G+ PN V Y + ++ L  
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
                 A  +LSDMI K I P+  TYS L     +NG V +A +L  +++   +  D  +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+ LIN LC  + +  A Q+   M+ +G + D+++Y TLI+G+CK   +E  ++++  M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           +     N V YN++I G  +   +D A+         G+  D  TYN L+ G   NG++ 
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A  +F +M+   + ++ V Y  +I  +CK G  ++A  L   + L G+ PD VTYTT++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
           +         EV  L+  M   G+  ++ T
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 215/420 (51%), Gaps = 4/420 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+ A  ++   +    + +K++V G    ++ +N  ++      ++     +  +M+
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY  +  T   ++   C+  ++ +A+SL  +M++ G  P++V +N II+  C+   + 
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A   F+++       + PN VT+  ++NG C   R   A  +   MIK  I  NV TY+
Sbjct: 208 DAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+D + + G   EA  L +EMV+  + P+ V Y+S I+ L     ++ A  +   M+ K
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  +Y+ L  G C+   V+   KL  ++ +  +V +  +YN LI    ++ ++  A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++  S M   G+ PDI TY  L+ G C  G +E A+ ++E+M+K E   ++V Y ++I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +CK   ++ A SL  +    GL  D +TY T+++G    G + E  A++++M+  G+  N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 179/371 (48%), Gaps = 13/371 (3%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     ++A++ +  +      A+D  ++++ KG   ++  +   ++ L   +      +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  +M+      NV T++ ++ A  K  K+ EA  L+  M++  I P++V ++ +IN  C
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
               ++ A ++F    +M     L + V++N +INGFCK  RVE   ++   M + G+  
Sbjct: 307 LHDRIDEANQMF---DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY TLI G+ + G  ++A     +M   G+ P+   YN  +  L   G++E AL + 
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM  + +  D  TY+ + +G+C+ G V++A+ L   +  + +  D  +Y  +++ LC  
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             L   + L + M   GL+ +        D     G+I  + ++ + M      P+L+  
Sbjct: 484 GLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL-- 533

Query: 503 NSIINGLCKDA 513
             I +G+CK A
Sbjct: 534 KDIKSGVCKKA 544



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 1/280 (0%)

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A+ + SDM+     P    ++ L   + +         L  ++    +  D Y++NI+IN
Sbjct: 69  AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             C    ++ A  +L  M+  G  PD +T G+L++G+C+   +  AV + + M ++  KP
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           ++V YN+II+ LCK   ++ A    +  +R G+  + +TY  L+NG   + + ++A  + 
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           S+M    I  N + Y+ L++   K G   +A+EL + M+   I PD VTY++L+     +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              +E  ++ D MV  G   D  +YN +I+     K  ED
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 1/250 (0%)

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L+K   R+  +  A  L + +++         +N L++ + K         L   M V G
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  D+ T+  +I+ +C    +  A+ +   M K+  +P+ V   S++NG C+   +  A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           SL+     IG   D + YN +I+      ++ +AF  F E+   GI  N V Y  L+N L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C    +  A  L+  MI   I P+ +TY+ L+  F KN    E  EL ++MV   + PD 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 639 QTYNAIISPL 648
            TY+++I+ L
Sbjct: 296 VTYSSLINGL 305



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/192 (20%), Positives = 89/192 (46%), Gaps = 6/192 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C A    ++ L+    +    E    + +++  +G   +   +N  +    +  ++ +  
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + + +M   G   ++ T+N+++  LC   +LE+AL ++  M K  +  ++V +  +I   
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A  LF  + +     + P+ VT+  +++G C  G +   E +   M + G+ 
Sbjct: 446 CKTGKVEEAWSLFCSLSL---KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL- 501

Query: 322 CNVRTYATLIDG 333
             ++   TL DG
Sbjct: 502 --MKNDCTLSDG 511


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 219/416 (52%), Gaps = 4/416 (0%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDAL 152
           L S C ++H L   + F +A  L+  ++S     S       +L++    ++   VF  L
Sbjct: 1   LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           + A  + G    A +  +  +     V        L HL+KL      W  Y+E++ CGY
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++GDL+    
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG-- 178

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
            FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ TLID
Sbjct: 179 -FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 237

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD+  A  ++ +M  K + P
Sbjct: 238 GHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKP 297

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  +I+ LC+      A+++L
Sbjct: 298 DKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKML 357

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++  YN ++NG
Sbjct: 358 REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 160/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 173 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L+ A  L+     
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSM 292

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  +I+ LC+ G    
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVD 352

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M  +G  P   TYN +++
Sbjct: 353 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMN 412



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 158/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 128 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 187

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 188 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 247

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 248 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLID 307

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y +II+GLC++     A+ +L+    +GL  
Sbjct: 308 GCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKP 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  EM+  G   +   YN+L+N
Sbjct: 368 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMN 412



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 106 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 165

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 166 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 225

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G   QA  
Sbjct: 226 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHG 285

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y AIIS L 
Sbjct: 286 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLC 345

Query: 650 GEKSAED 656
            E    D
Sbjct: 346 QEGRPVD 352



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 1/255 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 53  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFY 112

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G+  D  TY+ LING     K+ +A  +F EM   G+  N V +
Sbjct: 173 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    K     +   L D+M +
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSM 292

Query: 632 SGVSPDNQTYNAIIS 646
            G+ PD  TY  +I 
Sbjct: 293 KGLKPDKFTYTTLID 307


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 244/483 (50%), Gaps = 7/483 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS + K+N+      L ++M + G   N+ T+++ I   C+  +L  AL++ 
Sbjct: 74  SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M+K G  P++V  N ++N  C    +  A+ L  +M  M      P++VT   +++G 
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG---YQPDTVTFTTLVHGL 190

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            +  +   A  +   M+  G   ++ TY  +I+G  + G  + AL L ++M K  +  + 
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V+YN+ I  L     ++ A  + + M  K I PD FTY+ L   LC  G    A +L + 
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGG 478
           +LE+++  D   +N LI+   K   L  A++L   M+  +   PD++ Y TLI G+CK  
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYN 537
            +E  ++V+  M +     N V Y ++I+G  +    D A+ + +     G+  D +TYN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            L++G   NG +  A  +F  M+   + ++ V Y  +I  LCK G  +   +L   + L 
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAE 655
           G+ P+ VTYTT+++ F +    EE   L  +M   G  P++ TYN +I   L  G+++A 
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550

Query: 656 DQV 658
            ++
Sbjct: 551 AEL 553



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 267/544 (49%), Gaps = 26/544 (4%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAY 166
           + DDA+ L G+++ +                   +  P++  F  L+ A  ++   +   
Sbjct: 55  KLDDAIGLFGDMVKS-------------------RPFPSIVEFSKLLSAIAKMNKFDLVI 95

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
            + ++++  G S +++ ++ F+++  + +++     +  +M+  GY  ++ T N ++   
Sbjct: 96  SLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF 155

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C   ++ EA++L  +M++ G  P+ V F  +++   Q      A+ L  +M V       
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV---KGCQ 212

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+ VT+  +ING CK G  + A  +   M K  I+ +V  Y T+IDG  +    ++A  L
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            ++M  +G+ P+   YN  I  L   G    A  +LSDM++K+I PD   ++ L     +
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332

Query: 407 NGCVKQAFKLHNQVLE-EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
            G + +A KL++++++ +H   D  +YN LI   CK   +    ++   M  RGL+ + +
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY TLI G+ +  + + A  V++ M      P+++ YN +++GLC + +++ A  + +  
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
           Q+  + LD +TY T+I      GK+ + + +F  +   G+  N V Y  +++  C+ G  
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           ++A  L   M   G +P+  TY TL+    ++       EL  +M   G + D  T+  +
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572

Query: 645 ISPL 648
            + L
Sbjct: 573 TNML 576



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 209/431 (48%), Gaps = 5/431 (1%)

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++ KL++A+ L+  M+KS  +P++V F+ +++   ++   +  + L  +M  +    +  
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG---ISH 108

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T++  IN FC+  ++  A  I   M+K G   ++ T  +L++G+  G    EA+ L 
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D+MV+ G  P+ V + + +H LF       A+ ++  M+ K   PD  TY  +  GLC+ 
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G    A  L N++ +  +  D   YN +I+ LCK  ++  A  L + M  +G+ PD+ TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--AS 525
             LI   C  G    A ++  +M +    P+LV +N++I+   K+  L  A+ L      
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            +    D + YNTLI G+    ++ E   +F EM   G+  N V Y  LI+   +     
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A+ + K M+  G+ PD +TY  L+     N + E  + + + M    +  D  TY  +I
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468

Query: 646 SPLLGEKSAED 656
             L      ED
Sbjct: 469 EALCKAGKVED 479



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 226/489 (46%), Gaps = 26/489 (5%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY----EI 141
           +N   SH+L +    ++      +   AL ++G +M       +  L  LL+ +     I
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161

Query: 142 CKATPAV--------------FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
            +A   V              F  LV    Q      A  +++++ VKG    +  +   
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           ++ L K  E      L  +M       +V  +N +I  LCK   +++A  L+ +M   GI
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            P+V  +N +I+  C  G    A +L   M      ++ P+ V  N +I+ F K G++  
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDM---LEKNINPDLVFFNALIDAFVKEGKLVE 338

Query: 308 AEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           AE++   M+K+   C  +V  Y TLI G+ +    EE + +  EM +RGL+ N V Y + 
Sbjct: 339 AEKLYDEMVKSK-HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           IH  F   D + A  V   M+   + PD  TY+IL  GLC NG V+ A  +   + +  M
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +Y  +I  LCK+  +     L  S+ ++G+ P+++TY T++ G+C+ G  E A  
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYF 544
           ++  MK+    PN   YN++I    +D    A+  L++  +  G   DA T+  L+    
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNML 576

Query: 545 INGKIAEAF 553
            +G++ ++F
Sbjct: 577 HDGRLDKSF 585


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 250/489 (51%), Gaps = 6/489 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A D+  K++ +G S +   ++  +    K  E+ +  + YK+M S G   +V   + +I 
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
              K  K EEAL L+    ++G+  NV   N I++  C+ G ++ A +L RKM       
Sbjct: 417 GWLKGQKHEEALKLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKM---ESRG 472

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + PN V++N ++   C+   ++ A  +   M++ G+  N  TY+ LIDG  +    +  L
Sbjct: 473 IGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVL 532

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID-KHICPDHFTYSILTKG 403
            + ++M    +  N VVY + I+ L   G    A  +L++MI+ K  C    +Y+ +  G
Sbjct: 533 EVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDG 592

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
             + G +  A   + ++    +  +  +Y  L++ LCK+N +  A ++   M  +G+  D
Sbjct: 593 FIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLD 652

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I  YG LI G+CK  N+E A  ++  + +    P+  +YNS+I+G     ++ AA  L +
Sbjct: 653 IPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYK 712

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
              + GL  D  TY TLI+G    G +  A  +++EM+ VG+  +++ Y +++N L K G
Sbjct: 713 KMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKG 772

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
            + +  ++ + M  + + P+ + Y  ++    +  + +E   LHD+M+  G+ PD  T++
Sbjct: 773 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 832

Query: 643 AIISPLLGE 651
            ++S  +G+
Sbjct: 833 ILVSGKVGK 841



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 172/689 (24%), Positives = 307/689 (44%), Gaps = 65/689 (9%)

Query: 11  KSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQR-----KWKILEQMAPSLTNSLVNR 65
           ++N P        ++  NPS E    R +C +  +      K  +L        ++ V  
Sbjct: 20  RNNKPFCSQSRFPQESENPSQEQ---RLVCGSTSEENPVTSKVSLLAAKPEQKDDASVID 76

Query: 66  VVSEFRKSPKLALEFYTWVGENNRFSHSLESS---CAIVHLLVN----WRRFDDALLLMG 118
           V+   R +P+ AL FY W      +  S E       ++H+LV     + R  D L+   
Sbjct: 77  VLLNRRNNPEAALRFYNWA---RPWRGSFEDGDVFWVLIHILVTSPETYGRASDLLI--- 130

Query: 119 NLMSANSVSPLE--FLEGLLDSYEIC--KATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
             +S ++ +P+    +  L+DS ++   +     F+ L+ A ++   T+ A D++ ++  
Sbjct: 131 RYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLE 190

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G    +   N  LS LV+ N I    +LY  MV+ G   +  T  L++ A  +E K  E
Sbjct: 191 LGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAE 250

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           AL ++ R ++ G  P+ + +++ +   C+  +L  A  L R+M        +P+  T+  
Sbjct: 251 ALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMK--EKKLCVPSQETYTS 308

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I    K G +E A   +  M+  GI  NV    +LI G+ +      AL L  +M   G
Sbjct: 309 VILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEG 368

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             PN+V ++  I      G++E AL     M    + P  F    + +G  +    ++A 
Sbjct: 369 PSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEAL 428

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           KL ++  E  +  + +  N ++++LCK   +  A +LL  M  RG+ P++++Y  ++  +
Sbjct: 429 KLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAH 487

Query: 475 CKGGNIEGAVQVYENMKKVEKKP-----------------------------------NL 499
           C+  N++ A  V+ NM +   KP                                   N 
Sbjct: 488 CRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNG 547

Query: 500 VIYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           V+Y +IINGLCK      A+ LL     ++   +  ++YN++I+G+   G++  A A + 
Sbjct: 548 VVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYE 607

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           EM   GI+ N + Y  L++ LCK     QA E+   M   G+  D   Y  L+  F K  
Sbjct: 608 EMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKS 667

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + E    L  +++  G++P    YN++IS
Sbjct: 668 NMESASALFSELLEEGLNPSQPVYNSLIS 696



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 243/501 (48%), Gaps = 36/501 (7%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVN-W 107
           +E   PS  +   + ++  F K+ ++  ALEFY  +      S  L  S   VH ++  W
Sbjct: 364 MENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKME-----SLGLTPSVFHVHTIIQGW 418

Query: 108 ---RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
              ++ ++AL L              F  GL + + IC         L   C Q G  + 
Sbjct: 419 LKGQKHEEALKLFDE----------SFETGLANVF-ICNTI------LSWLCKQ-GKIDK 460

Query: 165 AYDVIQKLKVKGHSVSIHAWNN-FLSHLVKLN-EIGRFWKLYKEMVSCGYVENVNTFNLV 222
           A ++++K++ +G   ++ ++NN  L+H  K N ++ R   ++  M+  G   N  T++++
Sbjct: 461 ATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLAR--TVFSNMLEKGLKPNNYTYSIL 518

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I    K    +  L +  +M  S I  N V +  IIN  C+VG    A +L   M  +  
Sbjct: 519 IDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM--IEE 576

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
                + +++N II+GF K G +++A      M   GI  NV TY +L+DG  +    ++
Sbjct: 577 KRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQ 636

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           AL + DEM  +G+  +   Y + IH    + ++E A  + S+++++ + P    Y+ L  
Sbjct: 637 ALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLIS 696

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G    G +  A  L+ ++L++ +  D  +Y  LI+ L K  NL  A  L + M   GL+P
Sbjct: 697 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVP 756

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D I Y  +++G  K G     V+++E MKK    PN++IYN++I G  ++ +LD A  L 
Sbjct: 757 DEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLH 816

Query: 523 QASQRIGLL-DAITYNTLING 542
                 G+L D  T++ L++G
Sbjct: 817 DEMLDKGILPDGATFDILVSG 837



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 189/409 (46%), Gaps = 14/409 (3%)

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G   N   FN ++N   +    ++A+ +  +M  +    V+P     N  ++   +   +
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELG---VIPFVPYVNRTLSALVQRNSI 213

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A+E+   M+  G+D +  T   L+    R     EAL +    ++RG  P++++Y+  
Sbjct: 214 TEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLA 273

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
           +       ++  A  +L +M +K +C P   TY+ +     + G ++ A +  ++     
Sbjct: 274 VQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDE----- 328

Query: 425 MVGDAYSYNI-----LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           MV D  S N+     LI   CK+N+L +A  L   M   G  P+ +T+  LI+ + K G 
Sbjct: 329 MVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGE 388

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
           +E A++ Y+ M+ +   P++   ++II G  K    + A  L   S   GL +    NT+
Sbjct: 389 MEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTI 448

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           ++     GKI +A  +  +M + GI  N V YN ++   C+      AR +   M+  G+
Sbjct: 449 LSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGL 508

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            P+  TY+ L+    KN   + V+E+ + M  S +  +   Y  II+ L
Sbjct: 509 KPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGL 557



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 3/246 (1%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  + NQ+LE  ++      N  ++ L + N++  AK+L S M+  G+  D  T   L+ 
Sbjct: 181 AVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMR 240

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGL 530
              +      A++V+    +   +P+ ++Y+  +   CK  +L  A SLL+    +++ +
Sbjct: 241 ASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCV 300

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
               TY ++I      G + +A     EM + GI++N V    LI   CK      A +L
Sbjct: 301 PSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDL 360

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL- 649
              M   G  P+ VT++ L+ RFSKN   E+ +E +  M   G++P     + II   L 
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420

Query: 650 GEKSAE 655
           G+K  E
Sbjct: 421 GQKHEE 426


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 246/515 (47%), Gaps = 32/515 (6%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           LE++AP L++ +VN V+ E R+ P+L   F+ W      F  S  +   ++ +L     F
Sbjct: 55  LEKLAPFLSSEIVNDVMREQRR-PELGFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGF 112

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           D    ++  L ++N   P                 P  F  L+ A  + G  E A +   
Sbjct: 113 DTYWKILEELKNSNIQIP-----------------PPTFSVLIAAYAKSGMAEKAVESFG 155

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K+K  G    +  +N+ L  +V+         +Y +M+   Y  N  TF +++  LCK  
Sbjct: 156 KMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNG 215

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K ++AL ++  M + GI PN + + +I++  CQ    +   +L   M V SG    P+S+
Sbjct: 216 KTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKV-SG--CCPDSI 272

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +++GFCKLG+++ A  +     K G    ++ Y++LIDG  R    +E    C +M
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM 332

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            K G+ P+ V+Y   I      G V+ AL +L+DM  + + PD + Y+ L KG C  G +
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A  L  ++ +      + +Y ILI  +C++  L  A+Q+ + M   G  P I+T+  L
Sbjct: 393 DKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS--------IINGLCK-DASLDAAKSL 521
           IDG CK G +E A  ++  M ++ K P+L +  S          NG  + D   DA + L
Sbjct: 453 IDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVL 511

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
            Q  +      +  Y  L+      GK++ AF+++
Sbjct: 512 DQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW 546



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 206/437 (47%), Gaps = 11/437 (2%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T NLVI  L K+   +    +   +  S I      F+++I    + G  E A++ F   
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESF--- 154

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           G M      P+  T+N I++   +      A  +   M+K   + N  T+  L++G  + 
Sbjct: 155 GKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKN 214

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G +++AL++ DEM ++G+ PN ++Y   +  L      +    +L+ M     CPD  T 
Sbjct: 215 GKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITC 274

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L  G C+ G + +AF L     +E  V     Y+ LI+ L ++      ++    M  
Sbjct: 275 NALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFK 334

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            G+ PD++ Y  LI G+C+ G ++ A+ +  +M +    P+   YN++I G C    LD 
Sbjct: 335 AGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394

Query: 518 AKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A+SL L+ S+      + TY  LI G   NG + EA  +F++M N+G + + + +N LI+
Sbjct: 395 ARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALID 454

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR-------FSKNCSPEEVIELHDDM 629
            LCK G  ++AR L   M +      ++  +    R       F +    E+   + D M
Sbjct: 455 GLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQM 514

Query: 630 VLSGVSPDNQTYNAIIS 646
           V +G +P +  Y  +++
Sbjct: 515 VKNGCTPSSAVYKCLMT 531



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 175/360 (48%), Gaps = 1/360 (0%)

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VTHN +I+   K    +   +I   +  + I     T++ LI  YA+ G +E+A+    +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M   G  P+   YNS +H +  +     AL V + M+  +  P+  T+ IL  GLC+NG 
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
              A K+ +++ ++ +  +   Y I+++ LC++       +LL++M V G  PD IT   
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L+DG+CK G I+ A  + +  +K      +  Y+S+I+GL +    D  +   +   + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D + Y  LI G+   G +  A  M ++M   G++ +   YN LI   C  G   +AR
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   +  +   P   TYT L+    +N   +E  ++ + M   G SP   T+NA+I  L
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/476 (22%), Positives = 207/476 (43%), Gaps = 51/476 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  ++    Q   T+  + ++  +KV G        N  L    KL +I   + L +  
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLF 297

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              GYV  +  ++ +I  L +  + +E      +M K+GI P+VV + ++I   C+VG +
Sbjct: 298 EKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMV 357

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           ++AL +   M   +   + P++  +N +I GFC +G ++ A  ++  + K        TY
Sbjct: 358 DYALNMLNDM---TQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTY 414

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G  R G  +EA ++ ++M   G  P+ + +N+ I  L   G++E A  +   M  
Sbjct: 415 TILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-- 472

Query: 388 KHICPDHFTYSILTKGLCR-----NGCVK-----QAFKLHNQVLEEHMVGDAYSYNILIN 437
             I  +   +  L++G  R     NG  +      AF++ +Q+++      +  Y  L+ 
Sbjct: 473 -EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMT 531

Query: 438 YLCKSNNLAAAKQL----LSSM----------------------IVRGLIP--------D 463
           + C+   L+ A  L    L S+                       VR L+         +
Sbjct: 532 WSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFE 591

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I  Y   + G C+    E A++++  +K+ +   N      +INGLCKD +L+ A  +  
Sbjct: 592 IAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFL 651

Query: 524 ASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            +   G +L     N L+    +  K+  A  + + M + G  +++  ++ + ++L
Sbjct: 652 YTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYL 707


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 243/499 (48%), Gaps = 6/499 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+RA    G    A  V   +  +G S S+  ++  L    K +   +   L  EM
Sbjct: 164 TFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM 223

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            + G   ++ T+N++I A+C E  ++EAL++   +   G  P+ V +  ++   C     
Sbjct: 224 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERW 283

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +   +LF +M   + +   P+ VT N I+   C+ G V+ A ++   M + G   ++ TY
Sbjct: 284 KEVEELFAEM---ASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTY 340

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           ++++DG    G  ++A+ L   +   G  P+ + Y + +  L +    E A  ++++M+ 
Sbjct: 341 SSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVC 400

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  T++ +   LC+ G V +A K+  Q+ E     D  +YN +I+ LC    +  
Sbjct: 401 SDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +LLS++   G  PDI+T+ TL+ G C     E A Q+  NM   +  P+   +N++I 
Sbjct: 461 AMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVIT 520

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LC+   L  A   L+     G + +  TYN +++     GK  EA  + S M N     
Sbjct: 521 SLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TP 578

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + + YN +I+ + K G  ++A +L++VM+ +G+ PD +TY +L     +    +  I + 
Sbjct: 579 DLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML 638

Query: 627 DDMVLSGVSPDNQTYNAII 645
             +   G+SPD   YN I+
Sbjct: 639 CRLQDMGLSPDATFYNDIL 657



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 214/430 (49%), Gaps = 10/430 (2%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I  LC   ++ +A  ++  +   G    VV +N ++N  C+ G +E A +L      
Sbjct: 102 NILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRL------ 152

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +SG    P++ T N +I   C  GRV  A  +   M+  G   +V TY+ L+D   +   
Sbjct: 153 ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASG 212

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A+ L DEM  +G  P+ V YN  I+ +  EGDV+ AL +LSD+      PD  TY+ 
Sbjct: 213 YRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTP 272

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           + K LC +   K+  +L  ++       D  ++N ++  LC+   +  A +++  M   G
Sbjct: 273 VLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHG 332

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            IPDI+TY +++DG C  G ++ AV++   +K    KP+ + Y +++ GLC     + A+
Sbjct: 333 CIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAE 392

Query: 520 SLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L+ +        D +T+NT+I      G +  A  +  +M   G   + V YN +I+ L
Sbjct: 393 ELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGL 452

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C   C   A EL+  +  +G  PD VT+ TL+         E+  +L  +M+ S   PD 
Sbjct: 453 CNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDA 512

Query: 639 QTYNAIISPL 648
            T+N +I+ L
Sbjct: 513 TTFNTVITSL 522



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 229/500 (45%), Gaps = 4/500 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  +   +  L+ A  +      A  ++ +++ KG    I  +N  ++ +    ++    
Sbjct: 193 CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEAL 252

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +  ++ S G   +  T+  V+ +LC   + +E   L+  M  +   P+ V FN I+   
Sbjct: 253 NILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSL 312

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G ++ A+K+      MS    +P+ VT++ I++G C +GRV+ A E+   +   G  
Sbjct: 313 CQQGLVDRAIKVVDH---MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 369

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +   Y T++ G       E A  L  EMV     P+ V +N+ I  L  +G V+ A+ V
Sbjct: 370 PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKV 429

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M +    PD  TY+ +  GLC   C+  A +L + +       D  ++N L+  LC 
Sbjct: 430 VEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCS 489

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
            +    A+QL+ +M+     PD  T+ T+I   C+ G +  A++  + M +    PN   
Sbjct: 490 VDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQST 549

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YN +++ L K      A  LL      G  D ITYNT+I+     GK+ EA  +   M +
Sbjct: 550 YNIVVDALLKAGKTQEALKLLSGMTN-GTPDLITYNTVISNITKAGKMEEALDLLRVMVS 608

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G++ + + Y  L   +C+     +A  ++  +   G+ PD   Y  ++  F +N   + 
Sbjct: 609 NGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDI 668

Query: 622 VIELHDDMVLSGVSPDNQTY 641
            I+    MV SG  PD  TY
Sbjct: 669 AIDCFAHMVSSGCMPDESTY 688



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 193/397 (48%), Gaps = 9/397 (2%)

Query: 263 QVGDLEFALKLFRKM--GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
           Q  +++ AL L   +  G  SG  +    V  N +I   C  GRV  AE + +A +  G 
Sbjct: 70  QREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERV-FATL--GA 126

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              V TY T+++GY R G  E+A RL   M      P+   +N  I  L   G V  AL 
Sbjct: 127 SATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDALA 183

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V  DM+ +   P   TYSIL    C+    +QA  L +++  +    D  +YN+LIN +C
Sbjct: 184 VFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMC 243

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
              ++  A  +LS +   G  PD +TY  ++   C     +   +++  M   +  P+ V
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV 303

Query: 501 IYNSIINGLCKDASLDAA-KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
            +N+I+  LC+   +D A K +   S+   + D +TY+++++G    G++ +A  + S +
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL 363

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           ++ G   + + Y  ++  LC    ++ A ELM  M+     PD VT+ T++    +    
Sbjct: 364 KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLV 423

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  I++ + M  +G +PD  TYN+II  L  E+  +D
Sbjct: 424 DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD 460



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 227/485 (46%), Gaps = 6/485 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++ L+ A    G  + A +++  L   G       +   L  L          
Sbjct: 228 CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 287

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+ EM S     +  TFN ++ +LC++  ++ A+ +   M + G  P++V ++ I++  
Sbjct: 288 ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C VG ++ A++L  ++         P+++ +  ++ G C + + E AEE+   M+ +   
Sbjct: 348 CDVGRVDDAVELLSRLKSYG---CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP 404

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T+ T+I    + G  + A+++ ++M + G  P+ V YNS I  L  E  ++ A+ +
Sbjct: 405 PDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMEL 464

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           LS++      PD  T++ L KGLC     + A +L   ++      DA ++N +I  LC+
Sbjct: 465 LSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQ 524

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A + L  M   G IP+  TY  ++D   K G  + A+++   M      P+L+ 
Sbjct: 525 KGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM--TNGTPDLIT 582

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN++I+ + K   ++ A  LL+     GL  D ITY +L  G         A  M   ++
Sbjct: 583 YNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQ 642

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           ++G++ +   YN ++   C+      A +    M+  G +PD  TY  L+   +  C  +
Sbjct: 643 DMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLD 702

Query: 621 EVIEL 625
           E  +L
Sbjct: 703 EAKQL 707



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 204/433 (47%), Gaps = 17/433 (3%)

Query: 231 KLEEALSLYYRMLKSG------IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
           ++++AL+L   +   G        P V C N++I   C  G +  A ++F  +G  +   
Sbjct: 73  EIDDALALVDSIASGGGSGKCLPLPVVPC-NILIKRLCSGGRVADAERVFATLGASA--- 128

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
                VT+N ++NG+C+ GR+E A  +   M       +  T+  LI      G   +AL
Sbjct: 129 ---TVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRVPDAL 182

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            + D+M+ RG  P+ V Y+  +           A+ +L +M  K   PD  TY++L   +
Sbjct: 183 AVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAM 242

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C  G V +A  + + +       DA +Y  ++  LC S      ++L + M      PD 
Sbjct: 243 CNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDE 302

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +T+ T++   C+ G ++ A++V ++M +    P++V Y+SI++GLC    +D A  LL  
Sbjct: 303 VTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            +  G   D I Y T++ G     +   A  + +EM       ++V +N +I  LC+ G 
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A ++++ M  +G  PD VTY +++         ++ +EL  ++   G  PD  T+N 
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482

Query: 644 IISPLLGEKSAED 656
           ++  L      ED
Sbjct: 483 LLKGLCSVDRWED 495



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 178/385 (46%), Gaps = 5/385 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +++     +G  + A +++ +LK  G      A+   L  L  + +     +L  EM
Sbjct: 339 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEM 398

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V      +  TFN VI +LC++  ++ A+ +  +M ++G  P++V +N II+  C    +
Sbjct: 399 VCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCI 458

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A++L   +         P+ VT N ++ G C + R E AE++   M+ +    +  T+
Sbjct: 459 DDAMELLSNL---QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I    + G   +A+     M + G +PN   YN  +  L   G  + AL +LS M +
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN 575

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
               PD  TY+ +   + + G +++A  L   ++   +  D  +Y  L   +C+ +    
Sbjct: 576 GT--PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A ++L  +   GL PD   Y  ++ G+C+    + A+  + +M      P+   Y  ++ 
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLE 693

Query: 508 GLCKDASLDAAKSLLQASQRIGLLD 532
            L  +  LD AK LL     +G+LD
Sbjct: 694 ALAYECLLDEAKQLLVNLCSLGVLD 718



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 23/381 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGL--LDSYE---------ICK 143
           +I+  L +  R DDA+ L+  L S     ++++    L+GL  ++ +E         +C 
Sbjct: 342 SILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCS 401

Query: 144 ATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
             P     F+ ++ +  Q G  + A  V++++   G +  I  +N+ +  L     I   
Sbjct: 402 DCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDA 461

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +L   + S G   ++ TFN ++  LC   + E+A  L   M+ S   P+   FN +I  
Sbjct: 462 MELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITS 521

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            CQ G     L+    + +M+ +  +PN  T+N +++   K G+ + A ++   M     
Sbjct: 522 LCQKG---LLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTP 578

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           D  + TY T+I    + G  EEAL L   MV  GL P+ + Y S  + +  E   + A+ 
Sbjct: 579 D--LITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIR 636

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L  + D  + PD   Y+ +  G C+N     A      ++    + D  +Y IL+  L 
Sbjct: 637 MLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALA 696

Query: 441 KSNNLAAAKQLLSSMIVRGLI 461
               L  AKQLL ++   G++
Sbjct: 697 YECLLDEAKQLLVNLCSLGVL 717



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL K LC  G V  A ++   +     V    +YN ++N  C++  +  A++L+S M   
Sbjct: 103 ILIKRLCSGGRVADAERVFATLGASATV---VTYNTMVNGYCRAGRIEDARRLISGM--- 156

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
              PD  T+  LI   C  G +  A+ V+++M      P++V Y+ +++  CK +    A
Sbjct: 157 PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA 216

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL   +  G   D +TYN LIN     G + EA  + S++ + G   + V Y  ++  
Sbjct: 217 MVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKS 276

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LC    +++  EL   M  +   PD VT+ T+VT   +    +  I++ D M   G  PD
Sbjct: 277 LCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPD 336

Query: 638 NQTYNAIISPLLGEKSAEDQV 658
             TY++I+  L      +D V
Sbjct: 337 IVTYSSILDGLCDVGRVDDAV 357



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 23/281 (8%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGL--LDSYEI----------- 141
           +I+  L N R  DDA+ L+ NL S     + V+    L+GL  +D +E            
Sbjct: 447 SIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS 506

Query: 142 -CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
            C      F+ ++ +  Q G    A + ++ +   G   +   +N  +  L+K  +    
Sbjct: 507 DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            KL   M +     ++ T+N VI  + K  K+EEAL L   M+ +G+ P+ + +  +   
Sbjct: 567 LKLLSGMTN--GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYG 624

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+    + A+++  ++  M    + P++  +N I+ GFC+  R + A +    M+ +G 
Sbjct: 625 ICREDGTDRAIRMLCRLQDMG---LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGC 681

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
             +  TY  L++  A     +EA +L   +   G++  +++
Sbjct: 682 MPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDKSLI 722


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 240/521 (46%), Gaps = 68/521 (13%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L   E  K    +++ ++ A  Q  + + +     ++  KG     + +NN L+ +V  +
Sbjct: 84  LTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSS 143

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
              ++W  + E      V +V +F +VI   C+  ++E++  L   + + G  PNVV + 
Sbjct: 144 SFNQWWCFFNE-SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYT 202

Query: 256 MIINEACQVGDLEFALKLFRKMGV--------------------------------MSGD 283
            +I+  C+ G++E A  LF +MG                                 M   
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH 262

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V PN  T+NC++N  CK GR + A ++   M + G+ CN+ TY TLI G  R   + EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            ++ D+M    + PN + YN+ I    + G +  AL +  D+  + + P   TY++L  G
Sbjct: 323 NKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSG 382

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            CR G    A K+  ++ E  +     +Y ILI+   +S+N+  A QL SSM   GL+PD
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPD 442

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           + TY  LI G+C  G +  A +++++M +   +PN VIYN++I G CK+ S         
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGS--------- 493

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            S R                        A  +F +M    +A N   Y+ LI  LCK   
Sbjct: 494 -SYR------------------------ALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            ++A +L++ MI  GI P   T   L++R   +    ++I+
Sbjct: 529 LKEAEDLVEKMIDSGIDPS-DTICNLISRAKTDSPVAQIID 568



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 221/445 (49%), Gaps = 11/445 (2%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EMV  G+V   N FN ++  +       +    ++   K  +  +V  F ++I   C+
Sbjct: 117 FNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC-FFNESKIKVVLDVYSFGIVIKGCCE 175

Query: 264 VGDLEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            G++E +  L    R+ G        PN V +  +I+G CK G +E A+++ + M K G+
Sbjct: 176 AGEIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY  LI G  + G  ++   + ++M + G+ PN   YN  ++ L  +G  + A  
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFK 289

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V  +M ++ +  +  TY+ L  GLCR     +A K+ +Q+    +  +  +YN LI+  C
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFC 349

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
               L  A  L   +  RGL P ++TY  L+ G+C+ G+  GA ++ + M++   KP+ V
Sbjct: 350 SVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  +I+   +  +++ A  L  + + +GL+ D  TY+ LI+G+ I G++ EA  +F  M
Sbjct: 410 TYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               +  N+V YN +I   CK G   +A  L + M    + P+  +Y+ L+    K    
Sbjct: 470 VEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKL 529

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAI 644
           +E  +L + M+ SG+ P +   N I
Sbjct: 530 KEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 213/444 (47%), Gaps = 8/444 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           + ++I A  +   L+ ++  +  M+  G  P   CFN ++               F +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +     V+ +  +   +I G C+ G +E + ++   + + G   NV  Y TLIDG  + G
Sbjct: 157 I----KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E+A  L  EM K GL+ N   Y   IH LF  G  +    +   M +  + P+ +TY+
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYN 272

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            +   LC++G  K AFK+ +++ E  +  +  +YN LI  LC+      A +++  M   
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSY 332

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            + P++ITY TLIDG+C  G +  A+ +  ++K     P+LV YN +++G C+      A
Sbjct: 333 VINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGA 392

Query: 519 KSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +++  +  G+  + +TY  LI+ +  +  +  A  + S M  +G+  +   Y++LI+ 
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHG 452

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C  G   +A  L K M+   + P+ V Y T++  + K  S    + L  DM    ++P+
Sbjct: 453 FCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPN 512

Query: 638 NQTYNAIISPLLGE---KSAEDQV 658
             +Y+ +I  L  E   K AED V
Sbjct: 513 VASYSYLIRVLCKERKLKEAEDLV 536



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 170/357 (47%), Gaps = 37/357 (10%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R Y  +I+ Y +  S + ++   +EMV +G +P +  +N+ + ++             ++
Sbjct: 95  RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE 154

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
              K +  D +++ I+ KG C  G ++++F L  ++ E     +   Y  LI+  CK   
Sbjct: 155 SKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE 213

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  AK L   M   GL+ +  TY  LI G  K G  +   ++YE M++    PNL  YN 
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNC 273

Query: 505 IINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNTLING-------------------YF 544
           ++N LCKD  + DA K   +  +R    + +TYNTLI G                   Y 
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYV 333

Query: 545 IN----------------GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           IN                GK+ +A ++  ++++ G++ + V YN+L++  C+ G    A 
Sbjct: 334 INPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAA 393

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +++K M   GI P  VTYT L+  F+++ + E  I+L   M   G+ PD  TY+ +I
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLI 450



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 109/238 (45%), Gaps = 15/238 (6%)

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           QV+   +    ++ + L++YL +S       +L               Y  +I+ Y +  
Sbjct: 64  QVISGKIQSQFFTSSSLLHYLTESETSKTKSRL---------------YEVIINAYVQSQ 108

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
           +++ ++  +  M      P    +N+++  +   +S +        S+   +LD  ++  
Sbjct: 109 SLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGI 168

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G    G+I ++F +  E+R  G + N V Y  LI+  CK G  ++A++L   M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++ +  TYT L+    KN   ++  E+++ M   GV P+  TYN +++ L  +   +D
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKD 286


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/541 (29%), Positives = 256/541 (47%), Gaps = 20/541 (3%)

Query: 72  KSPKL-ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL- 129
           KSP L AL  +T         H+ +S   I+HLL++   F  +  L+  L+S    S   
Sbjct: 3   KSPPLKALSLFTSSALQGX-QHTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSF 61

Query: 130 -------EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
                  E  +  LDS+        + +A++ A  +    E A     ++  +G     +
Sbjct: 62  TPSSLFHELTQPHLDSF---PTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSN 118

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYR 241
            +NN L  L+K N   + W+++ E  + G V+ +V +F ++I   C+   L++   +  +
Sbjct: 119 TFNNLLILLIKSNFFEKAWRVFNE--TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQ 176

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M + G+ PNVV +  +I+  C+ GD+E   +LF KMG +    V+ N  T+  +INGF K
Sbjct: 177 MEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL---DVVANQYTYTVLINGFFK 233

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G  +   E+   M   GI  NV TY ++I      G    A  L DEM +RG+  N V 
Sbjct: 234 MGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 293

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I  L  E  V  A  ++  M    + P+  +Y+ L  G C  G + +A  L NQ+ 
Sbjct: 294 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 353

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                    +YNILI    ++ N A    ++  M  RGL P  +TY  L+D   +  NIE
Sbjct: 354 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIE 413

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A Q+Y +M+K     ++ IY  +I+GLC    +  A  L ++   + L  + + YNT+I
Sbjct: 414 KAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMI 473

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            GY   G    A  +  EM   G+  N   YN  I  LCK   + +A  L+K MI  G+ 
Sbjct: 474 YGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLK 533

Query: 601 P 601
           P
Sbjct: 534 P 534



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 215/440 (48%), Gaps = 5/440 (1%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +M+  G V   NTFN ++  L K    E+A  ++    K  +  +V  F ++I   C+VG
Sbjct: 107 QMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVG 165

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            L+   K F  +G M    + PN V +  +I+G CK G +E  +++ Y M +  +  N  
Sbjct: 166 YLD---KGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQY 222

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  LI+G+ + G  ++ + L ++M   G++PN   YNS I     +G +  A  +  +M
Sbjct: 223 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 282

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            ++ +  +  TY+ L  GLC+   V +A +L  ++  + +  +  SYN LI+  C   NL
Sbjct: 283 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNL 342

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L + M   G  P + TY  LI G+ +  N  G   +   M+     P+ V Y  +
Sbjct: 343 DKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTIL 402

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ++ L +  +++ A  +  + ++ GL+ D   Y  LI+G  + G + EA  +F  +  + +
Sbjct: 403 MDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHL 462

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N V YN +I   CK G   +A  L+K M  +G++P+  +Y + +    K+    E   
Sbjct: 463 KPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEV 522

Query: 625 LHDDMVLSGVSPDNQTYNAI 644
           L  DM+  G+ P    +N I
Sbjct: 523 LLKDMIELGLKPSISIWNMI 542



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 204/399 (51%), Gaps = 4/399 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  +++ C ++G  +  ++V+ +++  G S ++  +   +    K  +I R  +L+ +M 
Sbjct: 154 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 213

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
               V N  T+ ++I    K    ++ + LY +M  +GI PNV  +N +I   C  G L 
Sbjct: 214 ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN 273

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A +LF +M       V  N VT+N +I G C+  RV  AE +   M + G+  N+ +Y 
Sbjct: 274 NAFELFDEM---RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 330

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLIDGY   G+ ++A  L ++M   G  P+   YN  I       +  G   ++ +M  +
Sbjct: 331 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 390

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P   TY+IL   L R+  +++AF++++ + +  +V D Y Y +LI+ LC   ++  A
Sbjct: 391 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 450

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +L  S+    L P+ + Y T+I GYCK G+   A+++ + M +    PN+  YNS I  
Sbjct: 451 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXI 510

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFIN 546
           LCKD     A+ LL+    +GL  +I+ +N +    F N
Sbjct: 511 LCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 549



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 3/321 (0%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    +  L+    ++G  +   ++ +K+K+ G   +++ +N+ +       ++   ++L
Sbjct: 219 ANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFEL 278

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EM   G   NV T+N +I  LC+E ++ EA  L  RM + G+ PN++ +N +I+  C 
Sbjct: 279 FDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCS 338

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G+L+ A  LF +M   SG S  P+  T+N +I GF +        ++   M   G+  +
Sbjct: 339 IGNLDKASSLFNQMKS-SGQS--PSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPS 395

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY  L+D   R  + E+A ++   M K GL+ +  +Y   IH L   GD++ A  +  
Sbjct: 396 KVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFK 455

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            + + H+ P+   Y+ +  G C+ G   +A +L  ++ E  MV +  SYN  I  LCK  
Sbjct: 456 SLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDE 515

Query: 444 NLAAAKQLLSSMIVRGLIPDI 464
               A+ LL  MI  GL P I
Sbjct: 516 KWTEAEVLLKDMIELGLKPSI 536



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 163/334 (48%), Gaps = 2/334 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V  +  +I+ + R    E+AL   ++M+ RGL+P +  +N+ +  L      E A  V 
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           ++    ++  D +++ I+ KG C  G + + F++  Q+ E  +  +   Y  LI+  CK+
Sbjct: 141 NE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            ++   KQL   M    ++ +  TY  LI+G+ K G  +  +++YE MK     PN+  Y
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NS+I   C D  L+ A  L    +  G+  + +TYNTLI G     ++ EA  +   M+ 
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G++ N + YN LI+  C  G   +A  L   M   G  P   TY  L+  FS+  +   
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 379

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           V ++  +M   G+SP   TY  ++  L+   + E
Sbjct: 380 VTDMVREMEARGLSPSKVTYTILMDALVRSDNIE 413



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 187/416 (44%), Gaps = 38/416 (9%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M G  ++P S T N ++    K    E A  + +   K  +  +V ++  +I G    G 
Sbjct: 108 MIGRGLVPGSNTFNNLLILLIKSNFFEKAWRV-FNETKGNVKLDVYSFGIMIKGCCEVGY 166

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            ++   +  +M + GL PN VVY + I      GD+E    +   M +  +  + +TY++
Sbjct: 167 LDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTV 226

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G  + G  K   +L+ ++    +V + Y+YN +I   C    L  A +L   M  RG
Sbjct: 227 LINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 286

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  +++TY TLI G C+   +  A ++   MK+    PNL+ YN++I+G C   +LD A 
Sbjct: 287 VACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKAS 346

Query: 520 SLL-----------------------QASQRIGLLD-------------AITYNTLINGY 543
           SL                        +A    G+ D              +TY  L++  
Sbjct: 347 SLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDAL 406

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
             +  I +AF ++S M   G+  +   Y +LI+ LC  G  ++A +L K +    + P+ 
Sbjct: 407 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPND 466

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL-GEKSAEDQV 658
           V Y T++  + K  S    + L  +M  +G+ P+  +YN+ I  L   EK  E +V
Sbjct: 467 VIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEV 522


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 168/580 (28%), Positives = 267/580 (46%), Gaps = 23/580 (3%)

Query: 51  LEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF 110
           LE++   L   +VN VV     S + A+ FY W      F HS  +   IV LL     F
Sbjct: 78  LERLDIELDPFVVNLVVRGLSDS-ETAVRFYWWAESRPGFDHSQFAIAYIVSLLFVDGNF 136

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV---FDALVRA-CTQIGATEGAY 166
                 +G + S            LL  Y       +V   FD +V + C + G     Y
Sbjct: 137 ALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRY 196

Query: 167 ----------DVIQKLK----VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
                     D+++K       KG  ++   ++ ++S L + N I    +L  +M   G+
Sbjct: 197 IGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGF 256

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             ++   N+ I  LCK+ +L +AL +  +M   G  P+VV +  ++   C       A+ 
Sbjct: 257 SPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVG 316

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           L+ +M  M    + P+ V    +I G CK  +VE A E+   M+   I+ +V  Y  LI 
Sbjct: 317 LWEEMVKMG---LKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALIS 373

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ R GS ++A  +   M   G  P  V YN  ++     G +E A  +++ M    + P
Sbjct: 374 GFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNP 433

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D ++Y+ L KGLC+   + +AF   +  +E     D  S NILI+  CK   + +A +L 
Sbjct: 434 DRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELF 493

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M  +G+  D +TYGTLI+G    G    A +++E M K +  PN+ +YN +++ LCK 
Sbjct: 494 KEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKV 553

Query: 513 ASLD-AAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             L  A K  L   Q+  L D +TYNTLI     N +  EA  +F +MR  G+  + + +
Sbjct: 554 GDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTF 613

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
             LIN L   G    A E+ + M+ +GII D      L++
Sbjct: 614 KYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLIS 653



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 217/481 (45%), Gaps = 6/481 (1%)

Query: 174 VKGHSVSIHA--WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           V+   V++H   +   LS  V+  +       + EMV  G  E    +N  I  L K C 
Sbjct: 146 VRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGIDYNRYIGVLIKNCC 205

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
            +     Y   L  G+      ++  I+  CQ   +E   +L   M         P+   
Sbjct: 206 FDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFS---PDIWA 262

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N  I+  CK  R+  A ++   M   G   +V TY T++          EA+ L +EMV
Sbjct: 263 CNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMV 322

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K GL P+ V   + I  L     VE A  + S M+  +I      Y+ L  G  R G + 
Sbjct: 323 KMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSID 382

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A+ + + +          +YNIL+N+ C    +  A+ L++ M   G+ PD  +Y  L+
Sbjct: 383 KAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLL 442

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
            G CK   ++ A     +  +V    ++V  N +I+  CK   + +A  L +     G+ 
Sbjct: 443 KGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQ 502

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            DA+TY TLING F  G    A  +F +M    I  N   YNI+++ LCK G  ++A+++
Sbjct: 503 ADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKI 562

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              MI   I+PD VTY TL+    KN    E ++L  DM   GV PD+ T+  +I+ LL 
Sbjct: 563 FLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLD 622

Query: 651 E 651
           E
Sbjct: 623 E 623



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 150/293 (51%), Gaps = 3/293 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           ++++AL+    + G+ + AY +I  ++  G    +  +N  L+H   +  + +   L  +
Sbjct: 366 SIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITK 425

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M + G   +  ++N ++  LCK  +L++A +     ++ G + ++V  N++I+  C+V  
Sbjct: 426 METSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKK 485

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ AL+LF++M       +  ++VT+  +ING   +G    AEE+   M+KA ID NV  
Sbjct: 486 VKSALELFKEMDY---KGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNL 542

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  ++    + G  + A ++   M+++ ++P+ V YN+ I+WL        AL +  DM 
Sbjct: 543 YNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMR 602

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            K + PD  T+  L  GL   G    A+++   ++E  ++ D      LI+ L
Sbjct: 603 TKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLISVL 655



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 1/223 (0%)

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +++ L    N A   + L ++  +G+      Y  L+ GY + G  +  +  ++ M    
Sbjct: 126 IVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSG 185

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            +   + YN  I  L K+   D  +     +   GL L   TY+  I+    + +I    
Sbjct: 186 CREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVE 245

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            + ++M   G + +    NI I+ LCK      A ++++ M   G IPD VTYTT+V   
Sbjct: 246 ELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCL 305

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             N    E + L ++MV  G+ PD     A+I  L      E+
Sbjct: 306 CNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEE 348


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 245/526 (46%), Gaps = 31/526 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             + L+      G  E A +V  K+ VKG   +  ++   +    +     R  +L   M
Sbjct: 153 TLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGM 212

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   N   +N +I + C+E + EEA  L  RM + G++P+VV FN  I+  C  G +
Sbjct: 213 GSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKI 272

Query: 268 EFALKLFRKMGVMSGDSVL----PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
             A ++FR M +   D  L    PN  T N ++ GFCK G +E A+ +  +M + G    
Sbjct: 273 LEASRIFRDMQI---DEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLME 329

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           + +Y   + G  R G   EA     EMV +G+ PN   +N+ +  L   G +  A  ++ 
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMG 389

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            MI   I PD  TYS L  G C  G V +A  + ++++      + Y+ NIL++ L K  
Sbjct: 390 LMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEG 449

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM------------- 490
            +  A++LL  M  R    D +T   +IDG CK G ++ AV++ E M             
Sbjct: 450 RIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGN 509

Query: 491 --------KKVEKK--PNLVIYNSIINGLCKDASLDAA-KSLLQASQRIGLLDAITYNTL 539
                       KK  P+L+ Y+ IINGLCK   LD A K  ++   +    D+I Y+T 
Sbjct: 510 SFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTF 569

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+ +  +GKI+ AF +  +M   G   +   YN LI  L       +   L+  M   GI
Sbjct: 570 IHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGI 629

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            P+  TY  +++   +    ++   L D+M+  G+SP+  ++  +I
Sbjct: 630 TPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLI 675



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 248/525 (47%), Gaps = 33/525 (6%)

Query: 151 ALVRACTQIGATEGAYDVIQKLK--VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           AL+R   + G ++ A+   Q  +  V  +   ++ +N  L   ++ +++  F  LYK+MV
Sbjct: 84  ALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMV 143

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G      T NL+I  LC   + E+A  ++ +M   G  PN   F +++   C+ G   
Sbjct: 144 VAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSM 203

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL+L   MG      V PN V +N +I+ FC+ GR E AE +   M + G+  +V T+ 
Sbjct: 204 RALELLDGMGSF---GVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFN 260

Query: 329 TLIDGYARGGSSEEALRLCDEMV---KRGL-MPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           + I      G   EA R+  +M    + GL  PN   +N  +     EG +E A  ++  
Sbjct: 261 SRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVES 320

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M       +  +Y+I   GL RNG + +A     +++++ +  + YS+N +++ LCK+  
Sbjct: 321 MKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGL 380

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           ++ A+ ++  MI  G+ PD +TY TL+ G C  G +  A  +   M +    PN    N 
Sbjct: 381 ISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNI 440

Query: 505 IINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +++ L K+  +  A+ LLQ  ++R   LD +T N +I+G   +GK+ EA  +   M   G
Sbjct: 441 LLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG 500

Query: 564 IAV-----------------------NKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            A                        + + Y+I+IN LCK G   +AR+    M+   + 
Sbjct: 501 SAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLH 560

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           PD + Y T +  F K+        +  DM   G +   QTYN++I
Sbjct: 561 PDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLI 605



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/522 (23%), Positives = 229/522 (43%), Gaps = 29/522 (5%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
             F+ ++    + G  E A  +++ +K  G+ + + ++N +L  LV+  ++       KE
Sbjct: 296 TTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKE 355

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G   N+ +FN V+  LCK   + +A  +   M+ SGI P+ V ++ +++  C  G 
Sbjct: 356 MVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK 415

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A  +  +M +  G S  PN+ T N +++   K GR+  AE++   M +   D +  T
Sbjct: 416 VLKANNILHEM-MRRGCS--PNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVT 472

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRG-----------------------LMPNNVVYN 363
              +IDG  + G  +EA+ + + M   G                        +P+ + Y+
Sbjct: 473 CNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYS 532

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             I+ L   G ++ A     +M+ K + PD   Y       C++G +  AF++   + + 
Sbjct: 533 IIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKR 592

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
                  +YN LI  L   N +     LL  M  +G+ P+I TY  +I   C+GG I+ A
Sbjct: 593 GCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDA 652

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGY 543
             + + M +    PN+  +  +I   CK +     K + + +  I       Y+ + N  
Sbjct: 653 TSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNEL 712

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
            I G+++EA  +F    +    +    YN LI  LCK    + A +++  MI  G   D 
Sbjct: 713 LIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDP 772

Query: 604 VTYTTLVTRFSKNCSPEEVIELHD---DMVLSGVSPDNQTYN 642
            ++  ++    K     +  EL +   DM   G+  +  T N
Sbjct: 773 ASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRN 814



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 1/153 (0%)

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAM 555
           P + +YN ++    ++  +D+   L +     G+  +  T N LI G   +G+  +A  +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           F +M   G   N+  + IL+   C+ G   +A EL+  M   G+ P+ V Y TL++ F +
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               EE   L + M   G+ PD  T+N+ IS L
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISAL 266



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%)

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           YN ++       K+     ++ +M   G++      N+LI  LC  G ++ ARE+   M 
Sbjct: 119 YNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMG 178

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           + G  P+  ++  LV  + +       +EL D M   GV P+   YN +IS    E   E
Sbjct: 179 VKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNE 238

Query: 656 D 656
           +
Sbjct: 239 E 239


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 246/507 (48%), Gaps = 10/507 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K TP  +  ++    +    +  + ++ ++K++    S  ++   L+         R  K
Sbjct: 70  KHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALK 129

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKEC--KLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++  +   G    V  +N ++ AL  E   K     ++Y  M   G+ PNV  +N+++  
Sbjct: 130 MFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKA 189

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G L+ A KL  +M   S    +P+ V++  ++   C+ GRVE A E+       G+
Sbjct: 190 LCKNGKLDGACKLLVEM---SKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV 246

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              V     LI G  R G   E   L DEMV  G+ PN V Y+S I WL   G+VE AL 
Sbjct: 247 ---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALA 303

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL  MI +   P+  T+S L KG    G V +   L   ++ E +  +   YN L+N LC
Sbjct: 304 VLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLC 363

Query: 441 KSNNLAAAKQLLSSMIVRGLI-PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            S NLA A  +   M       P++ TY TL+ G+ K G+++GA +V+  M     +PN+
Sbjct: 364 CSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNV 423

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSE 558
           V+Y S+++ LCK++  D A  L+      G    + T+NT I G    G++  A  +  +
Sbjct: 424 VVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQ 483

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M+  G   +   YN L++ L      ++A EL++ +    +  + VTY T++  FS +  
Sbjct: 484 MQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGK 543

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
            E V+++   M+++GV PD  T N +I
Sbjct: 544 EEWVLQVLGRMLVNGVKPDAITVNVVI 570



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 249/520 (47%), Gaps = 34/520 (6%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV--KLNEIGRFWKLYKEMVSCGYVENVN 217
           G  + A  +  ++K  G   ++  +N+ L  L+    N+      +Y+ M   G   NV 
Sbjct: 122 GLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVF 181

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N+++ ALCK  KL+ A  L   M K G  P+ V +  ++   C+ G +E A ++ R+ 
Sbjct: 182 TYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRF 241

Query: 278 GV-----------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           G                              M G+ V PN V+++ +I+    +G VE A
Sbjct: 242 GAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELA 301

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             +   MI+ G   NV T+++L+ GY  GG   E + L   MV  G+ PN VVYN+ ++ 
Sbjct: 302 LAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNG 361

Query: 369 LFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
           L   G++  A+ V   M     C P+  TYS L  G  + G ++ A ++ N+++   +  
Sbjct: 362 LCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRP 421

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +   Y  +++ LCK++    A +L+ +M   G  P ++T+ T I G C GG +  A++V 
Sbjct: 422 NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVV 481

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFIN 546
           + M++    P+   YN +++GL     L  A  L++   +R   L+ +TYNT++ G+  +
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSH 541

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM-KVMILHGIIPDYVT 605
           GK      +   M   G+  + +  N++I    K G  + A + + ++     + PD + 
Sbjct: 542 GKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIA 601

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +T+L+     +   EE I   + M+  G+ P+  T++ ++
Sbjct: 602 HTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLV 641



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 165/337 (48%), Gaps = 5/337 (1%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M   G++ NV TY  L+    + G  + A +L  EM KRG +P+ V Y + +  +  +G 
Sbjct: 171 MRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGR 230

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           VE A  V      + +       + L  GLCR G V + F L ++++   +  +  SY+ 
Sbjct: 231 VEEAREVARRFGAEGVVS---VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSS 287

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +I++L     +  A  +L  MI RG  P++ T+ +L+ GY  GG +   V ++  M    
Sbjct: 288 VISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEG 347

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEA 552
            +PN+V+YN+++NGLC   +L  A  +    ++      +  TY+TL++G+   G +  A
Sbjct: 348 VRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGA 407

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             ++++M N G+  N V Y  +++ LCK   + QA  L+  M   G  P  VT+ T +  
Sbjct: 408 SEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKG 467

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
                     + + D M   G  PD +TYN ++  L 
Sbjct: 468 LCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLF 504



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 210/451 (46%), Gaps = 22/451 (4%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +  +V A  + G  E A +V ++   +G    +   N  +  L +   +G  +
Sbjct: 211 CVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEG---VVSVCNALICGLCREGRVGEVF 267

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EMV  G   NV +++ VI  L    ++E AL++  +M++ G  PNV  F+ ++   
Sbjct: 268 GLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGY 327

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G +   + L+R   VM  + V PN V +N ++NG C  G +  A ++   M K   D
Sbjct: 328 FLGGRVGEGVGLWR---VMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEK---D 381

Query: 322 C----NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
           C    NV TY+TL+ G+ + G  + A  + ++MV  G+ PN VVY S +  L      + 
Sbjct: 382 CFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQ 441

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  ++ +M      P   T++   KGLC  G V  A ++ +Q+     + D  +YN L++
Sbjct: 442 AYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLD 501

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            L   N L  A +L+  +  R +  +++TY T++ G+   G  E  +QV   M     KP
Sbjct: 502 GLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKP 561

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-----LDAITYNTLINGYFINGKIAEA 552
           + +  N +I    K   L   ++ +Q   RI        D I + +L+ G   +  I EA
Sbjct: 562 DAITVNVVIYAYSK---LGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEA 618

Query: 553 FAMFSEMRNVGIAVNKVGYNILI-NFLCKFG 582
               ++M N GI  N   +++L+  F  K G
Sbjct: 619 IVYLNKMLNKGIFPNIATWDVLVRGFFKKLG 649



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 167/361 (46%), Gaps = 11/361 (3%)

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC----DE 349
           C++N +   G  + A ++ Y + + G    V+ Y  L+D  A  G S     +     + 
Sbjct: 113 CVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLD--ALLGESGNKFHMIGAVYEN 170

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M   G+ PN   YN  +  L   G ++GA  +L +M  +   PD  +Y+ +   +C +G 
Sbjct: 171 MRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGR 230

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V++A ++  +   E +V      N LI  LC+   +     L+  M+  G+ P++++Y +
Sbjct: 231 VEEAREVARRFGAEGVVSVC---NALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSS 287

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           +I      G +E A+ V   M +   +PN+  ++S++ G      +     L +     G
Sbjct: 288 VISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEG 347

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQQA 587
           +  + + YNTL+NG   +G +AEA  +   M ++     N   Y+ L++   K G  Q A
Sbjct: 348 VRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGA 407

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            E+   M+  G+ P+ V YT++V    KN   ++   L D+M   G  P   T+N  I  
Sbjct: 408 SEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKG 467

Query: 648 L 648
           L
Sbjct: 468 L 468



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 36/393 (9%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GL+D        P V  + +++   + +G  E A  V+ K+  +G   ++H +++ +   
Sbjct: 268 GLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGY 327

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI-WPN 250
                +G    L++ MV  G   NV  +N ++  LC    L EA+ +  RM K     PN
Sbjct: 328 FLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPN 387

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKM---GV---------------------------- 279
           V  ++ +++   + GDL+ A +++ KM   GV                            
Sbjct: 388 VTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLID 447

Query: 280 -MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            M+ D   P  VT N  I G C  GRV +A  +   M + G   + RTY  L+DG     
Sbjct: 448 NMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVN 507

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             +EA  L  E+ +R +  N V YN+ ++   + G  E  L VL  M+   + PD  T +
Sbjct: 508 ELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVN 567

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLE-EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           ++     + G V+ A +  +++   + +  D  ++  L+  +C S  +  A   L+ M+ 
Sbjct: 568 VVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLN 627

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +G+ P+I T+  L+ G+ K     G +++ +++
Sbjct: 628 KGIFPNIATWDVLVRGFFKKLGHMGPIRILDDI 660



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 137/281 (48%), Gaps = 4/281 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++  ++  +   VK  ++    +++ +MV+CG   NV  +  ++  LCK    ++A  L 
Sbjct: 387 NVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLI 446

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M   G  P VV FN  I   C  G + +A+++  +M        LP++ T+N +++G 
Sbjct: 447 DNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQM---QRYGCLPDTRTYNELLDGL 503

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
             +  ++ A E+   + +  ++ N+ TY T++ G++  G  E  L++   M+  G+ P+ 
Sbjct: 504 FSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDA 563

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMI-DKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           +  N  I+     G V  A+  L  +   K +CPD   ++ L  G+C +  +++A    N
Sbjct: 564 ITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLN 623

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           ++L + +  +  ++++L+    K        ++L  ++ +G
Sbjct: 624 KMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 134/292 (45%), Gaps = 6/292 (2%)

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y+  I  L    +++   ++L  M  + I     ++  +      +G   +A K+  +
Sbjct: 74  LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYR 133

Query: 420 VLEEHMVGDAYSYNILINYLC--KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           + E         YN L++ L     N       +  +M   G+ P++ TY  L+   CK 
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKN 193

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITY- 536
           G ++GA ++   M K    P+ V Y +++  +C+D  ++ A+   + ++R G    ++  
Sbjct: 194 GKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAR---EVARRFGAEGVVSVC 250

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           N LI G    G++ E F +  EM   G+  N V Y+ +I++L   G  + A  ++  MI 
Sbjct: 251 NALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIR 310

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            G  P+  T+++L+  +       E + L   MVL GV P+   YN +++ L
Sbjct: 311 RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGL 362



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 134/294 (45%), Gaps = 10/294 (3%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           + L   GNL  A  V       G ++    C+     +  LV    + G  +GA +V  K
Sbjct: 360 NGLCCSGNLAEAVDVC------GRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNK 413

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G   ++  + + +  L K +   + ++L   M + G    V TFN  I  LC   +
Sbjct: 414 MVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGR 473

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +  A+ +  +M + G  P+   +N +++    V +L+ A +L R+   +    V  N VT
Sbjct: 474 VLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE---LEERKVELNLVT 530

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N ++ GF   G+ E+  ++   M+  G+  +  T   +I  Y++ G    A++  D + 
Sbjct: 531 YNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRIT 590

Query: 352 K-RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
             + L P+ + + S +  +     +E A+  L+ M++K I P+  T+ +L +G 
Sbjct: 591 AGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 97/213 (45%), Gaps = 2/213 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   F+  ++     G    A  V+ +++  G       +N  L  L  +NE+    
Sbjct: 454 CPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEAC 513

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L +E+       N+ T+N V+Y      K E  L +  RML +G+ P+ +  N++I   
Sbjct: 514 ELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAY 573

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            ++G +  A++   +  + +G  + P+ + H  ++ G C    +E A      M+  GI 
Sbjct: 574 SKLGKVRTAIQFLDR--ITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIF 631

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
            N+ T+  L+ G+ +       +R+ D+++ +G
Sbjct: 632 PNIATWDVLVRGFFKKLGHMGPIRILDDILGKG 664


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 253/514 (49%), Gaps = 17/514 (3%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            V D ++    +  A E  + V+Q+LK     +S  A++  +    +     +  + +  
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGL 153

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M       ++  FNL+++ L ++     AL++Y +MLK  + P+VV + ++I+  C+   
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + AL LF +M   +   +LPN + ++ +++G C+  ++  A+ +   M  +G + ++ T
Sbjct: 214 TQDALVLFDEM---TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT 270

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L++G+ + G  ++A  L   + K G +   + Y   I+ LF     E A      M+
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            ++I PD   Y+I+ +GL + G V +A  L  ++ E  +  D   YN LI   C    L 
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A+ L   +      P+  TY  LI G CK G I  A  +++ M+K+   P++V +NS+I
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 507 NGLCKDASLDAAKSL-------------LQASQRIG-LLDAITYNTLINGYFINGKIAEA 552
           NGLCK   L+ A+ L             L+ SQ    + D  +   ++     +G I +A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           + +  ++ + G+  +   YNILIN  CKFG    A +L K M L G +PD VTY TL+  
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDG 570

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             +    E+ +E+ + MV  G  P++ TY  I++
Sbjct: 571 LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 225/487 (46%), Gaps = 52/487 (10%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K +   F  L+ A ++ G  E A +    ++       + A+N  L  LV+         
Sbjct: 125 KISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALA 184

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +Y +M+ C    +V T+ ++I+ LCK CK ++AL L+  M   GI PN + ++++++  C
Sbjct: 185 VYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLC 244

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q   +  A +LF KM     +  L   +T+N ++NGFCK G ++ A  +   + K G   
Sbjct: 245 QAKKIFDAQRLFSKMRASGCNRDL---ITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V  Y  LI+G  R    EEA     +M++  + P+ ++Y   I  L  EG V  AL +L
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M ++ + PD   Y+ L KG C  G + +A  L  ++ +     + ++Y+ILI  +CK+
Sbjct: 362 GEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK------ 496
             +  A+ +   M   G +P ++T+ +LI+G CK   +E A  ++  M+ V K       
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRL 481

Query: 497 ------------------------------------------PNLVIYNSIINGLCKDAS 514
                                                     P++  YN +ING CK  +
Sbjct: 482 SQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541

Query: 515 LDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           ++ A  L +  Q  G + D++TY TLI+G +  G+  +A  +F +M   G       Y  
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 574 LINFLCK 580
           ++ + C+
Sbjct: 602 IMTWSCR 608



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 243/530 (45%), Gaps = 72/530 (13%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++H L    +  DAL+L    M+   + P + +  ++ S  +C+A   +FDA        
Sbjct: 204 LIHGLCKTCKTQDALVLFDE-MTDRGILPNQIIYSIVLS-GLCQAK-KIFDA-------- 252

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                   +  K++  G +  +  +N  L+   K   +   + L + +   G++  V  +
Sbjct: 253 ------QRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGY 306

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +I  L +  + EEA   Y +ML+  I P+V+ + ++I    Q G +  AL L   +G 
Sbjct: 307 GCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTL---LGE 363

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M+   + P+++ +N +I GFC +G ++ AE +R  + K     N  TY+ LI G  + G 
Sbjct: 364 MTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGL 423

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA--------------LFV-LSD 384
             +A  +  EM K G +P+ V +NS I+ L     +E A              LF+ LS 
Sbjct: 424 INKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQ 483

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
             DK    D  +  ++ + LC +G + +A+KL  Q+++  ++ D  +YNILIN  CK  N
Sbjct: 484 GTDKVF--DIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGN 541

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A +L   M ++G +PD +TYGTLIDG  + G  E A++++E M K    P    Y +
Sbjct: 542 INGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKT 601

Query: 505 IINGLCKDASLDAAKSL---------------------------LQASQRIGL------- 530
           I+   C++ ++  A S+                           LQ + R  L       
Sbjct: 602 IMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSK 661

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             D   Y   + G     +  EAFA+FS +++  + ++     +LI  LC
Sbjct: 662 NFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLC 711



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 167/368 (45%), Gaps = 1/368 (0%)

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
              + II    K    E   ++   +  + I  +   ++ LI+ Y+  G  E+A+     
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGL 153

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M      P+   +N  +H+L  +     AL V + M+  ++ PD  TY IL  GLC+   
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            + A  L +++ +  ++ +   Y+I+++ LC++  +  A++L S M   G   D+ITY  
Sbjct: 214 TQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           L++G+CK G ++ A  + + + K      ++ Y  +INGL +    + A    Q   R  
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLREN 333

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  D + Y  +I G    G++ EA  +  EM   G+  + + YN LI   C  G   +A 
Sbjct: 334 IKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAE 393

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   +  H   P+  TY+ L+    KN    +   +  +M   G  P   T+N++I+ L
Sbjct: 394 SLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453

Query: 649 LGEKSAED 656
                 E+
Sbjct: 454 CKANRLEE 461



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 56/367 (15%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           ++AL++    +G  + A  +  +L++  H    + H ++  +  + K   I +   ++KE
Sbjct: 376 YNALIKGFCDMGYLDEAESL--RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKE 433

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM-----------LKSGIWP--NVVC 253
           M   G + +V TFN +I  LCK  +LEEA  L+Y+M           L  G     ++  
Sbjct: 434 MEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
             +++   C+ G +  A KL  ++ V SG  VLP+  T+N +INGFCK G +  A ++  
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQL-VDSG--VLPDIRTYNILINGFCKFGNINGAFKLFK 550

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M   G   +  TY TLIDG  R G +E+AL + ++MVK+G +P +  Y + + W   E 
Sbjct: 551 EMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCREN 610

Query: 374 DVEGALFV-------------------------------LSDMIDKHICPDHF---TYSI 399
           ++  AL V                               +  +++  I   +F    Y+I
Sbjct: 611 NISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTI 670

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
              GL +     +AF + + + +  M   + S  +LI  LC   NL  A  +    + RG
Sbjct: 671 FLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERG 730

Query: 460 --LIPDI 464
             L+P I
Sbjct: 731 FRLMPPI 737


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 225/434 (51%), Gaps = 4/434 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L    +   A+SLY +M  S + P+    N+IIN  C  G +  A     K+ 
Sbjct: 61  FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      PN++T N ++ G C  G+V+ A      ++  G   +  +Y  LI+G  + G
Sbjct: 121 KLGYQ---PNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIG 177

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  A+RL   + +  + PN V+Y+  I  L  +  V+ A  + ++M+ K I PD  TYS
Sbjct: 178 ETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYS 237

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL  G C  G + +A  L N+++ E++  D Y+Y IL++ LCK   +  A+ +L+ M+  
Sbjct: 238 ILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKA 297

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            +  D++ Y TL+DGYC    +  A +V+  M ++   P++  Y+ +INGLCK   +D A
Sbjct: 298 CVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEA 357

Query: 519 KSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +L +   Q+  + D +TY +LI+    +G+I+  + +F EM + G   + + YN LI+ 
Sbjct: 358 LNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDA 417

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK G   +A  L   M    I P+  T+T L+    K    +  +E   D++  G   +
Sbjct: 418 LCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLN 477

Query: 638 NQTYNAIISPLLGE 651
            +TY  +I+ L  E
Sbjct: 478 VRTYTVMINGLCKE 491



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 217/430 (50%), Gaps = 4/430 (0%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +++  GY  N  T N ++  LC E K++EAL  + ++L  G   + + + ++IN  C++G
Sbjct: 118 KILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIG 177

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           +   A++L R++   S   + PN V ++ II+  CK   V+ A ++   M+  GI  +V 
Sbjct: 178 ETRAAIRLLRRIERWS---IRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY+ L+ G+   G    A+ L +EMV   + P+   Y   +  L  EG V+ A  VL+ M
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM 294

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +   +  D   YS L  G C    V  A ++   + +  +  D + Y+I+IN LCK   +
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   +  + ++PD +TY +LID  CK G I     +++ M    + P+++ YN++
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I+ LCK+  LD A +L    +   +   + T+  L++G    G++  A   F ++   G 
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            +N   Y ++IN LCK G   +A  L   M  +G I D VT+  ++  F      ++  +
Sbjct: 475 CLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEK 534

Query: 625 LHDDMVLSGV 634
           L  +M+  G+
Sbjct: 535 LVREMIARGL 544



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 232/470 (49%), Gaps = 6/470 (1%)

Query: 134 GLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
            L    E+ +  P  F  + ++      G    A+  + K+   G+  +    N  +  L
Sbjct: 79  SLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGL 138

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
               ++    + + ++++ G+  +  ++ ++I  +CK  +   A+ L  R+ +  I PNV
Sbjct: 139 CLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNV 198

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           V ++MII+  C+   ++ A  L+ +M    G  + P+ VT++ +++GFC +G++  A ++
Sbjct: 199 VIYSMIIDRLCKDTLVDEAYDLYTEM---VGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M+   I+ ++ TY  L+D   + G  +EA  +   MVK  +  + VVY++ +     
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
             +V  A  V   M    + PD   YSI+  GLC+   V +A  L  ++ +++MV D  +
Sbjct: 316 VNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVT 375

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  LI+ LCKS  ++    L   M+ RG  PD+ITY  LID  CK G+++ A+ ++  MK
Sbjct: 376 YTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK 435

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
               +PN+  +  +++GLCK   L  A    Q     G  L+  TY  +ING    G + 
Sbjct: 436 DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLD 495

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           EA A+ S M + G   + V + I+I          +A +L++ MI  G++
Sbjct: 496 EALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 195/417 (46%), Gaps = 39/417 (9%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           ++A+S +  M      P+   FN I+     V     A+ L+++M +     V P+  T 
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMEL---SEVEPDYFTL 96

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N IIN FC  G+V  A                        G ++             ++K
Sbjct: 97  NIIINCFCHFGQVVLA----------------------FSGVSK-------------ILK 121

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  PN +  N+ +  L  EG V+ AL     ++ +       +Y IL  G+C+ G  + 
Sbjct: 122 LGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRA 181

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L  ++    +  +   Y+++I+ LCK   +  A  L + M+ +G+ PD++TY  L+ 
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVS 241

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G+C  G +  A+ +   M      P++  Y  +++ LCK+  +  A+++L    +  + L
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL 301

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D + Y+TL++GY +  ++  A  +F  M  +G+  +   Y+I+IN LCK     +A  L 
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF 361

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + +    ++PD VTYT+L+    K+     V +L D+M+  G  PD  TYN +I  L
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDAL 418



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 139/293 (47%), Gaps = 3/293 (1%)

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
            +PN   ++ ++  L    D   A+   + M   H  P  F ++ +   L        A 
Sbjct: 21  FLPNLCFHSHSLPPLTHNAD--DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAI 78

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L+ Q+    +  D ++ NI+IN  C    +  A   +S ++  G  P+ IT  TL+ G 
Sbjct: 79  SLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGL 138

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           C  G ++ A++ ++ +     + + + Y  +ING+CK     AA  LL+  +R  +  + 
Sbjct: 139 CLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNV 198

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + Y+ +I+    +  + EA+ +++EM   GI+ + V Y+IL++  C  G   +A +L+  
Sbjct: 199 VIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNE 258

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           M+L  I PD  TYT LV    K    +E   +   MV + V+ D   Y+ ++ 
Sbjct: 259 MVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMD 311



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 4/243 (1%)

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           N +   H     + +N ++  L        A  L   M +  + PD  T   +I+ +C  
Sbjct: 47  NHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHF 106

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G +  A      + K+  +PN +  N+++ GLC +  +  A          G  L  I+Y
Sbjct: 107 GQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISY 166

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             LING    G+   A  +   +    I  N V Y+++I+ LCK     +A +L   M+ 
Sbjct: 167 GILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVG 226

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KS 653
            GI PD VTY+ LV+ F         I+L ++MVL  ++PD  TY  ++  L  E   K 
Sbjct: 227 KGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKE 286

Query: 654 AED 656
           AE+
Sbjct: 287 AEN 289


>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
 gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
 gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
 gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 235/482 (48%), Gaps = 10/482 (2%)

Query: 12  SNSPLSRAFHVGKQFANPSTEDIVFRAIC-VNLRQRKWKILEQMAPSLTNSLVNRVVSEF 70
           +N+P+       ++   P  +D+ F  +   +L Q  W  L +++  L +  V  V+ + 
Sbjct: 37  ANTPIPH-----RRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKI 91

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVS-PL 129
           +K   L+LEF+ W    N  SHSLE+   ++H L   R+F  A  ++ +++    V  P 
Sbjct: 92  QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPA 151

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           +  + LL SY  C +TP VFD+L +    +     A D   ++K  G   ++ + N ++S
Sbjct: 152 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L+    +    + Y+EM  C    N  T N+V+   C+  KL++ + L   M + G   
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
             V +N +I   C+ G L  ALKL   MG  SG  + PN VT N +I+GFC+  +++ A 
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMG-KSG--LQPNVVTFNTLIHGFCRAMKLQEAS 328

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           ++   M    +  N  TY TLI+GY++ G  E A R  ++MV  G+  + + YN+ I  L
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
             +     A   + ++  +++ P+  T+S L  G C      + F+L+  ++      + 
Sbjct: 389 CKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++N+L++  C++ +   A Q+L  M+ R +  D  T   + +G    G  +   ++ + 
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQE 508

Query: 490 MK 491
           M+
Sbjct: 509 ME 510



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 20/358 (5%)

Query: 291 THNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           TH  +++   K  + + AE I R  ++  G+D   + +  L+  Y          R CD 
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY----------RECDS 166

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
             +        V++S             A      M D    P   + +     L   G 
Sbjct: 167 TPR--------VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR 218

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V  A + + ++    +  + Y+ N++++  C+S  L    +LL  M   G     ++Y T
Sbjct: 219 VDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT 278

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G+C+ G +  A+++   M K   +PN+V +N++I+G C+   L  A  +    + + 
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           +  + +TYNTLINGY   G    AF  + +M   GI  + + YN LI  LCK    ++A 
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + +K +    ++P+  T++ L+       + +   EL+  M+ SG  P+ QT+N ++S
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS 456



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 171/408 (41%), Gaps = 51/408 (12%)

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMII------NEACQVGD 266
            ++ T  +V++ L K  K + A S+   +L   G+      F+ ++      +   +V D
Sbjct: 113 HSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFD 172

Query: 267 LEFA----LKLFRKMG----VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
             F     LK FR        M     LP   + N  ++     GRV+ A      M + 
Sbjct: 173 SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRC 232

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            I  N  T   ++ GY R G  ++ + L  +M + G    +V YN+              
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNT-------------- 278

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
                                L  G C  G +  A KL N + +  +  +  ++N LI+ 
Sbjct: 279 ---------------------LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C++  L  A ++   M    + P+ +TY TLI+GY + G+ E A + YE+M     + +
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           ++ YN++I GLCK A    A   ++   +  L+ ++ T++ LI G  +       F ++ 
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            M   G   N+  +N+L++  C+   +  A ++++ M+   I  D  T
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 123/288 (42%), Gaps = 34/288 (11%)

Query: 142 CKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           CK +P  +  + ++    + G  +   +++Q ++  G   +  ++N  ++   +   +  
Sbjct: 232 CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSS 291

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             KL   M   G   NV TFN +I+  C+  KL+EA  ++  M    + PN V +N +IN
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351

Query: 260 EACQVGDLEFALKLFRKM---GV-----------------------------MSGDSVLP 287
              Q GD E A + +  M   G+                             +  ++++P
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVP 411

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           NS T + +I G C     +   E+  +MI++G   N +T+  L+  + R    + A ++ 
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
            EMV+R +  ++   +   + L  +G  +    +L +M  K    + F
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 230/484 (47%), Gaps = 6/484 (1%)

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
           V+ H+ ++ A+++  S   +L         +  M+  G   N  T+N +I A CK   L 
Sbjct: 51  VRSHNAALIAYSSRGSRAPRL---AHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLA 107

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +A +   RM ++G+ P+   +N ++   C+ G L  A  LF +M    G     +  ++ 
Sbjct: 108 DARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACY--DRYSYT 165

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I G C  GR++ A  +   M +      V TY  L+DG  +     EA  L  EMV +
Sbjct: 166 ILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK 225

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G++PN V YN+ I  L  EG  +    +L  M  +   PD +TY+ +  GLC++G V   
Sbjct: 226 GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHG 285

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            K+ ++ + + +  +  +YN LIN  CK  ++ AA  +L  M    + P + T+  +I G
Sbjct: 286 AKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHG 345

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           +C GG +  A+     M      PN V +NS+I+G C       A  LL   +  G+L D
Sbjct: 346 FCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPD 405

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             TY   I+     G++ EA ++FS +   GI  + V Y  L++  C+ G    A  LM+
Sbjct: 406 RQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLME 465

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            M     +PD  TY TL+    K    +  I+L D M   G+ P   T+N +I  +L +K
Sbjct: 466 KMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDK 525

Query: 653 SAED 656
              D
Sbjct: 526 KHAD 529



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 229/481 (47%), Gaps = 6/481 (1%)

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +Q  +  G     +++   +  L     I    +++ +M        V+T+ +++  LCK
Sbjct: 149 VQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCK 208

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             ++ EA +L   M+  G+ PNVV +N +I   CQ G  +   KL  KM +       P+
Sbjct: 209 VRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHS---PD 265

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             T+  +++G CK G+V    ++ +  I  G+   V TY  LI+GY +GG  + AL +  
Sbjct: 266 CWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQ 325

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            M +  + P    +N  IH     G V  A+  L+ M    + P+  T++ L  G C  G
Sbjct: 326 LMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVG 385

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
             K A +L + + E  ++ D  +Y I I+ LC    L  A  L S + ++G+    + Y 
Sbjct: 386 ERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYT 445

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +L+ GYC+ G+I+ A  + E M      P++  YN++I+GLCK   LD A  LL   ++ 
Sbjct: 446 SLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQ 505

Query: 529 GLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+     T+N LI     + K A+A  M+ +M + G   +K  Y + I+     G  ++ 
Sbjct: 506 GIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEE 565

Query: 588 RELMKVMILH--GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              M V+ +H  G+ PD  TY  ++  +      E+    H  M+   + PD  TY+ ++
Sbjct: 566 NIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILL 625

Query: 646 S 646
           +
Sbjct: 626 N 626



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 231/525 (44%), Gaps = 20/525 (3%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L++     G  + A  V  K+        +H +   L  L K+  +G    L  EMV
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G V NV T+N +I  LC+E + ++   L  +M      P+   +  +++  C+ G + 
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
              K+  +     G  V    +T+N +ING+CK G ++ A ++   M +  ++  V+T+ 
Sbjct: 284 HGAKVLHE---AIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFN 340

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I G+  GG   +A+    +M   GL PN V +NS I    + G+ + AL +L  M + 
Sbjct: 341 EVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEY 400

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD  TY+I    LC  G +++A  L + +  + +      Y  L++  C+  ++ +A
Sbjct: 401 GVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSA 460

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L+  M     +PD+ TY TLIDG CK   ++ A+ + + MKK   +P    +N +I  
Sbjct: 461 FGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQ 520

Query: 509 LCKDAS-LDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS--EMRNVGIA 565
           +  D    DAAK   Q        D  TY   I+  +  G   E     +  EM   G+ 
Sbjct: 521 MLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVF 580

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT-------------- 611
            +   YN +I      G  ++A      M+   I PD  TY+ L+               
Sbjct: 581 PDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNE 640

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  K      + EL + M  S  +P   TY A++  L  +   E+
Sbjct: 641 KIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEE 685



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 123/541 (22%), Positives = 209/541 (38%), Gaps = 99/541 (18%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           +  P V  F+ ++      G    A   + ++   G S +   +N+ +S    + E    
Sbjct: 331 RVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIA 390

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +L   M   G + +  T+ + I ALC E +LEEA SL+  +   GI  + V +  +++ 
Sbjct: 391 LRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHG 450

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            CQVGD++ A  L  KM   + ++ +P+  T+N +I+G CK+ R++ A ++   M K GI
Sbjct: 451 YCQVGDIDSAFGLMEKM---ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507

Query: 321 DCNVRTYATLID------------------------------------GYARGGSSEEAL 344
           +    T+  LI                                      +  G + EE +
Sbjct: 508 EPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENI 567

Query: 345 RLCD-EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            +   EM + G+ P+   YN+ I      G  E A F    M+   I PD  TYSIL   
Sbjct: 568 DMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNY 627

Query: 404 LCRNGC--------------VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +C                  V+   +L  Q+ E        +Y  L+  LC    L   +
Sbjct: 628 MCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVE 687

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            LL  M    ++ D      L+  YC       A + + +M     +P L     +++GL
Sbjct: 688 WLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGL 747

Query: 510 CKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           C                                   +G    A ++FS+M  +G   ++V
Sbjct: 748 CD----------------------------------SGDHGMAVSIFSDMLGLGYNYDEV 773

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            + +LI+ L + G      E++ VM     +    TY +LV           V EL++D+
Sbjct: 774 VWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV---------RLVAELNEDL 824

Query: 630 V 630
           V
Sbjct: 825 V 825



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 85/405 (20%), Positives = 168/405 (41%), Gaps = 39/405 (9%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI 169
           F DAL   G L  A+S+     ++G+       KA   ++ +LV    Q+G  + A+ ++
Sbjct: 412 FIDALCDEGQLEEAHSLFSCLPMKGI-------KAHNVIYTSLVHGYCQVGDIDSAFGLM 464

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           +K+  +     +H +N  +  L K+  + R   L  +M   G      TFN++I  +  +
Sbjct: 465 EKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWD 524

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINE-----ACQVGDLEFALKLFRKMGVMSGDS 284
            K  +A  +Y +M+ SG  P+   + + I+      A +  +++ A+    + G      
Sbjct: 525 KKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAG------ 578

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V P+  T+N II  +   G  E A      M+   ID +  TY+ L++            
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN------------ 626

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            +C++        ++  +++   W     DV     +   M +    P   TY  L +GL
Sbjct: 627 YMCNK-------DDSDAFDNEKIWKMV--DVRNLQELFEQMCESDAAPGISTYKALLRGL 677

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C    +++   L  ++    ++ D    + L+   C       A +   SM  +   P +
Sbjct: 678 CNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGL 737

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            +   L+ G C  G+   AV ++ +M  +    + V++  +I+ L
Sbjct: 738 KSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCL 782


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 271/589 (46%), Gaps = 32/589 (5%)

Query: 76  LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL 135
           LAL F+  +  +N F H+  +   ++  L    + D    L+  +           L+G 
Sbjct: 57  LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK----------LQGF 106

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
             S ++       F +++    Q+G  E A ++  ++K  G   S+  +N+ L  L+  N
Sbjct: 107 HCSEDL-------FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 159

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
            I   + +Y++M   G+  NV T+N+++ ALCK  K++ A  L   M   G  PN V + 
Sbjct: 160 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYT 219

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I+  C+VG +        K G    +   P    +N +ING CK    +   E+   M
Sbjct: 220 TVISSMCEVGMV--------KEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEM 271

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ GI  NV +Y+TLI+  +  G  E A  L  +M+KRG  PN    +S +   F  G  
Sbjct: 272 VEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTT 331

Query: 376 EGALFVLSDMIDKH-ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
             AL + + MI    + P+   Y+ L +G C +G + +A  +   + E     +  +Y  
Sbjct: 332 FDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGS 391

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN   K  +L  A  + + M+  G  P+++ Y ++++  C+    + A  + E M K  
Sbjct: 392 LINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKEN 451

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEA 552
             P++  +N+ I GLC    LD A+ + +    Q     + +TYN L++G     +I EA
Sbjct: 452 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEA 511

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           + +  E+   G+  +   YN L++  C  G    A +L+  M+++G  PD +T   ++  
Sbjct: 512 YGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILA 571

Query: 613 FSKNCSPEEVIELHDDMVLSGV---SPDNQTYNAIISPLLGEKSAEDQV 658
           + K    E  +++  D+V  G     PD  +Y  +I  L      ED V
Sbjct: 572 YCKQGKAERAVQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGV 619



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 174/406 (42%), Gaps = 31/406 (7%)

Query: 84  VGENNRFSHSLESSCAIVHLLVNW----RRFDDALLLMGNL----MSANSVSPLEFLEGL 135
           V E  + +   E   ++ + L+N     R +   + LM  +    +S N +S    +  L
Sbjct: 231 VKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINEL 290

Query: 136 LDSYEI--------------CKATPAVFDALVRACTQIGATEGAYDVI-QKLKVKGHSVS 180
            +S +I              C        +LV+ C   G T  A D+  Q ++  G   +
Sbjct: 291 SNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPN 350

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           + A+N  +        I +   ++  M   G   N+ T+  +I    K   LE A+ ++ 
Sbjct: 351 VVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWN 410

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           +ML SG  PNVV +  ++   C+    + A  L     +MS ++  P+  T N  I G C
Sbjct: 411 KMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIE---IMSKENCAPSVPTFNAFIKGLC 467

Query: 301 KLGRVEFAEEIRYAMIKAGIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
             GR+++AE++ +  ++    C  N+ TY  L+DG A+    EEA  L  E+  RG+  +
Sbjct: 468 DAGRLDWAEKV-FRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWS 526

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
              YN+ +H     G    AL ++  M+     PD  T +++    C+ G  ++A ++ +
Sbjct: 527 TSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLD 586

Query: 419 QVL--EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
            V         D  SY  +I  LC+SN       L   MI   +IP
Sbjct: 587 LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 261/557 (46%), Gaps = 22/557 (3%)

Query: 103 LLVNWRRFDDALLLMGNLMSAN-------SVSPLEFLEGLLDSYEICKATPAVFDALVRA 155
           + V  RRF   L    N++S N         +  EF+  L +  +    +P VF   +  
Sbjct: 200 VFVQARRFGLEL----NILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMM 255

Query: 156 CTQIGATEG-------AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
                 + G       A +V++++++ G S ++  +  ++  L +   +    +L +++ 
Sbjct: 256 NYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLR 315

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 N   +N VI+  C+  +L EA  L   M   GI P    ++++I+  C+ G +E
Sbjct: 316 IRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVE 375

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL L  +M      +V P+ VT++ + +G CK G  E +  + + +   G   +V +Y 
Sbjct: 376 KALDLIEEM---VQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYN 432

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI+G+        A +L  EM   G +PN+  +N  IH       ++ AL V + M+  
Sbjct: 433 TLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKV 492

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            +  + FT +I+     R G   +A KL N+V +  +V ++Y+YNI+I +LCK      A
Sbjct: 493 GVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKA 552

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            ++L  M+   + P  I Y TLIDGY K  N   A+ +Y  M KV   P++V Y  +IN 
Sbjct: 553 WEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINM 612

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
               + +  A  L +   + GL+ D I +  +I G+   G +  A+A++ EM   G + N
Sbjct: 613 FSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPN 672

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V Y  LI+   K     +A  L   M    + PD +TYT L+  +      + V E+ +
Sbjct: 673 VVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFN 732

Query: 628 DMVLSGVSPDNQTYNAI 644
           +M  +GV P+   Y  +
Sbjct: 733 EMKENGVFPNYTAYATL 749



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 218/433 (50%), Gaps = 9/433 (2%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I    +   L +A  ++ +  + G+  N++  N ++N   +    EF   LF ++  
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241

Query: 280 MSGDSVLPNSVTHNCIINGFCK--LGR---VEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            SG S  PN  T+  ++N +CK   G+   +  A E+   M   G    V TY   I G 
Sbjct: 242 -SGPS--PNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGL 298

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            R G  E ALRL  ++  R    N+  YN+ IH     G++  A  +L DM    I P  
Sbjct: 299 CRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTA 358

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           ++YSIL  GLC+ G V++A  L  ++++ ++     +Y+ L + LCKS     +  +  +
Sbjct: 359 YSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHN 418

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           +   G   D+I+Y TLI+G+    ++  A ++   M+     PN   +N +I+G CK   
Sbjct: 419 LGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQR 478

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD A  +     ++G+ L+  T N + + +   G   EA  + +E++++GI  N   YNI
Sbjct: 479 LDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNI 538

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +I +LCK    ++A E++ VM+ + + P  + Y TL+  ++K  +P + + L+  M+  G
Sbjct: 539 VIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVG 598

Query: 634 VSPDNQTYNAIIS 646
           + P   TY  +I+
Sbjct: 599 IPPSIVTYTMLIN 611



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 229/508 (45%), Gaps = 53/508 (10%)

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           + + A NN L     +    R + L   ++SC ++ N            +  + E   SL
Sbjct: 185 IKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLN---------CFAEANQTEFIRSL 235

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVG-----DLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +  +  SG  PNV  + +++N  C+       D+  A ++  +M  M+G+S  P  VT+ 
Sbjct: 236 FEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEME-MNGES--PTVVTYG 292

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
             I+G C+ G VEFA  +   +       N   Y  +I  + R G   EA  L ++M   
Sbjct: 293 AYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSH 352

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P    Y+  I  L  +G VE AL ++ +M+  ++ P   TYS L  GLC++G  + +
Sbjct: 353 GISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEIS 412

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             + + +  E    D  SYN LIN      ++ +A +L+  M + G +P+  T+  LI G
Sbjct: 413 LSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHG 472

Query: 474 YCKGGNIEGAVQVYENMKKVEKK-----------------------------------PN 498
           +CK   ++ A++V+  M KV  +                                   PN
Sbjct: 473 FCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPN 532

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFS 557
              YN +I  LCK+   + A  +L    +  +   AI YNTLI+GY       +A  +++
Sbjct: 533 SYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYA 592

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           +M  VGI  + V Y +LIN        Q+A  L K MI  G++PD + +T ++  F K  
Sbjct: 593 KMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVG 652

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAII 645
             +    L+++M   G SP+  TY  +I
Sbjct: 653 DMKSAWALYEEMSQWGKSPNVVTYTCLI 680



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 180/373 (48%), Gaps = 8/373 (2%)

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           +  N +I  F +   +  A ++     + G++ N+ +   L++ +A    +E    L +E
Sbjct: 179 IVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEE 238

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEG------DVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           +   G  PN   Y   +++ + +G      D+  A  VL +M      P   TY     G
Sbjct: 239 LKDSGPSPNVFTYTIMMNY-YCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHG 297

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           LCR GCV+ A +L   +   +   ++Y YN +I+  C++  L  A +LL  M   G+ P 
Sbjct: 298 LCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPT 357

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
             +Y  LIDG CK G +E A+ + E M +   KP+LV Y+S+ +GLCK    + + S+  
Sbjct: 358 AYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFH 417

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G   D I+YNTLING+ +   +  A  +  EMR  G   N   +N LI+  CK  
Sbjct: 418 NLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQ 477

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A E+  +M+  G+  +  T   +   F++     E ++L +++   G+ P++ TYN
Sbjct: 478 RLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYN 537

Query: 643 AIISPLLGEKSAE 655
            +I  L  E+  E
Sbjct: 538 IVIKWLCKEQKTE 550


>gi|8777358|dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]
          Length = 1012

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 158/619 (25%), Positives = 279/619 (45%), Gaps = 109/619 (17%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L F E  +DS  +       +  LV A  Q+G  +   D++++L+ +G       ++N++
Sbjct: 232 LGFFESAVDS-GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 290

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               K   +       +EMV  G   +V +++++I  L KE  +EEAL L  +M+K G+ 
Sbjct: 291 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 350

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRK-------------------------------- 276
           PN++ +  II   C++G LE A  LF +                                
Sbjct: 351 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 410

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +G M    + P+ +T+N +ING C  GRV  A+E+       G+  +V TY+TL+D Y +
Sbjct: 411 LGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIK 465

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
             + +  L +    ++  +  + V+ N  +      G    A  +   M +  + PD  T
Sbjct: 466 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 525

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ + KG C+ G +++A ++ N+ L +  V  A  YN +I+ LCK   L  A ++L  + 
Sbjct: 526 YATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELW 584

Query: 457 VRGLIPDIITYGTLIDG-----------------------------------YCKGGNIE 481
            +GL  DI T  TL+                                      CK G+ E
Sbjct: 585 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 644

Query: 482 GAVQVY---------------------ENMKKVE-------------KKPNLVIYNSIIN 507
            A++VY                     +N++ ++                +++ Y  IIN
Sbjct: 645 AAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 704

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK+  L  A +L   ++  G+ L+ ITYN+LING    G + EA  +F  + N+G+  
Sbjct: 705 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 764

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           ++V Y ILI+ LCK G +  A +L+  M+  G++P+ + Y ++V  + K    E+ + + 
Sbjct: 765 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 824

Query: 627 DDMVLSGVSPDNQTYNAII 645
              ++  V+PD  T +++I
Sbjct: 825 SRKMMGRVTPDAFTVSSMI 843



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 219/442 (49%), Gaps = 38/442 (8%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGI---WPNVVCFNMIINEACQVGDLEFALKLF 274
           TF  +IY   ++ +++ A+ +   M    +   + N VC + +I+  C++G  E AL  F
Sbjct: 177 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC-SAVISGFCKIGKPELALGFF 235

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
               V SG  ++PN VT+  +++  C+LG+V+   ++   +   G + +   Y+  I GY
Sbjct: 236 ES-AVDSG-VLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 293

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            +GG+  +AL    EMV++G+  + V Y+  I  L  EG+VE AL +L  MI + + P+ 
Sbjct: 294 FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 353

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ + +GLC+ G +++AF L N++L   +  D + Y  LI+ +C+  NL  A  +L  
Sbjct: 354 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 413

Query: 455 MIVRGLIPDIITYGTLIDGYCKGG------------------------------NIEGAV 484
           M  RG+ P I+TY T+I+G C  G                              NI+  +
Sbjct: 414 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVL 473

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
           ++     + +   +LV+ N ++       +   A +L +A   + L  D  TY T+I GY
Sbjct: 474 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 533

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G+I EA  MF+E+R   ++   V YN +I+ LCK G    A E++  +   G+  D 
Sbjct: 534 CKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 592

Query: 604 VTYTTLVTRFSKNCSPEEVIEL 625
            T  TL+     N   + ++ L
Sbjct: 593 HTSRTLLHSIHANGGDKGILGL 614



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 214/461 (46%), Gaps = 47/461 (10%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG    +  ++  L   +K+  I    ++ +  +      ++   N+++ A        E
Sbjct: 447 KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 506

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A +LY  M +  + P+   +  +I   C+ G +E AL++F ++      S +  +V +N 
Sbjct: 507 ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR----KSSVSAAVCYNR 562

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI-----DGYARG------------ 337
           II+  CK G ++ A E+   + + G+  ++ T  TL+     +G  +G            
Sbjct: 563 IIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLN 622

Query: 338 ------------------GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG--DVEG 377
                             GS E A+ +   M ++GL    V + STI     +    ++ 
Sbjct: 623 SDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRSLDA 679

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
            L V++         D   Y+I+  GLC+ G + +A  L +      +  +  +YN LIN
Sbjct: 680 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 739

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+   L  A +L  S+   GL+P  +TYG LID  CK G    A ++ ++M      P
Sbjct: 740 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 799

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAM 555
           N++IYNSI++G CK    + A  ++ + + +G +  DA T +++I GY   G + EA ++
Sbjct: 800 NIIIYNSIVDGYCKLGQTEDAMRVV-SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSV 858

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           F+E ++  I+ +  G+  LI   C  G  ++AR L++ M++
Sbjct: 859 FTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 899



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 130/553 (23%), Positives = 237/553 (42%), Gaps = 67/553 (12%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+   ++ G  E A  ++ K+  +G   ++  +   +  L K+ ++   + L+  ++
Sbjct: 321 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 380

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ----- 263
           S G   +   +  +I  +C++  L  A S+   M + GI P+++ +N +IN  C      
Sbjct: 381 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 440

Query: 264 ---------VGD-LEFALKLFRKMGVMSGDSVLP------------NSVTHNCIINGFCK 301
                    VGD + ++  L   + V + D+VL             + V  N ++  F  
Sbjct: 441 EADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 500

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G    A+ +  AM +  +  +  TYAT+I GY + G  EEAL + +E+ ++  +   V 
Sbjct: 501 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVC 559

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  I  L  +G ++ A  VL ++ +K +  D  T   L   +  NG  K    L   + 
Sbjct: 560 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGL- 618

Query: 422 EEHMVGDA--YSYNILINYLCKSNNLAAAKQLLSSMIVRGL---IP-------------- 462
            E +  D      N  I  LCK  +  AA ++   M  +GL    P              
Sbjct: 619 -EQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSL 677

Query: 463 -----------------DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
                            D+I Y  +I+G CK G +  A+ +    K      N + YNS+
Sbjct: 678 DAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSL 737

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           INGLC+   L  A  L  + + IGL+ + +TY  LI+     G   +A  +   M + G+
Sbjct: 738 INGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 797

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N + YN +++  CK G  + A  ++   ++  + PD  T ++++  + K    EE + 
Sbjct: 798 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALS 857

Query: 625 LHDDMVLSGVSPD 637
           +  +     +S D
Sbjct: 858 VFTEFKDKNISAD 870



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/552 (21%), Positives = 236/552 (42%), Gaps = 73/552 (13%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + A++R   ++G  E A+ +  ++   G  V    +   +  + +   + R + +  +M
Sbjct: 355 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 414

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEA------------------------------LS 237
              G   ++ T+N VI  LC   ++ EA                              L 
Sbjct: 415 EQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLE 474

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           +  R L++ I  ++V  N+++     +G    A  L+R M  M    + P++ T+  +I 
Sbjct: 475 IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD---LTPDTATYATMIK 531

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G+CK G++E A E+   + K+ +   V  Y  +ID   + G  + A  +  E+ ++GL  
Sbjct: 532 GYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYL 590

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLS--DMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +     + +H + A G  +G L ++   + ++  +C      +IL   LC+ G  + A +
Sbjct: 591 DIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL--LCKRGSFEAAIE 648

Query: 416 LH-----------------NQVLEEHMVGDAY-----------------SYNILINYLCK 441
           ++                   +++     DAY                  Y I+IN LCK
Sbjct: 649 VYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCK 708

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A  L S    RG+  + ITY +LI+G C+ G +  A++++++++ +   P+ V 
Sbjct: 709 EGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVT 768

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +I+ LCK+     A+ LL +    GL+ + I YN++++GY   G+  +A  + S   
Sbjct: 769 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 828

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
              +  +    + +I   CK G  ++A  +        I  D+  +  L+  F      E
Sbjct: 829 MGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRME 888

Query: 621 EVIELHDDMVLS 632
           E   L  +M++S
Sbjct: 889 EARGLLREMLVS 900



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 79/453 (17%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  L   + +   G    LY+ M       +  T+  +I   CK  ++EEAL ++  + K
Sbjct: 492 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 551

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFA----LKLFRK------------------------ 276
           S +    VC+N II+  C+ G L+ A    ++L+ K                        
Sbjct: 552 SSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 610

Query: 277 -MGVMSGDSVLPNSV---THNCIINGFCKLGRVEFAEEIRYAMIKAGIDC---------- 322
            +G++ G   L + V     N  I   CK G  E A E+   M + G+            
Sbjct: 611 ILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTL 670

Query: 323 --NVRT----------------------YATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
             N+R+                      Y  +I+G  + G   +AL LC     RG+  N
Sbjct: 671 VDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLN 730

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            + YNS I+ L  +G +  AL +   + +  + P   TY IL   LC+ G    A KL +
Sbjct: 731 TITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLD 790

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            ++ + +V +   YN +++  CK      A +++S  ++  + PD  T  ++I GYCK G
Sbjct: 791 SMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKG 850

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-------ASQRIGLL 531
           ++E A+ V+   K      +   +  +I G C    ++ A+ LL+         + I  +
Sbjct: 851 DMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRV 910

Query: 532 DA-ITYNTLINGYFI----NGKIAEAFAMFSEM 559
           DA +  +  I G+ +     G++ +A  +  E+
Sbjct: 911 DAELAESESIRGFLVELCEQGRVPQAIKILDEI 943



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 179/425 (42%), Gaps = 45/425 (10%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           +LKSG  P +   +  +    ++      L+ + ++       +  N   ++ +   F  
Sbjct: 58  LLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQL---DSKQININHRIYSIVSWAFLN 114

Query: 302 LGRVEFAEE-IRYAMIKAGIDCNVRTYATLIDGYA--RGGSSEEALRLCDEMVKRGLMPN 358
           L R E AE+ I   + KA I        +LI G++  R   S+  L L D +   G  P+
Sbjct: 115 LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPS 174

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI-CP-DHFTYSILTKGLCRNGCVKQAFKL 416
           ++ + S I+    +G+++ A+ VL  M +K++  P D+F  S +  G C+ G  + A   
Sbjct: 175 SLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGF 234

Query: 417 HNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
               ++   +V +  +Y  L++ LC+   +   + L+  +   G   D + Y   I GY 
Sbjct: 235 FESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF 294

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT 535
           KGG +  A+   ++ + VEK  N                                 D ++
Sbjct: 295 KGGALVDALM--QDREMVEKGMNR--------------------------------DVVS 320

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y+ LI+G    G + EA  +  +M   G+  N + Y  +I  LCK G  ++A  L   ++
Sbjct: 321 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 380

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL--LGEKS 653
             GI  D   Y TL+    +  +      +  DM   G+ P   TYN +I+ L   G  S
Sbjct: 381 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 440

Query: 654 AEDQV 658
             D+V
Sbjct: 441 EADEV 445


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/596 (25%), Positives = 289/596 (48%), Gaps = 37/596 (6%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNW----RRFDDALLLMGN 119
           N +++ F +  K+    Y +   N+    +L  S A    +++     RR D AL ++  
Sbjct: 334 NTLINGFFREGKINHARYVF---NHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSE 390

Query: 120 LMSANSVSPLEFL-EGLLDSYEICKAT---PAVFDALVRACTQIGATEGAYDVIQKLKVK 175
            M    V P E     LL+ Y  CK +   PA++                  +++ LK +
Sbjct: 391 -MQITGVMPSELTYSALLNGY--CKVSMLGPAIY------------------LMEDLKSR 429

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +++       +    ++ EI +  ++ K M   G   +V T++ +I  +C+  K+ E 
Sbjct: 430 GITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHET 489

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             +  RM KSGI PN V +  +I   C+ G ++ ALK F  +       ++ N V HN +
Sbjct: 490 KEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDI---YRRGLVANPVIHNAL 546

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++ F + G +  AE  R  M +  I  +  ++  +ID Y   G+   A  + D+MV+ G 
Sbjct: 547 LHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGY 606

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN   Y + +  L   G +  A   +S ++D     D  T++ L  G+CR G + +A  
Sbjct: 607 SPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALD 666

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L  ++++ + + D ++Y IL++  C+   +  A  +L  M+ +G++PD + Y  L++G  
Sbjct: 667 LCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLI 726

Query: 476 KGGNIEGAVQVY-ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDA 533
             G ++ A  V+ E + K     + + YNS++NG  K  +++  K ++    Q     ++
Sbjct: 727 NEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNS 786

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            +YN L++GY   G+ +++  ++  M   GI  + V Y +LI  L + G    A + ++ 
Sbjct: 787 ASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEK 846

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           M+L GI PD + +  L+T FS+       +++ + M    +SP ++T++A+I+ L+
Sbjct: 847 MVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLI 902



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 284/624 (45%), Gaps = 87/624 (13%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
            I+H  V   RF  AL ++ + M  +SV                +A    ++ ++    +
Sbjct: 265 TILHWYVKKGRFKAALCVLED-MERDSV----------------QADVYTYNIMIDKLCR 307

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           I  +  A+ ++++++    +     +N  ++   +  +I     ++  M+    V +V T
Sbjct: 308 IKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVAT 367

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL----- 273
           +  +I   C+  ++++ALS+   M  +G+ P+ + ++ ++N  C+V  L  A+ L     
Sbjct: 368 YTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLK 427

Query: 274 -----------------FRKMGVMSG----------DSVLPNSVTHNCIINGFCKLGRVE 306
                            F ++G +S           D + P+ +T++ +ING C++ ++ 
Sbjct: 428 SRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMH 487

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
             +EI   M K+GI  N   Y TLI  Y + G  +EAL+   ++ +RGL+ N V++N+ +
Sbjct: 488 ETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALL 547

Query: 367 HWLFAEG-----------------------------------DVEGALFVLSDMIDKHIC 391
           H  + EG                                   ++ GA  V  DM+     
Sbjct: 548 HAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYS 607

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY  L +GLC+ G + QA +  + +L+     D  ++N L+  +C+   L  A  L
Sbjct: 608 PNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDL 667

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              MI    +PDI TY  L+ G+C+ G I  A+ + + M +    P+ V Y  ++NGL  
Sbjct: 668 CEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLIN 727

Query: 512 DASLDAAKSLL-QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +  + AA  +  +   + GL  D I YN+L+NGY  +  +     M S+M    +  N  
Sbjct: 728 EGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSA 787

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YNIL++   K G + ++  L K M+  GI PD VTY  L+   S+    +  ++  + M
Sbjct: 788 SYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 847

Query: 630 VLSGVSPDNQTYNAIISPLLGEKS 653
           VL G+ PD   ++ +I+    EKS
Sbjct: 848 VLEGIFPDRLVFDILITA-FSEKS 870



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 263/588 (44%), Gaps = 39/588 (6%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD-------SY 139
           +N  +H ++SS   +  +  W   +      G+L  ++    L+ L  +++       +Y
Sbjct: 46  DNTPAHGIDSSIITIQTMTRWETLNHMAYKFGSLGKSDGKLALKILSSIVERSGLDRITY 105

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
             C A P +  A + +         A  V++ L V G S +   + + L  + + +    
Sbjct: 106 VYCMAVPILIQAQMHS--------QAMSVLKHLAVTGFSCTA-IFTSLLRTISRFDPTNH 156

Query: 200 --FWKLYKEMV----------------SCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
             F  L K  V                 CG+  +  + N ++ AL +E + +        
Sbjct: 157 VVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRE 216

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
            L       V   N+++N  C  G+   A  + +KM        + NSVT+N I++ + K
Sbjct: 217 SLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMK----SCHISNSVTYNTILHWYVK 272

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR + A  +   M +  +  +V TY  +ID   R   S  A  L   M K  L P+   
Sbjct: 273 KGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECT 332

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ I+  F EG +  A +V + M+ +++ P   TY+ +  G CRN  + +A  + +++ 
Sbjct: 333 YNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQ 392

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              ++    +Y+ L+N  CK + L  A  L+  +  RG+  +      LIDG+C+ G I 
Sbjct: 393 ITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEIS 452

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A Q+ ++M +    P+++ Y+++ING+C+ A +   K +L   Q+ G+L + + Y TLI
Sbjct: 453 KAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLI 512

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
             Y   G + EA   F ++   G+  N V +N L++   + G   +A    + M    I 
Sbjct: 513 CYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNIS 572

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            D V++  ++  +    +      ++DDMV  G SP+  TY  ++  L
Sbjct: 573 FDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGL 620



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 245/495 (49%), Gaps = 5/495 (1%)

Query: 149  FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            F+ ++ +    G   GA+ V   +   G+S ++  + N L  L +   + +  +    ++
Sbjct: 578  FNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLL 637

Query: 209  SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
               +  +  TFN ++  +C+   L+EAL L  +M+K+   P++  + ++++  C+ G + 
Sbjct: 638  DIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKIL 697

Query: 269  FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTY 327
             AL + +   +M    V+P++V + C++NG    G+V+ A  + + +I K G+  +   Y
Sbjct: 698  PALVILQ---MMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAY 754

Query: 328  ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +L++GY +  +     R+  +M +  + PN+  YN  +H     G    +L++   M+ 
Sbjct: 755  NSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR 814

Query: 388  KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            K I PD+ TY +L  GL   G +  A K   +++ E +  D   ++ILI    + + +  
Sbjct: 815  KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHN 874

Query: 448  AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            A Q+ + M    + P   T+  +I+G  + G ++ + +V   M +V  +PN   Y +++N
Sbjct: 875  ALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVN 934

Query: 508  GLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
              C+   +D A  L +  + IG++ A +  +++I G    GK+ EA  +FS M   G+  
Sbjct: 935  AKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVP 994

Query: 567  NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
                +  L++ LCK      A  L ++M L  +  D V+Y  L+T   K+    + ++L+
Sbjct: 995  TVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLY 1054

Query: 627  DDMVLSGVSPDNQTY 641
             +M   G+ P+  TY
Sbjct: 1055 GEMKSKGLWPNITTY 1069



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 249/518 (48%), Gaps = 7/518 (1%)

Query: 144  ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL-SHLVKLNEIGRFWK 202
            A P + +AL+ A  + G    A    Q +     S    ++N  + S+  + N +G F  
Sbjct: 538  ANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAF-S 596

Query: 203  LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            +Y +MV  GY  NV T+  ++  LC+   L +A      +L      +   FN ++   C
Sbjct: 597  VYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGIC 656

Query: 263  QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            + G L+ AL L  KM     ++ LP+  T+  +++GFC+ G++  A  I   M++ G+  
Sbjct: 657  RYGTLDEALDLCEKM---IKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVP 713

Query: 323  NVRTYATLIDGYARGGSSEEALRLCDEMV-KRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +   Y  L++G    G  + A  +  E++ K GL  + + YNS ++      +V     +
Sbjct: 714  DTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRM 773

Query: 382  LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            +SDM    + P+  +Y+IL  G  + G   ++  L+  ++ + +  D  +Y +LI  L +
Sbjct: 774  MSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 833

Query: 442  SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
               +  A + L  M++ G+ PD + +  LI  + +   +  A+QV+  MK +   P+   
Sbjct: 834  CGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKT 893

Query: 502  YNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMR 560
            ++++INGL +   LD +  +L    ++GL    T Y  L+N     G+I  AF +  EM+
Sbjct: 894  FSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMK 953

Query: 561  NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             +GI   +V  + +I  LC+ G  ++A  +   M+  G++P   T+TTL+    K     
Sbjct: 954  AIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIA 1013

Query: 621  EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            + + L   M L  +  D  +YN +I+ L  +K   D +
Sbjct: 1014 DALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDAL 1051



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/548 (22%), Positives = 248/548 (45%), Gaps = 35/548 (6%)

Query: 133 EGLLDSYEICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           E +L   + C  + +V ++ ++    + G  + A  V++ ++       ++ +N  +  L
Sbjct: 246 EDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKL 305

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            ++    R + L K M       +  T+N +I    +E K+  A  ++  ML+  + P+V
Sbjct: 306 CRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSV 365

Query: 252 VCFNMIINEACQVGDLEFALKLFRKM---GVMSGD------------------------- 283
             +  +I+  C+   ++ AL +  +M   GVM  +                         
Sbjct: 366 ATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMED 425

Query: 284 ----SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                +  N      +I+GFC++G +  A++I  +M + GID +V TY+ LI+G  R   
Sbjct: 426 LKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAK 485

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             E   +   M K G++PN+V+Y + I +    G V+ AL    D+  + +  +   ++ 
Sbjct: 486 MHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNA 545

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L     R G + +A      +   ++  D+ S+N +I+  C   N+  A  +   M+  G
Sbjct: 546 LLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYG 605

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P++ TY  L+ G C+GG++  A Q    +  +    +   +N+++ G+C+  +LD A 
Sbjct: 606 YSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEAL 665

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L +   +   L D  TY  L++G+   GKI  A  +   M   G+  + V Y  L+N L
Sbjct: 666 DLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGL 725

Query: 579 CKFGCYQQARELM-KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
              G  + A  +  +++   G+  D + Y +L+  + K+ +   +  +  DM  + V P+
Sbjct: 726 INEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPN 785

Query: 638 NQTYNAII 645
           + +YN ++
Sbjct: 786 SASYNILM 793



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 256/544 (47%), Gaps = 24/544 (4%)

Query: 115  LLMGNLMSANSVSPLEFLEGLLD-SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
            LL G     + V   +F+  LLD  + I + T   F+AL+    + G  + A D+ +K+ 
Sbjct: 616  LLRGLCQGGHLVQARQFMSCLLDIPFAIDEKT---FNALLLGICRYGTLDEALDLCEKMI 672

Query: 174  VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
                   IH +   LS   +  +I     + + M+  G V +   +  ++  L  E +++
Sbjct: 673  KNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVK 732

Query: 234  EALSLYYRML-KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
             A  +++ ++ K G++ + + +N ++N   +  ++     + R M  M  + V PNS ++
Sbjct: 733  AASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVN---TIKRMMSDMYQNEVYPNSASY 789

Query: 293  NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
            N +++G+ K G+   +  +   M++ GI  +  TY  LI G +  G  + A++  ++MV 
Sbjct: 790  NILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVL 849

Query: 353  RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
             G+ P+ +V++  I     +  +  AL V + M   H+ P   T+S +  GL R G +  
Sbjct: 850  EGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDH 909

Query: 413  AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
            + K+ +++L+  +  +   Y  L+N  C+   +  A +L   M   G++P  +   ++I 
Sbjct: 910  SHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIR 969

Query: 473  GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
            G C+ G +E AV V+ +M +    P +  + ++++ LCK++ +  A  L +  +   L +
Sbjct: 970  GLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRV 1029

Query: 532  DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
            D ++YN LI G   +  I++A  ++ EM++ G+  N   Y  L   +   G  Q   EL+
Sbjct: 1030 DVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELL 1089

Query: 592  KVMILHGIIPDYVTYTTLVTRFS---------KNCSPE------EVIELHDDMVLSGVSP 636
            + +   G+IP Y     L  R           +NC  E      E++ L    V S  S 
Sbjct: 1090 EDIEERGLIPAYKQPENLERRMEDAIIRLNMIRNCRKEVPFRGVELLPLDPKPVCSAASD 1149

Query: 637  DNQT 640
             N T
Sbjct: 1150 CNPT 1153


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 164/591 (27%), Positives = 277/591 (46%), Gaps = 24/591 (4%)

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
            KSPK AL  +        ++HS       + LL+  RR  D  L+         V    
Sbjct: 20  EKSPKSALALFDSASRQPGYTHSPH-----IFLLI-LRRLSDPKLV---------VHVTR 64

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK-VKGHSVSIHAWNNFLS 189
            +E  L   + CK T  V   +++A  +      A D  QK++ + G    I ++N  L+
Sbjct: 65  IVE--LIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLN 122

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
             ++ N + +         + G + N+ T+N++I    K+ +  EA  L   M    + P
Sbjct: 123 AFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKP 182

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +V  +  +IN   + GDL  AL++F +M       ++P+ + +N +I+GF K G     +
Sbjct: 183 DVYSYGTVINGMVKSGDLVSALEVFDEM---FERGLVPDVMCYNIMIDGFFKRGDYVQGK 239

Query: 310 EIRYAMIKAG-IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           EI   ++K   +  NV TY  +I+G  + G  +E+L + + M K     +   Y+S I  
Sbjct: 240 EIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICG 299

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L   G+V+GA+ V  +M+ + +  D  TY+ L  G CR G +K++F+L   + +E+   +
Sbjct: 300 LCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKEN-CHN 358

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SYNI I  L ++  +  A  +   +  RG   D  TYG LI G CK G++  A+++ +
Sbjct: 359 VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILK 418

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
             K    K +   Y+SI++GL K   +D A  ++    + G  L     N LING+    
Sbjct: 419 EAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRAS 478

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           K+ EA   F EM   G +   V YN LIN LCK   +  A   +K M+     PD +TY+
Sbjct: 479 KLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYS 538

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            L+    +    +  + L   +++ G+ PD   +N ++  L      ED +
Sbjct: 539 LLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDAL 589



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 253/534 (47%), Gaps = 47/534 (8%)

Query: 119 NLMSANSVSPLEFLE--GLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKV 174
           N++   SV   +F+E  GLLD        P V+    ++    + G    A +V  ++  
Sbjct: 153 NILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFE 212

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV--SCGYVENVNTFNLVIYALCKECKL 232
           +G    +  +N  +    K  +  +  ++++ +V  SC Y  NV T+N++I  LCK  + 
Sbjct: 213 RGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVY-PNVVTYNVMINGLCKMGRF 271

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +E+L ++ RM K+    ++  ++ +I   C VG+++ A++++++M      SV+ + VT+
Sbjct: 272 DESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM---VKRSVVVDVVTY 328

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++NGFC+ G+++ + E+   M K     NV +Y   I G       EEA+ + + + +
Sbjct: 329 NALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRR 387

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG   ++  Y   IH L   G +  AL +L +  D     D F YS +  GL + G V +
Sbjct: 388 RGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDE 447

Query: 413 AFKLHNQV------------------------LEEHMV-----------GDAYSYNILIN 437
           A  + +Q+                        LEE +                SYN LIN
Sbjct: 448 ALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLIN 507

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LCK+   + A   +  M+ +   PD+ITY  L+DG C+G  I+ A+ ++  +     +P
Sbjct: 508 GLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEP 567

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
           ++ ++N +++GLC    ++ A  L     Q   L + +T+NTL++G +   +   A  ++
Sbjct: 568 DVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIW 627

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           + M   G   + + YNI +  LC  G       L    + +GI+P  +T+  LV
Sbjct: 628 ACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILV 681



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 216/439 (49%), Gaps = 11/439 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++    ++G  + + ++ +++K     + +  +++ +  L  +  +    ++YKEM
Sbjct: 257 TYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V    V +V T+N ++   C+  K++E+  L+  M K     NVV +N+ I    +   +
Sbjct: 317 VKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKV 375

Query: 268 EFAL---KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           E A+   +L R+ G  SG     +S T+  +I+G CK G +  A +I       G   + 
Sbjct: 376 EEAISVWELLRRRG--SG----ADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDA 429

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             Y++++DG ++ G  +EAL +  +M K G   +  V N  I+       +E A+    +
Sbjct: 430 FAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFRE 489

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M  K   P   +Y+ L  GLC+      A+    ++LE+    D  +Y++L++ LC+   
Sbjct: 490 METKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKK 549

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A  L   ++V+GL PD+  +  L+ G C  G IE A+ +Y NMK+    PNLV +N+
Sbjct: 550 IDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNT 609

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +++GL K    + A  +     + G   D I+YN  + G    G+I++  A+F +    G
Sbjct: 610 LMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNG 669

Query: 564 IAVNKVGYNILINFLCKFG 582
           I    + + IL+  + K G
Sbjct: 670 ILPTSITWYILVRAVLKLG 688



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 203/409 (49%), Gaps = 5/409 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     + +L+     +G  +GA +V +++  +   V +  +N  L+   +  +I   +
Sbjct: 286 CEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESF 345

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+  M+      NV ++N+ I  L +  K+EEA+S++  + + G   +   + ++I+  
Sbjct: 346 ELWV-MMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGL 404

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L  ALK+ ++     GD +  ++  ++ I++G  K GRV+ A  I + M K G +
Sbjct: 405 CKNGHLNKALKILKE-AKDGGDKL--DAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCE 461

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +      LI+G+ R    EEA+    EM  +G  P  V YN+ I+ L        A   
Sbjct: 462 LSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSF 521

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           + +M++K   PD  TYS+L  GLC+   +  A  L  QVL + +  D   +NIL++ LC 
Sbjct: 522 VKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCS 581

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +  A  L S+M     +P+++T+ TL+DG  K    E A  ++  M K   +P+++ 
Sbjct: 582 AGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIIS 641

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKI 549
           YN  + GLC    +    +L   + + G+L  +IT+  L+      G +
Sbjct: 642 YNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPL 690


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 247/528 (46%), Gaps = 26/528 (4%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     F+ L+ A  ++G  E A +V  K+  KG   +  +    +    +         
Sbjct: 150 KPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGID 209

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L  EM S G + N   +N VI +LC E +  EA  L  +M + G+ P++V FN  I   C
Sbjct: 210 LLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALC 269

Query: 263 QVGDLEFALKLFRKMGVMSGDSVL-PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           + G +  A ++FR M +     +  PN+VT+N ++ GFC  G  E A  I +  +K    
Sbjct: 270 KSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI-FDSMKNSET 328

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++R+Y   + G  R G   EA  + +EM ++ + PN   YN  +H L   G    A  +
Sbjct: 329 LSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSI 388

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M +  + PD  TYS L  G CR G + +A  +  ++++     + Y+ NIL++ L K
Sbjct: 389 LGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWK 448

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM----------- 490
               + A+ LL  M  RG   D +T  T+I+G CK GN++ A+++   M           
Sbjct: 449 EGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNL 508

Query: 491 ----------KKVEKK--PNLVIYNSIINGLCKDASLD-AAKSLLQASQRIGLLDAITYN 537
                     +   KK  P+ + Y +II GLCK   +D A K LL+   +    D++ ++
Sbjct: 509 GNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFD 568

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T I  Y   GK++ AF +  EM   G   +   YN LI  L       +   LM  M   
Sbjct: 569 TFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKER 628

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           GI P+  TY  +++  S+    ++   L D+M+  G+SP+  T+  +I
Sbjct: 629 GIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 252/562 (44%), Gaps = 35/562 (6%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK--GH 177
           L++A     ++ L  LL S     A P+ F +LVR    +G  E A    + L+ +    
Sbjct: 56  LITAKMHPQIDHLHQLLLSQHRDFAHPSGF-SLVRTLADLGLLENAISQFRSLRDRFPHD 114

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
              I  +N      +K + +     LYK+M          TFNL+I ALC+   LE A  
Sbjct: 115 PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENARE 174

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           ++ +M + G  PN     +++   C+ G     + L  +   M     LPN V +N +I+
Sbjct: 175 VFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE---MRSSGALPNRVAYNTVIS 231

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV---KRG 354
             C  G+   AE++   M + G+  ++ T+   I    + G   EA R+  +M    + G
Sbjct: 232 SLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMG 291

Query: 355 L-MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           L  PN V YN  +    +EG  E A  +   M +        +Y+I   GL R+G + +A
Sbjct: 292 LPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLR-SYNIWMLGLVRSGKLLEA 350

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             + N++ E+++  + YSYNIL++ LCK    + A+ +L  M   G+ PD +TY TL+ G
Sbjct: 351 HLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHG 410

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           YC+ G I  A  V   M +V   PN+   N +++ L K+     A+ LLQ     G  LD
Sbjct: 411 YCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLD 470

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV-----------------------NKV 569
            +T NT+ING    G + +A  + S M   G A                        + +
Sbjct: 471 NVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSI 530

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  +I  LCK G   +A++ +  MI   + PD + + T +  + K         +  +M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 630 VLSGVSPDNQTYNAIISPLLGE 651
              G +   +TYN++I  L  E
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSE 612



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 4/315 (1%)

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L  +M    + P    +N  I  L   G +E A  V   M +K   P+ F+  IL +G C
Sbjct: 140 LYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           R G       L +++     + +  +YN +I+ LC       A++L+  M   GL PDI+
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEK----KPNLVIYNSIINGLCKDASLDAAKSL 521
           T+   I   CK G I  A +++ +M+  E+    KPN V YN ++ G C +   + A+++
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
             + +    L   +YN  + G   +GK+ EA  + +EM    I  N   YNIL++ LCK+
Sbjct: 320 FDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKY 379

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G +  AR ++ +M   G+ PD VTY+TL+  + +     E   +  +M+  G  P+  T 
Sbjct: 380 GMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTC 439

Query: 642 NAIISPLLGEKSAED 656
           N ++  L  E  A +
Sbjct: 440 NILLHSLWKEGRASE 454



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/511 (21%), Positives = 219/511 (42%), Gaps = 27/511 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     ++ ++      G  E A  +   +K    ++S+ ++N ++  LV+  ++     
Sbjct: 294 KPNTVTYNLMLEGFCSEGMFEEARAIFDSMK-NSETLSLRSYNIWMLGLVRSGKLLEAHL 352

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +  EM       N+ ++N++++ LCK     +A S+   M +SG+ P+ V ++ +++  C
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +  A  + R+M +  G    PN  T N +++   K GR   AE++   M + G   
Sbjct: 413 RRGKILEANYVLREM-IQVG--CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGL 469

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRG-----------------------LMPNN 359
           +  T  T+I+G  + G+ ++A+ +   M  RG                        +P++
Sbjct: 470 DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDS 529

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y + I  L   G V+ A   L +MI K + PD   +       C+ G +  AF++  +
Sbjct: 530 ITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKE 589

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + ++       +YN LI  L   N +     L+  M  RG+ P++ TY  +I    +GG 
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
           ++ A  + + M +    PN+  +  +I    K     AA+ L + +  +       Y+ +
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFM 709

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
            N     G+  +A  +F    +  +A+    Y  LI  LCK G    A  ++  M+    
Sbjct: 710 FNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQY 769

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
             D  ++  ++    K  S     E  + M+
Sbjct: 770 SFDPASFMPVIDELGKRGSKHAADEFAERMM 800



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 140/324 (43%), Gaps = 20/324 (6%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEI------CKATPAVFDALVRACTQIGATE 163
            D A+ ++  + +  S S        +D ++I      C      +  ++    ++G  +
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A   + ++  K  S     ++ F+ +  K  ++   +++ KEM   G  +++ T+N +I
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
             L  E ++ E   L   M + GI+PNV  +N II+   + G L+ A  L  +M +  G 
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEM-LQKG- 664

Query: 284 SVLPNSVTHNCIINGF---CKLGRVEFAEEIRYAMIKAGIDCNVRT--YATLIDGYARGG 338
            + PN  T   +I  F   C  G  +   EI  ++      C  +   Y+ + +    GG
Sbjct: 665 -ISPNIYTFRILIGAFFKACDFGAAQELFEIALSL------CGHKESLYSFMFNELLAGG 717

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            + +A  L +  + R L   N +Y   I  L  +G ++ A F+L  M+DK    D  ++ 
Sbjct: 718 ETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFM 777

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLE 422
            +   L + G    A +   +++E
Sbjct: 778 PVIDELGKRGSKHAADEFAERMME 801


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 248/491 (50%), Gaps = 5/491 (1%)

Query: 146 PAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           PA+ F  ++ +  +    + A  + Q+++  G        N  ++   +L  I   + ++
Sbjct: 57  PAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVF 116

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            +++  GY  +  TF ++I  LC + ++ +AL  + +++  G   + V +  +IN  C+V
Sbjct: 117 AKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRV 176

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+ + A++L R++    G  V PN V ++ II+  CK   V  A ++   M+   I  +V
Sbjct: 177 GETKAAVQLLRRV---DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDV 233

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY++LI G+   G  + A+ L + M+   + PN   ++  I     EG V  A  VL+ 
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+ K++  D  TY+ L  G C    V +A  L N + +  +  D +SY+I+IN  CK   
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A +L   M  + + P+++TY +L+DG CK G    A+++ + M    +  N++ YNS
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           I++ +CK+  +D A  LL   +  G+  D  TY  LING    G++ +A  +F ++   G
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
            + N   Y  LIN  C  G + +   ++  M  +G IP+ +TY  L+    +    ++  
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAE 533

Query: 624 ELHDDMVLSGV 634
           +L  +M+  G+
Sbjct: 534 KLLREMIARGL 544



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 247/475 (52%), Gaps = 5/475 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +   L  L+K  +      L ++M   G   +  T NL++    +   ++ + S++ ++L
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKIL 120

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P+ V F ++I   C  G++  AL    K+ V  G  +  + V++  +ING C++G
Sbjct: 121 KKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKV-VAQGFQL--DQVSYGTLINGLCRVG 177

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             + A ++   +    +  NV  Y+T+ID   +     +A  L  EMV + + P+ V Y+
Sbjct: 178 ETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYS 237

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I      G ++ A+ + + MI  +I P+ +T+SIL  G C+ G V++A  +   ++++
Sbjct: 238 SLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKK 297

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++  D  +YN L++  C    +  AK L + M  RG+ PD+ +Y  +I+G+CK   ++ A
Sbjct: 298 NVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEA 357

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLING 542
           ++++E M   +  PN+V YNS+++GLCK      A  L+ +   R    + ITYN++++ 
Sbjct: 358 MKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDA 417

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              N  + +A  + ++++  GI  +   Y +LIN LCK G    A+++ + +++ G  P+
Sbjct: 418 ICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPN 477

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
             TYT+L+  F      +E + +   M  +G  P+  TY  +I  L  EK   D+
Sbjct: 478 IYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLF-EKDENDK 531



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 237/450 (52%), Gaps = 4/450 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+   +Q+G  + ++ V  K+  KG+      +   +  L    E+ +    + ++V+ G
Sbjct: 99  LMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG 158

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +  +  ++  +I  LC+  + + A+ L  R+    + PNVV ++ II+  C+   +  A 
Sbjct: 159 FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAF 218

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            L+ +M       + P+ VT++ +I+GFC +G++++A ++   MI   I+ NV T++ LI
Sbjct: 219 DLYCEM---VSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           DG+ + G   EA  +   M+K+ +  + V YNS +        V  A  + + M  + + 
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVT 335

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD ++YSI+  G C+   V +A KL  ++  + +  +  +YN L++ LCKS   + A +L
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALEL 395

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M  RG   +IITY +++D  CK  +++ A+ +   +K+   +P++  Y  +INGLCK
Sbjct: 396 VDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455

Query: 512 DASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              LD A+ + +     G    I TY +LING+   G   E  AM S+M++ G   N + 
Sbjct: 456 VGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAIT 515

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGII 600
           Y ILI+ L +     +A +L++ MI  G++
Sbjct: 516 YEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 204/383 (53%), Gaps = 3/383 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    ++G T+ A  +++++  K    ++  ++  +  + K   +   + LY EMV
Sbjct: 166 YGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMV 225

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S     +V T++ +I   C   KL+ A+ L+ RM+   I PNV  F+++I+  C+ G + 
Sbjct: 226 SKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVR 285

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +   + VM   +V  + VT+N +++G+C + +V  A+ +   M + G+  +V +Y+
Sbjct: 286 EAKNV---LAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYS 342

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I+G+ +    +EA++L +EM  + + PN V YNS +  L   G    AL ++ +M D+
Sbjct: 343 IMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDR 402

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               +  TY+ +   +C+N  V +A  L  ++ E+ +  D ++Y +LIN LCK   L  A
Sbjct: 403 GQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDA 462

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           +++   ++V+G  P+I TY +LI+G+C  G  +  + +   MK     PN + Y  +I+ 
Sbjct: 463 QKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHS 522

Query: 509 LCKDASLDAAKSLLQASQRIGLL 531
           L +    D A+ LL+     GLL
Sbjct: 523 LFEKDENDKAEKLLREMIARGLL 545



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 186/364 (51%), Gaps = 1/364 (0%)

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +P ++    I+    K  + + A  +   M   GI  +  T   L++ +++ G  + +  
Sbjct: 55  IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           +  +++K+G  P+ V +   I  L  +G+V  AL+    ++ +    D  +Y  L  GLC
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           R G  K A +L  +V  + +  +   Y+ +I+ +CK   +  A  L   M+ + + PD++
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY +LI G+C  G ++ AV ++  M      PN+  ++ +I+G CK+  +  AK++L   
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
            +  + LD +TYN+L++GY +  ++ +A ++F+ M   G+  +   Y+I+IN  CK    
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +A +L + M    I P+ VTY +LV    K+      +EL D+M   G   +  TYN+I
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSI 414

Query: 645 ISPL 648
           +  +
Sbjct: 415 LDAI 418


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 249/532 (46%), Gaps = 28/532 (5%)

Query: 141 ICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           + K  P    F+ L+ A  ++G  E A +V  K+  KG   +  +    +    +     
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L  EM S G + N   +N VI +LC E +  EA  L  +M + G+ P++V FN  I
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRI 265

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVL-PNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
              C+ G +  A ++FR M +     +  PN+VT+N ++ GFC  G  E A  I +  +K
Sbjct: 266 AALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI-FDSMK 324

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
                ++R+Y   + G  R G   EA  + +EM ++ + PN   YN  +H L   G    
Sbjct: 325 NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSD 384

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +L  M +  + PD  TYS L  G CR G + +A  +  ++++     + Y+ NIL++
Sbjct: 385 ARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLH 444

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM------- 490
            L K    + A+ LL  M  RG   D +T  T+I+G CK GN++ A+++   M       
Sbjct: 445 SLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSAS 504

Query: 491 --------------KKVEKK--PNLVIYNSIINGLCKDASLD-AAKSLLQASQRIGLLDA 533
                         +   KK  P+ + Y +II GLCK   +D A K LL+   +    D+
Sbjct: 505 LGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDS 564

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           + ++T I  Y   GK++ AF +  EM   G   +   YN LI  L       +   LM  
Sbjct: 565 LIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDE 624

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           M   GI P+  TY  +++  S+    ++   L D+M+  G+SP+  T+  +I
Sbjct: 625 MKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI 676



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 252/562 (44%), Gaps = 35/562 (6%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK--GH 177
           L++A     ++ L  LL S     A P+ F +LVR    +G  E A    + L+ +    
Sbjct: 56  LITAKMHPQIDHLHQLLLSQHRDFAHPSGF-SLVRTLADLGLLENAISQFRSLRDRFPHD 114

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
              I  +N      +K + +     LYK+M          TFNL+I ALC+   LE A  
Sbjct: 115 PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENARE 174

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           ++ +M + G  PN     +++   C+ G     + L  +   M     LPN V +N +I+
Sbjct: 175 VFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE---MRSSGALPNRVAYNTVIS 231

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV---KRG 354
             C  G+   AE++   M + G+  ++ T+   I    + G   EA R+  +M    + G
Sbjct: 232 SLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMG 291

Query: 355 L-MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           L  PN V YN  +    +EG  E A  +   M +        +Y+I   GL R+G + +A
Sbjct: 292 LPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLR-SYNIWMLGLVRSGKLLEA 350

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             + N++ E+++  + YSYNIL++ LCK    + A+ +L  M   G+ PD +TY TL+ G
Sbjct: 351 HLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHG 410

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
           YC+ G I  A  V   M +V   PN+   N +++ L K+     A+ LLQ     G  LD
Sbjct: 411 YCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLD 470

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV-----------------------NKV 569
            +T NT+ING    G + +A  + S M   G A                        + +
Sbjct: 471 NVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSI 530

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y  +I  LCK G   +A++ +  MI   + PD + + T +  + K         +  +M
Sbjct: 531 TYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEM 590

Query: 630 VLSGVSPDNQTYNAIISPLLGE 651
              G +   +TYN++I  L  E
Sbjct: 591 EKKGCNKSLRTYNSLIQGLGSE 612



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 153/315 (48%), Gaps = 4/315 (1%)

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L  +M    + P    +N  I  L   G +E A  V   M +K   P+ F+  IL +G C
Sbjct: 140 LYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYC 199

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           R G       L +++     + +  +YN +I+ LC       A++L+  M   GL PDI+
Sbjct: 200 RAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIV 259

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEK----KPNLVIYNSIINGLCKDASLDAAKSL 521
           T+   I   CK G I  A +++ +M+  E+    KPN V YN ++ G C +   + A+++
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
             + +    L   +YN  + G   +GK+ EA  + +EM    I  N   YNIL++ LCK+
Sbjct: 320 FDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKY 379

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G +  AR ++ +M   G+ PD VTY+TL+  + +     E   +  +M+  G  P+  T 
Sbjct: 380 GMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTC 439

Query: 642 NAIISPLLGEKSAED 656
           N ++  L  E  A +
Sbjct: 440 NILLHSLWKEGRASE 454



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/511 (21%), Positives = 219/511 (42%), Gaps = 27/511 (5%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     ++ ++      G  E A  +   +K    ++S+ ++N ++  LV+  ++     
Sbjct: 294 KPNTVTYNLMLEGFCSEGMFEEARAIFDSMK-NSETLSLRSYNIWMLGLVRSGKLLEAHL 352

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +  EM       N+ ++N++++ LCK     +A S+   M +SG+ P+ V ++ +++  C
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYC 412

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +  A  + R+M +  G    PN  T N +++   K GR   AE++   M + G   
Sbjct: 413 RRGKILEANYVLREM-IQVG--CFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGL 469

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRG-----------------------LMPNN 359
           +  T  T+I+G  + G+ ++A+ +   M  RG                        +P++
Sbjct: 470 DNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDS 529

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + Y + I  L   G V+ A   L +MI K + PD   +       C+ G +  AF++  +
Sbjct: 530 ITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKE 589

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + ++       +YN LI  L   N +     L+  M  RG+ P++ TY  +I    +GG 
Sbjct: 590 MEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGK 649

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
           ++ A  + + M +    PN+  +  +I    K     AA+ L + +  +       Y+ +
Sbjct: 650 LKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFM 709

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
            N     G+  +A  +F    +  +A+    Y  LI  LCK G    A  ++  M+    
Sbjct: 710 FNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQY 769

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
             D  ++  ++    K  S     E  + M+
Sbjct: 770 SFDPASFMPVIDELGKRGSKHAADEFAERMM 800



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 140/324 (43%), Gaps = 20/324 (6%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEI------CKATPAVFDALVRACTQIGATE 163
            D A+ ++  + +  S S        +D ++I      C      +  ++    ++G  +
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVD 546

Query: 164 GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVI 223
            A   + ++  K  S     ++ F+ +  K  ++   +++ KEM   G  +++ T+N +I
Sbjct: 547 EAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLI 606

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
             L  E ++ E   L   M + GI+PNV  +N II+   + G L+ A  L  +M +  G 
Sbjct: 607 QGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEM-LQKG- 664

Query: 284 SVLPNSVTHNCIINGF---CKLGRVEFAEEIRYAMIKAGIDCNVRT--YATLIDGYARGG 338
            + PN  T   +I  F   C  G  +   EI  ++      C  +   Y+ + +    GG
Sbjct: 665 -ISPNIYTFRILIGAFFKACDFGAAQELFEIALSL------CGHKESLYSFMFNELLAGG 717

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            + +A  L +  + R L   N +Y   I  L  +G ++ A F+L  M+DK    D  ++ 
Sbjct: 718 ETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFM 777

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLE 422
            +   L + G    A +   +++E
Sbjct: 778 PVIDELGKRGSKHAADEFAERMME 801


>gi|145334827|ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g57250, mitochondrial; Flags: Precursor
 gi|332009488|gb|AED96871.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 971

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 158/619 (25%), Positives = 279/619 (45%), Gaps = 109/619 (17%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L F E  +DS  +       +  LV A  Q+G  +   D++++L+ +G       ++N++
Sbjct: 191 LGFFESAVDS-GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               K   +       +EMV  G   +V +++++I  L KE  +EEAL L  +M+K G+ 
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRK-------------------------------- 276
           PN++ +  II   C++G LE A  LF +                                
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +G M    + P+ +T+N +ING C  GRV  A+E+       G+  +V TY+TL+D Y +
Sbjct: 370 LGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIK 424

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
             + +  L +    ++  +  + V+ N  +      G    A  +   M +  + PD  T
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ + KG C+ G +++A ++ N+ L +  V  A  YN +I+ LCK   L  A ++L  + 
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELW 543

Query: 457 VRGLIPDIITYGTLIDG-----------------------------------YCKGGNIE 481
            +GL  DI T  TL+                                      CK G+ E
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 603

Query: 482 GAVQVY---------------------ENMKKVE-------------KKPNLVIYNSIIN 507
            A++VY                     +N++ ++                +++ Y  IIN
Sbjct: 604 AAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 663

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK+  L  A +L   ++  G+ L+ ITYN+LING    G + EA  +F  + N+G+  
Sbjct: 664 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           ++V Y ILI+ LCK G +  A +L+  M+  G++P+ + Y ++V  + K    E+ + + 
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783

Query: 627 DDMVLSGVSPDNQTYNAII 645
              ++  V+PD  T +++I
Sbjct: 784 SRKMMGRVTPDAFTVSSMI 802



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 219/442 (49%), Gaps = 38/442 (8%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGI---WPNVVCFNMIINEACQVGDLEFALKLF 274
           TF  +IY   ++ +++ A+ +   M    +   + N VC + +I+  C++G  E AL  F
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC-SAVISGFCKIGKPELALGFF 194

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
               V SG  ++PN VT+  +++  C+LG+V+   ++   +   G + +   Y+  I GY
Sbjct: 195 ES-AVDSG-VLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 252

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            +GG+  +AL    EMV++G+  + V Y+  I  L  EG+VE AL +L  MI + + P+ 
Sbjct: 253 FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ + +GLC+ G +++AF L N++L   +  D + Y  LI+ +C+  NL  A  +L  
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372

Query: 455 MIVRGLIPDIITYGTLIDGYCKGG------------------------------NIEGAV 484
           M  RG+ P I+TY T+I+G C  G                              NI+  +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVL 432

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
           ++     + +   +LV+ N ++       +   A +L +A   + L  D  TY T+I GY
Sbjct: 433 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G+I EA  MF+E+R   ++   V YN +I+ LCK G    A E++  +   G+  D 
Sbjct: 493 CKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551

Query: 604 VTYTTLVTRFSKNCSPEEVIEL 625
            T  TL+     N   + ++ L
Sbjct: 552 HTSRTLLHSIHANGGDKGILGL 573



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 214/461 (46%), Gaps = 47/461 (10%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG    +  ++  L   +K+  I    ++ +  +      ++   N+++ A        E
Sbjct: 406 KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 465

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A +LY  M +  + P+   +  +I   C+ G +E AL++F ++      S +  +V +N 
Sbjct: 466 ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR----KSSVSAAVCYNR 521

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI-----DGYARG------------ 337
           II+  CK G ++ A E+   + + G+  ++ T  TL+     +G  +G            
Sbjct: 522 IIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLN 581

Query: 338 ------------------GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG--DVEG 377
                             GS E A+ +   M ++GL    V + STI     +    ++ 
Sbjct: 582 SDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRSLDA 638

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
            L V++         D   Y+I+  GLC+ G + +A  L +      +  +  +YN LIN
Sbjct: 639 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+   L  A +L  S+   GL+P  +TYG LID  CK G    A ++ ++M      P
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 758

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAM 555
           N++IYNSI++G CK    + A  ++ + + +G +  DA T +++I GY   G + EA ++
Sbjct: 759 NIIIYNSIVDGYCKLGQTEDAMRVV-SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSV 817

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           F+E ++  I+ +  G+  LI   C  G  ++AR L++ M++
Sbjct: 818 FTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 130/553 (23%), Positives = 237/553 (42%), Gaps = 67/553 (12%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+   ++ G  E A  ++ K+  +G   ++  +   +  L K+ ++   + L+  ++
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ----- 263
           S G   +   +  +I  +C++  L  A S+   M + GI P+++ +N +IN  C      
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399

Query: 264 ---------VGD-LEFALKLFRKMGVMSGDSVLP------------NSVTHNCIINGFCK 301
                    VGD + ++  L   + V + D+VL             + V  N ++  F  
Sbjct: 400 EADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 459

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G    A+ +  AM +  +  +  TYAT+I GY + G  EEAL + +E+ ++  +   V 
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVC 518

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  I  L  +G ++ A  VL ++ +K +  D  T   L   +  NG  K    L   + 
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGL- 577

Query: 422 EEHMVGDA--YSYNILINYLCKSNNLAAAKQLLSSMIVRGL---IP-------------- 462
            E +  D      N  I  LCK  +  AA ++   M  +GL    P              
Sbjct: 578 -EQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSL 636

Query: 463 -----------------DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
                            D+I Y  +I+G CK G +  A+ +    K      N + YNS+
Sbjct: 637 DAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSL 696

Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           INGLC+   L  A  L  + + IGL+ + +TY  LI+     G   +A  +   M + G+
Sbjct: 697 INGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N + YN +++  CK G  + A  ++   ++  + PD  T ++++  + K    EE + 
Sbjct: 757 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALS 816

Query: 625 LHDDMVLSGVSPD 637
           +  +     +S D
Sbjct: 817 VFTEFKDKNISAD 829



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/552 (21%), Positives = 236/552 (42%), Gaps = 73/552 (13%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + A++R   ++G  E A+ +  ++   G  V    +   +  + +   + R + +  +M
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDM 373

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEA------------------------------LS 237
              G   ++ T+N VI  LC   ++ EA                              L 
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLE 433

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           +  R L++ I  ++V  N+++     +G    A  L+R M  M    + P++ T+  +I 
Sbjct: 434 IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD---LTPDTATYATMIK 490

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G+CK G++E A E+   + K+ +   V  Y  +ID   + G  + A  +  E+ ++GL  
Sbjct: 491 GYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYL 549

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLS--DMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +     + +H + A G  +G L ++   + ++  +C      +IL   LC+ G  + A +
Sbjct: 550 DIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL--LCKRGSFEAAIE 607

Query: 416 LH-----------------NQVLEEHMVGDAY-----------------SYNILINYLCK 441
           ++                   +++     DAY                  Y I+IN LCK
Sbjct: 608 VYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCK 667

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A  L S    RG+  + ITY +LI+G C+ G +  A++++++++ +   P+ V 
Sbjct: 668 EGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVT 727

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y  +I+ LCK+     A+ LL +    GL+ + I YN++++GY   G+  +A  + S   
Sbjct: 728 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 787

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
              +  +    + +I   CK G  ++A  +        I  D+  +  L+  F      E
Sbjct: 788 MGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRME 847

Query: 621 EVIELHDDMVLS 632
           E   L  +M++S
Sbjct: 848 EARGLLREMLVS 859



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/453 (23%), Positives = 188/453 (41%), Gaps = 79/453 (17%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  L   + +   G    LY+ M       +  T+  +I   CK  ++EEAL ++  + K
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFA----LKLFRK------------------------ 276
           S +    VC+N II+  C+ G L+ A    ++L+ K                        
Sbjct: 511 SSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 569

Query: 277 -MGVMSGDSVLPNSV---THNCIINGFCKLGRVEFAEEIRYAMIKAGIDC---------- 322
            +G++ G   L + V     N  I   CK G  E A E+   M + G+            
Sbjct: 570 ILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTL 629

Query: 323 --NVRT----------------------YATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
             N+R+                      Y  +I+G  + G   +AL LC     RG+  N
Sbjct: 630 VDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLN 689

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            + YNS I+ L  +G +  AL +   + +  + P   TY IL   LC+ G    A KL +
Sbjct: 690 TITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLD 749

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            ++ + +V +   YN +++  CK      A +++S  ++  + PD  T  ++I GYCK G
Sbjct: 750 SMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKG 809

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-------ASQRIGLL 531
           ++E A+ V+   K      +   +  +I G C    ++ A+ LL+         + I  +
Sbjct: 810 DMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRV 869

Query: 532 DA-ITYNTLINGYFI----NGKIAEAFAMFSEM 559
           DA +  +  I G+ +     G++ +A  +  E+
Sbjct: 870 DAELAESESIRGFLVELCEQGRVPQAIKILDEI 902



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 179/425 (42%), Gaps = 45/425 (10%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           +LKSG  P +   +  +    ++      L+ + ++       +  N   ++ +   F  
Sbjct: 17  LLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQL---DSKQININHRIYSIVSWAFLN 73

Query: 302 LGRVEFAEE-IRYAMIKAGIDCNVRTYATLIDGYA--RGGSSEEALRLCDEMVKRGLMPN 358
           L R E AE+ I   + KA I        +LI G++  R   S+  L L D +   G  P+
Sbjct: 74  LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPS 133

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI-CP-DHFTYSILTKGLCRNGCVKQAFKL 416
           ++ + S I+    +G+++ A+ VL  M +K++  P D+F  S +  G C+ G  + A   
Sbjct: 134 SLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGF 193

Query: 417 HNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
               ++   +V +  +Y  L++ LC+   +   + L+  +   G   D + Y   I GY 
Sbjct: 194 FESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF 253

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT 535
           KGG +  A+   ++ + VEK  N                                 D ++
Sbjct: 254 KGGALVDALM--QDREMVEKGMNR--------------------------------DVVS 279

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y+ LI+G    G + EA  +  +M   G+  N + Y  +I  LCK G  ++A  L   ++
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL--LGEKS 653
             GI  D   Y TL+    +  +      +  DM   G+ P   TYN +I+ L   G  S
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399

Query: 654 AEDQV 658
             D+V
Sbjct: 400 EADEV 404


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 263/569 (46%), Gaps = 75/569 (13%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +V A  Q+G  + A +V++K+  +G   ++  +N  ++  V   +     ++ + M   G
Sbjct: 232 VVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVGDLEFA 270
              NV T  +++   CK+ K++EA  L   + +  +   +   + ++++  CQ+G +E A
Sbjct: 292 VSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDA 351

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           +++  +M +  G  V  N V  N +I G+CKLG+V  AE +   M+   +  +  +Y TL
Sbjct: 352 VRIRDEM-LRVGLKV--NMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTL 408

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           +DGY R G   +A  LC+EM+  G+ P  V YN+ I  L   G  + AL +   M+++ +
Sbjct: 409 LDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGV 468

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  +   +     + G   +A  L  ++L         ++N +I+ LCK   L  A  
Sbjct: 469 TPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGA 528

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   M   GL PD ITY TL DGYCK GN++ A Q+   M++     ++ +YNS+I+GL 
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLF 588

Query: 511 KDASLDAAKSLLQASQRIGL-LDAITYNT------------------------------- 538
           K   L+    LL   Q  GL  + +TY T                               
Sbjct: 589 KIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVV 648

Query: 539 ----LINGYFINGKIAEAFAMFSEMRNVGIAV---------------------------- 566
               +++  + + +I+EA  +  +M +  I                              
Sbjct: 649 VCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKS 708

Query: 567 -------NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
                  N + YNI I+ LCK G   +AR ++ V++  G +PD  TY TL+   S + + 
Sbjct: 709 DICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNV 768

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +E  +L D+M+  G+ P+   YNA+I+ L
Sbjct: 769 DEAFKLRDEMLEKGLIPNITIYNALINGL 797



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 152/633 (24%), Positives = 299/633 (47%), Gaps = 43/633 (6%)

Query: 26  FANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVG 85
             +P   D + R + +N  Q    +  + +  LT+SL+ R+    R  P   L F+    
Sbjct: 37  LPHPELLDRITRLLILNRPQSLHNLTFKYSDHLTDSLLRRL----RLHPSACLSFFHLAT 92

Query: 86  ENNRF-SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA 144
           +N+ +  HSL  S  ++H+L + R F +A  ++  LM  +  +          +Y +C  
Sbjct: 93  QNSHYRPHSLSYS-ILLHILTHARLFPEATTVLRQLMDLHCTNNYR-------AYAVCNH 144

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
             +V+        + G   G +D++ K   +   ++ HA                   ++
Sbjct: 145 VFSVY-------KEFGFCSGVFDMLMKAFAE-RGMTKHAL-----------------YVF 179

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            EM   G V  + + + ++  L ++ +   A+ ++ +++ +GI P+V   ++++N  CQV
Sbjct: 180 DEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQV 239

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G ++ A+++  KM     + + PN VT+N ++NG+   G  E  E +   M + G+  NV
Sbjct: 240 GRVDVAMEVLEKM---VKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNV 296

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMP-NNVVYNSTIHWLFAEGDVEGALFVLS 383
            T   L+ GY + G  +EA +L  E+ +  L+  +  VY   +      G +E A+ +  
Sbjct: 297 VTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRD 356

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M+   +  +    + L KG C+ G V +A ++   +++ ++  D YSYN L++  C+  
Sbjct: 357 EMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREG 416

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            ++ A  L   M+  G+ P ++TY T+I G    G+ + A+ ++  M +    PN +   
Sbjct: 417 KVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCC 476

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++++   K    D A  L +     G   + + +NT+I+G    GK+ EA A+F  M+ +
Sbjct: 477 TMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKEL 536

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G++ +++ Y  L +  CK G  Q+A ++  VM    +      Y +L+    K     +V
Sbjct: 537 GLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDV 596

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            +L  +M   G+SP+  TY  +IS    E+  +
Sbjct: 597 TDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 218/433 (50%), Gaps = 22/433 (5%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP V  ++ +++    +G+ + A  +   +  +G + +  +    L    K+ +  R   
Sbjct: 434 TPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMM 493

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+KE++  G+ ++   FN +I  LCK  KL EA +++ RM + G+ P+ + +  + +  C
Sbjct: 494 LWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYC 553

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G+++ A   F+  GVM   ++  +   +N +I+G  K+ ++    ++   M   G+  
Sbjct: 554 KNGNVQEA---FQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NV TY TLI G+      ++A  L  EM++RG  PN VV +  +  L+ +  +  A  +L
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM--------VGDAYSYNI 434
             M+D  I   H          C +  VK    L  Q + + +        + +   YNI
Sbjct: 671 DKMLDFDILAVH--------NKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNI 722

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
            I+ LCKS  L  A+ +LS ++ RG +PD  TY TLI      GN++ A ++ + M +  
Sbjct: 723 AIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKG 782

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             PN+ IYN++INGLCK  ++D A+ L     + GL+ +A+TYN LI  Y   G + +A 
Sbjct: 783 LIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKAS 842

Query: 554 AMFSEMRNVGIAV 566
            +  +M   GI+ 
Sbjct: 843 RLREKMTEEGIST 855



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 230/480 (47%), Gaps = 14/480 (2%)

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           + +H  NN+ ++ V        + +YKE   C  V     F++++ A  +    + AL +
Sbjct: 128 MDLHCTNNYRAYAV----CNHVFSVYKEFGFCSGV-----FDMLMKAFAERGMTKHALYV 178

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           +  M + G  P +   + ++ +  Q G+   A+ +F ++    G  ++P+    + ++N 
Sbjct: 179 FDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI---VGTGIVPDVYMCSIVVNA 235

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            C++GRV+ A E+   M+K G++ NV TY  L++GY   G  E   R+   M +RG+  N
Sbjct: 236 HCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRN 295

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMI-DKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
            V     +     +G ++ A  +L ++  D+ +  D   Y +L  G C+ G ++ A ++ 
Sbjct: 296 VVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIR 355

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++L   +  +    N LI   CK   +  A+++   M+   L PD  +Y TL+DGYC+ 
Sbjct: 356 DEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCRE 415

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
           G +  A  + E M      P +V YN++I GL    S D A  L       G+  + I+ 
Sbjct: 416 GKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISC 475

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            T+++ +F  G    A  ++ E+   G   + V +N +I+ LCK G   +A  +   M  
Sbjct: 476 CTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKE 535

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            G+ PD +TY TL   + KN + +E  ++   M    +S   + YN++I  L   +   D
Sbjct: 536 LGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLND 595



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 228/458 (49%), Gaps = 10/458 (2%)

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
           +++N  L    +  ++ + + L +EM+  G    V T+N VI  L      ++AL L++ 
Sbjct: 403 YSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHL 462

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ G+ PN +    +++   ++GD + A+ L++++    G     ++V  N +I+G CK
Sbjct: 463 MVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI---LGRGFTKSTVAFNTMISGLCK 519

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G++  A  +   M + G+  +  TY TL DGY + G+ +EA ++   M ++ +  +  +
Sbjct: 520 MGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEM 579

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YNS I  LF    +     +L +M  + + P+  TY  L  G C    + +AF L+ +++
Sbjct: 580 YNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMI 639

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           E     +    + +++ L + + ++ A  +L  M+   ++     +    D   K     
Sbjct: 640 ERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA---VHNKCSDKLVKNDLTL 696

Query: 482 GAVQVYENMKKVE---KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
            A ++ +++ K +      N ++YN  I+GLCK   LD A+S+L      G L D  TY 
Sbjct: 697 EAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYC 756

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           TLI+   ++G + EAF +  EM   G+  N   YN LIN LCK G   +A+ L   +   
Sbjct: 757 TLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQK 816

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           G++P+ VTY  L+  + +    ++   L + M   G+S
Sbjct: 817 GLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 166/351 (47%), Gaps = 14/351 (3%)

Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKV 174
           MG LM A +V          D  +    +P    +  L     + G  + A+ +   ++ 
Sbjct: 520 MGKLMEAGAV---------FDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +  S SI  +N+ +  L K+ ++     L  EM + G   NV T+  +I   C E KL++
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  LY+ M++ G  PNVV  + I++   +   +  A  +  KM  +  D +  ++   + 
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM--LDFDILAVHNKCSDK 688

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++     L   + A+ +  + I   +  N+  Y   IDG  + G  +EA  +   ++ RG
Sbjct: 689 LVKNDLTLEAQKIADSLDKSDICNSLSNNI-VYNIAIDGLCKSGKLDEARSVLSVLMSRG 747

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
            +P+N  Y + IH     G+V+ A  +  +M++K + P+   Y+ L  GLC+ G + +A 
Sbjct: 748 FLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQ 807

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           +L  ++ ++ +V +A +YNILI   C+  +L  A +L   M   G+   II
Sbjct: 808 RLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 253/521 (48%), Gaps = 8/521 (1%)

Query: 63  VNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS 122
           ++RV+   +     AL F+ WV  +     S  + C I+H+L   + F+ A+  +  L+ 
Sbjct: 99  ISRVLLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELIL 158

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
               +  +  + L    + C   P +FD L++A  + G  +  +    ++   G+  S+ 
Sbjct: 159 LVKDTDEDVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVI 218

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A N  L+ L+K N I   W +Y EM   G + N  TFN++ +  CK+  +++      +M
Sbjct: 219 ACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKM 278

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            + G  P++V +N +IN  C  G L  A  L+R   +M    VLP+ V++  ++NG CK 
Sbjct: 279 EEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYR---IMYRRCVLPDLVSYTALMNGLCKE 335

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GRV  A ++ + M+  G++ +V +Y TLI GY + G   E+  L  EM+  G+ P++   
Sbjct: 336 GRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTC 395

Query: 363 NSTIHWLFAEGDVEGALFVLSDM--IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
              I     EG +  AL ++ ++      I PD + Y  L   LC       A  L  ++
Sbjct: 396 RVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDY--LVASLCEEDRPFAAKTLLERM 453

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            +   +     YN LI  LCK + +A A  L + ++V  + P+++TY  LI   C+ G  
Sbjct: 454 SQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRS 513

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTL 539
             A ++ E M     +P+  I  ++I+G C++     A+SLL   ++   + D+ +Y+TL
Sbjct: 514 IEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTL 573

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           +     +G +A+   +   M  VG A N +    +I+ L K
Sbjct: 574 VRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRK 614



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 179/385 (46%), Gaps = 39/385 (10%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+L++ A  K   ++E    + ++L+ G  P+V+  N ++N   +   +     ++ +MG
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG 244

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +    V+PNS T N + + FCK                                    G
Sbjct: 245 RVG---VIPNSYTFNILTHLFCK-----------------------------------DG 266

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             ++     ++M + G  P+ V YN+ I+     G +  A ++   M  + + PD  +Y+
Sbjct: 267 DIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYT 326

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC+ G V++A +L ++++   +  D  SYN LI   CK   +  +K LL  MI  
Sbjct: 327 ALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGN 386

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD  T   LI GY K G +  A+ +   ++K     +  IY+ ++  LC++    AA
Sbjct: 387 GIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAA 446

Query: 519 KSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K+LL+  SQR  +     YN LI        +A+A ++ +E+    I  N + Y  LI  
Sbjct: 447 KTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRC 506

Query: 578 LCKFGCYQQARELMKVMILHGIIPD 602
           LC+ G   +A +LM+ M+  G+ PD
Sbjct: 507 LCRMGRSIEAEKLMEEMLHFGLQPD 531



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 159/331 (48%), Gaps = 3/331 (0%)

Query: 321 DCNVRT--YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           DCN     +  L+  Y + G  +E  R   ++++ G +P+ +  N  ++ L     +   
Sbjct: 177 DCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLC 236

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             V  +M    + P+ +T++ILT   C++G + +      ++ EE    D  +YN LIN 
Sbjct: 237 WHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLING 296

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            C    L+ A  L   M  R ++PD+++Y  L++G CK G +  A Q+   M      P+
Sbjct: 297 YCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPD 356

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           +V YN++I G CK+  +  +KSLL      G+  D+ T   LI GY   G +  A  +  
Sbjct: 357 VVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVV 416

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
           E+   G++++   Y+ L+  LC+      A+ L++ M   G IP    Y  L+    K  
Sbjct: 417 ELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGD 476

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              + + L  ++V+  ++P+  TY A+I  L
Sbjct: 477 CVADALSLKAEIVVGNINPNLLTYKALIRCL 507



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 160/358 (44%), Gaps = 6/358 (1%)

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G  K G   F + +    + + I CN      L++G  +         +  EM + G++P
Sbjct: 196 GMIKEGFRTFMQILEVGYVPSVIACNY-----LLNGLLKSNHIHLCWHVYGEMGRVGVIP 250

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N+  +N   H    +GD++     L  M ++   PD  TY+ L  G C  G +  AF L+
Sbjct: 251 NSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLY 310

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
             +    ++ D  SY  L+N LCK   +  A QLL  M+ RGL PD+++Y TLI GYCK 
Sbjct: 311 RIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKE 370

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G +  +  +   M      P+      +I G  K+  L +A +L+   ++ G+ +    Y
Sbjct: 371 GKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIY 430

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + L+       +   A  +   M   G   +   YN LI  LCK  C   A  L   +++
Sbjct: 431 DYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVV 490

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
             I P+ +TY  L+    +     E  +L ++M+  G+ PD +   A+I     EK A
Sbjct: 491 GNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDA 548



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 147/316 (46%), Gaps = 18/316 (5%)

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI--------DKHICP---------DHFT 396
           GL P+ + Y   +H L    + E A+  L+++I        D   C          D   
Sbjct: 125 GLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQDCNWDPII 184

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           + +L K   + G +K+ F+   Q+LE   V    + N L+N L KSN++     +   M 
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG 244

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             G+IP+  T+  L   +CK G+I+      E M++   +P++V YN++ING C    L 
Sbjct: 245 RVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLS 304

Query: 517 AAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  L +   +R  L D ++Y  L+NG    G++ EA  +   M + G+  + V YN LI
Sbjct: 305 DAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLI 364

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
              CK G   +++ L+  MI +GI PD  T   L+  + K       + L  ++   GVS
Sbjct: 365 CGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVS 424

Query: 636 PDNQTYNAIISPLLGE 651
                Y+ +++ L  E
Sbjct: 425 ISPDIYDYLVASLCEE 440



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 9/152 (5%)

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           L KD   D  + L    Q     D I ++ L+  Y   G I E F  F ++  VG   + 
Sbjct: 159 LVKDTDEDVFQCLFLCCQDCNW-DPIIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSV 217

Query: 569 VGYNILINFLCKFG----CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           +  N L+N L K      C+    E+ +V    G+IP+  T+  L   F K+   +++ +
Sbjct: 218 IACNYLLNGLLKSNHIHLCWHVYGEMGRV----GVIPNSYTFNILTHLFCKDGDIDKMND 273

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             + M   G  PD  TYN +I+   G     D
Sbjct: 274 FLEKMEEEGFEPDIVTYNTLINGYCGRGRLSD 305


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 235/483 (48%), Gaps = 7/483 (1%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           +R   + G  E  +  ++ +  +G    I    + +    ++ +  +   + + +   G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V +V T+N++I   CK  +++ AL +  RM    + P+VV +N I+   C  G L+ A++
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +  +          P+ +T+  +I   CK   V  A ++   M   G   +V TY  LI+
Sbjct: 181 VLDRQ---LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 237

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  + G  +EA++  + M   G  PN + +N  +  + + G    A  +LSDM+ K   P
Sbjct: 238 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 297

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
              T++IL   LCR G + +A  +  ++       ++ SYN L++  CK   +  A + L
Sbjct: 298 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 357

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M+ RG  PDI+TY TL+   CK G ++ AV++   +      P L+ YN++I+GL K 
Sbjct: 358 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 417

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
              + A  LL   +R GL  D ITY++L++G    GK+ EA   F ++  +GI  N + Y
Sbjct: 418 GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 477

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N ++  LCK     +A + +  MI     P   TYT L+   +     +E ++L +++  
Sbjct: 478 NSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 537

Query: 632 SGV 634
            G+
Sbjct: 538 RGL 540



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 241/472 (51%), Gaps = 7/472 (1%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           N L  LV+  E+   +K  + MV  G + ++     +I   C+  K ++A  +   + +S
Sbjct: 62  NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 121

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+V+ +N++I+  C+ G+++ AL++  +M      +V P+ VT+N I+   C  G++
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM------NVAPDVVTYNTILRTLCDSGKL 175

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + A E+    ++     +V TY  LI+   +     +A++L DEM  +G  P+ V YN  
Sbjct: 176 KQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVL 235

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I+ +  EG ++ A+  L++M      P+  T++I+ + +C  G    A KL + +L +  
Sbjct: 236 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 295

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
                ++NILIN+LC+   L  A  +L  M + G  P+ ++Y  L+ G+CK   ++ A++
Sbjct: 296 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 355

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYF 544
             + M      P++V YN+++  LCKD  +D A  +L Q S +      ITYNT+I+G  
Sbjct: 356 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 415

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             GK   A  +  EMR  G+  + + Y+ L++ L + G   +A +    +   GI P+ +
Sbjct: 416 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 475

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           TY +++    K+   +  I+    M+     P   TY  +I  +  E  A++
Sbjct: 476 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKE 527



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 210/425 (49%), Gaps = 11/425 (2%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           A P V  ++ L+    + G  + A  V+ ++ V    V+   +N  L  L    ++ +  
Sbjct: 123 AVPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVT---YNTILRTLCDSGKLKQAM 179

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++    +      +V T+ ++I A CKE  + +A+ L   M   G  P+VV +N++IN  
Sbjct: 180 EVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGI 239

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ A+K    M         PN +THN I+   C  GR   AE++   M++ G  
Sbjct: 240 CKEGRLDEAIKFLNNM---PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 296

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+  LI+   R G    A+ + ++M   G  PN++ YN  +H    E  ++ A+  
Sbjct: 297 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 356

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+ +   PD  TY+ L   LC++G V  A ++ NQ+  +       +YN +I+ L K
Sbjct: 357 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 416

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A +LL  M  +GL PDIITY +L+ G  + G ++ A++ + +++ +  +PN + 
Sbjct: 417 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 476

Query: 502 YNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
           YNSI+ GLCK    D A   L    S+R    +A TY  LI G    G   EA  + +E+
Sbjct: 477 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA-TYTILIEGIAYEGLAKEALDLLNEL 535

Query: 560 RNVGI 564
            + G+
Sbjct: 536 CSRGL 540



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 201/395 (50%), Gaps = 7/395 (1%)

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+LE   K    M V  GD  +P+ +    +I GFC++G+ + A  +   + ++G   +V
Sbjct: 71  GELEDGFKFLESM-VYRGD--IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LI GY + G  + AL++ D M    + P+ V YN+ +  L   G ++ A+ VL  
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            + K   PD  TY+IL +  C+   V QA KL +++  +    D  +YN+LIN +CK   
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A + L++M   G  P++IT+  ++   C  G    A ++  +M +    P++V +N 
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN LC+   L  A  +L+     G   ++++YN L++G+    K+  A      M + G
Sbjct: 305 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
              + V YN L+  LCK G    A E++  +   G  P  +TY T++   SK    E  I
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 424

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +L D+M   G+ PD  TY++++S L  E   ++ +
Sbjct: 425 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 223/464 (48%), Gaps = 42/464 (9%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A N  L  LV+  E+    K  + M+  G + +V     +I   C+  K  +A  +   +
Sbjct: 109 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEIL 168

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
             SG  P+V+ +N++I   C+ G+++ AL++  +M      SV P+ VT+N I+   C  
Sbjct: 169 ENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM------SVAPDVVTYNTILRSLCDS 222

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G+++ A E+    ++     +V TY  LI+         +A++L DEM K+G  P+ V Y
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282

Query: 363 NSTIHWLFAEGDVEGAL-----------------------------------FVLSDMID 387
           N  I+ +  EG ++ A+                                    +L+DM+ 
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P   T++IL   LCR   + +A  +  ++ +   + ++ SYN L++  C+   +  
Sbjct: 343 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR 402

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A + L  M+ RG  PDI+TY TL+   CK G  + AV++   +      P L+ YN++I+
Sbjct: 403 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVID 462

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL K    + A  LL+  +R GL  D ITY+TL+ G    GK+ EA  +F +M  + I  
Sbjct: 463 GLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKP 522

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           + V YN ++  LCK     +A + +  M+  G  P   TYT L+
Sbjct: 523 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 215/427 (50%), Gaps = 7/427 (1%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+ +  L +  +LEE L    RM+  G  P+V+    +I   C+ G    A ++   M +
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRI---MEI 167

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +     +P+ +T+N +I G+CK G ++ A ++   M    +  +V TY T++      G 
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA+ + D  ++R   P+ + Y   I     +  V  A+ +L +M  K   PD  TY++
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G+C+ G + +A K  N +       +  ++NI++  +C +     A++LL+ M+ +G
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P ++T+  LI+  C+   +  A+ V E M K    PN + YN +++G C++  +D A 
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
             L+     G   D +TYNTL+     +GK   A  + +++ + G +   + YN +I+ L
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            K G  + A EL++ M   G+ PD +TY+TL+         +E I++  DM    + P  
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 639 QTYNAII 645
            TYNAI+
Sbjct: 525 VTYNAIM 531



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 207/405 (51%), Gaps = 7/405 (1%)

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N+ + +  + G+LE  LK   +M +  GD  +P+ +    +I GFC+ G+   A  I   
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERM-IYQGD--IPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +  +G   +V TY  LI GY + G  ++AL++ + M    + P+ V YN+ +  L   G 
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A+ VL   + +   PD  TY+IL +  C +  V QA KL +++ ++    D  +YN+
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN +CK   L  A + L++M + G  P++IT+  ++   C  G    A ++  +M +  
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P++V +N +IN LC+   L  A  +L+   + G + ++++YN L++G+    K+  A 
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
                M + G   + V YN L+  LCK G    A E++  +   G  P  +TY T++   
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +K    E   EL ++M   G+ PD  TY+ ++  L  E   ++ +
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 195/402 (48%), Gaps = 9/402 (2%)

Query: 144 ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           A P V  ++ L+    + G  + A  V++++ V    V+   +N  L  L    ++    
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVVT---YNTILRSLCDSGKLKEAM 229

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++    +      +V T+ ++I A C +  + +A+ L   M K G  P+VV +N++IN  
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G L+ A+K    M +       PN +THN I+   C  GR   AE +   M++ G  
Sbjct: 290 CKEGRLDEAIKFLNNMPLYG---CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCS 346

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V T+  LI+   R      A+ + ++M K G MPN++ YN  +H    E  ++ A+  
Sbjct: 347 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEY 406

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+ +   PD  TY+ L   LC++G    A ++ NQ+  +       +YN +I+ L K
Sbjct: 407 LEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A +LL  M  +GL PDIITY TL+ G    G ++ A++++ +M+ +  KP+ V 
Sbjct: 467 VGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVT 526

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLING 542
           YN+I+ GLCK      A   L      G      TY  LI G
Sbjct: 527 YNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 222/451 (49%), Gaps = 15/451 (3%)

Query: 129 LEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L+FLE ++   +I    P V    +L+R   + G T  A  +++ L+  G    +  +N 
Sbjct: 127 LKFLERMIYQGDI----PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K  EI +  ++ + M       +V T+N ++ +LC   KL+EA+ +  R ++  
Sbjct: 183 LIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE 239

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
            +P+V+ + ++I   C    +  A+KL  +M         P+ VT+N +ING CK GR++
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEM---RKKGCKPDVVTYNVLINGICKEGRLD 296

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A +    M   G   NV T+  ++      G   +A RL  +M+++G  P+ V +N  I
Sbjct: 297 EAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILI 356

Query: 367 HWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++L  +  +  A+ VL  M  KH C P+  +Y+ L  G C+   + +A +    ++    
Sbjct: 357 NFLCRKRLLGRAIDVLEKM-PKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             D  +YN L+  LCK     AA ++L+ +  +G  P +ITY T+IDG  K G  E A +
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYF 544
           + E M++   KP+++ Y++++ GL  +  +D A  +    + + +   A+TYN ++ G  
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
              + + A    + M   G    K  Y ILI
Sbjct: 536 KAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 127/255 (49%), Gaps = 4/255 (1%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           + F  +I  + L RNG +++  K   +++ +  + D  +   LI   C+S     A +++
Sbjct: 106 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             +   G +PD+ITY  LI GYCK G I+ A+QV E M      P++V YN+I+  LC  
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDS 222

Query: 513 ASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             L  A  +L +  QR    D ITY  LI     +  + +A  +  EMR  G   + V Y
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N+LIN +CK G   +A + +  M L+G  P+ +T+  ++          +   L  DM+ 
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342

Query: 632 SGVSPDNQTYNAIIS 646
            G SP   T+N +I+
Sbjct: 343 KGCSPSVVTFNILIN 357


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 221/430 (51%), Gaps = 14/430 (3%)

Query: 233 EEALSLYYRMLKSGIWPNVVC------FNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           E+A+ L++RM     W    C      FN ++N   Q G    AL+ +  +      ++ 
Sbjct: 113 EKAVDLFHRM-----WGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIH 167

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN++T N +I   C+LG V+ A E+   +       +  TY+TL+ G  +    +EA+ L
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            DEM   G  PN V +N  I  L  +GD+  A  ++ +M  K   P+  TY+ L  GLC 
Sbjct: 228 LDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCL 287

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +++A  L NQ++    V +  ++  LIN        +   ++L S+  RG   +   
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y +LI G CK G    A+++++ M      PN ++Y+++I+GLC++  LD A+  L   +
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G L ++ TY++L+ GYF  G   +A  ++ EM N     N+V Y+ILIN LCK G + 
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG--VSPDNQTYNA 643
           +A  + K M+  GI  D V Y++++  F      E+ ++L + M+  G  V PD  TYN 
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527

Query: 644 IISPLLGEKS 653
           +++    +KS
Sbjct: 528 LLNAFCIQKS 537



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 216/443 (48%), Gaps = 13/443 (2%)

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKS---GIWPNVVCFNMIINEACQVGDLEFA 270
           + V +FN V+  + +E     AL  Y  ++ S    I PN + FN++I   C++G ++ A
Sbjct: 130 QTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKA 189

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           +++FR++ +    +  P++ T++ +++G CK  R++ A  +   M   G   N+  +  L
Sbjct: 190 IEVFREIPL---RNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVL 246

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I    + G    A +L D M  +G +PN V YN+ +H L  +G +E A+ +L+ M+    
Sbjct: 247 ISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKC 306

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P+  T+  L  G    G      ++   +      G+ Y Y+ LI+ LCK      A +
Sbjct: 307 VPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAME 366

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M+ +G  P+ I Y  LIDG C+ G ++ A      MK     PN   Y+S++ G  
Sbjct: 367 LWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYF 426

Query: 511 KDASLDAAKSLL---QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           +    D+ K++L   + +    + + + Y+ LING   +GK  EA  ++ +M + GI ++
Sbjct: 427 EAG--DSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLD 484

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGII--PDYVTYTTLVTRFSKNCSPEEVIEL 625
            V Y+ +I+  C     +Q  +L   M+  G +  PD +TY  L+  F    S    I++
Sbjct: 485 VVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDI 544

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
            + M+  G  PD  T +  +  L
Sbjct: 545 LNIMLDQGCDPDFITCDIFLKTL 567



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 239/522 (45%), Gaps = 43/522 (8%)

Query: 20  FHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALE 79
           F  G Q  +    D+ F           + ++E  A SL    +  V+ + ++  ++ LE
Sbjct: 48  FKSGTQMGSYKLGDLSF-----------YSLIESHASSLDFRSLEEVLHQMKRERRVFLE 96

Query: 80  -----FYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEG 134
                 +   G+    +H  E +  + H +  W  F         + S NSV  +   EG
Sbjct: 97  KNFIVMFKAYGK----AHLPEKAVDLFHRM--WGEFQ----CKQTVKSFNSVLNVIVQEG 146

Query: 135 L----LDSYEICKATPAV--------FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
           L    L+ Y    A+ ++        F+ +++A  ++G  + A +V +++ ++  +   +
Sbjct: 147 LFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNY 206

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            ++  +  L K   I     L  EM   G   N+  FN++I ALCK+  L  A  L   M
Sbjct: 207 TYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNM 266

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              G  PN V +N +++  C  G LE A+ L  +M     +  +PN VT   +INGF   
Sbjct: 267 FLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM---VSNKCVPNDVTFGTLINGFVMQ 323

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GR      +  ++   G   N   Y++LI G  + G   +A+ L  EMV +G  PN +VY
Sbjct: 324 GRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVY 383

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           ++ I  L  EG ++ A   LS+M +K   P+ FTYS L +G    G   +A  +  ++  
Sbjct: 384 SALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMAN 443

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
            + + +   Y+ILIN LCK      A  +   M+ RG+  D++ Y ++I G+C    +E 
Sbjct: 444 NNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQ 503

Query: 483 AVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            ++++  M  +    +P+++ YN ++N  C   S+  A  +L
Sbjct: 504 GLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDIL 545



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 161/345 (46%), Gaps = 19/345 (5%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F  L+      G       V+  L+ +GH  + + +++ +S L K  +  +  
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+KEMV  G   N   ++ +I  LC+E KL+EA      M   G  PN   ++ ++   
Sbjct: 366 ELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGY 425

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + GD   A+ ++++M   + ++ + N V ++ +ING CK G+   A  +   M+  GI 
Sbjct: 426 FEAGDSHKAILVWKEM---ANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIK 482

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGAL 379
            +V  Y+++I G+      E+ L+L ++M+ +G  + P+ + YN  ++    +  +  A+
Sbjct: 483 LDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAI 542

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +L+ M+D+   PD  T  I  K L  N    Q  +   + L+E           L+  L
Sbjct: 543 DILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGR---EFLDE-----------LVVRL 588

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
            K      A +++  M+ + L+P   T+  ++   CK  N+  A+
Sbjct: 589 VKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAI 633



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 4/257 (1%)

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
           + + G   +A + +N V+    +    +A ++N++I  +C+   +  A ++   + +R  
Sbjct: 142 IVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNC 201

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD  TY TL+ G CK   I+ AV + + M+     PNLV +N +I+ LCK   L  A  
Sbjct: 202 APDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAK 261

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L+      G + + +TYN L++G  + GK+ +A ++ ++M +     N V +  LIN   
Sbjct: 262 LVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFV 321

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G       ++  +   G   +   Y++L++   K     + +EL  +MV  G  P+  
Sbjct: 322 MQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTI 381

Query: 640 TYNAIISPLLGEKSAED 656
            Y+A+I  L  E   ++
Sbjct: 382 VYSALIDGLCREGKLDE 398



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 4/197 (2%)

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENM---KKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
           + ++ ++++   + G    A++ Y ++   K +   PN + +N +I  +C+   +D A  
Sbjct: 132 VKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIE 191

Query: 521 LLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           + +    R    D  TY+TL++G     +I EA ++  EM+  G   N V +N+LI+ LC
Sbjct: 192 VFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALC 251

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A +L+  M L G +P+ VTY  LV         E+ + L + MV +   P++ 
Sbjct: 252 KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDV 311

Query: 640 TYNAIISPLLGEKSAED 656
           T+  +I+  + +  A D
Sbjct: 312 TFGTLINGFVMQGRASD 328


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 217/418 (51%), Gaps = 10/418 (2%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +FN +    CK  K++E + +Y  ++     PNV+ +   I+  C+VGDL+   K F++M
Sbjct: 44  SFNALFNGFCKR-KMKEEVFIYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEM 102

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                D ++PN +   C+I+G+ K+G ++FA ++   M K+    NV TYA LI+G+ + 
Sbjct: 103 ---RKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKR 159

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  E A     +M++ G+MPN+ VY S I   F +G+++ A+   S+M  +    D   Y
Sbjct: 160 GMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAY 219

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
            ++  GL  NG + +  ++   ++   +  D      L++   K+ N  AA  +   ++ 
Sbjct: 220 GVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLN 279

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           RG  PD +T  +LIDG CK G    A   +      ++K N V Y ++I+G+CK+ +LD 
Sbjct: 280 RGFEPDAVTISSLIDGLCKDGRYHDAKGYF-----CKEKANEVSYTALIDGICKEGNLDE 334

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
            + ++      G + D   Y + I      GKI EAF + ++M   GI ++ + Y+ LI 
Sbjct: 335 VERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEGIDLDLLTYSSLIF 394

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
            L   G   +A++L   M+  GIIPD + +  L+  + K  +P  +  LH++M   G+
Sbjct: 395 GLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAISHLHEEMRRRGL 452



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 180/368 (48%), Gaps = 15/368 (4%)

Query: 286 LPNSVTHNCIINGFCKLGRVEFA----EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
           LP+ VT+N +I+G+CK G+VE A    + IR A  +     ++ ++  L +G+ +    E
Sbjct: 4   LPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRV----DLVSFNALFNGFCKRKMKE 59

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           E       M K   +PN + Y + I  L   GD++       +M    I P+   ++ L 
Sbjct: 60  EVFIYMGLMWK-CCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLI 118

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            G  + G +  A++L+  + +   + + Y+Y  LIN  CK   L  A+     M+  G++
Sbjct: 119 DGYSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIM 178

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P+   Y ++IDG+ K GNI+ A++ +  M+K   + ++V Y  +I+GL  +  LD    +
Sbjct: 179 PNSTVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEV 238

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           ++   R GL  D +   TL++ +F  G    A+ ++ E+ N G   + V  + LI+ LCK
Sbjct: 239 MEDMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCK 298

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G Y  A+             + V+YT L+    K  + +EV  +  +M  SG  PD   
Sbjct: 299 DGRYHDAKGY-----FCKEKANEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFV 353

Query: 641 YNAIISPL 648
           Y + I+ L
Sbjct: 354 YTSWIAEL 361



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 178/385 (46%), Gaps = 35/385 (9%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +  ++  L K+ ++   +K +KEM   G V N+  F  +I    K   L+ A  LY  M
Sbjct: 78  TYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDM 137

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            KS   PNV  +  +IN  C+ G LE A   F KM  +    ++PNS  +  II+G  K 
Sbjct: 138 CKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVG---IMPNSTVYTSIIDGHFKK 194

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G ++ A +    M K     ++  Y  +I G    G  ++ L + ++MV+ GL P+ VV 
Sbjct: 195 GNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVL 254

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG---------CVKQA 413
            + +H  F  G+ + A  V  +++++   PD  T S L  GLC++G         C ++A
Sbjct: 255 TTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKA 314

Query: 414 FKLHNQVL---------------------EEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
            ++    L                     E   V D + Y   I  LC+   +  A ++ 
Sbjct: 315 NEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVK 374

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           + M+  G+  D++TY +LI G    G +  A Q++++M K    P+ ++++ +I G  K 
Sbjct: 375 NKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQ 434

Query: 513 ASLDAAKSLLQASQRIGLL--DAIT 535
            +  A   L +  +R GLL  D IT
Sbjct: 435 DNPVAISHLHEEMRRRGLLTIDKIT 459



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 154/304 (50%), Gaps = 2/304 (0%)

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G +P+ V YNS I      G VE A   +  + +     D  +++ L  G C+    ++ 
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEV 61

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F ++  ++ +  + +  +Y   I+ LCK  +L    +    M   G++P++I +  LIDG
Sbjct: 62  F-IYMGLMWKCCLPNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y K GN++ A Q+Y++M K    PN+  Y ++ING CK   L+ A+        +G++ +
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           +  Y ++I+G+F  G I  A   FSEMR     ++ V Y ++I+ L   G   +  E+M+
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVME 240

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            M+ +G+ PD V  TTL+    K  + +    ++ +++  G  PD  T +++I  L  + 
Sbjct: 241 DMVRNGLAPDKVVLTTLMHAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDG 300

Query: 653 SAED 656
              D
Sbjct: 301 RYHD 304



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 12/326 (3%)

Query: 140 EICKAT--PAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           ++CK+   P V+   AL+    + G  E A     K+   G   +   + + +    K  
Sbjct: 136 DMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKG 195

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
            I    K + EM    +  ++  + +VI  L    +L++ L +   M+++G+ P+ V   
Sbjct: 196 NIDVAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLT 255

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +++   + G+ + A  ++R++         P++VT + +I+G CK GR   A+   +  
Sbjct: 256 TLMHAHFKAGNTKAAYGVYREL---LNRGFEPDAVTISSLIDGLCKDGRYHDAKGY-FCK 311

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
            KA    N  +Y  LIDG  + G+ +E  R+  EM + G +P+  VY S I  L  +G +
Sbjct: 312 EKA----NEVSYTALIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKI 367

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  V + M+++ I  D  TYS L  GL   G + +A +L + +L+  ++ D+  ++IL
Sbjct: 368 VEAFKVKNKMVEEGIDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDIL 427

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLI 461
           I    K +N  A   L   M  RGL+
Sbjct: 428 IRGYLKQDNPVAISHLHEEMRRRGLL 453


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 244/487 (50%), Gaps = 5/487 (1%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           ++ K  + ++  +++ +  LVK  +    +K+ +EM++ G   +V  FN V+    +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +E+A  +Y  M++SG  P+ V ++++I+   ++G L+ +LK+  +M VM G +  P+   
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM-VMRGQT--PSMQA 117

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ ++    K  RV+ A  +   MI+ G   +   +  LI G  + G  ++A     +M 
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K G  PN  VYN  +H L + G +E A  + ++M      PD  TY+ L   +C+   V+
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +  KL   +     V +  +++ LI+ LC++  L  A ++  SM+  G  P+  TY TLI
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 297

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGL 530
            G C+   +  A +++E M +    P+ V YNS+I G CK  S+D A+ L  + S   GL
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 357

Query: 531 LDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
              I T+NTLI+G+   GK+  A  + +EM   G+A +   Y ILI  L +     +A E
Sbjct: 358 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALE 417

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + K M     + D V+  + V    K  + ++   + +    SG  P+ +T+  +   L+
Sbjct: 418 VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLI 477

Query: 650 GEKSAED 656
                ED
Sbjct: 478 KLGRVED 484



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 222/453 (49%), Gaps = 5/453 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ +++   +    E A +V Q +   G+     +++  +  L K+ ++    
Sbjct: 41  CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESL 100

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K+  EMV  G   ++  ++ ++ AL K  +++ A SL+  M++ G  P+ + F  +I   
Sbjct: 101 KILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGL 160

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G ++ A + F++M         PN   +N +++G C  G++E A  +   M      
Sbjct: 161 CQAGKVKDASERFKQM---PKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCS 217

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY TL+D   +    EE  +L + M   G +PN + +++ IH L   G++E AL V
Sbjct: 218 PDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 277

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M++    P+ +TY+ L  GLCR   V QA +L  ++ +  +  DA +YN LI   CK
Sbjct: 278 FGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 337

Query: 442 SNNLAAAKQLLSSMIV-RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             ++  A++L   M    GL P I+T+ TLIDG+CK G +  A ++   M       +  
Sbjct: 338 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSC 397

Query: 501 IYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  +I GL +   LD A  +  Q  ++  LLD ++  + + G    G I +A+A+F   
Sbjct: 398 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 457

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           R  G   N   + IL   L K G  + A++LM+
Sbjct: 458 RKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 190/419 (45%), Gaps = 49/419 (11%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    +IG  + +  ++ ++ ++G + S+ A+++ +  L K   +     L+ EM+
Sbjct: 83  YHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMI 142

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G+  +   F  +I  LC+  K+++A   + +M K G  PNV  +N++++  C  G LE
Sbjct: 143 RGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLE 202

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  LF +M      S  P+ VT+N +++  CK  RVE   ++  AM  AG   NV T++
Sbjct: 203 QANTLFAEM---KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFS 259

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI G  R G  E+AL +   M++ G  PN   Y + I  L     V  A  +   M   
Sbjct: 260 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQA 319

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA------YSYNILINYLCKS 442
            I PD   Y+ L  G C+ G + +A KL+ +     M G A       ++N LI+  CK 
Sbjct: 320 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE-----MSGGAGLQPTIVTFNTLIDGFCKL 374

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLI------------------------------- 471
             L  A +L++ M  +GL  D  TY  LI                               
Sbjct: 375 GKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 434

Query: 472 ----DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
                G CK GNI+ A  V+E  +K    PN   +  +   L K   ++ A+ L++ ++
Sbjct: 435 VSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 493



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 180/389 (46%), Gaps = 22/389 (5%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLM-SANSVSPLEFLEGLL---------DSYE 140
           + S+++  ++V  L   RR D A  L   ++   +    L F E +L         D+ E
Sbjct: 112 TPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASE 171

Query: 141 ICKATP--------AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             K  P         V++ L+      G  E A  +  ++K    S  +  +N  L  + 
Sbjct: 172 RFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVC 231

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K   +    KL++ M + GYV NV TF+ +I+ LC+  +LE+AL ++  ML++G  PN  
Sbjct: 232 KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 291

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+  C+   +  A +LF K   M+   + P++V +N +I G+CK G ++ AE++ 
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEK---MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 348

Query: 313 YAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
             M   AG+   + T+ TLIDG+ + G    A  L  EM  +GL  ++  Y   I  L  
Sbjct: 349 REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSR 408

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
              ++ AL V   M +K    D  +      GLC+ G + QA+ +     +   V +  +
Sbjct: 409 ATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPET 468

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGL 460
           + IL   L K   +  A++L+     R +
Sbjct: 469 FRILSESLIKLGRVEDAQKLMEPAKARDI 497


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 226/453 (49%), Gaps = 7/453 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK--SGIWPNVVCFNMIINE 260
           L   M   G   +  +++ V+ +LC++ + + AL L + M+K   G  PNVV +N +I+ 
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G++  A  LF +M       V+P+ VT++  I+  CK   ++ AE +   MI  G 
Sbjct: 237 FFREGEVSKACNLFHEM---MQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGF 293

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + +  TY  +I GY+  G  +E   +  EM +RGLMP+    NS +  L   G  + A  
Sbjct: 294 EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAE 353

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
               M  K   PD  TYS+L  G    G V     L N +    +V D   YNILI+   
Sbjct: 354 FFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYG 413

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +  A  + + M  RG++PD  TYGT+I  + + G +  A+  +  M  +  KP+ +
Sbjct: 414 KRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTI 473

Query: 501 IYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           +YNS+I G C   +L  AK L+    S+ I   + + +N++IN     G++ EA  +F  
Sbjct: 474 VYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDL 533

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           + ++G   + + +N LI+     G  ++A  ++  MI  GI PD VTY+ L+  + +N  
Sbjct: 534 VIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGR 593

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            ++ + L  +M+  GV P   TY  I+  L  +
Sbjct: 594 IDDGLILFREMLSKGVKPTTITYGIILHGLFND 626



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 257/547 (46%), Gaps = 42/547 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKL--KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +  ++++  +   ++ A D++  +  K  G S ++ ++N  +    +  E+ +   L+ E
Sbjct: 193 YSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHE 252

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G V +V T++  I ALCK   +++A  +  +M+ +G  P+ V +N +I+    +G 
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQ 312

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    +FR+M   +   ++P+  T N  ++  CK G+ + A E   +M   G   ++ T
Sbjct: 313 WKETAGMFREM---TRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVT 369

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+ L+ GYA  G   + L L + M   G++ ++ VYN  I      G ++ A+ + + M 
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ 429

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ + PD +TY  +     R G +  A    NQ++   +  D   YN LI   C   NL 
Sbjct: 430 ERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLV 489

Query: 447 AAKQLLSSMIVRGLI------------------------------------PDIITYGTL 470
            AK+L+S M+ RG+                                     PD+IT+ +L
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSL 549

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDGY   G +E A  V + M  V  +P++V Y+++++G C++  +D    L +     G+
Sbjct: 550 IDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGV 609

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
               ITY  +++G F +G+   A  M  EM   G  ++     I++  LC+  C  +A  
Sbjct: 610 KPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIA 669

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L K +    +  +     T++    K    EE  EL D +  +G+ P+  TY  +I+ LL
Sbjct: 670 LFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLL 729

Query: 650 GEKSAED 656
            E S E+
Sbjct: 730 KEGSVEE 736



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 245/509 (48%), Gaps = 20/509 (3%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE-----------IGRFW 201
           VRA T   +TE  + +  +L  +   V   A N FL+ L +              +  F 
Sbjct: 46  VRAGTL--STEDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSLAVALFN 103

Query: 202 KLYKEMVSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           ++ +E       +  V T+N+++   C+  +     +L+ R LK+G+  +V+  N+++  
Sbjct: 104 RICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKC 163

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C     + A+ +   +  M    V P++++++ ++   C+  R + A ++ + M+K   
Sbjct: 164 LCHAKRSDDAVNVL--LHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSG 221

Query: 321 DC--NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            C  NV +Y T+I G+ R G   +A  L  EM+++G++P+ V Y+S I  L     ++ A
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             VL  MI     PD  TY+ +  G    G  K+   +  ++    ++ D ++ N  ++ 
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSS 341

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
           LCK      A +   SM  +G  PD++TY  L+ GY   G +   + ++ +M+      +
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
             +YN +I+   K   +D A  +    Q  G++ DA TY T+I  +   G++A+A   F+
Sbjct: 402 HSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFN 461

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII-PDYVTYTTLVTRFSKN 616
           +M  +G+  + + YN LI   C  G   +A+EL+  M+  GI  P+ V + +++    K 
Sbjct: 462 QMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKE 521

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAII 645
               E  ++ D ++  G  PD  T+N++I
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLI 550



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 202/418 (48%), Gaps = 5/418 (1%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A  +V++ L+ A  + G  + A  +  +++ +G       +   ++   ++  +      
Sbjct: 400 ADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDK 459

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI-WPNVVCFNMIINEAC 262
           + +M++ G   +   +N +I   C    L +A  L   M+  GI  PN V FN IIN  C
Sbjct: 460 FNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLC 519

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +  A  +F  + +  G+   P+ +T N +I+G+  +G++E A  +  AMI  GI+ 
Sbjct: 520 KEGRVVEAQDIF-DLVIHIGER--PDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP 576

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY+ L+DGY R G  ++ L L  EM+ +G+ P  + Y   +H LF +G   GA  + 
Sbjct: 577 DVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +MI+     D  T  I+  GLCRN C  +A  L  ++   ++  +    N +I+ + K 
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                A +L  S+   GL+P+  TYG +I    K G++E A  ++  M+K    P+  + 
Sbjct: 697 RKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 503 NSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
           N+II  L +   +  A + L +   +   L+A T + +++ +   GK  E       M
Sbjct: 757 NNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAM 814



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 215/467 (46%), Gaps = 5/467 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G ++ A +    +  KGH   +  ++  L        +     L+  M   G V + + +
Sbjct: 346 GKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVY 405

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I A  K   ++EA+ ++ +M + G+ P+   +  +I    ++G L  A+  F +M  
Sbjct: 406 NILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIA 465

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID-CNVRTYATLIDGYARGG 338
           M    + P+++ +N +I GFC  G +  A+E+   M+  GI   N   + ++I+   + G
Sbjct: 466 MG---LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              EA  + D ++  G  P+ + +NS I      G +E A  VL  MI   I PD  TYS
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G CRNG +     L  ++L + +     +Y I+++ L        AK++   MI  
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G   DI T G ++ G C+    + A+ +++ +  +  K N+ I N++I+ + K    + A
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L  +    GL+ +A TY  +I      G + EA  MFS M   G A +    N +I  
Sbjct: 703 NELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRV 762

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
           L + G   +A   +  +    I  +  T + +++ FS+     E I+
Sbjct: 763 LLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIK 809



 Score = 45.4 bits (106), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 20/237 (8%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R DD L+L   ++S                    K T   +  ++      G T GA  +
Sbjct: 593 RIDDGLILFREMLSKG-----------------VKPTTITYGIILHGLFNDGRTVGAKKM 635

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
             ++   G ++ I      L  L + N       L+K++ +     N+   N +I A+ K
Sbjct: 636 CHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYK 695

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             K EEA  L+  +  +G+ PN   + ++I    + G +E A  +F    +M      P+
Sbjct: 696 VRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMF---SLMEKSGCAPS 752

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           S   N II    + G +  A      +    I     T + ++  ++R G   E ++
Sbjct: 753 SRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIK 809


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 185/705 (26%), Positives = 295/705 (41%), Gaps = 97/705 (13%)

Query: 35  VFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSL 94
           V  +I   L  ++W+ L QMA         +     +   KLAL     + + +      
Sbjct: 57  VESSIITVLAMQRWETLSQMA--------YKSGKLDKAHGKLALRMLDSIVQQSGLDRIT 108

Query: 95  ESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALV 153
              C  VH+LV  +    A+ ++ +L +    S       LL +   C  T     D LV
Sbjct: 109 HIYCMAVHILVQAQMPSQAMSVLRHL-ALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLV 167

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
            A  + G    A   I  +   G   S+ + NN L+ LV +N+    W   KE +   + 
Sbjct: 168 NAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFP 227

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V T N+V+ +LC + KL +A S+  +M K+   PN V +N I+N   + G  + AL++
Sbjct: 228 LDVTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRI 286

Query: 274 FRKM---GV-----------------------------MSGDSVLPNSVTHNCIINGFCK 301
              M   G+                             M   ++ P+  ++N +I+GF  
Sbjct: 287 LDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFG 346

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV- 360
            G++  A  I   M++  +  +V TY  LIDGY R G ++EA R+  EM   G+ P  V 
Sbjct: 347 EGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVS 406

Query: 361 --------------------------------------------------VYNSTIHWLF 370
                                                              +N  I    
Sbjct: 407 KAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYC 466

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G+V  A  V  +M+     PD  TY  L +GLC+ G + QA +    +LE+    D  
Sbjct: 467 QRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEK 526

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           + N L+  +CK   L  A  L   M+ R ++PD  TY  L+DG+CK G +  A+ + + M
Sbjct: 527 TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 586

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ-RIGLL-DAITYNTLINGYFINGK 548
            +    P+ + Y  ++NGL  +  + AA  + Q    + GL  D I YN+++NGY   G+
Sbjct: 587 LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQ 646

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I E   +   M    +  +   YNIL++   K G   +   L + M+  GI PD VTY  
Sbjct: 647 INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRL 706

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           L+    +    E  ++  + MVL GV PDN  ++ +I     EKS
Sbjct: 707 LIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKA-FSEKS 750



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 264/537 (49%), Gaps = 24/537 (4%)

Query: 133 EGLLDSYEICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           E +L   + C+   AV ++ ++    + G  + A  ++  ++  G    ++ +N  +  L
Sbjct: 250 ESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            KL    R + L K M       +  ++N +I+    E K+  A+ ++ +ML+  + P+V
Sbjct: 310 CKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSV 369

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGV-----------------MSGDSVLPNSVTHNC 294
             +  +I+  C+ G  + A ++  +M +                 M  D + P+ +T++ 
Sbjct: 370 ATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSA 429

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +IN     G +  AE+ +  M +  I  +V ++  +ID Y + G+  EA  + D MV+ G
Sbjct: 430 LINE----GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHG 485

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P+   Y S +  L   G +  A   +  +++K    D  T + L  G+C++G + +A 
Sbjct: 486 WPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEAL 545

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L  +++  +++ D Y+Y IL++  CK   +  A  LL  M+ +GL+PD I Y  L++G 
Sbjct: 546 DLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGL 605

Query: 475 CKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
              G ++ A  +++ +   E    + + YNS++NG  K   ++  + L++      +   
Sbjct: 606 VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPS 665

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + +YN L++GY   G+++    ++ +M   GI  + V Y +LI  LC++G  + A + ++
Sbjct: 666 SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 725

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            M+L G+ PD + +  L+  FS+       ++L   M    +SP ++TY A+++ L+
Sbjct: 726 KMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLI 782



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 252/533 (47%), Gaps = 52/533 (9%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL------SHLVKLNEIGRF 200
           A F+ ++ +  Q G    A+ V   +   G    I  + + L       HLV+  E    
Sbjct: 456 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE---- 511

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +Y    +C   E   T N ++  +CK   L+EAL L  +M+   I P+   + ++++ 
Sbjct: 512 FMVYLLEKACAIDEK--TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 569

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAG 319
            C+ G +  AL L +   +M    ++P+++ + C++NG    G+V+ A  +   +I K G
Sbjct: 570 FCKRGKVVPALILLQ---MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 626

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +   Y ++++GY +GG   E  RL   M +  + P++  YN  +H    +G +   L
Sbjct: 627 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 686

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK-LHNQVLEE--------------- 423
           ++  DM+ + I PD+ TY +L  GLC  G ++ A K L   VLE                
Sbjct: 687 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 746

Query: 424 -------------------HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
                              HM   + +Y  ++N L + N L  + ++L  M+  GL P  
Sbjct: 747 SEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKH 806

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
             Y  LI+  C+ G+I+GA ++ E+MK +   P+ V  +SI+ GLCK   ++ A  +  +
Sbjct: 807 THYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS 866

Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             R G++  I T+ TL++G     KI +AF +   M + G+ V+ V YN+LI  LC   C
Sbjct: 867 IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKC 926

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
              A +L + M   G++P+  TY TL        + ++  +L  D+   G+ P
Sbjct: 927 ICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 234/491 (47%), Gaps = 7/491 (1%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           LL G     + V   EF+  LL+  + C       + L+    + G  + A D+ +K+  
Sbjct: 496 LLRGLCQGGHLVQAKEFMVYLLE--KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 553

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +      + +   L    K  ++     L + M+  G V +   +  ++  L  E +++ 
Sbjct: 554 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 613

Query: 235 ALSLYYRML-KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           A  ++  ++ K G++ + + +N ++N   + G +    +L R M     + V P+S ++N
Sbjct: 614 ASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM---HENEVYPSSASYN 670

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +++G+ K G++     +   M+K GI  +  TY  LI G    G  E A++  ++MV  
Sbjct: 671 ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 730

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P+N+ ++  I     +  +  AL + S M   H+ P   TY  +  GL R   ++Q+
Sbjct: 731 GVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQS 790

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           +++ + ++E  +      Y  LIN  C+  ++  A +L   M   G++P  +   +++ G
Sbjct: 791 YEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRG 850

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
            CK G +E A+ V+ ++ +    P +  + ++++GLCK+  +D A  L Q  +  GL +D
Sbjct: 851 LCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 910

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +TYN LI G      I +A  ++ EM++ G+  N   Y  L   +   G  Q   +L+K
Sbjct: 911 VVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLK 970

Query: 593 VMILHGIIPDY 603
            +   GI+P Y
Sbjct: 971 DIEDRGIVPSY 981



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 142/599 (23%), Positives = 272/599 (45%), Gaps = 21/599 (3%)

Query: 64  NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWR----RFDDALLLMGN 119
           N ++  F    K+ L  Y +   N     SL+ S A    L++      R D+A  ++  
Sbjct: 338 NTLIHGFFGEGKINLAIYIF---NQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394

Query: 120 LMSANSVSPLEFLEG--LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVK 175
            M    V P E  +   +L         P V  + AL+     I   E     + ++K+ 
Sbjct: 395 -MQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINE-GMIAEAEQFKQYMSRMKI- 451

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
             S  + ++N  +    +   +   + +Y  MV  G+  ++ T+  ++  LC+   L +A
Sbjct: 452 --SFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 509

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
                 +L+     +    N ++   C+ G L+ AL L  KM      ++LP++ T+  +
Sbjct: 510 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT---RNILPDTYTYTIL 566

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV-KRG 354
           ++GFCK G+V  A  +   M++ G+  +   Y  L++G    G  + A  +  E++ K G
Sbjct: 567 LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 626

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L  + + YNS ++     G +     ++ +M +  + P   +Y+IL  G  + G + +  
Sbjct: 627 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 686

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L+  +++E +  D  +Y +LI  LC+   +  A + L  M++ G+ PD + +  LI  +
Sbjct: 687 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 746

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
            +   +  A+Q++  MK +   P+   Y +++NGL +   L  +  +L      GL    
Sbjct: 747 SEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKH 806

Query: 535 T-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           T Y  LIN     G I  AF +  +M+ +G+  ++V  + ++  LCK G  ++A  +   
Sbjct: 807 THYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS 866

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           ++  G++P   T+TTL+    K    ++   L   M   G+  D  TYN +I+ L  +K
Sbjct: 867 IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKK 925


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 203/399 (50%), Gaps = 4/399 (1%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N +I  L  +  +++A  L   M   GI P VV +N +I+   Q G +E A   F +M
Sbjct: 310 TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEM 369

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    + P+ +T+N ++NG+CK G ++ A  +   +  AG+   V TY  LIDGY R 
Sbjct: 370 RAMG---LQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  EEA RL +EMV++G +P+   Y   +        +  A     +M+ K + PD F Y
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +   +     G + +AF+L   ++ E +  D  +YNILI+ LCK+ NL  AK L   M+ 
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL PD ITY  LI  +C+ G +  A + +++M      P+ V Y   I+  C+  +L +
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A    +     G+  + ITYN LI+     G+   A+  F EM   G+  NK  Y +LI+
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             CK G ++ A      M  +GI PDY+T+  L   F +
Sbjct: 667 GNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDE 705



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 234/479 (48%), Gaps = 38/479 (7%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM--LKSGIWPNVVCFNMIINE 260
           ++ EM+  G   ++ T+N ++ +  KE + ++   L   M    SG  PN V  N++I  
Sbjct: 224 VHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITG 283

Query: 261 ACQVGDLEFALKLFRKMGV-------------------------------MSGDSVLPNS 289
             + GDLE A ++   M +                               M  + ++P  
Sbjct: 284 LARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTV 343

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           VT+N +I+G  + G+VE A ++++  ++A G+  +V TY +L++GY + GS +EAL L  
Sbjct: 344 VTYNAMIHGLLQSGQVE-AAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFG 402

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           ++   GL P  + YN  I      GD+E A  +  +M+++   PD  TY+IL KG   N 
Sbjct: 403 DLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKG-SHNA 461

Query: 409 C-VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           C +  A +  +++L + +  D ++YN  I        +A A +L   M++ G+  D +TY
Sbjct: 462 CSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTY 521

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LIDG CK GN+  A  +   M     +P+ + Y  +I+  C+   L  A+   +    
Sbjct: 522 NILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMIS 581

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL   A+TY   I+ Y   G +  A+  F +M   G+  N++ YN+LI+ LC+ G  Q 
Sbjct: 582 DGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQL 641

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           A      M+  G++P+  TYT L+    K  + E+ +  + +M  +G+ PD  T+ A+ 
Sbjct: 642 AYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALF 700



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 221/491 (45%), Gaps = 38/491 (7%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EM S G   +V   N V+  L    + ++  +++  ML+ GI P++V +N +++   +
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G  +    L ++M    G   LPN VTHN +I G  + G +E A E+   M +     +
Sbjct: 250 EGRNDKVAMLLKEMET-RGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKAS 307

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY  LI G    G  ++A  L  EM   G+MP  V YN+ IH L   G VE A     
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M    + PD  TY+ L  G C+ G +K+A  L   +    +     +YNILI+  C+  
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN----- 498
           +L  A++L   M+ +G +PD+ TY  L+ G     ++  A + ++ M     +P+     
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 499 ------------------------------LVIYNSIINGLCKDASLDAAKSLLQASQRI 528
                                          V YN +I+GLCK  +L+ AK L       
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN 547

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY  LI+ +   G + EA   F +M + G+A + V Y + I+  C+ G    A
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSA 607

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
               + M+  G+ P+ +TY  L+    +    +       +M+  G+ P+  TY  +I  
Sbjct: 608 YGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDG 667

Query: 648 LLGEKSAEDQV 658
              E + ED +
Sbjct: 668 NCKEGNWEDAM 678



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 194/412 (47%), Gaps = 35/412 (8%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E +EG+  S    KA+   ++ L+      G  + A D+  +++ +G   ++  +N  + 
Sbjct: 295 EMVEGMRLSK---KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIH 351

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L++  ++      + EM + G   +V T+N ++   CK   L+EAL L+  +  +G+ P
Sbjct: 352 GLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAP 411

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMG-------------VMSG-------------- 282
            V+ +N++I+  C++GDLE A +L  +M              +M G              
Sbjct: 412 TVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFF 471

Query: 283 DSVL-----PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           D +L     P+   +N  I     LG +  A  +R  M+  GI  +  TY  LIDG  + 
Sbjct: 472 DEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKT 531

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G+  +A  L  +MV  GL P+ + Y   IH     G +  A     DMI   + P   TY
Sbjct: 532 GNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTY 591

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           ++     CR G +  A+    ++LEE +  +  +YN+LI+ LC++     A +    M+ 
Sbjct: 592 TVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLE 651

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           RGL+P+  TY  LIDG CK GN E A++ Y  M +    P+ + + ++  G 
Sbjct: 652 RGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 170/342 (49%), Gaps = 4/342 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+    + G+ + A  +   L+  G + ++  +N  +    +L ++    +L +EM
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G + +V T+ +++      C L  A   +  ML  G+ P+   +N  I     +G +
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAI 499

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
               K FR   VM  + +  ++VT+N +I+G CK G +  A++++  M+  G+  +  TY
Sbjct: 500 A---KAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITY 556

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI  +   G   EA +   +M+  GL P+ V Y   IH     G++  A      M++
Sbjct: 557 TCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLE 616

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P+  TY++L   LCR G  + A++  +++LE  +V + Y+Y +LI+  CK  N   
Sbjct: 617 EGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWED 676

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           A +    M   G+ PD +T+  L  G+ + G++  A++  EN
Sbjct: 677 AMRFYFEMHQNGIHPDYLTHKALFKGFDE-GHMNHAIEYLEN 717


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 235/483 (48%), Gaps = 7/483 (1%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           +R   + G  E  +  ++ +  +G    I    + +    ++ +  +   + + +   G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           V +V T+N++I   CK  +++ AL +  RM    + P+VV +N I+   C  G L+ A++
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           +  +          P+ +T+  +I   CK   V  A ++   M   G   +V TY  LI+
Sbjct: 238 VLDRQ---LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 294

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  + G  +EA++  + M   G  PN + +N  +  + + G    A  +LSDM+ K   P
Sbjct: 295 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 354

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
              T++IL   LCR G + +A  +  ++       ++ SYN L++  CK   +  A + L
Sbjct: 355 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 414

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             M+ RG  PDI+TY TL+   CK G ++ AV++   +      P L+ YN++I+GL K 
Sbjct: 415 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 474

Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
              + A  LL   +R GL  D ITY++L++G    GK+ EA   F ++  +GI  N + Y
Sbjct: 475 GKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 534

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N ++  LCK     +A + +  MI     P   TYT L+   +     +E ++L +++  
Sbjct: 535 NSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCS 594

Query: 632 SGV 634
            G+
Sbjct: 595 RGL 597



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 241/472 (51%), Gaps = 7/472 (1%)

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
           N L  LV+  E+   +K  + MV  G + ++     +I   C+  K ++A  +   + +S
Sbjct: 119 NHLRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 178

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G  P+V+ +N++I+  C+ G+++ AL++  +M      +V P+ VT+N I+   C  G++
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM------NVAPDVVTYNTILRTLCDSGKL 232

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + A E+    ++     +V TY  LI+   +     +A++L DEM  +G  P+ V YN  
Sbjct: 233 KQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVL 292

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I+ +  EG ++ A+  L++M      P+  T++I+ + +C  G    A KL + +L +  
Sbjct: 293 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGC 352

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
                ++NILIN+LC+   L  A  +L  M + G  P+ ++Y  L+ G+CK   ++ A++
Sbjct: 353 SPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIE 412

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYF 544
             + M      P++V YN+++  LCKD  +D A  +L Q S +      ITYNT+I+G  
Sbjct: 413 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 472

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             GK   A  +  EMR  G+  + + Y+ L++ L + G   +A +    +   GI P+ +
Sbjct: 473 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 532

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           TY +++    K+   +  I+    M+     P   TY  +I  +  E  A++
Sbjct: 533 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKE 584



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 237/473 (50%), Gaps = 9/473 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
            +FLE ++   +I    P    +L+R   +IG T+ A  V++ L+  G    +  +N  +
Sbjct: 134 FKFLESMVYRGDIPDIIPCT--SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 191

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           S   K  EI    ++   M       +V T+N ++  LC   KL++A+ +  R L+   +
Sbjct: 192 SGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY 248

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V+ + ++I   C+   +  A+KL  +M         P+ VT+N +ING CK GR++ A
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEM---RNKGSKPDVVTYNVLINGICKEGRLDEA 305

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            +    M   G   NV T+  ++      G   +A +L  +M+++G  P+ V +N  I++
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L  +G +  A+ +L  M      P+  +Y+ L  G C+   + +A +  + ++      D
Sbjct: 366 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 425

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +YN L+  LCK   +  A ++L+ +  +G  P +ITY T+IDG  K G  E A+++ +
Sbjct: 426 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 485

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M++   KP+++ Y+S+++GL ++  +D A       + +G+  +AITYN+++ G   + 
Sbjct: 486 EMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSR 545

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +   A    + M +      +  Y ILI  +   G  ++A +L+  +   G++
Sbjct: 546 QTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 201/395 (50%), Gaps = 7/395 (1%)

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+LE   K    M V  GD  +P+ +    +I GFC++G+ + A  +   + ++G   +V
Sbjct: 128 GELEDGFKFLESM-VYRGD--IPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LI GY + G  + AL++ D M    + P+ V YN+ +  L   G ++ A+ VL  
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            + K   PD  TY+IL +  C+   V QA KL +++  +    D  +YN+LIN +CK   
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L  A + L++M   G  P++IT+  ++   C  G    A ++  +M +    P++V +N 
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN LC+   L  A  +L+     G   ++++YN L++G+    K+  A      M + G
Sbjct: 362 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
              + V YN L+  LCK G    A E++  +   G  P  +TY T++   SK    E  I
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           +L D+M   G+ PD  TY++++S L  E   ++ +
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL      FR    M    V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLNEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 151/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G   E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  MI++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A  L   M+ +GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
                + + M    + PD +TYS+L  GLC+   +  A  L +++L++ +V +  ++  L
Sbjct: 188 NEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 127/228 (55%), Gaps = 1/228 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           Y +NIL++   K   +  A+ +  ++   GL P ++++ TL++GY K G++    ++   
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M+    +P++  Y+ +INGLCK++ +D A  L       GL+ + +T+ TLI+G+  NG+
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +  A  ++ +M +  ++ + + YN LI  LCK G  +QA++L+  MI+ G+ PD +TYTT
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           L+    K    E   E    M+   +  D+  Y A+IS L  E  + D
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A  +++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 252/547 (46%), Gaps = 42/547 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKL--KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           ++ +V+   +   ++ A D++  +  K  G S ++  +N  +  L +  E+ +   L+ E
Sbjct: 193 YNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHE 252

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G V +V T+  +I ALCK   +++A  +  +M+ +G  PN V +N +I+     G 
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQ 312

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            +    +FR+M   +   ++PN VT N  ++  CK G+ + A E   +M   G   N+ T
Sbjct: 313 WKETAGMFREM---TSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVT 369

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+ L+ GYA  G   + L L + M   G++ +  V+N  I      G ++  + + + M 
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++ + PD  TY I+     R G +  A    NQ++   +  +   Y+ LI   C   NL 
Sbjct: 430 EQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489

Query: 447 AAKQLLSSMIVRGLI------------------------------------PDIITYGTL 470
            AK+L+S M+ RG+                                     PD+IT+ +L
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSL 549

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           IDGY   G IE A  V + M     +P++V YN++I+G C++  +D    L       G+
Sbjct: 550 IDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGV 609

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
               ITY  +++G F +G+   A  M  EM   G  ++     I++  LC+  C  +A  
Sbjct: 610 KPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIA 669

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + K +    +  +     T++    K    EE  EL D +  +G+ P+  TY  +I  LL
Sbjct: 670 MFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLL 729

Query: 650 GEKSAED 656
            E S E+
Sbjct: 730 KEGSVEE 736



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 221/453 (48%), Gaps = 7/453 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK--SGIWPNVVCFNMIINE 260
           L   M   G   +  ++N V+  LC++ + + AL L + M+K   G  PNVV +N +I+ 
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G++  A  LF +M       V+P+ VT+  II+  CK   ++ AE +   MI  G 
Sbjct: 237 LFREGEVSKACNLFHEM---MQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY  +I GY+  G  +E   +  EM  +GLMPN V  NS +  L   G  + A  
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
               M  K   P+  TYS+L  G    GC      L N +    +V D   +NI+I+   
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K   +     + + M  +G+IPD  TYG +I  + + G +  A+  +  M  +  KP  +
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGI 473

Query: 501 IYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           +Y+S+I G C   +L  AK L+    S+ I   + + +N++IN     G++ EA  +F  
Sbjct: 474 VYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDF 533

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           + ++G   + + +N LI+     G  ++A  ++  MI  GI PD V+Y TL+  + +N  
Sbjct: 534 VIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGR 593

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            ++ + L  +M+  GV P   TY  I+  L  +
Sbjct: 594 IDDGLILFGEMLSKGVKPTTITYGIILHGLFND 626



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 154/617 (24%), Positives = 242/617 (39%), Gaps = 119/617 (19%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE-----------IGR 199
           A  RA     +TE A+ +  +L  +   V   + N F + L +              +  
Sbjct: 42  ATERARAGTLSTEDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVAL 101

Query: 200 FWKLYKEMVSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKS------------- 245
           F ++ +E       +  V T+N+++   C+  +     +L+ R LK+             
Sbjct: 102 FNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILL 161

Query: 246 -----------------------GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
                                  G+ P+ + +N ++   C+    + AL L   M   SG
Sbjct: 162 KCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSG 221

Query: 283 ----------------------------------DSVLPNSVTHNCIINGFCKLGRVEFA 308
                                               V+P+ VT+  II+  CK   ++ A
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           E +   MI  G   N  TY  +I GY+  G  +E   +  EM  +GLMPN V  NS +  
Sbjct: 282 ELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSS 341

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN---------- 418
           L   G  + A      M  K   P+  TYS+L  G    GC      L N          
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVAD 401

Query: 419 -------------------------QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
                                    Q+ E+ ++ DA +Y I+I    +   LA A    +
Sbjct: 402 QRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFN 461

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ-VYENMKKVEKKPNLVIYNSIINGLCKD 512
            MI  GL P+ I Y +LI G+C  GN+  A + V E M +   +PN+V +NSIIN LCK+
Sbjct: 462 QMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKE 521

Query: 513 ASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             +  A  +      IG   D IT+N+LI+GY + GKI +AF +   M + GI  + V Y
Sbjct: 522 GRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSY 581

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N LI+  C+ G       L   M+  G+ P  +TY  ++     +       ++  +M+ 
Sbjct: 582 NTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641

Query: 632 SGVSPDNQTYNAIISPL 648
           SG + D  T   I+  L
Sbjct: 642 SGTTMDISTCGIILGGL 658



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 210/458 (45%), Gaps = 5/458 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G ++ A +    +  KGH  ++  ++  L              L+  M   G V +   F
Sbjct: 346 GKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVF 405

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+VI A  K   ++E + ++ +M + G+ P+   + ++I    ++G L  A+  F +M  
Sbjct: 406 NIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIA 465

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID-CNVRTYATLIDGYARGG 338
           M    + P  + ++ +I GFC  G +  A+E+   M+  GI   N+  + ++I+   + G
Sbjct: 466 MG---LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEG 522

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
              EA  + D ++  G  P+ + +NS I      G +E A  VL  MI   I PD  +Y+
Sbjct: 523 RVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYN 582

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G CRNG +     L  ++L + +     +Y I+++ L        AK++   MI  
Sbjct: 583 TLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G   DI T G ++ G C+    + A+ +++ +  +  K N+ I N++I+ + K    + A
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           K L  +    GL+ +A TY  +I      G + EA  MFS M   G A +    N +I  
Sbjct: 703 KELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRV 762

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
           L + G   +A   M  +    I  +  T + L+  FS+
Sbjct: 763 LLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSR 800



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 198/410 (48%), Gaps = 5/410 (1%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A   VF+ ++ A  + G  +    +  +++ +G       +   ++   ++  +      
Sbjct: 400 ADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDK 459

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI-WPNVVCFNMIINEAC 262
           + +M++ G       ++ +I   C    L +A  L   M+  GI  PN+V FN IIN  C
Sbjct: 460 FNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLC 519

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +  A  +F  + +  G+   P+ +T N +I+G+  +G++E A  +  AMI AGI+ 
Sbjct: 520 KEGRVVEAHDIFDFV-IHIGER--PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEP 576

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V +Y TLIDGY R G  ++ L L  EM+ +G+ P  + Y   +H LF +G   GA  + 
Sbjct: 577 DVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +MI+     D  T  I+  GLCRN C  +A  +  ++   ++  +    N +I+ + K 
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                AK+L  S+   GL+P+  TYG +I    K G++E A  ++  M+K    P+  + 
Sbjct: 697 RKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 503 NSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           N II  L +   +  A   + +   +   L+A T + L+  +   GK  E
Sbjct: 757 NYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWE 806



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 122/269 (45%), Gaps = 3/269 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++L+     +G  E A+ V+  +   G    + ++N  +    +   I     L+ EM
Sbjct: 545 TFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEM 604

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S G      T+ ++++ L  + +   A  + + M++SG   ++    +I+   C+    
Sbjct: 605 LSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ +F+K+G M+   V  N    N +I+   K+ + E A+E+  ++   G+  N  TY
Sbjct: 665 DEAIAMFKKLGAMN---VKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTY 721

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I    + GS EEA  +   M K G  P++ + N  I  L  +G++  A   +  +  
Sbjct: 722 GVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDG 781

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           K I  +  T S+L     R G   +  KL
Sbjct: 782 KRISLEASTVSLLMALFSREGKYWEDVKL 810



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 27/164 (16%)

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
           P+L +  ++ N +C++          +A  R+ L    TYN L++      +    FA+F
Sbjct: 95  PSLAV--ALFNRICRE----------EARPRVALPTVCTYNILMDCCCRTRRPTVGFALF 142

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV--MILH-----GIIPDYVTYTTL 609
                 G+ ++ +  +IL+       C   A+    V  ++LH     G+ PD ++Y T+
Sbjct: 143 GRFLKTGLKMDVIVASILLK------CLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTV 196

Query: 610 VTRFSKNCSPEEVIELHDDMVL--SGVSPDNQTYNAIISPLLGE 651
           V    ++   +  ++L   MV    G SP+  TYN +I  L  E
Sbjct: 197 VKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 220/444 (49%), Gaps = 6/444 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV+ +  +I+A  +   +E A++    ML  GI  N   F  II+     G+ E A   F
Sbjct: 51  NVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWF 110

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            K      ++++P  + +N I+  +C+ G +E  E +   M + G   N+  Y T+++G+
Sbjct: 111 EKF---KAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 167

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPD 393
           A     E+ L     +   GL P    Y   +      G++  AL +L +M DKH + P+
Sbjct: 168 AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPN 226

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y+++  G  R G    AFK+   ++   +  D   YNIL++  CK+  +  A  +L 
Sbjct: 227 KMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLE 286

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
           ++    L+P I TY +++DGY KGGNI+ A++V++ +K    +P +V YNS+++GL K  
Sbjct: 287 NIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKAR 346

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            ++ A+ +L      G++ +  +Y  L  GY   G + +AF MF  M+   +A++ V Y 
Sbjct: 347 QMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYG 406

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L+   CK G  Q+A E+ + +   G+  + +TY T++  +++     +  +L +DM   
Sbjct: 407 ALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKH 466

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
           G   D   Y + I         E+
Sbjct: 467 GFHLDTICYTSFIKACFRSGDTEE 490



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 251/505 (49%), Gaps = 8/505 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL--NEIGRFWKLYK 205
           ++ +L+ A  +    EGA    +++  +G  ++   + + +S       NE    W  ++
Sbjct: 54  IYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHW--FE 111

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           +  +   V     +N ++ A C+   +E   +L  +M + G   N+  +  ++N   ++ 
Sbjct: 112 KFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIR 171

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D E  L  F ++       + P + T+ CI+  F K G +  A +I   M K G+  N  
Sbjct: 172 DEEKCLSFFHRLKACG---LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKM 228

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            YA ++DGYARGG    A ++ ++MV  GL P+ V+YN  +H     G ++ AL VL ++
Sbjct: 229 IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENI 288

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + P   TY+ +  G  + G +++A ++ +++    +     SYN L++ L K+  +
Sbjct: 289 EANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 348

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A+ +L+ M+  G++P+  +Y  L +GY + G++E A  +++ MKK     ++V Y ++
Sbjct: 349 ENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGAL 408

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           +   CK  ++  A  + Q     GL  + ITY T+++G+   G++++A  + ++M+  G 
Sbjct: 409 LKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGF 468

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
            ++ + Y   I    + G  ++  E + VM    +  +  TYTTL+  +     P++ I 
Sbjct: 469 HLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAIS 528

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLL 649
            ++    SG+  D+   N ++S L+
Sbjct: 529 CYEQAKASGLQLDSALSNCLLSGLI 553



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 190/398 (47%), Gaps = 4/398 (1%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P +  + ++++   + GD   A   F     M    + PN   +  +I+ + +   +E A
Sbjct: 15  PVLREYGLLVDFYARHGDKVAARATFE---AMRASHIKPNVHIYTSLIHAYAEARDMEGA 71

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
                 M+  GI  N   + ++I GYA  G++E A    ++     L+P  +VYNS +  
Sbjct: 72  VACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQA 131

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G++E    +L+ M ++    +   Y+ +  G       ++     +++    +   
Sbjct: 132 YCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPT 191

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           A +Y  ++    K+ N+A A  +L  M   G+ P+ + Y  ++DGY +GG+   A +V+E
Sbjct: 192 AATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWE 251

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
           +M     KP++VIYN +++  CK   +D A  +L+  +   LL  I TY ++++GY   G
Sbjct: 252 DMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGG 311

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
            I +A  +F  ++  G+    V YN L++ L K    + AR ++  M+ +G++P+  +YT
Sbjct: 312 NIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYT 371

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            L   +++    E+   +   M    ++ D   Y A++
Sbjct: 372 ALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALL 409



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 175/370 (47%), Gaps = 3/370 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T A +  +V+  T+ G    A D+++++   G S +   +   +    +  +    +K++
Sbjct: 191 TAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVW 250

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           ++MVS G   ++  +N++++A CK  ++++AL +   +  + + P +  +  I++   + 
Sbjct: 251 EDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKG 310

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+++ AL++F ++       + P  V++N +++G  K  ++E A  +   M+  G+  N 
Sbjct: 311 GNIQKALEVFDRIKTAG---LRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNE 367

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R+Y  L +GYAR G  E+A  +   M K  L  + V Y + +      G ++ A  V   
Sbjct: 368 RSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQ 427

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           + D  +  +  TY  +  G  R G + +A  L N + +     D   Y   I    +S +
Sbjct: 428 ITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGD 487

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
                + L+ M  + L  +  TY TLI G+    + + A+  YE  K    + +  + N 
Sbjct: 488 TEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNC 547

Query: 505 IINGLCKDAS 514
           +++GL   AS
Sbjct: 548 LLSGLISCAS 557



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 139/347 (40%), Gaps = 57/347 (16%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           +VH      R D AL ++ N+ +   +  +E    +LD Y                  + 
Sbjct: 268 LVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGY-----------------VKG 310

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A +V  ++K  G    + ++N+ LS L K  ++     +  EM++ G V N  ++
Sbjct: 311 GNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSY 370

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
             +     +   +E+A  ++ RM K  +  ++V +  ++   C+ G ++ A ++F++   
Sbjct: 371 TALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQ--- 427

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                                              +  AG+  N  TY T++DG+AR G 
Sbjct: 428 -----------------------------------ITDAGLKHNRITYCTMLDGWARKGE 452

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A  L ++M K G   + + Y S I   F  GD E     L+ M +K +  +  TY+ 
Sbjct: 453 LSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTT 512

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL--CKSNN 444
           L  G        QA   + Q     +  D+   N L++ L  C S N
Sbjct: 513 LIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLISCASQN 559


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 234/472 (49%), Gaps = 10/472 (2%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI ++N  L  L K+    + + LYK+M   G   N  T N++I  LC   ++ E LS  
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             +++ G  P+VV +  +I   C    +  A +LF +M  +      PN VT+  +I G 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG---CWPNVVTYGTLIKGL 206

Query: 300 CKLGRVEFAEEIRYAMIKA----GIDC--NVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
           C+ G +  A ++   M+       I+C  N+ +Y  +ID   + G  +EA RL +EMV +
Sbjct: 207 CRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQ 266

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P+ V +++ I  L  EG V  A   L  M+ + I PD FT++ L +G C  G +  A
Sbjct: 267 GVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSA 326

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L   +  +    D  SY +LI   CK+ N+  A +L + M+  G  PD+ T+  L+ G
Sbjct: 327 KELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKG 386

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
               G +  A +++  +K      NL I +  ++GLCK+  L  A  L    +   + LD
Sbjct: 387 LFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLD 446

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
             ++N LI+G     K+  A+ +F ++   G+  + V Y I+IN  CK G    A  L +
Sbjct: 447 IESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQ 506

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
           +M  +G  P+ +TY+ L+  F KN   EEV++L   M+   VS     Y  +
Sbjct: 507 MMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 224/457 (49%), Gaps = 18/457 (3%)

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
           + ++ +FNL++ AL K     +  SLY +M  +G+ PN    N++IN  C V  +   L 
Sbjct: 88  MRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLS 147

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
                G+M     +P+ VT+  +I G C   R+  A  +   M K G   NV TY TLI 
Sbjct: 148 AMA--GIMR-RGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIK 204

Query: 333 GYARGGSSEEALRLCDEMVKR------GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           G  R G+   AL+L  EM+           PN   YN  I  L   G  + A  + ++M+
Sbjct: 205 GLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMV 264

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           D+ + PD  T+S L   LC+ G V +A K    ++   +V D +++  LI   C   +L 
Sbjct: 265 DQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLD 324

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
           +AK+L  SM  +G  PD+I+Y  LI GYCK  N+E A+++Y  M +V K P++  +  ++
Sbjct: 325 SAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLL 384

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFI-----NGKIAEAFAMFSEMRN 561
            GL     +  AK L    +      A+  N  I   F+     NG + EA  +F+E+++
Sbjct: 385 KGLFLAGKVGDAKKLFGVVKP----HAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKS 440

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             + ++   +N LI+ LCK    + A EL + +   G+ PD VTY  ++  F KN   + 
Sbjct: 441 YNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDN 500

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              L   M  +G +P+  TY+A++         E+ V
Sbjct: 501 ANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVV 537



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 178/383 (46%), Gaps = 46/383 (12%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMV--SCGYV----ENVNTFNLVIYALCKECKLEEAL 236
            +   +  L +   I    KL++EM+  +  Y      N+ ++N++I  LCK  K +EA 
Sbjct: 198 TYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAK 257

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            L+  M+  G+ P+VV F+ +I+  C+ G +  A K    M ++ G  ++P+  T   +I
Sbjct: 258 RLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETM-MLRG--IVPDLFTFTSLI 314

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            GFC +G ++ A+E+  +M   G + +V +Y  LI GY +  + EEA++L +EM++ G  
Sbjct: 315 EGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKW 374

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH-FTYSILTKGLCRNGCVKQAFK 415
           P+   +   +  LF  G V G    L  ++  H  P + +  S+   GLC+NGC+ +A +
Sbjct: 375 PDMKTFCVLLKGLFLAGKV-GDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAME 433

Query: 416 LHNQVL-----------------------------------EEHMVGDAYSYNILINYLC 440
           L N++                                    +E +  D  +Y I+IN  C
Sbjct: 434 LFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFC 493

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           K+  +  A  L   M   G  P+++TY  L+ G+ K   +E  V++   M + +      
Sbjct: 494 KNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAAS 553

Query: 501 IYNSIINGLCKDASLDAAKSLLQ 523
           IY  + + + KD        +LQ
Sbjct: 554 IYTIVEDMVSKDEKCREWLDILQ 576


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 219/425 (51%), Gaps = 4/425 (0%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           GY  +  T    I   C + ++ +AL  + +++  G   + V +  +IN  C+VG+ + A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+L R+     G  V P+ V +N II+G CK   V  A ++    +   I  +V TY  L
Sbjct: 318 LELLRRN---DGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNAL 374

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I G+   G  ++A+ L ++M  + ++P+   ++  +     +G+++ A  VL+ M+ + I
Sbjct: 375 ISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSI 434

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  TYS L  G C    V +A  + N +    +  +  SYNI+IN  CK   +  A +
Sbjct: 435 KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMK 494

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M  + + PD+ITY +LIDG CK G I  A+++ + M    ++P+++ YNSI++ LC
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   +D A +LL   +  G+  D  TY  L+ G   +GK+ +A  +F ++   G  ++  
Sbjct: 555 KKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVY 614

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y ++I   C  G + +A  L+  M  +G IPD  TY  ++    +    +   +L  +M
Sbjct: 615 AYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674

Query: 630 VLSGV 634
           ++ G+
Sbjct: 675 IMRGL 679



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 189/361 (52%), Gaps = 1/361 (0%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+++T    I GFC  G++  A      +I  G   +  +Y TLI+G  + G ++ AL L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
                 + + P+ V+YN+ I  +  +  V  A  + S+ + K I PD FTY+ L  G C 
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G +K A  L N++  ++++ D Y+++IL++  CK  N+  AK +L+ M+ + + PD++T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y +L+DGYC    +  A  ++  M       N+  YN +ING CK   +D A  L +   
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
              +  D ITY++LI+G   +G+I+ A  +  EM   G   + + YN +++ LCK     
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L+  +   GI PD  TYT LV    ++   E+  ++ +D+++ G + D   Y  +I
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 646 S 646
            
Sbjct: 621 Q 621



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 212/417 (50%), Gaps = 5/417 (1%)

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           ++LK+G  P+ +     I   C  G +  AL    K+  M       + V++  +ING C
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHL---DQVSYGTLINGLC 309

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K+G  + A E+        +  +V  Y T+IDG  +     +A  L  E V + + P+  
Sbjct: 310 KVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVF 369

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN+ I      G ++ A+ + + M  K+I PD +T+SIL  G C++G +K+A  +   +
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM 429

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           +++ +  D  +Y+ L++  C  N +  A+ + ++M  RG+  ++ +Y  +I+G+CK   +
Sbjct: 430 MKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV 489

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           + A+++++ M   +  P+++ Y+S+I+GLCK   +  A  L+      G   D ITYN++
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           ++       + +A  + ++++  GI  +   Y IL+  LC+ G  + AR++ + +++ G 
Sbjct: 550 LDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGY 609

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             D   YT ++  F      +E + L   M  +G  PD +TY  II  L  EK   D
Sbjct: 610 NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF-EKDEND 665



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 227/510 (44%), Gaps = 54/510 (10%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           + +  F++L ++  +   +E    F  ++ +L K       LSL  +M   GI  N +  
Sbjct: 93  DAVSLFYRLLRQNPTPPDIE----FGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNC 148

Query: 255 NMIINEACQVGDLEFAL---------------------------------------KLF- 274
           N++IN  CQ+G + FA                                        +LF 
Sbjct: 149 NILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFL 208

Query: 275 ------RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA-EEIRYAMIKAGIDCNVRTY 327
                 R   V+    +L     H   I   C L   E + E     ++K G + +  T 
Sbjct: 209 KDFLQSRLFNVLHSFKILIEY--HKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITL 266

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T I G+   G   +AL   D+++  G   + V Y + I+ L   G+ + AL +L     
Sbjct: 267 TTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDG 326

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K + PD   Y+ +  G+C++  V  AF L+++ + + +  D ++YN LI+  C    L  
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L + M  + +IPD+ T+  L+DG+CK GNI+ A  V   M K   KP++V Y+S+++
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G C    ++ A+S+       G+   + +YN +ING+     + EA  +F EM +  I  
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           + + Y+ LI+ LCK G    A EL+  M   G  PD +TY +++    K    ++ I L 
Sbjct: 507 DVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLL 566

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             +   G+ PD  TY  ++  L      ED
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLED 596



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 199/387 (51%), Gaps = 3/387 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    ++G T+ A +++++   K     +  +N  +  + K   +   + LY E V
Sbjct: 301 YGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKV 360

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S     +V T+N +I   C   KL++A+ L+ +M    I P+V  F+++++  C+ G+++
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIK 420

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +   + +M   S+ P+ VT++ +++G+C +  V  AE I   M   G+  NV++Y 
Sbjct: 421 EAKNV---LAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYN 477

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I+G+ +    +EA++L  EM  + + P+ + Y+S I  L   G +  AL ++ +M  +
Sbjct: 478 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYR 537

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  TY+ +   LC+   V +A  L  ++  + +  D  +Y IL+  LC+S  L  A
Sbjct: 538 GQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDA 597

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           +++   ++V+G   D+  Y  +I G+C  G  + A+ +   M++    P+   Y  II  
Sbjct: 598 RKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILS 657

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAIT 535
           L +    D A+ LL+     GLL A+T
Sbjct: 658 LFEKDENDMAEKLLREMIMRGLLVALT 684



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 129/275 (46%), Gaps = 9/275 (3%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     + +L+     +     A  +   +  +G + ++ ++N  ++   K+  +    K
Sbjct: 435 KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMK 494

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+KEM       +V T++ +I  LCK  ++  AL L   M   G  P+++ +N I++  C
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++ A+ L  K   + G  + P+  T+  ++ G C+ G++E A ++   ++  G + 
Sbjct: 555 KKHHVDKAITLLTK---LKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNL 611

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V  Y  +I G+   G  +EAL L  +M + G +P+   Y   I  LF + + + A  +L
Sbjct: 612 DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLL 671

Query: 383 SDMIDKHI---CPDHFTYSILTKGLCRNGCVKQAF 414
            +MI + +     D    SIL +   R  C + A 
Sbjct: 672 REMIMRGLLVALTDDLVASILVR---RTWCARLAL 703


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 242/497 (48%), Gaps = 17/497 (3%)

Query: 145 TP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP  + F+++V    ++G  + A D++  +   G    + ++N+ +    +  +I R   
Sbjct: 53  TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI-RSAS 111

Query: 203 LYKEMV--SCGYV--ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           L  E +  S G++   ++ +FN +     K   L+E       MLK    PNVV ++  I
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWI 170

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +  C+ G+L+ ALK F  M     D++ PN VT  C+I+G+CK G +E A  +   M + 
Sbjct: 171 DTFCKSGELQLALKSFHSM---KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRV 227

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            +  NV TY  LIDG+ + G  + A  +   MV+  + PN++VY + I   F  GD + A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
           +  L+ M+++ +  D   Y ++  GLC NG +K+A ++   + +  +V D   +  ++N 
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
             KS  + AA  +   +I RG  PD++   T+IDG  K G +  A+  +       +K N
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKAN 402

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
            V+Y  +I+ LCK+      + L       GL+ D   Y + I G    G + +AF + +
Sbjct: 403 DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            M   G+ ++ + Y  LI  L   G   +AR++   M+  GI PD   +  L+  + K  
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522

Query: 618 SPEEVIELHDDMVLSGV 634
           +     +L  DM   G+
Sbjct: 523 NMAAASDLLLDMQRRGL 539



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 227/478 (47%), Gaps = 38/478 (7%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K    +VS GY  + ++FN V+  +CK  +++ A  + + M + G  P+V+ +N +I+  
Sbjct: 42  KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING----------------------- 298
           C+ GD+  A  +   +    G    P+ V+ N + NG                       
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP 161

Query: 299 -----------FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
                      FCK G ++ A +  ++M +  +  NV T+  LIDGY + G  E A+ L 
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM +  +  N V Y + I     +G+++ A  + S M++  + P+   Y+ +  G  + 
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G    A K   ++L + M  D  +Y ++I+ LC +  L  A +++  M    L+PD++ +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            T+++ Y K G ++ AV +Y  + +   +P++V  +++I+G+ K+  L  A       + 
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
               + + Y  LI+     G   E   +FS++   G+  +K  Y   I  LCK G    A
Sbjct: 402 ----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            +L   M+  G++ D + YTTL+   +      E  ++ D+M+ SG+SPD+  ++ +I
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 196/415 (47%), Gaps = 53/415 (12%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFN----MIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           + EAL    R+ KS   P+    N     +IN  C +  L+F   L  +          P
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSR-------GYTP 54

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  + N +++  CKLG+V+FAE+I ++M + G +                          
Sbjct: 55  HRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCE-------------------------- 88

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH--IC-PDHFTYSILTKGL 404
                    P+ + YNS I      GD+  A  VL  +   H  IC PD  +++ L  G 
Sbjct: 89  ---------PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF 139

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            +   + + F ++  V+ +    +  +Y+  I+  CKS  L  A +   SM    L P++
Sbjct: 140 SKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNV 198

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ- 523
           +T+  LIDGYCK G++E AV +Y+ M++V    N+V Y ++I+G CK   +  A+ +   
Sbjct: 199 VTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSR 258

Query: 524 -ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
               R+   +++ Y T+I+G+F  G    A    ++M N G+ ++   Y ++I+ LC  G
Sbjct: 259 MVEDRVEP-NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
             ++A E+++ M    ++PD V +TT++  + K+   +  + ++  ++  G  PD
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 214/449 (47%), Gaps = 40/449 (8%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYE-ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           G++ SA+ V     LE L  S+  ICK     F++L    +++   +  + V   + +K 
Sbjct: 105 GDIRSASLV-----LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKC 158

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
            S ++  ++ ++    K  E+    K +  M       NV TF  +I   CK   LE A+
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           SLY  M +  +  NVV +  +I+  C+ G+++ A +++ +M     D V PNS+ +  II
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM---VEDRVEPNSLVYTTII 275

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           +GF + G  + A +    M+  G+  ++  Y  +I G    G  +EA  + ++M K  L+
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG-------- 408
           P+ V++ + ++  F  G ++ A+ +   +I++   PD    S +  G+ +NG        
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395

Query: 409 -CVKQA---------------------FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            C+++A                      +L +++ E  +V D + Y   I  LCK  NL 
Sbjct: 396 FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L + M+  GL+ D++ Y TLI G    G +  A QV++ M      P+  +++ +I
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAIT 535
               K+ ++ AA  LL   QR GL+ A++
Sbjct: 516 RAYEKEGNMAAASDLLLDMQRRGLVTAVS 544



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 150/308 (48%), Gaps = 5/308 (1%)

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           +L+    +V RG  P+   +NS + ++   G V+ A  ++  M      PD  +Y+ L  
Sbjct: 40  SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMV---GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           G CRNG ++ A  +   +   H      D  S+N L N   K   L      +  M+ + 
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KC 158

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P+++TY T ID +CK G ++ A++ + +MK+    PN+V +  +I+G CK   L+ A 
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           SL +  +R+ + L+ +TY  LI+G+   G++  A  M+S M    +  N + Y  +I+  
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            + G    A + +  M+  G+  D   Y  +++    N   +E  E+ +DM  S + PD 
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338

Query: 639 QTYNAIIS 646
             +  +++
Sbjct: 339 VIFTTMMN 346



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 38/314 (12%)

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V  AL  LS +      PD FT +     L  + C   + K    ++         S+N 
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +++++CK   +  A+ ++ SM   G  PD+I+Y +LIDG+C+ G+I  A  V E+++   
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 495 K---KPNLVIYNSIINGL----------------------------------CKDASLDA 517
               KP++V +NS+ NG                                   CK   L  
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A     + +R  L  + +T+  LI+GY   G +  A +++ EMR V +++N V Y  LI+
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             CK G  Q+A E+   M+   + P+ + YTT++  F +    +  ++    M+  G+  
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301

Query: 637 DNQTYNAIISPLLG 650
           D   Y  IIS L G
Sbjct: 302 DITAYGVIISGLCG 315


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 163/655 (24%), Positives = 279/655 (42%), Gaps = 106/655 (16%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
            L  S V  +    +  P LA  F+T + E+  F H++++  A++ +L  WR       L
Sbjct: 60  DLNTSRVVEIFYNLKNEPNLAWSFFTQLKESG-FQHNVDTYAALIRVLCRWRLERKLQSL 118

Query: 117 MGNLMSANSVSPLEF-LEGLLDSYEICKATPA---------VFDALVRACTQIGATEGAY 166
           +  ++ +   S L F +  L D                   V D LV+A  ++G  + A 
Sbjct: 119 LSEIVGSKE-SVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAI 177

Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           D + + K +G          F+ H++                SC ++ N          L
Sbjct: 178 DALFQTKRRG----------FVPHIM----------------SCNFLMN---------RL 202

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
            +  K++ A+++Y  + + G+ PN   + + I   C+ G+ E A+ +FR+M       V 
Sbjct: 203 IEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREM---EEAGVN 259

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN+VT +  I G C   R +   E   A+  A    +   Y  +I G+      +EA  +
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDV 319

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI----------------DKHI 390
             +MV  G+ P+  +Y + IH     G++  A+ + +DM+                D  I
Sbjct: 320 FIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGI 379

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             D   Y+I+   LC+ G V++A +L N++    M  D   Y  LI   C    L  AK 
Sbjct: 380 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 439

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   M  RG+ PDI+TY  L+ G+ + G  + A+++ + +     KPN   +N II GLC
Sbjct: 440 MFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC 499

Query: 511 KDASLDAAKSLL------------------------------------QASQRIGLLDA- 533
               +  A++ L                                    Q   R+  LD  
Sbjct: 500 MAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVE 559

Query: 534 ---ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
              I Y  LI  +  +G +  A  +F  +   GI  + + Y ++IN  C+  C ++AR++
Sbjct: 560 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDI 619

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              M   GI PD +TYT ++   SK  + ++ I L+D+M+  G+ PD  TY A++
Sbjct: 620 FNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 156/304 (51%), Gaps = 15/304 (4%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +  L KL ++    +L  EM       +V  +  +I   C + KL +A +++  M 
Sbjct: 386 YNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMK 445

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           + GI P++V +N+++    + G  + AL+L   +G      + PNS THN II G C  G
Sbjct: 446 ERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGT---QGLKPNSATHNRIIEGLCMAG 502

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM------- 356
           +V+ AE    A +    D  +  Y+ ++DGY +   + +A  L   + K+G++       
Sbjct: 503 KVKEAE----AFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDV 558

Query: 357 -PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN ++Y   I     +GD++ A  V   ++++ I PD  TY+++  G CR  C+++A  
Sbjct: 559 EPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARD 618

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           + N + E  +  D  +Y ++++   K+NNL  A  L   MI RGL PDI+TY  L+ G C
Sbjct: 619 IFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKC 678

Query: 476 KGGN 479
             G+
Sbjct: 679 NFGS 682



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 200/457 (43%), Gaps = 36/457 (7%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK---ECKLEEALSLYYRMLKSGIWPNV 251
           NE    W  + ++   G+  NV+T+  +I  LC+   E KL+  LS        G   +V
Sbjct: 75  NEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIV-----GSKESV 129

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + F+        +  L   L+           SVL   +  + ++  + ++G  + A + 
Sbjct: 130 LGFD--------ITALFDVLREGGGEVEGEHSSVL--ILVLDMLVKAYVRVGMFDEAIDA 179

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
            +   + G   ++ +   L++     G  + A+ +   + + GL PN+  Y   I  L  
Sbjct: 180 LFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCR 239

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +G+ E A+ V  +M +  + P+  T S   +GLC +      ++    +   +   D ++
Sbjct: 240 KGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFA 299

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  +I   C    L  A+ +   M+  G+ PD   YG LI  YCK GN+  AV ++ +M 
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMV 359

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
               K NLV               D  K    +      LD + YN +++     GK+ E
Sbjct: 360 SNGIKTNLV---------------DQFKEFRDSGI---FLDEVLYNIVVDALCKLGKVEE 401

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  + +EM+   ++++ V Y  LI   C  G    A+ + + M   GI PD VTY  LV 
Sbjct: 402 AVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVG 461

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            FS+N   +E +EL D +   G+ P++ T+N II  L
Sbjct: 462 GFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 57/122 (46%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  L+ A  + G  + A  V   L  +G +  +  +   ++   ++N +     ++ +M
Sbjct: 564 MYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDM 623

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +V T+ +V+    K   L++A++LY  M+  G+ P++V +  ++   C  G  
Sbjct: 624 KERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSR 683

Query: 268 EF 269
            F
Sbjct: 684 HF 685


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 222/438 (50%), Gaps = 5/438 (1%)

Query: 216 VNTFNLVIYALCKECKLE-EALSLYYRMLKS-GIWPNVVCFNMIINEACQVGDLEFALKL 273
             T  ++I+  C +  L  EA++ ++RM         V  FN ++N   Q GD  +A K 
Sbjct: 99  TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF 158

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           +  +   +     PN +T+N II   CKLG+++ A +    M     + +V TY+TL++G
Sbjct: 159 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 218

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             +    +EA+ L DEM   G +PN V +N  I  L   GD+  A  ++ +M  K   P+
Sbjct: 219 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPN 278

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+ L  GLC  G + +A  L  +++    V +  +Y  +IN L K         +L 
Sbjct: 279 EVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILM 338

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
           SM  RG   +   Y +LI G  K G  E AV++++ M +   KPN+V+Y + I+GLC+D 
Sbjct: 339 SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 398

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
             D A+ +LQ     G L +A TY++L+ G+F  G   +A  ++ EM +  +  N V  +
Sbjct: 399 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCS 458

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           +L+N LC+ G  ++A  +   M+  G+ PD V Y++++       S ++ ++L  +M   
Sbjct: 459 VLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 518

Query: 633 --GVSPDNQTYNAIISPL 648
                PD  TYN + + L
Sbjct: 519 EPKSRPDVVTYNILFNAL 536



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 262/558 (46%), Gaps = 37/558 (6%)

Query: 74  PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE 133
           P  A+ F+  +  +     +++S  +++++++    F  A     ++  ANS     F  
Sbjct: 116 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKG---FQP 172

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            LL            ++ +++A  ++G  + A D  +++ +K  +  +  ++  ++ L K
Sbjct: 173 NLL-----------TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 221

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
              +     L  EM + G + N  TFN++I AL K   L  A  L   M   G  PN V 
Sbjct: 222 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 281

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +N +I+  C  G L+ AL L  K   M     +PN VT+  IING  K  R E    I  
Sbjct: 282 YNTLIHGLCLKGKLDKALSLLEK---MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILM 338

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
           +M + G   N   Y++LI G  + G SE A+RL  EM ++G  PN VVY + I  L  + 
Sbjct: 339 SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 398

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             + A  +L +M+ K   P+ FTYS L KG  + G  ++A  +  +++ + M  +    +
Sbjct: 399 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCS 458

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           +L+N LC+S  L  A  + + M+  GL PD++ Y ++I G C  G+++  ++++  M+  
Sbjct: 459 VLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 518

Query: 494 EKK--PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           E K  P++V YN + N LC+  +L  A  LL +    G   D++T N  +          
Sbjct: 519 EPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPP 578

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +   +F               + L+  L K      A  +++ M+L  + P+  T++ ++
Sbjct: 579 QDGRLF--------------LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVI 624

Query: 611 TRFSKNCSPEEVIELHDD 628
            R    C P+ + E  D+
Sbjct: 625 QR---TCKPKRIRETIDE 639



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 248/530 (46%), Gaps = 31/530 (5%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKL 203
           T  +F  + +AC +      A +   ++    H   ++ ++N+ L+ +++  +    +K 
Sbjct: 99  TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF 158

Query: 204 YKEMV---SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           Y  +    S G+  N+ T+NL+I ALCK  +++ A+  +  M      P+V  ++ ++N 
Sbjct: 159 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 218

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+   ++ A+ L  +M     +  LPN VT N +I+   K G +  A ++   M   G 
Sbjct: 219 LCKERRVDEAVFLLDEM---QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC 275

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY TLI G    G  ++AL L ++MV    +PN V Y + I+ L  +   E  + 
Sbjct: 276 VPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 335

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L  M ++    + + YS L  GL + G  + A +L  ++ E+    +   Y   I+ LC
Sbjct: 336 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 395

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +      A+ +L  M+ +G +P+  TY +L+ G+ K G+ + A+ V++ M   + + N+V
Sbjct: 396 RDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVV 455

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
             + ++NGLC+   L  A ++       GL  D + Y+++I G    G + +   +F EM
Sbjct: 456 CCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515

Query: 560 R--NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT------------ 605
           +        + V YNIL N LC+     +A +L+  M+  G  PD +T            
Sbjct: 516 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERI 575

Query: 606 ---------YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
                       LV R  K       + + ++M+L  + P+  T++ +I 
Sbjct: 576 NPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQ 625



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 4/247 (1%)

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI---VRGLIPDIITYGTLID 472
            H    + H      S+N ++N + +  + + A +    +     +G  P+++TY  +I 
Sbjct: 123 FHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIK 182

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
             CK G I+ AV  +  M      P++  Y++++NGLCK+  +D A  LL   Q  G L 
Sbjct: 183 ALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLP 242

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +T+N LI+    NG ++ A  +   M   G   N+V YN LI+ LC  G   +A  L+
Sbjct: 243 NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 302

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + M+    +P+ VTY T++    K    E+ + +   M   G   +   Y+++IS L  E
Sbjct: 303 EKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKE 362

Query: 652 KSAEDQV 658
             +E+ V
Sbjct: 363 GKSENAV 369



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 4/255 (1%)

Query: 406 RNGCVKQAFKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           + G    AFK +  V   +  G   +  +YN++I  LCK   +  A      M ++   P
Sbjct: 148 QEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNP 207

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D+ TY TL++G CK   ++ AV + + M+     PN V +N +I+ L K+  L  A  L+
Sbjct: 208 DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 267

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                 G + + +TYNTLI+G  + GK+ +A ++  +M +     N+V Y  +IN L K 
Sbjct: 268 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ 327

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
              +    ++  M   G   +   Y++L++   K    E  + L  +M   G  P+   Y
Sbjct: 328 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVY 387

Query: 642 NAIISPLLGEKSAED 656
            A I  L  ++  ++
Sbjct: 388 GAFIDGLCRDEKPDE 402


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 222/438 (50%), Gaps = 5/438 (1%)

Query: 216 VNTFNLVIYALCKECKLE-EALSLYYRMLKS-GIWPNVVCFNMIINEACQVGDLEFALKL 273
             T  ++I+  C +  L  EA++ ++RM         V  FN ++N   Q GD  +A K 
Sbjct: 123 TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF 182

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
           +  +   +     PN +T+N II   CKLG+++ A +    M     + +V TY+TL++G
Sbjct: 183 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 242

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             +    +EA+ L DEM   G +PN V +N  I  L   GD+  A  ++ +M  K   P+
Sbjct: 243 LCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPN 302

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             TY+ L  GLC  G + +A  L  +++    V +  +Y  +IN L K         +L 
Sbjct: 303 EVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILM 362

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
           SM  RG   +   Y +LI G  K G  E AV++++ M +   KPN+V+Y + I+GLC+D 
Sbjct: 363 SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 422

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
             D A+ +LQ     G L +A TY++L+ G+F  G   +A  ++ EM +  +  N V  +
Sbjct: 423 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCS 482

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           +L+N LC+ G  ++A  +   M+  G+ PD V Y++++       S ++ ++L  +M   
Sbjct: 483 VLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 542

Query: 633 --GVSPDNQTYNAIISPL 648
                PD  TYN + + L
Sbjct: 543 EPKSRPDVVTYNILFNAL 560



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 262/558 (46%), Gaps = 37/558 (6%)

Query: 74  PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLE 133
           P  A+ F+  +  +     +++S  +++++++    F  A     ++  ANS     F  
Sbjct: 140 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKG---FQP 196

Query: 134 GLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK 193
            LL            ++ +++A  ++G  + A D  +++ +K  +  +  ++  ++ L K
Sbjct: 197 NLL-----------TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCK 245

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
              +     L  EM + G + N  TFN++I AL K   L  A  L   M   G  PN V 
Sbjct: 246 ERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVT 305

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +N +I+  C  G L+ AL L  K   M     +PN VT+  IING  K  R E    I  
Sbjct: 306 YNTLIHGLCLKGKLDKALSLLEK---MVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILM 362

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
           +M + G   N   Y++LI G  + G SE A+RL  EM ++G  PN VVY + I  L  + 
Sbjct: 363 SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDE 422

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             + A  +L +M+ K   P+ FTYS L KG  + G  ++A  +  +++ + M  +    +
Sbjct: 423 KPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCS 482

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           +L+N LC+S  L  A  + + M+  GL PD++ Y ++I G C  G+++  ++++  M+  
Sbjct: 483 VLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 542

Query: 494 EKK--PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           E K  P++V YN + N LC+  +L  A  LL +    G   D++T N  +          
Sbjct: 543 EPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPP 602

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +   +F               + L+  L K      A  +++ M+L  + P+  T++ ++
Sbjct: 603 QDGRLF--------------LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVI 648

Query: 611 TRFSKNCSPEEVIELHDD 628
            R    C P+ + E  D+
Sbjct: 649 QR---TCKPKRIRETIDE 663



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 248/530 (46%), Gaps = 31/530 (5%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKL 203
           T  +F  + +AC +      A +   ++    H   ++ ++N+ L+ +++  +    +K 
Sbjct: 123 TETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF 182

Query: 204 YKEMV---SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           Y  +    S G+  N+ T+NL+I ALCK  +++ A+  +  M      P+V  ++ ++N 
Sbjct: 183 YLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNG 242

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+   ++ A+ L  +M     +  LPN VT N +I+   K G +  A ++   M   G 
Sbjct: 243 LCKERRVDEAVFLLDEM---QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC 299

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY TLI G    G  ++AL L ++MV    +PN V Y + I+ L  +   E  + 
Sbjct: 300 VPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVH 359

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L  M ++    + + YS L  GL + G  + A +L  ++ E+    +   Y   I+ LC
Sbjct: 360 ILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLC 419

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +      A+ +L  M+ +G +P+  TY +L+ G+ K G+ + A+ V++ M   + + N+V
Sbjct: 420 RDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVV 479

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
             + ++NGLC+   L  A ++       GL  D + Y+++I G    G + +   +F EM
Sbjct: 480 CCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539

Query: 560 R--NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT------------ 605
           +        + V YNIL N LC+     +A +L+  M+  G  PD +T            
Sbjct: 540 QCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERI 599

Query: 606 ---------YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
                       LV R  K       + + ++M+L  + P+  T++ +I 
Sbjct: 600 NPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQ 649



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 4/247 (1%)

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI---VRGLIPDIITYGTLID 472
            H    + H      S+N ++N + +  + + A +    +     +G  P+++TY  +I 
Sbjct: 147 FHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIK 206

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
             CK G I+ AV  +  M      P++  Y++++NGLCK+  +D A  LL   Q  G L 
Sbjct: 207 ALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLP 266

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           + +T+N LI+    NG ++ A  +   M   G   N+V YN LI+ LC  G   +A  L+
Sbjct: 267 NPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 326

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + M+    +P+ VTY T++    K    E+ + +   M   G   +   Y+++IS L  E
Sbjct: 327 EKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKE 386

Query: 652 KSAEDQV 658
             +E+ V
Sbjct: 387 GKSENAV 393



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 4/255 (1%)

Query: 406 RNGCVKQAFKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           + G    AFK +  V   +  G   +  +YN++I  LCK   +  A      M ++   P
Sbjct: 172 QEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNP 231

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D+ TY TL++G CK   ++ AV + + M+     PN V +N +I+ L K+  L  A  L+
Sbjct: 232 DVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLV 291

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                 G + + +TYNTLI+G  + GK+ +A ++  +M +     N+V Y  +IN L K 
Sbjct: 292 DNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQ 351

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
              +    ++  M   G   +   Y++L++   K    E  + L  +M   G  P+   Y
Sbjct: 352 RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVY 411

Query: 642 NAIISPLLGEKSAED 656
            A I  L  ++  ++
Sbjct: 412 GAFIDGLCRDEKPDE 426


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/536 (24%), Positives = 259/536 (48%), Gaps = 33/536 (6%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A+   + +++ AC + G  E A  V  ++   G  +S+ A  + ++     NE+G+    
Sbjct: 308 ASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDF 367

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M   G   +   F+++I   CK  ++E+A+ +Y RM   GI P+ V  + +I    +
Sbjct: 368 FNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLK 427

Query: 264 VGDLEFALKLFR---------------------KMG----------VMSGDSVLPNSVTH 292
               E AL++F                      K G          +M    + PN V +
Sbjct: 428 AESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFY 487

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++   C++  ++ A  I   M++ G+  N  TY+ LIDG+ +    + A  + ++M+ 
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIA 547

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI-DKHICPDHFTYSILTKGLCRNGCVK 411
                N V+YN+ I+ L   G    A  +L ++I +K       +Y+ +  G  + G   
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTD 607

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A + + ++ E  +  +  ++  LIN  CKSN +  A +++  M  + L  D+  YG LI
Sbjct: 608 SAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALI 667

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG+CK  +++ A  ++  + ++   PN+ +YN++I+G      +DAA  L +     G+ 
Sbjct: 668 DGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGIS 727

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TY T+I+G   +G +  A  ++SE+  +GI  +++ Y +L+N L K G + +A ++
Sbjct: 728 CDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKM 787

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           ++ M      P+ + Y+T++    +  +  E   +HD+M+  G+  D+  +N ++S
Sbjct: 788 LEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVS 843



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 160/616 (25%), Positives = 272/616 (44%), Gaps = 42/616 (6%)

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNW-RRFDDALLLMGNLMSAN-SVSP 128
           R  P  AL++  WV          +    ++H+L +     D A  L+   +S+N ++ P
Sbjct: 90  RNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSPHTHDRASNLLVMFVSSNPTLIP 149

Query: 129 LEFLEGLLDSYEIC--KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
              +  L+DS +    + +   F+ L+ A  +    + A D    +  +     +   NN
Sbjct: 150 SAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNN 209

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            LS LV+ N I    ++Y +MV  G   +  T  L++ A  +E K EEA+ ++ R++  G
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRG 269

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P+ + F++ +  AC++ DL  AL L R+M    G  V  +  T+  +I    K G +E
Sbjct: 270 AEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGG--VPASQETYTSVIVACVKEGNME 327

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A +++  M+  GI  +V    +LI G+  G    +AL   + M + GL P+ V+++  I
Sbjct: 328 EAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMI 387

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG----------------------- 403
            W     ++E A+ +   M    I P       + +G                       
Sbjct: 388 EWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIA 447

Query: 404 -----------LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
                      LC+ G V  A      +  + +  +   YN ++   C+  N+  A+ + 
Sbjct: 448 HGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIF 507

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           S M+ +GL P+  TY  LIDG+ K  + + A +V   M     + N VIYN+IINGLCK 
Sbjct: 508 SEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKV 567

Query: 513 ASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
                AK +LQ    ++   +   +YN++I+G+F  G    A   + EM   GI+ N V 
Sbjct: 568 GQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVT 627

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +  LIN  CK      A E++  M    +  D   Y  L+  F K    +    L  +++
Sbjct: 628 FTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELL 687

Query: 631 LSGVSPDNQTYNAIIS 646
             G+ P+   YN +IS
Sbjct: 688 ELGLMPNVSVYNNLIS 703



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 253/510 (49%), Gaps = 19/510 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           +F   V+A  ++     A D++++++ KG    S   + + +   VK   +    K+  E
Sbjct: 276 LFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDE 335

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G   +V     +I   C   +L +AL  + RM + G+ P+ V F+++I   C+  +
Sbjct: 336 MVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNME 395

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR----YAMIKAGIDC 322
           +E A++++++M  +    + P+SV  + +I G  K    E A EI        I  G  C
Sbjct: 396 MEKAVEIYKRMKSVG---IAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMC 452

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI--HWLFAEGDVEGALF 380
           N + +  L     + G  + A      M  +G+ PN V YN+ +  H      D+  ++F
Sbjct: 453 N-KIFLLL----CKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIF 507

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
             S+M++K + P++FTYSIL  G  +N   + A+++ NQ++  +   +   YN +IN LC
Sbjct: 508 --SEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLC 565

Query: 441 KSNNLAAAKQLLSSMIVRGLIP-DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           K    + AK++L ++I          +Y ++IDG+ K G+ + AV+ Y  M +    PN+
Sbjct: 566 KVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNV 625

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           V + S+ING CK   +D A  ++   +   L LD   Y  LI+G+     +  A+ +FSE
Sbjct: 626 VTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSE 685

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           +  +G+  N   YN LI+     G    A +L K M+  GI  D  TYTT++    K+ +
Sbjct: 686 LLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
                +L+ +++  G+ PD   Y  +++ L
Sbjct: 746 LILASDLYSELLALGIVPDEILYVVLVNGL 775



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 201/436 (46%), Gaps = 39/436 (8%)

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           SP   LE   DS+E   A   + + +     + G  + A   ++ ++ KG   ++  +NN
Sbjct: 430 SPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNN 489

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    ++  +     ++ EM+  G   N  T++++I    K    + A  +  +M+ S 
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASN 549

Query: 247 IWPNVVCFNMIINEACQVG------------------------------------DLEFA 270
              N V +N IIN  C+VG                                    D + A
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSA 609

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           ++ +R+M   S + + PN VT   +INGFCK  R++ A E+ + M    +  +V  Y  L
Sbjct: 610 VEAYREM---SENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGAL 666

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDG+ +    + A  L  E+++ GLMPN  VYN+ I      G ++ A+ +   M++  I
Sbjct: 667 IDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGI 726

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             D FTY+ +  GL ++G +  A  L++++L   +V D   Y +L+N L K      A +
Sbjct: 727 SCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASK 786

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L  M  +   P+++ Y T+I G+ + GN+  A +V++ M +     +  I+N +++G  
Sbjct: 787 MLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRV 846

Query: 511 KDASLDAAKSLLQASQ 526
           +     A  S L + +
Sbjct: 847 EKPPAAAKISSLASPE 862



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 167/318 (52%), Gaps = 4/318 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           +A   +++ ++    ++G T  A +++Q L K K +S+   ++N+ +    K  +     
Sbjct: 551 EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAV 610

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + Y+EM   G   NV TF  +I   CK  +++ AL + + M    +  +V  +  +I+  
Sbjct: 611 EAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGF 670

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+  D++ A  LF ++  +    ++PN   +N +I+GF  LG+++ A ++   M+  GI 
Sbjct: 671 CKKNDMKTAYTLFSELLELG---LMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGIS 727

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
           C++ TY T+IDG  + G+   A  L  E++  G++P+ ++Y   ++ L  +G    A  +
Sbjct: 728 CDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKM 787

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M  K   P+   YS +  G  R G + +AF++H+++LE+ +V D   +N+L++   +
Sbjct: 788 LEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVE 847

Query: 442 SNNLAAAKQLLSSMIVRG 459
               AA    L+S  +R 
Sbjct: 848 KPPAAAKISSLASPEMRS 865



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 181/397 (45%), Gaps = 4/397 (1%)

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            FN ++N   +   +++A+  F    +M   +V+P     N +++   +   ++ A+EI 
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCF---NLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIY 227

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M+  G+  +  T   L+    R    EEA+++   ++ RG  P+ ++++  +      
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKM 287

Query: 373 GDVEGALFVLSDMIDKHICP-DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            D+  AL +L +M +K   P    TY+ +     + G +++A K+ ++++   +     +
Sbjct: 288 KDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIA 347

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
              LI   C  N L  A    + M   GL PD + +  +I+ +CK   +E AV++Y+ MK
Sbjct: 348 ATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMK 407

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
            V   P+ V+ + +I G  K  S +AA  +   S    +      N +       GK+  
Sbjct: 408 SVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDA 467

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A +    M N GI  N V YN ++   C+      AR +   M+  G+ P+  TY+ L+ 
Sbjct: 468 ATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILID 527

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            F KN   +   E+ + M+ S    +   YN II+ L
Sbjct: 528 GFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGL 564



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 120/262 (45%), Gaps = 2/262 (0%)

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            ++ L     RN  +  A    N +++ ++V      N +++ L +SN +  AK++ + M
Sbjct: 171 AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           ++ G+  D +T   L+    +    E A++++  +     +P+ ++++  +   CK   L
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290

Query: 516 DAAKSLLQASQRIGLLDAI--TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
             A  LL+  +  G + A   TY ++I      G + EA  +  EM   GI ++ +    
Sbjct: 291 VMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATS 350

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI   C      +A +    M   G+ PD V ++ ++  F KN   E+ +E++  M   G
Sbjct: 351 LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVG 410

Query: 634 VSPDNQTYNAIISPLLGEKSAE 655
           ++P +   + +I   L  +S E
Sbjct: 411 IAPSSVLVHKMIQGCLKAESPE 432


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 235/476 (49%), Gaps = 8/476 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     ++  ++ A    G    A  ++ ++ + G +  ++ +N+ +  L  L  +    
Sbjct: 208 CVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAA 267

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L   M++ G + +V T+  ++  LC+  + +EA ++  R+ +     NVV  N +I   
Sbjct: 268 RLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGC 323

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G L  A +L+  MG        P+  T++ +++G CKLGR   A  +   M + G  
Sbjct: 324 LTEGKLARATELYEMMG---SKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA 380

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+ TY+TL+  + R G  ++A  + D+M+ +G   N+  YN  I+ L  +G ++ A  +
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRL 440

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           + +M  +   PD  TY+ +   LC N  +++A  +   ++EE +V +  +YN LI+ L +
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +       +L S M++ G   D+I+Y  LI   CK GN++ ++ + E M     KPN   
Sbjct: 501 NGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFS 560

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN +IN LCK   +  A  L +     GL  D +TYNTLING    G    A  +  ++ 
Sbjct: 561 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 620

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           N  +  + V YNILI++ CK      A  L+   I  GI+P+  T+  +V  F + 
Sbjct: 621 NENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 239/503 (47%), Gaps = 8/503 (1%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   F    RA  ++G    A  +++ +   G       +   +  LV    +     L 
Sbjct: 176 TTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLL 235

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            EM+  G   +VNTFN ++  LC   ++ EA  L  RM+  G  P+VV +  ++   C+ 
Sbjct: 236 DEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRT 295

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
              + A  +  ++  +       N V  N +I G    G++  A E+   M   G   +V
Sbjct: 296 RQADEACAMLGRLPEV-------NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDV 348

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY+ L+ G  + G    A+R+ DEM ++G  PN V Y++ +H     G  + A  +L  
Sbjct: 349 HTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQ 408

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+ K    +   Y+ +   LC++G + QA +L  ++  +    D  +YN +I +LC ++ 
Sbjct: 409 MLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDL 468

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ +  ++I  G++ + ITY TLI    + G  +  +++   M     + +++ YN 
Sbjct: 469 MEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNG 528

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I  LCK+ ++D + +LL+     G+  +  +YN LIN     GK+ +A  +  EM N G
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V YN LIN LCK G    A  L++ +    + PD VTY  L++   K    ++  
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648

Query: 624 ELHDDMVLSGVSPDNQTYNAIIS 646
            L D  +  G+ P+ +T+  ++ 
Sbjct: 649 MLLDKAISGGIVPNERTWGMMVQ 671



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 229/472 (48%), Gaps = 8/472 (1%)

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S S  ++N  LS L + +       LY+ M+         TF +   ALC+  +  +AL+
Sbjct: 139 SPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALA 198

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L   M + G  P+ V +  +I+     G +  A  L  +M +M   +   +  T N ++ 
Sbjct: 199 LLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA---DVNTFNDLVL 255

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G C LGRV  A  +   M+  G   +V TY  L+ G  R   ++EA      M+ R    
Sbjct: 256 GLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC----AMLGRLPEV 311

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V+ N+ I     EG +  A  +   M  K   PD  TYSIL  GLC+ G    A ++ 
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++ E+    +  +Y+ L++  C++     A+ +L  M+ +G   +   Y  +I   CK 
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKD 431

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
           G ++ A ++ + MK    KP++  YN++I  LC +  ++ A+ + +     G++ + ITY
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTLI+    NG+  E   + SEM   G  ++ + YN LI  LCK G   ++  L++ M+ 
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            GI P+  +Y  L+    K     + +EL  +M+  G++PD  TYN +I+ L
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 197/424 (46%), Gaps = 9/424 (2%)

Query: 234 EALSLYYRMLKS-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
            AL L  +M +   + P+   +N++++   +      AL L+R+M     D V P + T 
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRM---LRDRVPPTTFTF 180

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
                  C+LGR   A  +   M + G   +   Y T+I      G   EA  L DEM+ 
Sbjct: 181 GVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL 240

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G   +   +N  +  L   G V  A  ++  M+ +   P   TY  L +GLCR     +
Sbjct: 241 MGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADE 300

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A  +  ++ E ++V      N +I        LA A +L   M  +G  PD+ TY  L+ 
Sbjct: 301 ACAMLGRLPEVNVV----MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMH 356

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G CK G    AV++ + M++    PN+V Y+++++  C++   D A+++L      G  +
Sbjct: 357 GLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSM 416

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           ++  YN +I     +GK+ +A  +  EM++ G   +   YN +I  LC     ++A  + 
Sbjct: 417 NSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIF 476

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + +I  G++ + +TY TL+    +N   +E + L  +M+L G   D  +YN +I  L  E
Sbjct: 477 RNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKE 536

Query: 652 KSAE 655
            + +
Sbjct: 537 GNVD 540



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 192/394 (48%), Gaps = 18/394 (4%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT------------PAV--F 149
           L   R+ D+A  ++G L   N V     + G L   ++ +AT            P V  +
Sbjct: 292 LCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTY 351

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
             L+    ++G    A  ++ +++ KG + +I  ++  L    +         +  +M++
Sbjct: 352 SILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLA 411

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G+  N   +N +IYALCK+ KL++A  L   M   G  P++  +N +I   C    +E 
Sbjct: 412 KGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEE 471

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A  +FR +     + V+ N +T+N +I+   + GR +    +   M+  G   +V +Y  
Sbjct: 472 AEHIFRNL---IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNG 528

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    + G+ + ++ L +EMV +G+ PNN  YN  I+ L   G V  AL +  +M+++ 
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 588

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  TY+ L  GLC+ G    A  L  ++  E++  D  +YNILI++ CK   L  A 
Sbjct: 589 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAA 648

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGG-NIEG 482
            LL   I  G++P+  T+G ++  + +   N+EG
Sbjct: 649 MLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVY-------------------ENMKKVEK----------------KP 497
            Y + G +  A++ Y                   E++ K++                   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++   K+  +  A+S+  A  +  L  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/627 (23%), Positives = 300/627 (47%), Gaps = 64/627 (10%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF---DDALLLMGNLMSANSVSPL 129
           +P LA+E +  +       HS  +      L+  +RR    D  L ++G L+  N + P 
Sbjct: 152 APALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLK-NGLGPD 210

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           +F      SY           +L+    + G  + A+ +  ++  +G    I   N+ + 
Sbjct: 211 DF------SY-----------SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIK 253

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+ E+ +   + ++MV  G   ++ T++L+I  LCK   +++A  +  +M+++G  P
Sbjct: 254 ELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRP 313

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N + +N +I+     G    ++++F++M   S   V+P     N  I+   K GR   A+
Sbjct: 314 NSITYNSLIHGYSISGMWNESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAK 370

Query: 310 EIRYAMIKAGIDCNVRTYAT--------------------------------------LI 331
            I  +M+  G   ++ +Y+T                                      LI
Sbjct: 371 CIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILI 430

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           + YAR G  ++A+ + ++M  +G++P+ V + + I  L   G ++ AL   + M+D  + 
Sbjct: 431 NAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 490

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAAAKQ 450
           P    Y  L +G C +G + +A +L ++++ + +      Y + +IN LCK   +A  K 
Sbjct: 491 PSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKD 550

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           ++  M+  G  P+++T+ +L++GYC  GN+E A  + + M  +  +PN  IY ++++G C
Sbjct: 551 IMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYC 610

Query: 511 KDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K+  +D A ++ +     G+   ++ Y+ +++G F   +   A  MF EM   G  V+  
Sbjct: 611 KNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIH 670

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            Y +++  LC+  C  +A  L++ +    +  D +T+  +++   K    +E  EL D +
Sbjct: 671 TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAI 730

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
              G+ P+ QTY+ +I+ L+ E+S E+
Sbjct: 731 STYGLVPNIQTYSMMITNLIKEESYEE 757



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 190/406 (46%), Gaps = 5/406 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  + G  + A  + + ++ KG       +   +S L ++  +      +  M
Sbjct: 425 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 484

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVGD 266
           V  G   +   +  +I   C   +L +A  L   M+   I P  V  F+ IIN  C+ G 
Sbjct: 485 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 544

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +    K    M V +G    PN VT N ++ G+C +G +E A  +  AM   GI+ N   
Sbjct: 545 VAEG-KDIMDMMVQTGQR--PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 601

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY + G  ++AL +  +M+ +G+ P +V+Y+  +H LF       A  +  +MI
Sbjct: 602 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 661

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +        TY ++  GLCRN C  +A  L  ++   ++  D  ++NI+I+ + K     
Sbjct: 662 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 721

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK+L  ++   GL+P+I TY  +I    K  + E A  ++ +++K     +  + N I+
Sbjct: 722 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 781

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
             L   A +  A + L       L L+A T + L + +   GK  E
Sbjct: 782 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYRE 827



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 148/361 (40%), Gaps = 55/361 (15%)

Query: 109 RFDDALLLMGNLMSANSVSPLE-----FLEGLLDSYEICKA-------------TPAV-- 148
           R DDAL    N M    V P E      ++G  +  E+ KA              P V  
Sbjct: 473 RLDDALHKF-NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 531

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F +++    + G      D++  +   G   ++  +N+ +     +  +   + L   M 
Sbjct: 532 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 591

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           S G   N   +  ++   CK  ++++AL+++  ML  G+ P  V +++I++   Q     
Sbjct: 592 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 651

Query: 269 FALKLFRKMGVMSGDSVLPNS---------------------------------VTHNCI 295
            A K+F +M + SG +V  ++                                 +T N +
Sbjct: 652 AAKKMFHEM-IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 710

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+   K+GR + A+E+  A+   G+  N++TY+ +I    +  S EEA  L   + K G 
Sbjct: 711 ISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGH 770

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
             ++ + N  +  L  + +V  A   LS + + ++  +  T S+L     R G  ++  K
Sbjct: 771 ASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIK 830

Query: 416 L 416
           L
Sbjct: 831 L 831



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 34/265 (12%)

Query: 91  SHSLESSCAIVHLLVNWR----RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           S  +E +C I   LV+      R DDAL +  +++                 ++  K T 
Sbjct: 592 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML-----------------HKGVKPTS 634

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            ++  ++    Q   T  A  +  ++   G +VSIH +   L  L + N       L ++
Sbjct: 635 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 694

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           + +     ++ TFN+VI A+ K  + +EA  L+  +   G+ PN+  ++M+I    +   
Sbjct: 695 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 754

Query: 267 LEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI--KAGID 321
            E A  LF    K G  S DS L N +           L + E A+   Y  I  +  + 
Sbjct: 755 YEEADNLFISVEKSGHAS-DSRLLNHIVRML-------LNKAEVAKASNYLSIIGENNLT 806

Query: 322 CNVRTYATLIDGYARGGSSEEALRL 346
               T + L   ++R G   E ++L
Sbjct: 807 LEASTISLLASLFSREGKYREHIKL 831


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   MI  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +MID  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   MI  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++++  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFI 545
           YE   +     +L  +N +++   K+  +  A+S+  A  +  L  ++ ++NTL+NGY  
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G + E F + + M+  G+  +   Y++LIN LCK      A EL   MI +G++P+ VT
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVT 243

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
           +TTL+    KN   +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 217/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  YK
Sbjct: 66  IYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN +++   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +++ +G  P+ + YN+ I  L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK G+++   ++ + M +    P +V
Sbjct: 363 VDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVV 417



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 147/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL+ GY R G  +E  RL   M  
Sbjct: 140 NILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  + ++M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L +    D  +YN LI  LCK  +L  A+ L+  M ++ L PD ITY TLID
Sbjct: 260 AMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +   G +     +  EM   G
Sbjct: 380 DNGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  R G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A +L + M+  GL+P+ +T+ 
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQR 527
           TLIDG+CK G ++ A+++Y+ +      P+L+ YN++I GLCK   L  A+ L+ + S +
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMK 305

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
               D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    A
Sbjct: 306 ELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F K    +   +L  +M   G  P
Sbjct: 366 EKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 156/295 (52%), Gaps = 7/295 (2%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ +      GD
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGD 186

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + S M    + PD +TYS+L  GLC+   + +A +L N++L+  +V +  ++  
Sbjct: 187 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTT 246

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK+  +  A ++   ++ +G  PD+ITY TLI G CK G+++ A  + + M   E
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKE 306

Query: 495 KKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
            KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSV 363

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +A  M   M +VG+  +   Y ++IN  CK G  +   +L+K M   G +P  VT
Sbjct: 364 DAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           + GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ ++ + G + + + YN LI  LCK G  +QAR+
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M +  + PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L++   +  +L    +L S+
Sbjct: 137 YFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A +++  M      PN V + ++I+G CK+  
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +     G   D ITYNTLI G    G + +A  +  EM    +  +K+ Y  
Sbjct: 257 VDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++   M+  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + PDN TY  II+
Sbjct: 377 LKPDNGTYTMIIN 389


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 212/418 (50%), Gaps = 4/418 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F  ++ ++ K       LSL  +M   GI P+V   N++IN  C +  L +A  +  K+ 
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 174

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +      P++ T N +I G C  G++  A  +    I  G   +V TY TL++G  + G
Sbjct: 175 KLGCQ---PDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVG 231

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           ++  A+RL   MV++   PN + YN+ I  L  +  V  A  + S+MI K I PD FTY+
Sbjct: 232 NTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYN 291

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L   LC     K    L N+++   ++ +   ++ +++ LCK   +A A  ++  MI R
Sbjct: 292 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 351

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD++TY  L+DG+C    ++ AV+V++ M      PN+  YN +ING C+   +D A
Sbjct: 352 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 411

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL+     GL+ D +TYNTLI+G    G++  A A+F EM   G   + V Y IL+++
Sbjct: 412 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 471

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           LCK     +A  L+K +    +  D + Y   +    +    E   +L  ++   G +
Sbjct: 472 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 199/391 (50%), Gaps = 4/391 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G    ++  N  ++    L  +G  + +  +++  G   +  TFN +I  LC E K+ EA
Sbjct: 142 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 201

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           L L+ + +  G  P+VV +  ++N  C+VG+   A++L R    M   +  PN + +N I
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRS---MVQKNCRPNVIAYNTI 258

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+  CK  +V  A  +   MI  GI  ++ TY +LI         +    L +EMV   +
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           MPN VV+++ +  L  EG +  A  V+  MI + + PD  TY+ L  G C    + +A K
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 378

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           + + ++ +  V +  SYNILIN  C+   +  A  LL  M ++GLI D +TY TLI G C
Sbjct: 379 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 438

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
             G ++ A+ ++  M    + P+LV Y  +++ LCK+  L  A  LL+A +   L  D +
Sbjct: 439 HVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADIL 498

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            YN  I+G    G++  A  +FS +   G A
Sbjct: 499 VYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 204/415 (49%), Gaps = 4/415 (0%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L++ALS + RML     P+ V F  ++    ++      L L  +M       + P+  T
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFG---IPPDVYT 149

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +IN FC L R+ +A  +   ++K G   +  T+ TLI G    G   EAL L D+ +
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G  P+ V Y + ++ L   G+   A+ +L  M+ K+  P+   Y+ +   LC++  V 
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +AF L ++++ + +  D ++YN LI+ LC          LL+ M+   ++P+++ + T++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D  CK G I  A  V + M K   +P++V Y ++++G C  + +D A  +       G +
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 532 DAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
             + +YN LINGY    ++ +A  +  +M   G+  + V YN LI+ LC  G  Q A  L
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 449

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              M+  G IPD VTY  L+    KN    E + L   +  S +  D   YN  I
Sbjct: 450 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 177/349 (50%), Gaps = 3/349 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F+ L+R     G    A  +  K   +G    +  +   ++ L K+       
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L + MV      NV  +N +I +LCK+ ++ EA +L+  M+  GI P++  +N +I+  
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C + + +    L  +   M    ++PN V  + +++  CK G +  A ++   MIK G++
Sbjct: 298 CNLCEWKHVTTLLNE---MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY  L+DG+      +EA+++ D MV +G +PN   YN  I+       ++ A+ +
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M  + +  D  TY+ L  GLC  G ++ A  L ++++    + D  +Y IL++YLCK
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +++LA A  LL ++    L  DI+ Y   IDG C+ G +E A  ++ N+
Sbjct: 475 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 177/358 (49%), Gaps = 3/358 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A+ V+ KL   G       +N  +  L    +IG    L+ + +  G+  +V T+  ++ 
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMN 225

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK      A+ L   M++    PNV+ +N II+  C+   +  A  LF +M +  G S
Sbjct: 226 GLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEM-ITKGIS 284

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
             P+  T+N +I+  C L   +    +   M+ + I  NV  ++T++D   + G    A 
Sbjct: 285 --PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 342

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            + D M+KRG+ P+ V Y + +       +++ A+ V   M+ K   P+  +Y+IL  G 
Sbjct: 343 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 402

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+   + +A  L  Q+  + ++ D  +YN LI+ LC    L  A  L   M+  G IPD+
Sbjct: 403 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 462

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +TY  L+D  CK  ++  A+ + + ++      ++++YN  I+G+C+   L+AA+ L 
Sbjct: 463 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 520



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 165/312 (52%), Gaps = 3/312 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    ++G T  A  +++ +  K    ++ A+N  +  L K  ++   + L+ EM+
Sbjct: 220 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   ++ T+N +I+ALC  C+ +   +L   M+ S I PNVV F+ +++  C+ G + 
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  +   + +M    V P+ VT+  +++G C    ++ A ++   M+  G   NVR+Y 
Sbjct: 340 IAHDV---VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 396

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LI+GY +    ++A+ L ++M  +GL+ + V YN+ IH L   G ++ A+ +  +M+  
Sbjct: 397 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 456

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  TY IL   LC+N  + +A  L   +   ++  D   YNI I+ +C++  L AA
Sbjct: 457 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 516

Query: 449 KQLLSSMIVRGL 460
           + L S++  +G 
Sbjct: 517 RDLFSNLSCQGF 528



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 1/243 (0%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A    N++L  H       +  L+  + K  + +    L + M   G+ PD+ T   
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI+ +C    +  A  V   + K+  +P+   +N++I GLC +  +  A  L   +   G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D +TY TL+NG    G  + A  +   M       N + YN +I+ LCK     +A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L   MI  GI PD  TY +L+      C  + V  L ++MV S + P+   ++ ++  L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 649 LGE 651
             E
Sbjct: 333 CKE 335


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/626 (23%), Positives = 300/626 (47%), Gaps = 63/626 (10%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF---DDALLLMGNLMSANSVSPL 129
           +P LA+E +  +       HS  +      L+  +RR    D  L ++G L+  N + P 
Sbjct: 152 APALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLK-NGLGPD 210

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           +F      SY           +L+    + G  + A+ +  ++  +G    I   N+ + 
Sbjct: 211 DF------SY-----------SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIK 253

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+ E+ +   + ++MV  G   ++ T++L+I  LCK   +++A  +  +M+++G  P
Sbjct: 254 ELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRP 313

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N + +N +I+     G    ++++F++M   S   V+P     N  I+   K GR   A+
Sbjct: 314 NSITYNSLIHGYSISGMWNESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAK 370

Query: 310 EIRYAMIKAGIDCNVRTYAT-------------------------------------LID 332
            I  +M+  G   ++ +Y+T                                     LI+
Sbjct: 371 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 430

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
            YAR G  ++A+ + ++M  +G++P+ V + + I  L   G ++ AL   + M+D  + P
Sbjct: 431 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 490

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAAAKQL 451
               Y  L +G C +G + +A +L ++++ + +      Y + +IN LCK   +A  K +
Sbjct: 491 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 550

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M+  G  P+++T+ +L++GYC  GN+E A  + + M  +  +PN  IY ++++G CK
Sbjct: 551 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 610

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  +D A ++ +     G+   ++ Y+ +++G F   +   A  MF EM   G  V+   
Sbjct: 611 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 670

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y +++  LC+  C  +A  L++ +    +  D +T+  +++   K    +E  EL D + 
Sbjct: 671 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 730

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G+ P+ QTY+ +I+ L+ E+S E+
Sbjct: 731 TYGLVPNIQTYSMMITNLIKEESYEE 756



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 190/406 (46%), Gaps = 5/406 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  + G  + A  + + ++ KG       +   +S L ++  +      +  M
Sbjct: 424 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 483

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVGD 266
           V  G   +   +  +I   C   +L +A  L   M+   I P  V  F+ IIN  C+ G 
Sbjct: 484 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 543

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +    K    M V +G    PN VT N ++ G+C +G +E A  +  AM   GI+ N   
Sbjct: 544 VAEG-KDIMDMMVQTGQR--PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 600

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY + G  ++AL +  +M+ +G+ P +V+Y+  +H LF       A  +  +MI
Sbjct: 601 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 660

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +        TY ++  GLCRN C  +A  L  ++   ++  D  ++NI+I+ + K     
Sbjct: 661 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 720

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK+L  ++   GL+P+I TY  +I    K  + E A  ++ +++K     +  + N I+
Sbjct: 721 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
             L   A +  A + L       L L+A T + L + +   GK  E
Sbjct: 781 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYRE 826



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/370 (21%), Positives = 151/370 (40%), Gaps = 55/370 (14%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLE-----FLEGLLDSYEICKA---------- 144
           ++  L    R DDAL    N M    V P E      ++G  +  E+ KA          
Sbjct: 463 VISSLCRIGRLDDALHKF-NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 521

Query: 145 ---TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
               P V  F +++    + G      D++  +   G   ++  +N+ +     +  +  
Sbjct: 522 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 581

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + L   M S G   N   +  ++   CK  ++++AL+++  ML  G+ P  V +++I++
Sbjct: 582 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILH 641

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNS------------------------------ 289
              Q      A K+F +M + SG +V  ++                              
Sbjct: 642 GLFQARRTTAAKKMFHEM-IESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 700

Query: 290 ---VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
              +T N +I+   K+GR + A+E+  A+   G+  N++TY+ +I    +  S EEA  L
Sbjct: 701 FDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 760

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              + K G   ++ + N  +  L  + +V  A   LS + + ++  +  T S+L     R
Sbjct: 761 FISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSR 820

Query: 407 NGCVKQAFKL 416
            G  ++  KL
Sbjct: 821 EGKYREHIKL 830



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 34/265 (12%)

Query: 91  SHSLESSCAIVHLLVNW----RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           S  +E +C I   LV+      R DDAL +  +++                 ++  K T 
Sbjct: 591 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML-----------------HKGVKPTS 633

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            ++  ++    Q   T  A  +  ++   G +VSIH +   L  L + N       L ++
Sbjct: 634 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 693

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           + +     ++ TFN+VI A+ K  + +EA  L+  +   G+ PN+  ++M+I    +   
Sbjct: 694 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 753

Query: 267 LEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI--KAGID 321
            E A  LF    K G  S DS L N +           L + E A+   Y  I  +  + 
Sbjct: 754 YEEADNLFISVEKSGHAS-DSRLLNHIVRML-------LNKAEVAKASNYLSIIGENNLT 805

Query: 322 CNVRTYATLIDGYARGGSSEEALRL 346
               T + L   ++R G   E ++L
Sbjct: 806 LEASTISLLASLFSREGKYREHIKL 830


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 180/726 (24%), Positives = 300/726 (41%), Gaps = 146/726 (20%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL 104
           ++  K L Q    L+ SLV  V+    + P   + F+ W G    + H+     A+V L+
Sbjct: 117 RKSQKFLRQFREKLSESLVIEVLRLIAR-PSAVISFFVWAGRQIGYKHTAPVYNALVDLI 175

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           V   R DD  +            P EFL+ + D  +  +      + LVR   + G+   
Sbjct: 176 V---RDDDEKV------------PEEFLQQIRDDDK--EVFGEFLNVLVRKHCRNGSFSI 218

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A + + +LK      S   +N  +   +K + +     +++EM       +  T     Y
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 225 ALCKECKLEEALSL-----------YYRMLKSGI---------------------WPNVV 252
           +LCK  K  EAL+L           +Y  L SG+                      PNVV
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338

Query: 253 C-----------------------------------FNMIINEACQVGDLEFALKLFRKM 277
                                               FN +++  C  GD  +A KL +KM
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 278 GVMSGDSVLPNSVTHNCIINGFC------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            V  G   +P  V +N +I   C          ++ AE+    M+ AG+  N    ++  
Sbjct: 399 -VKCGH--MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A  +  EM+ +G +P+   Y+  +++L     +E A  +  +M    + 
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
            D +TY+I+    C+ G ++QA K  N++ E     +  +Y  LI+   K+  ++ A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM---KKV-------------EK 495
             +M+  G +P+I+TY  LIDG+CK G +E A Q++E M   K V              +
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQ-------------------RIGLLDAI-- 534
           +PN+V Y ++++G CK   ++ A+ LL A                     ++G LD    
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 535 ---------------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                          TY++LI+ YF   +   A  + S+M     A N V Y  +I+ LC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A +LM++M   G  P+ VTYT ++  F      E  +EL + M   GV+P+  
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 640 TYNAII 645
           TY  +I
Sbjct: 816 TYRVLI 821



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 206/439 (46%), Gaps = 26/439 (5%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKE-----CKLEE-ALSLYYRMLKSGIWPNVVCF 254
           +KL K+MV CG++     +N++I ++C +     C L + A   Y  ML +G+  N +  
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           +      C  G  E A  + R+M    G   +P++ T++ ++N  C   ++E A  +   
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREM---IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G+  +V TY  ++D + + G  E+A +  +EM + G  PN V Y + IH       
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA----- 429
           V  A  +   M+ +   P+  TYS L  G C+ G V++A ++  ++     V D      
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628

Query: 430 -----------YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
                       +Y  L++  CKS+ +  A++LL +M + G  P+ I Y  LIDG CK G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD-AAKSLLQASQRIGLLDAITYN 537
            ++ A +V   M +      L  Y+S+I+   K    D A+K L +  +     + + Y 
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            +I+G    GK  EA+ +   M   G   N V Y  +I+     G  +   EL++ M   
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808

Query: 598 GIIPDYVTYTTLVTRFSKN 616
           G+ P+YVTY  L+    KN
Sbjct: 809 GVAPNYVTYRVLIDHCCKN 827



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 53/503 (10%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+ + +++K  G    ++ +   +    K   I +  K + EM   G   NV T+  +
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----- 277
           I+A  K  K+  A  L+  ML  G  PN+V ++ +I+  C+ G +E A ++F +M     
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619

Query: 278 --------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
                        +S  PN VT+  +++GFCK  RVE A ++  AM   G + N   Y  
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDG  + G  +EA  +  EM + G       Y+S I   F     + A  VLS M++  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P+   Y+ +  GLC+ G   +A+KL  Q++EE                          
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEE-------------------------- 772

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
                   +G  P+++TY  +IDG+   G IE  +++ E M      PN V Y  +I+  
Sbjct: 773 --------KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK+ +LD A +LL+  ++         Y  +I G+  N +  E+  +  E+     A   
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFL 882

Query: 569 VGYNILINFLCKFGCYQQA-RELMKVMILHGIIPDY-VTYTTLVTRFSKNCSPEEVIELH 626
             Y +LI+ L K    + A R L +V      + DY  TY +L+         E   +L 
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942

Query: 627 DDMVLSGVSPDNQTYNAIISPLL 649
            +M   GV P+ Q++ ++I  L 
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLF 965



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 9/322 (2%)

Query: 135 LLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD  S E C+    V+DAL+    ++G  + A +V  ++   G   +++ +++ +    
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K+       K+  +M+      NV  +  +I  LCK  K +EA  L   M + G  PNVV
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+    +G +E  L+L  +MG      V PN VT+  +I+  CK G ++ A  + 
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMG---SKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +     +   Y  +I+G+ +     E+L L DE+ +    P   VY   I  L   
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895

Query: 373 GDVEGALFVLSDM--IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             +E AL +L ++      +     TY+ L + LC    V+ AF+L +++ ++ ++ +  
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955

Query: 431 SYNILINYLCKSNNLAAAKQLL 452
           S+  LI  L +++ ++ A  LL
Sbjct: 956 SFCSLIKGLFRNSKISEALLLL 977



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 131/334 (39%), Gaps = 47/334 (14%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+  + R GS   AL     +      P+   YN  I        ++ A  +  +M   +
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  D FT       LC+ G  ++A  L   V  E+ V D   Y  LI+ LC+++    A 
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAM 322

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIING 508
             L+ M     +P+++TY TL+ G C      G  +   NM  +E   P+  I+NS+++ 
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 509 LCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGY-----FINGKIAE-AFAMFSEMRN 561
            C       A  LL+   + G +   + YN LI         +N  + + A   +SEM  
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+ +NK+  +     LC  G Y++A  +++ MI  G IP                    
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP-------------------- 481

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
                          D  TY+ +++ L      E
Sbjct: 482 ---------------DTSTYSKVLNYLCNASKME 500



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 39/258 (15%)

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           ++L +  CRNG    A +   ++ +        +YN LI    K++ L +A  +   M +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
             L  D  T        CK G    A+ + E    V   P+ V Y  +I+GLC+ +  + 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCEASLFEE 320

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A   L   +    L + +TY+TL+ G     ++     + + M   G   +   +N L++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C  G +  A +L+K M+  G +P YV Y                              
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVY------------------------------ 410

Query: 637 DNQTYNAIISPLLGEKSA 654
                N +I  + G+K +
Sbjct: 411 -----NILIGSICGDKDS 423


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 176/722 (24%), Positives = 306/722 (42%), Gaps = 139/722 (19%)

Query: 46  RKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
           +  K L Q    L+ SLV  V+    + P   + F+ W G    + H+     A+V L+V
Sbjct: 118 KSQKFLRQFREKLSESLVIEVLRLIER-PSAVISFFVWAGRQIGYKHTSPVYNALVDLIV 176

Query: 106 NWRRFDDALL---LMGNLMSANSVSPLEFLEGLLDSYEICKA------------------ 144
              R DD  +   L+  +   +     EFL  L+  Y  C++                  
Sbjct: 177 ---RDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKY--CRSGSFSIALEELGRLKDFRF 231

Query: 145 --TPAVFDALVRACTQIGATEGAYDV-----IQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
             + + ++ L++A  +    + A  V     +  L++ G ++  +A++        L ++
Sbjct: 232 RPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYS--------LCKV 283

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC---- 253
           G++ +    M +  +V +   +  +I  LC+    EEA+    RM  +   PNVV     
Sbjct: 284 GKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343

Query: 254 -------------------------------FNMIINEACQVGDLEFALKLFRKMGVMSG 282
                                          FN +++  C  GD  +A KL +KM V  G
Sbjct: 344 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM-VKCG 402

Query: 283 DSVLPNSVTHNCIINGFC------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
            +  P  V +N +I   C          +E AE+    M+  G+  N    ++       
Sbjct: 403 HT--PGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCS 460

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
            G  E+A  +  EM+ +G +P+   Y+  + +L     +E A  +  +M    +  D +T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYT 520

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+I+    C+ G ++QA K  N++ E     +  +Y  LI+   K+  ++ A +L  +M+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM---KKV--------------EKKPNL 499
             G +P+I+TY  LIDG+CK G +E A Q++E M   K V               ++PN+
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNV 640

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQ-------------------RIGLLDAI------ 534
           VIY ++++G CK   ++ A+ LL A                     ++G LD        
Sbjct: 641 VIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAE 700

Query: 535 -----------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
                      TY++LI+ YF   +   A  + S+M     A N V Y  +I+ LCK G 
Sbjct: 701 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 760

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A +LM++M   G  P+ VTYT ++  F +    E  +EL + M   GV+P+  TY  
Sbjct: 761 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRV 820

Query: 644 II 645
           +I
Sbjct: 821 LI 822



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 243/519 (46%), Gaps = 25/519 (4%)

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
           +  R     G  E A+ VI+++  +G       ++  L +L   +++   + L++EM   
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRG 512

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G V +V T+ +++ + CK   +E+A   +  M + G  PNVV +  +I+   +   + +A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA----GIDC---- 322
            +LF     M  +  LPN VT++ +I+G CK G++E A +I   M  +     +D     
Sbjct: 573 NELFE---TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQ 629

Query: 323 ---------NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
                    NV  Y  L+DG+ +    EEA +L D M   G  PN +VY++ I  L   G
Sbjct: 630 YDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 689

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A  V ++M +       +TYS L     +      A K+ +++LE     +   Y 
Sbjct: 690 KLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 749

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +I+ LCK      A +L+  M  +G  P+++TY  +IDG+ + G IE  +++ E M   
Sbjct: 750 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSK 809

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
              PN V Y  +I+  CK+ +LD A +LL+  ++      A  Y  +I G+  N +  E+
Sbjct: 810 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIES 867

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA-RELMKVMILHGIIPDYV-TYTTLV 610
             +  E+     A     Y +L++ L K    + A R L +V      + DY  TY +L+
Sbjct: 868 LGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 927

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
                    ++   L  +M   GV P+ QT+ ++I  L 
Sbjct: 928 ESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLF 966



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 154/322 (47%), Gaps = 9/322 (2%)

Query: 135 LLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD  S E C+    V+DAL+    ++G  + A +V  ++   G   +++ +++ +    
Sbjct: 662 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYF 721

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K+       K+  +M+      NV  +  +I  LCK  K +EA  L   M + G  PNVV
Sbjct: 722 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 781

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+   ++G +E  L+L  +MG      V PN VT+  +I+  CK G ++ A  + 
Sbjct: 782 TYTAMIDGFGRIGKIETCLELLERMG---SKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 838

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +     +   Y  +I+G+ +     E+L L DE+ +    P   +Y   +  L   
Sbjct: 839 EEMKQTHWPTHAAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKA 896

Query: 373 GDVEGALFVLSDM--IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             +E AL +L ++      +     TY+ L + LC    V +AF+L +++ ++ ++ +  
Sbjct: 897 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQ 956

Query: 431 SYNILINYLCKSNNLAAAKQLL 452
           ++  LI  L +++ ++ A  LL
Sbjct: 957 TFCSLIKGLFRNSKISEALLLL 978



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 10/283 (3%)

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G    AL  L  + D    P   TY+ L +   +  C+  A  +H ++   ++  D ++ 
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTL 273

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
                 LCK   +   ++ L+ M     +PD + Y  LI G C+    E A+     M+ 
Sbjct: 274 RCYAYSLCK---VGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAE 551
               PN+V Y++++ G      L   K +L      G   +   +N+L++ Y  +G  + 
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLC----KFGCY--QQARELMKVMILHGIIPDYVT 605
           A+ +  +M   G     V YNILI  +C       C+  + A +    M+  G++ + + 
Sbjct: 391 AYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKIN 450

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            ++           E+   +  +M+  G  PD  TY+ ++  L
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 106/272 (38%), Gaps = 15/272 (5%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           KH  P    Y+ L   + R+   K   +L  Q+ ++         N+L+   C+S + + 
Sbjct: 162 KHTSP---VYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSI 218

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A + L  +      P   TY  LI  + K   ++ A  V+  M     + +         
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAY 278

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            LCK      A +L++    +   D + Y  LI+G        EA    + MR      N
Sbjct: 279 SLCKVGKWREALTLMETENFVP--DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336

Query: 568 KVGYNILINFLCKFGCYQQA-----RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            V Y+ L   LC  GC  +      + ++ +M++ G  P    + +LV  +  +      
Sbjct: 337 VVTYSTL---LC--GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 391

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
            +L   MV  G +P    YN +I  + G+K +
Sbjct: 392 YKLLKKMVKCGHTPGYVVYNILIGSICGDKDS 423


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 267/539 (49%), Gaps = 9/539 (1%)

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDV 168
           +D  L +    + NS+ P + L+     +EI    P +  +++L+ A  +    + A   
Sbjct: 78  EDVALTVIKAYAKNSM-PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESF 136

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
               +  G S ++  +N  +    +  +  +  +L   M   G+  +V ++  +I +L K
Sbjct: 137 FLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAK 196

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
              + +AL L+  M + G+ P+V C+N++I+   + GD+  A +++ ++  + G SV PN
Sbjct: 197 NGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL--LKGPSVYPN 254

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             ++N +ING CK G+ + + EI + M K     ++ TY+TLI G    G+ + A R+  
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 314

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM + G+ P+ VVYN+ ++     G +E  L  L  +++K  C    +Y+IL +GL  N 
Sbjct: 315 EMAENGVSPDVVVYNTMLNGYLRAGRIEECL-ELWKVMEKEGCRTVVSYNILIRGLFENA 373

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITY 467
            V +A  +   + E+    D+ +Y +L++ LCK+  L  A  +L      RG + D   Y
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAY 432

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            ++I+G C+ G ++    V + M K   KPN  + N++ING  + + L+ A         
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492

Query: 528 IGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G    + TYNTLING     + +EA+A+  EM + G   N + Y++L+N LC+      
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           A  L    +  G  PD   +  ++     +   E+ ++L+ +M      P+  T+N ++
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 247/520 (47%), Gaps = 7/520 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           CK    V   +++A  +    + A D+ Q++ ++ G    I ++N+ L+ L++ N+    
Sbjct: 74  CKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 133

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
              +    + G   N+ T+N++I   C++ + ++A  L   M + G  P+V  +  +IN 
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-G 319
             + G +  ALKLF +M       V P+   +N +I+GF K G +  A EI   ++K   
Sbjct: 194 LAKNGYMSDALKLFDEM---PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N+ +Y  +I+G  + G  +E+  +   M K     +   Y++ IH L   G+++GA 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +M +  + PD   Y+ +  G  R G +++  +L  +V+E+       SYNILI  L
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVSYNILIRGL 369

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            ++  +  A  +   +  +    D +TYG L+ G CK G +  A+ + E  +      + 
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             Y+S+INGLC++  LD    +L    + G   +    N +ING+    K+ +A   F  
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G     V YN LIN L K   + +A  L+K M+  G  P+ +TY+ L+    +   
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +  + L    +  G  PD + +N II  L      ED +
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 249/564 (44%), Gaps = 63/564 (11%)

Query: 11  KSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILE-QMAPSLTNSLVNRVVSE 69
           K   P   A  V K +A  S  D       +++ QR  +I   Q      NSL+N ++  
Sbjct: 73  KCKCPEDVALTVIKAYAKNSMPDQA-----LDIFQRMHEIFGCQPGIRSYNSLLNALIES 127

Query: 70  FRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPL 129
            +     +   Y    E    S +L++   ++ +    ++FD A  L+ N M     SP 
Sbjct: 128 NKWDEAESFFLYF---ETMGLSPNLQTYNILIKISCRKKQFDKAKELL-NWMWEQGFSPD 183

Query: 130 EFLEGLL-----------DSYEICKATP--------AVFDALVRACTQIGATEGAYDVIQ 170
            F  G L           D+ ++    P        A ++ L+    + G    A ++ +
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 243

Query: 171 KLKVKGHSV--SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +L +KG SV  +I ++N  ++ L K  +    ++++  M      +++ T++ +I+ LC 
Sbjct: 244 RL-LKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 302

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----------- 277
              L+ A  +Y  M ++G+ P+VV +N ++N   + G +E  L+L++ M           
Sbjct: 303 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSY 362

Query: 278 -----GVMSGDSV---------LP------NSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
                G+     V         LP      +S+T+  +++G CK G +  A  I      
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
              D +   Y+++I+G  R G  +E   + D+M K G  PN  V N+ I+       +E 
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL    +M+ K   P   TY+ L  GL +     +A+ L  ++L +    +  +Y++L+N
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC+   L  A  L    + +G  PD+  +  +I G C  G +E A+Q+Y  MK+ +  P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602

Query: 498 NLVIYNSIINGLCKDASLDAAKSL 521
           NLV +N+++ G  K    + A  +
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKI 626



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 171/343 (49%), Gaps = 4/343 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+      G  +GA  V +++   G S  +  +N  L+  ++   I    +L+K M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G    V ++N++I  L +  K++EA+S++  + +     + + + ++++  C+ G L
Sbjct: 352 EKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +  +     GD    ++  ++ +ING C+ GR++    +   M K G   N    
Sbjct: 411 NKALSILEEAENGRGDL---DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I+G+ R    E+ALR    MV +G  P  V YN+ I+ L        A  ++ +M+ 
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH 527

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  TYS+L  GLC+   +  A  L  Q LE+    D   +NI+I+ LC S  +  
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           A QL S M  R  +P+++T+ TL++G+ K  + E A ++++++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 3/213 (1%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            ++ +I  LC+E +L+E   +  +M K G  PN    N +IN   +   LE AL+ F   
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF--- 487

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           G M      P  VT+N +ING  K  R   A  +   M+  G   N+ TY+ L++G  +G
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              + AL L  + +++G  P+  ++N  IH L + G VE AL + S+M  +   P+  T+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
           + L +G  +    ++A K+ + +L+     + Y
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 89/196 (45%), Gaps = 25/196 (12%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A+++  V   + +DAL   GN++S                   C  T   ++ L+   ++
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKG-----------------CFPTVVTYNTLINGLSK 511

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
                 AY +++++  KG   ++  ++  ++ L +  ++     L+ + +  G+  +V  
Sbjct: 512 AERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKM 571

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
            N++I+ LC   K+E+AL LY  M +    PN+V  N ++    +V D E A K++    
Sbjct: 572 HNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW---- 627

Query: 279 VMSGDSVLPNSVTHNC 294
               D +L +  + NC
Sbjct: 628 ----DHILQSWSSSNC 639


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 220/444 (49%), Gaps = 6/444 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV+ +  +I+A  +   +E A++    ML  GI  N   F  II+     G+ E A   F
Sbjct: 165 NVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWF 224

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            K      ++++P  + +N I+  +C+ G +E  E +   M + G   N+  Y T+++G+
Sbjct: 225 EKF---KAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 281

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPD 393
           A     E+ L     +   GL P    Y   +      G++  AL +L +M DKH + P+
Sbjct: 282 AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPN 340

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y+++  G  R G    AFK+   ++   +  D  +YNIL++  CK+  +  A  +L 
Sbjct: 341 KMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLE 400

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
           ++    L+P I TY +++DGY KGG+I+ A++V++ +K    +P +V YNS+++GL K  
Sbjct: 401 NIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKAR 460

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            ++ A+ +L      G++ +  +Y  L  GY   G + +AF MF  M+   +A++ V Y 
Sbjct: 461 QMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYG 520

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L+   CK G  Q+A E+ + +   G+  + +TY T++  +++     +  +L  DM   
Sbjct: 521 ALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKH 580

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
           G   D   Y + I         E+
Sbjct: 581 GFHLDTICYTSFIKACFRSGDTEE 604



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/592 (23%), Positives = 279/592 (47%), Gaps = 20/592 (3%)

Query: 71  RKSPKLALEFYTWVGEN---NRFSHSLESSCAIVHLLVN-WRRFDDALLLMGNLM----- 121
           RKS +   E Y    +     RF  ++E      H +VN ++  D  +L    L+     
Sbjct: 83  RKSRQKGEEEYGDCSDEPAAQRFRETMEIDAGNWHKIVNAFQVIDKPVLREYGLLVDFYA 142

Query: 122 -SANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
              + V+     E +  S+   K    ++ +L+ A  +    EGA    +++  +G  ++
Sbjct: 143 RHGDKVAARATFEAMRASH--IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLN 200

Query: 181 IHAWNNFLSHLVKL--NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
              + + +S       NE    W  +++  +   V     +N ++ A C+   +E   +L
Sbjct: 201 EAVFCSIISGYASAGNNEAAEHW--FEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEAL 258

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
             +M + G   N+  +  ++N   ++ D E  L  F ++       + P + T+ CI+  
Sbjct: 259 LAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG---LSPTAATYGCIVKL 315

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
           F K G +  A +I   M K G+  N   YA ++DGYARGG    A ++ ++MV  GL P+
Sbjct: 316 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 375

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V YN  +H     G ++ AL VL ++    + P   TY+ +  G  + G +++A ++ +
Sbjct: 376 IVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFD 435

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++    +     SYN L++ L K+  +  A+ +L  M+  G++P+  +Y  L +GY + G
Sbjct: 436 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAG 495

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
           ++E A  +++ MKK     ++V Y +++   CK  ++  A  + Q     GL  + ITY 
Sbjct: 496 DVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYC 555

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           T+++G+   G++++A  +  +M+  G  ++ + Y   I    + G  ++  E + VM   
Sbjct: 556 TMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREK 615

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            +  +  TYTTL+  +     P++ I  ++    SG+  D+   N ++S L+
Sbjct: 616 KLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLI 667



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 175/370 (47%), Gaps = 3/370 (0%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T A +  +V+  T+ G    A D+++++   G S +   +   +    +  +    +K++
Sbjct: 305 TAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVW 364

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           ++MVS G   ++ T+N++++A CK  ++++AL +   +  + + P +  +  I++   + 
Sbjct: 365 EDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKG 424

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G ++ AL++F ++       + P  V++N +++G  K  ++E A  +   M+  G+  N 
Sbjct: 425 GHIQKALEVFDRIKTAG---LRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNE 481

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R+Y  L +GYAR G  E+A  +   M K  L  + V Y + +      G ++ A+ V   
Sbjct: 482 RSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQ 541

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           + D  +  +  TY  +  G  R G + +A  L   + +     D   Y   I    +S +
Sbjct: 542 ITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGD 601

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
                + L+ M  + L  +  TY TLI G+    + + A+  YE  K    + +  + N 
Sbjct: 602 TEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNC 661

Query: 505 IINGLCKDAS 514
           +++GL   AS
Sbjct: 662 LLSGLISCAS 671


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 180/726 (24%), Positives = 300/726 (41%), Gaps = 146/726 (20%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL 104
           ++  K L Q    L+ SLV  V+    + P   + F+ W G    + H+     A+V L+
Sbjct: 117 RKSQKFLRQFREKLSESLVIEVLRLIAR-PSAVISFFVWAGRQIGYKHTAPVYNALVDLI 175

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           V   R DD  +            P EFL+ + D  +  +      + LVR   + G+   
Sbjct: 176 V---RDDDEKV------------PEEFLQQIRDDDK--EVFGEFLNVLVRKHCRNGSFSI 218

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A + + +LK      S   +N  +   +K + +     +++EM       +  T     Y
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 225 ALCKECKLEEALSL-----------YYRMLKSGI---------------------WPNVV 252
           +LCK  K  EAL+L           +Y  L SG+                      PNVV
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338

Query: 253 C-----------------------------------FNMIINEACQVGDLEFALKLFRKM 277
                                               FN +++  C  GD  +A KL +KM
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398

Query: 278 GVMSGDSVLPNSVTHNCIINGFC------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            V  G   +P  V +N +I   C          ++ AE+    M+ AG+  N    ++  
Sbjct: 399 -VKCGH--MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A  +  EM+ +G +P+   Y+  +++L     +E A  +  +M    + 
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
            D +TY+I+    C+ G ++QA K  N++ E     +  +Y  LI+   K+  ++ A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM---KKV-------------EK 495
             +M+  G +P+I+TY  LIDG+CK G +E A Q++E M   K V              +
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQ-------------------RIGLLDAI-- 534
           +PN+V Y ++++G CK   ++ A+ LL A                     ++G LD    
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 535 ---------------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                          TY++LI+ YF   +   A  + S+M     A N V Y  +I+ LC
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A +LM++M   G  P+ VTYT ++  F      E  +EL + M   GV+P+  
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815

Query: 640 TYNAII 645
           TY  +I
Sbjct: 816 TYRVLI 821



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 216/468 (46%), Gaps = 26/468 (5%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKE-----CKLEE-ALSLYYRMLKSGIWPNVVCF 254
           +KL K+MV CG++     +N++I ++C +     C L + A   Y  ML +G+  N +  
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           +      C  G  E A  + R+M    G   +P++ T++ ++N  C   ++E A  +   
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREM---IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G+  +V TY  ++D + + G  E+A +  +EM + G  PN V Y + IH       
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA----- 429
           V  A  +   M+ +   P+  TYS L  G C+ G V++A ++  ++     V D      
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628

Query: 430 -----------YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
                       +Y  L++  CKS+ +  A++LL +M + G  P+ I Y  LIDG CK G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD-AAKSLLQASQRIGLLDAITYN 537
            ++ A +V   M +      L  Y+S+I+   K    D A+K L +  +     + + Y 
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            +I+G    GK  EA+ +   M   G   N V Y  +I+     G  +   EL++ M   
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           G+ P+YVTY  L+    KN + +    L ++M  +        Y  +I
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 53/503 (10%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+ + +++K  G    ++ +   +    K   I +  K + EM   G   NV T+  +
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----- 277
           I+A  K  K+  A  L+  ML  G  PN+V ++ +I+  C+ G +E A ++F +M     
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619

Query: 278 --------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
                        +S  PN VT+  +++GFCK  RVE A ++  AM   G + N   Y  
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDG  + G  +EA  +  EM + G       Y+S I   F     + A  VLS M++  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P+   Y+ +  GLC+ G   +A+KL  Q++EE                          
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEE-------------------------- 772

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
                   +G  P+++TY  +IDG+   G IE  +++ E M      PN V Y  +I+  
Sbjct: 773 --------KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK+ +LD A +LL+  ++         Y  +I G+  N +  E+  +  E+     A   
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFL 882

Query: 569 VGYNILINFLCKFGCYQQA-RELMKVMILHGIIPDY-VTYTTLVTRFSKNCSPEEVIELH 626
             Y +LI+ L K    + A R L +V      + DY  TY +L+         E   +L 
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 942

Query: 627 DDMVLSGVSPDNQTYNAIISPLL 649
            +M   GV P+ Q++ ++I  L 
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLF 965



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 165/349 (47%), Gaps = 7/349 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + AL+    +    E A  ++  + ++G   +   ++  +  L K+ ++    ++  EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G+   + T++ +I    K  + + A  +  +ML++   PNVV +  +I+  C+VG  
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A KL   M +M      PN VT+  +I+GF  +G++E   E+   M   G+  N  TY
Sbjct: 761 DEAYKL---MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LID   + G+ + A  L +EM +     +   Y   I   F +  +E +L +L ++  
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG-FNKEFIE-SLGLLDEIGQ 875

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV--LEEHMVGDAYSYNILINYLCKSNNL 445
               P    Y +L   L +   ++ A +L  +V      +V  + +YN LI  LC +N +
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
             A QL S M  +G+IP++ ++ +LI G  +   I  A+ + + +  +E
Sbjct: 936 ETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHME 984



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 9/322 (2%)

Query: 135 LLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD  S E C+    V+DAL+    ++G  + A +V  ++   G   +++ +++ +    
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K+       K+  +M+      NV  +  +I  LCK  K +EA  L   M + G  PNVV
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+    +G +E  L+L  +MG      V PN VT+  +I+  CK G ++ A  + 
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMG---SKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +     +   Y  +I+G+ +     E+L L DE+ +    P   VY   I  L   
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895

Query: 373 GDVEGALFVLSDM--IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             +E AL +L ++      +     TY+ L + LC    V+ AF+L +++ ++ ++ +  
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955

Query: 431 SYNILINYLCKSNNLAAAKQLL 452
           S+  LI  L +++ ++ A  LL
Sbjct: 956 SFCSLIKGLFRNSKISEALLLL 977



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 130/327 (39%), Gaps = 47/327 (14%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+  + R GS   AL     +      P+   YN  I        ++ A  +  +M   +
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  D FT       LC+ G  ++A  L   V  E+ V D   Y  LI+ LC+++    A 
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAM 322

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIING 508
             L+ M     +P+++TY TL+ G C      G  +   NM  +E   P+  I+NS+++ 
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 509 LCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGY-----FINGKIAE-AFAMFSEMRN 561
            C       A  LL+   + G +   + YN LI         +N  + + A   +SEM  
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+ +NK+  +     LC  G Y++A  +++ MI  G IP                    
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP-------------------- 481

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
                          D  TY+ +++ L
Sbjct: 482 ---------------DTSTYSKVLNYL 493



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 39/258 (15%)

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           ++L +  CRNG    A +   ++ +        +YN LI    K++ L +A  +   M +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
             L  D  T        CK G    A+ + E    V   P+ V Y  +I+GLC+ +  + 
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCEASLFEE 320

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A   L   +    L + +TY+TL+ G     ++     + + M   G   +   +N L++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             C  G +  A +L+K M+  G +P YV Y                              
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVY------------------------------ 410

Query: 637 DNQTYNAIISPLLGEKSA 654
                N +I  + G+K +
Sbjct: 411 -----NILIGSICGDKDS 423


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 222/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+   +L   M V SG  V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLDEGFRLKNAMQV-SG--VQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 IMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 36/314 (11%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQV 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  MI++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++  S+DA K            
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK------------ 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                  M  EM NVG+      Y ++IN  CK G      +L+
Sbjct: 368 -----------------------MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404

Query: 592 KVMILHGIIPDYVT 605
           K M   G +P  VT
Sbjct: 405 KEMQRDGYMPSVVT 418



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A  L   M+ +GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 VSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  MI+ G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M V G+ PD+ TY  LI+G CK   ++ A  +++ M      PN V + ++I+G CK+  
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 217/417 (52%), Gaps = 4/417 (0%)

Query: 93  SLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDA 151
           +L S C ++H L   +   +A  L+  ++S     S       + ++    ++   VF  
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSG 60

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+ A  + G    A +  +  +     V        L HL+KL      W  Y+E++ CG
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           Y  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++GDL+   
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG- 179

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
             FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ TLI
Sbjct: 180 --FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLI 237

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           DG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M  K + 
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 297

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  TY+ L  G C++G +  AF+   ++++E+   D   Y  LI+ LC+      A+++
Sbjct: 298 PDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKM 357

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 358 LREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 161/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 129 NILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 188

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 189 SGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDL 248

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 249 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLID 308

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V+Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 309 GCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKP 368

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 369 DARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 159/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 233

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 293

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G   +G +  AF     M      ++ V Y  LI+ LC+ G    
Sbjct: 294 KGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVD 353

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 354 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 107 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTL 166

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 167 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGL 226

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + +++T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 227 VPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 286

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K+   +   E    M+      D+  Y A+IS L 
Sbjct: 287 LIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLC 346

Query: 650 GEKSAED 656
            E  + D
Sbjct: 347 REGXSVD 353


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 234/489 (47%), Gaps = 10/489 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L  L G+  +   C     ++  ++ A    G    A  ++ ++ + G +  ++ +N+ +
Sbjct: 200 LALLRGM--ARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVV 257

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
             L  L  +    +L   M+  G   +V T+  ++  LC+  + +EA    Y ML     
Sbjct: 258 LGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA----YAMLGRVPE 313

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
            NVV  N +I      G L  A +L+  MG        P+  T+N +++G CKLGR   A
Sbjct: 314 VNVVMLNTVIRGCLAEGKLARATELYEMMG---SKGCPPDVHTYNILMHGLCKLGRCGSA 370

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
             +   M + G   N+ TY+TL+  + R G  ++A  + D+M  +G   N+  YN  I+ 
Sbjct: 371 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYA 430

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L  +G ++ A+ ++ +M  +   PD  TY+ +   LC N  + +A  +   +LEE +V +
Sbjct: 431 LGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVAN 490

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             +YN LI+ L  S       +L + M++ G   D+++Y  LI   CK GN++ ++ + E
Sbjct: 491 GITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLE 550

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            M     KPN   YN +IN LCK   +  A  L +     GL  D +TYNTLING    G
Sbjct: 551 EMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVG 610

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
               A  +  ++ N  +  + V YNILI++ CK      A  L+   +  GI+P+  T+ 
Sbjct: 611 WTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWG 670

Query: 608 TLVTRFSKN 616
            +V  F + 
Sbjct: 671 MMVQNFVRQ 679



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 249/556 (44%), Gaps = 25/556 (4%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFD 150
           + S  S  A++  L       DALLL   ++  + V P  F                 F 
Sbjct: 142 TPSFRSYNAVLSTLARADCHADALLLYRRMLR-DRVPPTTF----------------TFG 184

Query: 151 ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSC 210
              RA  ++G    A  +++ +   G       +   +  LV    +     L  EM+  
Sbjct: 185 VAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLM 244

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   +VNTFN V+  LC    + EA  L  RM+  G  P+VV +  ++   C+    + A
Sbjct: 245 GCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA 304

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             +  ++  +       N V  N +I G    G++  A E+   M   G   +V TY  L
Sbjct: 305 YAMLGRVPEV-------NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNIL 357

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           + G  + G    A+R+ DEM ++G  PN V Y++ +H     G  + A  +L  M  K  
Sbjct: 358 MHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGF 417

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             +   Y+ +   L ++G + +A +L  ++  +    D  +YN +I +LC ++ +  A+ 
Sbjct: 418 SMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEH 477

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +  +++  G++ + ITY TLI      G  +  +++   M       ++V YN +I  LC
Sbjct: 478 IFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALC 537

Query: 511 KDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K+ ++D +  LL+     G+  +  +YN LIN     GK+ +A  +  EM N G+  + V
Sbjct: 538 KEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIV 597

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YN LIN LCK G    A  L++ +    + PD VTY  L++   K    ++   L D  
Sbjct: 598 TYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKA 657

Query: 630 VLSGVSPDNQTYNAII 645
           V  G+ P+ +T+  ++
Sbjct: 658 VSGGIVPNERTWGMMV 673



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 227/472 (48%), Gaps = 8/472 (1%)

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           + S  ++N  LS L + +       LY+ M+         TF +   ALC+  +  +AL+
Sbjct: 142 TPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALA 201

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L   M + G  P+ V +  +I+     G +  A  L  +M +M   +   +  T N ++ 
Sbjct: 202 LLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA---DVNTFNDVVL 258

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G C LG V  A  +   M+  G   +V TY  L+ G  R   ++EA      M+ R    
Sbjct: 259 GLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY----AMLGRVPEV 314

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V+ N+ I    AEG +  A  +   M  K   PD  TY+IL  GLC+ G    A ++ 
Sbjct: 315 NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRML 374

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           +++ E+    +  +Y+ L++  C++     A+ +L  M  +G   +   Y  +I    K 
Sbjct: 375 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKD 434

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITY 536
           G ++ A+++ + MK    KP++  YN+II  LC +  +D A+ +       G++ + ITY
Sbjct: 435 GKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITY 494

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           NTLI+    +G+  E   + +EM   G  ++ V YN LI  LCK G   ++  L++ M+ 
Sbjct: 495 NTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT 554

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            GI P+  +Y  L+    K     + +EL  +M+  G++PD  TYN +I+ L
Sbjct: 555 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 207/457 (45%), Gaps = 8/457 (1%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +L        L + M   G V +   +  VI+AL  +  + EA +L   ML  G   +
Sbjct: 190 LCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAAD 249

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  FN ++   C +G +  A +L  +M +M G    P+ VT+  ++ G C+  + + A  
Sbjct: 250 VNTFNDVVLGLCGLGHVREAARLVDRM-MMHG--CTPSVVTYGFLLRGLCRTRQADEA-- 304

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
             YAM+    + NV    T+I G    G    A  L + M  +G  P+   YN  +H L 
Sbjct: 305 --YAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G    A+ +L +M +K   P+  TYS L    CRNG    A  + +Q+  +    ++ 
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            YN +I  L K   L  A +L+  M  +G  PDI TY T+I   C    ++ A  ++ N+
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKI 549
            +     N + YN++I+ L           L       G  LD ++YN LI      G +
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             +  +  EM   GI  N   YN+LIN LCK G  + A EL K M+  G+ PD VTY TL
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +    K       + L + +    V PD  TYN +IS
Sbjct: 603 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 196/424 (46%), Gaps = 9/424 (2%)

Query: 234 EALSLYYRMLKS-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
            AL L  +M +   + P+   +N +++   +      AL L+R+M     D V P + T 
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRM---LRDRVPPTTFTF 183

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
                  C+LGR   A  +   M + G   +   Y T+I      G   EA  L DEM+ 
Sbjct: 184 GVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL 243

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G   +   +N  +  L   G V  A  ++  M+     P   TY  L +GLCR     +
Sbjct: 244 MGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADE 303

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A+ +  +V E ++V      N +I        LA A +L   M  +G  PD+ TY  L+ 
Sbjct: 304 AYAMLGRVPEVNVV----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMH 359

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLL 531
           G CK G    AV++ + M++    PN+V Y+++++  C++   D A+++L Q S +   +
Sbjct: 360 GLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSM 419

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           ++  YN +I     +GK+ EA  +  EM++ G   +   YN +I  LC      +A  + 
Sbjct: 420 NSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIF 479

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             ++  G++ + +TY TL+     +   +E + L ++MVL G   D  +YN +I  L  E
Sbjct: 480 GNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKE 539

Query: 652 KSAE 655
            + +
Sbjct: 540 GNVD 543



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 187/387 (48%), Gaps = 17/387 (4%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT------------PAV--F 149
           L   R+ D+A  ++G +   N V     + G L   ++ +AT            P V  +
Sbjct: 295 LCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTY 354

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           + L+    ++G    A  ++ +++ KG + +I  ++  L    +         +  +M +
Sbjct: 355 NILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSA 414

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G+  N   +N +IYAL K+ KL+EA+ L   M   G  P++  +N II   C    ++ 
Sbjct: 415 KGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDE 474

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A  +F   G +  + V+ N +T+N +I+     GR +    +   M+  G   +V +Y  
Sbjct: 475 AEHIF---GNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNG 531

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    + G+ + ++ L +EM+ +G+ PNN  YN  I+ L   G V  AL +  +M+++ 
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD  TY+ L  GLC+ G    A  L  ++  E++  D  +YNILI++ CK   L  A 
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAS 651

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCK 476
            LL   +  G++P+  T+G ++  + +
Sbjct: 652 MLLDKAVSGGIVPNERTWGMMVQNFVR 678


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 180/726 (24%), Positives = 300/726 (41%), Gaps = 146/726 (20%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLL 104
           ++  K L Q    L+ SLV  V+    + P   + F+ W G    + H+     A+V L+
Sbjct: 76  RKSQKFLRQFREKLSESLVIEVLRLIAR-PSAVISFFVWAGRQIGYKHTAPVYNALVDLI 134

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           V   R DD  +            P EFL+ + D  +  +      + LVR   + G+   
Sbjct: 135 V---RDDDEKV------------PEEFLQQIRDDDK--EVFGQFLNVLVRKHCRNGSFSI 177

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A + + +LK      S   +N  +   +K + +     +++EM       +  T     Y
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237

Query: 225 ALCKECKLEEALSL-----------YYRMLKSGI---------------------WPNVV 252
           +LCK  K  EAL+L           +Y  L SG+                      PNVV
Sbjct: 238 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 297

Query: 253 C-----------------------------------FNMIINEACQVGDLEFALKLFRKM 277
                                               FN +++  C  GD  +A KL +KM
Sbjct: 298 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 357

Query: 278 GVMSGDSVLPNSVTHNCIINGFC------KLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            V  G   +P  V +N +I   C          ++ AE+    M+ AG+  N    ++  
Sbjct: 358 -VKCGH--MPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFT 414

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E+A  +  EM+ +G +P+   Y+  +++L     +E A  +  +M    + 
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
            D +TY+I+    C+ G ++QA K  N++ E     +  +Y  LI+   K+  ++ A +L
Sbjct: 475 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 534

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM---KKV-------------EK 495
             +M+  G +P+I+TY  LIDG+CK G +E A Q++E M   K V              +
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 594

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQ-------------------RIGLLDAI-- 534
           +PN+V Y ++++G CK   ++ A+ LL A                     ++G LD    
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654

Query: 535 ---------------TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                          TY++LI+ YF   +   A  + S+M     A N V Y  +I+ LC
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G   +A +LM++M   G  P+ VTYT ++  F      E  +EL + M   GV+P+  
Sbjct: 715 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 774

Query: 640 TYNAII 645
           TY  +I
Sbjct: 775 TYRVLI 780



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 205/439 (46%), Gaps = 26/439 (5%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECK------LEEALSLYYRMLKSGIWPNVVCF 254
           +KL K+MV CG++     +N++I ++C +        L+ A   Y  ML +G+  N +  
Sbjct: 351 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINV 410

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           +      C  G  E A  + R+M    G   +P++ T++ ++N  C   ++E A  +   
Sbjct: 411 SSFTRCLCSAGKYEKAFSVIREM---IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 467

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M + G+  +V TY  ++D + + G  E+A +  +EM + G  PN V Y + IH       
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA----- 429
           V  A  +   M+ +   P+  TYS L  G C+ G V++A ++  ++     V D      
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587

Query: 430 -----------YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
                       +Y  L++  CKS+ +  A++LL +M + G  P+ I Y  LIDG CK G
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD-AAKSLLQASQRIGLLDAITYN 537
            ++ A +V   M +      L  Y+S+I+   K    D A+K L +  +     + + Y 
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
            +I+G    GK  EA+ +   M   G   N V Y  +I+     G  +   EL++ M   
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767

Query: 598 GIIPDYVTYTTLVTRFSKN 616
           G+ P+YVTY  L+    KN
Sbjct: 768 GVAPNYVTYRVLIDHCCKN 786



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 222/503 (44%), Gaps = 53/503 (10%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A+ + +++K  G    ++ +   +    K   I +  K + EM   G   NV T+  +
Sbjct: 459 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 518

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----- 277
           I+A  K  K+  A  L+  ML  G  PN+V ++ +I+  C+ G +E A ++F +M     
Sbjct: 519 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 578

Query: 278 --------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
                        +S  PN VT+  +++GFCK  RVE A ++  AM   G + N   Y  
Sbjct: 579 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 638

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LIDG  + G  +EA  +  EM + G       Y+S I   F     + A  VLS M++  
Sbjct: 639 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 698

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P+   Y+ +  GLC+ G   +A+KL  Q++EE                          
Sbjct: 699 CAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEE-------------------------- 731

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
                   +G  P+++TY  +IDG+   G IE  +++ E M      PN V Y  +I+  
Sbjct: 732 --------KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 783

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK+ +LD A +LL+  ++         Y  +I G+  N +  E+  +  E+     A   
Sbjct: 784 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFL 841

Query: 569 VGYNILINFLCKFGCYQQA-RELMKVMILHGIIPDY-VTYTTLVTRFSKNCSPEEVIELH 626
             Y +LI+ L K    + A R L +V      + DY  TY +L+         E   +L 
Sbjct: 842 SVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLF 901

Query: 627 DDMVLSGVSPDNQTYNAIISPLL 649
            +M   GV P+ Q++ ++I  L 
Sbjct: 902 SEMTKKGVIPEMQSFCSLIKGLF 924



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 9/322 (2%)

Query: 135 LLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD  S E C+    V+DAL+    ++G  + A +V  ++   G   +++ +++ +    
Sbjct: 620 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 679

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K+       K+  +M+      NV  +  +I  LCK  K +EA  L   M + G  PNVV
Sbjct: 680 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 739

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +  +I+    +G +E  L+L  +MG      V PN VT+  +I+  CK G ++ A  + 
Sbjct: 740 TYTAMIDGFGMIGKIETCLELLERMG---SKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 796

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M +     +   Y  +I+G+ +     E+L L DE+ +    P   VY   I  L   
Sbjct: 797 EEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 854

Query: 373 GDVEGALFVLSDM--IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             +E AL +L ++      +     TY+ L + LC    V+ AF+L +++ ++ ++ +  
Sbjct: 855 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 914

Query: 431 SYNILINYLCKSNNLAAAKQLL 452
           S+  LI  L +++ ++ A  LL
Sbjct: 915 SFCSLIKGLFRNSKISEALLLL 936



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 130/328 (39%), Gaps = 49/328 (14%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+  + R GS   AL     +      P+   YN  I        ++ A  +  +M   +
Sbjct: 165 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 224

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  D FT       LC+ G  ++A  L   V  E+ V D   Y  LI+ LC+++    A 
Sbjct: 225 LRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAM 281

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIING 508
             L+ M     +P+++TY TL+ G C      G  +   NM  +E   P+  I+NS+++ 
Sbjct: 282 DFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340

Query: 509 LCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM-------FSEMR 560
            C       A  LL+   + G +   + YN LI G     K +  F +       +SEM 
Sbjct: 341 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNFDLLDLAEKAYSEML 399

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+ +NK+  +     LC  G Y++A  +++ MI  G IP                   
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP------------------- 440

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPL 648
                           D  TY+ +++ L
Sbjct: 441 ----------------DTSTYSKVLNYL 452



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/272 (21%), Positives = 104/272 (38%), Gaps = 15/272 (5%)

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           KH  P    Y+ L   + R+   K   +   Q+ ++         N+L+   C++ + + 
Sbjct: 121 KHTAP---VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSI 177

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A + L  +      P   TY  LI  + K   ++ A  ++  M     + +         
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            LCK      A +L++    +   D + Y  LI+G        EA    + MR      N
Sbjct: 238 SLCKVGKWREALTLVETENFVP--DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 295

Query: 568 KVGYNILINFLCKFGCYQQA-----RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
            V Y+ L   LC  GC  +      + ++ +M++ G  P    + +LV  +  +      
Sbjct: 296 VVTYSTL---LC--GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA 350

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
            +L   MV  G  P    YN +I  + G+K +
Sbjct: 351 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDS 382


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 240/449 (53%), Gaps = 16/449 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +Y +M++CG   +V   N++I++ CK  +L  A+SL    +   I  + V +N +I+  C
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLC 172

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  + A +   +M  M    +LP++V++N +I+GFCK+G    A+    A++    + 
Sbjct: 173 EHGLADEAYQFLSEMVKMG---ILPDTVSYNTLIDGFCKVGNFVRAK----ALVDEISEL 225

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV-EGALFV 381
           N+ T+  L+  Y    + EEA R   +MV  G  P+ V ++S I+ L   G V EG L +
Sbjct: 226 NLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL-L 281

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M +  + P+H TY+ L   L +    + A  L++Q++   +  D   Y +L++ L K
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L  A++    ++    +P+++TY  L+DG CK G++  A  +   M +    PN+V 
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 401

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+S+ING  K   L+ A SLL+  +   ++ +  TY T+I+G F  GK   A  +  EMR
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 461

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
            +G+  N    + L+N L + G  ++ + L+K M+  G+  D + YT+L+  F K    E
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEE 521

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             +   ++M   G+  D  +YN +IS +L
Sbjct: 522 AALAWAEEMQERGMPWDVVSYNVLISGML 550



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 250/556 (44%), Gaps = 42/556 (7%)

Query: 130 EFLEG--LLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           + LEG  LL   E     P    +  LV +  +      A  +  ++ V+G  V +  + 
Sbjct: 274 KVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYT 333

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             +  L K  ++    K +K ++    V NV T+  ++  LCK   L  A  +  +ML+ 
Sbjct: 334 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
            + PNVV ++ +IN   + G LE A+ L RKM      +V+PN  T+  +I+G  K G+ 
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM---EDQNVVPNGFTYGTVIDGLFKAGKE 450

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           E A E+   M   G++ N      L++   R G  +E   L  +MV +G+  + + Y S 
Sbjct: 451 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 510

Query: 366 IHWLFAEGDVE----------------------------------GALFVLSDMIDKHIC 391
           I   F  GD E                                  GA +    M +K I 
Sbjct: 511 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIE 570

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  T++I+     + G  +   KL +++    +     S NI++  LC++  +  A  +
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L+ M++  + P++ TY   +D   K    +   + +E +     K +  +YN++I  LCK
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
                 A  ++   +  G + D +T+N+L++GYF+   + +A + +S M   GI+ N   
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN +I  L   G  ++  + +  M   G+ PD  TY  L++  +K  + +  + ++ +M+
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810

Query: 631 LSGVSPDNQTYNAIIS 646
             G+ P   TYN +IS
Sbjct: 811 ADGLVPKTSTYNVLIS 826



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 226/478 (47%), Gaps = 9/478 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +++    + G  E A  +++K++ +    +   +   +  L K  +     +L KEM
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G  EN    + ++  L +  +++E   L   M+  G+  + + +  +I+   + GD 
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520

Query: 268 EFALKLFRKMGVMSGDSVLP-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           E AL    +M     +  +P + V++N +I+G  K G+V  A+     M + GI+ ++ T
Sbjct: 521 EAALAWAEEMQ----ERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIAT 575

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  +++   + G SE  L+L D+M   G+ P+ +  N  +  L   G +E A+ +L+ M+
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              I P+  TY I      ++      FK H  +L   +      YN LI  LCK     
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTK 695

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  ++  M  RG IPD +T+ +L+ GY  G ++  A+  Y  M +    PN+  YN+II
Sbjct: 696 KAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTII 755

Query: 507 NGLCKDASL--DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
            GL  DA L  +  K L +   R    D  TYN LI+G    G +  +  ++ EM   G+
Sbjct: 756 RGLS-DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGL 814

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
                 YN+LI+     G   QAREL+K M   G+ P+  TY T+++   K C+  +V
Sbjct: 815 VPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 872



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 240/537 (44%), Gaps = 40/537 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+  L+    + G    A    + L       ++  +   +  L K  ++     +  +M
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +    + NV T++ +I    K+  LEEA+SL  +M    + PN   +  +I+   + G  
Sbjct: 391 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A++L ++M ++    V  N+   + ++N   ++GR++  + +   M+  G+  +   Y
Sbjct: 451 EMAIELSKEMRLIG---VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 507

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LID + +GG  E AL   +EM +RG+  + V YN  I  +   G V GA +    M +
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMRE 566

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD  T++I+     + G  +   KL +++    +     S NI++  LC++  +  
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L+ M++  + P++ TY   +D   K    +   + +E +     K +  +YN++I 
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LCK      A  ++   +  G + D +T+N+L++GYF+   + +A + +S M   GI+ 
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVM-------------------------------- 594
           N   YN +I  L   G  ++  + +  M                                
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806

Query: 595 ---ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              I  G++P   TY  L++ F+      +  EL  +M   GVSP+  TY  +IS L
Sbjct: 807 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 240/449 (53%), Gaps = 16/449 (3%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +Y +M++CG   +V   N++I++ CK  +L  A+SL    +   I  + V +N +I+  C
Sbjct: 118 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLC 174

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  + A +   +M  M    +LP++V++N +I+GFCK+G    A+    A++    + 
Sbjct: 175 EHGLADEAYQFLSEMVKMG---ILPDTVSYNTLIDGFCKVGNFVRAK----ALVDEISEL 227

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV-EGALFV 381
           N+ T+  L+  Y    + EEA R   +MV  G  P+ V ++S I+ L   G V EG L +
Sbjct: 228 NLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL-L 283

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M +  + P+H TY+ L   L +    + A  L++Q++   +  D   Y +L++ L K
Sbjct: 284 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 343

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           + +L  A++    ++    +P+++TY  L+DG CK G++  A  +   M +    PN+V 
Sbjct: 344 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 403

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+S+ING  K   L+ A SLL+  +   ++ +  TY T+I+G F  GK   A  +  EMR
Sbjct: 404 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 463

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
            +G+  N    + L+N L + G  ++ + L+K M+  G+  D + YT+L+  F K    E
Sbjct: 464 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEE 523

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             +   ++M   G+  D  +YN +IS +L
Sbjct: 524 AALAWAEEMQERGMPWDVVSYNVLISGML 552



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 250/556 (44%), Gaps = 42/556 (7%)

Query: 130 EFLEG--LLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           + LEG  LL   E     P    +  LV +  +      A  +  ++ V+G  V +  + 
Sbjct: 276 KVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYT 335

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             +  L K  ++    K +K ++    V NV T+  ++  LCK   L  A  +  +ML+ 
Sbjct: 336 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 395

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
            + PNVV ++ +IN   + G LE A+ L RKM      +V+PN  T+  +I+G  K G+ 
Sbjct: 396 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM---EDQNVVPNGFTYGTVIDGLFKAGKE 452

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           E A E+   M   G++ N      L++   R G  +E   L  +MV +G+  + + Y S 
Sbjct: 453 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 512

Query: 366 IHWLFAEGDVE----------------------------------GALFVLSDMIDKHIC 391
           I   F  GD E                                  GA +    M +K I 
Sbjct: 513 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIE 572

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  T++I+     + G  +   KL +++    +     S NI++  LC++  +  A  +
Sbjct: 573 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 632

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L+ M++  + P++ TY   +D   K    +   + +E +     K +  +YN++I  LCK
Sbjct: 633 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 692

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
                 A  ++   +  G + D +T+N+L++GYF+   + +A + +S M   GI+ N   
Sbjct: 693 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 752

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN +I  L   G  ++  + +  M   G+ PD  TY  L++  +K  + +  + ++ +M+
Sbjct: 753 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 812

Query: 631 LSGVSPDNQTYNAIIS 646
             G+ P   TYN +IS
Sbjct: 813 ADGLVPKTSTYNVLIS 828



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 239/511 (46%), Gaps = 12/511 (2%)

Query: 116 LMGNLMSANSVSPLEFL-EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           L+  L  A  +S  EF+   +L+   I       + +++    + G  E A  +++K++ 
Sbjct: 372 LVDGLCKAGDLSSAEFIITQMLEKSVIPNV--VTYSSMINGYVKKGMLEEAVSLLRKMED 429

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +    +   +   +  L K  +     +L KEM   G  EN    + ++  L +  +++E
Sbjct: 430 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 489

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP-NSVTHN 293
              L   M+  G+  + + +  +I+   + GD E AL    +M     +  +P + V++N
Sbjct: 490 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ----ERGMPWDVVSYN 545

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I+G  K G+V  A+     M + GI+ ++ T+  +++   + G SE  L+L D+M   
Sbjct: 546 VLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 604

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G+ P+ +  N  +  L   G +E A+ +L+ M+   I P+  TY I      ++      
Sbjct: 605 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 664

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           FK H  +L   +      YN LI  LCK      A  ++  M  RG IPD +T+ +L+ G
Sbjct: 665 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 724

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL--DAAKSLLQASQRIGLL 531
           Y  G ++  A+  Y  M +    PN+  YN+II GL  DA L  +  K L +   R    
Sbjct: 725 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS-DAGLIKEVDKWLSEMKSRGMRP 783

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D  TYN LI+G    G +  +  ++ EM   G+      YN+LI+     G   QAREL+
Sbjct: 784 DDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELL 843

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           K M   G+ P+  TY T+++   K C+  +V
Sbjct: 844 KEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 874



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/537 (23%), Positives = 240/537 (44%), Gaps = 40/537 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+  L+    + G    A    + L       ++  +   +  L K  ++     +  +M
Sbjct: 333 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 392

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +    + NV T++ +I    K+  LEEA+SL  +M    + PN   +  +I+   + G  
Sbjct: 393 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 452

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A++L ++M ++    V  N+   + ++N   ++GR++  + +   M+  G+  +   Y
Sbjct: 453 EMAIELSKEMRLIG---VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY 509

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LID + +GG  E AL   +EM +RG+  + V YN  I  +   G V GA +    M +
Sbjct: 510 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMRE 568

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K I PD  T++I+     + G  +   KL +++    +     S NI++  LC++  +  
Sbjct: 569 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 628

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L+ M++  + P++ TY   +D   K    +   + +E +     K +  +YN++I 
Sbjct: 629 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 688

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            LCK      A  ++   +  G + D +T+N+L++GYF+   + +A + +S M   GI+ 
Sbjct: 689 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 748

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVM-------------------------------- 594
           N   YN +I  L   G  ++  + +  M                                
Sbjct: 749 NVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 808

Query: 595 ---ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              I  G++P   TY  L++ F+      +  EL  +M   GVSP+  TY  +IS L
Sbjct: 809 CEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 865


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/626 (23%), Positives = 300/626 (47%), Gaps = 63/626 (10%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRF---DDALLLMGNLMSANSVSPL 129
           +P LA+E +  +       HS  +      L+  +RR    D  L ++G L+  N + P 
Sbjct: 132 APALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLK-NGLGPD 190

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           +F      SY           +L+    + G  + A+ +  ++  +G    I   N+ + 
Sbjct: 191 DF------SY-----------SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIK 233

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+ E+ +   + ++MV  G   ++ T++L+I  LCK   +++A  +  +M+++G  P
Sbjct: 234 ELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRP 293

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N + +N +I+     G    ++++F++M   S   V+P     N  I+   K GR   A+
Sbjct: 294 NSITYNSLIHGYSISGMWNESVRVFKQM---SSCGVIPTVDNCNSFIHALFKHGRTNEAK 350

Query: 310 EIRYAMIKAGIDCNVRTYAT-------------------------------------LID 332
            I  +M+  G   ++ +Y+T                                     LI+
Sbjct: 351 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 410

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
            YAR G  ++A+ + ++M  +G++P+ V + + I  L   G ++ AL   + M+D  + P
Sbjct: 411 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 470

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAAAKQL 451
               Y  L +G C +G + +A +L ++++ + +      Y + +IN LCK   +A  K +
Sbjct: 471 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 530

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M+  G  P+++T+ +L++GYC  GN+E A  + + M  +  +PN  IY ++++G CK
Sbjct: 531 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 590

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  +D A ++ +     G+   ++ Y+ +++G F   +   A  MF EM   G  V+   
Sbjct: 591 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 650

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y +++  LC+  C  +A  L++ +    +  D +T+  +++   K    +E  EL D + 
Sbjct: 651 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 710

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G+ P+ QTY+ +I+ L+ E+S E+
Sbjct: 711 TYGLVPNIQTYSMMITNLIKEESYEE 736



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 4/377 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  + G  + A  + + ++ KG       +   +S L ++  +      +  M
Sbjct: 404 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 463

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVGD 266
           V  G   +   +  +I   C   +L +A  L   M+   I P  V  F+ IIN  C+ G 
Sbjct: 464 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 523

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +    K    M V +G    PN VT N ++ G+C +G +E A  +  AM   GI+ N   
Sbjct: 524 VAEG-KDIMDMMVQTGQR--PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 580

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY + G  ++AL +  +M+ +G+ P +V+Y+  +H LF       A  +  +MI
Sbjct: 581 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 640

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +        TY ++  GLCRN C  +A  L  ++   ++  D  ++NI+I+ + K     
Sbjct: 641 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 700

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK+L  ++   GL+P+I TY  +I    K  + E A  ++ +++K     +  + N I+
Sbjct: 701 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 760

Query: 507 NGLCKDASLDAAKSLLQ 523
             L   A +  A + L 
Sbjct: 761 RMLLNKAEVAKASNYLS 777



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 21/188 (11%)

Query: 91  SHSLESSCAIVHLLVNW----RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           S  +E +C I   LV+      R DDAL +  +++                 ++  K T 
Sbjct: 571 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML-----------------HKGVKPTS 613

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            ++  ++    Q   T  A  +  ++   G +VSIH +   L  L + N       L ++
Sbjct: 614 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 673

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           + +     ++ TFN+VI A+ K  + +EA  L+  +   G+ PN+  ++M+I    +   
Sbjct: 674 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 733

Query: 267 LEFALKLF 274
            E A  LF
Sbjct: 734 YEEADNLF 741


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 209/424 (49%), Gaps = 17/424 (4%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C E  +   + +Y  M K G+ PNV  +N+++   CQ   +  A K+  +M   +     
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEM---ARKGCP 191

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+ VT+  I++  CKL R++ A E+  AM          +Y  ++    R    +E   +
Sbjct: 192 PDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAA-----SYNAIVLALCREFRMQEVFSV 246

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +MV RGL PN + Y + +      G++  A  +L+ M+     P+  T++ L +GL  
Sbjct: 247 VSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFD 306

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           +G V  A  +   ++ E       SYNILI  LC   +L  A  +L+SM   G  P++ T
Sbjct: 307 DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRT 366

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDG+ K G++ GA+ ++ +M +   KPN+V+Y ++++  CK    + AKSL+    
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM- 425

Query: 527 RIGLLD-----AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              LL+      +T+NTLI       ++  A  +F EMR  G   N   YN LI+ L + 
Sbjct: 426 ---LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFRE 482

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G    A  ++  M  HGI    VTY T+V+   +     E +     M++ G+ P+  T+
Sbjct: 483 GNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTF 542

Query: 642 NAII 645
           +AII
Sbjct: 543 SAII 546



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 207/422 (49%), Gaps = 9/422 (2%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
           N +G    +Y  M   G   NV T+NL++ ALC+  ++  A  +   M + G  P+ V +
Sbjct: 138 NMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTY 197

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
             I++  C++  L+ A ++   M         P + ++N I+   C+  R++    +   
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMP--------PVAASYNAIVLALCREFRMQEVFSVVSD 249

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M+  G+  NV TY T++D + + G    A  +   MV  G  PN V + + +  LF +G 
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V  AL +   M+ +   P   +Y+IL +GLC  G +K A  + N + +     +  +Y+ 
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+   K+ +L  A  + + M   G  P+++ Y  ++D +CK      A  + + M    
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             PN V +N++I  LC    +  A  +    +R G + +  TYN LI+G F  G   +A 
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 489

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            M +EM++ GI ++ V YN +++ LC+    ++A   +  MI+ GI P+  T++ ++  +
Sbjct: 490 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 549

Query: 614 SK 615
            K
Sbjct: 550 CK 551



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 229/493 (46%), Gaps = 22/493 (4%)

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +GA    YD ++K    G   ++  +N  +  L + N +G   K+  EM   G   +  T
Sbjct: 140 VGAVVLVYDNMRK---DGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVT 196

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK-LFRKM 277
           +  ++  LCK  +L+EA  +   M      P    +N I+   C+    EF ++ +F  +
Sbjct: 197 YATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCR----EFRMQEVFSVV 247

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M G  + PN +T+  I++ FCK G +  A  I   M+  G   NV T+  L+ G    
Sbjct: 248 SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDD 307

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFT 396
           G   +AL +   MV  G  P+ V YN  I  L + GD++GA  +L+ M ++H C P+  T
Sbjct: 308 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM-EQHGCFPNVRT 366

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           YS L  G  + G +  A  + N +       +   Y  +++  CK      AK L+  M+
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 426

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
           +    P+ +T+ TLI   C    +  A+ V+  M++    PN   YN +I+GL ++ +  
Sbjct: 427 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 486

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A  ++   Q  G+ L  +TYNT+++G        EA     +M   GI  N   ++ +I
Sbjct: 487 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 546

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD---DMVLS 632
           +  CK G  + A  ++  M +     + + YT L+      C+ +++++       M+  
Sbjct: 547 HAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL---CNQDKLVDAMTYLLKMLYE 603

Query: 633 GVSPDNQTYNAII 645
           G+ P+  T+N ++
Sbjct: 604 GIYPNTVTWNVLV 616



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 229/497 (46%), Gaps = 23/497 (4%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF  + LVRA  Q      A  ++ ++  KG       +   +S L KL+ +    ++
Sbjct: 157 PNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 216

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
              M          ++N ++ ALC+E +++E  S+   M+  G+ PNV+ +  I++  C+
Sbjct: 217 LAAMPPVAA-----SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCK 271

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G+L  A  +  +M V++G +  PN VT   ++ G    GRV  A ++   M+  G   +
Sbjct: 272 AGELRMACAILARM-VITGCT--PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 328

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y  LI G    G  + A  + + M + G  PN   Y++ I      GD+ GA+ + +
Sbjct: 329 TVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWN 388

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           DM      P+   Y+ +    C+     QA  L +++L E+   +  ++N LI  LC   
Sbjct: 389 DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCR 448

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  +   M   G +P+  TY  LI G  + GN   A+ +   M+    + +LV YN
Sbjct: 449 RVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYN 508

Query: 504 SIINGLC-----KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           ++++GLC     ++A +   K ++Q  Q     +A T++ +I+ Y   G++  A  M   
Sbjct: 509 TVVSGLCQTRMSREAMVFVGKMIVQGIQP----NAFTFSAIIHAYCKEGEVRMAAWMLGA 564

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M  V    N + Y IL+  LC       A   +  M+  GI P+ VT+  LV    +N  
Sbjct: 565 MNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLG 624

Query: 619 ---PEEVIELHDDMVLS 632
              P + I+ H  M LS
Sbjct: 625 CIEPSDFIQ-HITMNLS 640



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 197/428 (46%), Gaps = 7/428 (1%)

Query: 123 ANSVSPLEFLEGLLDSYEICKATPAV---FDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           A  VS L  L+ L ++ E+  A P V   ++A+V A  +    +  + V+  +  +G   
Sbjct: 198 ATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQP 257

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++  +   +    K  E+     +   MV  G   NV TF  ++  L  + ++ +AL ++
Sbjct: 258 NVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMW 317

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M+  G  P+ V +N++I   C VGDL+ A  +      M      PN  T++ +I+GF
Sbjct: 318 RWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS---MEQHGCFPNVRTYSTLIDGF 374

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
            K G +  A  I   M ++G   NV  Y  ++D + +     +A  L D+M+     PN 
Sbjct: 375 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 434

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V +N+ I  L     V  AL V  +M      P+  TY+ L  GL R G    A  +  +
Sbjct: 435 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 494

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +    +     +YN +++ LC++     A   +  MIV+G+ P+  T+  +I  YCK G 
Sbjct: 495 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 554

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLC-KDASLDAAKSLLQASQRIGLLDAITYNT 538
           +  A  +   M  V    N+++Y  ++  LC +D  +DA   LL+        + +T+N 
Sbjct: 555 VRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 614

Query: 539 LINGYFIN 546
           L+ G F N
Sbjct: 615 LVRGVFRN 622



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 170/378 (44%), Gaps = 41/378 (10%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M K G+  NV TY  L+    +      A ++ DEM ++G  P++V Y + +  L     
Sbjct: 150 MRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDR 209

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A  VL+ M      P   +Y+ +   LCR   +++ F + + ++   +  +  +Y  
Sbjct: 210 LDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTT 264

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           +++  CK+  L  A  +L+ M++ G  P+++T+  L+ G    G +  A+ ++  M    
Sbjct: 265 IVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEG 324

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAF 553
             P+ V YN +I GLC    L  A S+L + ++ G    + TY+TLI+G+   G +  A 
Sbjct: 325 WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAI 384

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL----------------- 596
           +++++M   G   N V Y  +++  CK   + QA+ L+  M+L                 
Sbjct: 385 SIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSL 444

Query: 597 ------------------HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
                             HG +P+  TY  L+    +  +  + + +  +M   G+    
Sbjct: 445 CDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSL 504

Query: 639 QTYNAIISPLLGEKSAED 656
            TYN ++S L   + + +
Sbjct: 505 VTYNTVVSGLCQTRMSRE 522



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 137/302 (45%), Gaps = 6/302 (1%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           D M K G+ PN   YN  +  L     V  A  +L +M  K   PD  TY+ +   LC+ 
Sbjct: 148 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 207

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             + +A     +VL   M   A SYN ++  LC+   +     ++S M+ RGL P++ITY
Sbjct: 208 DRLDEA----TEVLAA-MPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITY 262

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            T++D +CK G +  A  +   M      PN+V + +++ GL  D  +  A  + +    
Sbjct: 263 TTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVA 322

Query: 528 IGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G   + ++YN LI G    G +  A ++ + M   G   N   Y+ LI+   K G    
Sbjct: 323 EGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGG 382

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  +   M   G  P+ V YT +V  F K     +   L D M+L    P+  T+N +I 
Sbjct: 383 AISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIR 442

Query: 647 PL 648
            L
Sbjct: 443 SL 444



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 4/209 (1%)

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C  N + A   +  +M   G+ P++ TY  L+   C+   +  A ++ + M +    P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
           V Y +I++ LCK   LD A  +L A   +    A +YN ++       ++ E F++ S+M
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPV----AASYNAIVLALCREFRMQEVFSVVSDM 250

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
              G+  N + Y  +++  CK G  + A  ++  M++ G  P+ VT+T LV     +   
Sbjct: 251 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRV 310

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            + +++   MV  G +P   +YN +I  L
Sbjct: 311 HDALDMWRWMVAEGWAPSTVSYNILIRGL 339


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 256/520 (49%), Gaps = 7/520 (1%)

Query: 143 KATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K  P+V D   L +    +        + +++++ G  +S    N   +     + I   
Sbjct: 57  KPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCA 116

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI-WPNVVCFNMIIN 259
           + +    +  G   NV TFN ++  L  E K+ +A+ L+ ++++  I  PN V +  ++N
Sbjct: 117 FSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMN 176

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              + G  E  L L R   +M   +  P+  T++ +I+  CK   ++ A  +   M +  
Sbjct: 177 GLSKRGHTEKTLSLLR---IMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKN 233

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N+ TY +LIDG  + G  E+   L  EMV   + PN   ++  I  L  EG VE A 
Sbjct: 234 IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDAD 293

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V+  MI+K + PD  TYS +  G C  G V +A ++ N + ++ +  + +SY+ILIN  
Sbjct: 294 EVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGY 353

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK  NLA A QL   +  +GL PD +TY T++ G  + G I  A ++++ M +V   P++
Sbjct: 354 CKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDI 413

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSE 558
            ++++++ G  K   ++ A  L    +R      I+ Y  +ING   N ++ EA A+F +
Sbjct: 414 CLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEK 473

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           + ++G+  +   YN++I   C+ G + + + +++ M  +G   + +TY  ++  F ++  
Sbjct: 474 LPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNK 533

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             E++    +M   G S D  T   +I+ L    S  D +
Sbjct: 534 ISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 232/464 (50%), Gaps = 5/464 (1%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVI 223
           A+ V+      G   ++  +N  L  L   N++     L+K++V     E N   +  V+
Sbjct: 116 AFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVM 175

Query: 224 YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
             L K    E+ LSL   M +    P+V  ++++I+  C+  +L+ A+ L  +M      
Sbjct: 176 NGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM---KQK 232

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           ++ PN  T+N +I+G CKLG+ E  + +   M+   I+ NV T++ LIDG  + G  E+A
Sbjct: 233 NIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDA 292

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             +   M+++G+ P+ + Y++ +      G V+ A  V + + DK I P+ F+YSIL  G
Sbjct: 293 DEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILING 352

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            C+   + +A +L  ++ ++ +  D  +Y+ +++ L +   +  AK++   M+  G  PD
Sbjct: 353 YCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPD 412

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I  + TL+ GY K G +E A+ ++  +++  +  N+  Y  +INGLCK+  +  A ++ +
Sbjct: 413 ICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFE 472

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
               IGL+ D  TYN +I G+   G   E   +  +M + G   N + YN+++    +  
Sbjct: 473 KLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSN 532

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
              +    MK M   G   D  T   L+    +N S  ++I  H
Sbjct: 533 KISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMIPDH 576



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 217/464 (46%), Gaps = 39/464 (8%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           L+G L + N V+    L   L   +IC+    ++  ++   ++ G TE    +++ ++  
Sbjct: 138 LLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQG 197

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
                +  ++  +  L K   +     L  EM       N+ T+N +I  LCK  + E+ 
Sbjct: 198 NTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKV 257

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
            +L   M+   I PNV  F+++I+  C+ G +E A ++ R M +  G  V P+ +T++ I
Sbjct: 258 KTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM-IEKG--VEPDIITYSAI 314

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           ++G+C  G+V+ A  +   +   GI  N+ +Y+ LI+GY +  +  +A++L  E+ ++GL
Sbjct: 315 MDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGL 374

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            P+ V Y++ +H L   G +  A  +  +M+     PD   +S L  G  + G V++A  
Sbjct: 375 KPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAML 434

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L +++       +   Y ++IN LCK++ +  A  +   +   GLIPD+ TY  +I G+C
Sbjct: 435 LFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFC 494

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           + G                                     D  K +L+  +  G   + I
Sbjct: 495 REG-----------------------------------LFDEVKGILRKMEDNGCPANNI 519

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           TYN ++ G+F + KI+E  +   EM   G + +     +LIN L
Sbjct: 520 TYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 3/259 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A  V   L+ KG   +I +++  ++   K   + +  +L+ E+   G   +  T+
Sbjct: 322 GQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           + +++ L +  ++ +A  ++  ML+ G  P++   + ++    + G +E A+ LF K+  
Sbjct: 382 STILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLER 441

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              D+   N   +  +ING CK  RV  A  I   +   G+  +VRTY  +I G+ R G 
Sbjct: 442 NREDT---NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGL 498

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +E   +  +M   G   NN+ YN  +   F    +   +  + +M  +    D  T  +
Sbjct: 499 FDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGV 558

Query: 400 LTKGLCRNGCVKQAFKLHN 418
           L   L  N  +      H+
Sbjct: 559 LINVLKENPSIVDMIPDHS 577



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 37/275 (13%)

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           C+  A  L ++++    +     ++ L   +    + +A   L   M + G+        
Sbjct: 42  CLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILN 101

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQ 526
            + + YC    I+ A  V     K     N+V +N+++ GL  +  +  A  L +    +
Sbjct: 102 IVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVRE 161

Query: 527 RIGLLDAITYNTLINGYFING---------KIAE-------------------------- 551
           +I   + + Y T++NG    G         +I E                          
Sbjct: 162 KICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDA 221

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  + +EM+   I  N   YN LI+ LCK G +++ + L+  M+   I P+  T++ L+ 
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILID 281

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
              K    E+  E+   M+  GV PD  TY+AI+ 
Sbjct: 282 GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMD 316


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 224/442 (50%), Gaps = 5/442 (1%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EMV  G+V   N FN ++  +       +  S ++   KS +  +V  F ++I   C+
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS-FFNENKSKVVLDVYSFGILIKGCCE 175

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G++E +  L  ++         PN V +  +I+G CK G +E A+++ + M K G+  N
Sbjct: 176 AGEIEKSFDLLIELTEFG---FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
            RTY  LI+G  + G  ++   + ++M + G+ PN   YN  ++ L  +G  + A  V  
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M ++ +  +  TY+ L  GLCR   + +A K+ +Q+  + +  +  +YN LI+  C   
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            L  A  L   +  RGL P ++TY  L+ G+C+ G+  GA ++ + M++   KP+ V Y 
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            +I+   +  +++ A  L  + + +GL+ D  TY+ LI+G+ I G++ EA  +F  M   
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
               N+V YN +I   CK G   +A +L+K M    + P+  +Y  ++    K    +E 
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532

Query: 623 IELHDDMVLSGVSPDNQTYNAI 644
             L + M+ SG+ P     + I
Sbjct: 533 ERLVEKMIDSGIDPSTSILSLI 554



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 230/509 (45%), Gaps = 68/509 (13%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L   E  K    +++ ++ +  Q  +   +     ++   G     + +N  L+ +V  +
Sbjct: 84  LTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSS 143

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
              ++W  + E  S   V +V +F ++I   C+  ++E++  L   + + G  PNVV + 
Sbjct: 144 SFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYT 202

Query: 256 MIINEACQVGDLEFALKLFRKMGV--------------------------------MSGD 283
            +I+  C+ G++E A  LF +MG                                 M  D
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED 262

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V PN  T+NC++N  CK GR + A ++   M + G+ CN+ TY TLI G  R     EA
Sbjct: 263 GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            ++ D+M   G+ PN + YN+ I      G +  AL +  D+  + + P   TY+IL  G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            CR G    A K+  ++ E  +     +Y ILI+   +S+N+  A QL  SM   GL+PD
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           + TY  LI G+C  G +  A +++++M +   +PN VIYN++I G CK+ S   A  LL+
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
                                             EM    +A N   Y  +I  LCK   
Sbjct: 503 ----------------------------------EMEEKELAPNVASYRYMIEVLCKERK 528

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTR 612
            ++A  L++ MI  GI P   +  +L++R
Sbjct: 529 SKEAERLVEKMIDSGIDPS-TSILSLISR 556



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 214/439 (48%), Gaps = 5/439 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           + ++I +  +   L  ++S +  M+ +G  P   CFN ++               F +  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-- 154

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
             +   V+ +  +   +I G C+ G +E + ++   + + G   NV  Y TLIDG  + G
Sbjct: 155 --NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E+A  L  EM K GL+ N   Y   I+ LF  G  +    +   M +  + P+ +TY+
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            +   LC++G  K AF++ +++ E  +  +  +YN LI  LC+   L  A +++  M   
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P++ITY TLIDG+C  G +  A+ +  ++K     P+LV YN +++G C+      A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392

Query: 519 KSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +++  +  G+  + +TY  LI+ +  +  + +A  +   M  +G+  +   Y++LI+ 
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C  G   +A  L K M+     P+ V Y T++  + K  S    ++L  +M    ++P+
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512

Query: 638 NQTYNAIISPLLGEKSAED 656
             +Y  +I  L  E+ +++
Sbjct: 513 VASYRYMIEVLCKERKSKE 531



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 156/335 (46%), Gaps = 2/335 (0%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R Y  +I+ Y +  S   ++   +EMV  G +P +  +N  + ++             ++
Sbjct: 95  RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
              K +  D +++ IL KG C  G ++++F L  ++ E     +   Y  LI+  CK   
Sbjct: 155 NKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  AK L   M   GL+ +  TY  LI+G  K G  +   ++YE M++    PNL  YN 
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273

Query: 505 IINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           ++N LCKD  + DA +   +  +R    + +TYNTLI G     K+ EA  +  +M++ G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I  N + YN LI+  C  G   +A  L + +   G+ P  VTY  LV+ F +        
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           ++  +M   G+ P   TY  +I       + E  +
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 17/272 (6%)

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L  +I   I    FT S L   L  +   K  F+L               Y ++IN   
Sbjct: 61  LLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRL---------------YEVIINSYV 105

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +S +L  +    + M+  G +P    +  L+  +  G +       + N  K +   ++ 
Sbjct: 106 QSQSLNLSISYFNEMVDNGFVPGSNCFNYLLT-FVVGSSSFNQWWSFFNENKSKVVLDVY 164

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            +  +I G C+   ++ +  LL      G   + + Y TLI+G    G+I +A  +F EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
             +G+  N+  Y +LIN L K G  +Q  E+ + M   G+ P+  TY  ++ +  K+   
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           ++  ++ D+M   GVS +  TYN +I  L  E
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 144/276 (52%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF    +M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVY-------------------ENMKKVEK----------------KP 497
            Y + G +  A++ Y                   E++ K++                   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++   K+  +  A+S+  A  +  L  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/409 (31%), Positives = 208/409 (50%), Gaps = 8/409 (1%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           M++ G+ P V+ FN +IN  C  G +  A  L  KM    G  +  + VT+  I+NG CK
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM---VGKGLHIDVVTYGTIVNGMCK 57

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
           +G  + A  +   M +  I  +V  Y+ +ID   + G   +A  L  EM+++G+ PN   
Sbjct: 58  MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 117

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN  I    + G    A  +L DMI++ I PD  T++ L     + G + +A KL +++L
Sbjct: 118 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 177

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D  +YN +I   CK N    AK +   M      PD++T+ T+ID YC+   ++
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVD 233

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
             +Q+   + +     N   YN++I+G C+  +L+AA+ L Q     G+  D IT N L+
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 293

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            G+  N K+ EA  +F  ++   I ++ V YNI+I+ +CK     +A +L   + +HG+ 
Sbjct: 294 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           PD  TY  +++ F    +  +   L   M  +G  PDN TYN +I   L
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 402



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 215/432 (49%), Gaps = 8/432 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           MV  G    V TFN +I  LC E ++ EA +L  +M+  G+  +VV +  I+N  C++GD
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + AL L  KM       + P+ V ++ II+  CK G    A+ +   M++ GI  NV T
Sbjct: 61  TKSALNLLSKM---EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  +IDG+   G   +A RL  +M++R + P+ + +N+ I     EG +  A  +  +M+
Sbjct: 118 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 177

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + I PD  TY+ +  G C++      F     + +     D  ++N +I+  C++  + 
Sbjct: 178 HRCIFPDTVTYNSMIYGFCKH----NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 233

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
              QLL  +  RGL+ +  TY TLI G+C+  N+  A  +++ M      P+ +  N ++
Sbjct: 234 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 293

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            G C++  L+ A  L +  Q   + LD + YN +I+G     K+ EA+ +F  +   G+ 
Sbjct: 294 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   YN++I+  C       A  L   M  +G  PD  TY TL+    K    ++ IEL
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 413

Query: 626 HDDMVLSGVSPD 637
             +M  +G S D
Sbjct: 414 ISEMRSNGFSGD 425



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 196/371 (52%), Gaps = 5/371 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P  +T N +ING C  GRV  A  +   M+  G+  +V TY T+++G  + G ++ AL L
Sbjct: 8   PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 67

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +M +  + P+ V+Y++ I  L  +G    A ++ S+M++K I P+ FTY+ +  G C 
Sbjct: 68  LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 127

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G    A +L   ++E  +  D  ++N LI+   K   L  A++L   M+ R + PD +T
Sbjct: 128 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 187

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y ++I G+CK    + A  +++ M      P++V +N+II+  C+   +D    LL+   
Sbjct: 188 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 243

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           R GL+ +  TYNTLI+G+     +  A  +F EM + G+  + +  NIL+   C+    +
Sbjct: 244 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 303

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A EL +V+ +  I  D V Y  ++    K    +E  +L   + + GV PD QTYN +I
Sbjct: 304 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 363

Query: 646 SPLLGEKSAED 656
           S   G+ +  D
Sbjct: 364 SGFCGKSAISD 374



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 201/408 (49%), Gaps = 9/408 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  +V    ++G T+ A +++ K++       +  ++  +  L K         L+ EM
Sbjct: 47  TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 106

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +  G   NV T+N +I   C   +  +A  L   M++  I P+V+ FN +I+ + + G L
Sbjct: 107 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 166

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A KL  +M       + P++VT+N +I GFCK  R + A+ +   M       +V T+
Sbjct: 167 FEAEKLCDEM---LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 219

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+ID Y R    +E ++L  E+ +RGL+ N   YN+ IH      ++  A  +  +MI 
Sbjct: 220 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 279

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +CPD  T +IL  G C N  +++A +L   +    +  D  +YNI+I+ +CK + +  
Sbjct: 280 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 339

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L  S+ + G+ PD+ TY  +I G+C    I  A  ++  MK    +P+   YN++I 
Sbjct: 340 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 399

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFA 554
           G  K   +D +  L+   +  G   DA T   ++     +G++ ++F+
Sbjct: 400 GCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFS 446


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 211/417 (50%), Gaps = 5/417 (1%)

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           ML+ G  P+VV + +++   C+      A+ +  +M         PN VT+N IING C+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM---RAKGCTPNIVTYNVIINGMCR 234

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GRV+ A+EI   +   G   ++ +Y T++ G       ++   L  EMV +  +PN V 
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           ++  + +    G VE A+ VL  M      P+    +I+   +C+ G V  A+   N + 
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                 D  SY  ++  LC++     AK+LL  M+ +   P+ +T+ T I   C+ G IE
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLIN 541
            A+++ E M +      +V YN++++G C    +D+A  L   +      + ITY TL+ 
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF--NNLPCEPNTITYTTLLT 472

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G     ++  A  + +EM      +N V +N+L++F C+ G  ++A EL+  M+ HG  P
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + +T+ TL+   +K+C+ EE +EL   +V  GVS D  TY++++  L  E   E+ +
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 589



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 237/471 (50%), Gaps = 9/471 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+ +   +  L+ A  +      A +V+ +++ KG + +I  +N  ++ + +   +    
Sbjct: 183 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 242

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           ++   + S G+  ++ ++  V+  LC   + ++   L+  M+     PN V F+M++   
Sbjct: 243 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 302

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A+++ ++   MS     PN+   N +IN  CK GRV+ A +    M   G +
Sbjct: 303 CRGGMVERAIQVLQQ---MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN 359

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  +Y T++ G  R G  E A  L  EMV++   PN V +N+ I  L  +G +E A+ +
Sbjct: 360 PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKL 419

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M +        TY+ L  G C  G V  A +L N +  E    +  +Y  L+  LC 
Sbjct: 420 IELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP---NTITYTTLLTGLCH 476

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  L AA +LL+ MI +    + +T+  L+  +C+ G +E A+++   M +    PNL+ 
Sbjct: 477 AERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLIT 536

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           +N++++G+ KD + + A  LL      G+ LD ITY+++++      +  EA  M   ++
Sbjct: 537 FNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQ 596

Query: 561 NVGIAVNKVG-YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           ++G+   KVG YN ++  LCK     QA +    M+ +G +P+  TY  L+
Sbjct: 597 DMGMR-PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 646



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 228/440 (51%), Gaps = 7/440 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G   +V T+ +++ A+CK     EA+++   M   G  PN+V +N+IIN  C+ G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A ++  ++   S     P+ V++  ++ G C   R +  + +   M+      N  T
Sbjct: 238 VDDAKEILNRL---SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L+  + RGG  E A+++  +M + G  PN  + N  I+ +  +G V+ A   L++M 
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                PD  +Y+ + +GLCR G  + A +L  +++ ++   +  ++N  I  LC+   + 
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L+  M   G    I+TY  L+ G+C  G ++ A++++ N+     +PN + Y +++
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC---EPNTITYTTLL 471

Query: 507 NGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            GLC    LDAA  LL +  Q+   L+A+T+N L++ +   G + EA  + ++M   G  
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N + +N L++ + K    ++A EL+  ++  G+  D +TY+++V   S+    EE I++
Sbjct: 532 PNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQM 591

Query: 626 HDDMVLSGVSPDNQTYNAII 645
              +   G+ P    YN I+
Sbjct: 592 LHAVQDMGMRPKVGMYNKIL 611



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 230/469 (49%), Gaps = 9/469 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +LD       TP +  ++ ++    + G  + A +++ +L   G    I ++   L  L 
Sbjct: 209 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 268

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                     L+ EMV    V N  TF++++   C+   +E A+ +  +M + G  PN  
Sbjct: 269 AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 328

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
             N++IN  C+ G ++ A      MG+   +   P+++++  ++ G C+ GR E A+E+ 
Sbjct: 329 LCNIVINAICKQGRVDDAYDFLNNMGMYGCN---PDTISYTTVLRGLCRAGRWEHAKELL 385

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M++     N  T+ T I    + G  E+A++L + M + G     V YN+ +H    +
Sbjct: 386 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 445

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G V+ AL + +++  +   P+  TY+ L  GLC    +  A +L  +++++    +A ++
Sbjct: 446 GRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTF 502

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N+L+++ C+   +  A +L++ M+  G  P++IT+ TL+DG  K  N E A+++   +  
Sbjct: 503 NVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS 562

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAE 551
                + + Y+S+++ L ++   + A  +L A Q +G+   +  YN ++       +  +
Sbjct: 563 KGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQ 622

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           A   F+ M + G   N+  Y ILI  L   G  ++AR ++  +   G++
Sbjct: 623 AIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 145/303 (47%), Gaps = 4/303 (1%)

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
           C  M++RG  P+ V Y   +  +        A+ VL +M  K   P+  TY+++  G+CR
Sbjct: 175 CSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 234

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V  A ++ N++       D  SY  ++  LC +      K L + M+ +  +P+ +T
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  L+  +C+GG +E A+QV + M +    PN  + N +IN +CK   +D A   L    
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G   D I+Y T++ G    G+   A  +  EM       N+V +N  I  LC+ G  +
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           QA +L+++M  +G     VTY  LV  F      +  +EL +++      P+  TY  ++
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLL 471

Query: 646 SPL 648
           + L
Sbjct: 472 TGL 474



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 194/442 (43%), Gaps = 23/442 (5%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           F   + S   ++  L   RR+DD  +L   ++                    C      F
Sbjct: 253 FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK-----------------CVPNEVTF 295

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
           D LVR   + G  E A  V+Q++   G + +    N  ++ + K   +   +     M  
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G   +  ++  V+  LC+  + E A  L   M++    PN V FN  I   CQ G +E 
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+KL   M    G SV    VT+N +++GFC  GRV+ A E+   +     + N  TY T
Sbjct: 416 AIKLIELMPEY-GCSV--GIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTT 469

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+ G       + A  L  EM+++    N V +N  + +   +G VE A+ +++ M++  
Sbjct: 470 LLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 529

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             P+  T++ L  G+ ++   ++A +L + ++ + +  D  +Y+ +++ L + +    A 
Sbjct: 530 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 589

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           Q+L ++   G+ P +  Y  ++   CK    + A+  +  M      PN   Y  +I GL
Sbjct: 590 QMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649

Query: 510 CKDASLDAAKSLLQASQRIGLL 531
             +  L  A+ +L      G+L
Sbjct: 650 AHEGLLKEARYVLSELYAKGVL 671



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 1/204 (0%)

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
           +A +   S+M+ RG  P ++TY  L++  CK      A+ V + M+     PN+V YN I
Sbjct: 169 SATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVI 228

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           ING+C++  +D AK +L      G   D ++Y T++ G     +  +   +F+EM +   
Sbjct: 229 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 288

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N+V +++L+ F C+ G  ++A ++++ M  HG  P+      ++    K    ++  +
Sbjct: 289 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD 348

Query: 625 LHDDMVLSGVSPDNQTYNAIISPL 648
             ++M + G +PD  +Y  ++  L
Sbjct: 349 FLNNMGMYGCNPDTISYTTVLRGL 372



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 115/266 (43%), Gaps = 25/266 (9%)

Query: 99  AIVHLLVNWRRFDDALLLMGNL-MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACT 157
           A+VH      R D AL L  NL    N+++    L GL  +  +                
Sbjct: 437 ALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERL---------------- 480

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
                + A +++ ++  K   ++   +N  +S   +   +    +L  +M+  G   N+ 
Sbjct: 481 -----DAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 535

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           TFN ++  + K+C  EEAL L + ++  G+  + + ++ +++   +    E A+++   +
Sbjct: 536 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 595

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    + P    +N I+   CK    + A +    M+  G   N  TY  LI+G A  
Sbjct: 596 QDMG---MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 652

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYN 363
           G  +EA  +  E+  +G++  +++ +
Sbjct: 653 GLLKEARYVLSELYAKGVLSKSLLED 678



 Score = 38.9 bits (89), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 33/70 (47%)

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            R     M+  G  P  VTYT L+    K+    E + + D+M   G +P+  TYN II+
Sbjct: 171 TRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIIN 230

Query: 647 PLLGEKSAED 656
            +  E   +D
Sbjct: 231 GMCREGRVDD 240



 Score = 38.9 bits (89), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 44/100 (44%)

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           S M   G   + V Y +L+  +CK   + +A  ++  M   G  P+ VTY  ++    + 
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              ++  E+ + +   G  PD  +Y  ++  L   +  +D
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDD 275


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVV 417



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMP 414



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVY-------------------ENMKKVEK----------------KP 497
            Y + G +  A++ Y                   E++ K++                   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++   K+  +  A+S+  A  +  L  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 244/499 (48%), Gaps = 24/499 (4%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA-NSVSPLEFLEGLLDSYEICKATPAV 148
           F H+  S  ++ HLL+  R    AL L+  L+S     SP   L  L+ +       P  
Sbjct: 119 FRHTPASFLSMSHLLIAHRLSHLALPLLRLLVSRLGRDSPPRLLPLLVSAASTDDPAP-- 176

Query: 149 FDALVRACTQIGATEGAYD-----VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
              LV A  ++ A EG        ++  L+ +G  V + AW++ ++ L  + E    +  
Sbjct: 177 ---LVSAVAKVYADEGLLPDGCSLLLLALR-RGIRVPMPAWSDLMNRLPSVPEA---YAF 229

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y  ++  G       FN+++  + +  KL  A +++  ML+ G+ P VV FN +++  C+
Sbjct: 230 YLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 289

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
             DL  A  L    G+M+   + P+  T+   I G CK GR++ A E+   M + G++ N
Sbjct: 290 ASDLNNANAL---RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPN 346

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
                TLID + + G     L L  EM  RG+  + V YN+ ++      D++ A  ++ 
Sbjct: 347 TVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVE 406

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M    + PD  TY+ L  G C+ G +  A ++  ++ +E +  D  +Y  LI+ L K+ 
Sbjct: 407 EMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAG 466

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               A+++L  M+  GL PD  TY  +ID +CK G+++   +  + M+   K P +V YN
Sbjct: 467 RSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYN 526

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
            ++NG C    +  A  LL A   IG+  + ITYN L++G+  +GK+ +      E+++ 
Sbjct: 527 VVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDT----EELKSA 582

Query: 563 GIAVNKVG-YNILINFLCK 580
              V+  G Y  LIN   K
Sbjct: 583 KGMVSDFGVYTSLINEFVK 601



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 202/425 (47%), Gaps = 42/425 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + EA + Y  +L +G+ P    FNM++ +  + G L  A  +F +M +  G  V P  VT
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEM-LRRG--VQPTVVT 279

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +++G CK   +  A  +R  M KAGI  +V TY   I G  + G  ++A+ + +EM 
Sbjct: 280 FNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC 339

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +RGL PN VV                    L+ +ID H               C+ G V 
Sbjct: 340 ERGLNPNTVV--------------------LTTLIDAH---------------CKEGDVT 364

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
              +L  ++    +  D  +YN L+N  C+  ++ AA  ++  M   GL PD +TY TLI
Sbjct: 365 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 424

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGL 530
           DG CK G ++ A+++ + M       + V Y ++I+GL K   S+DA + L +  +    
Sbjct: 425 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQ 484

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TY  +I+ +  NG +   F    EM+N G     V YN+++N  C  G  + A  L
Sbjct: 485 PDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADML 544

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M+  G+ P+ +TY  L+    K+    +  EL       G+  D   Y ++I+  + 
Sbjct: 545 LNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLINEFVK 601

Query: 651 EKSAE 655
           +KSA+
Sbjct: 602 KKSAK 606



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 164/332 (49%), Gaps = 4/332 (1%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ GI   +  ++ L++   R  S  EA      ++  G+ P    +N  +  +   G +
Sbjct: 202 LRRGIRVPMPAWSDLMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKL 258

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  V  +M+ + + P   T++ L  G+C+   +  A  L   + +  +  D Y+Y   
Sbjct: 259 ASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAF 318

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I  LCK+  +  A ++   M  RGL P+ +   TLID +CK G++   +++   M     
Sbjct: 319 IQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGV 378

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
           K +LV YN+++NG C+   + AA  +++  ++ GL  D +TY TLI+G    G++  A  
Sbjct: 379 KADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME 438

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           M  EM + G+A++ V Y  LI+ L K G    A  ++  M+  G+ PD  TYT ++  F 
Sbjct: 439 MKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFC 498

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           KN   +   +   +M   G +P   TYN +++
Sbjct: 499 KNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMN 530


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       JL++     + 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        J HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  +  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L   M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L       GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 153/294 (52%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L + 
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNX 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 248/522 (47%), Gaps = 24/522 (4%)

Query: 144 ATPA---VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           A PA    F+ L+   ++ G +  +  V+          S     N  ++ + +    R 
Sbjct: 44  ARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRM 103

Query: 201 WKL------YKEMVSCGYVENVNTFNLVIYALCKECKLEEALS-LYYRMLKSGIWPNVVC 253
            +L      +  ++  G+  NV   + ++  LC   +++EA   L  RM + G  P+VV 
Sbjct: 104 GRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVA 163

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +N +IN   + G +E A  LF +M       + PN VT+  +I+G CK   V+ A+ +  
Sbjct: 164 YNTVINGFFREGQVEKAYNLFLEM---MDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQ 220

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            MI  G+  +  TY  LI GY   G  +E +++ +EM   GL P+ + Y   + +L   G
Sbjct: 221 QMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNG 280

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS-- 431
               A      M  K I PD   Y+IL  G    G + +   +H+ +  + MVG+  S  
Sbjct: 281 RCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE---MHSFL--DLMVGNGVSPN 335

Query: 432 ---YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              +NI+     K   +  A  + + M  +GL PD++++G LID  CK G ++ AV  + 
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFN 395

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            M      PN+ +++S++ GLC     + A+ L       G+ +DA+ +NTL+      G
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEG 455

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ EA  +   M  VG+  N + YN L+   C  G   +A +L+ VM+ +G+ P+  TYT
Sbjct: 456 RVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYT 515

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            L+  + K    ++   L  +M++ GV+P   TYN I+  L 
Sbjct: 516 ILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLF 557



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 265/560 (47%), Gaps = 59/560 (10%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           + L+GL D+  + +AT    D L+   ++ G      DV+             A+N  ++
Sbjct: 130 QLLKGLCDAKRVDEAT----DILLLRMSEFGCPP---DVV-------------AYNTVIN 169

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
              +  ++ + + L+ EM+  G   NV T+  VI  LCK   ++ A  ++ +M+  G+ P
Sbjct: 170 GFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKP 229

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +   +N +I+     G  +  +++  +M   S   + P+ +T+  +++  CK GR   A 
Sbjct: 230 DNGTYNCLIHGYLSTGKWKEVVQMLEEM---STHGLEPDCITYALLLDYLCKNGRCREAR 286

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGS------------------------------ 339
               +M + GI  +V  YA L+ GYA  G+                              
Sbjct: 287 LFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAY 346

Query: 340 -----SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                 EEA+ + ++M ++GL P+ V + + I  L   G V+ A+   + MI++ + P+ 
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNI 406

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           F +S L  GLC  G  ++A +L  +VL++ +  DA  +N L+  LC    +  A++L+  
Sbjct: 407 FVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDL 466

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           MI  G+ P++I+Y TL+ G+C  G I+ A ++ + M     KPN   Y  ++ G CK   
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526

Query: 515 LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A SL +     G+   + TYNT+++G F  G+ +EA  ++  M N     +   YNI
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           ++N LCK     +A ++ + +       D VT+  ++    K    E+ ++L   +   G
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646

Query: 634 VSPDNQTYNAIISPLLGEKS 653
           + PD  TY  I   L+ E S
Sbjct: 647 LVPDVVTYRLIAENLIEEGS 666



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 225/502 (44%), Gaps = 79/502 (15%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG---DLEFALKLFRKMGVMSGDSVLPN 288
           L+EAL L+  +L      +V  FN ++    + G     E  + LF +M       V PN
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 289 SVTHNCIINGFCKLGRVEF-----------------------------AEEIRYA----- 314
           + T++ +I  FC++GR+E                              A+ +  A     
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 315 --MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M + G   +V  Y T+I+G+ R G  E+A  L  EM+ +G+ PN V Y + I  L   
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
             V+ A  V   MID+ + PD+ TY+ L  G    G  K+  ++  ++    +  D  +Y
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI------------ 480
            +L++YLCK+     A+    SM  +G+ PD+  Y  L+ GY   G +            
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329

Query: 481 -----------------------EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
                                  E A+ ++  M++    P++V + ++I+ LCK   +D 
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389

Query: 518 AKSLLQASQRI--GLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           A  +LQ +Q I  G+   I  +++L+ G    GK  +A  +F E+ + GI V+ V +N L
Sbjct: 390 A--VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           +  LC  G   +A+ L+ +MI  G+ P+ ++Y TLV         +E  +L D MV +G+
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 635 SPDNQTYNAIISPLLGEKSAED 656
            P+  TY  ++      +  +D
Sbjct: 508 KPNEFTYTILLRGYCKARRVDD 529



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 219/461 (47%), Gaps = 23/461 (4%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMG---NLMSANSVSPLEFLEGLLDSYEICK 143
           ++ F   ++   AI  +L++      AL  M    +LM  N VSP               
Sbjct: 290 DSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSP--------------- 334

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
               +F+ +  A  +    E A  +  K++ +G S  + ++   +  L KL  +      
Sbjct: 335 -NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQ 393

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + +M++ G   N+  F+ ++Y LC   K E+A  L++ +L  GI  + V FN ++   C 
Sbjct: 394 FNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCN 453

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G +  A +L   + +M    V PN +++N ++ G C  GR++ A ++   M+  G+  N
Sbjct: 454 EGRVMEAQRL---IDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY  L+ GY +    ++A  L  EM+ +G+ P    YN+ +H LF  G    A  +  
Sbjct: 511 EFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYL 570

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +MI+     D +TY+I+  GLC+N  V +AFK+  ++  +    D+ ++NI+I  L K  
Sbjct: 571 NMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGG 630

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
               A  L +++   GL+PD++TY  + +   + G++     ++  M+K    PN  + N
Sbjct: 631 RKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLN 690

Query: 504 SIINGLCKDASLD-AAKSLLQASQRIGLLDAITYNTLINGY 543
           +++  L     +  A   L +  ++   L+A T + LI+ Y
Sbjct: 691 ALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLY 731



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 194/395 (49%), Gaps = 7/395 (1%)

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           L+E+  F  L   MV  G   N   FN++  A  K+  +EEA+ ++ +M + G+ P+VV 
Sbjct: 317 LSEMHSFLDL---MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVS 373

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F  +I+  C++G ++ A+  F +M     + V PN    + ++ G C +G+ E AEE+ +
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQM---INEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            ++  GI  +   + TL+      G   EA RL D M++ G+ PN + YN+ +      G
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTG 490

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A  +L  M+   + P+ FTY+IL +G C+   V  A+ L  ++L + +     +YN
Sbjct: 491 RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYN 550

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +++ L ++   + A +L  +MI      DI TY  +++G CK   ++ A +++  +   
Sbjct: 551 TILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
           + + + V +N +I  L K    + A  L       GL+ D +TY  +       G + E 
Sbjct: 611 DPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEF 670

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
             +FS M   G A N    N L+  L   G   +A
Sbjct: 671 DGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 160/374 (42%), Gaps = 45/374 (12%)

Query: 330 LIDGYARGGSS--EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI- 386
           +I   AR GS   +EAL+L DE++      +   +N  +  +   G    +  V+S    
Sbjct: 18  VIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTR 77

Query: 387 -----DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
                   + P+  TYSIL    CR G ++  F     +L+     +    + L+  LC 
Sbjct: 78  MARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCD 137

Query: 442 SNNLAAAKQ-LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +  +  A   LL  M   G  PD++ Y T+I+G+ + G +E A  ++  M      PN+V
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y ++I+GLCK   +D AK + Q     G+  D  TYN LI+GY   GK  E   M  EM
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV--------- 610
              G+  + + Y +L+++LCK G  ++AR     M   GI PD   Y  L+         
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 611 --------------------------TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
                                       ++K    EE + + + M   G+SPD  ++ A+
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377

Query: 645 ISPLLGEKSAEDQV 658
           I  L      +D V
Sbjct: 378 IDALCKLGRVDDAV 391



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 167/379 (44%), Gaps = 20/379 (5%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           A++  L    R DDA+L   N M    V+P  F                VF +LV     
Sbjct: 376 ALIDALCKLGRVDDAVLQF-NQMINEGVTPNIF----------------VFSSLVYGLCT 418

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +G  E A ++  ++  +G  V    +N  + +L     +    +L   M+  G   NV +
Sbjct: 419 VGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVIS 478

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N ++   C   +++EA  L   M+ +G+ PN   + +++   C+   ++ A  LFR+M 
Sbjct: 479 YNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM- 537

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +M G  V P   T+N I++G  + GR   A E+   MI +   C++ TY  +++G  +  
Sbjct: 538 LMKG--VTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNN 595

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             +EA ++   +  +    ++V +N  I  L   G  E A+ + + +    + PD  TY 
Sbjct: 596 FVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYR 655

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           ++ + L   G + +   L + + +     +++  N L+  L    +++ A   L  +  +
Sbjct: 656 LIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEK 715

Query: 459 GLIPDIITYGTLIDGYCKG 477
               +  T   LI  Y +G
Sbjct: 716 NFSLEASTTSMLISLYSRG 734


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 267/539 (49%), Gaps = 9/539 (1%)

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDV 168
           +D  L +    + NS+ P + L+     +EI    P +  +++L+ A  +    + A   
Sbjct: 78  EDVALTVIKAYAKNSM-PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESF 136

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
               +  G S ++  +N  +    +  +  +  +L   M   G+  +V ++  +I +L K
Sbjct: 137 FLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAK 196

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
              + +AL L+  M + G+ P+V C+N++I+   + GD+  A +++ ++  + G SV PN
Sbjct: 197 NGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL--LKGPSVYPN 254

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             ++N +ING CK G+ + + EI + M K     ++ TY+TLI G    G+ + A R+  
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 314

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM + G+ P+ VVYN+ ++     G +E  L  L  +++K  C    +Y+IL +GL  N 
Sbjct: 315 EMAENGVSPDVVVYNTMLNGYLRAGRIEECL-ELWKVMEKEGCRTVVSYNILIRGLFENA 373

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI-VRGLIPDIITY 467
            V +A  +   + E+    D+ +Y +L++ LCK+  L  A  +L      RG + D   Y
Sbjct: 374 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL-DTFAY 432

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            ++I+G C+ G ++    V + M K   KPN  + N++ING  + + L+ A         
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492

Query: 528 IGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            G    + TYNTLING     + +EA+A+  EM + G   N + Y++L+N LC+      
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           A  L    +  G  PD   +  ++     +   E+ ++L+ +M      P+  T+N ++
Sbjct: 553 ALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 247/520 (47%), Gaps = 7/520 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           CK    V   +++A  +    + A D+ Q++ ++ G    I ++N+ L+ L++ N+    
Sbjct: 74  CKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 133

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
              +    + G   N+ T+N++I   C++ + ++A  L   M + G  P+V  +  +IN 
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-G 319
             + G +  ALKLF +M       V P+   +N +I+GF K G +  A EI   ++K   
Sbjct: 194 LAKNGYMSDALKLFDEM---PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  N+ +Y  +I+G  + G  +E+  +   M K     +   Y++ IH L   G+++GA 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +M +  + PD   Y+ +  G  R G +++  +L  +V+E+       SYNILI  L
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW-KVMEKEGCRTVVSYNILIRGL 369

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            ++  +  A  +   +  +    D +TYG L+ G CK G +  A+ + E  +      + 
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             Y+S+INGLC++  LD    +L    + G   +    N +ING+    K+ +A   F  
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M + G     V YN LIN L K   + +A  L+K M+  G  P+ +TY+ L+    +   
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +  + L    +  G  PD + +N II  L      ED +
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 200/404 (49%), Gaps = 5/404 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+      G  +GA  V +++   G S  +  +N  L+  ++   I    +L+K M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G    V ++N++I  L +  K++EA+S++  + +     + + + ++++  C+ G L
Sbjct: 352 EKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL +  +     GD    ++  ++ +ING C+ GR++    +   M K G   N    
Sbjct: 411 NKALSILEEAENGRGDL---DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC 467

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I+G+ R    E+ALR    MV +G  P  V YN+ I+ L        A  ++ +M+ 
Sbjct: 468 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLH 527

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  TYS+L  GLC+   +  A  L  Q LE+    D   +NI+I+ LC S  +  
Sbjct: 528 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 587

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A QL S M  R  +P+++T+ TL++G+ K  + E A ++++++ +   +P+++ YN  + 
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLK 647

Query: 508 GLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
           GLC    + DA   L  A  R  L  AIT+N L+     NG + 
Sbjct: 648 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGALT 691



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 124/247 (50%), Gaps = 5/247 (2%)

Query: 129 LEFLEGLLD--SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L+ + G+LD  +   CK  P V +A++    +    E A      +  KG   ++  +N 
Sbjct: 445 LDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNT 504

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            ++ L K       + L KEM+  G+  N+ T++L++  LC+  KL+ AL+L+ + L+ G
Sbjct: 505 LINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG 564

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P+V   N+II+  C  G +E AL+L+ +   M     +PN VTHN ++ GF K+   E
Sbjct: 565 FKPDVKMHNIIIHGLCSSGKVEDALQLYSE---MKQRKCVPNLVTHNTLMEGFYKVRDFE 621

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A +I   +++ G   ++ +Y   + G        +A+   ++ V RG++P  + +N  +
Sbjct: 622 RASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681

Query: 367 HWLFAEG 373
             +   G
Sbjct: 682 RAVLDNG 688


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 264/571 (46%), Gaps = 57/571 (9%)

Query: 133 EGLLDSYEICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           E +L   + C+   AV ++ ++    + G  + A  ++  ++  G    ++ +N  +  L
Sbjct: 250 ESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            KL    R + L K M       +  ++N +I+    E K+  A+ ++ +ML+  + P+V
Sbjct: 310 CKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSV 369

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGV-----------------MSGDSVLPNSVTHNC 294
             +  +I+  C+ G  + A ++  +M +                 M  D + P+ +T++ 
Sbjct: 370 ATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSA 429

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +ING CK+G +   +EI   M K+G+  N   Y TL+  + + G ++EAL+   ++ + G
Sbjct: 430 LINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSG 489

Query: 355 LMPNNVVYNSTIHWLFAE-----------------------------------GDVEGAL 379
           L+ N+V++N+ +   + E                                   G+V  A 
Sbjct: 490 LVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAF 549

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +M+     PD  TY  L +GLC+ G + QA +    +LE+    D  + N L+  +
Sbjct: 550 SVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGI 609

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   L  A  L   M+ R ++PD  TY  L+DG+CK G I  A+ + + M +    P+ 
Sbjct: 610 CKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDT 669

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQ-RIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
           + Y  ++NGL  +  + AA  + Q    + GL  D I YN+++NGY   G+I E   +  
Sbjct: 670 IAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMR 729

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            M    +  +   YNIL++   K G   +   L + M+  GI PD VTY  L+    +  
Sbjct: 730 NMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYG 789

Query: 618 SPEEVIELHDDMVL--SGVSPDNQTYNAIIS 646
             E  ++  + MVL  SG+ P +  Y A+I+
Sbjct: 790 LIEIAVKFLEKMVLEESGLQPKHTHYIALIN 820



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 233/467 (49%), Gaps = 19/467 (4%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL------SHLVKLNEIGRF 200
           A F+ ++ +  Q G    A+ V   +   G    I  + + L       HLV+  E    
Sbjct: 530 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKE---- 585

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + +Y    +C   E   T N ++  +CK   L+EAL L  +M+   I P+   + ++++ 
Sbjct: 586 FMVYLLEKACAIDEK--TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 643

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI-KAG 319
            C+ G +  AL L +   +M    ++P+++ + C++NG    G+V+ A  +   +I K G
Sbjct: 644 FCKRGKIVPALILLQ---MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 700

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +   Y ++++GY +GG   E  RL   M +  + P++  YN  +H    +G +   L
Sbjct: 701 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 760

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK-LHNQVLEEHMVGDAYSYNI-LIN 437
           ++  DM+ + I PD+ TY +L  GLC  G ++ A K L   VLEE  +   +++ I LIN
Sbjct: 761 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALIN 820

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             C+  ++  A +L   M   G++P  +   +++ G CK G +E A+ V+ ++ +    P
Sbjct: 821 AKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVP 880

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
            +  + ++++GLCK+  +D A  L Q  +  GL +D +TYN LI G      I +A  ++
Sbjct: 881 TIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLY 940

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
            EM++ G+  N   Y  L   +   G  Q   +L+K +   GI+P Y
Sbjct: 941 EEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 987



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 159/627 (25%), Positives = 277/627 (44%), Gaps = 64/627 (10%)

Query: 38  AICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESS 97
           +I   L  ++W+ L QMA         +     +   KLAL     + + +         
Sbjct: 60  SIITVLAMQRWETLSQMA--------YKSGKLDKAHGKLALRMLDSIVQQSGLDRITHIY 111

Query: 98  CAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV-FDALVRAC 156
           C  VH+LV  +    A+ ++ +L +    S       LL +   C  T     D LV A 
Sbjct: 112 CMAVHILVQAQMPSQAMSVLRHL-ALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAY 170

Query: 157 TQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
            + G    A   I  +   G   S+ + NN L+ LV +N+    W   KE +   +  +V
Sbjct: 171 VKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDV 230

Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
            T N+V+ +LC + KL +A S+  +M K+   PN V +N I+N   + G  + AL++   
Sbjct: 231 TTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILDD 289

Query: 277 M---GV-----------------------------MSGDSVLPNSVTHNCIINGFCKLGR 304
           M   G+                             M   ++ P+  ++N +I+GF   G+
Sbjct: 290 MEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGK 349

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE--------------- 349
           +  A  I   M++  +  +V TY  LIDGY R G ++EA R+  E               
Sbjct: 350 INLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAK 409

Query: 350 -----MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
                M+  G+ P+ + Y++ I+ +   G +     +LS M    + P++  Y+ L    
Sbjct: 410 QILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYF 469

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C+ G  K+A K    +    +V ++  +N L+    +   +A A+Q    M    +  D+
Sbjct: 470 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDV 529

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS-LLQ 523
            ++  +ID YC+ GN+  A  VY+NM +    P++  Y S++ GLC+   L  AK  ++ 
Sbjct: 530 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVY 589

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             ++   +D  T NTL+ G   +G + EA  +  +M    I  +   Y IL++  CK G 
Sbjct: 590 LLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGK 649

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLV 610
              A  L+++M+  G++PD + YT L+
Sbjct: 650 IVPALILLQMMLEKGLVPDTIAYTCLL 676



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 260/584 (44%), Gaps = 92/584 (15%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K + A + AL+    + G T+ A  V+ ++++ G               V+  E+ +  +
Sbjct: 366 KPSVATYTALIDGYCRNGRTDEARRVLYEMQITG---------------VRPREVSKAKQ 410

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + K M++ G   +V T++ +I  +CK   + E   +  RM KSG+ PN V +  ++   C
Sbjct: 411 ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 470

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G  + ALK F  +   SG  ++ NSV HN ++  F + G +  AE+ +  M +  I  
Sbjct: 471 KAGHAKEALKYFVDI-YRSG--LVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISF 527

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI-------HWLFAE--- 372
           +V ++  +ID Y + G+  EA  + D MV+ G  P+   Y S +       H + A+   
Sbjct: 528 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 587

Query: 373 -------------------------GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
                                    G ++ AL +   M+ ++I PD +TY+IL  G C+ 
Sbjct: 588 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 647

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR-GLIPDIIT 466
           G +  A  L   +LE+ +V D  +Y  L+N L     + AA  +   +I + GL  D I 
Sbjct: 648 GKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 707

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y ++++GY KGG I    ++  NM + E  P+   YN +++G  K   L     L +   
Sbjct: 708 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 767

Query: 527 RIGLL-DAITYNTLINGY--------------------------------FIN-----GK 548
           + G+  D +TY  LI G                                  IN     G 
Sbjct: 768 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGD 827

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I  AF +  +M+ +G+  ++V  + ++  LCK G  ++A  +   ++  G++P   T+TT
Sbjct: 828 IDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTT 887

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           L+    K    ++   L   M   G+  D  TYN +I+ L  +K
Sbjct: 888 LMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKK 931



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 241/497 (48%), Gaps = 7/497 (1%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A   + +AL+ +  + G    A    Q +     S  + ++N  +    +   +   + +
Sbjct: 492 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 551

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y  MV  G+  ++ T+  ++  LC+   L +A      +L+     +    N ++   C+
Sbjct: 552 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 611

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G L+ AL L  KM      ++LP++ T+  +++GFCK G++  A  +   M++ G+  +
Sbjct: 612 HGTLDEALDLCEKMVT---RNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPD 668

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMV-KRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
              Y  L++G    G  + A  +  E++ K GL  + + YNS ++     G +     ++
Sbjct: 669 TIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLM 728

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M +  + P   +Y+IL  G  + G + +   L+  +++E +  D  +Y +LI  LC+ 
Sbjct: 729 RNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEY 788

Query: 443 NNLAAAKQLLSSMIVR--GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             +  A + L  M++   GL P    Y  LI+  C+ G+I+GA ++ E+MK +   P+ V
Sbjct: 789 GLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEV 848

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEM 559
             +SI+ GLCK   ++ A  +  +  R G++  I T+ TL++G     KI +AF +   M
Sbjct: 849 AESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLM 908

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
            + G+ V+ V YN+LI  LC   C   A +L + M   G++P+  TY TL        + 
Sbjct: 909 ESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTM 968

Query: 620 EEVIELHDDMVLSGVSP 636
           ++  +L  D+   G+ P
Sbjct: 969 QDGEKLLKDIEDRGIVP 985



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 218/450 (48%), Gaps = 15/450 (3%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL----EFA 270
           +V +FN +I + C+   + EA S+Y  M++ G  P++  +  ++   CQ G L    EF 
Sbjct: 528 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 587

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           + L  K   +       +  T N ++ G CK G ++ A ++   M+   I  +  TY  L
Sbjct: 588 VYLLEKACAI-------DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 640

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH- 389
           +DG+ + G    AL L   M+++GL+P+ + Y   ++ L  EG V+ A ++  ++I K  
Sbjct: 641 LDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 700

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  D   Y+ +  G  + G + +  +L   + E  +   + SYNIL++   K   L+   
Sbjct: 701 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 760

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIIN 507
            L   M+  G+ PD +TY  LI G C+ G IE AV+  E M   E   +P    Y ++IN
Sbjct: 761 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALIN 820

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             C+   +D A  L +  + +G++ + +  ++++ G    GK+ EA  +FS +   G+  
Sbjct: 821 AKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVP 880

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
               +  L++ LCK      A  L ++M   G+  D VTY  L+T         + ++L+
Sbjct: 881 TIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLY 940

Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++M   G+ P+  TY  +   +    + +D
Sbjct: 941 EEMKSKGLLPNITTYITLTGAMYATGTMQD 970



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 195/422 (46%), Gaps = 8/422 (1%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           LL G     + V   EF+  LL+  + C       + L+    + G  + A D+ +K+  
Sbjct: 570 LLRGLCQGGHLVQAKEFMVYLLE--KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 627

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +      + +   L    K  +I     L + M+  G V +   +  ++  L  E +++ 
Sbjct: 628 RNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKA 687

Query: 235 ALSLYYRML-KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           A  ++  ++ K G++ + + +N ++N   + G +    +L R M     + V P+S ++N
Sbjct: 688 ASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNM---HENEVYPSSASYN 744

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV-- 351
            +++G+ K G++     +   M+K GI  +  TY  LI G    G  E A++  ++MV  
Sbjct: 745 ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 804

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + GL P +  Y + I+     GD++GA  +  DM    + P     S + +GLC+ G V+
Sbjct: 805 ESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 864

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  + + ++   MV    ++  L++ LCK   +  A  L   M   GL  D++TY  LI
Sbjct: 865 EAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLI 924

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G C    I  A+ +YE MK     PN+  Y ++   +    ++   + LL+  +  G++
Sbjct: 925 TGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIV 984

Query: 532 DA 533
            +
Sbjct: 985 PS 986



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 71/143 (49%)

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           N ++N LC    L  A+S+LQ  +   L +A+TYNT++N Y   G+   A  +  +M   
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKN 293

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           GI  +   YNI+I+ LCK     +A  L+K M    + PD  +Y TL+  F         
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLA 353

Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
           I + + M+   + P   TY A+I
Sbjct: 354 IYIFNQMLRQSLKPSVATYTALI 376


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 250/519 (48%), Gaps = 24/519 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++ +L +  R+DD   + G ++       +     LLDS+                  + 
Sbjct: 208 VLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSF-----------------LKE 250

Query: 160 GATEGAYDVIQKLKVKGHSVSIH--AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           G  + A  ++++++ +G   S++   +N  +S L +   +    KL   M       +  
Sbjct: 251 GRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSF- 309

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N +I AL +   + +A +L   M   GI P VV +N II+   +    E A   F +M
Sbjct: 310 TYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM 369

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    +LP+ +T+N ++N +CK G ++ A  +   + +AG+   V TY TLIDGY R 
Sbjct: 370 RAMG---LLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G   EA RL +EMV++G  P+   Y   ++      ++  A     +M+ K + PD F Y
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +              AF+L   ++ + +  D  +YN++I+ LCK+ NL  AK+L + M+ 
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
            GL PD ITY  LI  +C+ G +  A ++   M     +P++V Y  +++  C+  +L +
Sbjct: 547 DGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYS 606

Query: 518 AKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A    +    +G+  + ITYN LI+   + G+   AF  F EM   G+A NK  Y +LI+
Sbjct: 607 AYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLID 666

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             C+ G +  A  L   M  +GI PDY T+  L   F +
Sbjct: 667 GNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDE 705



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 249/498 (50%), Gaps = 12/498 (2%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS-- 209
           ++R   +       Y  + +L+V+    +I  +N  L   +K         L KEM +  
Sbjct: 211 VLRDAARWDDVRAVYGEMLQLRVEP---TIVTYNTLLDSFLKEGRKDEASMLLKEMETQG 267

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G+  N  TFN+VI  L +E  LE A+ L   M  S    +   +N +I    + G +  
Sbjct: 268 GGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFT-YNPLITALLERGFVRK 326

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYA 328
           A  L  +M     + ++P  VT+N II+G  K  + E A ++++A ++A G+  +V TY 
Sbjct: 327 AEALQMEM---ENEGIMPTVVTYNAIIHGLLKCEQAE-AAQVKFAEMRAMGLLPDVITYN 382

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +L++ Y + G+ +EAL L  ++ + GL P  + YN+ I      GD+  A  +  +M+++
Sbjct: 383 SLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQ 442

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD  TY+IL  G  +   +  A +  +++L + +  D ++YN  I      ++   A
Sbjct: 443 GCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMA 502

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            QL   M+++G+ PD +TY  +IDG CK GN++ A ++   M     +P+ + Y  +I+ 
Sbjct: 503 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHA 562

Query: 509 LCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C+   L  A+ LL      GL  + +TY  L++     G +  A+  F +M +VGI  N
Sbjct: 563 HCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPN 622

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
           ++ YN+LI+ LC  G    A      M+  G+ P+  TYT L+    +  +  + I L+ 
Sbjct: 623 EITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYF 682

Query: 628 DMVLSGVSPDNQTYNAII 645
           +M  +G+ PD  T+NA+ 
Sbjct: 683 EMHQNGIPPDYCTHNALF 700



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 205/443 (46%), Gaps = 29/443 (6%)

Query: 51  LEQMAPSLT-NSLVNRVVSE--FRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNW 107
           L + A S T N L+  ++     RK+  L +E      EN     ++ +  AI+H L+  
Sbjct: 302 LSKKASSFTYNPLITALLERGFVRKAEALQMEM-----ENEGIMPTVVTYNAIIHGLLKC 356

Query: 108 RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYD 167
            + + A +    + +   +  +     LL+ Y  CKA               G  + A  
Sbjct: 357 EQAEAAQVKFAEMRAMGLLPDVITYNSLLNRY--CKA---------------GNLKEALW 399

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           ++  L+  G + ++  +N  +    +L ++    +L +EMV  G   +V T+ +++    
Sbjct: 400 LLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSR 459

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K   L  A   +  ML  G+ P+   +N  I     +     A +L R++ ++ G  + P
Sbjct: 460 KVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQL-REVMMLKG--IYP 516

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++VT+N II+G CK G ++ A+ ++  M+  G+  +  TY  LI  +   G   EA +L 
Sbjct: 517 DTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLL 576

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           + MV  GL P+ V Y   +H     G++  A      M+D  I P+  TY++L   LC  
Sbjct: 577 NGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMT 636

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G    AF+  +++LE  +  + Y+Y +LI+  C+  N A A +L   M   G+ PD  T+
Sbjct: 637 GRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTH 696

Query: 468 GTLIDGYCKGGNIEGAVQVYENM 490
             L  G+   G++  A++  EN+
Sbjct: 697 NALFKGF-DEGHMYHAIEYMENI 718



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 154/345 (44%), Gaps = 39/345 (11%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAE 372
           M++  ++  + TY TL+D + + G  +EA  L  EM  +G     N+V +N  I +L  E
Sbjct: 228 MLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLARE 287

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G +E A+ ++  M                             +L  +         +++Y
Sbjct: 288 GHLENAVKLVDSM-----------------------------RLSKK-------ASSFTY 311

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N LI  L +   +  A+ L   M   G++P ++TY  +I G  K    E A   +  M+ 
Sbjct: 312 NPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRA 371

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAE 551
           +   P+++ YNS++N  CK  +L  A  LL   +R GL   + TYNTLI+GY   G +AE
Sbjct: 372 MGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAE 431

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +  EM   G   +   Y IL+N   K      ARE    M+  G+ PD   Y T + 
Sbjct: 432 ARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRIC 491

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                 S     +L + M+L G+ PD  TYN II  L    + +D
Sbjct: 492 AELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKD 536


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 166/660 (25%), Positives = 305/660 (46%), Gaps = 42/660 (6%)

Query: 15  PLSRAFHVGKQFANPSTEDI-VFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKS 73
           P    FH+ ++ A  S   +     +   LR R         P  + S    V+S F ++
Sbjct: 46  PQPLLFHLLRRLATSSPSHLPCLLNLLPRLRHR---------PRFSESAALVVLSAFSRA 96

Query: 74  --PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA---NSVSP 128
             P  AL+ +  +      +  + S  A++   V  RRF DA     +L        ++P
Sbjct: 97  IMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAP 156

Query: 129 -----------------LEFLEGLLDSYEICKATPA--VFDALVRACTQIGATEGAYDVI 169
                            L+    L DS    +  P    +  L+    +    + A D++
Sbjct: 157 NLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLL 216

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFNLVIYALCK 228
            ++   G    +  +N  L    K  E  +  +++ ++V   G   N+ T+N+++  LCK
Sbjct: 217 DEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             + +E   ++ RM+ + + P+V+ + ++I+  C+ GD++ A +++ ++ + +G  ++ +
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEI-IKTG--LVID 333

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           +  +N ++ GFC+ GRV+ A +   +   AG+  N+RTY  +I G    G  +EA+ L D
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWD 392

Query: 349 EMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            + K    +P+ V + + IH L   G    A  +  +        D F+YS +  GLC  
Sbjct: 393 LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNV 452

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +  A K++ ++ ++    +++ YN LI+  C+    + A ++ S M   G  P +ITY
Sbjct: 453 GRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG CK    + A  V   M +    P++  Y S+I GL  D  +D A S+ +    
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY 572

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR-NVGIAVNKVGYNILINFLCKFGCYQ 585
            GL +D + +N LI+G    GK+ EA  +FS+M+       N V YN L++ L + G   
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L   +   G+ PD ++Y T +          E I+L D+++  G+ P   T+N ++
Sbjct: 633 KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 269/569 (47%), Gaps = 19/569 (3%)

Query: 95  ESSCAIVHL--LVNWRR-FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA 151
           +++ A+ HL  LV+ R  F     L+ +L+   + S    L  LL+     +  P   ++
Sbjct: 25  DATAALAHLELLVSTRPAFPPPQPLLFHLLRRLATSSPSHLPCLLNLLPRLRHRPRFSES 84

Query: 152 ----LVRACTQIGATEGAYDVIQKLK-VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
               ++ A ++    + A D  + L  + G +  I + N  L   V+          +  
Sbjct: 85  AALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFAS 144

Query: 207 MVSCGY----VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +    +      N+ T+N+V+ +LC    L+ A++L+  + +  + P+ + ++ ++    
Sbjct: 145 LSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLA 204

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK-AGID 321
           +   L+ AL L  +M       V P+ V +N ++ G  K G  E    +   ++K  G  
Sbjct: 205 KQDRLDHALDLLDEM---PRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR 261

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N+ TY  ++DG  + G  +E   + + MV   L P+ + Y   IH L   GDV+GA  V
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
            S++I   +  D   Y+ L KG C+ G V++A+K  +      +  +  +YNI+I  L  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFD 380

Query: 442 SNNLAAAKQLLSSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           S  +  A +L   +      IPD +T+GTLI G C+ G    A  ++E  +   K+ ++ 
Sbjct: 381 SGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVF 440

Query: 501 IYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y+S+INGLC    L DA K   +  +     ++  YN LI+G+    + ++A  ++S+M
Sbjct: 441 SYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKM 500

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
            + G +   + YN LI+ LCK   YQ+A  + + M+ +G  PD  TY +L+     +   
Sbjct: 501 ADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKI 560

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           ++ + +   ++  G+  D   +N +I  L
Sbjct: 561 DDALSIWKQILYKGLKVDVMMHNILIHGL 589



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 229/450 (50%), Gaps = 11/450 (2%)

Query: 216 VNTFNLVIYALCKECKLEEA----LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           + + N ++ A  +  +  +A     SL +      I PN+  +N+++   C  GDL+ A+
Sbjct: 119 IRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAV 178

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            LF  +       V P+ +T++ ++ G  K  R++ A ++   M ++G+  +V  Y  L+
Sbjct: 179 TLFDSL---RRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALL 235

Query: 332 DGYARGGSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
            G  + G  E+ +R+ D++VK  G  PN   YN  +  L   G  +    V   M+  ++
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNL 295

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  TY IL  GLCR+G V  A ++++++++  +V DA  YN L+   C++  +  A +
Sbjct: 296 QPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK 355

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK-VEKKPNLVIYNSIINGL 509
              S    GL  ++ TY  +I G    G ++ A+++++ ++K V   P+ V + ++I+GL
Sbjct: 356 FWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414

Query: 510 CKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C++   + A ++ + ++  G  LD  +Y+++ING    G++ +A  ++ +M   G   N 
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             YN LI+  C+      A  +   M  +G  P  +TY TL+    K    +E   +  +
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           MV +G +PD  TY ++I  L  +K  +D +
Sbjct: 535 MVENGFTPDITTYGSLIRGLFSDKKIDDAL 564



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 226/490 (46%), Gaps = 41/490 (8%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHL 191
           LLD        P V  ++AL+  C + G  E    V  KL K  G   ++  +N  L  L
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K        ++++ MV+     +V T+ ++I+ LC+   ++ A  +Y  ++K+G+  + 
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDA 334

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMG-------------------------------VM 280
             +N ++   CQ G ++ A K +   G                               ++
Sbjct: 335 AMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 281 SGD-SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
             D + +P++VT   +I+G C+ G    A  I      +G   +V +Y+++I+G    G 
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A+++ ++M K G  PN+ +YN+ I           A+ + S M D    P   TY+ 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC+    ++A  +  +++E     D  +Y  LI  L     +  A  +   ++ +G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK---PNLVIYNSIINGLCKDASLD 516
           L  D++ +  LI G C  G ++ A+ V+ +MK  EKK   PNLV YN++++GL +   +D
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMK--EKKNCPPNLVTYNTLMDGLYETGYID 632

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A +L  +    GL  D I+YNT I G     +I E   +  E+ + GI    + +NIL+
Sbjct: 633 KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692

Query: 576 NFLCKFGCYQ 585
             + K+G  Q
Sbjct: 693 RAVIKYGPIQ 702



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 39/351 (11%)

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           L  LL+    C      F  L+    Q G    A+ + ++ +V G  + + ++++ ++ L
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
             +  +    K+Y++M   G   N + +N +I   C+  +  +A+ +Y +M  +G  P V
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + +N +I                                      +G CK  + + A  +
Sbjct: 510 ITYNTLI--------------------------------------DGLCKAEKYQEASSV 531

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M++ G   ++ TY +LI G       ++AL +  +++ +GL  + +++N  IH L +
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591

Query: 372 EGDVEGALFVLSDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            G V+ AL V SDM +K  CP +  TY+ L  GL   G + +A  L   + E+ +  D  
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           SYN  I  LC  + +    QLL  ++ RG+IP +IT+  L+    K G I+
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 216/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   + F +A  L+  ++S     S       ++++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HLVKL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE  +  A S++  + K G+ P+VV +N ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL    KL      M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLNEGFKL---KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +G +  A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A++++  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVV 417



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 155/290 (53%), Gaps = 1/290 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    EGD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + FKL + +    +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 185 GDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTF 244

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A++VY+ M      P+L+ YN++I GLCK  +L+ A  L+     
Sbjct: 245 TTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSM 304

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 305 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 364

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           A ++M+ M+  G+ PD  TYT ++  F K     +  +L  +M   G +P
Sbjct: 365 AEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 414



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 151/278 (54%), Gaps = 1/278 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G   E  +L   M  
Sbjct: 140 NILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK   L  A  L+  M ++GL PD ITY TLID
Sbjct: 260 AMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +++     GL  
Sbjct: 320 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           D  TY  +IN +   G + +   +  EM+  G A + V
Sbjct: 380 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVV 417



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 154/303 (50%), Gaps = 11/303 (3%)

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
           F EEI    ++ G   ++  +  L+  + + G    A  + D + K GL P+ V YN+ +
Sbjct: 123 FYEEI----LECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLM 178

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +     GD+     + S M    + PD +TYS+L  GLC+   +  A +L  ++L + +V
Sbjct: 179 NGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLV 238

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  ++  LI+  CK+  +  A ++   M+ + L+PD+ITY TLI G CK G +  A  +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDL 298

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLING 542
            + M     KP+ + Y ++I+G CK+  LD A    K ++Q + R   LD + Y  LI+G
Sbjct: 299 MDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR---LDDVAYTALISG 355

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G+  +A  M  EM + G+  +   Y ++IN  CK G   +  +L+K M   G  P 
Sbjct: 356 LCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 415

Query: 603 YVT 605
            VT
Sbjct: 416 VVT 418



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 131/244 (53%), Gaps = 1/244 (0%)

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL++G
Sbjct: 121 WAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNG 180

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           Y + G++    ++   M     +P++  Y+ +INGLCK++ +D A  L +     GL+ +
Sbjct: 181 YIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPN 240

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G   QA +LM 
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMD 300

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            M + G+ PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L  E 
Sbjct: 301 EMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG 360

Query: 653 SAED 656
            + D
Sbjct: 361 RSVD 364



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     SYN L+N   +  +L    +L S+
Sbjct: 137 YFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A +++E M      PN V + ++I+G CK+  
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +      LL D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 VDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G    A E  K MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFG 376

Query: 634 VSPDNQTYNAIIS 646
           + PD  TY  II+
Sbjct: 377 LKPDTGTYTMIIN 389


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 215/415 (51%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +   + V        L HL+KL      W  YK
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ C Y  ++  FN+++   CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A ++   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ +G  P+ + YN+ I+ L  +GD+  A  +  +M
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  SY  LI+ LCK    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  ++  +CK G+++   ++ + M++    P ++
Sbjct: 363 VDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVI 417



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +   + K G+  +V ++ TL++GY + G  +E  RL   M  
Sbjct: 140 NILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D+ + P+  T++ L  G C+NG +  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L +    D  +YN LI  LCK  +L  AK L   M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M K   + + V Y ++I+GLCK+     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +++ +  NG +     +  EM+  G
Sbjct: 380 DTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 140/266 (52%), Gaps = 1/266 (0%)

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           EG++  A  V   +    + P   +++ L  G  + G + + F+L + +    +  D Y+
Sbjct: 149 EGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYT 208

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y++LIN LCK + +  A +L   M+ RGL+P+ +T+ TLIDG+CK G ++ A+++Y+ M 
Sbjct: 209 YSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQML 268

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
                P+ + YN++I GLCK   L  AK L       GL  D ITY TLI+G    G + 
Sbjct: 269 SQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            AF     M    I ++ V Y  LI+ LCK G    A ++++ M+  G+ PD  TYT ++
Sbjct: 329 TAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVM 388

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSP 636
             F KN   +   +L  +M   G  P
Sbjct: 389 HEFCKNGDVKMGSKLLKEMQRDGHVP 414



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 150/280 (53%), Gaps = 7/280 (2%)

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+D + + G    A  + D + K GL P+ V +N+ ++     GD++    + S M    
Sbjct: 142 LMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASG 201

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           + PD +TYS+L  GLC+   + +A KL +++L+  +V +  ++  LI+  CK+  L  A 
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAM 261

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           ++   M+ +G  PD ITY TLI G CK G++  A  + + M     KP+ + Y ++I+G 
Sbjct: 262 EIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGS 321

Query: 510 CKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           CK+  L+ A    K +++ + R   LD ++Y  LI+G    G+  +A  M  EM +VG+ 
Sbjct: 322 CKEGDLETAFEYRKRMIKENIR---LDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLK 378

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            +   Y I+++  CK G  +   +L+K M   G +P  +T
Sbjct: 379 PDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +   +   GL P ++++ TL
Sbjct: 118 KLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NGK+  A  ++ +M + G + + + YN LI  LCK G   QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M + G+ PD +TYTTL+    K    E   E    M+   +  D+ +Y A+IS L 
Sbjct: 298 LXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 KEGRSVD 364



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 127/252 (50%), Gaps = 1/252 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   K  +L    +L S+
Sbjct: 137 YFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGK 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD A  + +     G   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y  
Sbjct: 257 LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A E  K MI   I  D V+YT L++   K     +  ++  +M+  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAII 645
           + PD  TY  ++
Sbjct: 377 LKPDTGTYTIVM 388


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++ CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL      FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLNEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+    +++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL  +I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 417



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 36/314 (11%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY + G   E  RL + M  
Sbjct: 140 NILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++  S+DA K            
Sbjct: 320 GSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEK------------ 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                  M  EM +VG+ +    Y ++IN  CK G      +LM
Sbjct: 368 -----------------------MLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLM 404

Query: 592 KVMILHGIIPDYVT 605
           K M   G +P  VT
Sbjct: 405 KEMQRDGYVPSVVT 418



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            +  TYT ++  F K        +L  +M   G  P
Sbjct: 379 LEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G++    ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K+MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+  +  TY  II+
Sbjct: 376 GLKLEIGTYTMIIN 389



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQ-------------------VYENMKKVEK----------------KP 497
            Y + G +  A++                   V E++ K++                   
Sbjct: 75  AYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++  CK+  +  A+S+  A  + GL  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 262/552 (47%), Gaps = 12/552 (2%)

Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQI 159
           H LV  R F   ++    ++   SV  +E    LL     C   P V  F  L+    + 
Sbjct: 240 HRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + A+D+ + ++ +G    + A++  +    K   +G   KL+ + +  G   +V  F
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           +  I    K   L  A  +Y RML  GI PNVV + ++I   CQ G +  A  ++   G 
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY---GQ 416

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           +    + P+ VT++ +I+GFCK G +     +   MIK G   +V  Y  L+DG ++ G 
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY-- 397
              A+R   +M+ + +  N VV+NS I         + AL V   M    I PD  T+  
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536

Query: 398 ----SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
               SI+    C++       +L + +    +  D    N++I+ L K + +  A +  +
Sbjct: 537 VMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 596

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
           ++I   + PDI+TY T+I GYC    ++ A +++E +K     PN V    +I+ LCK+ 
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 656

Query: 514 SLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  +    +++    +A+TY  L++ +  +  I  +F +F EM+  GI+ + V Y+
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           I+I+ LCK G   +A  +    I   ++PD V Y  L+  + K     E   L++ M+ +
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776

Query: 633 GVSPDNQTYNAI 644
           GV PD+    A+
Sbjct: 777 GVKPDDLLQRAL 788



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 165/673 (24%), Positives = 284/673 (42%), Gaps = 97/673 (14%)

Query: 57  SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
           +L  +  N V+      P  AL+++ W       S    S   I H+L+    FD A  +
Sbjct: 66  NLQRNETNLVLLSLESEPNSALKYFRWA----EISGKDPSFYTIAHVLIRNGMFDVADKV 121

Query: 117 MGNLMSANSVSPLEFLEGLLD---SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
              +++ N       L  + D     ++CK        L+  C + G  + A ++     
Sbjct: 122 FDEMIT-NRGKDFNVLGSIRDRSLDADVCKF-------LMECCCRYGMVDKALEIFVYST 173

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY-VENVNTFNLVIYALCKECKL 232
             G  +   +    L+ L+  + +      + ++   G     V+    V+ AL  + ++
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEV 233

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
            +AL  +  +++ G    +V  N ++ +   V  +E A +L   + ++      PN VT 
Sbjct: 234 TKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRL---LSLVLDCGPAPNVVTF 289

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             +INGFCK G ++ A ++   M + GI+ ++  Y+TLIDGY + G      +L  + + 
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +G+  + VV++STI      GD+  A  V   M+ + I P+  TY+IL KGLC++G + +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG---- 468
           AF ++ Q+L+  M     +Y+ LI+  CK  NL +   L   MI  G  PD++ YG    
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 469 -------------------------------TLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
                                          +LIDG+C+    + A++V+  M     KP
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 498 NLVIYNSII------NGLCKDASLDAAKSLLQASQR-------------IGLL------- 531
           ++  + +++      +  CK         L    QR             I LL       
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589

Query: 532 ----------------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
                           D +TYNT+I GY    ++ EA  +F  ++      N V   ILI
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           + LCK      A  +  +M   G  P+ VTY  L+  FSK+   E   +L ++M   G+S
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709

Query: 636 PDNQTYNAIISPL 648
           P   +Y+ II  L
Sbjct: 710 PSIVSYSIIIDGL 722


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 239/481 (49%), Gaps = 26/481 (5%)

Query: 177 HSVSIHAWNNFLSHLVKL-NEIGRFWKLYKEMVSCGYVENVNTFNLVI------------ 223
            + SI  +N  L++L+K  N       L  +M S G   ++ T +++I            
Sbjct: 62  QTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFA 121

Query: 224 ---------YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
                      LC   K+ EAL  +  +L  G   N V + ++IN  C++G    AL++ 
Sbjct: 122 FSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVL 181

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R++    G  V  N V ++ II+G CK   V  A  +   MI   I   V T+++LI G+
Sbjct: 182 RQI---EGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGF 238

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
              G  ++A RL +EMV + + P+   +N  +  L  EG ++ A  V++ M+ + + P  
Sbjct: 239 CIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTV 298

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ L  G C    V +A  + + +    +  ++ SYNI+IN  CK   +  A  L   
Sbjct: 299 VTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHE 358

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  RG+ P  +TY +LIDG CK G I  A ++ + M       ++V YNS+I+  CK+  
Sbjct: 359 MCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQH 418

Query: 515 LDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A +L++  +  G+   + TYN LI+G    G++  A  +F ++   G  VN   YNI
Sbjct: 419 VDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNI 478

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           +IN LCK G + +A  L+  M  +GIIPD VTY T++         E+  +L  +MV+ G
Sbjct: 479 MINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG 538

Query: 634 V 634
           V
Sbjct: 539 V 539



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 221/450 (49%), Gaps = 19/450 (4%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCK-ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +  M       ++  FN ++  L K +      LSL  +M   G+ P++   +++IN  C
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G + FA  +F K+  M                 G C  G+V  A      ++  G   
Sbjct: 114 HLGQMTFAFSVFAKILKM-----------------GLCLNGKVNEALLFHDHVLALGFHL 156

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY  LI+G  + G +  AL++  ++  + +  N V+Y++ I  L  +  V  A  + 
Sbjct: 157 NHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLY 216

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           S+MI K I P   T+S L  G C  G  K AF+L N+++ +++  DAY++NIL++ LCK 
Sbjct: 217 SEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKE 276

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  AK +++ M+  G+ P ++TY TL+DGYC    +  A  V   + ++   PN   Y
Sbjct: 277 GKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSY 336

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +ING CK   +D A  L       G+    +TYN+LI+G    G+I  A+ +  EM N
Sbjct: 337 NIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHN 396

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             I  + V YN LI+  CK     +A  L+K +  HGI P+  TY  L+    K    + 
Sbjct: 397 NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN 456

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             ++  D+++ G + +  TYN +I+ L  E
Sbjct: 457 AQDVFQDLLIKGYNVNAWTYNIMINGLCKE 486



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 17/395 (4%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           NV  ++ +I  LCK+  + +A  LY  M+   I P VV F+ +I   C VG  + A +LF
Sbjct: 192 NVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLF 251

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M VM   ++ P++ T N +++  CK G+++ A+ +   M+K G++  V TY TL+DGY
Sbjct: 252 NEM-VMK--NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGY 308

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                  +A  +   + +  + PN+  YN  I+       V+ AL +  +M  + I P  
Sbjct: 309 CLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHK 368

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ L  GLC+ G +  A++L +++    +  D  +YN LI+  CK+ ++  A  L+  
Sbjct: 369 VTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKK 428

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           +   G+ P++ TY  LIDG CKGG ++ A  V++++       N   YN +INGLCK+  
Sbjct: 429 IKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGL 488

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN------ 567
            D A+ LL   +  G++ DA+TY T+I   F   +  +A  +  EM   G+ V       
Sbjct: 489 FDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEIRR 548

Query: 568 -------KVGYNILINFLCKFGCYQQARELMKVMI 595
                   +G N++        C+    E   +MI
Sbjct: 549 TLVGRTLNLGMNLISLLFSALECFSFGEETKDIMI 583



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 153/303 (50%), Gaps = 41/303 (13%)

Query: 197 IGRF---WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           +G+F   ++L+ EMV      +  TFN+++ ALCKE K++EA ++   M+K G+ P VV 
Sbjct: 241 VGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVT 300

Query: 254 FN-----------------------------------MIINEACQVGDLEFALKLFRKMG 278
           +N                                   ++IN  C++  ++ AL LF +M 
Sbjct: 301 YNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMC 360

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 + P+ VT+N +I+G CK GR+ +A E+   M    I  ++ TY +LID + +  
Sbjct: 361 C---RGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQ 417

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             ++A+ L  ++ + G+ PN   YN  I  L   G ++ A  V  D++ K    + +TY+
Sbjct: 418 HVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYN 477

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           I+  GLC+ G   +A  L +++ +  ++ DA +Y  +I  L   +    A++LL  M+++
Sbjct: 478 IMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIK 537

Query: 459 GLI 461
           G++
Sbjct: 538 GVV 540



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 67/134 (50%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A    +++L+    +    + A  +++K+K  G   ++  +N  +  L K  ++     +
Sbjct: 401 ADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDV 460

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +++++  GY  N  T+N++I  LCKE   +EA  L  +M  +GI P+ V +  II     
Sbjct: 461 FQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFH 520

Query: 264 VGDLEFALKLFRKM 277
             + E A KL R+M
Sbjct: 521 KDENEKAQKLLREM 534


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 255/508 (50%), Gaps = 6/508 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF +LV A        GA    +++K +G  ++I  ++  +S   K+N+      L+KE 
Sbjct: 314 VFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEA 373

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            +     N   ++ +I+A C+   ++ A  L + M + GI   +  ++ +++    + D 
Sbjct: 374 KTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDE 433

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  L +F ++         P+ +++ C+IN + K+G+V  A  I   M  +GI  N +TY
Sbjct: 434 KKCLIVFERLKECC---FTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTY 490

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LI G+        A R+ +EM+K GL P+  +YN  I      G+++ A+ +L  M  
Sbjct: 491 SMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQK 550

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P +  +  + +G    G +K+A  + + +          +YN LI+ L + N +  
Sbjct: 551 ERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVER 610

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L+ M + G+ P+  TY  ++ GY   G+I  A + +  +K+   K ++ IY +++ 
Sbjct: 611 AVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLR 670

Query: 508 GLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
             CK   + +A ++ +  +SQ+I   +   YN LI+G+   G + EA  +  +M+  G+ 
Sbjct: 671 ACCKSGRMQSALAVTREMSSQKIAR-NTFVYNILIDGWARRGDVWEAADLMKQMKEDGVP 729

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   Y   IN  CK G  Q+A+ ++  M   G+ P+  TYTTL+  +++   P+  ++ 
Sbjct: 730 PNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKC 789

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKS 653
            ++M L+G+ PD   Y+ +++ LL   +
Sbjct: 790 FEEMKLAGLKPDEAAYHCLVTSLLSRAT 817



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 212/444 (47%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           ++ M + G   N   F  +++A      +  ALS    M   GI   +V ++++I+   +
Sbjct: 300 FENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGK 359

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           + D + A  LF++     GD    N + ++ II+  C+ G ++ AEE+ + M + GID  
Sbjct: 360 INDTQSADNLFKEAKTNLGDL---NGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAP 416

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           +  Y +++ GY      ++ L + + + +    P+ + Y   I+     G V  A+ +  
Sbjct: 417 IDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISK 476

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M    I  ++ TYS+L  G         AF++  ++L+  +  D   YN+LI   CK  
Sbjct: 477 EMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMG 536

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N+  A ++L  M    + P    +  +I+G+   G+++ A+ + + M++    P ++ YN
Sbjct: 537 NMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYN 596

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+GL +   ++ A S+L      G+  +  TY  ++ GY   G IA+AF  F++++  
Sbjct: 597 ALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEG 656

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+ ++   Y  L+   CK G  Q A  + + M    I  +   Y  L+  +++     E 
Sbjct: 657 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEA 716

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            +L   M   GV P+  TY + I+
Sbjct: 717 ADLMKQMKEDGVPPNIHTYTSYIN 740



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 185/376 (49%), Gaps = 5/376 (1%)

Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C  TP++  +  L+    +IG    A  + ++++  G   +   ++  +S  + L++   
Sbjct: 446 CCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTN 505

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            +++++EM+  G   +   +NL+I A CK   ++ A+ +  +M K  + P+   F  II 
Sbjct: 506 AFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE 565

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
                GD++ AL +   + +M      P  +T+N +I+G  +  +VE A  +   M  AG
Sbjct: 566 GFAVAGDMKRALDI---LDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAG 622

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N  TY  ++ GYA  G   +A     ++ + GL  +  +Y + +      G ++ AL
Sbjct: 623 ITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSAL 682

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +M  + I  + F Y+IL  G  R G V +A  L  Q+ E+ +  + ++Y   IN  
Sbjct: 683 AVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINAC 742

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+ ++  A+ ++  M   GL P++ TY TLI G+ +    + A++ +E MK    KP+ 
Sbjct: 743 CKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDE 802

Query: 500 VIYNSIINGLCKDASL 515
             Y+ ++  L   A++
Sbjct: 803 AAYHCLVTSLLSRATV 818



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 5/337 (1%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R +  +I  YA+ G    A    + M  RG+ PN  V+ S +H      D+ GAL    +
Sbjct: 278 REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEE 337

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD--AYSYNILINYLCKS 442
           M  + I     TYSIL  G  +    + A  L  +   +  +GD     Y+ +I+  C+S
Sbjct: 338 MKAEGIELTIVTYSILISGFGKINDTQSADNLFKEA--KTNLGDLNGIIYSNIIHAHCQS 395

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N+  A++L+  M   G+   I  Y +++ GY    + +  + V+E +K+    P+++ Y
Sbjct: 396 GNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISY 455

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +IN   K   +  A ++ +  +  G+  +  TY+ LI+G+        AF +F EM  
Sbjct: 456 GCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLK 515

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  ++  YN+LI   CK G   +A  +++ M    + P    +  ++  F+     + 
Sbjct: 516 SGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKR 575

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +++ D M  SG +P   TYNA+I  L+ +   E  V
Sbjct: 576 ALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAV 612



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 139/320 (43%), Gaps = 16/320 (5%)

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV 153
           L+   AI +LL+      +A   MGN+  A     +  LE +    E  + +   F  ++
Sbjct: 518 LQPDRAIYNLLI------EAFCKMGNMDRA-----IRILEKM--QKERMQPSNRAFRPII 564

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
                 G  + A D++  ++  G + ++  +N  +  L++ N++ R   +  +M   G  
Sbjct: 565 EGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGIT 624

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            N +T+ +++        + +A   + ++ + G+  +V  +  ++   C+ G ++ AL +
Sbjct: 625 PNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAV 684

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            R+M   S   +  N+  +N +I+G+ + G V  A ++   M + G+  N+ TY + I+ 
Sbjct: 685 TREM---SSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA 741

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             + G  + A  + DEM   GL PN   Y + I         + AL    +M    + PD
Sbjct: 742 CCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPD 801

Query: 394 HFTYSILTKGLCRNGCVKQA 413
              Y  L   L     V + 
Sbjct: 802 EAAYHCLVTSLLSRATVMEG 821


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 230/493 (46%), Gaps = 42/493 (8%)

Query: 176  GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS--CGYVENVNTFNLVIYALCKECKLE 233
            G   SI  +N  L   +K     +   L KEM +   G + N  T+N+VI  L ++  LE
Sbjct: 1114 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 1173

Query: 234  EA----------------------------------LSLYYRMLKSGIWPNVVCFNMIIN 259
            EA                                    L   M   GI P VV +N +I+
Sbjct: 1174 EAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 1233

Query: 260  EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
               Q G +E A   F +M  M    +LP+ +T+N ++NG+CK G ++ A  +   + +AG
Sbjct: 1234 GLLQSGLVEAAQVKFAEMRAMG---LLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290

Query: 320  IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
            +   V TY  LIDGY R G  EEA  L +EM ++G +PN   Y   +        +  A 
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAR 1350

Query: 380  FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                +M+ K + PD F Y+         G + +AF+L   ++ E +  D  +YNILI+ L
Sbjct: 1351 EFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGL 1410

Query: 440  CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            CK+ NL  AK+L   M+  GL PD ITY  LI  +C+ G +  A +++ NM      P+ 
Sbjct: 1411 CKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSA 1470

Query: 500  VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
            V +  II+  C+  +L +A    +     G+  + ITYN LI+     G+   A   F E
Sbjct: 1471 VTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHE 1530

Query: 559  MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
            M   G+  NK  Y +LI+  CK G ++ A      M  +GI PDY+T+  L+  F  +  
Sbjct: 1531 MLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGFDGHV- 1589

Query: 619  PEEVIELHDDMVL 631
                IE  D+++L
Sbjct: 1590 -HHTIEYLDNVIL 1601



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 254/544 (46%), Gaps = 45/544 (8%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            CKA  A  D     C             +++   G +  +   N  L  L          
Sbjct: 1054 CKARDATLDTCSTLCLS---------AFREMASHGVAPDVKDCNRVLRVLRDAARWDDIC 1104

Query: 202  KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK--SGIWPNVVCFNMIIN 259
             +++EM+  G   ++ T+N ++ +  KE + ++   L   M    SG  PN V +N++I 
Sbjct: 1105 AVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVIT 1164

Query: 260  EACQVGDLEFALKLFRKMGV-------------------------------MSGDSVLPN 288
               + GDLE A +L   M +                               M  + ++P 
Sbjct: 1165 GLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPT 1224

Query: 289  SVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDGYARGGSSEEALRLC 347
             VT+N +I+G  + G VE A ++++A ++A G+  +V TY +L++GY + G+ +EAL L 
Sbjct: 1225 VVTYNAMIHGLLQSGLVE-AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 1283

Query: 348  DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             ++ + GL P  + YN  I      GD+E A  +  +M ++   P+  TY+IL KG    
Sbjct: 1284 GDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNV 1343

Query: 408  GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
              +  A +  +++L + +  D ++YN  I       ++A A +L   +++ G+  D +TY
Sbjct: 1344 RSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTY 1403

Query: 468  GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
              LI G CK GN++ A ++   M     +P+ + Y  +I+  C+   L  A+ +      
Sbjct: 1404 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMIS 1463

Query: 528  IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
             GLL  A+T+  +I+ Y   G +  A+  F +M   G+  N++ YN+LI+ LC+ G  Q 
Sbjct: 1464 DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 1523

Query: 587  ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            A      M+  G++ +  TYT L+    K  + E+ +  + +M  +G+ PD  T+ A++ 
Sbjct: 1524 ASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLK 1583

Query: 647  PLLG 650
               G
Sbjct: 1584 GFDG 1587



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 172/378 (45%), Gaps = 34/378 (8%)

Query: 145  TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
            T   ++A++    Q G  E A     +++  G    +  +N+ L+   K   +     L+
Sbjct: 1224 TVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 1283

Query: 205  KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
             ++   G    V T+N++I   C+   LEEA  L   M + G  PNV  + +++  +  V
Sbjct: 1284 GDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNV 1343

Query: 265  GDLEFALKLFRKM--------------------------------GVMSGDSVLPNSVTH 292
              L  A + F +M                                 V+  + +  ++VT+
Sbjct: 1344 RSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTY 1403

Query: 293  NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
            N +I+G CK G ++ A+E++  M+  G+  +  TY  LI  +   G   EA ++ + M+ 
Sbjct: 1404 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMIS 1463

Query: 353  RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
             GL+P+ V +   IH     G++  A      M+++ + P+  TY++L   LCR G  + 
Sbjct: 1464 DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 1523

Query: 413  AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
            A    +++LE  +V + Y+Y +LI+  CK  N   A +    M   G+ PD +T+  L+ 
Sbjct: 1524 ASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLK 1583

Query: 473  GYCKGGNIEGAVQVYENM 490
            G+   G++   ++  +N+
Sbjct: 1584 GF--DGHVHHTIEYLDNV 1599



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 4/241 (1%)

Query: 416  LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG--LIPDIITYGTLIDG 473
            +H ++LE  +     +YN L++   K         LL  M  RG   +P+ +TY  +I G
Sbjct: 1106 VHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITG 1165

Query: 474  YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
              + G++E A ++ E M+ + KK +   YN +I GL     +     L    +  G++  
Sbjct: 1166 LTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPT 1224

Query: 534  I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            + TYN +I+G   +G +  A   F+EMR +G+  + + YN L+N  CK G  ++A  L  
Sbjct: 1225 VVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFG 1284

Query: 593  VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
             +   G+ P  +TY  L+  + +    EE   L ++M   G  P+  TY  ++   L  +
Sbjct: 1285 DLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVR 1344

Query: 653  S 653
            S
Sbjct: 1345 S 1345


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 177/669 (26%), Positives = 316/669 (47%), Gaps = 52/669 (7%)

Query: 10  YKSNSPLSRAFHVGKQFANPSTEDIV-FRAICVNLRQRKWKILEQMAPSLTNSLVNRVVS 68
           Y    PL   FH+ ++ A  S   +     I   LR R         P  + S    V+S
Sbjct: 44  YTPPQPL--LFHLLRRLATSSPSRLPRLLGILPRLRHR---------PRFSESAALVVLS 92

Query: 69  EFRKS--PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA--- 123
            F ++  P  AL  +  +      +  + S  A++   V  RRF DA     +L      
Sbjct: 93  AFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFG 152

Query: 124 NSVSP-LEFLEGLLDSY----EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK--- 175
             ++P L+    +L S     ++ +A   +FD+L   C  +      Y  +    VK   
Sbjct: 153 RRIAPNLQTYNIMLRSLCVRGDLDRAV-TLFDSL--RCRGLAPDRITYSTLMSGFVKNNR 209

Query: 176 ------------GHSVSIHA--WNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFN 220
                        + V   A  +N  L    +  E  +  ++++++V   G   N+ T+N
Sbjct: 210 LDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYN 269

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           +++  LCK    +EA  ++ RM+ +   P+++ +  +I+  C+  D++ A +++ +M + 
Sbjct: 270 VMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEM-IK 328

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           +G  ++P+ V +N ++ GFC  GRV  A +   +M  +GI  NV +Y  ++ G   GG  
Sbjct: 329 TG--LVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMV 385

Query: 341 EEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
           ++A  L + + K   L P+ V +++ IH L  +G    +L +L +        D F+YS 
Sbjct: 386 DKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSS 445

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           +  GLC++G +  A KL+ ++  +    +++ YN LIN  C+++  + A ++ S M    
Sbjct: 446 MISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND 505

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
             P  ITY TLI G CK      A +    M +     ++  Y S+I GLC+D  +D A 
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGAL 565

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG-IAVNKVGYNILINF 577
           +L       GL  D + +N LI+G    GK+ EA  + SEM+       N V YN L++ 
Sbjct: 566 ALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDG 625

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF-SKNCSPEEVIELHDDMVLSGVSP 636
             + GC+ +A  L   ++ +G++PD ++Y T +    S N +PE V +L ++M+ SG+ P
Sbjct: 626 FYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGV-QLLNEMLASGIIP 684

Query: 637 DNQTYNAII 645
              T+N ++
Sbjct: 685 TAITWNILV 693



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 239/507 (47%), Gaps = 40/507 (7%)

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL-KV 174
           LM   +  N +    +L   + SYE+ +     ++AL+  C + G  E A  V ++L + 
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEV-QPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRD 258

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G S ++  +N  L  L KL        +++ MV+  +  ++ T+  +I+ LC+   ++ 
Sbjct: 259 PGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDS 318

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM----------------G 278
           A  +Y  M+K+G+ P+VV +N ++   C  G +  A K +  M                G
Sbjct: 319 AARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKG 378

Query: 279 VMSG----------------DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +  G                DS+ P+ VT + +I+G C+ G    + +I      +G + 
Sbjct: 379 LFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL 438

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  +Y+++I G  + G  ++A++L +++      PN+ +YN+ I+          A+ V 
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVY 498

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           S M +    P   TY+ L  GLC+     +A +   ++LE+  + D  +Y  LI  LC+ 
Sbjct: 499 SQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRD 558

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK---PNL 499
             +  A  L + ++ +GL  D++ +  LI G C  G ++ A Q+   MK  EK    PN+
Sbjct: 559 KKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK--EKNNCCPNV 616

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN++++G  +    D A SL  A    GL+ D I+YNT I G     +  E   + +E
Sbjct: 617 VTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNE 676

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQ 585
           M   GI    + +NIL+  + K+G  Q
Sbjct: 677 MLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 218/437 (49%), Gaps = 7/437 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N+ T+N+++ +LC    L+ A++L+  +   G+ P+ + ++ +++   +   L+ AL L 
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLL 217

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK-AGIDCNVRTYATLIDG 333
            +M       V P++V +N ++ G  + G  E A  +   +++  G   N+ TY  ++DG
Sbjct: 218 DEM---PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDG 274

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             + G  +EA  + + MV     P+ + Y + IH L    DV+ A  V S+MI   + PD
Sbjct: 275 LCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPD 334

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y+ L KG C  G V +A+K  +  +    + +  SYNI++  L     +  A  L  
Sbjct: 335 VVIYNSLLKGFCHAGRVGEAWKFWDS-MSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWE 393

Query: 454 SMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
            +     L PD++T+ T+I G C+ G    ++Q+ E  +   K+ +   Y+S+I+GLCKD
Sbjct: 394 LLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKD 453

Query: 513 ASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD A  L +  S      ++  YN LING+    K ++A  ++S+M     +   + Y
Sbjct: 454 GRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITY 513

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           N LI+ LCK   Y +A    + M+  G + D  TY +L+    ++   +  + L + ++ 
Sbjct: 514 NTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILD 573

Query: 632 SGVSPDNQTYNAIISPL 648
            G+  D   +N +I  L
Sbjct: 574 KGLQTDVVMHNILIHGL 590



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 211/434 (48%), Gaps = 7/434 (1%)

Query: 221 LVIYALCKECKLEEALSLYYRMLKS--GIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           LV+ +      + +A    +R L S  G  P V   N +++   +      A   F  + 
Sbjct: 88  LVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLS 147

Query: 279 VMS-GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             + G  + PN  T+N ++   C  G ++ A  +  ++   G+  +  TY+TL+ G+ + 
Sbjct: 148 HGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKN 207

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI-DKHICPDHFT 396
              + AL L DEM    + P+ V YN+ +   F  G+ E A+ V   ++ D    P+  T
Sbjct: 208 NRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLAT 267

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+++  GLC+ G  K+A  +  +++  +   D  +Y  +I+ LC+S ++ +A ++ S MI
Sbjct: 268 YNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMI 327

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
             GL+PD++ Y +L+ G+C  G +  A + +++M  V    N+  YN ++ GL     +D
Sbjct: 328 KTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSM-SVSGIRNVTSYNIMLKGLFDGGMVD 386

Query: 517 AAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
            A  L +  ++   L  D +T++T+I+G    G   ++  +  E R  G  +++  Y+ +
Sbjct: 387 KATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSM 446

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I+ LCK G    A +L + + +    P+   Y  L+  F +     + I ++  M  +  
Sbjct: 447 ISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC 506

Query: 635 SPDNQTYNAIISPL 648
           SP   TYN +I  L
Sbjct: 507 SPTTITYNTLIHGL 520



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 217/444 (48%), Gaps = 11/444 (2%)

Query: 216 VNTFNLVIYALCKECKLEEA----LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           V + N ++ A  +  +  +A     SL +      I PN+  +N+++   C  GDL+ A+
Sbjct: 120 VRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAV 179

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            LF  +       + P+ +T++ +++GF K  R++ A  +   M    +  +   Y  L+
Sbjct: 180 TLFDSLRCRG---LAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALL 236

Query: 332 DGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
            G  R G  E+A+R+ +++V+  G  PN   YN  +  L   G  + A  V   M+  + 
Sbjct: 237 GGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNH 296

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  TY  +  GLCR+  V  A ++++++++  +V D   YN L+   C +  +  A +
Sbjct: 297 QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWK 356

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGL 509
              SM V G I ++ +Y  ++ G   GG ++ A  ++E ++K +   P++V ++++I+GL
Sbjct: 357 FWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGL 415

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C+    + +  +L+ ++  G  LD  +Y+++I+G   +G++ +A  ++ ++       N 
Sbjct: 416 CEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNS 475

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             YN LIN  C+   +  A  +   M  +   P  +TY TL+    K     E      +
Sbjct: 476 HIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTRE 535

Query: 629 MVLSGVSPDNQTYNAIISPLLGEK 652
           M+  G   D  TY ++I  L  +K
Sbjct: 536 MLEKGCMLDVNTYGSLIRGLCRDK 559



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 169/347 (48%), Gaps = 8/347 (2%)

Query: 319 GIDCNVRTYATLIDGYARGGSSEEA----LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           G +  VR++  L+D + R     +A      L      R + PN   YN  +  L   GD
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++ A+ +   +  + + PD  TYS L  G  +N  +  A  L +++    +  DA  YN 
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 435 LINYLCKSNNLAAAKQLLSSMIVR-GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           L+    ++     A ++   ++   G  P++ TY  ++DG CK G  + A  V+E M   
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
             +P+++ Y ++I+GLC+   +D+A  +     + GL+ D + YN+L+ G+   G++ EA
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH-GIIPDYVTYTTLVT 611
           +  +  M   GI  N   YNI++  L   G   +A +L +++     + PD VT++T++ 
Sbjct: 355 WKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIH 413

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              +     + +++ ++   SG   D  +Y+++IS L  +   +D V
Sbjct: 414 GLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAV 460


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 214/415 (51%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ + H+L S C ++H L   +   +A  L+  ++S     S       +L++     + 
Sbjct: 6   NSTYRHTLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A    +  K     V        L HL+KL      W  YK
Sbjct: 66  LYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A  ++  + K  + P+VV FN ++N   ++G
Sbjct: 126 EILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ +G +P+ + YN+ I+ L   GD+  A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K + PD  TY+ L  G C+ G ++  F+L  +++ E++  D  +Y  LI+ LC+    
Sbjct: 303 IMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRA 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +++ +CK G+++ A ++   M++    P +V
Sbjct: 363 GDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVV 417



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 155/278 (55%), Gaps = 1/278 (0%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+    N +++ FCK G +  A+ +  A+ K  +  +V ++ TL++GY R G  +E  RL
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRL 193

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M   G+ P+   Y+  I+ L  E  ++ A  +L++M+D  + P+  T++ L  G C+
Sbjct: 194 KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           NG V  A +++ Q+L +  + D  +YN LI  LC+  +L  A+ L+  MI++GL PD IT
Sbjct: 254 NGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKIT 313

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDG CK G++E   ++ + M +   + + V Y ++I+GLC++     A+ +L+   
Sbjct: 314 YTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREML 373

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            +GL  D  TY  ++N +   G +  A  +  EM+  G
Sbjct: 374 TVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNG 411



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 156/289 (53%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G  P+   +N  +H    EG++  A  V   +    + P   +++ L  G  R G
Sbjct: 126 EILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A ++L+ M+  GL+P+ +T+ 
Sbjct: 186 DLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLC+   L  A+ L++     
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMK 305

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +   F +   M    I +++V Y  LI+ LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F K    +   +L  +M  +G  P
Sbjct: 366 EKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVP 414



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 155/292 (53%), Gaps = 1/292 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD
Sbjct: 127 ILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGD 186

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + S M    + PD +TYS+L  GLC+   + +A ++ N++L+  +V +  ++  
Sbjct: 187 LDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTT 246

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK+  +  A ++   M+ +G +PD+ITY TLI G C+ G++  A  + E M    
Sbjct: 247 LIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKG 306

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            KP+ + Y ++I+G CK+  L+    L +   R  + LD +TY  LI+G    G+  +A 
Sbjct: 307 LKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAE 366

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            M  EM  VG+  +   Y +++N  CK G  + A +L++ M  +G +P  VT
Sbjct: 367 KMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 133/242 (54%), Gaps = 1/242 (0%)

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
            + ++LE       Y +NIL++  CK   +  A+ +  ++    L P ++++ TL++GY 
Sbjct: 123 FYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYI 182

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
           + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  +L      GL+ + +
Sbjct: 183 RLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T+ TLI+G+  NGK+  A  ++ +M + G   + + YN LI  LC+ G   QAR+L++ M
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEM 302

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           I+ G+ PD +TYTTL+    K    E   EL   M+   +  D  TY A+IS L  E  A
Sbjct: 303 IMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRA 362

Query: 655 ED 656
            D
Sbjct: 363 GD 364



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P  + ++IL    C+ G ++ A  + + + +  +     S+N L+N   +  +L    +L
Sbjct: 134 PSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRL 193

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
            S+M   G+ PD+ TY  LI+G CK   ++ A ++   M      PN V + ++I+G CK
Sbjct: 194 KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  +D A  + +     G L D ITYNTLI G    G + +A  +  EM   G+  +K+ 
Sbjct: 254 NGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKIT 313

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LI+  CK G  +   EL K MI   I  D VTYT L++   +     +  ++  +M+
Sbjct: 314 YTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREML 373

Query: 631 LSGVSPDNQTYNAIIS 646
             G+ PDN TY  I++
Sbjct: 374 TVGLKPDNGTYTMIMN 389



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 52/245 (21%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLI 471
           +SY  +I++LC    L  AK L+  ++ R                    I D+  +  L+
Sbjct: 14  HSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVFSGLM 73

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
             Y + G +  A+Q +    ++ KK  + +              D  + +L+       L
Sbjct: 74  LAYLESGFVRDAIQCF----RLTKKHKIWV------------PFDTCRKVLEH------L 111

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
             + Y  L+ G++             E+   G   +   +NIL++  CK G  + A+ + 
Sbjct: 112 MKLRYFRLVWGFY------------KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVF 159

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             +    + P  V++ TL+  + +    +E   L   M  +GV PD  TY+ +I+ L  E
Sbjct: 160 DAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKE 219

Query: 652 KSAED 656
              ++
Sbjct: 220 SKMDE 224


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 170/650 (26%), Positives = 283/650 (43%), Gaps = 42/650 (6%)

Query: 27  ANPSTEDIV--FRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRK-----SPKLALE 79
           A+ ST DIV     +    R  K +  +++APS+T +    V   FR       P  AL 
Sbjct: 17  ASTSTPDIVAELGRVISTRRWNKGRAYKRLAPSVTAA---HVADLFRAPVAPLDPATALA 73

Query: 80  FYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           F+ WV     F H+  S  A++ LL   R   +   L+ +++S +  +  E +   +D+ 
Sbjct: 74  FFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTA--EDMREAVDAI 131

Query: 140 EI----------------------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           +                       C+     +  L++   +      A  ++  +   G 
Sbjct: 132 QAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGC 191

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
           S+++H +   +  L K   I    ++ +EM   G V +V T+N +I   CK  ++++AL 
Sbjct: 192 SLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALG 251

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           +   M ++G  P+   +N++I   C  G+     +      ++ G    P  +T   IIN
Sbjct: 252 IKALMERNGCNPDDWTYNILIYGLC--GEKPDEAEELLNDAIVRG--FTPTVITFTNIIN 307

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           G+CK  R++ A  ++ +M+ +    +++ Y  LI+   +    +EA     EM   GL P
Sbjct: 308 GYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAP 367

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           N V+Y S I      G V  AL V   M  +   P+ +TYS L  GL ++  + +A  L 
Sbjct: 368 NVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALI 427

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++ E+ +     +Y  LI   CK +    A +L   M   GL PD   Y  L    CK 
Sbjct: 428 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS 487

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITY 536
           G  E A         V  K   V Y S+++G  K  + D A  L++     G   D+ TY
Sbjct: 488 GRAEEAYSFLVRKGVVLTK---VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTY 544

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           + L+       K+ EA ++  +M   G+  N V Y I+I+ + K G +  A+ +   MI 
Sbjct: 545 SVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 604

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            G  P   TYT  ++ + K    EE   L  +M   GV+PD  TYN  I+
Sbjct: 605 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFIN 654



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 231/479 (48%), Gaps = 12/479 (2%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG-YVENVNTFNLVIYALCK-ECKLEE 234
           H+ + HA    L  L +      + KL   MVSC    E++      I A+ +    L +
Sbjct: 86  HTAASHA--ALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVDAIQAIRRVGGDLRK 143

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  L   M   G   N   + ++I   C+   +  AL L   M V  G S+  N  T+  
Sbjct: 144 ACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMM-VQDGCSL--NLHTYTL 200

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I G CK GR+  A  +   M   G+  +V TY  +IDGY + G  ++AL +   M + G
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
             P++  YN  I+ L  E   E A  +L+D I +   P   T++ +  G C+   +  A 
Sbjct: 261 CNPDDWTYNILIYGLCGEKPDE-AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDAL 319

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           ++   +L  +   D  +Y +LIN L K      AK+ +S M   GL P+++ Y ++IDGY
Sbjct: 320 RVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGY 379

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA- 533
           CK G +  A++V+  M+    +PN   Y+S+I GL +D  L  A +L+   Q  G+    
Sbjct: 380 CKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 439

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           ITY TLI G     +   AF +F  M   G+  ++  YN+L + LCK G   +A E    
Sbjct: 440 ITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG---RAEEAYSF 496

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           ++  G++   VTYT+LV  FSK  + +    L + MV  G   D+ TY+ ++  L  +K
Sbjct: 497 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQK 555



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 245/575 (42%), Gaps = 83/575 (14%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R  DAL +   LM  N  +P ++   +L  Y +C   P                + A ++
Sbjct: 245 RMKDALGIKA-LMERNGCNPDDWTYNIL-IYGLCGEKP----------------DEAEEL 286

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           +    V+G + ++  + N ++   K   I    ++   M+S     ++  + ++I  L K
Sbjct: 287 LNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIK 346

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           +C+ +EA      M  +G+ PNVV +  II+  C+VG +  AL++FR   +M  +   PN
Sbjct: 347 KCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFR---LMEHEGCRPN 403

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           + T++ +I G  +  ++  A  +   M + GI   V TY TLI G  +    + A RL +
Sbjct: 404 AWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 463

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL----------------------------- 379
            M + GL P+   YN   H L   G  E A                              
Sbjct: 464 MMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTD 523

Query: 380 ---FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
               ++  M+++    D +TYS+L + LC+   + +A  + +Q+    +  +  +Y I+I
Sbjct: 524 FAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIII 583

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + + K      AK + + MI  G  P   TY   I  YCK G IE A  +   M++    
Sbjct: 584 SEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVA 643

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA------ITYNTLINGYFINGKIA 550
           P++V YN  ING      +D A S L+      ++DA       TY  L+  +     + 
Sbjct: 644 PDVVTYNVFINGCGHMGYMDRAFSTLKR-----MIDASCEPNYWTYWILLKHFLKMSLVD 698

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
             +   S M N  I ++ V                   +L++ M+ HG+ P  VTY++++
Sbjct: 699 AHYVDTSGMWN-WIELDTVW------------------QLLERMVKHGLNPTAVTYSSII 739

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
             F K    EE   L D M    +SP+ + Y  +I
Sbjct: 740 AGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLI 774



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 158/335 (47%), Gaps = 2/335 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  +Y  LI G        EAL L   MV+ G   N   Y   I  L  EG + GA  VL
Sbjct: 159 NEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVL 218

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  + + P  +TY+ +  G C++G +K A  +   +       D ++YNILI  LC  
Sbjct: 219 EEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-G 277

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                A++LL+  IVRG  P +IT+  +I+GYCK   I+ A++V  +M     K +L  Y
Sbjct: 278 EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAY 337

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +IN L K      AK  +      GL  + + Y ++I+GY   GK+  A  +F  M +
Sbjct: 338 GVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEH 397

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G   N   Y+ LI  L +     +A  L+  M   GI P  +TYTTL+    K    + 
Sbjct: 398 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 457

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              L + M  +G++PD Q YN +   L     AE+
Sbjct: 458 AFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEE 492



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/496 (21%), Positives = 204/496 (41%), Gaps = 63/496 (12%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L  +E C+     + +L+    Q      A  +I K++  G +  +  +   +    K +
Sbjct: 394 LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 453

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           E    ++L++ M   G   +   +N++ +ALCK  + EEA S    +++ G+    V + 
Sbjct: 454 EFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYT 510

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +++   + G+ +FA  L  KM     +    +S T++ ++   CK  ++  A  I   M
Sbjct: 511 SLVDGFSKAGNTDFAAVLIEKM---VNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
             +G+ CN+  Y  +I    + G  + A  + +EM+  G  P+   Y   I      G +
Sbjct: 568 TLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQI 627

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           E A  ++ +M    + PD  TY++   G    G + +AF    ++++     + ++Y IL
Sbjct: 628 EEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687

Query: 436 INYLCKSN----------------NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           + +  K +                 L    QLL  M+  GL P  +TY ++I G+CK   
Sbjct: 688 LKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 747

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIIN-------------------------------- 507
           +E A  ++++M+  +  PN  IY  +I                                 
Sbjct: 748 LEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHY 807

Query: 508 ---GLCKDASLDAAKSLLQASQRIGLLD----AITYNTLINGYFINGKIAEAFAMFSEMR 560
              GLC +   D AKSL      +G+ D     + +  L +G    G +     + S M 
Sbjct: 808 LIVGLCDEGDYDKAKSLF--CDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAME 865

Query: 561 NVGIAVNKVGYNILIN 576
           N    ++   Y+++ +
Sbjct: 866 NRHCQIDSETYSMVTD 881



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 179/416 (43%), Gaps = 39/416 (9%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKA-----------------TPAVFDAL 152
           FD+A  L   +M  N ++P E    +L ++ +CK+                 T   + +L
Sbjct: 455 FDNAFRLF-EMMEQNGLTPDEQAYNVL-THALCKSGRAEEAYSFLVRKGVVLTKVTYTSL 512

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           V   ++ G T+ A  +I+K+  +G     + ++  L  L K  ++     +  +M   G 
Sbjct: 513 VDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGV 572

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             N+  + ++I  + KE K + A S++  M+ SG  P+   + + I+  C++G +E A  
Sbjct: 573 KCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEH 632

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY----- 327
           L   +G M  D V P+ VT+N  ING   +G ++ A      MI A  + N  TY     
Sbjct: 633 L---IGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLK 689

Query: 328 ----ATLIDGYARGGSS-------EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
                +L+D +    S        +   +L + MVK GL P  V Y+S I        +E
Sbjct: 690 HFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLE 749

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  +   M  K I P+   Y++L K  C      +A      ++E        SY+ LI
Sbjct: 750 EACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLI 809

Query: 437 NYLCKSNNLAAAKQLLSSMI-VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
             LC   +   AK L   ++ +     + + +  L DG  K G+++   Q+   M+
Sbjct: 810 VGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAME 865



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/349 (23%), Positives = 137/349 (39%), Gaps = 84/349 (24%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E CKA    +  L++A  +      A  ++ ++ + G   +I A+   +S ++K  +   
Sbjct: 535 EGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDH 594

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              ++ EM+S G+  +  T+ + I + CK  ++EEA  L   M + G+ P+VV +N+ IN
Sbjct: 595 AKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFIN 654

Query: 260 EACQVGDLEFA----------------------LKLFRKMGVMSG--------------D 283
               +G ++ A                      LK F KM ++                D
Sbjct: 655 GCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELD 714

Query: 284 SVL------------PNSVTHNCIINGFCKLGRVEFA---------------EEIRYAMI 316
           +V             P +VT++ II GFCK  R+E A               EEI   +I
Sbjct: 715 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLI 774

Query: 317 KA--------------------GIDCNVRTYATLIDGYARGGSSEEALRL-CDEMVKRGL 355
           K                     G   ++ +Y  LI G    G  ++A  L CD +     
Sbjct: 775 KCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDY 834

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
             N V +      L   G V+    +LS M ++H   D  TYS++T  +
Sbjct: 835 NHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNI 883



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 97/274 (35%), Gaps = 56/274 (20%)

Query: 126 VSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           +  +E  E L+   E     P V  ++  +  C  +G  + A+  ++++       +   
Sbjct: 624 IGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWT 683

Query: 184 WNNFLSHLVKLN----------------EIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +   L H +K++                E+   W+L + MV  G      T++ +I   C
Sbjct: 684 YWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFC 743

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV----------------------- 264
           K  +LEEA  L+  M    I PN   + M+I   C +                       
Sbjct: 744 KATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLE 803

Query: 265 ------------GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
                       GD + A  LF    ++  +    N V    + +G  K G V+F  ++ 
Sbjct: 804 SYHYLIVGLCDEGDYDKAKSLF--CDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLL 861

Query: 313 YAMIKAGIDCNVRTYATLIDG-YARGGSSEEALR 345
            AM       +  TY+ + D  +   GS    LR
Sbjct: 862 SAMENRHCQIDSETYSMVTDNIHEASGSVVSELR 895


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+   +  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AFK   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+   L+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L        L
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   +    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A +  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVY-------------------ENMKKVEK----------------KP 497
            Y + G +  A++ Y                   E++ K++                   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++   K+  +  A+S+  A  +  L  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ + ++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 183/655 (27%), Positives = 298/655 (45%), Gaps = 56/655 (8%)

Query: 44  RQRKWKILEQMAPSLTNSLVNRVVSEFR--KSPKLALEFYTWVGENNRFSHSLESSCAIV 101
           R   ++  +Q+   L+    +R+  EFR   +PK AL+F+    ++  FS SL S C ++
Sbjct: 63  RSLDYEQCKQLITVLSPHEFDRLFPEFRFKVNPKTALDFFRLASDSFSFSFSLRSYCLLI 122

Query: 102 HLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDS-YEICKATPAV---FDALVRA- 155
            LL++      A +++  L++ N  V P     GL DS   I  A  ++   FD  +R  
Sbjct: 123 GLLLDANLSSPARVVLIRLINGNVPVLPCGN-GGLRDSRVAIADAMASLSLCFDEEIRRK 181

Query: 156 ---------CTQIGATEGAY---DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
                    CTQ    +G Y   DV   L  KG   S    N  L+ LV+  E  +  + 
Sbjct: 182 MSDLLIEVYCTQF-KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEA 240

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  +V  G   +V  F   I A CK  K+EEA+ L+ +M ++G+ PNVV +N +I+    
Sbjct: 241 F-HVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGM 299

Query: 264 VGDLEFALKLFRKM---GV-----------------------------MSGDSVLPNSVT 291
            G  + A     KM   GV                             M+     PN + 
Sbjct: 300 SGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIV 359

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I+   + G +  A EI+  M+  G+     TY TLI GY + G ++ A RL  EM+
Sbjct: 360 YNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEML 419

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G   N   + S I  L +    + AL  + +M+ +++ P     + L  GLC++G   
Sbjct: 420 SIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 479

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A +L  + L +  + D  + N L++ LC++  L    ++   ++ RG + D ++Y TLI
Sbjct: 480 KAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLI 539

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G C    ++ A    + M K   KP+   Y+ +I GL     ++ A       +R G++
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMI 599

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TY+ +I+G     +  E   +F EM +  +  N V YN LI   C+ G    A EL
Sbjct: 600 PDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALEL 659

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            + M   GI P+  TYT+L+   S     EE   L ++M + G+ P+   Y A+I
Sbjct: 660 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALI 714



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 225/475 (47%), Gaps = 4/475 (0%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T   +  LV+  T+      AY V++++  KG   ++  +NN +  L++   + +  +
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIE 378

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           +   MVS G     +T+N +I   CK  + + A  L   ML  G   N   F  +I   C
Sbjct: 379 IKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLC 438

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
                + AL+    +G M   ++ P       +I+G CK G+   A E+    +  G   
Sbjct: 439 SHHMFDSALRF---VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLV 495

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           + +T   L+ G    G  EE  R+  E++ RG + + V YN+ I        ++ A   +
Sbjct: 496 DTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFM 555

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M+ K + PD++TYSIL +GL     V++A +         M+ D Y+Y+++I+  CK+
Sbjct: 556 DEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKA 615

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                 ++L   M+   L P+ + Y  LI  YC+ G +  A+++ E+MK     PN   Y
Sbjct: 616 ERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATY 675

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            S+I G+   + ++ AK LL+  +  GL  +   Y  LI+GY   G++ +   +  EM +
Sbjct: 676 TSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 735

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             +  NK+ Y ++I    + G   +A  L+  M   GI+PD +TY   +  + K 
Sbjct: 736 KNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQ 790



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 258/566 (45%), Gaps = 42/566 (7%)

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKA-TPAV--FDALVRACTQIGATEGAYDVIQKLKVK 175
           N++  + V   EF +     + +CK  +P V  F   + A  + G  E A ++  K++  
Sbjct: 222 NILLTSLVRATEFQKCCEAFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEA 281

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   ++  +N  +  L         +   ++MV  G    + T+++++  L K  ++ +A
Sbjct: 282 GVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDA 341

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
             +   M + G  PNV+ +N +I+   + G L  A+++ + + V  G S+   S T+N +
Sbjct: 342 YCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEI-KDLMVSKGLSL--TSSTYNTL 398

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA--------------------------- 328
           I G+CK G+ + AE +   M+  G + N  ++                            
Sbjct: 399 IKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNM 458

Query: 329 --------TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
                   TLI G  + G   +A+ L  + + +G + +    N+ +H L   G +E    
Sbjct: 459 SPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFR 518

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +  +++ +    D  +Y+ L  G C N  + +AF   ++++++ +  D Y+Y+ILI  L 
Sbjct: 519 IQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLL 578

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             N +  A Q        G+IPD+ TY  +IDG CK    E   ++++ M     +PN V
Sbjct: 579 NMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTV 638

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
           +YN +I   C+   L  A  L +  +  G+  ++ TY +LI G  I  ++ EA  +  EM
Sbjct: 639 VYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEM 698

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           R  G+  N   Y  LI+   K G   +   L++ M    + P+ +TYT ++  ++++ + 
Sbjct: 699 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 758

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAII 645
            E   L  +M   G+ PD+ TY   I
Sbjct: 759 TEASRLLHEMREKGIVPDSITYKEFI 784



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 193/442 (43%), Gaps = 39/442 (8%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++ L+ +  + G+   A ++   +  KG S++   +N  +    K  +     +L KEM
Sbjct: 359 VYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEM 418

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S G+  N  +F  VI  LC     + AL     ML   + P       +I+  C+ G  
Sbjct: 419 LSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 478

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A++L+ K         L ++ T N +++G C+ G++E    I+  ++  G   +  +Y
Sbjct: 479 SKAVELWLKF---LNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSY 535

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            TLI G       +EA    DEMVK+GL P+N  Y+  I  L     VE A+    D   
Sbjct: 536 NTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKR 595

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA- 446
             + PD +TYS++  G C+    ++  KL ++++  ++  +   YN LI   C+S  L+ 
Sbjct: 596 NGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSM 655

Query: 447 ----------------------------------AAKQLLSSMIVRGLIPDIITYGTLID 472
                                              AK LL  M + GL P++  Y  LID
Sbjct: 656 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALID 715

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           GY K G +     +   M      PN + Y  +I G  +D ++  A  LL   +  G++ 
Sbjct: 716 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVP 775

Query: 532 DAITYNTLINGYFINGKIAEAF 553
           D+ITY   I GY   G + +AF
Sbjct: 776 DSITYKEFIYGYLKQGGVLQAF 797



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 12/386 (3%)

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           V++   + P+  T N ++    +    +   E  + + K G+  +V  + T I+ + +GG
Sbjct: 208 VLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAFCKGG 266

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             EEA+ L  +M + G++PN V YN+ I  L   G  + A      M+++ + P   TYS
Sbjct: 267 KVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYS 326

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL KGL +   +  A+ +  ++ E+    +   YN LI+ L ++ +L  A ++   M+ +
Sbjct: 327 ILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSK 386

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL     TY TLI GYCK G  + A ++ + M  +    N   + S+I  LC     D+A
Sbjct: 387 GLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSA 446

Query: 519 KS------LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
                   L   S   GLL      TLI+G   +GK ++A  ++ +  N G  V+    N
Sbjct: 447 LRFVGEMLLRNMSPGGGLL-----TTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L++ LC+ G  ++   + K ++  G + D V+Y TL++    N   +E     D+MV  
Sbjct: 502 ALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK 561

Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
           G+ PDN TY+ +I  LL     E+ +
Sbjct: 562 GLKPDNYTYSILIRGLLNMNKVEEAI 587



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 179/374 (47%), Gaps = 24/374 (6%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSVSP-----LEFLEGLLDSYEICKAT----- 145
           S  +++ LL +   FD AL  +G ++  N +SP        + GL    +  KA      
Sbjct: 429 SFTSVICLLCSHHMFDSALRFVGEMLLRN-MSPGGGLLTTLISGLCKHGKHSKAVELWLK 487

Query: 146 ---------PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
                        +AL+    + G  E  + + +++  +G  +   ++N  +S      +
Sbjct: 488 FLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKK 547

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           +   +    EMV  G   +  T++++I  L    K+EEA+  +    ++G+ P+V  +++
Sbjct: 548 LDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSV 607

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I+  C+    E   KLF +M  MS +++ PN+V +N +I  +C+ GR+  A E+R  M 
Sbjct: 608 MIDGCCKAERTEEGQKLFDEM--MS-NNLQPNTVVYNHLIGAYCRSGRLSMALELREDMK 664

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             GI  N  TY +LI G +     EEA  L +EM   GL PN   Y + I      G + 
Sbjct: 665 HKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMV 724

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
               +L +M  K++ P+  TY+++  G  R+G V +A +L +++ E+ +V D+ +Y   I
Sbjct: 725 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFI 784

Query: 437 -NYLCKSNNLAAAK 449
             YL +   L A K
Sbjct: 785 YGYLKQGGVLQAFK 798



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 3/202 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  ++  C +   TE    +  ++       +   +N+ +    +   +    +L ++M
Sbjct: 604 TYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDM 663

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N  T+  +I  +    ++EEA  L   M   G+ PNV  +  +I+   ++G +
Sbjct: 664 KHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQM 723

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                L R+M      +V PN +T+  +I G+ + G V  A  + + M + GI  +  TY
Sbjct: 724 VKVECLLREM---HSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITY 780

Query: 328 ATLIDGYARGGSSEEALRLCDE 349
              I GY + G   +A +  DE
Sbjct: 781 KEFIYGYLKQGGVLQAFKGSDE 802


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 240/475 (50%), Gaps = 5/475 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +NN LS LVK+        L K +   G   ++ T N++I   C   ++  + S+   +L
Sbjct: 72  FNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATIL 131

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P+V+    +I   C  G+++ ALK    +  +       + +++  +ING CK+G
Sbjct: 132 KRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL---DRISYGTLINGLCKIG 188

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             + A ++   + +  I  +V  Y  +ID   +     EA  L  EM  + + PN V Y 
Sbjct: 189 ETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYT 248

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I+     G +  A+ +L++M  K+I PD +T+SIL   L + G +K A  +   +++ 
Sbjct: 249 TLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKA 308

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++  D  +YN L++     N +  AK + +SM   G+ P + +Y  +IDG CK   ++ A
Sbjct: 309 YVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEA 368

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLING 542
           + ++E MK     PN + +NS+I+GLCK   +     L+ +   R  L D ITY++LI+ 
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDA 428

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              N  + +A A+F +M    I  +   Y ILI+ LCK G  + A+E+ + +++ G   D
Sbjct: 429 LCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLD 488

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
             TYT +++ F K    +E + L   M  +G  P+  T++ II  L  EK   D+
Sbjct: 489 IRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALF-EKDENDK 542



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 230/453 (50%), Gaps = 4/453 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
            + L+     +G    ++ V+  +  +G+   +      +  L    E+ +  K + ++V
Sbjct: 107 LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVV 166

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           +  +  +  ++  +I  LCK  + + A+ L   + +  I P+VV +N+II+  C+   + 
Sbjct: 167 ALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVG 226

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A  L+ +M   +   + PN VT+  +I GFC +G +  A  +   M    I+ +V T++
Sbjct: 227 EACNLYSEM---NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFS 283

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LID   + G  + A  +   M+K  + P+ V YNS +   F   +V+ A +V + M   
Sbjct: 284 ILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS 343

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P   +Y+I+  GLC+   V +A  L  ++  ++++ +  ++N LI+ LCKS  +A  
Sbjct: 344 GVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYV 403

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L+  M  R  + D+ITY +LID  CK  +++ A+ +++ M   E +P++  Y  +I+G
Sbjct: 404 WDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDG 463

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK   L  A+ + Q     G  LD  TY  +I+G+   G   EA A+ S+M + G   N
Sbjct: 464 LCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPN 523

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGII 600
            + ++I+I  L +     +A +L++ MI  G++
Sbjct: 524 AITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 239/488 (48%), Gaps = 6/488 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ ++ +  ++     A  + + L  KG +  +   N  ++    L +I   + +   ++
Sbjct: 72  FNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATIL 131

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY  +V T   +I  LC   ++++AL  +  ++      + + +  +IN  C++G+ +
Sbjct: 132 KRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETK 191

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A++L R +      S+ P+ V +N II+  CK   V  A  +   M    I  NV TY 
Sbjct: 192 AAIQLMRNL---EERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYT 248

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI G+   G   EA+ L +EM  + + P+   ++  I  L  EG ++ A  VL+ M+  
Sbjct: 249 TLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKA 308

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           ++ PD  TY+ L  G      VK A  + N + +  +     SY I+I+ LCK+  +  A
Sbjct: 309 YVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEA 368

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L   M  + +IP+ IT+ +LIDG CK G I     + + M+   +  +++ Y+S+I+ 
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDA 428

Query: 509 LCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           LCK+  LD A +L +   +Q I   D  TY  LI+G    G++  A  +F  +   G  +
Sbjct: 429 LCKNCHLDQAIALFKKMITQEIQP-DMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHL 487

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y ++I+  CK G + +A  L+  M  +G IP+ +T+  ++    +    ++  +L 
Sbjct: 488 DIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLL 547

Query: 627 DDMVLSGV 634
            +M+  G+
Sbjct: 548 REMIARGL 555



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 208/416 (50%), Gaps = 4/416 (0%)

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +A++L+ RML     P    FN I++   ++     A+ L + +       +  + VT N
Sbjct: 52  DAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDF---KGITSDLVTLN 108

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +IN FC LG++  +  +   ++K G   +V T  TLI G    G  ++AL+  D++V  
Sbjct: 109 ILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL 168

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
               + + Y + I+ L   G+ + A+ ++ ++ ++ I PD   Y+I+   LC+N  V +A
Sbjct: 169 EFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEA 228

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L++++  + +  +  +Y  LI   C    L  A  LL+ M ++ + PD+ T+  LID 
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
             K G ++ A  V   M K   KP++V YNS+++G      +  AK +  +  + G+   
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 534 I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           + +Y  +I+G      + EA ++F EM++  +  N + +N LI+ LCK G      +L+ 
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            M     + D +TY++L+    KNC  ++ I L   M+   + PD  TY  +I  L
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGL 464



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 155/319 (48%), Gaps = 40/319 (12%)

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+ L   +  +G+  + V  N  I+     G +  +  VL+ ++ +   PD  T + L K
Sbjct: 88  AISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIK 147

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLC  G VK+A K H+ V+                        A   QL           
Sbjct: 148 GLCLRGEVKKALKFHDDVV------------------------ALEFQL----------- 172

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL- 521
           D I+YGTLI+G CK G  + A+Q+  N+++   KP++V+YN II+ LCK+  +  A +L 
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 522 --LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
             + A Q     + +TY TLI G+ I G + EA A+ +EM+   I  +   ++ILI+ L 
Sbjct: 233 SEMNAKQIYP--NVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G  + A+ ++ VM+   + PD VTY +LV  +      +    + + M  SGV+P  Q
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350

Query: 640 TYNAIISPLLGEKSAEDQV 658
           +Y  +I  L   K  ++ +
Sbjct: 351 SYTIMIDGLCKTKMVDEAI 369



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 3/246 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K     +++LV     +   + A  V   +   G +  + ++   +  L K   +     
Sbjct: 311 KPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAIS 370

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L++EM     + N  TFN +I  LCK  ++     L  +M       +V+ ++ +I+  C
Sbjct: 371 LFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALC 430

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   L+ A+ LF+KM       + P+  T+  +I+G CK GR++ A+E+   ++  G   
Sbjct: 431 KNCHLDQAIALFKKMIT---QEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHL 487

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           ++RTY  +I G+ + G  +EAL L  +M   G +PN + ++  I  LF + + + A  +L
Sbjct: 488 DIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLL 547

Query: 383 SDMIDK 388
            +MI +
Sbjct: 548 REMIAR 553


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 222/415 (53%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+   +L   M V SG  V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLDEGFRLKNAMQV-SG--VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 IMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 36/314 (11%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQV 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  MI++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++  S+DA K            
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK------------ 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                  M  EM NVG+      Y ++IN  CK G      +L+
Sbjct: 368 -----------------------MLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404

Query: 592 KVMILHGIIPDYVT 605
           K M   G +P  VT
Sbjct: 405 KEMQRDGYMPSVVT 418



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A  L   M+ +GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 VSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  MI+ G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M V G+ PD+ TY  LI+G CK   ++ A  +++ M      PN V + ++I+G CK+  
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 226/446 (50%), Gaps = 3/446 (0%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR-MLKSGIWPNVVCFNMIINEACQV 264
           +++  G      TF  ++  LC E +  +A+++  R M + G  P+V  +  ++   C  
Sbjct: 169 QIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAE 228

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
              E A +L   M    GD+  PN V++  +I+GF K G V  A  +   M+  GI  NV
Sbjct: 229 KKCEEAAELIHMMA-EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNV 287

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            T  ++IDG  +  + ++A  +  +M+   +MPN   YNS IH   + G    A+ +L +
Sbjct: 288 VTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKE 347

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M      P+  TYS+L   LC++G   +A ++ N +++     +A +Y  L++      N
Sbjct: 348 MSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGN 407

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L     +   M+  G+ P    +   I  YCK G ++ A   +  M++    P++V Y +
Sbjct: 408 LVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTT 467

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+GLCK   LD A S        GL  D IT+NTLI+G+ ++GK  +A  +F EM + G
Sbjct: 468 VIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRG 527

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I  N   +N +I+ L K G   +AR+L  +M   G  P+ V+Y T++  +       EV+
Sbjct: 528 IPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 587

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLL 649
           +L DDM+L G+ P   T+N ++  ++
Sbjct: 588 KLLDDMLLIGLKPTAVTFNTLLDGMV 613



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 237/504 (47%), Gaps = 23/504 (4%)

Query: 143 KATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           +A    F  L+R  C +   ++    V++++   G +  + ++   L  L    +     
Sbjct: 176 RAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAA 235

Query: 202 KLYKEMVSCG--YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
           +L   M   G     NV ++  VI+   KE  + +A +L+ +ML  GI PNVV  N +I+
Sbjct: 236 ELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVID 295

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+V  ++ A  + ++M     + ++PN  T+N +I+G+   G+   A  I   M + G
Sbjct: 296 GLCKVQAMDKAEAVLQQM---IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 352

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
              NV TY+ LID   + G   EA  + + M++ G  PN   Y S +H    EG++    
Sbjct: 353 QRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMN 412

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V   M+   + P    ++I     C+ G + +A    N++ ++  + D  +Y  +I+ L
Sbjct: 413 NVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   L  A      MI  GL PDIIT+ TLI G+   G  E A +++  M      PN+
Sbjct: 473 CKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNV 532

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             +NS+I+ L K+  +  A+ L     R G   + ++YNT+I+GYFI G++ E   +  +
Sbjct: 533 NTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 592

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M  +G+    V +N L++                 M+  G+ PD VT  TL+    ++  
Sbjct: 593 MLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGR 636

Query: 619 PEEVIELHDDMVLSGVSPDNQTYN 642
            E+++ L  +M+      D  T N
Sbjct: 637 IEDILTLFREMLGKADKTDTITEN 660



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 224/514 (43%), Gaps = 23/514 (4%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL-YK 205
           A F  L+  C   G     +  + ++   G       +   L  L           +  +
Sbjct: 145 ATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLR 204

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--IWPNVVCFNMIINEACQ 263
            M   G   +V ++  ++  LC E K EEA  L + M + G    PNVV +  +I+   +
Sbjct: 205 RMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFK 264

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            GD+  A  LF K   M    + PN VT N +I+G CK+  ++ AE +   MI   I  N
Sbjct: 265 EGDVGKAYTLFCK---MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY +LI GY   G   EA+R+  EM + G  PN V Y+  I  L   G    A  + +
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            MI     P+  TY  L  G    G +     + + +++  M    + +NI I   CK  
Sbjct: 382 SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCG 441

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            L  A    + M  +G +PDI+ Y T+IDG CK G ++ A+  +  M      P+++ +N
Sbjct: 442 RLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+G       + A+ L       G+   + T+N++I+  F  GK+ EA  +F  M   
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G   N V YN +I+     G   +  +L+  M+L G+ P  VT+ TL+            
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL------------ 609

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               D MV  G+ PD  T   +I     +   ED
Sbjct: 610 ----DGMVSMGLKPDVVTCKTLIDSCCEDGRIED 639



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 205/427 (48%), Gaps = 16/427 (3%)

Query: 235 ALSLYYRMLKSG---IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           A+S++ RM ++G   + P++  F ++I+  C  G L      F  +G +    +   +VT
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLG---FAALGQIIKTGLRAQAVT 181

Query: 292 HNCIINGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
              ++   C   R   A  I    M + G   +V +Y TL+ G       EEA  L   M
Sbjct: 182 FTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMM 241

Query: 351 VKRG--LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            + G    PN V Y + IH  F EGDV  A  +   M+D  I P+  T + +  GLC+  
Sbjct: 242 AEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ 301

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + +A  +  Q+++EH++ +  +YN LI+    S     A ++L  M   G  P+++TY 
Sbjct: 302 AMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYS 361

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL----DAAKSLLQA 524
            LID  CK G    A +++ +M +  +KPN   Y S+++G   + +L    +    ++Q 
Sbjct: 362 MLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQN 421

Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
             R G      +N  I  Y   G++ EA   F++M+  G   + V Y  +I+ LCK G  
Sbjct: 422 GMRPG---RHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             A      MI  G+ PD +T+ TL+  F+ +   E+  EL  +M+  G+ P+  T+N++
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSM 538

Query: 645 ISPLLGE 651
           I  L  E
Sbjct: 539 IDKLFKE 545



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/445 (22%), Positives = 208/445 (46%), Gaps = 20/445 (4%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E +  + +  + C      +  ++    + G    AY +  K+   G   ++   N+ + 
Sbjct: 236 ELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVID 295

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            L K+  + +   + ++M+    + N  T+N +I+      +  EA+ +   M + G  P
Sbjct: 296 GLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRP 355

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           NVV ++M+I+  C+ G    A ++F  M + SG    PN+ T+  +++G+   G +    
Sbjct: 356 NVVTYSMLIDCLCKSGLHAEAREIFNSM-IQSGQK--PNASTYGSLLHGYATEGNLVDMN 412

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
            ++  M++ G+      +   I  Y + G  +EA    ++M ++G MP+ V Y + I  L
Sbjct: 413 NVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGL 472

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              G ++ A+     MID  + PD  T++ L  G   +G  ++A +L  ++++  +  + 
Sbjct: 473 CKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNV 532

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            ++N +I+ L K   +  A++L   M   G  P++++Y T+I GY   G +   +++ ++
Sbjct: 533 NTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 592

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M  +  KP  V +N++++G+                  +GL  D +T  TLI+    +G+
Sbjct: 593 MLLIGLKPTAVTFNTLLDGMVS----------------MGLKPDVVTCKTLIDSCCEDGR 636

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNI 573
           I +   +F EM       + +  NI
Sbjct: 637 IEDILTLFREMLGKADKTDTITENI 661



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 175/383 (45%), Gaps = 21/383 (5%)

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           L+ ++D + +   T   +++L+      G    A  +++++   G   ++  ++  +  L
Sbjct: 310 LQQMIDEHIMPNCT--TYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCL 367

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K        +++  M+  G   N +T+  +++    E  L +  ++   M+++G+ P  
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGR 427

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN+ I   C+ G L+ A   F KM        +P+ V +  +I+G CK+GR++ A   
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKM---QQQGFMPDIVAYTTVIDGLCKIGRLDDAMSR 484

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              MI  G+  ++ T+ TLI G+A  G  E+A  L  EM+ RG+ PN   +NS I  LF 
Sbjct: 485 FCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFK 544

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           EG V  A  +   M      P+  +Y+ +  G    G V +  KL + +L   +   A +
Sbjct: 545 EGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVT 604

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +N L                L  M+  GL PD++T  TLID  C+ G IE  + ++  M 
Sbjct: 605 FNTL----------------LDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREML 648

Query: 492 KVEKKPNLVIYNSIINGLCKDAS 514
               K + +  N  + G+   AS
Sbjct: 649 GKADKTDTITENIKLRGVTVKAS 671



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 33/267 (12%)

Query: 118 GNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH 177
           GNL+  N+V  L    G+       +    VF+  + A  + G  + A     K++ +G 
Sbjct: 406 GNLVDMNNVKDLMVQNGM-------RPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGF 458

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
              I A+   +  L K+  +      + +M+  G   ++ TFN +I+      K E+A  
Sbjct: 459 MPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEE 518

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L+Y M+  GI PNV  FN +I++  + G +  A KLF    +M      PN V++N +I+
Sbjct: 519 LFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLF---DLMPRAGAKPNVVSYNTMIH 575

Query: 298 GFCKLGRVEFAEEIRY---------------------AMIKAGIDCNVRTYATLIDGYAR 336
           G+   G  E  E ++                       M+  G+  +V T  TLID    
Sbjct: 576 GYFIAG--EVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCE 633

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYN 363
            G  E+ L L  EM+ +    + +  N
Sbjct: 634 DGRIEDILTLFREMLGKADKTDTITEN 660


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 235/473 (49%), Gaps = 24/473 (5%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M+      +V  F  ++ +L K       +SL+Y++  +GI PN+V  +++IN  C 
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 118

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           +G + FA  +F K+  M      PN++T   ++ GFC   +V+ A      ++  G   N
Sbjct: 119 LGQMRFAFSIFAKILKMGYH---PNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFN 175

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y TLI+G  + G +  AL++  ++  + +  + V+Y++ I  L  +  V  A  + S
Sbjct: 176 QVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYS 235

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +MI K I P   T + L  G C  G  K+AF L  +++ +++  D Y++NIL++ LCK  
Sbjct: 236 EMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEG 295

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE-------NMKKVEKK 496
            +  AK  ++ M+  G++PD++TY +L+DGYC    +  A  VY         +K V+K 
Sbjct: 296 KIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKA 355

Query: 497 -------------PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
                        P+ V YNS+I+GLCK   +  A  L+   +  G   D ITYN+LI+ 
Sbjct: 356 LSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDA 415

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              N  + +A A+  ++++ GI ++   YNILI+ LCK G  + A+ + + +++ G    
Sbjct: 416 LCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLT 475

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             TYT ++          E   L   M  +G  PD  T   II  L      E
Sbjct: 476 VWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNE 528



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 230/463 (49%), Gaps = 24/463 (5%)

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRF-WKLYKEMVSCGYVENVNTFNLVIYALCKECKL 232
           +K + VS+    N   HL ++    RF + ++ +++  GY  N  T   ++   C   K+
Sbjct: 102 IKPNIVSLSILINCYCHLGQM----RFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKV 157

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +EAL  +  +L  G   N V +  +IN  C++G+   AL++ R+   + G  V  + V +
Sbjct: 158 KEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQ---IEGKLVSTDVVMY 214

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           + II+G CK   V  A E+   MI   I   V T  +LI GY   G  +EA  L  EMV 
Sbjct: 215 STIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVL 274

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           + + P+   +N  +  L  EG ++ A   ++ M+ + + PD  TYS L  G C    V +
Sbjct: 275 KNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNK 334

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A                + Y+I+IN  CK   +  A  L   M  R + PD +TY +LID
Sbjct: 335 A---------------KHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLID 379

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           G CK G I  A ++ + M+   +  +++ YNS+I+ LCK+  +D A +L++  +  G+ L
Sbjct: 380 GLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQL 439

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D  TYN LI+G    G++ +A  +F ++   G  +    Y I+IN LC  G   +A  L+
Sbjct: 440 DMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLL 499

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
             M  +G +PD VT  T++    +N   E   +L  +M+  G+
Sbjct: 500 SKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 542



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 207/425 (48%), Gaps = 17/425 (4%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +++ +S ++RML     P+V+ F  I++   ++      + LF ++     + + PN V+
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEF---NGIKPNIVS 108

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            + +IN +C LG++ FA  I   ++K G   N  T  TL+ G+      +EAL   D ++
Sbjct: 109 LSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVL 168

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             G   N V Y + I+ L   G+   AL +L  +  K +  D   YS +  GLC++  V 
Sbjct: 169 ALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVN 228

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A++L+++++ + +     + N LI   C       A  LL  M+++ + PD+ T+  L+
Sbjct: 229 DAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILV 288

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D  CK G I+ A      M K    P++V Y+S+++G C    ++ AK +          
Sbjct: 289 DALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------- 338

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
               Y+ +ING+     + +A ++F EMR   IA + V YN LI+ LCK G    A EL+
Sbjct: 339 ----YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELV 394

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M   G   D +TY +L+    KN   ++ I L   +   G+  D  TYN +I  L  +
Sbjct: 395 DEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQ 454

Query: 652 KSAED 656
              +D
Sbjct: 455 GRLKD 459



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 188/383 (49%), Gaps = 18/383 (4%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  L+    +IG T  A  ++++++ K  S  +  ++  +  L K   +   ++LY EM+
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 238

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           +      V T N +IY  C   + +EA  L   M+   I P+V  FN++++  C+ G ++
Sbjct: 239 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 298

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A      + VM  + V+P+ VT++ +++G+C +  V  A+ +               Y+
Sbjct: 299 EAKS---GIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YS 340

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I+G+ +    ++AL L  EM  R + P+ V YNS I  L   G +  A  ++ +M D 
Sbjct: 341 IVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDS 400

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
               D  TY+ L   LC+N  V +A  L  ++ ++ +  D Y+YNILI+ LCK   L  A
Sbjct: 401 GQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDA 460

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           + +   ++++G    + TY  +I+G C  G +  A  +   M+     P+ V   +II  
Sbjct: 461 QVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRA 520

Query: 509 LCKDASLDAAKSLLQASQRIGLL 531
           L ++   + A+ LL+     GLL
Sbjct: 521 LFENDKNERAEKLLREMIARGLL 543



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 18/259 (6%)

Query: 112 DALLLMGNLMSANSVSPLEFLEG----------LLDSY----EICKATPAVFDALVRACT 157
           DAL   G +  A S   +   EG          L+D Y    E+ KA   V+  ++    
Sbjct: 289 DALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKA-KHVYSIVINGFC 347

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           +I   + A  +  +++ +  +     +N+ +  L K   I   W+L  EM   G   ++ 
Sbjct: 348 KIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADII 407

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N +I ALCK   +++A++L  ++   GI  ++  +N++I+  C+ G L+ A  +F+ +
Sbjct: 408 TYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDL 467

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            +   +  +    T+  +ING C  G +  AE +   M   G   +  T  T+I      
Sbjct: 468 LIKGYNLTV---WTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFEN 524

Query: 338 GSSEEALRLCDEMVKRGLM 356
             +E A +L  EM+ RGL+
Sbjct: 525 DKNERAEKLLREMIARGLL 543


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       JL++     + 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        + HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  +  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L   M ++GL PD ITY TLID
Sbjct: 260 AMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 141/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y  M      P+L+ YN++I GLCK   L  A+ L       GL  D ITY TLI
Sbjct: 259 LAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 153/294 (52%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR---LDXVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M + G+ PD +TYTTL+    K    E   E    M+   +  D   Y A+IS L 
Sbjct: 298 LXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  +     SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYXQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI  ++  LS++ K         L+  M  CG   ++ T+N+VI  LC+  +   ALS+ 
Sbjct: 68  SIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVV 127

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M+K G  P+VV  + +IN  CQ   +  A+ L  KM  M       + V +N II+GF
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK---LDVVIYNTIIDGF 184

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G V  A  +   M + G+  +  TY +L+ G    G   +A RL  +MV R ++PN 
Sbjct: 185 CKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNV 244

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           + + + I+    EG    A     +MI + I PD FTY+ +  GLC +G V +A ++ + 
Sbjct: 245 ITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDL 304

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           ++ +    D  +YN LIN  CK+  +    +L+  M  RGL+ D +T+ T+I GY + G 
Sbjct: 305 MVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
            + A +++  M     +PN+  Y+ ++ GLC +  ++ A  L ++ Q+  + LD  TYN 
Sbjct: 365 PDAAQEIFSRMG---SRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNI 421

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I+G  + G + +A+ +F  +   G+  + V Y  +I+  C+   + +A  L + M   G
Sbjct: 422 VIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481

Query: 599 IIP 601
           ++P
Sbjct: 482 LLP 484



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 219/435 (50%), Gaps = 7/435 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+  M+    + ++  F+ ++  + K    +  +SL++ M   GI  ++  +N++IN  C
Sbjct: 56  LFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLC 115

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +      AL +  KM     +   P+ VT + +INGFC+  RV  A ++   M +     
Sbjct: 116 RCSRFVIALSVVGKMMKFGYE---PDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKL 172

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V  Y T+IDG+ + G    AL L   M + G+  + V YNS +  L   G    A  ++
Sbjct: 173 DVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLM 232

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            DM+ + I P+  T++ L     R G   +A K + +++   +  D ++YN +I+ LC  
Sbjct: 233 RDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMH 292

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  AKQ+L  M+ +G  PD++TY TLI+G+CK   ++   ++   M +     + V +
Sbjct: 293 GQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTF 352

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
           N+II G  +    DAA+ +     R+G    I TY+ L+ G   N ++ +A  +F  M+ 
Sbjct: 353 NTIIQGYFQAGRPDAAQEIF---SRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQK 409

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             + ++   YNI+I+ +C  G  + A +L   +   G+ PD VTYTT+++ F +    ++
Sbjct: 410 SEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDK 469

Query: 622 VIELHDDMVLSGVSP 636
              L+  M   G+ P
Sbjct: 470 ADFLYRKMQEDGLLP 484



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 191/401 (47%), Gaps = 23/401 (5%)

Query: 92  HSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA 151
           H L +   +++ L    RF  AL ++G +M       +  +  L++ +  C+    VF  
Sbjct: 102 HDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF--CQGN-RVF-- 156

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
                       GA D++ K++     + +  +N  +    K   +     L+  M   G
Sbjct: 157 ------------GAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDG 204

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              +  T+N ++  LC   +  +A  L   M+   I PNV+ F  +IN   + G    A 
Sbjct: 205 VRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAK 264

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           K + +M     D   P+  T+N +I+G C  G+V+ A++I   M+  G   +V TY TLI
Sbjct: 265 KFYEEMIRRCID---PDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLI 321

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           +G+ +    +E  +L  EM +RGL+ + V +N+ I   F  G  + A  + S M  +   
Sbjct: 322 NGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR--- 378

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TYSIL  GLC N  V++A  L   + +  M  D  +YNI+I+ +C   N+  A  L
Sbjct: 379 PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDL 438

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
             S+  +GL PD++TY T+I G+C+    + A  +Y  M++
Sbjct: 439 FCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQE 479



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 195/426 (45%), Gaps = 42/426 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           L+EA+ L+  M++S   P++V F+ +++   +  + +  + LF  M +     +  +  T
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICG---IGHDLYT 106

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +IN  C+  R   A                                   L +  +M+
Sbjct: 107 YNIVINCLCRCSRFVIA-----------------------------------LSVVGKMM 131

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K G  P+ V  +S I+       V GA+ ++S M +     D   Y+ +  G C+ G V 
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVN 191

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A  L  ++  + +  D  +YN L+  LC S   + A +L+  M++R ++P++IT+  LI
Sbjct: 192 NALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALI 251

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           + + + G    A + YE M +    P++  YNS+I+GLC    +D AK +L      G  
Sbjct: 252 NAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCF 311

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D +TYNTLING+    ++ E   +  EM   G+ V+ V +N +I    + G    A+E+
Sbjct: 312 PDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEI 371

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              M   G  P+  TY+ L+     N   E+ + L + M  S +  D  TYN +I  +  
Sbjct: 372 FSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCM 428

Query: 651 EKSAED 656
             + ED
Sbjct: 429 IGNVED 434



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 150/286 (52%), Gaps = 5/286 (1%)

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL-HNQVLEEHMVG-DAYS 431
           +++ A+ +  +MI     P    +S L   + ++        L HN  +E   +G D Y+
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHN--MEICGIGHDLYT 106

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           YNI+IN LC+ +    A  ++  M+  G  PD++T  +LI+G+C+G  + GAV +   M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
           ++  K ++VIYN+II+G CK   ++ A  L    +R G+  D +TYN+L+ G   +G+ +
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +A  +  +M    I  N + +  LIN   + G + +A++  + MI   I PD  TY +++
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMI 286

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                +   +E  ++ D MV  G  PD  TYN +I+     K  ++
Sbjct: 287 HGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDE 332



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 3/249 (1%)

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
           TK L  N  + +A  L   +++   +     ++ L++ + KS N      L  +M + G+
Sbjct: 43  TKRLSMN--LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGI 100

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
             D+ TY  +I+  C+      A+ V   M K   +P++V  +S+ING C+   +  A  
Sbjct: 101 GHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVD 160

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L+   + +   LD + YNT+I+G+   G +  A  +F  M   G+  + V YN L+  LC
Sbjct: 161 LVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLC 220

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G    A  LM+ M++  I+P+ +T+T L+  F +     E  + +++M+   + PD  
Sbjct: 221 CSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVF 280

Query: 640 TYNAIISPL 648
           TYN++I  L
Sbjct: 281 TYNSMIHGL 289



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 141/284 (49%), Gaps = 6/284 (2%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +A    +++LV      G    A  +++ + ++    ++  +   ++  V+  +     K
Sbjct: 206 RADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKK 265

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            Y+EM+      +V T+N +I+ LC   +++EA  +   M+  G +P+VV +N +IN  C
Sbjct: 266 FYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFC 325

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +   ++   KL R+   MS   ++ ++VT N II G+ + GR + A+EI   M   G   
Sbjct: 326 KTKRVDEGTKLVRE---MSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRP 379

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+RTY+ L+ G       E+AL L + M K  +  +   YN  IH +   G+VE A  + 
Sbjct: 380 NIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLF 439

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             +  K + PD  TY+ +  G CR     +A  L+ ++ E+ ++
Sbjct: 440 CSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLL 483


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 229/474 (48%), Gaps = 38/474 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ ++    + G  E A  ++  +++   + S   +N  ++ L++   + +  
Sbjct: 276 CLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF-TYNPLITALLERGFVQKVE 334

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L  EM + G +  + T+N +I+ L K  ++E A   +  M   G+ P+++ +N ++N  
Sbjct: 335 ALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGY 394

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G+L+ AL L   +G +    + P  +T+N +I+G+C+LG +E A  ++  M++ G  
Sbjct: 395 CKAGNLKEALWL---LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCF 451

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY  L++G  +  +   A    DEM+ +GL P+   YN+ I      GD   A  +
Sbjct: 452 PDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQL 511

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+ K I PD  TY+++  GLC+ G +K A  L  +++ + +  D  +Y  LI+  C+
Sbjct: 512 REVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCE 571

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L+ A++LL+ M+  GL P ++TY  LI   C+ GN+  A   +  M  V  +PN + 
Sbjct: 572 RGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEIT 631

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           YN +I+ LC+                                   G+   A+  F EM  
Sbjct: 632 YNVLIHALCR----------------------------------TGRTLLAYHHFHEMLE 657

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            G+A NK  Y +LI+  C+ G +  A  L   M  +GI PDY T+  L   F K
Sbjct: 658 RGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDK 711



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 237/469 (50%), Gaps = 9/469 (1%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVS--CGYVENVNTFNLVIYALCKECKLEEALS 237
           +I  +N  L   +K         L KEM +   G + N  T+N+VI  L +E  LE A  
Sbjct: 242 TIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAK 301

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L   M  S    +   +N +I    + G   F  K+      M  + ++P  VT+N II+
Sbjct: 302 LVDSMRLSKKASSFT-YNPLITALLERG---FVQKVEALQMEMENEGIMPTLVTYNAIIH 357

Query: 298 GFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           G  K  +VE A ++++A ++A G+  ++ TY ++++GY + G+ +EAL L  ++ + GL 
Sbjct: 358 GLLKSEQVE-AAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLA 416

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P  + YN+ I      G +E A  +  +M+++   PD  TY+IL  G  +   +  A + 
Sbjct: 417 PTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREF 476

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
            +++L + +  D ++YN  I       +   A QL   M+++G+ PD +TY  +IDG CK
Sbjct: 477 FDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCK 536

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-T 535
            GN++ A  +   M     +P+ + Y  +I+  C+   L  A+ LL      GL  ++ T
Sbjct: 537 TGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVT 596

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y  LI+     G +  A+  F +M +VGI  N++ YN+LI+ LC+ G    A      M+
Sbjct: 597 YTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEML 656

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             G+ P+  TYT L+    +  +  + I L+ +M  +G+ PD  T+NA+
Sbjct: 657 ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNAL 705



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 190/379 (50%), Gaps = 9/379 (2%)

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L  FR   V++   V P+    NC++       R +    +   M++  I+  + TY TL
Sbjct: 193 LAAFR---VVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTL 249

Query: 331 IDGYARGGSSEEALRLCDEMVKR--GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM-ID 387
           +D + + G  +EA  L  EM  +  G + N+V YN  I +L  EG +E A  ++  M + 
Sbjct: 250 LDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLS 309

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K      FTY+ L   L   G V++   L  ++  E ++    +YN +I+ L KS  + A
Sbjct: 310 KKA--SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEA 367

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+   + M   GL+PD+ITY ++++GYCK GN++ A+ +  ++++    P ++ YN++I+
Sbjct: 368 AQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           G C+   L+ A+ L +     G   D  TY  L+NG      +  A   F EM + G+  
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   YN  I      G   +A +L +VM+L GI PD VTY  ++    K  + ++  +L 
Sbjct: 488 DCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLK 547

Query: 627 DDMVLSGVSPDNQTYNAII 645
             MV  G+ PD  TY  +I
Sbjct: 548 MKMVSDGLQPDCITYTCLI 566



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 120/235 (51%), Gaps = 6/235 (2%)

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG---LIPDIITYGTLID 472
           ++ ++L+  +     +YN L++   K      A  LL  M  +G   L+ D+ TY  +I 
Sbjct: 230 VYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDV-TYNVVIS 288

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
              + G++E A ++ ++M+ + KK +   YN +I  L +   +   ++L    +  G++ 
Sbjct: 289 FLAREGHLENAAKLVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMP 347

Query: 533 A-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
             +TYN +I+G   + ++  A   F+EMR +G+  + + YN ++N  CK G  ++A  L+
Sbjct: 348 TLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLL 407

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
             +   G+ P  +TY TL+  + +    EE   L ++MV  G  PD  TY  +++
Sbjct: 408 GDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMN 462



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 3/124 (2%)

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIA--VNKVGYNILINFLCKFGCYQQARELM 591
           +TYNTL++ +   G+  EA  +  EM   G    +N V YN++I+FL + G  + A +L+
Sbjct: 244 VTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLV 303

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
             M L      + TY  L+T   +    ++V  L  +M   G+ P   TYNAII  LL  
Sbjct: 304 DSMRLSKKASSF-TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKS 362

Query: 652 KSAE 655
           +  E
Sbjct: 363 EQVE 366


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 211/415 (50%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N  F H+L + C ++H L   +   +A  L+  ++S     S       +L +    ++ 
Sbjct: 6   NXTFRHTLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A    +  K     V        L HL+KL      W  YK
Sbjct: 66  IYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN+V++  CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +V+ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLID + + G  + A+ +  +M+ +G  P+ + YN+ I+ L  +GD++    ++ +M
Sbjct: 243 TFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               + PD  TY+ L  G C+ G ++ AF+   ++++E +  D  +Y  L++ LC+    
Sbjct: 303 SMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRA 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++   M+  GL PD  TY  +I+ +CK G++  A ++ + M++    P +V
Sbjct: 363 DDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVV 417



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 140 NIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  V+ A  + ++M+D+ + P+  T++ L    C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDS 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L +    D  +YN LI  LCK  +L   + L+  M + GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M K   + + V Y ++++GLC++   D A+ + +    +GL  
Sbjct: 320 GCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +   G +  A  +  EM+  G
Sbjct: 380 DNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 162/304 (53%), Gaps = 11/304 (3%)

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           +F +EI    ++ G   ++  +  ++  + + G    A  + D + K GL P+ V +N+ 
Sbjct: 122 DFYKEI----LECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTL 177

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           ++     GD++    + S M    + PD +TYS+L  GLC+   V +A +L N++L+  +
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGL 237

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
           V +  ++  LI+  CK+  + +A ++   M+ +G  PD+ITY TLI G CK G+++    
Sbjct: 238 VPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRA 297

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLIN 541
           + + M     KP+ + Y ++I+G CK+  L+ A    K +++ S R   LD + Y  L++
Sbjct: 298 LIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIR---LDNVAYTALVS 354

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G    G+  +A  MF EM +VG+  +   Y ++IN  CK G  + A  L+K M   G +P
Sbjct: 355 GLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414

Query: 602 DYVT 605
             VT
Sbjct: 415 CVVT 418



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 148/289 (51%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  R G
Sbjct: 126 EILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A +L + M+ RGL+P+ +T+ 
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLID +CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L   ++L+      
Sbjct: 246 TLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF     M    I ++ V Y  L++ LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++ + M+  G+ PD  TYT ++  F K         L  +M   G  P
Sbjct: 366 EKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NI+++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWDFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+ +  NG +  A  ++ +M + G + + + YN LI  LCK G  +Q R 
Sbjct: 238 VPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRA 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M ++G+ PD +TYTTL+    K    E   E    M+   +  DN  Y A++S L 
Sbjct: 298 LIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLC 357

Query: 650 GEKSAED 656
            E  A+D
Sbjct: 358 QEGRADD 364



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++I+    C+ G +++A  + + + +  +     S+N L+N   +  +L    +L S+
Sbjct: 137 YFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A +++  M      PN V + ++I+  CK+  
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGM 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D+A  + +     G   D ITYNTLI G    G + +  A+  EM   G+  +K+ Y  
Sbjct: 257 VDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A E  K MI   I  D V YT LV+   +    ++  ++  +M+  G
Sbjct: 317 LIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + PDN TY  II+
Sbjct: 377 LKPDNGTYTMIIN 389


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 215/412 (52%), Gaps = 4/412 (0%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAV 148
           F H+L S C ++H L   +   +A  L+  ++S     S       +L++    ++   V
Sbjct: 1   FRHTLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYV 60

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+ A  + G    A +  +  +     V        L HL+KL      W  YKE++
Sbjct: 61  FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEIL 120

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
            CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN ++N   ++GDL+
Sbjct: 121 ECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 180

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
                FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ 
Sbjct: 181 EG---FRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFT 237

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLIDG+ + G  + A+ +  +M+ + L  + + YN+ I+ L  +GD++ A  ++ +M  K
Sbjct: 238 TLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMK 297

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD  TY+ L  G C+ G ++ AF+   ++++E++  D   Y  LI+ LC+      A
Sbjct: 298 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDA 357

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 358 EKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 409



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 152/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A  +  A+ K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 132 NILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 191

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++GA  +  +M+DK + P+  T++ L  G C+NG V  
Sbjct: 192 SGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDL 251

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 252 AMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLID 311

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M +   + + V+Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 312 GCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKP 371

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +   G +     +  EM+  G
Sbjct: 372 DTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 403



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 151/289 (52%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  R G
Sbjct: 118 EILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLG 177

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK + +  A +L   M+ +GL+P+ +T+ 
Sbjct: 178 DLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFT 237

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A+++Y+ M       +L+ YN++I GLCK   L  A++L+   +  
Sbjct: 238 TLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMK 297

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    A
Sbjct: 298 GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDA 357

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F K        +L  +M   G  P
Sbjct: 358 EKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 406



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 157/295 (53%), Gaps = 7/295 (2%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD
Sbjct: 119 ILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGD 178

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + S M    + PD +TYS+L  GLC+   +  A +L +++L++ +V +  ++  
Sbjct: 179 LDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTT 238

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK+  +  A ++   M+ + L  D+ITY TLI G CK G+++ A  + + M+   
Sbjct: 239 LIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKG 298

Query: 495 KKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
            KP+ + Y ++I+G CK+  L+ A    K ++Q + R   LD + Y TLI+G    G+  
Sbjct: 299 LKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIR---LDDVVYTTLISGLCQEGRSV 355

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +A  M  EM +VG+  +   Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 356 DAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 110 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTL 169

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 170 MNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGL 229

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA+ 
Sbjct: 230 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQN 289

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y  +IS L 
Sbjct: 290 LIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLC 349

Query: 650 GEKSAED 656
            E  + D
Sbjct: 350 QEGRSVD 356



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 132/254 (51%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   +  +L    +L S+
Sbjct: 129 YFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSA 188

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   I+GA ++++ M      PN V + ++I+G CK+  
Sbjct: 189 MHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 248

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EMR  G+  +K+ Y 
Sbjct: 249 VDLAMEIYKQMLSQSLSA-DLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYT 307

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YTTL++   +     +  ++  +M+  
Sbjct: 308 TLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSV 367

Query: 633 GVSPDNQTYNAIIS 646
           G+ PD  TY  II+
Sbjct: 368 GLKPDTGTYTMIIN 381


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 286/582 (49%), Gaps = 28/582 (4%)

Query: 72  KSPKLALEFYTWVGENNRFSHSLESSCAIV--HLLVNWRRFDDALLLMGNLMSANSVSPL 129
           K+P+ A   +     +  ++HS     A+V  H+L   RR  +  ++       N VS +
Sbjct: 21  KNPRAAFALFDSATRHPGYAHS-----AVVYHHIL---RRLSETRMV-------NHVSRI 65

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK-VKGHSVSIHAWNNFL 188
                L+ S E CK    V  ++++   +    + A DV ++++ + G   +I ++N  L
Sbjct: 66  V---ELIRSQE-CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           +  V+  +  +   L+    + G   N+ T+N++I   CK+ + E+A      M K G  
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+V  ++ +IN+  + G L+ AL+LF +M   S   V P+   +N +I+GF K    + A
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEM---SERGVAPDVTCYNILIDGFLKEKDHKTA 238

Query: 309 EEIRYAMIK-AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
            E+   +++ + +  NV+T+  +I G ++ G  ++ L++ + M +     +   Y+S IH
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G+V+ A  V +++ ++    D  TY+ +  G CR G +K++ +L  +++E     
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSV 357

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  SYNILI  L ++  +  A  +   M  +G   D  TYG  I G C  G +  A+ V 
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
           + ++      ++  Y SII+ LCK   L+ A +L++   + G+ L++   N LI G   +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
            ++ EA     EM   G     V YNILI  LCK G + +A   +K M+ +G  PD  TY
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           + L+    ++   +  +EL    + SG+  D   +N +I  L
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 246/557 (44%), Gaps = 43/557 (7%)

Query: 132 LEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           +E L   +E     P    ++ L++   +    E A   +  +  +G    + +++  ++
Sbjct: 133 VESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIW 248
            L K  ++    +L+ EM   G   +V  +N++I    KE   + A+ L+ R+L+ S ++
Sbjct: 193 DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PNV   N++I+   + G ++  LK++ +M     +  L    T++ +I+G C  G V+ A
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL---YTYSSLIHGLCDAGNVDKA 309

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
           E +   + +     +V TY T++ G+ R G  +E+L L   M  +  + N V YN  I  
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKG 368

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L   G ++ A  +   M  K    D  TY I   GLC NG V +A  +  +V       D
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSM--------------IVRGLI------------- 461
            Y+Y  +I+ LCK   L  A  L+  M              ++ GLI             
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488

Query: 462 --------PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
                   P +++Y  LI G CK G    A    + M +   KP+L  Y+ ++ GLC+D 
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548

Query: 514 SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  L     + GL  D + +N LI+G    GK+ +A  + + M +     N V YN
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            L+    K G   +A  +   M   G+ PD ++Y T++            +E  DD    
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH 668

Query: 633 GVSPDNQTYNAIISPLL 649
           G+ P   T+N ++  ++
Sbjct: 669 GIFPTVYTWNILVRAVV 685



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 8/390 (2%)

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL +F++M  + G    P   ++N ++N F +  +    E +      AG+  N++TY  
Sbjct: 97  ALDVFKRMREIFG--CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LI    +    E+A    D M K G  P+   Y++ I+ L   G ++ AL +  +M ++ 
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV-GDAYSYNILINYLCKSNNLAAA 448
           + PD   Y+IL  G  +    K A +L +++LE+  V  +  ++NI+I+ L K   +   
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            ++   M       D+ TY +LI G C  GN++ A  V+  + + +   ++V YN+++ G
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            C+   +  +  L +  +    ++ ++YN LI G   NGKI EA  ++  M   G A +K
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             Y I I+ LC  G   +A  +M+ +   G   D   Y +++    K    EE   L  +
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454

Query: 629 MVLSGVSPDNQTYNAIISPL-----LGEKS 653
           M   GV  ++   NA+I  L     LGE S
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEAS 484



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 219/492 (44%), Gaps = 26/492 (5%)

Query: 54  MAPSLT--NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD 111
           +AP +T  N L++  + E  K  K A+E +  + E++    ++++   ++  L    R D
Sbjct: 215 VAPDVTCYNILIDGFLKE--KDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           D L +   +        L                   + +L+      G  + A  V  +
Sbjct: 273 DCLKIWERMKQNEREKDL-----------------YTYSSLIHGLCDAGNVDKAESVFNE 315

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           L  +  S+ +  +N  L    +  +I    +L++ M     V N+ ++N++I  L +  K
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGK 374

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           ++EA  ++  M   G   +   + + I+  C  G +  AL + +++    G     +   
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH---LDVYA 431

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  II+  CK  R+E A  +   M K G++ N      LI G  R     EA     EM 
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K G  P  V YN  I  L   G    A   + +M++    PD  TYSIL  GLCR+  + 
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A +L +Q L+  +  D   +NILI+ LC    L  A  ++++M  R    +++TY TL+
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           +G+ K G+   A  ++  M K+  +P+++ YN+I+ GLC    +  A      ++  G+ 
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671

Query: 532 DAI-TYNTLING 542
             + T+N L+  
Sbjct: 672 PTVYTWNILVRA 683



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 2/171 (1%)

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI-GLLDAI-TYNTLING 542
           ++ E ++  E K +  +  S+I    K++  D A  + +  + I G   AI +YNTL+N 
Sbjct: 64  RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA 123

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           +    +  +  ++F+     G+A N   YN+LI   CK   +++AR  +  M   G  PD
Sbjct: 124 FVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD 183

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
             +Y+T++   +K    ++ +EL D+M   GV+PD   YN +I   L EK 
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 285/588 (48%), Gaps = 60/588 (10%)

Query: 108 RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYD 167
            R D  L ++G L+  N + P +F      SY           +L+    + G  + A+ 
Sbjct: 114 HRPDLGLAIVGRLLK-NGLGPDDF------SY-----------SLIYGFVKDGEVDKAHC 155

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +  ++  +G    I   N+ +  L K+ E+ +   + ++MV  G   ++ T++L+I  LC
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K   +++A  +  +M+++G  PN + +N +I+     G    ++++F++M   S   V+P
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM---SSCGVIP 272

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT------------------ 329
                N  I+   K GR   A+ I  +M+  G   ++ +Y+T                  
Sbjct: 273 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 332

Query: 330 -------------------LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
                              LI+ YAR G  ++A+ + ++M  +G++P+ V + + I  L 
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 392

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G ++ AL   + M+D  + P    Y  L +G C +G + +A +L ++++ + +     
Sbjct: 393 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 452

Query: 431 SY-NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            Y + +IN LCK   +A  K ++  M+  G  P+++T+ +L++GYC  GN+E A  + + 
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M  +  +PN  IY ++++G CK+  +D A ++ +     G+   ++ Y+ +++G F   +
Sbjct: 513 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 572

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
              A  MF EM   G  V+   Y +++  LC+  C  +A  L++ +    +  D +T+  
Sbjct: 573 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 632

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +++   K    +E  EL D +   G+ P+ QTY+ +I+ L+ E+S E+
Sbjct: 633 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 680



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 220/473 (46%), Gaps = 43/473 (9%)

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           ++T+N++I    +  + +  L++  R+LK+G+ P+   +++I     + G+++ A  LF 
Sbjct: 100 IHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDKAHCLFL 158

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M       VLP  +  N II   CK+  ++ AE I   M+ +GI  ++ TY+ +IDG  
Sbjct: 159 EM---MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH-------W-------------------- 368
           +  + ++A R+ ++MV+ G  PN++ YNS IH       W                    
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275

Query: 369 --------LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG--LCRNGCVKQAFKLHN 418
                   LF  G    A  +   M+ K   PD  +YS +  G     + C+     + N
Sbjct: 276 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            +L + +  + + +NILIN   +   +  A  +   M  +G+IPD +T+ T+I   C+ G
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITY 536
            ++ A+  + +M  +   P+  +Y  +I G C    L  AK L+    ++ I       +
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 455

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           +++IN     G++AE   +   M   G   N V +N L+   C  G  ++A  L+  M  
Sbjct: 456 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 515

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            GI P+   Y TLV  + KN   ++ + +  DM+  GV P +  Y+ I+  L 
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 568



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 4/377 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  + G  + A  + + ++ KG       +   +S L ++  +      +  M
Sbjct: 348 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 407

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVGD 266
           V  G   +   +  +I   C   +L +A  L   M+   I P  V  F+ IIN  C+ G 
Sbjct: 408 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 467

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +    K    M V +G    PN VT N ++ G+C +G +E A  +  AM   GI+ N   
Sbjct: 468 VAEG-KDIMDMMVQTGQR--PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 524

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY + G  ++AL +  +M+ +G+ P +V+Y+  +H LF       A  +  +MI
Sbjct: 525 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 584

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +        TY ++  GLCRN C  +A  L  ++   ++  D  ++NI+I+ + K     
Sbjct: 585 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 644

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK+L  ++   GL+P+I TY  +I    K  + E A  ++ +++K     +  + N I+
Sbjct: 645 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 704

Query: 507 NGLCKDASLDAAKSLLQ 523
             L   A +  A + L 
Sbjct: 705 RMLLNKAEVAKASNYLS 721



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 192/398 (48%), Gaps = 40/398 (10%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P   T+N +I+ + ++ R +    I   ++K G+  +  +Y +LI G+ + G  ++A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 156

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             EM+++G++P  ++ NS I  L    +++ A  ++  M+D  I PD FTYS++  GLC+
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNIL------------------------------- 435
           +  + +A ++  Q++E     ++ +YN L                               
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 436 ----INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN--IEGAVQVYEN 489
               I+ L K      AK +  SM+++G  PDII+Y T++ GY    +  +     ++  
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M      PN  ++N +IN   +   +D A  + +  Q  G++ D +T+ T+I+     G+
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY-T 607
           + +A   F+ M ++G+  ++  Y  LI   C  G   +A+EL+  M+   I P  V Y +
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +++    K     E  ++ D MV +G  P+  T+N+++
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLM 494



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 37/261 (14%)

Query: 423 EHMVGDAYSYNILIN----------------------------------YLCKSNNLAAA 448
            H     ++YNILI+                                     K   +  A
Sbjct: 94  RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 153

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L   M+ +G++P I+   ++I   CK   ++ A  + + M      P+L  Y+ II+G
Sbjct: 154 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK  ++D A+ +L+     G   ++ITYN+LI+GY I+G   E+  +F +M + G+   
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP--EEVIEL 625
               N  I+ L K G   +A+ +   M+L G  PD ++Y+T++  ++        +V  +
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 333

Query: 626 HDDMVLSGVSPDNQTYNAIIS 646
            + M+  G++P+   +N +I+
Sbjct: 334 FNLMLTKGIAPNKHVFNILIN 354



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 21/188 (11%)

Query: 91  SHSLESSCAIVHLLVNWR----RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           S  +E +C I   LV+      R DDAL +  +++                 ++  K T 
Sbjct: 515 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML-----------------HKGVKPTS 557

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            ++  ++    Q   T  A  +  ++   G +VSIH +   L  L + N       L ++
Sbjct: 558 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 617

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           + +     ++ TFN+VI A+ K  + +EA  L+  +   G+ PN+  ++M+I    +   
Sbjct: 618 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 677

Query: 267 LEFALKLF 274
            E A  LF
Sbjct: 678 YEEADNLF 685



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 1/121 (0%)

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN LI+ Y    +     A+   +   G+  +   Y+++  F+ K G   +A  L   M
Sbjct: 102 TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCLFLEM 160

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  G++P  +   +++    K    ++   +   MV SG++PD  TY+ II  L   K+ 
Sbjct: 161 MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 220

Query: 655 E 655
           +
Sbjct: 221 D 221


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 258/603 (42%), Gaps = 67/603 (11%)

Query: 110 FDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV------FDALVRACT------ 157
            DDAL L   L+     + +     LL +    + + A       F+ +VR C+      
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 158 ------------QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK-LY 204
                       ++G  E  +     +   G  +   A N  L  L     +G     L 
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG---IWPNVVCFNMIINEA 261
           + M   G + +  ++ +++  LC E + EEAL L + M         PNVV ++++IN  
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G ++    LF +   M    + P+ VT+  +I+G CK    + AE +   MI  G  
Sbjct: 210 FTEGQVDKPYNLFLE---MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N  TY  LI GY   G  +E +++ +EM  RGL P+   Y S +++L   G    A F 
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              MI K I P   TY IL  G    G + +     + ++E  +  D + +NI  +   K
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  + + M   GL P+++ YG LID  CK G ++ A   +  M      PN+V+
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446

Query: 502 YNSIINGLCKDASLDAAKSL-----------------------------LQASQRIGLL- 531
           +NS++ GLC     + A+ L                             ++  + I L+ 
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506

Query: 532 ------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
                 DA +Y  LI+GY + G+  EA  +F  M ++G++  +V YN L++  C      
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  L + M+  G+ P  VTY T++    +     E  EL+ +M+ SG   D  TYN I+
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIIL 626

Query: 646 SPL 648
           + L
Sbjct: 627 NGL 629



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 238/497 (47%), Gaps = 39/497 (7%)

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
           ++ + + L+ EM+  G   +V T+  VI  LCK    + A  ++ +M+ +G  PN   +N
Sbjct: 214 QVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYN 273

Query: 256 MIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
            +I+    +G  +  +++  +M   S   + P+  T+  ++N  CK GR   A     +M
Sbjct: 274 CLIHGYLSIGKWKEVVQMLEEM---SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM 330

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEE--------------------------------- 342
           I+ GI   V TY  LI GYA  G+  E                                 
Sbjct: 331 IRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMI 390

Query: 343 --ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
             A+ + ++M + GL PN V Y + I  L   G V+ A    + MI++ + P+   ++ L
Sbjct: 391 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 450

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             GLC     ++A +L  ++L++ +  +A  +N LI  LC    +   ++L+  M   G+
Sbjct: 451 VYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGV 510

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            PD  +Y  LI GYC  G  + A +V++ M  +   P  V YN++++G C  + +D A  
Sbjct: 511 RPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYC 570

Query: 521 LLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           L +   R G+    +TYNT+++G F   + +EA  ++  M N G   +   YNI++N LC
Sbjct: 571 LFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLC 630

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K  C  +A ++ + +   G+  + +T+T ++    K    E+ ++L   +  +G+ P+  
Sbjct: 631 KSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVV 690

Query: 640 TYNAIISPLLGEKSAED 656
           TY  +   L+ E S E+
Sbjct: 691 TYRLVAENLIEEGSLEE 707



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 237/486 (48%), Gaps = 4/486 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V Q++   G   + + +N  +   + + +     ++ +EM + G   +  T+  ++ 
Sbjct: 253 AEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLN 312

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LCK  +  EA   +  M++ GI P V  + ++I+     G L    ++   + +M  + 
Sbjct: 313 YLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALS---EMHSFLDLMVENG 369

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P+    N   + + K G ++ A +I   M + G+  NV  Y  LID   + G  ++A 
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
              ++M+  G+ PN VV+NS ++ L      E A  ++ +M+D+ ICP+   ++ L   L
Sbjct: 430 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 489

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C  G V +  +L + +    +  DA+SY  LI+  C +     A+++   M+  GL P  
Sbjct: 490 CNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTE 549

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +TY TL+ GYC    I+ A  ++  M +    P +V YN+I++GL +      AK L   
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               G   D  TYN ++NG   +  + EAF MF  + + G+ +N + + I+I  L K G 
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            + A +L   +  +G++P+ VTY  +     +  S EE   L   M  +G +P++Q  NA
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729

Query: 644 IISPLL 649
           ++  LL
Sbjct: 730 LVRRLL 735



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 226/490 (46%), Gaps = 23/490 (4%)

Query: 121 MSANSVSPLEFLEGLLDSY----EICKATPAVFDALVRACTQIG-----------ATEGA 165
           MSA  + P  +  G L +Y      C+     FD+++R   +             AT+GA
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGA 354

Query: 166 ----YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
               +  +  +   G S   H +N F S   K   I +   ++ +M   G   NV  +  
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I ALCK  ++++A   + +M+  G+ PN+V FN ++   C V   E A +L  +M    
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM---L 471

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              + PN+V  N +I   C +GRV     +   M   G+  +  +Y  LI GY   G ++
Sbjct: 472 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTD 531

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA ++ D MV  GL P  V YN+ +H   +   ++ A  +  +M+ K + P   TY+ + 
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GL +     +A +L+  ++      D Y+YNI++N LCKSN +  A ++  S+  +GL 
Sbjct: 592 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 651

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
            +IIT+  +I    KGG  E A+ ++  +      PN+V Y  +   L ++ SL+   SL
Sbjct: 652 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSL 711

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
             A ++ G   ++   N L+      G I+ A A  S++     +V     ++L++    
Sbjct: 712 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTS 771

Query: 581 FGCYQQAREL 590
                 A+ L
Sbjct: 772 DEYQHHAKSL 781


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 219/462 (47%), Gaps = 52/462 (11%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           +DSY  C         L+ A  ++G  E A +   ++K       +  +N  L  +++  
Sbjct: 125 VDSYCFC--------VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREE 176

Query: 196 EIGRF-WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
                 + +Y EM+ C    N+ TF +++  L K+ +  +A  ++  M   GI PN V +
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            ++I+  CQ G  + A KLF +M   SG+   P+SV HN +++GFCKLGR+  A E+   
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQT-SGN--YPDSVAHNALLDGFCKLGRMVEAFELLRL 293

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
             K G    +R Y++LIDG  R     +A  L   M+K+ + P+ ++Y   I  L   G 
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGK 353

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +E AL +LS M  K I PD + Y+ + K LC  G +++   L  ++ E     DA ++ I
Sbjct: 354 IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK--- 491
           LI  +C++  +  A+++ + +   G  P + T+  LIDG CK G ++ A  +   M+   
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473

Query: 492 ------------------------------------KVEKKPNLVIYNSIINGLCKDASL 515
                                                    P++V YN +ING C+   +
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDI 533

Query: 516 DAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
           D A  LL   Q  GL  D++TYNTLING    G+  EAF +F
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 219/482 (45%), Gaps = 66/482 (13%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKS----GIWPNVVCFNMIINEACQVGDLEFALKLF 274
           F LVI  L ++        LY++ L+     G+  +  CF ++I+   ++G  E A++ F
Sbjct: 95  FGLVIDMLSED----NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESF 150

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY--------AMIKAGIDCNVRT 326
              G M      P+  T+N I+       RV   EE+ +         M+K     N+ T
Sbjct: 151 ---GRMKEFDCRPDVFTYNVIL-------RVMMREEVFFMLAFAVYNEMLKCNCSPNLYT 200

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           +  L+DG  + G + +A ++ D+M  RG+ PN V Y   I  L   G  + A  +  +M 
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                PD   ++ L  G C+ G + +AF+L     ++  V     Y+ LI+ L ++    
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L ++M+ + + PDII Y  LI G  K G IE A+++  +M      P+   YN++I
Sbjct: 321 QAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380

Query: 507 NGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
             LC    L+  +SL L+ S+     DA T+  LI     NG + EA  +F+E+   G +
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS 440

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVM------------------------------- 594
            +   +N LI+ LCK G  ++AR L+  M                               
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILK 500

Query: 595 ----ILH----GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
               + H    G  PD V+Y  L+  F +    +  ++L + + L G+SPD+ TYN +I+
Sbjct: 501 AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560

Query: 647 PL 648
            L
Sbjct: 561 GL 562



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 2/278 (0%)

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
            L ++    +  D + + +L     + G  ++A +   ++ E     D ++YN+++  + 
Sbjct: 114 TLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM 173

Query: 441 KSN-NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           +       A  + + M+     P++ T+G L+DG  K G    A +++++M      PN 
Sbjct: 174 REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSE 558
           V Y  +I+GLC+  S D A+ L    Q  G   D++ +N L++G+   G++ EAF +   
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
               G  +   GY+ LI+ L +   Y QA EL   M+   I PD + YT L+   SK   
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGK 353

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            E+ ++L   M   G+SPD   YNA+I  L G    E+
Sbjct: 354 IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 184/443 (41%), Gaps = 66/443 (14%)

Query: 86  ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
           E + F   L    +++  L   RR+  A  L  N++  N                  K  
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN-----------------IKPD 337

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK--LNEIGRFWKL 203
             ++  L++  ++ G  E A  ++  +  KG S   + +N  +  L    L E GR  +L
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             EM       +  T  ++I ++C+   + EA  ++  + KSG  P+V  FN +I+  C+
Sbjct: 398 --EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455

Query: 264 VGDLEFALKLFRKM---------------GVMSGDSVL---------------------P 287
            G+L+ A  L  KM               G  S D+++                     P
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           + V++N +INGFC+ G ++ A ++   +   G+  +  TY TLI+G  R G  EEA +L 
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
               K     +  VY S + W   +  V  A  +    + K  C D  T + + +   + 
Sbjct: 576 --YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KE 632

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYS---YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           G  ++A +   +++E     D  +   Y I +  LC+S     A  + S +  + ++   
Sbjct: 633 GETERALR---RLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTP 689

Query: 465 ITYGTLIDGYCKGGNIEGAVQVY 487
            +   LI G CK   ++ A++V+
Sbjct: 690 PSCVKLIHGLCKREQLDAAIEVF 712


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 214/415 (51%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N  F H+L + C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NXTFRHTLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  YK
Sbjct: 66  IYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+   KL      M    V P+  T++ +ING CK  ++  A ++   M+  G+  N  
Sbjct: 186 DLDQGFKL---KNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+    +M+ +  +P+ + YN+ I+ L  +GD++ A  +L +M
Sbjct: 243 TFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G +  AF+L   +++E +  D  +Y  LI+ LC+    
Sbjct: 303 RMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRA 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK  +++ A ++ + M++    P +V
Sbjct: 363 TDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVV 417



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 152/289 (52%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  R G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + Q FKL N +    +  D Y+Y++LIN LCK + +  A  L + M+ +GL+P+ +T+ 
Sbjct: 186 DLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A++ Y+ M      P+L+ YN++I GLCK   L  A+ LL   +  
Sbjct: 246 TLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMK 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF +   M    I ++ V Y  LI+ LC+ G    A
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F K    +   +L  +M   G  P
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 152/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  ++ K G+  +V ++ TL++GY R G  ++  +L + M  
Sbjct: 140 NILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  +  A  + ++M+DK + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDS 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A + + Q+L +  + D  +YN LI  LCK  +L  A+ LL  M ++GL PD ITY TLID
Sbjct: 260 AMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A ++ E M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +     +  A  +  EM+  G
Sbjct: 380 DNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 157/292 (53%), Gaps = 1/292 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGD 186

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + + M    + PD +TYS+L  GLC+   + +A  L N++L++ +V +  ++  
Sbjct: 187 LDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTT 246

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK+  + +A +    M+ +  +PD+ITY TLI G CK G+++ A  + + M+   
Sbjct: 247 LIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKG 306

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
            KP+ + Y ++I+G CK+  LD+A  L +   +  + LD + Y  LI+G    G+  +A 
Sbjct: 307 LKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAE 366

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            M  EM +VG+  +   Y ++IN  CK    + A +L+K M   G +P  VT
Sbjct: 367 KMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +  S+   GL P ++++ TL
Sbjct: 118 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ ++ A  L       GL
Sbjct: 178 MNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NGK+  A   + +M +     + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   EL + MV   +  D+  Y A+IS L 
Sbjct: 298 LLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  A D
Sbjct: 358 QEGRATD 364



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G +  A  + + + +  +     S+N L+N   +  +L    +L ++
Sbjct: 137 YFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   +  A  ++  M      PN V + ++I+G CK+  
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 515 LDAA-KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D+A ++  Q   +  L D ITYNTLI G    G + +A  +  EMR  G+  +K+ Y  
Sbjct: 257 VDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G    A EL + M+   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + PDN TY  II+
Sbjct: 377 LKPDNGTYTMIIN 389


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 241/485 (49%), Gaps = 5/485 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G +  + ++   ++   K  + G+ +  Y EM+      +V T++ +I ALCK   +++A
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250

Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVLPNSVTH 292
           + +   M+K+G+ PN   +  I++  C  G  + A+   +K+   GV   D + P+  T+
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGV-EPDGLEPDIATY 309

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
             ++ G+   G +     +   M++ GI  +   Y  LI  YA+ G  +EA+ +  +M +
Sbjct: 310 CTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ 369

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +GL P+ V Y + I  L   G VE A+     MID+ + P +  Y+ L  GLC     ++
Sbjct: 370 QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +L  ++L+  +  +   +N +I+  CK   +  +++L   M+  G+ PDIITY TLID
Sbjct: 430 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 489

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
           GYC  G ++ A+++   M  V  KPN V Y ++ING CK + +  A  L +  +  G+  
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP 549

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           D ITYN ++ G F   + A A  ++  +   G  +    YNI+++ LCK      A  + 
Sbjct: 550 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF 609

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
           + + L  +  +  T+  ++    K     E  +L      +G+ P+  TY  +   ++G+
Sbjct: 610 QNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 669

Query: 652 KSAED 656
              E+
Sbjct: 670 GLLEE 674



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 241/528 (45%), Gaps = 15/528 (2%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           K TP V  +  L+  C +    +  +  +  +  KG  V    +   L  L         
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 201 WKL-YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK---SGIWPNVVCFNM 256
             +  + M     + +V +  +++  LC E + +EAL L + M      G  P+VV +  
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTT 201

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +IN   + GD   A   + +   M    + P+ VT++ II   CK   ++ A E+  +M+
Sbjct: 202 VINGFFKEGDSGKAYSTYHE---MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMV 258

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRL-----CDEMVKRGLMPNNVVYNSTIHWLFA 371
           K G+  N RTY +++ GY   G  +EA+        D +   GL P+   Y + +     
Sbjct: 259 KNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYAT 318

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +G + G   +L  M+   I PDH+ Y+IL     + G V +A  + +++ ++ +  DA +
Sbjct: 319 KGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y  +I  LCKS  +  A      MI  GL P  I Y +LI G C     E A ++   M 
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 438

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIA 550
                 N + +NSII+  CK+  +  ++ L     RIG+  D ITY+TLI+GY + GK+ 
Sbjct: 439 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 498

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EA  + S M +VG+  N V Y  LIN  CK      A  L K M   G+ PD +TY  ++
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
               +        EL+  +  SG   +  TYN I+  L   K  +D +
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 606



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 199/441 (45%), Gaps = 5/441 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A +  L++     GA  G + ++  +   G     + +N  +    K  ++     ++ +
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   +  T+  VI  LCK  ++E+A+  + +M+  G+ P  + +N +I+  C    
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            E A +L  +M       +  N++  N II+  CK GRV  +E++   M++ G+  ++ T
Sbjct: 427 WERAEELILEM---LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 483

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+TLIDGY   G  +EA++L   MV  GL PN V Y + I+       +  AL +  +M 
Sbjct: 484 YSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEME 543

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + PD  TY+I+ +GL +      A +L+ ++ E     +  +YNI+++ LCK+    
Sbjct: 544 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 603

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++  ++ +  L  +  T+  +ID   K G    A  ++         PN   Y  + 
Sbjct: 604 DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMA 663

Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
             +     L+    L  + +  G  +D+   N ++      G+I  A    S +     +
Sbjct: 664 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 723

Query: 566 VNKVGYNILINFLCKFGCYQQ 586
           +     ++ I+ L   G YQ+
Sbjct: 724 LEASTASLFIDLLSG-GKYQE 743


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 212/464 (45%), Gaps = 8/464 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
            +N  +  L +  ++    +    MV  G+  +  TFN +I   C+  +LE A  L+ +M
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKM 190

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
              G   + V +  +I   C+ G ++ AL+LFR+M         P+  TH  ++ G C  
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM-------TQPDMYTHAALVKGLCDA 243

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GR E    +   M + G     R YA L+D + R   +EEA ++ +EM   GLMP  V  
Sbjct: 244 GRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTC 303

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
              ++    EG + GA+ V   M  K   P+ +TY+ + +G C  G V +A  L +Q+ E
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRE 363

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
             +  D  +YN+LI   C   ++ +A +LL  M   GL  D  TY  LID  CK G ++ 
Sbjct: 364 CGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDE 423

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           A  +++ ++    +PN V +N++INGLCK    D A + L+     G   D  TY+  I 
Sbjct: 424 ACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIE 483

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
                    E      EM    +  + V Y I+IN L     Y  A  +   M+  G  P
Sbjct: 484 NLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           D VTYTT V  +      +E   +  +M       D   YN +I
Sbjct: 544 DVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLI 587



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 193/387 (49%), Gaps = 7/387 (1%)

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
           L+LF  M   +  +  P   T+N +I   C+   +  A+     M+++G   +  T+ +L
Sbjct: 113 LRLFAHMYRHAPPA--PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSL 170

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           I GY R    E A  L  +M  RG   + V Y + I      G ++ AL +  +M     
Sbjct: 171 ILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ--- 227

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD +T++ L KGLC  G  ++   +  ++ E        +Y  L++  C+      A++
Sbjct: 228 -PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEK 286

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L+ M   GL+P ++T   +++ YC+ G + GAV+V+E+M+    +PN+  YN+I+ G C
Sbjct: 287 ILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFC 346

Query: 511 KDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
               +  A +LL   +  G+  D +TYN LI G  I+G I  AF +   M   G+A ++ 
Sbjct: 347 NAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQY 406

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            YN+LI+ LCK G   +A  L   +   GI P+ VT+ T++    K    +      ++M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
           + +G +PD  TY+  I  L   K +++
Sbjct: 467 ISAGYAPDTYTYSPFIENLCKTKGSQE 493



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 146/596 (24%), Positives = 254/596 (42%), Gaps = 65/596 (10%)

Query: 122 SANSVSPLEFLEGLLDSYEICKA--------TPAVFD--ALVRACTQIGATEGAYDVIQK 171
           S ++VS    +EG  ++  I +A         P ++   ALV+     G  E    ++QK
Sbjct: 196 SQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQK 255

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +K  G   +  A+   +    +  +     K+  EM   G +  V T  +V+ A C+E +
Sbjct: 256 MKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGR 315

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           +  A+ ++  M   G  PNV  +N I+   C  G +  A+ L  +M       V P+ VT
Sbjct: 316 MSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG---VEPDVVT 372

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I G C  G +  A  +   M   G+  +  TY  LID   + G  +EA  L D + 
Sbjct: 373 YNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            RG+ PN+V +N+ I+ L   G  + A   L +MI     PD +TYS   + LC+    +
Sbjct: 433 YRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQ 492

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +     +++L++ +     +Y I+IN L    N   A ++   M+ +G  PD++TY T +
Sbjct: 493 EGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSV 552

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL---------- 521
             YC  G ++ A  V   MKK     + + YN++I+G       D A ++          
Sbjct: 553 RAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASM 612

Query: 522 -----------------------LQAS---QRIGLLD----------------AITYNTL 539
                                  L+A+   + I L D                A TY ++
Sbjct: 613 PNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSI 672

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           + G+    ++ E  ++ S M+   + +N+  YN L+N  CK   Y  A  L+  MI HG 
Sbjct: 673 LEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGF 732

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           +P+ + Y  L++  +     +   E+         + D   +  II   + +  A+
Sbjct: 733 LPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHAD 788



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 172/401 (42%), Gaps = 27/401 (6%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ L+ A  + G  + A  +   L+ +G   +   +N  ++ L K  +        + M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENM 466

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S GY  +  T++  I  LCK    +E L     ML+  + P+ V + ++IN      + 
Sbjct: 467 ISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNY 526

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +++   G M      P+ VT+   +  +C  GR++ AE +   M K     +   Y
Sbjct: 527 GLATRIW---GQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAY 583

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY------------------NSTIHWL 369
            TLIDG+   G ++ A+ +   M     MPN+  +                   +T  W 
Sbjct: 584 NTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWK 643

Query: 370 FAE-GDVEGALFVLSDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
             E  DV    F L +++ K+  P    TY  + +G      + +   L + + EE++  
Sbjct: 644 TIELADV----FELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPL 699

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +   YN L+N  CK    + A  LL SMI  G +P++I Y  L+ G    G  + A +++
Sbjct: 700 NEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIF 759

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
            + +  E   + +++  II+G  +    D    ++   +++
Sbjct: 760 RSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQM 800



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/335 (20%), Positives = 136/335 (40%), Gaps = 24/335 (7%)

Query: 156 CTQIGATEGAYDVIQKLK--VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
           C   G+ EG + + + L+  VK  +V+   +   ++ L      G   +++ +MVS G  
Sbjct: 486 CKTKGSQEGLFFIDEMLQKDVKPSTVN---YTIVINRLFNERNYGLATRIWGQMVSQGCS 542

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
            +V T+   + A C E +L+EA ++   M K     + + +N +I+    +G  + A+ +
Sbjct: 543 PDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTI 602

Query: 274 FRKMGVMSGDSVLPNSVT--------------HNCIINGFCKLGRVEFAE--EIRYAMIK 317
            + M   +G + +PN  T               +  +        +E A+  E+   M K
Sbjct: 603 LKHM---TGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKK 659

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
             +  + RTY ++++G++     +E   L   M +  L  N  +YN+ ++          
Sbjct: 660 NSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSD 719

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +L  MI     P+   Y  L  GL   G   +A ++      +    D   + ++I+
Sbjct: 720 AWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIID 779

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
              +  +      ++S +      P   TY  L +
Sbjct: 780 GFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTE 814



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/280 (20%), Positives = 109/280 (38%), Gaps = 21/280 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +   VRA    G  + A +V+ ++K     V   A+N  +     + +  R  
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAV 600

Query: 202 KLYKEMVSCGYVENVNTF----------------NLVIYALCKECKLEEALSLYYRMLKS 245
            + K M     + N  TF                 L   ++ K  +L +   L+  M K+
Sbjct: 601 TILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKN 660

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
            +  +   +  I+    +   L+    L   + +M  +++  N   +N ++N FCKL   
Sbjct: 661 SVPSSARTYLSILEGFSEERRLDEVTSL---VSLMKEENLPLNEDIYNALVNCFCKLRMY 717

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +  +MI  G   N+  Y  L+ G    G ++ A  +      +    + +V+   
Sbjct: 718 SDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVI 777

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGL 404
           I     +G  +    ++S M+++  C P   TY++LT+ L
Sbjct: 778 IDGFIRKGHADMCHDMIS-MLEQMKCKPSDETYAMLTEEL 816


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 271/601 (45%), Gaps = 34/601 (5%)

Query: 66  VVSEFRKSP--KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
           VV   R+     LAL F+  +  +N F H+  +   ++  L    + D    L+  +   
Sbjct: 46  VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK-- 103

Query: 124 NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
                   L+G   S ++       F +++    Q+G  E A ++  ++K  G   S+  
Sbjct: 104 --------LQGFHCSEDL-------FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKI 148

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N+ L  L+  N I   + +Y++M   G+  NV T+N+++ ALCK  K++ A  L   M 
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS 208

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G  P+ V +  +I+  C+VG          K G    +   P    +N +ING CK  
Sbjct: 209 NKGCCPDAVSYTTVISSMCEVG--------LVKEGRELAERFEPVVSVYNALINGLCKEH 260

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             + A E+   M++ GI  NV +Y+TLI+     G  E A     +M+KRG  PN    +
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           S +   F  G    AL + + MI    + P+   Y+ L +G C +G + +A  + + + E
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
                +  +Y  LIN   K  +L  A  + + M+  G  P+++ Y  +++  C+    + 
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLI 540
           A  + E M K    P++  +N+ I GLC    LD A+ + +    Q     + +TYN L+
Sbjct: 441 AESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELL 500

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G     +I EA+ +  E+   G+  +   YN L++  C  G    A +L+  M++ G  
Sbjct: 501 DGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS 560

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV---SPDNQTYNAIISPLLGEKSAEDQ 657
           PD +T   ++  + K    E   ++  D+V  G     PD  +Y  +I  L      ED 
Sbjct: 561 PDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619

Query: 658 V 658
           V
Sbjct: 620 V 620



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 207/455 (45%), Gaps = 45/455 (9%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           +  +N  ++ L K ++    ++L +EMV  G   NV +++ +I  LC   ++E A S   
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           +MLK G  PN+   + ++      G    AL L+ +M  + G  + PN V +N ++ GFC
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM--IRGFGLQPNVVAYNTLVQGFC 363

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
             G +  A  +   M + G   N+RTY +LI+G+A+ GS + A+ + ++M+  G  PN V
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           VY + +  L      + A  ++  M  ++  P   T++   KGLC  G +  A K+  Q+
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483

Query: 421 LEEHMV-GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
            ++H    +  +YN L++ L K+N +  A  L   + +RG+     TY TL+ G C  G 
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ---ASQRIGLLDAITY 536
              A+Q+   M    K P+ +  N II   CK    + A  +L      +R    D I+Y
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISY 603

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
             +I G                                   LC+  C +    L++ MI 
Sbjct: 604 TNVIWG-----------------------------------LCRSNCREDGVILLERMIS 628

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
            GI+P   T++ L+  F      ++++  HD   +
Sbjct: 629 AGIVPSIATWSVLINCFIL----DDIVRAHDQFTI 659


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 255/534 (47%), Gaps = 32/534 (5%)

Query: 78  LEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD 137
           + F    G+    +  L S CA+       R    AL L+    SA++VS    + GL +
Sbjct: 88  VRFRPVPGDPLSLNSILLSHCAL-------RSLRPALALLRASESADTVSYNVVISGLTE 140

Query: 138 S-----------YEICK-ATP----AVFDALVRACTQIGATEGAYDVIQKLKVKG---HS 178
                        E+CK   P     V  ALV  C   G  EGA   + ++ V+G   H 
Sbjct: 141 QGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRD-GQVEGAA-ALAEMMVRGREIHR 198

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
           + +  WN  L    K  ++       + M + G   +V  +N ++  LC+  + + A  +
Sbjct: 199 LDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGM 258

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
              M   G+ PNVV +   I E C+   ++ A  L+ +M  M    VLP+ VT + +++G
Sbjct: 259 LETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMG---VLPDVVTLSALVDG 315

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            C+ GR   A  +   M K G   N  TY TLID   +     E+  L  E+V RG++ +
Sbjct: 316 LCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMD 375

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V+Y S + WL  +G ++    +    +  +  P+  TY++L   LCR G V  A ++  
Sbjct: 376 LVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLL 435

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ ++ +  +  +++ +IN L K   L  A   +  M  RG+ P+++TYGT++DG+ K  
Sbjct: 436 EMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQ 495

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYN 537
             E A+ +Y  M     + N  I + ++NGL K+  ++ A++L +   + G LLD + Y 
Sbjct: 496 EQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYT 555

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           TLI+G F  G +  AF +  E+    ++ + V YN+ +N LC  G  ++A  ++
Sbjct: 556 TLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 229/474 (48%), Gaps = 7/474 (1%)

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWK-LYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
            S    ++N  +S L +    G     L  EM   G   +  T N  + ALC++ ++E A
Sbjct: 124 ESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGA 183

Query: 236 LSLYYRMLKSGIWP--NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            +L   M++       +VV +N +++  C+ GD+E AL   ++M       V  + V +N
Sbjct: 184 AALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRT---QGVGVDVVGYN 240

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            ++ G C+ G  + A  +   M   G++ NV TY T I    R  + ++A  L +EMV+ 
Sbjct: 241 TLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRM 300

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G++P+ V  ++ +  L   G    A  +  +M      P+H TY  L   L +     ++
Sbjct: 301 GVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSES 360

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L  +V+   +V D   Y  L+++L K   +   K +    +     P+ +TY  LID 
Sbjct: 361 HGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDA 420

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LD 532
            C+ GN++GA Q+   M+     PN+V ++SIINGL K   L  A   ++  +  G+  +
Sbjct: 421 LCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPN 480

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +TY T+++G+F   +   A  ++ EM   G+ VNK   ++L+N L K G  ++A  L +
Sbjct: 481 VVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFR 540

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            M   G++ D+V YTTL+    K  +     ++  ++    +SPD   YN  ++
Sbjct: 541 DMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVN 594



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 6/296 (2%)

Query: 358 NNVVYNSTIHWLFAEGDVEG-ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           + V YN  I  L  +G   G A  +L++M  + +  D  T +     LCR+G V+ A  L
Sbjct: 127 DTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAAL 186

Query: 417 HNQVL---EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
              ++   E H + D   +N L++  CKS ++ AA      M  +G+  D++ Y TL+ G
Sbjct: 187 AEMMVRGREIHRL-DVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAG 245

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
            C+ G  + A  + E MK    +PN+V Y + I   C+  ++D A SL +   R+G+L D
Sbjct: 246 LCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPD 305

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            +T + L++G    G+ +EA+A+F EM  +G A N V Y  LI+ L K     ++  L+ 
Sbjct: 306 VVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLG 365

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            ++  G++ D V YT+L+    K    +EV ++    +    +P+  TY  +I  L
Sbjct: 366 EVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDAL 421



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 8/226 (3%)

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG-AVQ 485
           GD  S N ++   C   +L  A  LL +        D ++Y  +I G  + G   G A  
Sbjct: 95  GDPLSLNSILLSHCALRSLRPALALLRA----SESADTVSYNVVISGLTEQGRHGGLAPA 150

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR---IGLLDAITYNTLING 542
           +   M K     + V  N+ +  LC+D  ++ A +L +   R   I  LD + +N L++G
Sbjct: 151 LLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDG 210

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
           Y  +G +  A      MR  G+ V+ VGYN L+  LC+ G    AR +++ M   G+ P+
Sbjct: 211 YCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPN 270

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            VTYTT +    +  + ++   L+++MV  GV PD  T +A++  L
Sbjct: 271 VVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGL 316


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 217/414 (52%), Gaps = 4/414 (0%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDALVR 154
           S C ++H L   +   +A  L+  ++S     S       ++++    ++   VF  L+ 
Sbjct: 2   SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           A  + G    A +  +  +     V        L HL+KL      W  Y+E++ CGY  
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++GDL+     F
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG---F 178

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ TLIDG+
Sbjct: 179 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 238

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M  K + PD 
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDK 298

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ LC+      A+++L  
Sbjct: 299 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 358

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 359 MLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 161/300 (53%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQ 526
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+ + S 
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 291

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           +    D ITY TLI+G    G +  AF     M    I +++V Y  LI+ LC+ G    
Sbjct: 292 KELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVD 351

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 352 AEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 411



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 127 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 186

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 187 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M ++ L PD ITY TLID
Sbjct: 247 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLID 306

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 307 GCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKP 366

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D+ TY  +IN +   G + +   +  EM+  G   + V YN+L+N
Sbjct: 367 DSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 411



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 105 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 164

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 165 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 224

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 225 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 284

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M +  + PD +TYTTL+    K    +   E    M+   +  D   Y A+IS L 
Sbjct: 285 LIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLC 344

Query: 650 GEKSAED 656
            E  + D
Sbjct: 345 QEGRSVD 351



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 54/273 (19%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLI 471
           +SY  +I++LC    L+ AK L+  ++ R                      D+  +  LI
Sbjct: 1   HSYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLI 60

Query: 472 DGYCKGGNIEGAVQVY-------------------ENMKKVE----------------KK 496
             Y + G +  A++ Y                   E++ K++                  
Sbjct: 61  TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
            +L  +N +++  CKD  +  A+S+  A  + GL  + ++YNTL+NGY   G + E F +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            S M   G+  +   Y++LIN LCK      A EL   M++ G++P+ VT+TTL+    K
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           N   +  +E++  M+   +SPD  TYN +I  L
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 255/540 (47%), Gaps = 25/540 (4%)

Query: 133 EGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            GL+++   E C      ++ L+    + G       ++ +++ KG   ++  +   +  
Sbjct: 101 RGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHW 160

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +  ++ +   L  EM + G   NV  +N VI ALCK     +A  +  +M+KS   P+
Sbjct: 161 LGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPD 220

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV FN +I   C+ GD+  ALKL R+  +  G  + PN +++  +I+GFC  G    A +
Sbjct: 221 VVTFNTMIAGFCREGDVREALKLLRE-AIRRG--LEPNQLSYTPLIHGFCVRGEAMVASD 277

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M+  G   ++ T   LI G    G   +AL + ++M +R +MP+  +YN  I  L 
Sbjct: 278 LLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLC 337

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            +  +  A  +L +M+++ + PD F Y+ L  G  R+  +  A K+  + +EE    D  
Sbjct: 338 KKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDIV 396

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           +YN++I   CK   +  A   +SSM   G IPD  TY TL+DGY K G+I  ++++  +M
Sbjct: 397 AYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDM 456

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
            K   KPN+  Y S+I G C      +A+ L    Q  GL  + + Y  LI   F   K+
Sbjct: 457 MKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKV 516

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFL--CKFGCY-------QQARE------LMKVM 594
            +A A F  M       N    + L+N L  C+ G         +QA E      + + +
Sbjct: 517 IQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGL 576

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           I  G+ P    Y  ++    ++    + ++L D M   G  PD  T+   +S L G  SA
Sbjct: 577 ISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITF---LSLLYGFSSA 633



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 204/452 (45%), Gaps = 5/452 (1%)

Query: 199 RFWKLYKEM-VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
           R   LY EM V  G  ++ +T  +++  LC E ++EE   L       G  P  V +N++
Sbjct: 64  RARGLYGEMLVREGGADDYSTC-VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C+ GD+   L L   +G M    ++P  VT+  II+   + G +   E +   M  
Sbjct: 123 IDGYCRRGDIGRGLLL---LGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRA 179

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G+  NV+ Y T+I+   +  S+ +A  + ++MVK    P+ V +N+ I     EGDV  
Sbjct: 180 RGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVRE 239

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL +L + I + + P+  +Y+ L  G C  G    A  L  +++      D  +   LI+
Sbjct: 240 ALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIH 299

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            L  S  +  A  +   M  R ++PD   Y  LI G CK   +  A  + E M + + +P
Sbjct: 300 GLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQP 359

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           +  IY ++I+G  +   L  A+ + +  +     D + YN +I GY   G + EA    S
Sbjct: 360 DKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMS 419

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            MR  G   ++  Y  L++   K G    +  L+  M+     P+  TY +L+  +    
Sbjct: 420 SMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIG 479

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
                 +L   M   G+ P+   Y  +I  L 
Sbjct: 480 DTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLF 511



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 160/384 (41%), Gaps = 59/384 (15%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           TP +    VR    +     A D++ ++  +GH+  +      +  LV   ++     + 
Sbjct: 260 TPLIHGFCVRGEAMV-----ASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVR 314

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           ++M     + + N +N++I  LCK+  L  A +L   ML+  + P+   +  +I+   + 
Sbjct: 315 EKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRS 374

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             L  A K+F  M     +   P+ V +N +I G+CK G ++ A     +M KAG   + 
Sbjct: 375 DKLSDARKIFEFME----EKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDE 430

Query: 325 RTYATLIDGYARGGSSEEALRL-CDEMVKR------------------------------ 353
            TY TL+DGYA+ G    +LRL CD M +R                              
Sbjct: 431 FTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAK 490

Query: 354 ----GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL--CRN 407
               GL PN V Y   I  LF +  V  A      M+  H  P+  T   L  GL  CR+
Sbjct: 491 MQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRH 550

Query: 408 GCVKQAFKLHNQVLEEHMVGDAY-------------SYNILINYLCKSNNLAAAKQLLSS 454
           G V        Q  E+  + D +             +YN +I  LC+ N L  A  L   
Sbjct: 551 GMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDK 610

Query: 455 MIVRGLIPDIITYGTLIDGYCKGG 478
           M  +G +PD IT+ +L+ G+   G
Sbjct: 611 MSNKGCLPDPITFLSLLYGFSSAG 634



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 1/306 (0%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           E A  L  EM+ R    ++      +  L  EG VE    ++     +   P    Y++L
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G CR G + +   L  ++  + ++    +Y  +I++L +  +L   + LL  M  RGL
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P++  Y T+I+  CK  +   A  +   M K    P++V +N++I G C++  +  A  
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 521 LLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
           LL+ + R GL  + ++Y  LI+G+ + G+   A  +  EM   G   + +    LI+ L 
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G    A  + + M    ++PD   Y  L++   K         L ++M+   V PD  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 640 TYNAII 645
            Y  +I
Sbjct: 363 IYTTLI 368



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 47/295 (15%)

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           E A  +  +M+ +    D ++  ++ +GLC  G V++   L      E  V  A  YN+L
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  C+  ++     LL  M  +G+IP ++TYG +I    + G++     +   M+    
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
            PN+ IYN++IN LCK  S   A  +L Q  +     D +T+NT+I G+           
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGF----------- 231

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
                                   C+ G  ++A +L++  I  G+ P+ ++YT L+  F 
Sbjct: 232 ------------------------CREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFC 267

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL-----------LGEKSAEDQV 658
                    +L  +M+  G +PD  T  A+I  L           + EK AE QV
Sbjct: 268 VRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQV 322



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/249 (19%), Positives = 101/249 (40%), Gaps = 20/249 (8%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           KA P +  ++ +++   + G  + A   +  ++  G       +   +    K  +I   
Sbjct: 390 KACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISAS 449

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +L  +M+      N+ T+  +I   C       A  L+ +M   G++PNVV + ++I  
Sbjct: 450 LRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGS 509

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF--CKLGRVEFAE--------- 309
             +   +  A   F  M +   +   PN  T + ++NG   C+ G V             
Sbjct: 510 LFKKDKVIQAAAYFEHMLL---NHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEK 566

Query: 310 ----EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
               ++   +I  G+D  +  Y  +I    R     +A+ L D+M  +G +P+ + + S 
Sbjct: 567 SALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSL 626

Query: 366 IHWLFAEGD 374
           ++   + G+
Sbjct: 627 LYGFSSAGE 635


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 258/533 (48%), Gaps = 38/533 (7%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           ATP +   LVRA       E  +++I    ++   +S  +  + +S   K N I + +  
Sbjct: 41  ATPTMACILVRAKMH-EEIEELHNLILSSSIQKTKLS--SLLSVVSIFAKSNHIDKAFPQ 97

Query: 204 YKEMVSCGYVEN---VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + + V   + EN   +  +N+++ +  +E ++E    LY  M+  GI P    FN++I  
Sbjct: 98  F-QFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRA 156

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C    ++ A +LF +M         PN  T   ++ G+CK G  +   E+  +M   G+
Sbjct: 157 LCDSSCVDAARELFDEM---PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGV 213

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N   Y T++  + R G ++++ +L ++M + GL+P+ V +NS I  L  EG V  A  
Sbjct: 214 LPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273

Query: 381 VLSDM-IDKHIC---PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
           + SDM +D+++    P+  TY+++ KG C+ G ++ A  L   + E   +    SYNI +
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWL 333

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             L +      A+ +L  MI +G+ P I +Y  L+DG CK G +  A  +   MK+    
Sbjct: 334 QGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVS 393

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAM 555
           P+ V Y  +++G C    +DAAKSLLQ   R   L +A T N L++  +  G+I+EA  +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEEL 453

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG----------------- 598
             +M   G  ++ V  NI+++ LC  G   +A E++K M +HG                 
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513

Query: 599 ------IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                  +PD +TY+TL+    K     E   L  +M+   + PD+  YN  I
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 262/602 (43%), Gaps = 68/602 (11%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ--KLKVKGH 177
           L+ A     +E L  L+ S  I K   +   ++V    +    + A+   Q  + +   +
Sbjct: 49  LVRAKMHEEIEELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPEN 108

Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
              I+ +N  L   ++   +     LYK+MV CG      TFNL+I ALC    ++ A  
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
           L+  M + G  PN   F +++   C+ G  +  L+L   M       VLPN V +N I++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFG---VLPNKVVYNTIVS 225

Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM- 356
            FC+ GR + +E++   M + G+  ++ T+ + I    + G   +A R+  +M     + 
Sbjct: 226 SFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285

Query: 357 ---PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
              PN++ YN  +      G +E A  +   + +        +Y+I  +GL R+G   +A
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEA 345

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             +  Q++++ +    YSYNIL++ LCK   L+ AK ++  M   G+ PD +TYG L+ G
Sbjct: 346 ETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHG 405

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPN----------------------------------- 498
           YC  G ++ A  + + M +    PN                                   
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLD 465

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQA-------------SQRIGLLDA-----------I 534
            V  N I++GLC    LD A  +++              +  IGL+D            I
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TY+TL+NG    G+ AEA  +F+EM    +  + + YNI I+  CK G    A  ++K M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDM 585

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
              G      TY +L+          E+  L D+M   G+SP+  TYN  I  L      
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKV 645

Query: 655 ED 656
           ED
Sbjct: 646 ED 647



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 250/552 (45%), Gaps = 68/552 (12%)

Query: 129 LEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +EF+  L     +C  +P    F+ L+RA       + A ++  ++  KG   +   +  
Sbjct: 128 VEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGI 187

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K     +  +L   M S G + N   +N ++ + C+E + +++  L  +M + G
Sbjct: 188 LVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEG 247

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL----PNSVTHNCIINGFCKL 302
           + P++V FN  I+  C+ G +  A ++F  M +   D  L    PNS+T+N ++ GFCK+
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMEL---DEYLGLPRPNSITYNLMLKGFCKV 304

Query: 303 GRVE-----------------------------------FAEEIRYAMIKAGIDCNVRTY 327
           G +E                                    AE +   MI  GI  ++ +Y
Sbjct: 305 GLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSY 364

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+DG  + G   +A  +   M + G+ P+ V Y   +H   + G V+ A  +L +M+ 
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
            +  P+ +T +IL   L   G + +A +L  ++ E+    D  + NI+++ LC S  L  
Sbjct: 425 NNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484

Query: 448 AKQLLSSMIVRG-----------------------LIPDIITYGTLIDGYCKGGNIEGAV 484
           A +++  M V G                        +PD+ITY TL++G CK G    A 
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGY 543
            ++  M   + +P+ + YN  I+  CK   + +A  +L+  ++ G   ++ TYN+LI G 
Sbjct: 545 TLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
            I  +I E   +  EMR  GI+ N   YN  I +LC+ G  + A  L+  M+   I P+ 
Sbjct: 605 GIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNV 664

Query: 604 VTYTTLVTRFSK 615
            ++  L+  F K
Sbjct: 665 FSFKYLIGAFCK 676



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/561 (22%), Positives = 243/561 (43%), Gaps = 76/561 (13%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EICKATPAVFDALVRACT 157
            +V  +V +     AL   G ++ A+ +    F +  LD Y  + +     ++ +++   
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRI----FSDMELDEYLGLPRPNSITYNLMLKGFC 302

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           ++G  E A  + + ++     VS+ ++N +L  LV+  +      + K+M+  G   ++ 
Sbjct: 303 KVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIY 362

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           ++N+++  LCK   L +A ++   M ++G+ P+ V +  +++  C VG ++ A  L ++M
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422

Query: 278 GVMSGDSVLPN-----------------------------------SVTHNCIINGFCKL 302
                ++ LPN                                   +VT N I++G C  
Sbjct: 423 ---MRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479

Query: 303 GRVEFAEEIRYAMIKAGI---------------------DC--NVRTYATLIDGYARGGS 339
           G ++ A EI   M   G                      +C  ++ TY+TL++G  + G 
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA  L  EM+   L P+++ YN  IH    +G +  A  VL DM  K       TY+ 
Sbjct: 540 FAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599

Query: 400 LTKGLCRNGCVKQAFKLH---NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           L  GL   G   Q F++H   +++ E+ +  +  +YN  I YLC+   +  A  LL  M+
Sbjct: 600 LILGL---GIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMM 656

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV-EKKPNLVIYNSIINGLCKDASL 515
            + + P++ ++  LI  +CK  + + A +V+E    +  +K  L  Y+ + N L     L
Sbjct: 657 QKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQL 714

Query: 516 DAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
             A  LL+A    G  L    Y  L+       ++  A  +  +M + G   +      +
Sbjct: 715 LKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPV 774

Query: 575 INFLCKFGCYQQARELMKVMI 595
           I+ L K G  ++A    + M+
Sbjct: 775 IDGLGKMGNKKEANNFAEKMM 795



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 8/248 (3%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A+N F+ H  K  +I   +++ K+M   G  +++ T+N +I  L  + ++ E   L   M
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            + GI PN+  +N  I   C+ G +E A  L  +M      ++ PN  +   +I  FCK+
Sbjct: 621 REKGISPNICTYNTAIQYLCEGGKVEDATNLLDEM---MQKNIAPNVFSFKYLIGAFCKV 677

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRT--YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
              + A+E+    +     C  +   Y+ + +     G   +A  L + ++ RG      
Sbjct: 678 PDFDMAQEVFETAVSI---CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +Y   +  L  + ++E A  +L  MIDK    D      +  GL + G  K+A     ++
Sbjct: 735 LYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKM 794

Query: 421 LEEHMVGD 428
           +E   VG+
Sbjct: 795 MEMASVGE 802


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 285/588 (48%), Gaps = 60/588 (10%)

Query: 108 RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYD 167
            R D  L ++G L+  N + P +F      SY           +L+    + G  + A+ 
Sbjct: 28  HRPDLGLAIVGRLLK-NGLGPDDF------SY-----------SLIYGFVKDGEVDKAHC 69

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           +  ++  +G    I   N+ +  L K+ E+ +   + ++MV  G   ++ T++L+I  LC
Sbjct: 70  LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 129

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           K   +++A  +  +M+++G  PN + +N +I+     G    ++++F++M   S   V+P
Sbjct: 130 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM---SSCGVIP 186

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT------------------ 329
                N  I+   K GR   A+ I  +M+  G   ++ +Y+T                  
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 246

Query: 330 -------------------LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
                              LI+ YAR G  ++A+ + ++M  +G++P+ V + + I  L 
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G ++ AL   + M+D  + P    Y  L +G C +G + +A +L ++++ + +     
Sbjct: 307 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 366

Query: 431 SY-NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            Y + +IN LCK   +A  K ++  M+  G  P+++T+ +L++GYC  GN+E A  + + 
Sbjct: 367 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 426

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M  +  +PN  IY ++++G CK+  +D A ++ +     G+   ++ Y+ +++G F   +
Sbjct: 427 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 486

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
              A  MF EM   G  V+   Y +++  LC+  C  +A  L++ +    +  D +T+  
Sbjct: 487 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 546

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +++   K    +E  EL D +   G+ P+ QTY+ +I+ L+ E+S E+
Sbjct: 547 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 594



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 220/474 (46%), Gaps = 43/474 (9%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
            ++T+N++I    +  + +  L++  R+LK+G+ P+   +++I     + G+++ A  LF
Sbjct: 13  TIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG-FVKDGEVDKAHCLF 71

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M       VLP  +  N II   CK+  ++ AE I   M+ +GI  ++ TY+ +IDG 
Sbjct: 72  LEM---MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGL 128

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH-------W------------------- 368
            +  + ++A R+ ++MV+ G  PN++ YNS IH       W                   
Sbjct: 129 CKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTV 188

Query: 369 ---------LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG--LCRNGCVKQAFKLH 417
                    LF  G    A  +   M+ K   PD  +YS +  G     + C+     + 
Sbjct: 189 DNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 248

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
           N +L + +  + + +NILIN   +   +  A  +   M  +G+IPD +T+ T+I   C+ 
Sbjct: 249 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 308

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAIT 535
           G ++ A+  + +M  +   P+  +Y  +I G C    L  AK L+    ++ I       
Sbjct: 309 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 368

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           ++++IN     G++AE   +   M   G   N V +N L+   C  G  ++A  L+  M 
Sbjct: 369 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 428

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             GI P+   Y TLV  + KN   ++ + +  DM+  GV P +  Y+ I+  L 
Sbjct: 429 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 482



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 191/411 (46%), Gaps = 5/411 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF+ L+ A  + G  + A  + + ++ KG       +   +S L ++  +      +  M
Sbjct: 262 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 321

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP-NVVCFNMIINEACQVGD 266
           V  G   +   +  +I   C   +L +A  L   M+   I P  V  F+ IIN  C+ G 
Sbjct: 322 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 381

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +    K    M V +G    PN VT N ++ G+C +G +E A  +  AM   GI+ N   
Sbjct: 382 VAEG-KDIMDMMVQTGQR--PNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 438

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TL+DGY + G  ++AL +  +M+ +G+ P +V+Y+  +H LF       A  +  +MI
Sbjct: 439 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 498

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +        TY ++  GLCRN C  +A  L  ++   ++  D  ++NI+I+ + K     
Sbjct: 499 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 558

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            AK+L  ++   GL+P+I TY  +I    K  + E A  ++ +++K     +  + N I+
Sbjct: 559 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
             L   A +  A + L       L L+A T + L + +   GK  E   + 
Sbjct: 619 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 192/398 (48%), Gaps = 40/398 (10%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P   T+N +I+ + ++ R +    I   ++K G+  +  +Y +LI G+ + G  ++A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDKAHCL 70

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             EM+++G++P  ++ NS I  L    +++ A  ++  M+D  I PD FTYS++  GLC+
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNIL------------------------------- 435
           +  + +A ++  Q++E     ++ +YN L                               
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 436 ----INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN--IEGAVQVYEN 489
               I+ L K      AK +  SM+++G  PDII+Y T++ GY    +  +     ++  
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
           M      PN  ++N +IN   +   +D A  + +  Q  G++ D +T+ T+I+     G+
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY-T 607
           + +A   F+ M ++G+  ++  Y  LI   C  G   +A+EL+  M+   I P  V Y +
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +++    K     E  ++ D MV +G  P+  T+N+++
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLM 408



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 37/261 (14%)

Query: 423 EHMVGDAYSYNILIN----------------------------------YLCKSNNLAAA 448
            H     ++YNILI+                                     K   +  A
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 67

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L   M+ +G++P I+   ++I   CK   ++ A  + + M      P+L  Y+ II+G
Sbjct: 68  HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LCK  ++D A+ +L+     G   ++ITYN+LI+GY I+G   E+  +F +M + G+   
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP--EEVIEL 625
               N  I+ L K G   +A+ +   M+L G  PD ++Y+T++  ++        +V  +
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247

Query: 626 HDDMVLSGVSPDNQTYNAIIS 646
            + M+  G++P+   +N +I+
Sbjct: 248 FNLMLTKGIAPNKHVFNILIN 268



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 34/265 (12%)

Query: 91  SHSLESSCAIVHLLVNWR----RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP 146
           S  +E +C I   LV+      R DDAL +  +++                 ++  K T 
Sbjct: 429 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDML-----------------HKGVKPTS 471

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            ++  ++    Q   T  A  +  ++   G +VSIH +   L  L + N       L ++
Sbjct: 472 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 531

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           + +     ++ TFN+VI A+ K  + +EA  L+  +   G+ PN+  ++M+I    +   
Sbjct: 532 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 591

Query: 267 LEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI--KAGID 321
            E A  LF    K G  S DS L N +           L + E A+   Y  I  +  + 
Sbjct: 592 YEEADNLFISVEKSGHAS-DSRLLNHIVRML-------LNKAEVAKASNYLSIIGENNLT 643

Query: 322 CNVRTYATLIDGYARGGSSEEALRL 346
               T + L   ++R G   E ++L
Sbjct: 644 LEASTISLLASLFSREGKYREHIKL 668



 Score = 40.4 bits (93), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 1/121 (0%)

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN LI+ Y    +     A+   +   G+  +   Y+++  F+ K G   +A  L   M
Sbjct: 16  TYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFV-KDGEVDKAHCLFLEM 74

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +  G++P  +   +++    K    ++   +   MV SG++PD  TY+ II  L   K+ 
Sbjct: 75  MEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAM 134

Query: 655 E 655
           +
Sbjct: 135 D 135


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 279/587 (47%), Gaps = 57/587 (9%)

Query: 108 RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYD 167
           +R D+AL ++ + MS     P  F                 ++ ++++      ++ A D
Sbjct: 214 KRTDEALSMLLHRMSELGCVPDAF----------------SYNTVIKSLCGGSRSQEALD 257

Query: 168 VIQKL-KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
           ++ ++ K  G S  + ++   +  L    EI +   L+ EMV  G V NV T+N +++AL
Sbjct: 258 MLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHAL 317

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           CK   +++A  +  +M  + I P+ V +  +I+    +G  + A K+F++M   + + ++
Sbjct: 318 CKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM---TREGLI 374

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+ VT N +++  CK  R + A EI +++   G   ++ +Y+ L+ GYA  G   +   L
Sbjct: 375 PDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNL 434

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M   G++ ++  +N  I+     G ++ AL + ++M  + + P+  TY+ +   LCR
Sbjct: 435 FHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCR 494

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI-PDII 465
            G +  A +  +Q++   +  +   Y+ LI   C   +L  AK+L+S M+ +G+  P+I 
Sbjct: 495 MGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNIT 554

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            + ++I   C  G +  A  V+  +  +  +P++  +NS+I+G C    +D A  +L A 
Sbjct: 555 FFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAM 614

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G   D +TY+TLINGYF +G+I +   +F EM    +    V Y+++++ L + G  
Sbjct: 615 VSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRT 674

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI--------------------- 623
             A+++   MI  G      TYT ++    +N   +E I                     
Sbjct: 675 SAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTM 734

Query: 624 -----------ELHD---DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
                      E HD    +  SG+ P+  TY  +I  LL E S E+
Sbjct: 735 IHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEE 781



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 230/461 (49%), Gaps = 8/461 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEA 261
           L   M   G V +  ++N VI +LC   + +EAL +  RM K  G  P+VV + M+I+  
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL 282

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G++  A  LF +M V  G  V+PN VT+N I++  CK   ++ AE +   M    I 
Sbjct: 283 FMEGEISKACNLFNEM-VQKG--VVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQ 339

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  TY  +I GY+  G  +EA ++  EM + GL+P+ V +NS +  L      + A  +
Sbjct: 340 PDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEI 399

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              +  K   PD  +YSIL  G    G       L + + +  +V D++ +NILIN   K
Sbjct: 400 FHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAK 459

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A  + + M  +G+ P+++TY T+I   C+ G +  A++    M  +  KPN V+
Sbjct: 460 RGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVV 519

Query: 502 YNSIINGLCKDASLDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
           Y+S+I G C    L  AK L+     Q I   +   ++++I+     G++  A  +F+ +
Sbjct: 520 YHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLV 579

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
            ++G   +   +N LI+  C  G   +A  ++  M+  G  PD VTY+TL+  + K+   
Sbjct: 580 IHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRI 639

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
           ++ + L  +M+   V P   TY+ ++  L   G  SA  ++
Sbjct: 640 DDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKM 680



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 231/521 (44%), Gaps = 57/521 (10%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           +IVH L   R  D A L++  +   NS+ P E                  + A++   + 
Sbjct: 312 SIVHALCKARAMDKAELVLRQMFD-NSIQPDE----------------VTYTAMIHGYSC 354

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +G  + A  + +++  +G    I  +N+ +  L K        +++  + + G+  ++ +
Sbjct: 355 LGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIIS 414

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++++++    E +  +  +L++ M  +GI  +  CFN++IN   + G ++ AL +F +M 
Sbjct: 415 YSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEM- 473

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
              G  V PN VT+  +I   C++GR+  A E    MI  G+  N   Y +LI G+   G
Sbjct: 474 --RGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHG 531

Query: 339 SSEEALRLCDEMVKRGL-MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
              +A  L  EM+ +G+  PN   ++S IH L  EG V  A  V + +I     PD FT+
Sbjct: 532 DLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTF 591

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN-----------------YLC 440
           + L  G C  G + +AF + + ++      D  +Y+ LIN                  LC
Sbjct: 592 NSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLC 651

Query: 441 K------------------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           K                  +   +AAK++   MI  G    I TY  ++ G C+    + 
Sbjct: 652 KRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDE 711

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLIN 541
           A+ ++  +  +  K  + I N++I+ L K    + A  L  +    GL+ +A TY  +I 
Sbjct: 712 AITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMII 771

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G + EA  MFS M   G A +    N +I  L + G
Sbjct: 772 NLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKG 812



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 201/405 (49%), Gaps = 5/405 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ L+ A  + G  + A  +  +++ +G S ++  +   ++ L ++  +    +   +M+
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDL 267
           S G   N   ++ +I   C    L +A  L   M+  GI  PN+  F+ II+  C  G +
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F  + +  GD   P+  T N +I+G+C +G+++ A  +  AM+ AG + +V TY
Sbjct: 570 MNAQDVF-NLVIHIGDR--PDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTY 626

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +TLI+GY + G  ++ L L  EM+ + + P  V Y+  +  LF  G    A  +  +MI+
Sbjct: 627 STLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                   TY+I+ +GLCRN C  +A  L +++   ++  +    N +I+ L K      
Sbjct: 687 SGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREE 746

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L +S+   GL+P+  TYG +I    K G++E A  ++ +M+K    P+  + N II 
Sbjct: 747 AHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIR 806

Query: 508 GLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
            L +   +  A   + +    I  L+A T + LI+ +   G+  E
Sbjct: 807 MLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYRE 851



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 38/364 (10%)

Query: 320 IDCNVRTYATLID----------GYA------RGG-------------------SSEEAL 344
           +   V TY  L+D          G A      R G                    ++EAL
Sbjct: 161 VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEAL 220

Query: 345 R-LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTK 402
             L   M + G +P+   YN+ I  L      + AL +L  M     C PD  +Y+++  
Sbjct: 221 SMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIH 280

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GL   G + +A  L N+++++ +V +  +YN +++ LCK+  +  A+ +L  M    + P
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSL 521
           D +TY  +I GY   G  + A ++++ M +    P++V +NS+++ LCK   S +AA+  
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
              + +    D I+Y+ L++GY   G+  +   +F  M + GI  +   +NILIN   K 
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKR 460

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +A  +   M   G+ P+ VTY T++    +     + +E    M+  G+ P+   Y
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVY 520

Query: 642 NAII 645
           +++I
Sbjct: 521 HSLI 524



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 150/322 (46%), Gaps = 28/322 (8%)

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
           S+E+A  L DE++++         ++ +H       + G L  L+   D   C D    +
Sbjct: 98  STEDAHHLFDELLRQ---------DTPVHGR----ALNGFLAALARARDSVACSDAPALA 144

Query: 399 I-LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + L   +CR     +   L             ++Y IL++  C++          + ++ 
Sbjct: 145 VALFNRICREEAGPRVVPL-----------TVHTYGILMDCCCRARRPDLGPAFFARLLR 193

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQ-VYENMKKVEKKPNLVIYNSIINGLCKDA-SL 515
            GL  D I   T +   C     + A+  +   M ++   P+   YN++I  LC  + S 
Sbjct: 194 AGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQ 253

Query: 516 DAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           +A   LL+ ++  G   D ++Y  +I+G F+ G+I++A  +F+EM   G+  N V YN +
Sbjct: 254 EALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSI 313

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           ++ LCK     +A  +++ M  + I PD VTYT ++  +S     +E  ++  +M   G+
Sbjct: 314 VHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGL 373

Query: 635 SPDNQTYNAIISPLLGEKSAED 656
            PD  T+N+++  L   K +++
Sbjct: 374 IPDIVTFNSLMDSLCKHKRSKE 395



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 121/269 (44%), Gaps = 3/269 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F++L+     +G  + A+ V+  +   G    +  ++  ++   K   I     L++EM
Sbjct: 590 TFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREM 649

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +         T++LV+  L +  +   A  +++ M++SG   ++  + +I+   C+    
Sbjct: 650 LCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCT 709

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ LF K+G M+    +      N +I+   K+ R E A ++  ++  +G+  N  TY
Sbjct: 710 DEAITLFHKLGAMNLKFEI---AILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTY 766

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I    + GS EEA  +   M K G  P++ + N  I  L  +G++  A + +S +  
Sbjct: 767 GVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDG 826

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKL 416
             I  +  T S+L       G  ++  K 
Sbjct: 827 TIISLEASTTSLLISLFASKGRYREQIKF 855



 Score = 46.2 bits (108), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 91/238 (38%), Gaps = 20/238 (8%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R DD L+L   ++    V P      L            V D L RA    G T  A  +
Sbjct: 638 RIDDGLILFREML-CKRVKPTTVTYSL------------VLDGLFRA----GRTSAAKKM 680

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
             ++   G ++SI  +   L  L + N       L+ ++ +      +   N +I+AL K
Sbjct: 681 FHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYK 740

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             + EEA  L+  +  SG+ PN   + ++I    + G +E A  +F     M      P+
Sbjct: 741 VKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSS---MEKTGCAPS 797

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           S   N II    + G +  A      +    I     T + LI  +A  G   E ++ 
Sbjct: 798 SRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKF 855


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 221/432 (51%), Gaps = 8/432 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V ++N +I  L KE  +++A   Y+ ML   + P+ V +N II    +   ++ A+++ 
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
             M       V+PN  T+N I++G+C  G+ E A  I   M   GI+ +V TY +L+D  
Sbjct: 70  TVM-------VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYL 122

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G   EA ++ D MVKRGL P+   Y + +H   ++G +     +L+ M+   +  DH
Sbjct: 123 CKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDH 182

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
             ++IL     +   V +   + +++ ++ +  +A +Y  +I+ LCK   L  A      
Sbjct: 183 HVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQ 242

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           MI +GL P+++ Y +LI   C     E A ++   +      PN+V +N+I++ LCK+  
Sbjct: 243 MIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGR 302

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +  +K L      IG+  D ITY+TLI+GY + GK+  A  + + M +VG+  + V Y+ 
Sbjct: 303 VIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LIN  CK    + A  L K M  +G+ PD +TY  ++    +        EL+  +  SG
Sbjct: 363 LINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422

Query: 634 VSPDNQTYNAII 645
              +  TYN I+
Sbjct: 423 TQLELSTYNIIL 434



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 229/437 (52%), Gaps = 8/437 (1%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           ++N  +  L K  ++ + +  Y EM+      +  T+N +I AL K   ++ A+ +   M
Sbjct: 13  SYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM 72

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
               + PN   +N I++  C  G  E A+ +FRKM     D + P+ VT+N +++  CK 
Sbjct: 73  ----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKM---CSDGIEPDVVTYNSLMDYLCKN 125

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G+   A +I  +M+K G+  ++ TY TL+ GYA  G+  E   L   MV+ G+  ++ V+
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  I     +  V+  + V S M  + + P+   Y  +  GLC+ G +  A     Q+++
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  +   Y  LI+ LC  +    A++L+  ++ +G+ P+I+ + T++D  CK G +  
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIE 305

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           + ++++ +  +   P+++ Y+++I+G C    +D A  LL     +GL  D++TY+TLIN
Sbjct: 306 SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLIN 365

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           GY    ++ +A A+F EM + G+  + + YNI+++ L +      A+EL   +   G   
Sbjct: 366 GYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQL 425

Query: 602 DYVTYTTLVTRFSKNCS 618
           +  TY  ++  F+K  S
Sbjct: 426 ELSTYNIILMDFAKTNS 442



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 204/402 (50%), Gaps = 8/402 (1%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P+VV +N II+   + GD++ A   + +M       V P++VT+N II    K   ++ A
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEM---LDRRVSPDAVTYNSIIAALSKAQAMDRA 65

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            E+   M+      N  TY +++ GY   G SE+A+ +  +M   G+ P+ V YNS + +
Sbjct: 66  MEVLTVMVMP----NCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L   G    A  +   M+ + + PD  TY  L  G    G + +   L   +++  M  D
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
            + +NILI    K   +     + S M  +GL P+ + Y T+IDG CK G ++ A+  +E
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            M      PN+V+Y S+I+ LC     + A+ L+      G+  + + +NT+++     G
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ E+  +F  + ++G+  + + Y+ LI+  C  G    A +L+  M+  G+ PD VTY+
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYS 361

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           TL+  + K    E+ + L  +M  +GV+PD  TYN I+  L 
Sbjct: 362 TLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLF 403



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 6/304 (1%)

Query: 350 MVKRGLMPNNVV-YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           M   G  P +VV YN+ I  LF EGDV+ A     +M+D+ + PD  TY+ +   L +  
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSK-- 58

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
              QA     +VL   ++ + ++YN +++  C S     A  +   M   G+ PD++TY 
Sbjct: 59  --AQAMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           +L+D  CK G    A +++++M K   KP++  Y ++++G     +L     LL    + 
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+ LD   +N LI  Y    K+ E   +FS+MR  G+  N V Y  +I+ LCK G    A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
               + MI  G+ P+ V YT+L+         E+  EL  +++  G++P+   +N I+  
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 648 LLGE 651
           L  E
Sbjct: 297 LCKE 300



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 172/370 (46%), Gaps = 7/370 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++++      G +E A  + +K+   G    +  +N+ + +L K  +     K++  M
Sbjct: 79  TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V  G   ++ T+  +++    +  L E   L   M+++G+  +   FN++I    +   +
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKV 198

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  + +F KM       + PN+V +  +I+G CKLGR++ A      MI  G+  NV  Y
Sbjct: 199 DEVVLVFSKM---RQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVY 255

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV--EGALFVLSDM 385
            +LI         E+A  L  E++ +G+ PN V +N+ +  L  EG V     LF L   
Sbjct: 256 TSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGH 315

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I   + PD  TYS L  G C  G +  A KL   ++   +  D+ +Y+ LIN  CK N +
Sbjct: 316 IG--VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRM 373

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  L   M   G+ PDIITY  ++ G  +      A ++Y  + +   +  L  YN I
Sbjct: 374 EDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433

Query: 506 INGLCKDASL 515
           +    K  SL
Sbjct: 434 LMDFAKTNSL 443



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 112/200 (56%), Gaps = 9/200 (4%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD+++Y T+IDG  K G+++ A   Y  M      P+ V YNSII  L K  ++D A  +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           L     + + +  TYN++++GY  +G+  +A  +F +M + GI  + V YN L+++LCK 
Sbjct: 69  LTV---MVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD---DMVLSGVSPDN 638
           G   +AR++   M+  G+ PD  TY TL+  ++   S   ++E+HD    MV +G+  D+
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYA---SKGALVEMHDLLALMVQNGMQLDH 182

Query: 639 QTYNAIISPLLGEKSAEDQV 658
             +N +I     ++  ++ V
Sbjct: 183 HVFNILICAYTKQEKVDEVV 202



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 22/197 (11%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK--------------- 143
           +++H L  + +++ A  L+  ++       + F   +LDS  +CK               
Sbjct: 257 SLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS--LCKEGRVIESKKLFDLLG 314

Query: 144 ---ATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
                P V  +  L+      G  +GA  ++  +   G       ++  ++   K+N + 
Sbjct: 315 HIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRME 374

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
               L+KEM S G   ++ T+N++++ L +  +   A  LY R+ +SG    +  +N+I+
Sbjct: 375 DALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIIL 434

Query: 259 NEACQVGDLEFALKLFR 275
            +  +   L      FR
Sbjct: 435 MDFAKTNSLMMHFGCFR 451


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 244/483 (50%), Gaps = 5/483 (1%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           K  +  I  +N  LS LVK         L+++M   G V +  TFN++I    +      
Sbjct: 64  KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           + S++ ++LK G  PN + FN +I   C  G +  AL    K+ V  G  +  + V++  
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKV-VAQGFHL--DQVSYGT 180

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +ING CK+GR+  A ++   +    +  N   Y  +ID   +     +A  L  +MV + 
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + P++   NS I+     G ++ A+ +L  MI ++I P  +T+SIL    C+ G VK+A 
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +    +++ ++ D  +YN L++  C    +  AK +  SM  RG+I ++ +Y T+I+G 
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGL 360

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDA 533
           CK   ++ AV ++E M+  +  PN+V YNS+I+GL K   +     L+ +   R    + 
Sbjct: 361 CKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNI 420

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           ITYN++++    N  + +A A+ + +++ GI  +   Y +LI  LC+ G  + A+++ + 
Sbjct: 421 ITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFED 480

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           +++ G   D  TYT ++  F      +  + L   M  +G  P+ +TY  +I  L  EK 
Sbjct: 481 LLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLF-EKD 539

Query: 654 AED 656
             D
Sbjct: 540 END 542



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 245/500 (49%), Gaps = 7/500 (1%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP +  F+ ++ +  +      A  + Q++++ G       +N  ++   +L      + 
Sbjct: 67  TPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS 126

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +++  G+  N  TFN +I  LC +  + +AL+ + +++  G   + V +  +IN  C
Sbjct: 127 VFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLC 186

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +VG +  AL+L ++   + G  V PN+V +N II+  CK   V  A ++   M+   I  
Sbjct: 187 KVGRITAALQLLKR---VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  T  +LI G+   G  +EA+ L  +M+   + P    ++  +     EG V+ A  +L
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
              + K I  D  TY+ L  G C    + +A  + + +    ++ +  SY  +IN LCK 
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  L   M  R +IP+++TY +LIDG  K G I   +++ + M    + PN++ Y
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITY 423

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           NSI++ LCK+  +D A +LL   +  G+  D  TY  LI G   +GK+ +A  +F ++  
Sbjct: 424 NSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLV 483

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G  ++   Y ++I   C  G +  A  L+  M  +G IP+  TY  ++    +    + 
Sbjct: 484 KGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDM 543

Query: 622 VIELHDDMVLSGVSPDNQTY 641
             +L  +M+  G+  D ++Y
Sbjct: 544 AEKLLREMIARGLL-DEKSY 562



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 230/466 (49%), Gaps = 5/466 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+   +Q+G    ++ V  K+  KG   +   +N  +  L     I +    + ++
Sbjct: 107 TFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKV 166

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G+  +  ++  +I  LCK  ++  AL L  R+    + PN V +NMII+  C+   +
Sbjct: 167 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 226

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L+ +   M    + P+  T N +I GFC +G+++ A  + + MI   I+  + T+
Sbjct: 227 NDAFDLYSQ---MVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTF 283

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + L+D + + G  +EA  +    +K+ ++ + V YNS +       ++  A  +   M  
Sbjct: 284 SILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMAS 343

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  +  +Y+ +  GLC+   V +A  L  ++    ++ +  +YN LI+ L K   ++ 
Sbjct: 344 RGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISC 403

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
             +L+  M  RG  P+IITY +++D  CK  +++ A+ +  N+K    +P++  Y  +I 
Sbjct: 404 VLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIK 463

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC+   L+ A+ + +     G  LD  TY  +I G+ + G    A A+ S+M + G   
Sbjct: 464 GLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIP 523

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
           N   Y I+I  L +      A +L++ MI  G++ D  +Y  L ++
Sbjct: 524 NAKTYEIVILSLFEKDENDMAEKLLREMIARGLL-DEKSYIYLASK 568



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 3/304 (0%)

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P  + +N  +  L        AL +   M    I  D FT++IL     + G    +F +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++L++    +A ++N LI  LC   ++  A      ++ +G   D ++YGTLI+G CK
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAI 534
            G I  A+Q+ + +     +PN V+YN II+ +CK   ++ A  L     ++RI   D  
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP-DDF 246

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           T N+LI G+ I G++ EA  +  +M    I      ++IL++  CK G  ++A+ ++ V 
Sbjct: 247 TCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVT 306

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           +   II D VTY +L+  +       +  ++ D M   GV  + Q+Y  +I+ L   K  
Sbjct: 307 MKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMV 366

Query: 655 EDQV 658
           ++ V
Sbjct: 367 DEAV 370


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 217/410 (52%), Gaps = 7/410 (1%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNE---IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +G S+    ++ F+S L        +     L  +M S G+V ++  FN  +  LC++ +
Sbjct: 75  RGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNR 134

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           LE AL L++ M   G  P+VV + +II+  C     + A K++R++ +  G S  P+   
Sbjct: 135 LETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL-IDKGLS--PDYKA 191

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
              ++ G C  GRV+ A E+   +IK G+  N   Y  LIDG+ R G  ++A+++   M 
Sbjct: 192 CVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMS 251

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           + G +P+ V YN  +++   EG V+ A+ ++  M    + PD ++Y+ L KG C+   V 
Sbjct: 252 RTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVD 311

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  +  + ++   + D  SYN +I   CK+       +L   M  +G+ PD++T+  LI
Sbjct: 312 RAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILI 371

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           D + + G+     ++ + M K+   P+ + Y ++++ LCK+  +D A S+ +     G+ 
Sbjct: 372 DAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVN 431

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            D I+YN L+NG+    ++ +A  +F EM++ G+  ++V Y +++  L +
Sbjct: 432 PDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIR 481



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 205/428 (47%), Gaps = 6/428 (1%)

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I  L K   + +A+ L+ +M +S      V +N  I    +   L  A   +R+  +  G
Sbjct: 17  ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76

Query: 283 DSVLPNSVTHNCIINGFCKLGR---VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            S+LP   T++  I+  C       +     +   M   G   ++  + T ++   R   
Sbjct: 77  FSLLP--FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNR 134

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            E AL L   M  +G  P+ V Y   I  L      + A  V   +IDK + PD+     
Sbjct: 135 LETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVA 194

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC  G V  A++L   V++  +  ++  YN LI+  C+   +  A ++ + M   G
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +PD++TY  L++  C+ G ++ AV++ E M++   +P+L  YN ++ G CK   +D A 
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314

Query: 520 SLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            ++ +  Q  G+ D ++YNT+I  +    +  + + +F EM   GI  + V +NILI+  
Sbjct: 315 LMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAF 374

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
            + G     ++L+  M    ++PD + YT +V    KN   +    +  DMV +GV+PD 
Sbjct: 375 LREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDV 434

Query: 639 QTYNAIIS 646
            +YNA+++
Sbjct: 435 ISYNALLN 442



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 207/474 (43%), Gaps = 43/474 (9%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKE-MVSCGYVENVNTFNLVIYALCK---ECKLEEALSLY 239
           +N F+  L++ + +      Y+  ++  G+     T++  I ALC       L    SL 
Sbjct: 48  YNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLL 107

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M   G  P++  FN  +N  C+   LE AL+LF  M     D   P+ V++  II+  
Sbjct: 108 LDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRD---PDVVSYTIIIDAL 164

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           C   R + A ++   +I  G+  + +    L+ G   GG  + A  L   ++K G+  N+
Sbjct: 165 CNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNS 224

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           +VYN+                                   L  G CR G V +A K+   
Sbjct: 225 LVYNA-----------------------------------LIDGFCRMGRVDKAMKIKAF 249

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +     V D  +YNIL+NY C+   +  A +L+ +M   G+ PD+ +Y  L+ G+CK   
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
           ++ A  +     + +   ++V YN++I   CK         L +     G+  D +T+N 
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI+ +   G       +  EM  + +  + + Y  +++ LCK G    A  + + M+ +G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           + PD ++Y  L+  F K     + + L D+M   G+ PD  TY  I+  L+  K
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGK 483



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 3/347 (0%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           + A  V ++L  KG S    A    +  L     +   ++L   ++  G   N   +N +
Sbjct: 171 DEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNAL 230

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I   C+  ++++A+ +   M ++G  P++V +N+++N  C+ G ++ A++L      M  
Sbjct: 231 IDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVE---TMER 287

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
             V P+  ++N ++ GFCK   V+ A  +    ++    C+V +Y T+I  + +   + +
Sbjct: 288 SGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRK 347

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
              L +EM  +G+ P+ V +N  I     EG       +L +M    + PD   Y+ +  
Sbjct: 348 GYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVD 407

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
            LC+NG V  A  +   ++E  +  D  SYN L+N  CK++ +  A  L   M  +GL P
Sbjct: 408 HLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYP 467

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           D +TY  ++ G  +G  I  A +V++ M +     N  +  +++N +
Sbjct: 468 DEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/404 (23%), Positives = 187/404 (46%), Gaps = 41/404 (10%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G    I A+N +L+ L + N +    +L+  M S G   +V ++ ++I ALC   + +EA
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173

Query: 236 LSLYYRMLKSGIWP-----------------------------------NVVCFNMIINE 260
             ++ R++  G+ P                                   N + +N +I+ 
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDG 233

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C++G ++ A+K+      MS    +P+ VT+N ++N  C+ G V+ A  +   M ++G+
Sbjct: 234 FCRMGRVDKAMKI---KAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGV 290

Query: 321 DCNVRTYATLIDGYARGGSSEEA-LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           + ++ +Y  L+ G+ +    + A L + + M  +G M + V YN+ I             
Sbjct: 291 EPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG-MCDVVSYNTVITAFCKARRTRKGY 349

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +  +M  K I PD  T++IL     R G      KL +++ +  ++ D   Y  ++++L
Sbjct: 350 ELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHL 409

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+  +  A  +   M+  G+ PD+I+Y  L++G+CK   +  A+ +++ M+     P+ 
Sbjct: 410 CKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDE 469

Query: 500 VIYNSIINGLCKDASLD-AAKSLLQASQRIGLLDAITYNTLING 542
           V Y  I+ GL +   +  A +   Q  +R   L+     TL+N 
Sbjct: 470 VTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 164/385 (42%), Gaps = 48/385 (12%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M ++ I  +   Y + I    + G   +A+ L D+M +      +V YN  I  L     
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHS- 59

Query: 375 VEGALFVLSDMIDKHICPD-----HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG-- 427
               L +      +H+ P       FTYS     LC          +H+ +L+   +G  
Sbjct: 60  ---RLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFV 116

Query: 428 -DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D +++N  +N LC+ N L  A +L  SM  +G  PD+++Y  +ID  C     + A +V
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           +  +      P+     +++ GLC    +D A  L+    + G+ ++++ YN LI+G+  
Sbjct: 177 WRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY-- 603
            G++ +A  + + M   G   + V YNIL+N+ C+ G   +A  L++ M   G+ PD   
Sbjct: 237 MGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYS 296

Query: 604 ---------------------------------VTYTTLVTRFSKNCSPEEVIELHDDMV 630
                                            V+Y T++T F K     +  EL ++M 
Sbjct: 297 YNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMC 356

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
             G+ PD  T+N +I   L E S  
Sbjct: 357 GKGIRPDMVTFNILIDAFLREGSTH 381



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 58/403 (14%)

Query: 77  ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
           ALE +  +    R    + S   I+  L N +RFD+A  +   L+           +GL 
Sbjct: 138 ALELFHSMPSKGR-DPDVVSYTIIIDALCNAKRFDEAAKVWRRLID----------KGLS 186

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
             Y+ C A       LV      G  + AY+++  +   G  V+   +N  +    ++  
Sbjct: 187 PDYKACVA-------LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGR 239

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           + +  K+   M   G V ++ T+N+++   C+E  ++EA+ L   M +SG+ P++  +N 
Sbjct: 240 VDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNE 299

Query: 257 IINEACQVGDLEFA-LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM 315
           ++   C+   ++ A L +  +M        + + V++N +I  FCK  R     E+   M
Sbjct: 300 LLKGFCKANMVDRAHLMMVERMQTKG----MCDVVSYNTVITAFCKARRTRKGYELFEEM 355

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
              GI  ++ T+  LID + R GS+    +L DEM K  ++P+ + Y + +  L   G V
Sbjct: 356 CGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKV 415

Query: 376 EGALFVLSDMID-----------------------------------KHICPDHFTYSIL 400
           + A  V  DM++                                   K + PD  TY ++
Sbjct: 416 DVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLI 475

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
             GL R   +  A ++ +Q++E     + +    L+N +  S+
Sbjct: 476 VGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAIQSSD 518



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 123/318 (38%), Gaps = 48/318 (15%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M +  +  + + Y S I  L   G +  A+++   M + +       Y+     L R+  
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRH-- 58

Query: 410 VKQAFKLHNQVLEEHMVGDAYS-----YNILINYLCKSNN---LAAAKQLLSSMIVRGLI 461
                 L +     H++   +S     Y+  I+ LC + N   L     LL  M   G +
Sbjct: 59  --SRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFV 116

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PDI  + T ++  C+   +E A++++ +M    + P++V Y  II+ LC     D A  +
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176

Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
            +     GL  D      L+ G    G++  A+ +   +   G+ VN + YN LI+  C+
Sbjct: 177 WRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCR 236

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A   MK+                                   M  +G  PD  T
Sbjct: 237 MGRVDKA---MKIKAF--------------------------------MSRTGCVPDLVT 261

Query: 641 YNAIISPLLGEKSAEDQV 658
           YN +++    E   ++ V
Sbjct: 262 YNILLNYCCEEGMVDEAV 279


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++     + 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           +L+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 NLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  +  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVV 417



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 153/278 (55%), Gaps = 1/278 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G+ +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L   M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
            I TY  +IN +   G +     +  EM+  G A + V
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVV 417



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L       GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G +P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAP 414



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     G++
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G  P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K GN++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  NL    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 233/476 (48%), Gaps = 4/476 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A++++ ++++KG   +   +  +L  L +  ++   W   + +   G   N   FN VI 
Sbjct: 230 AFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQ 289

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
             C+E +++EA+ ++  M K G+ P+   ++++++  C+ GD+     L  +M   + + 
Sbjct: 290 GFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEM---ARNG 346

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           + P  V+++ +++G C+ G+VE A E+   + + G   +   Y+ +++G  +  + E   
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVC 406

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L ++MV    +P+   Y S I+      ++  AL V   M+D  + P+  T +IL  G 
Sbjct: 407 DLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGF 466

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            +   + +AF   ++V +  +V +   Y ++IN LCK N       + + MI RG +PD 
Sbjct: 467 GKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDT 526

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           + Y  +ID + K   +  A +++  M     KPN+  Y S+INGLC D  L    +L + 
Sbjct: 527 VVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKH 586

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
               GL  D I Y +LI  Y     +  A  +F  M  +G++ +   Y  LI    K   
Sbjct: 587 MIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLA 646

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
              A+ LM+ M   G+ P  VTYT L+  + K     +    ++ M+ +G++PD +
Sbjct: 647 MDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAK 702



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 235/501 (46%), Gaps = 8/501 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+  ++R   ++   E A  ++   + K   V +   N  L  LV+ N+I     L+ +M
Sbjct: 143 VYATIIRIFVELSMFEDA--LLTYTEAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDM 200

Query: 208 VSCGYVENVNTFNLVI--YALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            S G   NV ++++++  Y       L EA  L   M   G+ PN   +   +    +  
Sbjct: 201 KSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTR 260

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +  A   F +M    G+    N+   N +I GFC+ G+V+ A E+  AM K G+  +  
Sbjct: 261 QVASAWN-FLQMLCQRGNPC--NTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTH 317

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           +Y+ L+DG  + G       L  EM + G+ P  V Y+S +H L   G VE A  +   +
Sbjct: 318 SYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRL 377

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
            ++    DH  YSI+  G C++  ++    L N ++  + V DAY+Y  LI   C+  NL
Sbjct: 378 EEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNL 437

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  +   M+  G+ P+++T   L+DG+ K   I+ A      +++    PNL +Y  I
Sbjct: 438 TDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVI 497

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           INGLCK    D    +     + G + D + Y+ +I+ +    K+ EAF +F +M + G 
Sbjct: 498 INGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGT 557

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
             N   Y  LIN LC      +   L K MI  G+ PD + YT+L+  + K  + +  +E
Sbjct: 558 KPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALE 617

Query: 625 LHDDMVLSGVSPDNQTYNAII 645
           +   M   G+S D   Y  +I
Sbjct: 618 IFRGMGKLGLSADAFLYTCLI 638



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 206/418 (49%), Gaps = 4/418 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+A+++   + G  + A +V   +K  G     H+++  +  L K  ++   + L  EM 
Sbjct: 284 FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMA 343

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G    + +++ +++ LC+  K+E A  L+ R+ + G   + + +++I+N  CQ  ++E
Sbjct: 344 RNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIE 403

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
               L+  M      + +P++  +  +I  FC+   +  A  +   M+ +G+  NV T  
Sbjct: 404 VVCDLWNDM---VHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCT 460

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+DG+ +    +EA     ++ + G++PN  +Y   I+ L      +    + +DMI +
Sbjct: 461 ILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKR 520

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD   YSI+     +   + +AF+L +++L+E    + ++Y  LIN LC  + L   
Sbjct: 521 GYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEV 580

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L   MI  GL PD I Y +LI  YCK  N++ A++++  M K+    +  +Y  +I G
Sbjct: 581 VTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGG 640

Query: 509 LCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
             K  ++D A+ L++     GL  + +TY  LI GYF  G   +A   ++ M   GI 
Sbjct: 641 FSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGIT 698



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 191/429 (44%), Gaps = 35/429 (8%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N ++  L +  ++  A SL+  M  SG  PNV  ++++++ A   GD  +  + F  +  
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMS-AYTHGDRLYLAEAFELLSE 236

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M    V PN+ T+   + G  +  +V  A      + + G  CN   +  +I G+ R G 
Sbjct: 237 MEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQ 296

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA+ + D M K GL+P+   Y+  +  L  +GDV     +L +M    I P   +YS 
Sbjct: 297 VQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSS 356

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLCR G V+ AF+L  ++ E+    D   Y+I++N  C+  N+     L + M+   
Sbjct: 357 LLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHN 416

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +PD   Y +LI  +C+  N+  A+ V+E M      PN+V    +++G  K+  +D   
Sbjct: 417 FVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMID--- 473

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
                                          EAF    ++R  GI  N   Y ++IN LC
Sbjct: 474 -------------------------------EAFLFLHKVRQFGIVPNLCMYRVIINGLC 502

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K         +   MI  G +PD V Y+ ++  F K     E   L   M+  G  P+  
Sbjct: 503 KVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVF 562

Query: 640 TYNAIISPL 648
           TY ++I+ L
Sbjct: 563 TYTSLINGL 571



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 170/369 (46%), Gaps = 5/369 (1%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T   + +L+    + G  E A+++ ++L+ +G       ++  L+   +   I     L+
Sbjct: 350 TLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLW 409

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            +MV   +V +   +  +IYA C+   L +AL ++  ML SG+ PNVV   ++++   + 
Sbjct: 410 NDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKE 469

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             ++ A     K+       ++PN   +  IING CK+ + +    I   MIK G   + 
Sbjct: 470 RMIDEAFLFLHKVRQFG---IVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDT 526

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             Y+ +ID + +     EA RL  +M+  G  PN   Y S I+ L  +  +   + +   
Sbjct: 527 VVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKH 586

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           MI + + PD   Y+ L    C+   +K A ++   + +  +  DA+ Y  LI    K   
Sbjct: 587 MIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLA 646

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ L+  M  +GL P ++TY  LI GY K G+   A   Y +M +    P+  +  S
Sbjct: 647 MDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKL--S 704

Query: 505 IINGLCKDA 513
            I G   DA
Sbjct: 705 CILGFGNDA 713



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 162/336 (48%), Gaps = 5/336 (1%)

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           ++ YAT+I  +      E+AL    E  K G+     + N  +  L     +  A  +  
Sbjct: 141 LQVYATIIRIFVELSMFEDALLTYTEAKKVGVELQ--LCNFLLKCLVERNQIIYARSLFD 198

Query: 384 DMIDKHICPDHFTYSILTKGLCRNG--CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           DM      P+ ++YS+L           + +AF+L +++  + +  +A +Y   +  L +
Sbjct: 199 DMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSR 258

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +  +A+A   L  +  RG   +   +  +I G+C+ G ++ A++V++ MKK    P+   
Sbjct: 259 TRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHS 318

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+ +++GLCK   +     LL    R G+    ++Y++L++G    GK+  AF +F  + 
Sbjct: 319 YSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLE 378

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G   + + Y+I++N  C+    +   +L   M+ H  +PD   YT+L+  F ++ +  
Sbjct: 379 EQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLT 438

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           + + + + M+ SGVSP+  T   ++     E+  ++
Sbjct: 439 DALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDE 474


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 218/414 (52%), Gaps = 4/414 (0%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDALVR 154
           S C ++H L   +   +A  L+  ++S     S       +L++    ++   VF  L+ 
Sbjct: 2   SYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLIT 61

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           A  + G    A +  +  +     V        L HL+KL      W  Y+E++ CGY  
Sbjct: 62  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++GDL+     F
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG---F 178

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           R    M    V P+  T++ +ING CK  +++ A  +   M+  G+  N  T+ TLIDG+
Sbjct: 179 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGH 238

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD++ A  ++ +M  K + PD 
Sbjct: 239 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 298

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           FTY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ LC+      A+++L  
Sbjct: 299 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 358

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           M+  GL PD  TY  +++ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 359 MLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 161/285 (56%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 127 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 186

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++GA  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 187 SGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL PD  TY TLID
Sbjct: 247 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLID 306

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 307 GCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 366

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  ++N +   G + +   +  EM+  G A + V YN+L+N
Sbjct: 367 DTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 411



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A  L   M+V+GL+P+ +T+
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 231

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 291

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 292 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 351

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT +V  F K     +  +L  +M   G +P   TYN +++
Sbjct: 352 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 411



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 105 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 164

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 165 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGL 224

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 225 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 284

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD  TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 285 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 344

Query: 650 GEKSAED 656
            E  + D
Sbjct: 345 QEGRSVD 351



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 54/273 (19%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVR------------------GLIPDIITYGTLI 471
           +SY  +I++LC    L+ AK L+  ++ R                      DI  +  LI
Sbjct: 1   HSYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLI 60

Query: 472 DGYCKGGNIEGAVQVY-------------------ENMKKVE----------------KK 496
             Y + G +  A++ Y                   E++ K++                  
Sbjct: 61  TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
            +L  +N +++  CKD  +  A+S+  A  + GL  + ++YNTL+NGY   G + E F +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            S M   G+  +   Y++LIN LCK      A  L   M++ G++P+ VT+TTL+    K
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           N   +  +E++  M+   + PD  TYN +I  L
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 273


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 217/417 (52%), Gaps = 4/417 (0%)

Query: 93  SLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDA 151
           +L S C ++H L   +   +A  L+  ++S     S       +L++    ++   VF  
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSG 60

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+ A  + G    A +  +  +     V        L HL+KL      W  Y+E++ CG
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECG 120

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           Y  ++  FN++++  CKE  +  A S++  + K G+ P+VV +N +++   ++GDL+   
Sbjct: 121 YPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEG- 179

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
             FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+     T+ TLI
Sbjct: 180 --FRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLI 237

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           DG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GB++ A  ++ +M  K   
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXK 297

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+ LC+      A+++
Sbjct: 298 PDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 357

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           L  M+  G  PD  TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 358 LREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 1/299 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +Y+ L  G  R G
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLG 174

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L + +    +  D Y+Y++LIN LCK   +  A +L   M+V GL+P  +T+ 
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFT 234

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQR 527
           TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+ + S +
Sbjct: 235 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLK 294

Query: 528 IGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
               D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    A
Sbjct: 295 GXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDA 354

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            ++++ M+  G  PD  TYT ++  F K        +L  +M   G  P   TYN +++
Sbjct: 355 EKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  N+  A+ +  ++   GL P +++Y TL
Sbjct: 107 KLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTL 166

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           + GY + G+++   ++   M     +P++  Y+ +INGLCK+  +D A  L       GL
Sbjct: 167 MSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGL 226

Query: 531 LD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           +   +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA  
Sbjct: 227 VPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHV 286

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M L G  PD +TYTTL+    K    +   E    M+   +  D+  Y A+IS L 
Sbjct: 287 LIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLC 346

Query: 650 GEKSAED 656
            E  + D
Sbjct: 347 QEGRSVD 353


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 221/464 (47%), Gaps = 4/464 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+ A    G    +   +  L   G +   HA+ +F+    +   +    +L+  M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G V    T+  +++ LC    + EA+S++  M   G  P+   +  +++  C  G  
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L         +   PN V +N +I+G+C +G +E A ++   M   G   NVRTY
Sbjct: 194 REAETLLSDA---MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G+ +    + A+ L   MV  GL+PN V Y + I    ++G ++ A  +L  M +
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+ +T S+L   LC++  V +A  L   ++++ +  +   Y  LI+ LCK+   AA
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L+ +++ +G +PD  TY +LIDG C+   +  A+ V ++M +   +P+ V Y  II+
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L ++   D +K +L      G+  D  TY   +  Y   G++ +A  M   M + G+  
Sbjct: 431 ELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           N V YN LI      G   QA    K M+ +G  P+  +YT L+
Sbjct: 491 NLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 179/369 (48%), Gaps = 1/369 (0%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N  T+  +IN +C  G +  ++    ++++AG   +   Y + + GY R G    A RL 
Sbjct: 71  NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             M  RG +     Y + +H L   G V  A+ V + M      PD   Y+ +  GLC  
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G  ++A  L +  + E    +   YN LI+  C   +L  A  +   M V G  P++ TY
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTY 250

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI G+CK   ++ A+ ++  M      PN+V Y ++I G C D  LD A  LLQ+ + 
Sbjct: 251 TELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMEN 310

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL+ +  T + LI+    + ++ EA  +   +   GI VN++ Y  LI+ LCK G +  
Sbjct: 311 SGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAA 370

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A  LM+ ++  G +PD  TY++L+    +     E + + DDM+  GV P   TY  II 
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 647 PLLGEKSAE 655
            L+ E  A+
Sbjct: 431 ELVREVGAD 439



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 232/536 (43%), Gaps = 55/536 (10%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           + ++G   +   +   L  L     +     ++  M + G   + + +  +++ LC   +
Sbjct: 133 MPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
             EA +L    +  G  PNVV +N +I+  C VGDLE A+ +F +M V   +   PN  T
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDV---NGCSPNVRT 249

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  +I+GFCK  +++ A  +   M+ AG+  NV TY  LI G    G  + A RL   M 
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
             GL+PN    +  I  L     V  A  +L  +I K I  +   Y+ L  GLC+ G   
Sbjct: 310 NSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA 369

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A +L   ++ +  V DA++Y+ LI+ LC+   L+ A  +L  M+ +G+ P  +TY  +I
Sbjct: 370 AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIII 429

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           D   +    +G+ ++ + M     KP++  Y   +   C +  ++ A+ ++      G+ 
Sbjct: 430 DELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVC 489

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK---------- 580
            + +TYN LI GY   G  ++AF+ F  M   G   N+  Y +L+  L K          
Sbjct: 490 PNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPAN 549

Query: 581 -------------------------------FGCY----------QQARELMKVMILHGI 599
                                          + C+           +A+ L+  M    +
Sbjct: 550 SVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANL 609

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
            P    YT+++    +     E +   D MV SG  P  ++Y  IIS L  E S +
Sbjct: 610 TPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQ 665



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/449 (24%), Positives = 205/449 (45%), Gaps = 4/449 (0%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           ++  G+  + + +   +   C+   L  A  L+  M   G       +  +++  C  G 
Sbjct: 98  LLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGM 157

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A+ +F     M  D   P+   +  +++G C  GR   AE +    +  G + NV  
Sbjct: 158 VREAMSVF---AGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  LIDGY   G  E A+ + + M   G  PN   Y   I        ++ A+ + S M+
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           D  + P+  TY+ L +G C +G +  A++L   +    +V + ++ ++LI+ LCK   + 
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A+ LL S+I +G+  + I Y +LIDG CK G    A ++ + +      P+   Y+S+I
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLC+   L  A  +L      G+  + +TY  +I+          +  +  +M   GI 
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   Y I +   C  G  + A  +M  M+ HG+ P+ VTY  L+  ++      +    
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
              MV +G  P+ ++Y  ++  L+ ++S+
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLIKKESS 543



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 200/455 (43%), Gaps = 49/455 (10%)

Query: 108 RRFDDALLLMGNLMSA----NSVSPLEFLEG------------LLDSYEICKATP----- 146
           R+ D A++L   ++ A    N V+    ++G            LL S E     P     
Sbjct: 261 RKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTC 320

Query: 147 -AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             + DAL +   ++G    A  ++  L  KG  V+   + + +  L K        +L +
Sbjct: 321 SVLIDALCKH-ERVGE---AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQ 376

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
            +VS G+V + +T++ +I  LC++ +L EA+ +   M++ G+ P+ V + +II+E  +  
Sbjct: 377 TLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREV 436

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
             + + K+  KM + +G  + P+  T+   +  +C  GR+E AE +   M+  G+  N+ 
Sbjct: 437 GADGSKKILDKM-IAAG--IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLV 493

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPN------------------NVVYNSTIH 367
           TY  LI GYA  G + +A      MV  G  PN                  N+  NS   
Sbjct: 494 TYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSI 553

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
           W  AE      L  L +M+   +  +   Y+     LCR   + +A  L  ++   ++  
Sbjct: 554 WKIAEMKYLHGL--LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTP 611

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
               Y  +I   C+   L  A   + SM+  G IP + +Y  +I   C+ G+I+ A QV+
Sbjct: 612 SEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVF 671

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
            +M   E     + +  +I+GL +   +    SLL
Sbjct: 672 GDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLL 706



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 154/402 (38%), Gaps = 80/402 (19%)

Query: 95  ESSCAI-VHLLVNWRRFDDALLLMGNLMS----ANSVSPLEFLEGLLDSYEICKATP-AV 148
           E +C++ +  L    R  +A LL+G+L+      N +     ++GL      CKA   A 
Sbjct: 317 EWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL------CKAGRFAA 370

Query: 149 FDALVRACTQIGATEGAYD-------------------VIQKLKVKGHSVSIHAWNNFLS 189
            D L++     G    A+                    V+  +  KG   S   +   + 
Sbjct: 371 ADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIID 430

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
            LV+        K+  +M++ G   +V T+ + + + C E ++E+A  +   M+  G+ P
Sbjct: 431 ELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGV--------------------MSGDSVLPNS 289
           N+V +N +I     +G    A   F+ M                       S +++  NS
Sbjct: 491 NLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANS 550

Query: 290 VT----------------------------HNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           V+                            +NC +   C++ R++ A+ +   M  A + 
Sbjct: 551 VSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLT 610

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +   Y ++I    R     EAL   D MVK G +P    Y   I  L  EG ++ A  V
Sbjct: 611 PSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQV 670

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
             DM+ K    +   + IL  GL + G V +   L + V+EE
Sbjct: 671 FGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLS-VMEE 711


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 156/581 (26%), Positives = 279/581 (48%), Gaps = 46/581 (7%)

Query: 106 NWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGA 165
            WR    AL  M     + S + L   + L + +  C  +  ++DAL  +  +      A
Sbjct: 97  RWREMRGALAQMVTEQGSGSAAIL--CDILRNGFRECDPSSIMWDALANSYARAQMIHDA 154

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
             V+ K+      +S+  +++ L  L ++ ++    +L++EM + G  ++  + +++I  
Sbjct: 155 LYVLSKMNSLNMQISVSTYDSLLYGL-RMTDMA--LELFEEMEAYGISKSEYSHSIIIDG 211

Query: 226 LCKECKLEEALSLYYR------------------------------------MLKSGIWP 249
           LCK+ K+ EALS                                        MLK G+ P
Sbjct: 212 LCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNP 271

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           +   ++ +I+  C++G L+ A+ LF ++   + + +   +VT+N +ING+  LG      
Sbjct: 272 DRYTYSTLIHGLCKIGFLDEAVDLFERV---TEEGMKLETVTYNSLINGYRLLGLTREVP 328

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
           +I   M   GI+ ++ TY  LI G+   G  EE +++ ++++ +GL  N V Y+  ++ L
Sbjct: 329 KIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNAL 388

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL-EEHMVGD 428
           F +G V  A  +L ++    +  D   YSIL  G C+ G +++A ++ + +   + +V  
Sbjct: 389 FKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPT 448

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           + ++  ++  LCK   L  A+  L ++ V+    D++ Y  +IDGY K G+I  AV +Y+
Sbjct: 449 SLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYD 508

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFING 547
            +      P +V  NSI+ G CK   L AA+S  +A Q   LL   +TY TL++     G
Sbjct: 509 QIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAG 568

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           K+    ++  EM   GI  N + Y+++I  LCK   +  A   +  M   G+  D VTY 
Sbjct: 569 KVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYN 628

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           TL+  F +    +    +HD MV  G+ P   TYN +I+ L
Sbjct: 629 TLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVL 669



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 254/570 (44%), Gaps = 76/570 (13%)

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN-TFN 220
           T+ A ++ ++++  G S S ++ +  +  L K +++G      +E       + +  +FN
Sbjct: 183 TDMALELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFN 242

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           +++ ALC    ++ A S    MLK G+ P+   ++ +I+  C++G L+ A+ LF ++   
Sbjct: 243 VLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERV--- 299

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
           + + +   +VT+N +ING+  LG      +I   M   GI+ ++ TY  LI G+   G  
Sbjct: 300 TEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDV 359

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           EE +++ ++++ +GL  N V Y+  ++ LF +G V  A  +L ++    +  D   YSIL
Sbjct: 360 EEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSIL 419

Query: 401 TKG------------------------------------LCRNGCVKQAFKLHNQVLEEH 424
             G                                    LC+ G + +A      V  ++
Sbjct: 420 IHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKY 479

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
             GD   YN++I+   K  +++ A  L   +++ G+ P I+T  +++ GYCK G+++ A 
Sbjct: 480 QPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAE 539

Query: 485 QVYENMK---------------------------------KVEK--KPNLVIYNSIINGL 509
             +  ++                                  VEK  KPN + Y+ +I GL
Sbjct: 540 SYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGL 599

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK+     A   L      G+  D +TYNTLI G+     I  AF +   M   GI    
Sbjct: 600 CKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTP 659

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V YN LIN LC  G   QA  L++ +   GI      YTTL+        P E I L   
Sbjct: 660 VTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGK 719

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           ++  G     + ++A I+ L   K A++ V
Sbjct: 720 LLDDGFETTVKDFSAAINRLCKRKFAKEAV 749



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 233/495 (47%), Gaps = 14/495 (2%)

Query: 131 FLEGLLDSYEIC-----KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           FL+  +D +E       K     +++L+     +G T     +IQ ++ +G    I  + 
Sbjct: 288 FLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYT 347

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             ++   +  ++    K+  +++  G   N+ T+++++ AL K+  + EA +L   +   
Sbjct: 348 ILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSI 407

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G+  +++ ++++I+  C++G++E AL++   M       V+P S+ H  I+ G CK G  
Sbjct: 408 GLDMDIIAYSILIHGYCKLGEIERALEVCDVM--CCSQKVVPTSLNHLSILVGLCKKG-- 463

Query: 306 EFAEEIRYAMIKAGID---CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
               E R+ +    +     +V  Y  +IDGYA+ G    A+ L D++V  G+ P  V  
Sbjct: 464 -LLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTC 522

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           NS ++     GD++ A      +    + P   TY+ L   L   G V     +  +++E
Sbjct: 523 NSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVE 582

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           + +  +A +Y+++I  LCK      A   L +M   G+  D +TY TLI G+C+  +I+ 
Sbjct: 583 KGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQM 642

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
           A  +++ M      P  V YN +IN LC    +  A+ LL++ +  G+ L    Y TLI 
Sbjct: 643 AFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIK 702

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
                G   EA ++F ++ + G       ++  IN LCK    ++A   +  M+  G+ P
Sbjct: 703 AECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFMLSAGVFP 762

Query: 602 DYVTYTTLVTRFSKN 616
           D   Y  LV    K 
Sbjct: 763 DTQVYYVLVRALQKR 777


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 214/417 (51%), Gaps = 13/417 (3%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +N+VI  LC+  +++EA+ ++ +M +  + P+   + ++I+   + G L  A  LF+K+ 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL- 349

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           + SG  V P++V +  +I+G C     + A E+   M + G   +  TY  +ID   + G
Sbjct: 350 LHSG--VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             EEA  L  +M++ G +P+ V YN+ +  L     VE AL + ++M      P+  +++
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467

Query: 399 ILTKGLCRN---------GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
            +  GLC+          G + +AF+L  ++ ++  V D  +Y+ LI+ LC    +  A+
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 527

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            LL  M+ R   P ++T  TLI G CK G I+ A +V + M    + P++V YN++++G 
Sbjct: 528 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 587

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C+    + A+ LL      GL  + +TY  L++G     ++ EA  +F++M++ G A N 
Sbjct: 588 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 647

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
             Y  LI   C  G      +L   M+  GI PD+V Y TL     K+      +E+
Sbjct: 648 FTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 704



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 237/480 (49%), Gaps = 19/480 (3%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY----- 239
           N  L       ++ +  +L + M       +  ++  V+  LCK  ++EEA+ L+     
Sbjct: 216 NVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDREL 275

Query: 240 -YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
                 S   P++  +N++I   CQ   ++ A+++F KM   +  +V P+S ++  +I+G
Sbjct: 276 PSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKM---NERNVSPDSWSYGILIDG 332

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
             K G++  A  +   ++ +G+  +   Y +LI G     S ++A  L  +M +RG  P+
Sbjct: 333 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 392

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V YN  I      G +E A  ++  MI+    PD  TY+ +  GLC++  V++A  L N
Sbjct: 393 PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 452

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ---------LLSSMIVRGLIPDIITYGT 469
           ++       +  S+N +I  LC+ + +  A Q         LL  M   G +PD++TY T
Sbjct: 453 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYST 512

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G C    ++ A  + E+M K + KP +V  N++I+GLCK   +  A+ +L A    G
Sbjct: 513 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 572

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
              D +TYNTL++G+   G+   A  + S+M   G+A N V Y  L++ LCK     +A 
Sbjct: 573 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 632

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            +   M   G  P+  TYT L+  F      +  ++L  +MV +G+SPD+  Y  + + L
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 692



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 239/505 (47%), Gaps = 26/505 (5%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G+ E A+ +++ + V   S    A+N  +  L K   +    +L + M          + 
Sbjct: 128 GSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSL 183

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           + V+  L    +++EAL +Y    +    P +V  N+++   C  G ++ A +L R    
Sbjct: 184 DSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLR---A 237

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFA------EEIRYAMIKAGIDCNVRTYATLIDG 333
           M  +   P+ V++  +++G CK GRVE A       E+  +   +    ++R Y  +I G
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             +    +EA+++ ++M +R + P++  Y   I  L   G +  A  +   ++   + P 
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y+ L  GLC       A +L   +          +YN++I+  CK   L  A  L+ 
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            MI  G +PD++TY T++DG CK   +E A+ ++  M+++   PN   +N+II GLC+ +
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 477

Query: 514 SLDAAKSLLQASQRIGLL----------DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            +D A    +  +   LL          D +TY+TLI+G     ++ +A  +  +M    
Sbjct: 478 KIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 537

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
                V  N LI+ LCK G  ++ARE++  M+  G  PD VTY TLV    +    E   
Sbjct: 538 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 597

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
           EL  DMV  G++P+  TY A++S L
Sbjct: 598 ELLSDMVARGLAPNVVTYTALVSGL 622



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 259/517 (50%), Gaps = 20/517 (3%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A  + ++ +V A  +    + A ++ + +  K   ++  + ++ L  L+    I    ++
Sbjct: 143 ANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQV 202

Query: 204 YKE--MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           Y+E     C     + T N+++   C   ++++A  L   M      P+ V +  +++  
Sbjct: 203 YRENRREPC-----LVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGL 257

Query: 262 CQVGDLEFALKLF--RKMGVMSGDSVLPNSVT-HNCIINGFCKLGRVEFAEEIRYAMIKA 318
           C+ G +E A++LF  R++   S  S  P S+  +N +I G C+  R++ A ++   M + 
Sbjct: 258 CKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNER 317

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            +  +  +Y  LIDG A+ G   +A  L  +++  G+ P+ V Y S IH L      + A
Sbjct: 318 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 377

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             + +DM  +   P   TY+++    C+ G +++A  L  +++E+  V D  +YN +++ 
Sbjct: 378 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 437

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI---------DGYCKGGNIEGAVQVYEN 489
           LCKS+ +  A  L + M   G  P+  ++ T+I         D  C+ G ++ A ++ + 
Sbjct: 438 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKR 497

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGK 548
           M      P++V Y+++I+GLC  A +D A+ LL+   +R      +T NTLI+G    G+
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR 557

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           I EA  +   M + G + + V YN L++  C+ G  ++AREL+  M+  G+ P+ VTYT 
Sbjct: 558 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 617

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           LV+   K     E   +   M  SG +P+  TY A+I
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 654



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 161/585 (27%), Positives = 271/585 (46%), Gaps = 46/585 (7%)

Query: 45  QRKWKILEQMAPSLTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVH 102
           +R +++LE M P   +S  N VV    K+ ++  ALE    + E  R   +  S  +++ 
Sbjct: 131 ERAFQLLEIM-PVANSSAYNIVVVALCKAARVDDALELARTMSEK-RIPLAAGSLDSVLV 188

Query: 103 LLVNWRRFDDALLLMGNLMSANSVSP-LEFLEGLLDSY----------EICKATP----- 146
            L++  R D+AL     +   N   P L  L  LL+ +          E+ +A P     
Sbjct: 189 GLMDSGRIDEAL----QVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECA 244

Query: 147 -------AVFDALVRACTQIGATE--GAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
                   V D L +A     A    G  ++           S+  +N  +  L + + I
Sbjct: 245 PDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRI 304

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
               +++++M       +  ++ ++I  L K  KL +A +L+ ++L SG+ P+ V +  +
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C     + A +LF  M   +     P+ VT+N +I+  CK G +E A ++   MI+
Sbjct: 365 IHGLCMANSFDDARELFADM---NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE 421

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE----- 372
            G   +V TY T++DG  +    EEAL L +EM + G  PN   +N+ I  L  +     
Sbjct: 422 DGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQ 481

Query: 373 ----GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G ++ A  +L  M D    PD  TYS L  GLC    V  A  L   +++      
Sbjct: 482 ACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPT 541

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             + N LI+ LCK+  +  A+++L +M+  G  PD++TY TL+ G+C+ G  E A ++  
Sbjct: 542 VVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLS 601

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
           +M      PN+V Y ++++GLCK   L  A  +    +  G   +  TY  LI G+   G
Sbjct: 602 DMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAG 661

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
           ++     +F EM   GI+ + V Y  L   LCK G   +A E+++
Sbjct: 662 QVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 706



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 206/432 (47%), Gaps = 17/432 (3%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP+   + +L+       + + A ++   +  +G   S   +N  +    K   +     
Sbjct: 355 TPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACD 414

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII---- 258
           L K+M+  G+V +V T+N V+  LCK  ++EEAL L+  M + G  PN    N II    
Sbjct: 415 LIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLC 474

Query: 259 -----NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
                ++ACQ G L+ A +L ++M   + D  +P+ VT++ +I+G C + RV+ A  +  
Sbjct: 475 QQSKIDQACQRGKLDEAFRLLKRM---TDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 531

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M+K      V T  TLI G  + G  +EA  + D MV  G  P+ V YN+ +H     G
Sbjct: 532 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 591

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
             E A  +LSDM+ + + P+  TY+ L  GLC+   + +A  +  Q+       + ++Y 
Sbjct: 592 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 651

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            LI   C +  +    +L   M+  G+ PD + YGTL    CK G    A+++    ++ 
Sbjct: 652 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 711

Query: 494 EKKP--NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITY-NTLINGYFINGKIA 550
            +       +Y   ++GL +   ++ A   ++   R G L A     +L+ G   +G+  
Sbjct: 712 LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGG 771

Query: 551 EAFAMFSEMRNV 562
           EA A+  E+ ++
Sbjct: 772 EARAVLEEIMDL 783



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 206/448 (45%), Gaps = 24/448 (5%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLK-SGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           F  VI   C   +  EA+ ++  M +    +P+V  +N++I+   +  + E   K+ +  
Sbjct: 13  FTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVKKMVQ-- 68

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
            VM      P+S T   I+ G CK G+++ AE +   M    I     T + L       
Sbjct: 69  -VMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLR 127

Query: 338 GSSEEALRLCDEMVKRGLMP--NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           GS E A +L +      +MP  N+  YN  +  L     V+ AL +   M +K I     
Sbjct: 128 GSMERAFQLLE------IMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAG 181

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +   +  GL  +G + +A +++ +   E  +    + N+L+   C    +  A++LL +M
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYRENRREPCL---VTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK------KVEKKPNLVIYNSIINGL 509
                 PD ++Y T++DG CK G +E AV+++ + +           P+L  YN +I GL
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 510 CKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C++  +D A  + +  ++R    D+ +Y  LI+G    GK+ +A  +F ++ + G+  + 
Sbjct: 299 CQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPST 358

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V Y  LI+ LC    +  AREL   M   G  P  VTY  ++    K    EE  +L   
Sbjct: 359 VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKK 418

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAED 656
           M+  G  PD  TYN ++  L      E+
Sbjct: 419 MIEDGHVPDVVTYNTVMDGLCKSSRVEE 446



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 9/250 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK T    + L+    + G  + A +V+  +   G S  +  +N  +    +  +  R  
Sbjct: 538 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAR 597

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L  +MV+ G   NV T+  ++  LCK  +L EA  ++ +M  SG  PN+  +  +I   
Sbjct: 598 ELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGF 657

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR----VEFAEEIRYAMIK 317
           C  G ++  LKLF +M V +G S  P+ V +  +    CK GR    +E   E R ++  
Sbjct: 658 CSAGQVDGGLKLFGEM-VCAGIS--PDHVVYGTLAAELCKSGRSARALEILREGRESLRS 714

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
                 V  +A  +DG    G  E AL    +MV+ G +P      S +  L   G    
Sbjct: 715 EAWGDEVYRFA--VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE 772

Query: 378 ALFVLSDMID 387
           A  VL +++D
Sbjct: 773 ARAVLEEIMD 782


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L  + + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 142/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M       +L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L  D+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSA-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 227/468 (48%), Gaps = 10/468 (2%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L+S  +C   P   DA++ A  Q    E + D  + + +KGHS S  ++NN L  L K  
Sbjct: 31  LNSESVC-GRPR--DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSG 87

Query: 196 EIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
            + R W  + E +  G  + +V +F + I A C+   + +   L  +M   G+ PNV  +
Sbjct: 88  NLDRTWGFFTEYL--GRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIY 145

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            ++I   C+ GD++ A  +F +M  +    +  N   +  +INGF K G  +   E+   
Sbjct: 146 TILIEACCRNGDIDQAKVMFSRMDDL---GLAANQYIYTIMINGFFKKGYKKDGFELYQK 202

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M   G+  N+ TY +LI  Y R G    A ++ DE+ KRG+  N V YN  I  L  +G 
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ 262

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V  A  +L  M   HI P   T+++L  GLC  G + +A     ++    +     +YNI
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNI 322

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+   K  N +   +L+  M  RG+ P  +TY  L++ + +  +IE A +++  MK++ 
Sbjct: 323 LISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIG 382

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P+   Y  +I+GLC   ++  A  L ++   + L  + + YNT+INGY       +A 
Sbjct: 383 LVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKAL 442

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
               EM   G+  N   Y   I  LCK G   +A+ L+K M   G+ P
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 209/428 (48%), Gaps = 5/428 (1%)

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           VI A  +   LE++L  +  M+  G  P+   FN  ++   + G+L+     F +    +
Sbjct: 44  VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT 103

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              V    +T    I  FC+ G V    E+   M   G+  NV  Y  LI+   R G  +
Sbjct: 104 QFDVYSFGIT----IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDID 159

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +A  +   M   GL  N  +Y   I+  F +G  +    +   M    + P+ +TY+ L 
Sbjct: 160 QAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLI 219

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
              CR+G +  AFK+ +++ +  +  +A +YNILI  LC+   ++ A+ LL  M    + 
Sbjct: 220 TEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHIN 279

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P   T+  L+DG C  G ++ A+   E +K +   P LV YN +I+G  K  +      L
Sbjct: 280 PTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSEL 339

Query: 522 LQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           ++  +  G+  + +TY  L+N +  +  I +A+ MF  M+ +G+  ++  Y +LI+ LC 
Sbjct: 340 VREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 399

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A +L K M+   + P+ V Y T++  + K C+  + ++  ++MV +GV+P+  +
Sbjct: 400 KGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 459

Query: 641 YNAIISPL 648
           Y + I  L
Sbjct: 460 YISTIQIL 467



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 5/365 (1%)

Query: 135 LLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LL   E    +P VF    L+ AC + G  + A  +  ++   G + + + +   ++   
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K       ++LY++M   G + N+ T+N +I   C++ KL  A  ++  + K G+  N V
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N++I   C+ G +  A  L  +   M    + P + T N +++G C  G+++ A    
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLER---MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYL 305

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             +   G+   + TY  LI G+++ G+S     L  EM  RG+ P+ V Y   ++     
Sbjct: 306 EKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS 365

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            D+E A  +   M    + PD  TY +L  GLC  G + +A KL+  ++E H+  +   Y
Sbjct: 366 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIY 425

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N +IN  CK  N   A + L  M+  G+ P++ +Y + I   CK G    A ++ + M +
Sbjct: 426 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTE 485

Query: 493 VEKKP 497
              KP
Sbjct: 486 AGLKP 490



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 2/316 (0%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           E++L     MV +G  P++  +N+ +  L   G+++      ++ + +    D +++ I 
Sbjct: 55  EQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSFGIT 113

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
            K  C NG V + F+L  Q+    +  + + Y ILI   C++ ++  AK + S M   GL
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGL 173

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-K 519
             +   Y  +I+G+ K G  +   ++Y+ MK V   PNL  YNS+I   C+D  L  A K
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
              + S+R    +A+TYN LI G    G++++A  +   M+   I      +N+L++ LC
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G   +A   ++ + L G+ P  VTY  L++ FSK  +   V EL  +M   G+SP   
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353

Query: 640 TYNAIISPLLGEKSAE 655
           TY  +++  +     E
Sbjct: 354 TYTILMNTFVRSDDIE 369


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 222/436 (50%), Gaps = 6/436 (1%)

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           + L+ EMV    + ++  F  ++ A     + E  +    +M   GI  ++  F ++I+ 
Sbjct: 56  FALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHC 115

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+   L FAL +  KM  +  +   P+ VT   +++GFC + R+  A  +   M+K+G 
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYE---PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
           + NV  Y TLIDG  + G    AL L +EM K+GL  + V YN+ +  L   G    A  
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +L DM+ + I PD  T++ L     + G + +A +L+ ++++  +  +  +YN +IN LC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
               L  AK+    M  +G  P+++TY TLI G+CK   ++  +++++ M       ++ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 501 IYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
            YN++I+G C+   L  A  +     S+R+   D IT+  L++G  +NG+I  A   F +
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRV-TPDIITHCILLHGLCVNGEIESALVKFDD 411

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           MR     +  V YNI+I+ LCK    ++A EL   + + G+ PD  TYT ++    KN  
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471

Query: 619 PEEVIELHDDMVLSGV 634
             E  EL   M   G+
Sbjct: 472 RREADELIRRMKEEGI 487



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 209/417 (50%), Gaps = 4/417 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  L+ A   +   E      QK+++ G S  ++++   +    + + +     +  +M+
Sbjct: 74  FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             GY  ++ TF  +++  C   ++ +A SL   M+KSG  PNVV +N +I+  C+ G+L 
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL+L  +M       +  + VT+N ++ G C  GR   A  +   M+K  I+ +V T+ 
Sbjct: 194 IALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LID + + G+ +EA  L  EM++  + PNNV YNS I+ L   G +  A      M  K
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P+  TY+ L  G C+   V +  KL  ++  E    D ++YN LI+  C+   L  A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             +   M+ R + PDIIT+  L+ G C  G IE A+  +++M++ EK   +V YN +I+G
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           LCK   ++ A  L       G+  DA TY  +I G   NG   EA  +   M+  GI
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 205/394 (52%), Gaps = 10/394 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   ++ +F ++I+  C+  +L  ALS+  +M+K G  P++V F  +++  C V  +  A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             L   M V SG    PN V +N +I+G CK G +  A E+   M K G+  +V TY TL
Sbjct: 161 FSLVILM-VKSGYE--PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           + G    G   +A R+  +M+KR + P+ V + + I     +G+++ A  +  +MI   +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            P++ TY+ +  GLC +G +  A K  + +  +    +  +YN LI+  CK   +    +
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           L   M   G   DI TY TLI GYC+ G +  A+ ++  M      P+++ +  +++GLC
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397

Query: 511 KDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            +  +++A      + ++ + IG+   + YN +I+G     K+ +A+ +F  +   G+  
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGI---VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +   Y I+I  LCK G  ++A EL++ M   GII
Sbjct: 455 DARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 207/459 (45%), Gaps = 53/459 (11%)

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
            R +  Y+E +  G++ ++              + E+A +L++ M+ S   P++V F  +
Sbjct: 32  ARAFSDYREKLRTGFLHSI--------------RFEDAFALFFEMVHSQPLPSIVDFTRL 77

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           +     +   E  +   +KM +     +  +  +   +I+ FC+  R+ FA  +   M+K
Sbjct: 78  LTATANLRRYETVIYFSQKMELYG---ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK 134

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G + ++ T+ +L+ G+       +A  L   MVK G  PN VVYN+             
Sbjct: 135 LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT------------- 181

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
                                 L  GLC+NG +  A +L N++ ++ +  D  +YN L+ 
Sbjct: 182 ----------------------LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC S   + A ++L  M+ R + PD++T+  LID + K GN++ A ++Y+ M +    P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279

Query: 498 NLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
           N V YNSIINGLC    L DA K+    + +    + +TYNTLI+G+     + E   +F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             M   G   +   YN LI+  C+ G  + A ++   M+   + PD +T+  L+     N
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
              E  +   DDM  S        YN +I  L      E
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 179/389 (46%), Gaps = 21/389 (5%)

Query: 91  SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL----------DSYE 140
           SH L S   ++H      R   AL ++G +M       +     LL          D++ 
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162

Query: 141 IC--------KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +         +    V++ L+    + G    A +++ +++ KG    +  +N  L+ L 
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                    ++ ++M+      +V TF  +I    K+  L+EA  LY  M++S + PN V
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N IIN  C  G L  A K F    +M+     PN VT+N +I+GFCK   V+   ++ 
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTF---DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M   G + ++ TY TLI GY + G    AL +   MV R + P+ + +   +H L   
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G++E AL    DM +         Y+I+  GLC+   V++A++L  ++  E +  DA +Y
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            I+I  LCK+     A +L+  M   G+I
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGII 488



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 99/220 (45%), Gaps = 10/220 (4%)

Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
           V +    + L + G L  A     L   +G       C      ++ L+    +    + 
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKG-------CFPNVVTYNTLISGFCKFRMVDE 334

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
              + Q++  +G +  I  +N  +    ++ ++     ++  MVS     ++ T  ++++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
            LC   ++E AL  +  M +S  +  +V +N++I+  C+   +E A +LF ++ V   + 
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV---EG 451

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           V P++ T+  +I G CK G    A+E+   M + GI C +
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 237/485 (48%), Gaps = 15/485 (3%)

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
           +D + +L    H+     + N +  L K   +     L  +M S G        N+VI  
Sbjct: 69  FDKMAELGAVNHTT----YYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGG 124

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LC+  +L  AL + YR +     P+ + +  +++   + G L  A+++ ++M  +S   V
Sbjct: 125 LCRAGRLRHALGV-YRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEM--VSARHV 181

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
            P++ T   ++   C   RV+ A E+   M+  G+  N  TY+ L+DG  +    +EA+ 
Sbjct: 182 -PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240

Query: 346 -LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  E+ +RG  P+ V Y++ I  L   G +  A+ +  +M      P   TY+ L  G 
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGY 297

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           CR G + +A +L  ++++++   D  +Y  L++  CK   L  A +L   M+   L PD+
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 357

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
           +T+ +L+DG C  G +E A+++ E + +    P +  YN +++G CK   +  A+ L+  
Sbjct: 358 VTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVAD 417

Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG--IAVNKVGYNILINFLCKF 581
            +  G + + +TYN L+ G    G+  +A     ++ + G     +   Y I+++ LC+ 
Sbjct: 418 FRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRD 477

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G    A +  + MI  G +P   T+ T+V    K   P++  EL ++M+  G +P   T 
Sbjct: 478 GRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTC 537

Query: 642 NAIIS 646
           +A++S
Sbjct: 538 DAVVS 542



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 210/443 (47%), Gaps = 11/443 (2%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFNMIINEACQVG 265
           M+  GY  + +TF +V+  L    KL     L    ++  G+ P+ V  N I+ E C   
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           D   A+ LF KM  +       N  T+  +I+  CK   ++ A  +   M   G++    
Sbjct: 61  DTTTAMALFDKMAELGA----VNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTL 116

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
            +  +I G  R G    AL +  +M      P+ + Y   +H L   G +  A+ VL +M
Sbjct: 117 LHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEM 175

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +     PD+ T +++ + LC    V  A +L  ++L   M  +A +Y+ L++ LCK   L
Sbjct: 176 VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 235

Query: 446 -AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
             A   LL  +  RG  PDI+TY T+IDG CK G +  AV ++E M      P  + YNS
Sbjct: 236 DEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNS 292

Query: 505 IINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I G C+   +D A  LL +        D ITY TL++ +   G++ +A+ +F +M    
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           ++ + V +  L++ LC  G  + A EL++ +   G  P   TY  +V  + K+    +  
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412

Query: 624 ELHDDMVLSGVSPDNQTYNAIIS 646
           EL  D    G  P+  TYN +++
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVA 435



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 237/534 (44%), Gaps = 74/534 (13%)

Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
           ++ +++ +G S      N  L+ L    +      L+ +M   G V +   +NL I+ LC
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNL-IHPLC 91

Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG--------- 278
           K   L+EA+ L   M   G+ P  +  N++I   C+ G L  AL ++R+M          
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLT 151

Query: 279 ---VMSG--------DSV-----------LPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
              ++ G        D+V           +P++ T   ++   C   RV+ A E+   M+
Sbjct: 152 YTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML 211

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLC-DEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
             G+  N  TY+ L+DG  +    +EA+ L   E+ +RG  P+ V Y++ I  L   G +
Sbjct: 212 HRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 271

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A+ +  +M      P   TY+ L  G CR G + +A +L  ++++++   D  +Y  L
Sbjct: 272 RDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTL 328

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           ++  CK   L  A +L   M+   L PD++T+ +L+DG C  G +E A+++ E + +   
Sbjct: 329 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 388

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING------------ 542
            P +  YN +++G CK   +  A+ L+   +  G + + +TYN L+ G            
Sbjct: 389 PPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448

Query: 543 ------------------YFI-------NGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
                             Y I       +G+  +A   + EM   G       +  ++  
Sbjct: 449 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 508

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           LCK    QQA EL++ MI +G  P   T   +V+ + +    ++  EL  ++ L
Sbjct: 509 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 250/541 (46%), Gaps = 32/541 (5%)

Query: 63  VNRVVSEF--RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
           +N +++E    +    A+  +  + E    +H+   +  ++H L   R  D+A+ L+ + 
Sbjct: 49  LNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN--LIHPLCKARLLDEAMGLLLD- 105

Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
           M +  ++P   L  +            V   L RA    G    A  V +++    H   
Sbjct: 106 MKSRGMNPGTLLHNV------------VIGGLCRA----GRLRHALGVYRQMN-DAHPPD 148

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
              +   +  L K   +    ++ +EMVS  +V +  T  +V+ +LC   ++++A  L  
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 208

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            ML  G+  N + ++ +++  C+   L+ A+ L   +G ++     P+ VT++ +I+G C
Sbjct: 209 EMLHRGMAANAITYSALVDGLCKCERLDEAVALL--LGEVTRRGFTPDIVTYSTVIDGLC 266

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K GR+  A +I   M  A       TY +LI GY R G  +EA+RL  +MV     P+ +
Sbjct: 267 KAGRLRDAVDIFEEMSCAP---TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            Y + +      G ++ A  +   M+   + PD  T++ L  GLC  G ++ A +L  ++
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
                    Y+YN +++  CKSN +  A++L++    RG +P+ +TY  L+ G C+ G  
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 481 EGAVQVYENMKKVEKKP---NLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITY 536
           + A+Q  + +   E  P   ++ +Y  I++ LC+D   D A    +   QR  +  A T+
Sbjct: 444 DQALQYLDQLNS-EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            T++       +  +A  +  EM   G        + +++  C+ G  Q+A EL   + L
Sbjct: 503 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562

Query: 597 H 597
           +
Sbjct: 563 Y 563



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 165/316 (52%), Gaps = 7/316 (2%)

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A+ L D+M + G + N+  Y + IH L     ++ A+ +L DM  + + P    ++++  
Sbjct: 65  AMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIG 123

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           GLCR G ++ A  ++ Q+ + H   D  +Y  L++ L K+  L  A Q+L  M+    +P
Sbjct: 124 GLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP 182

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D  T   ++   C G  ++ A ++ E M       N + Y+++++GLCK   LD A +LL
Sbjct: 183 DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALL 242

Query: 523 --QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
             + ++R    D +TY+T+I+G    G++ +A  +F EM     A   + YN LI   C+
Sbjct: 243 LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCR 299

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A  L+  M+     PD +TYTTL++ F K    ++  EL   MV + +SPD  T
Sbjct: 300 AGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 359

Query: 641 YNAIISPLLGEKSAED 656
           + +++  L GE   ED
Sbjct: 360 FTSLVDGLCGEGRMED 375



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 5/277 (1%)

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH-NQVLEEHMVGDAYSYNILINYLCKSN 443
           M+D     D  T++++ +GL  +  ++    L  +++ +  +  D    N ++  LC + 
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           +   A  L   M   G + +  TY  LI   CK   ++ A+ +  +MK     P  +++N
Sbjct: 61  DTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            +I GLC+   L  A  + +        D +TY  L++G    G++ +A  +  EM +  
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS--PEE 621
              +     +++  LC       AREL++ M+  G+  + +TY+ LV    K C    E 
Sbjct: 180 HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK-CERLDEA 238

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           V  L  ++   G +PD  TY+ +I  L       D V
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 242/493 (49%), Gaps = 6/493 (1%)

Query: 145 TPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           TP  F  + ++ +  +      A  + Q++++ G       +N  ++   +L      + 
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           ++ +++  GY     TFN +I  LC +  + +AL  + +++  G   + V +  +IN  C
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           +VG +  AL+L ++   + G  V PN+V +N II+  CK   V  A ++   M+   I  
Sbjct: 178 KVGRITAALQLLKR---VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY  LI G++       A+ L ++M K  + PN   +N  +     EG V  A  VL
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           + M+   I PD  TY+ L  G C    V +A  + + +    ++ +   Y  ++N  CK 
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKI 354

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  L   M  R +IP+++TY +LIDG CK G I  A+++ + M    + PN+V Y
Sbjct: 355 KMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTY 414

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           +SI++ LCK+  +D A +LL   +  G+  D  TY  LI G   +G++ +A  +F ++  
Sbjct: 415 SSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV 474

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G  ++   Y ++I   C  G + +A  L+  M  +G IP+  TY  ++    +    + 
Sbjct: 475 KGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDT 534

Query: 622 VIELHDDMVLSGV 634
             +L  +M++ G+
Sbjct: 535 AEKLLREMIVRGL 547



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 218/429 (50%), Gaps = 4/429 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           FN ++ +L K      ALSL+ +M  +GI  +   FN++IN   Q+G    +  +F K+ 
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKI- 122

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                   P ++T N +I G C  G +  A      ++  G   +  +Y TLI+G  + G
Sbjct: 123 --LKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVG 180

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
               AL+L   +  + + PN V+YN  I  +     V  A  + S M+ K ICPD FTY+
Sbjct: 181 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYN 240

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  G      +  A  L N++ +E++  + Y++NIL++  CK   +  AK +L+ M+  
Sbjct: 241 ALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
            + PD++TY +L+DGYC    +  A  ++++M       N+ IY +++NG CK   +D A
Sbjct: 301 DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360

Query: 519 KSLLQASQ-RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            +L +  + R  + + +TY++LI+G    G+I  A  +  EM + G   N V Y+ +++ 
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDA 420

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           LCK     +A  L+  +   GI PD  TYT L+    ++   E+   + +D+++ G + D
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLD 480

Query: 638 NQTYNAIIS 646
              Y  +I 
Sbjct: 481 VYAYTVMIQ 489



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 237/474 (50%), Gaps = 5/474 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  LS LVK         L+++M   G   +  TFN++I    +      + S++ ++L
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           K G  P  + FN +I   C  G +  AL    K+ V  G  +  + V++  +ING CK+G
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKV-VAQGFHL--DQVSYGTLINGLCKVG 180

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R+  A ++   +    +  N   Y  +ID   +     +A  L  +MV + + P+   YN
Sbjct: 181 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYN 240

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I    A   +  A+ + + M  ++I P+ +T++IL  G C+ G V  A  +   ++++
Sbjct: 241 ALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D  +YN L++  C  N +  AK +  SM   G+I ++  Y T+++G+CK   ++ A
Sbjct: 301 DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLING 542
           + ++E M+  +  PN+V Y+S+I+GLCK   +  A  L+ +   R    + +TY+++++ 
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDA 420

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
              N  + +A A+ + +++ GI  +   Y ILI  LC+ G  + A+ + + +++ G   D
Sbjct: 421 LCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLD 480

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              YT ++  F      ++ + L   M  +G  P+ +TY  +I  L  EK   D
Sbjct: 481 VYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLF-EKDEND 533



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 224/454 (49%), Gaps = 4/454 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+   +Q+G    ++ +  K+  KG+  +   +N  +  L     I +    + ++
Sbjct: 98  TFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKV 157

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V+ G+  +  ++  +I  LCK  ++  AL L  R+    + PN V +NMII+  C+   +
Sbjct: 158 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 217

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  L+ +   M    + P+  T+N +I+GF  + ++ +A ++   M K  I+ NV T+
Sbjct: 218 NDAFDLYSQ---MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTF 274

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L+DG+ + G   +A  +   M+K  + P+ V YNS +    +   V  A  +   M  
Sbjct: 275 NILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             +  +   Y+ +  G C+   V +A  L  ++    ++ +  +Y+ LI+ LCK   +  
Sbjct: 335 GGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFY 394

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L+  M  RG  P+I+TY +++D  CK  +++ A+ +  N+K    +P++  Y  +I 
Sbjct: 395 ALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIK 454

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLC+   L+ A+++ +     G  LD   Y  +I G+   G   +A A+ S+M + G   
Sbjct: 455 GLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIP 514

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           N   Y ++I  L +      A +L++ MI+ G++
Sbjct: 515 NAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 206/421 (48%), Gaps = 4/421 (0%)

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           S  + +L     P    FN I++   +      AL L ++M +   + +  +  T N +I
Sbjct: 47  SFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMEL---NGIESDFFTFNILI 103

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           N F +LG    +  I   ++K G      T+ TLI G    G   +AL   D++V +G  
Sbjct: 104 NCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFH 163

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
            + V Y + I+ L   G +  AL +L  +  K + P+   Y+++   +C+   V  AF L
Sbjct: 164 LDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDL 223

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
           ++Q++ + +  D ++YN LI+     + L  A  L + M    + P++ T+  L+DG+CK
Sbjct: 224 YSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCK 283

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT- 535
            G +  A  V   M K + KP++V YNS+++G C    ++ AK +  +    G++  +  
Sbjct: 284 EGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQI 343

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y T++NG+     + EA  +F EMR   I  N V Y+ LI+ LCK G    A +L+  M 
Sbjct: 344 YTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMH 403

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             G  P+ VTY++++    KN   ++ I L  ++   G+ PD  TY  +I  L      E
Sbjct: 404 DRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE 463

Query: 656 D 656
           D
Sbjct: 464 D 464



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 3/213 (1%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A   ++  +V    +I   + A ++ ++++ +    ++  +++ +  L KL  I    KL
Sbjct: 339 ANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKL 398

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             EM   G   N+ T++ ++ ALCK   +++A++L   +   GI P++  + ++I   CQ
Sbjct: 399 VDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQ 458

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G LE A  +F  + ++ G ++  +   +  +I GFC  G  + A  +   M   G   N
Sbjct: 459 SGRLEDAQNVFEDL-LVKGYNL--DVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPN 515

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            +TY  +I        ++ A +L  EM+ RGL+
Sbjct: 516 AKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHNLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +   M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 148/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K  +  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++  +L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A +  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 152/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++  M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSL--LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  +  L  SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKLMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVY-------------------ENMKKVEK----------------KP 497
            Y + G +  A++ Y                   E++ K++                   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++   K+  +  A+S+  A  +  L  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 218/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C+++H L   +   +A  L+  ++S     S       +L++     + 
Sbjct: 6   NSTFRHTLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G    A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ A +   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 151/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A++  + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G + 
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVV 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  A      M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 153/294 (52%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 134/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E  +E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +  A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VVLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 251/511 (49%), Gaps = 7/511 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++A+V    + G  E A  +   + V  ++   + +   +  L     I     +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNA---YTYFPVVRALCARGRIADALAVLDEMP 149

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G       +++++ A C+      A+ +   +   G   +V   N+++N  C  G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL L R +     +   P+ V++N ++ G C   R    +E+   M++     N+ T+ 
Sbjct: 210 EALHLLRDLPSFGCE---PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 266

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI    R G  E    +  +MV+ G  P+  +Y + I  +  EG +E A  +L+ M   
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 326

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+   Y+ L KGLC     ++  +L  ++ ++    D  ++NIL+++ C++  +   
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +LL  M+ RG +PD+ITY T+I+G+CK G I+ AV + ++M     KPN + Y  ++ G
Sbjct: 387 IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 509 LCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC  +  +DA   + Q  Q+   L+ IT+NTLIN     G + +A  +  +M   G + +
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ +I+ L K G   +A EL+ VM+  G+ P+ + Y+++ +  S+     +VI++ D
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           ++  + +  D   YNA+IS L      E  +
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAI 597



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 232/493 (47%), Gaps = 4/493 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C   P ++  ++ A  + G    A  V++ L  +G ++ +   N  L+ +     +    
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 212

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L +++ S G   +V ++N V+  LC   +      L   M++    PN+V FN +I+  
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G  E   ++   +  M      P+   +  II+G CK G +E A EI   M   G+ 
Sbjct: 273 CRNGLFE---RVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV  Y TL+ G       EE   L  EM  +    ++V +N  + +    G V+  + +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+++   PD  TY+ +  G C+ G + +A  L   +       +  SY I++  LC 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +     A+ L+S MI +G   + IT+ TLI+  CK G +E A+++ + M      P+L+ 
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+++I+GL K    D A  LL      G+  + I Y+++ +     G+I +   MF  ++
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 569

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           +  I  + V YN +I+ LCK G  ++A E +  M+  G +P+  TYT L+   +     +
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 629

Query: 621 EVIELHDDMVLSG 633
           E  E+  ++   G
Sbjct: 630 EAQEMLTELCSKG 642



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 38/289 (13%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ LV    Q G  +   ++++++  +G    +  +   ++   K   I    
Sbjct: 363 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAV 422

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L K M +CG   N  ++ +V+  LC   +  +A  L  +M++ G   N + FN +IN  
Sbjct: 423 MLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFL 482

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A++L ++M V   +   P+ ++++ +I+G  K G+ + A E+   M+  G+ 
Sbjct: 483 CKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMS 539

Query: 322 CNVRTYATLIDGYARGG-----------------------------------SSEEALRL 346
            N   Y+++    +R G                                    +E A+  
Sbjct: 540 PNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEF 599

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
              MV  G +PN   Y   I  L +EG V+ A  +L+++  K     H 
Sbjct: 600 LAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 648


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 215/415 (51%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  YK
Sbjct: 66  IYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE ++  A  ++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            L+     FR    M      P+  T++ +ING CK  +++ A E+   M++ G+  N  
Sbjct: 186 ILDEG---FRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +++ +GL P+ + YN+ I+    +GD++    ++ +M
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   +++EE++  D   Y  LI+ LCK    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +++ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVV 417



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 152/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+   Y+  I+ L  E  ++ A  +  +M++K + P+  T++ L  G C+NG +  
Sbjct: 200 SGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI   CK  +L   + L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M +   + + V+Y ++I+GLCK+     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D+ TY  ++N +  NG +     +  EM+  G
Sbjct: 380 DSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDG 411



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 149/289 (51%), Gaps = 1/289 (0%)

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           E+++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  + G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMG 185

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + + F+L N +       D Y+Y++LIN LCK + +  A +L   M+ +GL+P+ +T+ 
Sbjct: 186 ILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFT 245

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLIDG+CK G ++ A+++Y+ +      P+L+ YN++I G CK   L   + L+      
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMK 305

Query: 529 GLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           GL  D ITY TLI+G    G +  AF    +M    I ++ V Y  LI+ LCK G    A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDA 365

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
            ++++ M+  G+ PD  TYT ++  F KN       +L  +M   G  P
Sbjct: 366 EKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVP 414



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G ++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NGK+  A  ++ ++ + G++ + + YN LI   CK G  +Q R+
Sbjct: 238 VPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 KEGRSVD 364



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C+ G ++ A  + + + +  +     S+N L+N   K   L    +L ++
Sbjct: 137 YFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G  PD+ TY  LI+G CK   ++ A ++++ M +    PN V + ++I+G CK+  
Sbjct: 197 MHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGK 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD A  + +     GL  D ITYNTLI G+   G + +   +  EM   G+  +K+ Y  
Sbjct: 257 LDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A E  K MI   I  D V YT L++   K     +  ++  +M+  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIIS 646
           + PD+ TY  +++
Sbjct: 377 LKPDSGTYTIVMN 389


>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g38730-like [Brachypodium distachyon]
          Length = 599

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 206/411 (50%), Gaps = 4/411 (0%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A  V  +++ +G +   HA    L+ L +        K++ EM   G   N + +N +++
Sbjct: 130 AARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLH 189

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
              K      A  L  RM  +G+  +   FN +I    + G +++     R+   M  + 
Sbjct: 190 VCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKG-MQYEAMCVRER--MQDEG 246

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V P+ VT N +I+G CK GR++ A ++R  MI A ++ +  TY TL+DGY R G   EA+
Sbjct: 247 VEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAV 306

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L +EM   G++P    YN+ I  L  +G ++    +LS+M  + +  DH T + L    
Sbjct: 307 KLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSY 366

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G +  A K+  +++E  +  D ++Y  LI+  CK+  L  AK+ L  M+ RG  P+ 
Sbjct: 367 AKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNY 426

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
             +  L+DG+CK  N +  + + + + K    P+  +Y S+I  LCK   +D A+ +L  
Sbjct: 427 SVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQ 486

Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
            Q  GL +D + Y TL   +   GK+A A  + +EM    ++V    YN L
Sbjct: 487 MQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEMARKQMSVTPQIYNCL 537



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 168/347 (48%), Gaps = 1/347 (0%)

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
            R   A  +   M   G+  +      L+   AR   +  A ++ +EM + G+  N  VY
Sbjct: 125 ARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVY 184

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ +H      D   A  +++ M    +  D F+++ +     R G   +A  +  ++ +
Sbjct: 185 NAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQD 244

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
           E +  D  ++N +I+ LCK   +  A QL + MI   + PD +TY TL+DGYC+ G++  
Sbjct: 245 EGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGE 304

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLIN 541
           AV++ E M+     P +  YN+II  LC+D  +     LL +   R    D +T NTLIN
Sbjct: 305 AVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLIN 364

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
            Y   G +  A  +   M   G+ +++  Y  LI+  CK     +A+E +  M+  G  P
Sbjct: 365 SYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSP 424

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +Y  ++ LV  F K  + + V+ + D+++  G+ PD   Y ++I  L
Sbjct: 425 NYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRL 471



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 201/440 (45%), Gaps = 4/440 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V ++ L+  +     +  +A  ++ +M   G+ P+      ++    +      A K+F
Sbjct: 110 HVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVF 169

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +MG      V  N+  +N +++   K      AE +   M  AG+  +  ++ T+I  Y
Sbjct: 170 NEMGRAG---VAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALY 226

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            R G   EA+ + + M   G+ P+ V +N+ IH L  EG ++ A  + +DMI   + PD 
Sbjct: 227 VRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDT 286

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+ L  G CR G V +A KL  ++    MV    +YN +I  LC+   +     LLS 
Sbjct: 287 VTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSE 346

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  R +  D +T  TLI+ Y K G++  A +V + M +   + +   Y ++I+G CK   
Sbjct: 347 MDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKE 406

Query: 515 LDAAK-SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LD AK +L +   R    +   ++ L++G+           +  E+   G+  +K  Y  
Sbjct: 407 LDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRS 466

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI  LCK G    A++++  M   G+  D + Y TL              ++ ++M    
Sbjct: 467 LIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEMARKQ 526

Query: 634 VSPDNQTYNAIISPLLGEKS 653
           +S   Q YN + +    EK+
Sbjct: 527 MSVTPQIYNCLCTSYGDEKA 546



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 32/340 (9%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V++A++  C +      A  ++ ++   G  +   ++N  ++  V+         + + M
Sbjct: 183 VYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERM 242

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   ++ T+N VI+ LCKE +++EA  L   M+ + + P+ V +  +++  C++GD+
Sbjct: 243 QDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDV 302

Query: 268 EFALKLFRKM-------GV-------------------------MSGDSVLPNSVTHNCI 295
             A+KL  +M       GV                         M G  V  + VT N +
Sbjct: 303 GEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTL 362

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           IN + K G +  A +++  M+++G+  +  TY  LI G+ +    +EA     EM+ RG 
Sbjct: 363 INSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGF 422

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN  V++  +     + + +  L +  ++I + + PD   Y  L + LC+ G V  A K
Sbjct: 423 SPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQK 482

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           + +Q+  + +  D   Y  L      +  +AAA  +L+ M
Sbjct: 483 VLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEM 522


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 234/462 (50%), Gaps = 5/462 (1%)

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCF 254
           + G  ++++  M     V     F LV  A  K    E+A+ L+ RM+        V  F
Sbjct: 79  DFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSF 138

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   Q G    AL+ F + GV    ++ PN ++ N +I   CKLG V+ A E+   
Sbjct: 139 NSVLNVIIQEGLFHRALE-FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 197

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M     + +V TY TL+DG  +    +EA+ L DEM   G  P++V +N  I+ L  +GD
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +     ++ +M  K   P+  TY+ +  GLC  G + +A  L ++++    V +  +Y  
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN L K         LLSS+  RG   +   Y TLI G  K    E A+ +++ M +  
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
            +PN+V+Y+++I+GLC++  LD AK +L      G   +A TY++LI G+F  G   +A 
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            ++ EM       N++ Y++LI+ LC+ G  ++A  +   M+  G+ PD V Y++++   
Sbjct: 438 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 497

Query: 614 SKNCSPEEVIELHDDMVL--SGVSPDNQTYNAIISPLLGEKS 653
               S E  ++L ++M+   S   PD  TYN ++  L  + S
Sbjct: 498 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 539



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 207/397 (52%), Gaps = 6/397 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ +++A  ++G  + A +V +++ ++     +  +   +  L K + I     L  EM 
Sbjct: 175 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQ 234

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +  TFN++I  LCK+  +     L   M   G  PN V +N IIN  C  G L+
Sbjct: 235 IEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLD 294

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ L  +   M     +PN VT+  +ING  K GR      +  ++ + G   N   Y+
Sbjct: 295 KAVSLLDR---MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 351

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI G  +   SEEA+ L  +MV++G  PN VVY++ I  L  EG ++ A  +L +M++K
Sbjct: 352 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 411

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P+ FTYS L KG  + G  ++A ++  ++ + + V +   Y++LI+ LC+   L  A
Sbjct: 412 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 471

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVIYNSII 506
             + + M+ RGL PD++ Y ++I G C  G++E  ++++  M  ++ + +P++V YN ++
Sbjct: 472 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 531

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
             LCK  S+  A  LL +    G   D IT N  +N 
Sbjct: 532 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 568



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 242/506 (47%), Gaps = 37/506 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY------VENVNTFNLVIYALCKECKLE 233
           ++ ++N+ L+ +++     R  + Y+    CG         NV +FNLVI A+CK   ++
Sbjct: 134 TVRSFNSVLNVIIQEGLFHRALEFYE----CGVGGKTNISPNVLSFNLVIKAMCKLGLVD 189

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            A+ ++  M      P+V  +  +++  C+   ++ A+ L  +M +   +   P+SVT N
Sbjct: 190 RAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI---EGCFPSSVTFN 246

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +ING CK G +    ++   M   G   N  TY T+I+G    G  ++A+ L D MV  
Sbjct: 247 VLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVAS 306

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
             +PN+V Y + I+ L  +G     + +LS + ++    + + YS L  GL +    ++A
Sbjct: 307 KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEA 366

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L  +++E+    +   Y+ LI+ LC+   L  AK++L  M+ +G  P+  TY +LI G
Sbjct: 367 MGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKG 426

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           + K GN + A++V++ M K    PN + Y+ +I+GLC+D  L  A  +       GL  D
Sbjct: 427 FFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPD 486

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEM--RNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + Y+++I+G    G +     +F+EM  +      + V YNIL+  LCK      A +L
Sbjct: 487 VVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDL 546

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSP---------EEVIELHDDMVLSGVS------ 635
           +  M+  G  PD +T    +    +  +P         E V+ LH    + G +      
Sbjct: 547 LNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVM 606

Query: 636 ------PDNQTYNAIISPLLGEKSAE 655
                 P+  T+  II  L   K  +
Sbjct: 607 LQKFLPPNASTWERIIPELCKPKKVQ 632



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 205/437 (46%), Gaps = 63/437 (14%)

Query: 141 ICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           I K  P VF    L+    +    + A  ++ +++++G   S   +N  ++ L K  ++ 
Sbjct: 200 IQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMV 259

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           R  KL   M   G V N  T+N +I  LC + KL++A+SL  RM+ S   PN V +  +I
Sbjct: 260 RVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLI 319

Query: 259 NEACQVG-----------------------------------DLEFALKLFRKMGVMSGD 283
           N   + G                                     E A+ L++KM V  G 
Sbjct: 320 NGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKM-VEKG- 377

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
              PN V ++ +I+G C+ G+++ A+EI   M+  G   N  TY++LI G+ + G+S++A
Sbjct: 378 -CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           +R+  EM K   +PN + Y+  IH L  +G +  A+ + + M+ + + PD   YS +  G
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496

Query: 404 LCRNGCVKQAFKLHNQVL--EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           LC  G V+   KL N++L  E     D  +YNIL+  LCK N+++ A  LL+SM+ RG  
Sbjct: 497 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 556

Query: 462 PDIITYGTLI-----------DG----------YCKGGNIEGAVQVYENMKKVEKKPNLV 500
           PD+IT    +           DG            K   I GA ++ E M +    PN  
Sbjct: 557 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 616

Query: 501 IYNSIINGLCKDASLDA 517
            +  II  LCK   + A
Sbjct: 617 TWERIIPELCKPKKVQA 633



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 168/354 (47%), Gaps = 21/354 (5%)

Query: 135 LLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD     K  P    +  L+    + G +     ++  L+ +GH  + +A++  +S L 
Sbjct: 299 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLF 358

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  +      L+K+MV  G   N+  ++ +I  LC+E KL+EA  +   M+  G  PN  
Sbjct: 359 KEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAF 418

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            ++ +I    + G+ + A++++++   M+ ++ +PN + ++ +I+G C+ G++  A  + 
Sbjct: 419 TYSSLIKGFFKTGNSQKAIRVWKE---MAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 475

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV--KRGLMPNNVVYNSTIHWLF 370
             M+  G+  +V  Y+++I G    GS E  L+L +EM+  +    P+ V YN  +  L 
Sbjct: 476 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALC 535

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            +  +  A+ +L+ M+D+   PD  T +I    L              + L     G  +
Sbjct: 536 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL-------------REKLNPPQDGREF 582

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
             + L+  L K   +  A +++  M+ + L P+  T+  +I   CK   ++  +
Sbjct: 583 -LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAII 635



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 10/338 (2%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVK--RGLMPNNVVYNSTIHWLFAEGDV-EGALFVL 382
           T+ +LI+ YA  G      ++ D M +  R  +  N +    +   + +  + E A+ + 
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFIL---VFRAYGKAHLPEKAIELF 122

Query: 383 SDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVL--EEHMVGDAYSYNILINYL 439
             M+D+  C     +++ +   + + G   +A + +   +  + ++  +  S+N++I  +
Sbjct: 123 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 182

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   +  A ++   M ++   PD+ TY TL+DG CK   I+ AV + + M+     P+ 
Sbjct: 183 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 242

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V +N +INGLCK   +     L+      G + + +TYNT+ING  + GK+ +A ++   
Sbjct: 243 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 302

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M       N V Y  LIN L K G       L+  +   G   +   Y+TL++   K   
Sbjct: 303 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 362

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            EE + L   MV  G  P+   Y+A+I  L  E   ++
Sbjct: 363 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDE 400



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++ ++++   + G    A++ YE     K    PN++ +N +I  +CK   +D A  + +
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 524 --ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
             A Q+    D  TY TL++G     +I EA  +  EM+  G   + V +N+LIN LCK 
Sbjct: 197 EMAIQKCEP-DVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKK 255

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +  +L+  M L G +P+ VTY T++         ++ + L D MV S   P++ TY
Sbjct: 256 GDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTY 315

Query: 642 NAIISPLLGEKSAEDQV 658
             +I+ L+ +  + D V
Sbjct: 316 GTLINGLVKQGRSVDGV 332


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 247/514 (48%), Gaps = 31/514 (6%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     F  LVR   + G T    +++ +++  G S +   +N  +S   K  +     
Sbjct: 87  CEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAE 146

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI----WPNVVCFNMI 257
           KL  EM   G   +V TFN  I ALC   K+ EA  ++  M    +     PN++ +N++
Sbjct: 147 KLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLM 206

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           +   C+ G LE A  LF KM V      L N  ++N  + G  ++G++  A+ +   M+ 
Sbjct: 207 LGGFCKEGMLEEARALFEKMKVSEN---LMNRESYNIWLLGLVRIGKLLEAQLVLKEMVD 263

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G++ NV +Y  ++DG  + G   +A  L   M   G++P+ V Y + +H     G V  
Sbjct: 264 MGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSE 323

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  VL +M+     P+++T +IL   L + G + +A +L  ++ E+  V D  + NI+I+
Sbjct: 324 ANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVID 383

Query: 438 YLCKSNNLAAAKQLLSSMIVRG-----------------------LIPDIITYGTLIDGY 474
            LC +  L  A ++++ M   G                        +PD+I+Y T+I G 
Sbjct: 384 GLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGL 443

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI 534
           CK G +  A + +  M     +P+  IY+  I+  CK+  + +A  +L+  ++ G    +
Sbjct: 444 CKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTL 503

Query: 535 -TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
            TYN+LI G     +I E + +  EMR  G++ +   YN +++ LC+ G  + A  ++  
Sbjct: 504 QTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDE 563

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
           M+  GI P+  +++ L+  F K C    V E+ +
Sbjct: 564 MLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 233/505 (46%), Gaps = 18/505 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ L+      G  + A ++  K+  KG   + +++   +    +     +  +L  EM
Sbjct: 58  TFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEM 117

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G+  N   +N +I + CKE K ++A  L   M K G+ P+VV FN  I+  C  G +
Sbjct: 118 RRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKV 177

Query: 268 EFALKLFRKMGVMSGDSVL----PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
             A ++FR M +   D VL    PN +T+N ++ GFCK G +E A  +   M  +    N
Sbjct: 178 LEASRIFRDMQI---DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMN 234

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             +Y   + G  R G   EA  +  EMV  G+ PN   YN  +  L   G +  A  ++ 
Sbjct: 235 RESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR 294

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M    + PD  TY+ L  G C  G V +A  +  +++ +    + Y+ NIL+  L K  
Sbjct: 295 LMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEG 354

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            ++ A++LL  M  +G + D +T   +IDG C  G ++ A+++   M          + N
Sbjct: 355 RISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGN 414

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           S I GL  D+           S++  + D I+Y+T+I+G    G++ EA   F EM    
Sbjct: 415 SYI-GLVDDSD----------SRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKN 463

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  +   Y++ I+  CK G    A  ++K M   G      TY +L+          E+ 
Sbjct: 464 LQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIY 523

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            L D+M   GVSPD   YN ++S L
Sbjct: 524 GLIDEMRERGVSPDVSIYNNVLSSL 548



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 226/497 (45%), Gaps = 31/497 (6%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           SI+ +N  L    K   +     L K+MV+ G      TFN++I  LC    L++A  L+
Sbjct: 20  SIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELF 79

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
            +M + G  PN   F +++   C+ G   F  K    +G M      PN V +N +I+ F
Sbjct: 80  DKMPEKGCEPNEYSFGILVRGYCRAG---FTSKGLELLGEMRRLGFSPNKVVYNTLISSF 136

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM--- 356
           CK G+ + AE++   M K G+  +V T+   I      G   EA R+  +M    ++   
Sbjct: 137 CKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLP 196

Query: 357 -PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
            PN + YN  +     EG +E A  +   M       +  +Y+I   GL R G + +A  
Sbjct: 197 QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 256

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +  ++++  M  + YSYNI+++ LCK+  L  A+ L+  M   G++PD +TY TL+ GYC
Sbjct: 257 VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 316

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAI 534
             G +  A  V   M +    PN    N ++  L K+  +  A+ LLQ     G ++D +
Sbjct: 317 HTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 376

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV-----------------------NKVGY 571
           T N +I+G   NGK+ +A  + + M   G A                        + + Y
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISY 436

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
           + +I+ LCK G   +A++    M+   + PD   Y   +  F K         +  DM  
Sbjct: 437 STIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEK 496

Query: 632 SGVSPDNQTYNAIISPL 648
            G +   QTYN++I  L
Sbjct: 497 KGCNKTLQTYNSLIMGL 513



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+    + G  +    LC +MV  G+ P    +N  I  L   G ++ A  +   M 
Sbjct: 24  YNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMP 83

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K   P+ +++ IL +G CR G   +  +L  ++       +   YN LI+  CK     
Sbjct: 84  EKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTD 143

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE----KKPNLVIY 502
            A++L+  M   GL PD++T+   I   C  G +  A +++ +M+  E     +PN++ Y
Sbjct: 144 DAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITY 203

Query: 503 NSIINGLCKDASLDAAKSLLQASQ-RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N ++ G CK+  L+ A++L +  +    L++  +YN  + G    GK+ EA  +  EM +
Sbjct: 204 NLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVD 263

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           +G+  N   YNI+++ LCK G    AR LM++M   G++PD VTYTTL+  +       E
Sbjct: 264 MGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSE 323

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
              +  +M+  G SP+N T N ++  L  E
Sbjct: 324 ANNVLREMMRDGCSPNNYTCNILLYSLWKE 353



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 193/390 (49%), Gaps = 8/390 (2%)

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           P++  +N+++    + G ++    L + M V SG  V P + T N +I   C  G ++ A
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDM-VASG--VSPETYTFNVLIGLLCDSGCLDDA 75

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            E+   M + G + N  ++  L+ GY R G + + L L  EM + G  PN VVYN+ I  
Sbjct: 76  RELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISS 135

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG- 427
              EG  + A  ++ +M    + PD  T++     LC +G V +A ++   +  + ++G 
Sbjct: 136 FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 195

Query: 428 ---DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
              +  +YN+++   CK   L  A+ L   M V   + +  +Y   + G  + G +  A 
Sbjct: 196 PQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQ 255

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
            V + M  +  +PN+  YN +++GLCK+  L  A+ L++     G+L D +TY TL++GY
Sbjct: 256 LVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGY 315

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              GK++EA  +  EM   G + N    NIL+  L K G   +A EL++ M   G + D 
Sbjct: 316 CHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDT 375

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           VT   ++     N   ++ IE+ + M   G
Sbjct: 376 VTCNIVIDGLCNNGKLDKAIEIVNGMWTHG 405



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 214/494 (43%), Gaps = 26/494 (5%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  E A  + +K+KV  + ++  ++N +L  LV++ ++     + KEMV  G   NV ++
Sbjct: 214 GMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSY 273

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+V+  LCK   L +A  L   M  SG+ P+ V +  +++  C  G +  A  + R+M  
Sbjct: 274 NIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM-- 331

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              D   PN+ T N ++    K GR+  AEE+   M + G   +  T   +IDG    G 
Sbjct: 332 -MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGK 390

Query: 340 SEEALRLCDEMVKRG-----------------------LMPNNVVYNSTIHWLFAEGDVE 376
            ++A+ + + M   G                        MP+ + Y++ I  L   G V 
Sbjct: 391 LDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVG 450

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A     +M+ K++ PD   Y +     C+ G +  AF++   + ++       +YN LI
Sbjct: 451 EAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLI 510

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
             L   N +     L+  M  RG+ PD+  Y  ++   C+GG ++ A  V + M +    
Sbjct: 511 MGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGIS 570

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
           PN+  ++ +I   CK     A   + + +  +       Y+   N   + G++ +A  +F
Sbjct: 571 PNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELF 630

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
               +    V    Y  LI+ LCK      A  ++  +I  G   D  ++  ++    K 
Sbjct: 631 ETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKR 690

Query: 617 CSPEEVIELHDDMV 630
            +  E  EL + M+
Sbjct: 691 GNKHEADELAEKMM 704



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 183/436 (41%), Gaps = 77/436 (17%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DA +LM  LM+++ V P                    +  L+      G    A +V+++
Sbjct: 288 DARMLM-RLMTSSGVLP----------------DTVTYTTLLHGYCHTGKVSEANNVLRE 330

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           +   G S + +  N  L  L K   I    +L ++M   GYV +  T N+VI  LC   K
Sbjct: 331 MMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGK 390

Query: 232 LEEALSLYYRMLKSG-----------------------IWPNVVCFNMIINEACQVGDLE 268
           L++A+ +   M   G                         P+++ ++ II+  C+ G + 
Sbjct: 391 LDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVG 450

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A K F +M    G ++ P+S  ++  I+ FCK G++  A  +   M K G +  ++TY 
Sbjct: 451 EAKKKFIEM---MGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYN 507

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           +LI G        E   L DEM +RG+ P+  +YN+ +  L   G V+ A  VL +M+ K
Sbjct: 508 SLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQK 567

Query: 389 HICPDHFTYSILTKGLCR----------------------------------NGCVKQAF 414
            I P+  ++SIL K  C+                                   G V +A 
Sbjct: 568 GISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAK 627

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L    L+       + Y  LI++LCK   L  A  +L  +I +G   D  ++  +IDG 
Sbjct: 628 ELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGL 687

Query: 475 CKGGNIEGAVQVYENM 490
            K GN   A ++ E M
Sbjct: 688 GKRGNKHEADELAEKM 703



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 7/227 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   +++L+            Y +I +++ +G S  +  +NN LS L +   +    
Sbjct: 499 CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 558

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +  EM+  G   N+++F+++I A CK C    A+   + +  +        +++  NE 
Sbjct: 559 SVLDEMLQKGISPNISSFSILIKAFCKACDF-SAVDEIFEIALNVCGHKEALYSLTFNEL 617

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
              G++  A +LF      S D     +  +  +I+  CK  +++ A  I + +I  G  
Sbjct: 618 LVGGEVVKAKELFETALDRSFDV---GNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYW 674

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCD---EMVKRGLMPNNVVYNST 365
            +  ++  +IDG  + G+  EA  L +   EM   G + N V  N++
Sbjct: 675 FDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNKVHQNAS 721



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/288 (20%), Positives = 121/288 (42%), Gaps = 8/288 (2%)

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           DS + C      +  ++    + G    A     ++  K        ++ F+    K  +
Sbjct: 424 DSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGK 483

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
           I   +++ K+M   G  + + T+N +I  L  + ++ E   L   M + G+ P+V  +N 
Sbjct: 484 ISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNN 543

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +++  C+ G ++ A  +  +M +  G  + PN  + + +I  FCK       +EI    +
Sbjct: 544 VLSSLCEGGRVKDAPSVLDEM-LQKG--ISPNISSFSILIKAFCKACDFSAVDEIFEIAL 600

Query: 317 KAGIDCNVRT--YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
                C  +   Y+   +    GG   +A  L +  + R     N +Y   I  L  +  
Sbjct: 601 NV---CGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEK 657

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           ++ A  +L  +IDK    D  ++  +  GL + G   +A +L  +++E
Sbjct: 658 LDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 54/121 (44%)

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           YN L+      G++     +  +M   G++     +N+LI  LC  GC   AREL   M 
Sbjct: 24  YNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKMP 83

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             G  P+  ++  LV  + +     + +EL  +M   G SP+   YN +IS    E   +
Sbjct: 84  EKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTD 143

Query: 656 D 656
           D
Sbjct: 144 D 144


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 217/428 (50%), Gaps = 5/428 (1%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           +++EA+ +   M   G+ P+    N ++    ++G +E+A  LF +M       V PN V
Sbjct: 147 RVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEM---CARGVQPNCV 203

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           ++  ++ G+CKLG V  ++     MI+ G   +  T + ++  +   G    AL      
Sbjct: 204 SYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRF 263

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
            + GL PN + +   I  L   G V+ A  +L +M+ +   P+ +T++ L  GLC+ G  
Sbjct: 264 CEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWT 323

Query: 411 KQAFKLHNQ-VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           ++AF+L  + V  E+   +  +Y  +I+  C+   +  A+ LLS M  +GL P+  TY T
Sbjct: 324 EKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTT 383

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LIDG+CK GN E A ++   M +    PN+  YN+I++GLCK   +  A  +L++  R G
Sbjct: 384 LIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNG 443

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D +TY  LI+ +    +I +A  +F++M   GI  +   Y  LI   C+    +++ 
Sbjct: 444 LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESE 503

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              +  +  G++P   TYT+++  + +  +    ++    M   G + D+ TY A+IS L
Sbjct: 504 MFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGL 563

Query: 649 LGEKSAED 656
             +   ++
Sbjct: 564 CKQSKLDE 571



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 275/597 (46%), Gaps = 43/597 (7%)

Query: 55  APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLV--NWRRFDD 112
           +PS   S V RV S       L  + Y     + RFS         +HL V  N    D 
Sbjct: 32  SPSCVQSTVTRVCS-------LVYDSYHHHYNHARFSP------PTLHLDVDPNSLTHDQ 78

Query: 113 ALLLMGNLMS-ANSVSPLEFLEGLLDS---------YEICKAT----------PAVFDAL 152
           A+ ++ +L S A S+  L F    + S         Y  C A+            V   +
Sbjct: 79  AVTIVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCM 138

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           V++  +IG  + A +++ ++  +G + S    N  +  + ++  +     L+ EM + G 
Sbjct: 139 VKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGV 198

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             N  ++ +++   CK   + E+      M++ G   +    ++I+ E C+ G +  AL 
Sbjct: 199 QPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALW 258

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
            FR+   M    + PN +   C+I G CK G V+ A E+   M+  G   NV T+  LID
Sbjct: 259 YFRRFCEMG---LRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALID 315

Query: 333 GYARGGSSEEALRLCDEMVK-RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           G  + G +E+A RL  ++V+     PN + Y + I     +  +  A  +LS M ++ + 
Sbjct: 316 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLA 375

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  TY+ L  G C+ G  ++A++L N + EE    +  +YN +++ LCK   +  A ++
Sbjct: 376 PNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKV 435

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L S    GL  D +TY  LI  +CK   I+ A+ ++  M K   +P++  Y ++I   C+
Sbjct: 436 LKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCR 495

Query: 512 DASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  +  ++   + + R GL+    TY ++I GY   G +  A   F  M + G A + + 
Sbjct: 496 EKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSIT 555

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK---NCSPEEVIE 624
           Y  LI+ LCK     +AR L   MI  G+ P  VT  TL   + K    CS   V+E
Sbjct: 556 YGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLE 612



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 188/366 (51%), Gaps = 2/366 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
            C++  F ++GRV+ A E+   M   G+  + +T   ++      G  E A  L DEM  
Sbjct: 136 QCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCA 195

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG+ PN V Y   +      G+V  +   L  MI++    D+ T S++ +  C  G V +
Sbjct: 196 RGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTR 255

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A     +  E  +  +  ++  +I  LCK  ++  A ++L  M+ RG  P++ T+  LID
Sbjct: 256 ALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALID 315

Query: 473 GYCKGGNIEGAVQVYENMKKVE-KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           G CK G  E A +++  + + E  KPN++ Y ++I+G C+D  ++ A+ LL   +  GL 
Sbjct: 316 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLA 375

Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            +  TY TLI+G+   G    A+ + + M   G + N   YN +++ LCK G  Q+A ++
Sbjct: 376 PNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKV 435

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +K    +G+  D VTYT L++   K    ++ + L + MV SG+ PD  +Y  +I+    
Sbjct: 436 LKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCR 495

Query: 651 EKSAED 656
           EK  ++
Sbjct: 496 EKRMKE 501



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 191/371 (51%), Gaps = 7/371 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F  ++    + G+ + A+++++++  +G   +++     +  L K     + ++L+ ++V
Sbjct: 275 FTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 334

Query: 209 -SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S  +  NV T+  +I   C++ K+  A  L  RM + G+ PN   +  +I+  C+ G+ 
Sbjct: 335 RSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNF 394

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A +L   M VM+ +   PN  T+N I++G CK GRV+ A ++  +  + G+D +  TY
Sbjct: 395 ERAYEL---MNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTY 451

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI  + +    ++AL L ++MVK G+ P+   Y + I     E  ++ +     + + 
Sbjct: 452 TILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVR 511

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P + TY+ +  G CR G ++ A K  +++ +     D+ +Y  LI+ LCK + L  
Sbjct: 512 FGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDE 571

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+ L  +MI +GL P  +T  TL   YCK  +   A+ V E   ++EKK  +   N+++ 
Sbjct: 572 ARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLE---RLEKKLWVRTVNTLVR 628

Query: 508 GLCKDASLDAA 518
            LC +  +  A
Sbjct: 629 KLCSERKVGMA 639


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 236/488 (48%), Gaps = 25/488 (5%)

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K + I     L+  MV    + ++  F  ++  + K      A+ LY  M   G+ P  V
Sbjct: 31  KFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTV 90

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            FN++IN  C +G ++FA   F  MG +      PN VT   ++ GFC   ++  A  I 
Sbjct: 91  TFNILINCFCHMGQMDFA---FSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIY 147

Query: 313 YAMIKAGIDCNVRTYATLIDGYARG--GSSEEALRLCDEMVKRGLM-PNNVVYNSTIHWL 369
             M+   I  +   Y TLI+G  +   G    A++L  +M +R L+ PN ++YN+ +H L
Sbjct: 148 DEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGL 207

Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG------------C----VKQA 413
             +G++  A  + S MI + I PD FTYS L  GLCR G            C    V +A
Sbjct: 208 CKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEA 267

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
            +L N ++E     D  +YNIL+N  C +N +  A++L   M+ RG  PD ITY  L+ G
Sbjct: 268 RELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHG 327

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           YC    ++ A  ++  M +    P++  YN +I G CK   +  A +LL+      L+ +
Sbjct: 328 YCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPN 387

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV-GYNILINFLCKFGCYQQARELM 591
            ITYN++++G   +G I +A+ +  EM         V  YNIL+  LC+  C ++A    
Sbjct: 388 IITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFF 447

Query: 592 KVMIL-HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           K +I      P+  +Y  L++   KN   +E I L + M    + PD  TYN ++  L  
Sbjct: 448 KHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFN 507

Query: 651 EKSAEDQV 658
            +  +  +
Sbjct: 508 GQQLDKAI 515



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 238/498 (47%), Gaps = 23/498 (4%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           A D+   ++ KG       +N  ++    + ++   + +  +++  G   NV TF  ++ 
Sbjct: 73  AIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMK 132

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ--VGDLEFALKLFRKMGVMSG 282
             C   K+ +AL +Y  M+   I  + V +  +IN  C+  +G    A++L +KM     
Sbjct: 133 GFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKME--ER 190

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS-- 340
             V PN + +N +++G CK G +  A  +   MI  GI  ++ TY++LI G  R G    
Sbjct: 191 QLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKE 250

Query: 341 --------------EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
                         +EA  L + M++RG   + + YN  ++       V  A  +   M+
Sbjct: 251 VTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMV 310

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           ++   PD  TY+IL  G C    V +A  L + ++E  +V D +SYNILI   CK   + 
Sbjct: 311 ERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVG 370

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK-VEKKPNLVIYNSI 505
            A  LL  M ++ L+P+IITY +++DG CK G I  A ++ + M    +  P++  YN +
Sbjct: 371 EAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNIL 430

Query: 506 INGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +  LC+   ++ A +  +    +R    +  +YN LI+G   N ++ EA  +F+ M    
Sbjct: 431 LESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKN 490

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V YNIL++ L       +A  L+  ++  GI P+  TY  L+    K   P+   
Sbjct: 491 LVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQ 550

Query: 624 ELHDDMVLSGVSPDNQTY 641
           ++   + + G  PD +TY
Sbjct: 551 KISLYLSIRGYHPDVKTY 568



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 199/426 (46%), Gaps = 61/426 (14%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           CK   +++A++L++RM+     P++V F  I+    ++     A+ L+    +M    V+
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYT---LMEYKGVV 86

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P +VT N +IN FC +G+++F                                   A  +
Sbjct: 87  PFTVTFNILINCFCHMGQMDF-----------------------------------AFSV 111

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
             +++K G  PN V + + +        +  AL++  +M+ + I  D   Y  L  GLC+
Sbjct: 112 MGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCK 171

Query: 407 N--GCVKQAFKLHNQVLEEHMV-GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           +  G  + A +L  ++ E  +V  +   YN +++ LCK  N+  A+ L S MIV+G+ PD
Sbjct: 172 SKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPD 231

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           I TY +LI G C+ G            K+V          S++NG C +  +D A+ L  
Sbjct: 232 IFTYSSLIYGLCRAGQ----------RKEV---------TSLLNGFCLNNKVDEARELFN 272

Query: 524 AS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
              +R    D I YN L+NGY +N K+ EA  +F  M   G   + + Y IL++  C   
Sbjct: 273 VMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLID 332

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +AR L   MI  G++PD  +Y  L+  + K     E + L +DM L  + P+  TYN
Sbjct: 333 KVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYN 392

Query: 643 AIISPL 648
           +++  L
Sbjct: 393 SVVDGL 398



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
           ++  C+   +  A  L +++++ H +     +  ++  + K    A A  L + M  +G+
Sbjct: 26  SQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGV 85

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC-KDASLDAAK 519
           +P  +T+  LI+ +C  G ++ A  V   + K   +PN+V + +++ G C  D  LDA  
Sbjct: 86  VPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALY 145

Query: 520 SLLQASQRIGLLDAITYNTLINGYFIN--GKIAEAFAMFSEMRNVG-IAVNKVGYNILIN 576
              +   R    D + Y TLING   +  GK   A  +  +M     +  N + YN +++
Sbjct: 146 IYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVH 205

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG-VS 635
            LCK G   +AR L   MI+ GI PD  TY++L+    +    +EV  L +   L+  V 
Sbjct: 206 GLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVD 265

Query: 636 PDNQTYNAIIS 646
              + +N +I 
Sbjct: 266 EARELFNVMIE 276



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 40/285 (14%)

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           I   + A ++   +  +G    + ++N  +    K   +G    L ++M     V N+ T
Sbjct: 331 IDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIIT 390

Query: 219 FNLVIYALCKECKLEEALSLYYRM-LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           +N V+  LCK   + +A  L   M       P+V  +N+++   C++  +E A+  F+ +
Sbjct: 391 YNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHL 450

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             +   S  PN  ++N +I+G CK  R++                               
Sbjct: 451 --IFERSFAPNVWSYNILISGCCKNRRLD------------------------------- 477

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
               EA+ L + M  + L+P+ V YN  +  LF    ++ A+ +L  ++D+ I P+  TY
Sbjct: 478 ----EAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTY 533

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
           +IL  GL + G  K A K+   +       D  +Y  +IN LCK 
Sbjct: 534 NILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCKG 576



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 1/149 (0%)

Query: 510 CKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKI-AEAFAMFSEMRNVGIAVNK 568
           CK  S+D A +L      +  L +I   T I G     +  A A  +++ M   G+    
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V +NILIN  C  G    A  +M  ++  G  P+ VT+TTL+  F  N    + + ++D+
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           MV   +  D+  Y  +I+ L   K  + +
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPR 178


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 234/462 (50%), Gaps = 5/462 (1%)

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCF 254
           + G  ++++  M     V     F LV  A  K    E+A+ L+ RM+        V  F
Sbjct: 95  DFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSF 154

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N ++N   Q G    AL+ F + GV    ++ PN ++ N +I   CKLG V+ A E+   
Sbjct: 155 NSVLNVIIQEGLFHRALE-FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 213

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M     + +V TY TL+DG  +    +EA+ L DEM   G  P++V +N  I+ L  +GD
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           +     ++ +M  K   P+  TY+ +  GLC  G + +A  L ++++    V +  +Y  
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LIN L K         LLSS+  RG   +   Y TLI G  K    E A+ +++ M +  
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
            +PN+V+Y+++I+GLC++  LD AK +L      G   +A TY++LI G+F  G   +A 
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            ++ EM       N++ Y++LI+ LC+ G  ++A  +   M+  G+ PD V Y++++   
Sbjct: 454 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 513

Query: 614 SKNCSPEEVIELHDDMVL--SGVSPDNQTYNAIISPLLGEKS 653
               S E  ++L ++M+   S   PD  TYN ++  L  + S
Sbjct: 514 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 555



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 207/397 (52%), Gaps = 6/397 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+ +++A  ++G  + A +V +++ ++     +  +   +  L K + I     L  EM 
Sbjct: 191 FNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQ 250

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +  TFN++I  LCK+  +     L   M   G  PN V +N IIN  C  G L+
Sbjct: 251 IEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLD 310

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ L  +   M     +PN VT+  +ING  K GR      +  ++ + G   N   Y+
Sbjct: 311 KAVSLLDR---MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 367

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI G  +   SEEA+ L  +MV++G  PN VVY++ I  L  EG ++ A  +L +M++K
Sbjct: 368 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 427

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              P+ FTYS L KG  + G  ++A ++  ++ + + V +   Y++LI+ LC+   L  A
Sbjct: 428 GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREA 487

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVIYNSII 506
             + + M+ RGL PD++ Y ++I G C  G++E  ++++  M  ++ + +P++V YN ++
Sbjct: 488 MMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILL 547

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
             LCK  S+  A  LL +    G   D IT N  +N 
Sbjct: 548 RALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA 584



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 242/506 (47%), Gaps = 37/506 (7%)

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY------VENVNTFNLVIYALCKECKLE 233
           ++ ++N+ L+ +++     R  + Y+    CG         NV +FNLVI A+CK   ++
Sbjct: 150 TVRSFNSVLNVIIQEGLFHRALEFYE----CGVGGKTNISPNVLSFNLVIKAMCKLGLVD 205

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
            A+ ++  M      P+V  +  +++  C+   ++ A+ L  +M +   +   P+SVT N
Sbjct: 206 RAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI---EGCFPSSVTFN 262

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +ING CK G +    ++   M   G   N  TY T+I+G    G  ++A+ L D MV  
Sbjct: 263 VLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVAS 322

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
             +PN+V Y + I+ L  +G     + +LS + ++    + + YS L  GL +    ++A
Sbjct: 323 KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEA 382

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
             L  +++E+    +   Y+ LI+ LC+   L  AK++L  M+ +G  P+  TY +LI G
Sbjct: 383 MGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKG 442

Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-D 532
           + K GN + A++V++ M K    PN + Y+ +I+GLC+D  L  A  +       GL  D
Sbjct: 443 FFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPD 502

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEM--RNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + Y+++I+G    G +     +F+EM  +      + V YNIL+  LCK      A +L
Sbjct: 503 VVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDL 562

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSP---------EEVIELHDDMVLSGVS------ 635
           +  M+  G  PD +T    +    +  +P         E V+ LH    + G +      
Sbjct: 563 LNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVM 622

Query: 636 ------PDNQTYNAIISPLLGEKSAE 655
                 P+  T+  II  L   K  +
Sbjct: 623 LQKFLPPNASTWERIIPELCKPKKVQ 648



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 205/437 (46%), Gaps = 63/437 (14%)

Query: 141 ICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
           I K  P VF    L+    +    + A  ++ +++++G   S   +N  ++ L K  ++ 
Sbjct: 216 IQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMV 275

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           R  KL   M   G V N  T+N +I  LC + KL++A+SL  RM+ S   PN V +  +I
Sbjct: 276 RVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLI 335

Query: 259 NEACQVG-----------------------------------DLEFALKLFRKMGVMSGD 283
           N   + G                                     E A+ L++KM V  G 
Sbjct: 336 NGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKM-VEKG- 393

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
              PN V ++ +I+G C+ G+++ A+EI   M+  G   N  TY++LI G+ + G+S++A
Sbjct: 394 -CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           +R+  EM K   +PN + Y+  IH L  +G +  A+ + + M+ + + PD   YS +  G
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 512

Query: 404 LCRNGCVKQAFKLHNQVL--EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           LC  G V+   KL N++L  E     D  +YNIL+  LCK N+++ A  LL+SM+ RG  
Sbjct: 513 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 572

Query: 462 PDIITYGTLI-----------DG----------YCKGGNIEGAVQVYENMKKVEKKPNLV 500
           PD+IT    +           DG            K   I GA ++ E M +    PN  
Sbjct: 573 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 632

Query: 501 IYNSIINGLCKDASLDA 517
            +  II  LCK   + A
Sbjct: 633 TWERIIPELCKPKKVQA 649



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 168/354 (47%), Gaps = 21/354 (5%)

Query: 135 LLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LLD     K  P    +  L+    + G +     ++  L+ +GH  + +A++  +S L 
Sbjct: 315 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLF 374

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K  +      L+K+MV  G   N+  ++ +I  LC+E KL+EA  +   M+  G  PN  
Sbjct: 375 KEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAF 434

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            ++ +I    + G+ + A++++++   M+ ++ +PN + ++ +I+G C+ G++  A  + 
Sbjct: 435 TYSSLIKGFFKTGNSQKAIRVWKE---MAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 491

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV--KRGLMPNNVVYNSTIHWLF 370
             M+  G+  +V  Y+++I G    GS E  L+L +EM+  +    P+ V YN  +  L 
Sbjct: 492 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALC 551

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            +  +  A+ +L+ M+D+   PD  T +I    L              + L     G  +
Sbjct: 552 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL-------------REKLNPPQDGREF 598

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
             + L+  L K   +  A +++  M+ + L P+  T+  +I   CK   ++  +
Sbjct: 599 -LDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAII 651



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 10/338 (2%)

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVK--RGLMPNNVVYNSTIHWLFAEGDV-EGALFVL 382
           T+ +LI+ YA  G      ++ D M +  R  +  N +    +   + +  + E A+ + 
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFIL---VFRAYGKAHLPEKAIELF 138

Query: 383 SDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVL--EEHMVGDAYSYNILINYL 439
             M+D+  C     +++ +   + + G   +A + +   +  + ++  +  S+N++I  +
Sbjct: 139 GRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAM 198

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK   +  A ++   M ++   PD+ TY TL+DG CK   I+ AV + + M+     P+ 
Sbjct: 199 CKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSS 258

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
           V +N +INGLCK   +     L+      G + + +TYNT+ING  + GK+ +A ++   
Sbjct: 259 VTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDR 318

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M       N V Y  LIN L K G       L+  +   G   +   Y+TL++   K   
Sbjct: 319 MVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEK 378

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            EE + L   MV  G  P+   Y+A+I  L  E   ++
Sbjct: 379 SEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDE 416



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++ ++++   + G    A++ YE     K    PN++ +N +I  +CK   +D A  + +
Sbjct: 153 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 524 --ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
             A Q+    D  TY TL++G     +I EA  +  EM+  G   + V +N+LIN LCK 
Sbjct: 213 EMAIQKCEP-DVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKK 271

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +  +L+  M L G +P+ VTY T++         ++ + L D MV S   P++ TY
Sbjct: 272 GDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTY 331

Query: 642 NAIISPLLGEKSAEDQV 658
             +I+ L+ +  + D V
Sbjct: 332 GTLINGLVKQGRSVDGV 348


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 216/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       JL++     + 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  ++E A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G    A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ A     ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  +E A  +  +M+D  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
           G CK G++E A    + M K   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 533 AI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
            I TY  +IN +   G +     +  EM+  G
Sbjct: 380 EIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+ TLIDG+CK G + 
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVX 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  A      M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F K        +L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 153/294 (52%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    + PD +TYS+L  GLC+   ++ A +L  ++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  CK G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 133/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ ++ A  L +     GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E        M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   +E A +++E M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +  A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VXLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A    K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    +  AK L+  ++ R                    I DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFSGLII 74

Query: 473 GYCKGGNIEGAVQVY-------------------ENMKKVEK----------------KP 497
            Y + G +  A++ Y                   E++ K++                   
Sbjct: 75  AYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++   K+  +  A+S+  A  + GL  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK    + A EL + M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
                 +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 GRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 219/420 (52%), Gaps = 5/420 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A+++ L+    +      A +++  +   G+  S+  +   +  L K  ++     L ++
Sbjct: 11  AIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQK 70

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   NV T+  +I  LCK  +  +A+    RML+SG  P++V +N +I+  C    
Sbjct: 71  MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANR 130

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A  + +++ + SG   +P+ VT+N  I+G CK G+++   E+   M + GI  +V T
Sbjct: 131 MDDAGLVLQELMIESGR--IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           + ++I G  +    ++A ++   M++RG +P+++ Y+  +  L     ++    VL  M+
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                    TY+ L   L R G ++ A   + Q +E   V + Y++N  I  LC+S    
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE-KKPNLVIYNSI 505
            AK +L  MI  G +P++++Y  +IDG CK GN++ A ++   M      KP+++ +N++
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 368

Query: 506 INGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           I+G CK   L  A+ LL+   ++ I + D +TYNT+I+G    G + +A  +  EM+ VG
Sbjct: 369 ISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 219/431 (50%), Gaps = 7/431 (1%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M S  +  +   +N +I  LCK  K   AL L + M  +G   +VV +  +I+  C+ GD
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L+ A  L +KM   +     PN VT+  +I+G CK  R   A +    M+++G + ++ T
Sbjct: 61  LDAAQALLQKM---ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVT 117

Query: 327 YATLIDGYARGGSSEEA-LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           Y +LI G       ++A L L + M++ G +P+ V YN+ I  L   G ++  L +L +M
Sbjct: 118 YNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
               I PD  T+  +  GLC+   +  AF++   +LE   V D+ +Y+I+++ L ++N L
Sbjct: 178 DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 237

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
              +++L  M+  G      TY  LI    + G+IE A   YE   +      +  +N+ 
Sbjct: 238 DTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAF 297

Query: 506 INGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           I  LC+      AK++L      G L + ++YN +I+G   +G + +A+ +  +M + G 
Sbjct: 298 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 357

Query: 565 A-VNKVGYNILINFLCKFGCYQQARELMKVMILHGI-IPDYVTYTTLVTRFSKNCSPEEV 622
              + + +N LI+  CK G   QA++L+K M    I +PD VTY T++   SK  S ++ 
Sbjct: 358 CKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQA 417

Query: 623 IELHDDMVLSG 633
             L ++M   G
Sbjct: 418 KLLLEEMQAVG 428



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 195/389 (50%), Gaps = 6/389 (1%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A+   +  L+    + G  + A  ++QK+   G + ++  +   +  L K        + 
Sbjct: 43  ASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 102

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEA-LSLYYRMLKSGIWPNVVCFNMIINEAC 262
            K M+  G   ++ T+N +I+ LC   ++++A L L   M++SG  P+VV +N  I+  C
Sbjct: 103 VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLC 162

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G L+  L++  +   M    + P+ VT   II+G CK  R++ A ++   M++ G   
Sbjct: 163 KAGKLDKGLEMLEE---MDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 219

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +  TY+ ++D  +R    +    + + MVK G    +  Y   IH L   GD+E A +  
Sbjct: 220 DSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAY 279

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
              ++     + +T++     LCR+G    A  +   ++E   + +  SYN +I+ LCKS
Sbjct: 280 EQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKS 339

Query: 443 NNLAAAKQLLSSMIVRGLI-PDIITYGTLIDGYCKGGNIEGAVQVYENMK-KVEKKPNLV 500
            N+  A +L   M+  G   PD+I + TLI G+CK G +  A Q+ + MK K    P++V
Sbjct: 340 GNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVV 399

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIG 529
            YN++I+G  K  SL  AK LL+  Q +G
Sbjct: 400 TYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 172/362 (47%), Gaps = 3/362 (0%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           ++  +N +I G CK  +   A E+ + M   G D +V TY TLIDG  + G  + A  L 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            +M   G  PN V Y + I  L        A+  +  M+     PD  TY+ L  GLC  
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 408 GCVKQA-FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
             +  A   L   ++E   + D  +YN  I+ LCK+  L    ++L  M   G+ PD++T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           + ++I G CK   I+ A QV++ M +    P+ + Y+ +++ L +   LD  + +L+   
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 527 RIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           + G    + TY  LI+     G I  A   + +    G  +    +N  I  LC+ G + 
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG-VSPDNQTYNAI 644
            A+ ++  MI  G +P+ ++Y  ++    K+ + ++  +L   M+ SG   PD   +N +
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 368

Query: 645 IS 646
           IS
Sbjct: 369 IS 370



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 138/269 (51%), Gaps = 6/269 (2%)

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M  +H   D   Y+ L  GLC+    + A +L + +          +Y  LI+ LCKS +
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           L AA+ LL  M   G  P+++TY  LIDG CK      A+Q  + M +   +P+LV YNS
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 505 IINGLCKDASLDAAKSLLQ----ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           +I+GLC    +D A  +LQ     S RI   D +TYNT I+G    GK+ +   M  EM 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIP--DVVTYNTFISGLCKAGKLDKGLEMLEEMD 178

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI+ + V +  +I+ LCK      A ++ K M+  G +PD +TY+ ++   S+    +
Sbjct: 179 RGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLD 238

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLL 649
            V E+ + MV SG    + TY  +I  L+
Sbjct: 239 TVEEVLEHMVKSGHYALSATYAPLIHALI 267



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 2/301 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M  R    +  +YN+ I  L        AL +L  M          TY+ L  GLC++G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           +  A  L  ++ +     +  +Y  LI+ LCK+     A Q +  M+  G  PD++TY +
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 470 LIDGYCKGGNIEGA-VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           LI G C    ++ A + + E M +  + P++V YN+ I+GLCK   LD    +L+   R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G+  D +T+ ++I+G     +I +AF +F  M   G   + + Y+I+++ L +       
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
            E+++ M+  G      TY  L+    +    E     ++  + +G   +  T+NA I  
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300

Query: 648 L 648
           L
Sbjct: 301 L 301



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 2/204 (0%)

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  R    D   Y TLI G CK      A+++   M       ++V Y ++I+GLCK   
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           LDAA++LLQ     G   + +TY  LI+G     +  +A      M   G   + V YN 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 574 LINFLCKFGCYQQAR-ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           LI+ LC       A   L ++MI  G IPD VTY T ++   K    ++ +E+ ++M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
           G+SPD  T+ +IIS L      +D
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDD 204



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 28/279 (10%)

Query: 64  NRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL------- 114
           N  +S   K+ KL   LE    + +    S  + + C+I+  L    R DDA        
Sbjct: 155 NTFISGLCKAGKLDKGLEMLEEM-DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGML 213

Query: 115 ------------LLMGNLMSANSVSPLE-FLEGLLDSYEICKATPAVFDALVRACTQIGA 161
                       +++ NL  AN +  +E  LE ++ S     A  A +  L+ A  + G 
Sbjct: 214 ERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHY--ALSATYAPLIHALIRAGD 271

Query: 162 TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
            E A    ++    G  + ++  N F+  L +  +      +   M+  G + N+ ++N 
Sbjct: 272 IESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNF 331

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           VI  LCK   +++A  L  +ML SG   P+V+ FN +I+  C+ G L  A +L ++M   
Sbjct: 332 VIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEM--K 389

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           + +  +P+ VT+N +I+G  K G ++ A+ +   M   G
Sbjct: 390 AKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 42/88 (47%)

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN LI  LCK    + A EL+ VM  +G     VTYTTL+    K+   +    L   M 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            +G +P+  TY A+I  L   +   D +
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAI 100


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 268/580 (46%), Gaps = 21/580 (3%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
            P  AL ++  + E     H+ E+     + ++ + R  D +  M  +         EF+
Sbjct: 101 DPIRALSYFYSISEFPTVLHTTET----CNFMLEFLRVHDKVEDMAAV--------FEFM 148

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +      +I +     +  + +A +  G       V+ K++  G  ++ +++N  +  L+
Sbjct: 149 QK-----KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +    G   ++Y+ MVS G   ++ T++ ++ AL K+   E  + L   M   G+ PNV 
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            F + I    + G ++ A ++FR+M     +   P+ VT+  +I+  C  G++E A+E+ 
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRM---DDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M   G   +   Y TL+D +   G  +       +M   G MP+ V +   +  L   
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            D + A      M  + I P+  TY+ L  GL R G ++ A KL   +    +   AY+Y
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           NI I+Y  KS     A +    M  +G++P+I+     +    + G +  A  ++  +++
Sbjct: 441 NIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
               P+ V YN ++    K   +D A +LL    R G   D I  N+LI+  +  G++ E
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A+ MF  M+++ ++   V YN L++ L K G  Q+A EL + MI     P+ +++ TL+ 
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            F KN   E  +++   M +    PD  TYN +I  L+ E
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 253/567 (44%), Gaps = 69/567 (12%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             ++ +++  +++G  + A +++ ++   G    +   N+ +  L K   +   W+++  M
Sbjct: 509  TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                    V T+N ++  L KE ++++A+ L+  M++    PN + FN +++  C+  ++
Sbjct: 569  KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEV 628

Query: 268  EFALKLFRKMGVMS-------------------------------GDSVLPNSVTHNCII 296
            E ALK+F KM VM                                  S+ P+ VT   ++
Sbjct: 629  ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLL 688

Query: 297  NGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV---- 351
             G  K G++  A  I R  M +     N   +  L+ G       ++A+   +E+V    
Sbjct: 689  PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 352  --------------------------------KRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
                                            K G+ P    YN  I  L      E A 
Sbjct: 749  CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 380  FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
             +  DM +    PD FT+++L     ++G + + F+L+ +++      DA +YNI+I+ L
Sbjct: 809  DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 440  CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
             KSNNL  A      ++     P   TYG LIDG  K G +E A++++E M     KPN 
Sbjct: 869  AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 500  VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
             I+N +ING  K    + A  L +     G+  D  +Y  L++   + G++ EA   F+E
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 559  MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
            +++ G+  + + YN +IN L K    ++A  L   M   GI+PD  TY +L+        
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 619  PEEVIELHDDMVLSGVSPDNQTYNAII 645
             E+   +++++ L+G+ PD  TYNA+I
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALI 1075



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 247/585 (42%), Gaps = 83/585 (14%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C      +  L+ A    G  E A ++  K+K  GH      +   L       ++  
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
           F + + +M + GY+ +V TF +++  LCK    +EA + +  M K GI PN+  +N +I 
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              + G +E ALKL   +G M    V P + T+N  I+ F K G    A E    M   G
Sbjct: 411 GLLRAGRIEDALKL---LGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG 467

Query: 320 I-----DCNVRTYA-----------TLIDG-------------------YARGGSSEEAL 344
           I      CN   Y+           T+ +G                   Y++ G  +EA+
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAV 527

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
            L  EM++ G  P+ +V NS I  L+  G V+ A  +   M D  + P   TY+ L  GL
Sbjct: 528 NLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGL 587

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            + G V++A +L   ++E+    +  S+N L++  CK++ +  A ++ S M V    PD+
Sbjct: 588 GKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDV 647

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-----DASLDAAK 519
           +TY T+I G  K   +  A   +  +KK    P+ V   +++ GL K     DA   A  
Sbjct: 648 LTYNTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARD 706

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM-------------------- 559
            + Q   R+   +   +  L+ G  +  ++ +A     E+                    
Sbjct: 707 FMYQVRFRV---NRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLC 763

Query: 560 ----------------RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
                           + +GI+     YN LI  L +    ++A +L K M   G  PD 
Sbjct: 764 KHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDA 823

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            T+  L+    K+    E+ EL+ +M+     PD  TYN +IS L
Sbjct: 824 FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 233/484 (48%), Gaps = 19/484 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  K +   + AL+ A  +   +E    ++++++  G   +++ +   +  L +  +I  
Sbjct: 221 EGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDE 280

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            +++++ M   G   ++ T+ ++I ALC   +LE A  L+ +M  +G  P+ V +  +++
Sbjct: 281 AYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD 340

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           +    GDL+   + + +   M  D  +P+ VT   +++  CK    + A      M K G
Sbjct: 341 KFNDFGDLDTFKEFWSQ---MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N+ TY TLI G  R G  E+AL+L   M   G+ P    YN  I +    G+   A+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAV 457

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M  K I P+    +     L   G +++A  + N + E  +  D+ +YN+++   
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K   +  A  LLS MI  G  PD+I   +LID   K G ++ A Q+++ MK ++  P +
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577

Query: 500 VIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN++++GL K+  +  A  L ++  ++    + I++NTL++ +  N ++  A  MFS+
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637

Query: 559 MRNVGIAVNKVGYNILINFLCK-------FGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           M  +    + + YN +I  L K       F  + Q ++ M         PD+VT  TL+ 
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH--------PDHVTICTLLP 689

Query: 612 RFSK 615
              K
Sbjct: 690 GLVK 693



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 199/408 (48%), Gaps = 8/408 (1%)

Query: 101  VHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
            V   VN   ++D  L+ G L+ A     + F E L+ +  IC+    +   LVR   +  
Sbjct: 711  VRFRVNRSFWED--LMGGTLVEAEMDKAIIFAEELVLN-GICREDSFLI-PLVRVLCKHK 766

Query: 161  ATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                AY +  K   K G S ++ ++N  +  L++++   + W L+K+M + G   +  TF
Sbjct: 767  RELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTF 826

Query: 220  NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            N+++    K  K+ E   LY  M+     P+ + +N++I+   +  +L+ AL  F  +  
Sbjct: 827  NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL-- 884

Query: 280  MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            +S D   P   T+  +I+G  K+GR+E A  +   M   G   N   +  LI+GY + G 
Sbjct: 885  VSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943

Query: 340  SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +E A +L   MV  G+ P+   Y   +  L   G V+ AL+  +++    + PD   Y+ 
Sbjct: 944  TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003

Query: 400  LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
            +  GL ++  +++A  L+N++    +V D Y+YN L+  L  +  +  AK++   + + G
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063

Query: 460  LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            L PD+ TY  LI GY    N E A  VY+NM      PN+  Y  + N
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 217/501 (43%), Gaps = 38/501 (7%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            CK     ++ ++    +      A+    +LK   H   +      L  LVK  +IG   
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICT-LLPGLVKCGQIGDAI 701

Query: 202  KLYKE-MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             + ++ M    +  N + +  ++     E ++++A+     ++ +GI         ++  
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 261  ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             C+     +A ++F K     G S  P   ++NC+I    ++   E A ++   M   G 
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGIS--PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGC 819

Query: 321  DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              +  T+  L+  + + G   E   L  EM+ R   P+ + YN  I  L    +++ AL 
Sbjct: 820  APDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 381  VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
               D++     P   TY  L  GL + G +++A +L  ++ +     +   +NILIN   
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 441  KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
            K  +   A QL   M+  G+ PD+ +Y  L+D  C  G ++ A+  +  +K     P+ +
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 501  IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
             YN IINGL K             SQR                     + EA A+++EMR
Sbjct: 1000 AYNRIINGLGK-------------SQR---------------------MEEALALYNEMR 1025

Query: 561  NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
            N GI  +   YN L+  L   G  +QA+ + + + L G+ PD  TY  L+  +S + +PE
Sbjct: 1026 NRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPE 1085

Query: 621  EVIELHDDMVLSGVSPDNQTY 641
                ++ +M++ G +P+  TY
Sbjct: 1086 HAYTVYKNMMVDGCNPNIGTY 1106



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 193/443 (43%), Gaps = 14/443 (3%)

Query: 137  DSYEICKATPAVFDALVRACTQIG-ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
            D   IC   P +       C QIG A   A D + +++ +   V+   W + +   +   
Sbjct: 680  DHVTICTLLPGLV-----KCGQIGDAISIARDFMYQVRFR---VNRSFWEDLMGGTLVEA 731

Query: 196  EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCF 254
            E+ +     +E+V  G     +    ++  LCK  +   A  ++ +  K  GI P +  +
Sbjct: 732  EMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASY 791

Query: 255  NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            N +I E  +V   E A  LF+ M  +      P++ T N ++    K G++    E+   
Sbjct: 792  NCLIGELLEVHYTEKAWDLFKDMKNVG---CAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 315  MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
            MI      +  TY  +I   A+  + ++AL    ++V     P    Y   I  L   G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 375  VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            +E A+ +  +M D    P+   ++IL  G  + G  + A +L  +++ E +  D  SY I
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 435  LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
            L++ LC +  +  A    + +   GL PD I Y  +I+G  K   +E A+ +Y  M+   
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 495  KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
              P+L  YNS++  L     ++ AK + +  Q  GL  D  TYN LI GY ++     A+
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088

Query: 554  AMFSEMRNVGIAVNKVGYNILIN 576
             ++  M   G   N   Y  L N
Sbjct: 1089 TVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 1/297 (0%)

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  + +L     VE    V   M  K I  D  TY  + K L   G ++Q   + N++ +
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
              V +AYSYN LI+ L +S     A ++   M+  GL P + TY  L+    K  + E 
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
            + + + M+ +  +PN+  +   I  L +   +D A  + +     G   D +TY  LI+
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
                G++  A  +F +M+  G   ++V Y  L++    FG     +E    M   G +P
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           D VT+T LV    K    +E     D M   G+ P+  TYN +I  LL     ED +
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 255/522 (48%), Gaps = 13/522 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLK-VKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           C     V   L++A  +      A  V Q +  V G S +I ++N  L+  V+ ++  R 
Sbjct: 73  CPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARA 132

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
              +K   +     NV T+N+++  +CK+ + E+   L   M  +G+ P+ + +  +I  
Sbjct: 133 ENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGG 192

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG- 319
             + GDL FAL++F +M       V P+ V +N II+GF K G    A E+   +++   
Sbjct: 193 VAKSGDLGFALEVFDEM---RERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREEL 249

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  +V +Y  +I G  + G   E L + + M K     +   Y++ IH L   GD+ GA 
Sbjct: 250 VFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGAR 309

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +M+ + + PD  T + +  GLC+ G V++ F+L  + + +  + +  SYNI +  L
Sbjct: 310 KVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEE-MGKCSLRNVRSYNIFLKGL 368

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            ++  +  A  L   +    L  D  TYG ++ G C  G +  A+QV E  +  E   ++
Sbjct: 369 FENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDV 424

Query: 500 --VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMF 556
               Y+S+IN LCK+  LD A  +++   + G   ++   N LI+G+  + K+  A  +F
Sbjct: 425 DEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVF 484

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM   G ++  V YNILIN L +   +++A + +  M+  G  PD +TY+TL+    ++
Sbjct: 485 REMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYES 544

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              +  + L    + +G  PD   YN +I  L      ED +
Sbjct: 545 NMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDAL 586



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 234/491 (47%), Gaps = 10/491 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   F+ L+ A  +      A +  +  +    S ++  +N  +  + K  E  +  
Sbjct: 109 CSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGR 168

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L   M   G   +  T+  +I  + K   L  AL ++  M + G+ P+VVC+NMII+  
Sbjct: 169 GLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGF 228

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + GD   A +++ ++  +  + V P+ V++N +I+G CK GR     EI   M K    
Sbjct: 229 FKRGDFVKAGEMWERL--LREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERK 286

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
           C++ TY+ LI G +  G    A ++ +EMV RG+ P+ V  N+ ++ L   G+VE   F 
Sbjct: 287 CDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVE-ECFE 345

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L + + K    +  +Y+I  KGL  NG V  A  L + +LE     D+ +Y ++++ LC 
Sbjct: 346 LWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCW 401

Query: 442 SNNLAAAKQLLSSMIVR--GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           +  +  A Q+L     R  G+  D   Y +LI+  CK G ++ A  V E M K   K N 
Sbjct: 402 NGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNS 461

Query: 500 VIYNSIINGLCKDASLDAA-KSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
            + N +I+G  K + LD+A K   + S +   L  ++YN LING     +  EA+   +E
Sbjct: 462 HVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNE 521

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G   + + Y+ LI  L +      A  L    +  G  PD + Y  ++ R   +  
Sbjct: 522 MLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGK 581

Query: 619 PEEVIELHDDM 629
            E+ ++L+  +
Sbjct: 582 VEDALQLYSTL 592



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 127/505 (25%), Positives = 230/505 (45%), Gaps = 54/505 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI---GRFWK-- 202
            +  L+    + G    A +V  +++ +G    +  +N  +    K  +    G  W+  
Sbjct: 185 TYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERL 244

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L +E+V      +V ++N++I  LCK  +  E L ++ RM K+    ++  ++ +I+   
Sbjct: 245 LREELV----FPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLS 300

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + GDL  A K++ +M    G  V P+ VT N ++NG CK G VE   E+   M K  +  
Sbjct: 301 EAGDLGGARKVYEEM---VGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR- 356

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           NVR+Y   + G    G  ++A+ L D +    L  ++  Y   +H L   G V  AL VL
Sbjct: 357 NVRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVL 412

Query: 383 SDMIDKH--ICPDHFTYSILTKGLCRNGCVKQA-------------------------FK 415
            +   +   +  D F YS L   LC+ G + +A                         F 
Sbjct: 413 EEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFV 472

Query: 416 LHNQV-----LEEHMVGDA-----YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
            H+++     +   M G        SYNILIN L ++     A   ++ M+ +G  PDII
Sbjct: 473 KHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDII 532

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           TY TLI G  +   ++ A++++        KP++++YN +I+ LC    ++ A  L    
Sbjct: 533 TYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTL 592

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           ++   ++ +T+NT++ G++  G    A  +++ +    +  + + YNI +  LC  G   
Sbjct: 593 RQKKCVNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVT 652

Query: 586 QARELMKVMILHGIIPDYVTYTTLV 610
            A   +   ++ G +P  +T+  LV
Sbjct: 653 DAVGFLDDALVRGFLPTAITWNILV 677



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 154/312 (49%), Gaps = 20/312 (6%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV----------------FDAL 152
           + DDA++L   L+ A+S +    + GL  +  + +A   +                + +L
Sbjct: 373 KVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSL 432

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           + A  + G  + A  V++ +  +G   + H  N  +   VK +++    K+++EM   G 
Sbjct: 433 INALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGC 492

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
              V ++N++I  L +  +  EA      ML+ G  P+++ ++ +I    +   ++ AL+
Sbjct: 493 SLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALR 552

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
           L+ +  + +G    P+ + +N +I+  C  G+VE A ++ Y+ ++     N+ T+ T+++
Sbjct: 553 LWHQF-LDTGHK--PDIIMYNIVIHRLCSSGKVEDALQL-YSTLRQKKCVNLVTHNTIME 608

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ + G+ E A ++   +++  L P+ + YN T+  L + G V  A+  L D + +   P
Sbjct: 609 GFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLP 668

Query: 393 DHFTYSILTKGL 404
              T++IL + +
Sbjct: 669 TAITWNILVRAV 680


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 226/461 (49%), Gaps = 23/461 (4%)

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYD-----VIQKLKVKGHSVSI 181
           SP   L  L+ +       P     LV A  ++ A EG        ++  L+ +G  V +
Sbjct: 29  SPPRLLPLLVSAASTDDPAP-----LVSAVAKVYADEGLLPDGCSLLLLALR-RGIRVPM 82

Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
            AW++ ++ L  + E    +  Y  ++  G       FN+++  + +  KL  A +++  
Sbjct: 83  PAWSDLMNRLPSVPEA---YAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDE 139

Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
           ML+ G+ P VV FN +++  C+  DL  A  L    G+M+   + P+  T+   I G CK
Sbjct: 140 MLRRGVQPTVVTFNTLMSGMCKASDLNNANAL---RGLMAKAGIAPDVYTYGAFIQGLCK 196

Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
            GR++ A E+   M + G++ N     TLID + + G     L L  EM  RG+  + V 
Sbjct: 197 TGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVA 256

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           YN+ ++      D++ A  ++ +M    + PD  TY+ L  G C+ G +  A ++  ++ 
Sbjct: 257 YNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMS 316

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           +E +  D  +Y  LI+ L K+     A+++L  M+  GL PD  TY  +ID +CK G+++
Sbjct: 317 DEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVK 376

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
              +  + M+   K P +V YN ++NG C    +  A  LL A   IG+  + ITYN L+
Sbjct: 377 TGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILL 436

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVG-YNILINFLCK 580
           +G+  +GK+ +      E+++    V+  G Y  LIN   K
Sbjct: 437 DGHCKHGKVRDT----EELKSAKGMVSDFGVYTSLINEFVK 473



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 202/425 (47%), Gaps = 42/425 (9%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
           + EA + Y  +L +G+ P    FNM++ +  + G L  A  +F +M +  G  V P  VT
Sbjct: 95  VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEM-LRRG--VQPTVVT 151

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
            N +++G CK   +  A  +R  M KAGI  +V TY   I G  + G  ++A+ + +EM 
Sbjct: 152 FNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMC 211

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +RGL PN VV                    L+ +ID H               C+ G V 
Sbjct: 212 ERGLNPNTVV--------------------LTTLIDAH---------------CKEGDVT 236

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
              +L  ++    +  D  +YN L+N  C+  ++ AA  ++  M   GL PD +TY TLI
Sbjct: 237 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 296

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGL 530
           DG CK G ++ A+++ + M       + V Y ++I+GL K   S+DA + L +  +    
Sbjct: 297 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQ 356

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TY  +I+ +  NG +   F    EM+N G     V YN+++N  C  G  + A  L
Sbjct: 357 PDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADML 416

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +  M+  G+ P+ +TY  L+    K+    +  EL       G+  D   Y ++I+  + 
Sbjct: 417 LNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLINEFVK 473

Query: 651 EKSAE 655
           +KSA+
Sbjct: 474 KKSAK 478



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 164/332 (49%), Gaps = 4/332 (1%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ GI   +  ++ L++   R  S  EA      ++  G+ P    +N  +  +   G +
Sbjct: 74  LRRGIRVPMPAWSDLMN---RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKL 130

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
             A  V  +M+ + + P   T++ L  G+C+   +  A  L   + +  +  D Y+Y   
Sbjct: 131 ASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAF 190

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I  LCK+  +  A ++   M  RGL P+ +   TLID +CK G++   +++   M     
Sbjct: 191 IQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGV 250

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
           K +LV YN+++NG C+   + AA  +++  ++ GL  D +TY TLI+G    G++  A  
Sbjct: 251 KADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAME 310

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
           M  EM + G+A++ V Y  LI+ L K G    A  ++  M+  G+ PD  TYT ++  F 
Sbjct: 311 MKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFC 370

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           KN   +   +   +M   G +P   TYN +++
Sbjct: 371 KNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMN 402


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 261/517 (50%), Gaps = 6/517 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T  V+ +L+ A       E A   ++K+K +G  +S+  ++  +    K+ +      
Sbjct: 300 EPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADH 359

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            +KE        N   +  +IYA C+ C + +A +L   M + GI   +  ++ +++   
Sbjct: 360 WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYT 419

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G+ E  L +F ++         P+ +++ C+IN + K+G+V  A E+   M  AGI  
Sbjct: 420 IIGNEEKCLIVFDRLKECG---FTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKH 476

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N++TY+ LI+G+ R      A  + +++VK GL P+ V+YN+ I      G+++ A+  +
Sbjct: 477 NMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTV 536

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  +   P   T+  +  G  R+G +++A ++ + +     +   +++N LI  L + 
Sbjct: 537 KEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEK 596

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A ++L  M + G+ P+  TY T++ GY   G+   A + +  +K    + ++  Y
Sbjct: 597 CQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTY 656

Query: 503 NSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            +++   CK   + +A ++ +  +SQ+I   +   YN LI+G+   G + EA  +  +M+
Sbjct: 657 EALLKACCKSGRMQSALAVTREMSSQKIPR-NTFVYNILIDGWARRGDVWEAAELMQQMK 715

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  +   Y   IN  CK G  Q+A + ++ M + G+ P+  TYTTL+  +++   PE
Sbjct: 716 QEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPE 775

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           + ++   +M  +G+ PD   Y+ +++ LL   S  ++
Sbjct: 776 KALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 812



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 187/383 (48%), Gaps = 5/383 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           + D  + C  TP+V  +  L+    +IG    A +V + ++V G   ++  ++  ++  V
Sbjct: 430 VFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFV 489

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +L +    + +++++V  G   +V  +N +I A C    ++ A+     M K    P   
Sbjct: 490 RLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTR 549

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            F  II+   + GD+  AL++F    +M     +P   T N +I G  +  ++E A EI 
Sbjct: 550 TFMPIIHGFARSGDMRRALEIF---DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEIL 606

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M  AGI  N  TY T++ GYA  G + +A     ++   GL  +   Y + +      
Sbjct: 607 DEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKS 666

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G ++ AL V  +M  + I  + F Y+IL  G  R G V +A +L  Q+ +E +  D ++Y
Sbjct: 667 GRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTY 726

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              IN  CK+ ++  A + +  M V G+ P+I TY TLI G+ +    E A++ ++ MK 
Sbjct: 727 TSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS 786

Query: 493 VEKKPNLVIYNSIINGLCKDASL 515
              KP+  +Y+ ++  L   AS+
Sbjct: 787 AGLKPDKAVYHCLMTSLLSRASV 809



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 206/444 (46%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           ++ M + G     + +  +I+A      +EEALS   +M + GI  ++V +++++    +
Sbjct: 291 FESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK 350

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           + D E A   F++       + L N++ +  II   C+   +  AE +   M + GID  
Sbjct: 351 IADAEAADHWFKE--AKERHTTL-NAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAP 407

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           +  Y T++DGY   G+ E+ L + D + + G  P+ + Y   I+     G V  AL V  
Sbjct: 408 IDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSK 467

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M    I  +  TYS+L  G  R      AF +   V+++ +  D   YN +I   C   
Sbjct: 468 MMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMG 527

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N+  A + +  M      P   T+  +I G+ + G++  A+++++ M+     P +  +N
Sbjct: 528 NMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFN 587

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I GL +   ++ A  +L      G+  +  TY T+++GY   G   +AF  F++++  
Sbjct: 588 ALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTE 647

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+ ++   Y  L+   CK G  Q A  + + M    I  +   Y  L+  +++     E 
Sbjct: 648 GLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEA 707

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            EL   M   GV PD  TY + I+
Sbjct: 708 AELMQQMKQEGVQPDIHTYTSFIN 731



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 157/357 (43%), Gaps = 36/357 (10%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           + +  ++  YAR G    A    + M  RG+ P + VY S IH      D+E AL  +  
Sbjct: 269 KEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRK 328

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M ++ I     TYSIL  G  +    + A     +  E H   +A  Y  +I   C++ N
Sbjct: 329 MKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACN 388

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ L+  M   G+   I  Y T++DGY   GN E  + V++ +K+    P+++ Y  
Sbjct: 389 MTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGC 448

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN   K   +  A  + +  +  G+   + TY+ LING+      A AFA+F ++   G
Sbjct: 449 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 508

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVM--------------ILHGI---------- 599
           +  + V YN +I   C  G   +A   +K M              I+HG           
Sbjct: 509 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 568

Query: 600 -----------IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                      IP   T+  L+    + C  E+ +E+ D+M L+G+SP+  TY  I+
Sbjct: 569 EIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 625



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 32/299 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +++ ++RA   +G  + A   +++++ + H  +   +   +    +  ++ R  +++  M
Sbjct: 515 LYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMM 574

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G +  V+TFN +I  L ++C++E+A+ +   M  +GI PN   +  I++    +GD 
Sbjct: 575 RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDT 634

Query: 268 EFALKLFRKMGV--------------------------------MSGDSVLPNSVTHNCI 295
             A + F K+                                  MS   +  N+  +N +
Sbjct: 635 GKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNIL 694

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G+ + G V  A E+   M + G+  ++ TY + I+   + G  + A +   EM   G+
Sbjct: 695 IDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGV 754

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
            PN   Y + IH        E AL    +M    + PD   Y  L   L     V + +
Sbjct: 755 KPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEY 813



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 1/260 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P    + ++     R G +  A      +    +   ++ Y  LI+      ++  A   
Sbjct: 266 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 325

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M   G+   ++TY  L+ G+ K  + E A   ++  K+     N +IY +II   C+
Sbjct: 326 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 385

Query: 512 DASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             ++  A++L++  +  G+   I  Y+T+++GY I G   +   +F  ++  G   + + 
Sbjct: 386 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 445

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LIN   K G   +A E+ K+M + GI  +  TY+ L+  F +         + +D+V
Sbjct: 446 YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV 505

Query: 631 LSGVSPDNQTYNAIISPLLG 650
             G+ PD   YN II    G
Sbjct: 506 KDGLKPDVVLYNNIIRAFCG 525


>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           cujabensis]
          Length = 409

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 213/412 (51%), Gaps = 6/412 (1%)

Query: 82  TWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDS 138
           TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       +L++
Sbjct: 1   TWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLET 60

Query: 139 YEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
               ++   VF  L+ A  + G    A +  +        V        L HL+KL    
Sbjct: 61  KGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFK 120

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
             W  Y+E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++
Sbjct: 121 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 180

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           N   ++GDL+     FR    M      P+  T++ +ING CK  +++ A E+   M+  
Sbjct: 181 NGYIRLGDLDEG---FRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVK 237

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD++ A
Sbjct: 238 GLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 297

Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
             ++ +M  K + PD FTY+ L  G C+ G +  AF    ++++E++  D  +Y  LI+ 
Sbjct: 298 HDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISG 357

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M
Sbjct: 358 LCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 144/270 (53%), Gaps = 1/270 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 127 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 186

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L      D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 187 GDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTF 246

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 247 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSX 306

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D  TY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 307 KGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 366

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           A ++++ M+  G+ PD  TYT ++  F K 
Sbjct: 367 AEKMLREMLSVGLXPDAGTYTMIINEFCKK 396



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 148/268 (55%), Gaps = 1/268 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 142 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 201

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+   Y+  I+ L  E  ++GA  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 202 SGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 261

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M  +GL PD  TY TLID
Sbjct: 262 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLID 321

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A    + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 322 GCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXP 381

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEM 559
           DA TY  +IN +   G + +   +  EM
Sbjct: 382 DAGTYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 154/292 (52%), Gaps = 11/292 (3%)

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
           F EEI    ++ G   ++  +  L+  + + G    A  + D + K GL P+ V YN+ +
Sbjct: 125 FYEEI----LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 180

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +     GD++    + S M+     PD +TYS+L  GLC+   +  A +L +++L + +V
Sbjct: 181 NGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLV 240

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  ++  LI+  CK+  +  A ++   M+ + L+PD+ITY TLI G CK G+++ A  +
Sbjct: 241 PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL 300

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLING 542
            + M     KP+   Y ++I+G CK+  LD A    K ++Q + R   LD + Y  LI+G
Sbjct: 301 IDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIR---LDDVAYTALISG 357

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
               G+  +A  M  EM +VG+  +   Y ++IN  CK G   +  +L+K M
Sbjct: 358 LCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 120 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 179

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M      P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 180 MNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGL 239

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  +  + + YN LI  LCK G  +QA +
Sbjct: 240 VPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 299

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M   G+ PD  TYTTL+    K    +        M+   +  D+  Y A+IS L 
Sbjct: 300 LIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLC 359

Query: 650 GEKSAED 656
            E  + D
Sbjct: 360 QEGRSVD 366



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C++G ++ A  + + + +  +     SYN L+N   +  +L    +L S+
Sbjct: 139 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 198

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G  PD+ TY  LI+G CK   ++GA ++++ M      PN V + ++I+G CK+  
Sbjct: 199 MLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 258

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +      LL D ITYNTLI G    G + +A  +  EM   G+  +K  Y  
Sbjct: 259 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTT 318

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G    A    K MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 319 LIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 378

Query: 634 VSPDNQTYNAIIS 646
           + PD  TY  II+
Sbjct: 379 LXPDAGTYTMIIN 391



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E  +     +   ++ +L K           
Sbjct: 67  DIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 126

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
             ++  G    +  +  L+  +CK G+I  A  V++ + K   +P++V YN+++NG  + 
Sbjct: 127 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 186

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A    G   D  TY+ LING     K+  A  +F EM   G+  N V +
Sbjct: 187 GDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTF 246

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   ++PD +TY TL+    K    ++  +L D+M  
Sbjct: 247 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSX 306

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 307 KGLKPDKFTYTTLI 320


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 236/494 (47%), Gaps = 5/494 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  TP ++   + A  +     GA  V++ L  +G ++ +   N  L  +     +    
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201

Query: 202 KLYKEMV-SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
           +L ++++ S G   +V ++N V+  LC   +      L   M+ +G  PN+V F+ +I  
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+ G  E   ++      M+     P+   +  II+G CK  R+E A  I   M   G+
Sbjct: 262 LCRNGLFE---RVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV  Y TL+ G       EEA  L  EM  +    ++V +N  + +L   G V+  + 
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL  M++    PD  TY+ +  G C+ G + +A  L   +       +  SY I++  LC
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
            +     A++L+S MI +G  P+ +T+ TLI+  CK G +E A+++ + M      P+L+
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 498

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y+++I+GL K  + D A  LL    + G+  + I Y+++ +     G+I +   MF  +
Sbjct: 499 SYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENI 558

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           ++  +  + V YN +I+ LCK G   +A E +  M+  G +P+  TYT L+   +     
Sbjct: 559 QDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 618

Query: 620 EEVIELHDDMVLSG 633
           +E  E+  ++   G
Sbjct: 619 KEAQEILTELCSKG 632



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 236/473 (49%), Gaps = 5/473 (1%)

Query: 179 VSIHAWNNF--LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
           V+ +A+  F  +  L     I     +  +M   G       +++ + A C+      A+
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
            +   +   G   +V   N+++   C  G ++ A++L R +  +      P+ V++N ++
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDL--LPSFGCEPDVVSYNAVL 224

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
            G C   R    +++   M+ AG   N+ T++TLI    R G  E    +  +M + G  
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
           P+  +Y + I  +  E  +E A  +L+ M    + P+   Y+ L KGLC     ++A  L
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++ ++    D  ++NIL+++LC++  +    ++L  M+  G +PD+ITY T+I+G+CK
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDAIT 535
            G I+ AV +  +M     +PN V Y  ++ GLC  +  +DA + + Q  Q+    + +T
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           +NTLIN     G + +A  +  +M   G + + + Y+ +I+ L K G   +A EL+ VM+
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             G+ P+ + Y+++ +  S      +VI++ +++  + V  D   YNA+IS L
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSL 577



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 213/446 (47%), Gaps = 4/446 (0%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C Q    E    +   L   G    + ++N  L  L      G    L +EMV+ G   N
Sbjct: 192 CDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPN 251

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           + TF+ +I  LC+    E    ++ +M + G  P+V  +  II+  C+   LE A  +  
Sbjct: 252 IVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILN 311

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M       + PN V +N ++ G C   R E AE +   M       +  T+  L+D   
Sbjct: 312 RM---PSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  +  + + ++M++ G MP+ + Y + I+    EG ++ A+ +L  M      P+  
Sbjct: 369 QNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTV 428

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +Y+I+ KGLC       A +L +Q++++    +  ++N LIN+LCK   +  A +LL  M
Sbjct: 429 SYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 488

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           +V G  PD+I+Y T+IDG  K GN + A+++   M K    PN +IY+SI + L  +  +
Sbjct: 489 LVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRI 548

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           +    + +  Q   +  DA+ YN +I+     G+   A    + M + G   N+  Y IL
Sbjct: 549 NKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTIL 608

Query: 575 INFLCKFGCYQQARELMKVMILHGII 600
           I  L   G  ++A+E++  +   G +
Sbjct: 609 IRGLASEGFVKEAQEILTELCSKGAL 634



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 235/503 (46%), Gaps = 7/503 (1%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           LVRA    G    A  V+  +  +G + +   ++  L    + +       + +++   G
Sbjct: 117 LVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFNMIINEACQVGDLEFA 270
              +V   NLV+ A+C +  ++EA+ L   +L S G  P+VV +N ++   C        
Sbjct: 177 CALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHV 236

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             L  +M V +G    PN VT + +I   C+ G  E   E+   M + G   +VR YAT+
Sbjct: 237 QDLMEEM-VAAG--CPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATI 293

Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
           IDG  +    E A  + + M   GL PN V YN+ +  L +    E A  +L++M DK  
Sbjct: 294 IDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD- 352

Query: 391 CP-DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           CP D  T++IL   LC+NG V +  ++  Q+LE   + D  +Y  +IN  CK   +  A 
Sbjct: 353 CPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 412

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            LL SM   G  P+ ++Y  ++ G C       A ++   M +    PN V +N++IN L
Sbjct: 413 MLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFL 472

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CK   ++ A  LL+     G   D I+Y+T+I+G    G   EA  + + M   G++ N 
Sbjct: 473 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNT 532

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           + Y+ + + L   G   +  ++ + +    +  D V Y  +++   K    +  IE    
Sbjct: 533 IIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAY 592

Query: 629 MVLSGVSPDNQTYNAIISPLLGE 651
           MV SG  P+  TY  +I  L  E
Sbjct: 593 MVSSGCVPNESTYTILIRGLASE 615



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 217/439 (49%), Gaps = 5/439 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  T+  ++ ALC   ++ +AL++   M + G  P    +++ +  AC+      A+ + 
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVL 169

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDG 333
           R +    G     +    N ++   C  G V+ A  +   ++ + G + +V +Y  ++ G
Sbjct: 170 RDL---HGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
                       L +EMV  G  PN V +++ I  L   G  E    V + M +    PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              Y+ +  G+C+   ++ A  + N++    +  +   YN L+  LC ++    A+ LL+
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M  +    D +T+  L+D  C+ G ++  ++V E M +    P+++ Y ++ING CK+ 
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406

Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +D A  LL++    G   + ++Y  ++ G     +  +A  + S+M   G   N V +N
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LINFLCK G  +QA EL+K M+++G  PD ++Y+T++    K  + +E +EL + MV  
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKK 526

Query: 633 GVSPDNQTYNAIISPLLGE 651
           G+SP+   Y++I S L GE
Sbjct: 527 GMSPNTIIYSSIASALSGE 545



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 212/436 (48%), Gaps = 5/436 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           +  L  LL S+  C+     ++A++R            D+++++   G   +I  ++  +
Sbjct: 201 VRLLRDLLPSFG-CEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLI 259

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
            HL +     R  +++ +M   G   +V  +  +I  +CKE +LE A  +  RM   G+ 
Sbjct: 260 GHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLS 319

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PNVVC+N ++   C     E A  L  +M     D  L + VT N +++  C+ G V+  
Sbjct: 320 PNVVCYNTLLKGLCSADRWEEAEGLLAEM--FDKDCPL-DDVTFNILVDFLCQNGLVDRV 376

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            E+   M++ G   +V TY T+I+G+ + G  +EA+ L   M   G  PN V Y   +  
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKG 436

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L +      A  ++S MI +   P+  T++ L   LC+ G V+QA +L  Q+L      D
Sbjct: 437 LCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 496

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY+ +I+ L K+ N   A +LL+ M+ +G+ P+ I Y ++       G I   +Q++E
Sbjct: 497 LISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFE 556

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
           N++    + + V+YN++I+ LCK    D A   L      G + +  TY  LI G    G
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEG 616

Query: 548 KIAEAFAMFSEMRNVG 563
            + EA  + +E+ + G
Sbjct: 617 FVKEAQEILTELCSKG 632



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 164/393 (41%), Gaps = 73/393 (18%)

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N ++ G+C+ G++  A  +  ++  A    N  TY  L+      G   +AL + D+M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVPVAP---NAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           +RG  P   +Y+ T+          GA+ VL D+  +    D    +++ + +C  G V 
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 412 QAFKLHNQVLEEHMV-GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           +A +L   +L       D  SYN ++  LC +      + L+  M+  G  P+I+T+ TL
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I   C+ G  E   +V+  M +    P++ +Y +II+G+CK+  L+              
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV------------- 305

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL---------------- 574
                                A  + + M + G++ N V YN L                
Sbjct: 306 ---------------------ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344

Query: 575 -------------------INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
                              ++FLC+ G   +  E+++ M+ HG +PD +TYTT++  F K
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               +E + L   M   G  P+  +Y  ++  L
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGL 437



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 128/303 (42%), Gaps = 40/303 (13%)

Query: 130 EFLEGLLDSY--EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           E  EGLL     + C      F+ LV    Q G  +   +V++++   G    +  +   
Sbjct: 339 EEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTV 398

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           ++   K   I     L + M +CG   N  ++ +V+  LC   +  +A  L  +M++ G 
Sbjct: 399 INGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGC 458

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
            PN V FN +IN  C+ G +E A++L ++M V   +   P+ ++++ +I+G  K G  + 
Sbjct: 459 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGNTDE 515

Query: 308 AEEIRYAMIKAGI-------------------------------DCNVRT----YATLID 332
           A E+   M+K G+                               D  VR+    Y  +I 
Sbjct: 516 ALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVIS 575

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
              + G ++ A+     MV  G +PN   Y   I  L +EG V+ A  +L+++  K    
Sbjct: 576 SLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALR 635

Query: 393 DHF 395
            H 
Sbjct: 636 KHL 638


>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
 gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
          Length = 808

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/598 (26%), Positives = 273/598 (45%), Gaps = 51/598 (8%)

Query: 89  RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV 148
           RF H     C  +     WR   D L  M +   ++S   L   + L   ++   +   V
Sbjct: 98  RFRH-----CHELLWQTRWREMRDGLAQMVDEQGSDSAPTL--CDILWSGFKEWDSNSIV 150

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +DAL  +  +      A  V+ K+      +SI  +++ L  L K +      +++KEM 
Sbjct: 151 WDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKADVA---LEIFKEME 207

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW-PNVVCFNMIINEACQVGDL 267
           SCG   +  + +++I  LCK+ K+ EALS    + K G + P  + FN +++  C  G +
Sbjct: 208 SCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFI 267

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  +F    +M    + P+  T++ II+G CK+G V  A  I  ++ + G++ ++ T 
Sbjct: 268 QDAKSVF---CLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTC 324

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            +LI+G+   G + E  ++ + M   G+ P+ V Y   I      GDVE  + +  D++ 
Sbjct: 325 NSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILG 384

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY--------- 438
           + +  +  TYS+L   L + G   +   L  ++    +  D  +Y+ILI+          
Sbjct: 385 QGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGR 444

Query: 439 ---------------------------LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
                                      LCK   L  A+  L ++  +    D++ Y  +I
Sbjct: 445 ALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVI 504

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           DGY K G+I  AVQ+Y+ +      P +V  NS++ G CK   L  A+S   A Q   LL
Sbjct: 505 DGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLL 564

Query: 532 DA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
              +TY TL++     GK+    ++F EM   GI  N V Y+++I  LCK   +  A+ +
Sbjct: 565 PTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNV 624

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +  M + G   D + Y TL+  F +    +    +++ MV  GV P   TYN +++ L
Sbjct: 625 LDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVL 682



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 237/569 (41%), Gaps = 45/569 (7%)

Query: 84  VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK 143
           +GE   F   +      + L + +     AL   G +  A SV  L    GL  S     
Sbjct: 231 IGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRH--- 287

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
                +  ++    +IG+   A+++ Q +  +G  + I   N+ ++            K+
Sbjct: 288 ----TYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKM 343

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN---- 259
            + M   G   ++ T+ ++I   C+   +EE + +   +L  G+  N+V ++++IN    
Sbjct: 344 IEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFK 403

Query: 260 ------------EACQVG-------------------DLEFALKLFRKMGVMSGDSVLPN 288
                       E C VG                   ++  AL+++  M   S   V P 
Sbjct: 404 KGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLM--CSSQRVTPT 461

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
           SV H  I+ G CK G ++ A      +       +V  Y  +IDGYA+ G    A++L D
Sbjct: 462 SVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYD 521

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            ++  G+ P  V  NS ++     GD+  A    + +    + P   TY+ L   L   G
Sbjct: 522 AIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAG 581

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            V     L  ++  + +  +A +Y+++I  LCK      AK +L  M + G   D I Y 
Sbjct: 582 KVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYN 641

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           TLI G+C+  + + A  VYE M      P  V YN ++N LC    +  A+  L++ ++ 
Sbjct: 642 TLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQ 701

Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
           G  L    Y TLI      G   +A   F ++ + G   +   ++  IN LCK    ++A
Sbjct: 702 GAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEA 761

Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKN 616
             L+ +M+  G+ PD   Y  L T   K 
Sbjct: 762 LMLVPIMLSVGVYPDVELYRVLGTAVQKK 790


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 214/395 (54%), Gaps = 4/395 (1%)

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
           N++++  C+ G ++  ++L RK+     +   P+ V++N ++ G C   R +  EE+   
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCE---PDIVSYNAVLKGLCMAKRWDDVEELMVE 238

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M++ G   NV T+ TLI    R G  E+      +M + G  P+  +Y + I  +  +G 
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            E A  +LS M    + P+   Y+ + KGLC     ++A  L  ++ +E    D  ++NI
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L+++ C++  +    +LL  M+  G IPD+ITY T+I+G+CK G ++ AV + +NM    
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418

Query: 495 KKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
            KPN + Y  ++ GLC+ +  +DA + +    Q+  L + +T+NTLIN     G + +A 
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            +  +M   G + + + Y+ +I+ L K G  ++A EL+ VMI  GI P+ + Y+++ +  
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538

Query: 614 SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           S+    +++I++ D +  + V  D   YNA+IS L
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSL 573



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 225/470 (47%), Gaps = 4/470 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C ATP +   ++ A  + G    A   +Q L  KG ++     N  +S + +   +    
Sbjct: 139 CAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGV 198

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L +++ S G   ++ ++N V+  LC   + ++   L   M++ G  PNV  FN +I   
Sbjct: 199 ELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYL 258

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G  E   ++   +  M      P+   +  II+G CK G  E A +I   M   G+ 
Sbjct: 259 CRNGLFE---QVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 315

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV  Y T++ G       EEA  L  EM +     ++V +N  + +    G V+  + +
Sbjct: 316 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 375

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M++    PD  TY+ +  G C+ G V +A  L   +       +  SY I++  LC+
Sbjct: 376 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 435

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +     A++L+S MI +G +P+ +T+ TLI+  CK G +E A+++ + M      P+L+ 
Sbjct: 436 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLIS 495

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+++I+GL K    + A  LL      G+  + I Y+++ +     G+  +   MF  ++
Sbjct: 496 YSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQ 555

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           +  +  +   YN +I+ LCK     +A +    M+ +G +P+  TYT L+
Sbjct: 556 DATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILI 605



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 216/442 (48%), Gaps = 4/442 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           +V A  + G  +   ++++KL   G    I ++N  L  L          +L  EMV  G
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              NV TFN +I  LC+    E+      +M + G  P++  +  II+  C+ G  E A 
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 303

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            +  +M       + PN V +N ++ G C   R E AE++   M +     +  T+  L+
Sbjct: 304 DILSRM---PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILV 360

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           D + + G  +  + L ++M++ G +P+ + Y + I+    EG V+ A+ +L +M      
Sbjct: 361 DFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCK 420

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  +Y+I+ KGLCR      A +L + ++++  + +  ++N LIN++CK   +  A +L
Sbjct: 421 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIEL 480

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M+V G  PD+I+Y T+IDG  K G  E A+++   M      PN +IY+S+ + L +
Sbjct: 481 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 540

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +   D    +  + Q   +  DA  YN +I+      +   A   F+ M + G   N+  
Sbjct: 541 EGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 600

Query: 571 YNILINFLCKFGCYQQARELMK 592
           Y ILI  L   G  ++A++L+ 
Sbjct: 601 YTILIRGLASEGLVREAQDLLS 622



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 237/504 (47%), Gaps = 10/504 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
             AL+R+    G T    D  + L   G +  + A+N  ++   +    G+     +   
Sbjct: 47  LSALIRSLCAAGRTA---DAARALDTAGDAAGVVAYNAMIAGYCR---AGQVAAARRLAA 100

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           +     N  T+  ++ +LC    + +AL++   M   G        ++I+  AC+ G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+   R + V+       +S   N +++  C+ G V+   E+   +   G + ++ +Y 
Sbjct: 161 SAV---RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYN 217

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            ++ G       ++   L  EMV+ G  PN   +N+ I +L   G  E     LS M + 
Sbjct: 218 AVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEH 277

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
              PD   Y+ +  G+C++G  + A  + +++    +  +   YN ++  LC +     A
Sbjct: 278 GCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEA 337

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           + LL+ M       D +T+  L+D +C+ G ++  +++ E M +    P+++ Y ++ING
Sbjct: 338 EDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVING 397

Query: 509 LCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            CK+  +D A  LL+     G   + I+Y  ++ G     +  +A  + S M   G   N
Sbjct: 398 FCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPN 457

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V +N LINF+CK G  +QA EL+K M+++G  PD ++Y+T++    K    EE +EL +
Sbjct: 458 PVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 517

Query: 628 DMVLSGVSPDNQTYNAIISPLLGE 651
            M+  G++P+   Y+++ S L  E
Sbjct: 518 VMINKGITPNTIIYSSMASALSRE 541



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 3/296 (1%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A D++ ++  +   +    +N  +    +   + R  +L ++M+  G + +V T+  V
Sbjct: 335 EEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTV 394

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           I   CKE  ++EA+ L   M   G  PN + + +++   C+      A +L   M +  G
Sbjct: 395 INGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM-IQQG 453

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
              LPN VT N +IN  CK G VE A E+   M+  G   ++ +Y+T+IDG  + G +EE
Sbjct: 454 --CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 511

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           AL L + M+ +G+ PN ++Y+S    L  EG  +  + +   + D  +  D   Y+ +  
Sbjct: 512 ALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVIS 571

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            LC+     +A      ++    + +  +Y ILI  L     +  A+ LLS +  R
Sbjct: 572 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 7/365 (1%)

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I   C  GR   A     A+  AG    V  Y  +I GY R G   +            
Sbjct: 50  LIRSLCAAGRTADAAR---ALDTAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAAAVP 103

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           + PN   Y   +  L A G +  AL VL +M  +          ++ +  CR G  + A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +    +  +    D+ + N++++ +C+   +    +LL  +   G  PDI++Y  ++ G 
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-KSLLQASQRIGLLDA 533
           C     +   ++   M +V   PN+  +N++I  LC++   +   ++L Q  +     D 
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
             Y T+I+G   +G    A  + S M + G+  N V YN ++  LC    +++A +L+  
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
           M       D VT+  LV  F +N   + VIEL + M+  G  PD  TY  +I+    E  
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 654 AEDQV 658
            ++ V
Sbjct: 404 VDEAV 408



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 139/287 (48%), Gaps = 3/287 (1%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C      F+ LV    Q G  +   ++++++   G    +  +   ++   K   +  
Sbjct: 347 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE 406

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              L K M +CG   N  ++ +V+  LC+  +  +A  L   M++ G  PN V FN +IN
Sbjct: 407 AVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLIN 466

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G +E A++L ++M V   +   P+ ++++ +I+G  K G+ E A E+   MI  G
Sbjct: 467 FMCKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N   Y+++    +R G +++ +++ D +    +  +  +YN+ I  L    + + A+
Sbjct: 524 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAI 583

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
              + M+     P+  TY+IL +GL   G V++A  L +++     V
Sbjct: 584 DFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 630



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 20/243 (8%)

Query: 111 DDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           D+A++L+ N MSA    P         SY I      V   L RA   + A E    +IQ
Sbjct: 405 DEAVMLLKN-MSACGCKPNTI------SYTI------VLKGLCRAERWVDAQELISHMIQ 451

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           +    G   +   +N  ++ + K   + +  +L K+M+  G   ++ +++ VI  L K  
Sbjct: 452 Q----GCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 507

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K EEAL L   M+  GI PN + ++ + +   + G  +  +++F  +      +V  ++ 
Sbjct: 508 KTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI---QDATVRSDAA 564

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +N +I+  CK    + A +    M+  G   N  TY  LI G A  G   EA  L  E+
Sbjct: 565 LYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624

Query: 351 VKR 353
             R
Sbjct: 625 CSR 627


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/548 (24%), Positives = 262/548 (47%), Gaps = 33/548 (6%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           A+   + +++ A  + G  E A  V+ ++   G  +S+ A  + ++   K NE+G+   L
Sbjct: 308 ASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDL 367

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           +  M   G   +   F++++   CK  ++E+A+  Y RM    I P+ V  + +I    +
Sbjct: 368 FNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLK 427

Query: 264 VGDLEFALKLFRK-------------------------------MGVMSGDSVLPNSVTH 292
               E AL++F                                 + +M    + PN V +
Sbjct: 428 AESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++   C++  ++ A  I   M++ G++ N  TY+ LIDG+ +    + A  + ++M  
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI-DKHICPDHFTYSILTKGLCRNGCVK 411
                N V+YN+ I+ L   G    A  +L ++I +K       +Y+ +  G  + G   
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A + + ++ E     +  ++  LIN  CKSN +  A ++   M    L  D+  YG LI
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG+CK  +++ A  ++  + ++   PN+ +YNS+I+G      +DAA  L +     G+ 
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D  TY T+I+G   +G I  A  ++SE+ ++GI  +++ + +L+N L K G + +A ++
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           ++ M    + P+ + Y+T++    +  +  E   LHD+M+  G+  D+  +N ++S  + 
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847

Query: 651 EKSAEDQV 658
           +  A  ++
Sbjct: 848 KPPAASKI 855



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 270/616 (43%), Gaps = 42/616 (6%)

Query: 71  RKSPKLALEFYTWVGENNRFSHSLESSCAIVH-LLVNWRRFDDALLLMGNLMSAN-SVSP 128
           R  P  AL++  WV   +R     +    ++H LL +    D A  L+   +S N ++ P
Sbjct: 90  RNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIP 149

Query: 129 LEFLEGLLDSYEI--CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
              +  L+DS +    + TP  F+ L+ A  +    + A D    +  +     +   NN
Sbjct: 150 NVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNN 209

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            LS LV+ N I    ++Y +MV  G   +  T  L++ A  +E K EEA+ ++ R++  G
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P+ + F++ +  AC+  DL  AL L R+M    G  V  +  T+  +I  F K G +E
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLG--VPASQETYTSVIVAFVKEGNME 327

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A  +   M+  GI  +V    +L++GY +G    +AL L + M + GL P+ V+++  +
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG----------------------- 403
            W     ++E A+     M    I P       + +G                       
Sbjct: 388 EWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA 447

Query: 404 -----------LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
                       C+ G V  A      + ++ +  +   YN ++   C+  N+  A+ + 
Sbjct: 448 HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIF 507

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           S M+ +GL P+  TY  LIDG+ K  + + A  V   M     + N VIYN+IINGLCK 
Sbjct: 508 SEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKV 567

Query: 513 ASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
                AK +LQ    ++   +   +YN++I+G+   G    A   + EM   G + N V 
Sbjct: 568 GQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT 627

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +  LIN  CK      A E+   M    +  D   Y  L+  F K    +    L  ++ 
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687

Query: 631 LSGVSPDNQTYNAIIS 646
             G+ P+   YN++IS
Sbjct: 688 ELGLMPNVSVYNSLIS 703



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 201/417 (48%), Gaps = 3/417 (0%)

Query: 127 SPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           SP   LE   DS+E   A   + + +     + G  + A   ++ ++ KG   ++  +NN
Sbjct: 430 SPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    ++  +     ++ EM+  G   N  T++++I    K    + A  +  +M  S 
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
              N V +N IIN  C+VG    A ++ + +      S+  +  ++N II+GF K+G  +
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM--SCTSYNSIIDGFVKVGDTD 607

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A E    M + G   NV T+ +LI+G+ +    + AL +  EM    L  +   Y + I
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
                + D++ A  + S++ +  + P+   Y+ L  G    G +  A  L+ +++ + + 
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D ++Y  +I+ L K  N+  A  L S ++  G++PD I +  L++G  K G    A ++
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
            E MKK +  PN+++Y+++I G  ++ +L+ A  L       G++ D   +N L++G
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 220/500 (44%), Gaps = 11/500 (2%)

Query: 157 TQIGATEGAYDVIQKLKV----KGHSVSIHAWNNFLSHLVKLNEIGR-FWKLYKEMVSCG 211
           T    TE   D  + ++V    +   VS   + N++  L +L E G  FW L   ++S  
Sbjct: 68  TSTSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSI 127

Query: 212 YVENVNTFNLVIYALCKECKLEEAL--SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
           +  +  +  LV++       +   +  +L     + G       FN ++N   +   +++
Sbjct: 128 HTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDY 187

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+  F   G+M    V+P     N +++   +   ++ A+EI   M+  G+  +  T   
Sbjct: 188 AVDCF---GLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           L+    R    EEA+++   ++ RG  P+ ++++  +       D+  AL +L +M  K 
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304

Query: 390 ICP-DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
             P    TY+ +     + G +++A ++ ++++   +     +   L+N  CK N L  A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L + M   GL PD + +  +++ +CK   +E A++ Y  MK V   P+ V+ +++I G
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG 424

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
             K  S +AA  +   S    +      N +   +   GK+  A +    M   GI  N 
Sbjct: 425 CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V YN ++   C+      AR +   M+  G+ P+  TY+ L+  F KN   +   ++ + 
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544

Query: 629 MVLSGVSPDNQTYNAIISPL 648
           M  S    +   YN II+ L
Sbjct: 545 MNASNFEANEVIYNTIINGL 564


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 227/483 (46%), Gaps = 44/483 (9%)

Query: 114 LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
           L+L G   S   ++ ++  E +  S  +  AT   F  L+    + G    A+ + Q+  
Sbjct: 195 LVLHGLCKSGKVLAAMDHFEAVRRSMPVSAAT---FSILINGLVKAGMMIQAHSLAQETT 251

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
             G ++ IH +   ++ L K  +I     L +++ + G    + T+N ++  LCK  +LE
Sbjct: 252 TNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 311

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           EA+ L  +++ +G  P+VV +  +I+   +      A KLF++M   +   +  ++V + 
Sbjct: 312 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM---ASRGLALDTVCYT 368

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I G  + G++  A  +   M   G   +V T +T+IDG ++ G    A+R+   M  R
Sbjct: 369 ALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 428

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           GL PN VVY++ IH L     ++ AL +L+ M      PD  TY+IL  GLC++G V+ A
Sbjct: 429 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 488

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
               +++LE     D Y+YNILI+ LCK+ N  AA  +L  M     +     Y +L+DG
Sbjct: 489 RAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDG 543

Query: 474 YCKGGNIEGAVQVYENMKKV---------------------------------EKKPNLV 500
            CK G +EG   ++  M++                                  E  P+  
Sbjct: 544 LCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY 603

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            YNSII+ L K   ++  +++ Q   R    D +TYN L+NG     ++  A   + EM 
Sbjct: 604 AYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMT 663

Query: 561 NVG 563
             G
Sbjct: 664 GRG 666



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 264/582 (45%), Gaps = 32/582 (5%)

Query: 72  KSPKLALEFYTWVGENN-RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
           K   LA E +  +      F HS+ +  A++ +    +R  +A  L+ N ++      +E
Sbjct: 96  KDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVE 155

Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
               L+  Y + +     F A++R        E  + V   LK   H++ +H        
Sbjct: 156 TWNVLITGYCLAREPEEAF-AVIRE------MEEDFGVAPSLKT--HNLVLHGLCKSGKV 206

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L  ++          E V      +  TF+++I  L K   + +A SL      +G   +
Sbjct: 207 LAAMDHF--------EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTID 258

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           +  +  I+N   +   ++ A+ L  K+   + +   P   T+N ++NG CK+GR+E A +
Sbjct: 259 IHTYTAIVNWLAKNKKIQEAVALMEKI---TANGCTPTIATYNALLNGLCKMGRLEEAID 315

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   ++  G   +V TY +LIDG  +   S EA +L  EM  RGL  + V Y + I  L 
Sbjct: 316 LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL 375

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A  V   M      PD  T S +  GL + G +  A ++   +    +  +  
Sbjct: 376 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV 435

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            Y+ LI+ LCK+  +  A ++L+ M      PD ITY  LIDG CK G++E A   ++ M
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGK 548
            +   KP++  YN +I+GLCK  + DAA  +L   +S R        Y++L++G   +GK
Sbjct: 496 LEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR------FVYSSLVDGLCKSGK 549

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           +     +F EM   G+A N      LI  LCK     +A  L   +   G +P    Y +
Sbjct: 550 LEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNS 607

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
           +++   K+    E   ++ +M      PD  TYNA+++ ++G
Sbjct: 608 IISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIG 648



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 239/500 (47%), Gaps = 14/500 (2%)

Query: 150 DALVRACTQIGATEGAYDVIQKLKVK--GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           DA+V+    +   + A+++ Q L     G   S+H  N  L    +         L K  
Sbjct: 86  DAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNE 145

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFNMIINEACQVGD 266
           ++  +  +V T+N++I   C   + EEA ++   M +  G+ P++   N++++  C+ G 
Sbjct: 146 LATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGK 205

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A+  F  +      S+  ++ T + +ING  K G +  A  +       G   ++ T
Sbjct: 206 VLAAMDHFEAV----RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHT 261

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  +++  A+    +EA+ L +++   G  P    YN+ ++ L   G +E A+ +L  ++
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 321

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           D    PD  TY+ L  GL +     +A+KL  ++    +  D   Y  LI  L ++  + 
Sbjct: 322 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIP 381

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  +  +M   G +PD++T  T+IDG  K G I  AV+++++M+     PN V+Y+++I
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 441

Query: 507 NGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GLCK   +D A  +L Q  +     D ITYN LI+G   +G +  A A F EM   G  
Sbjct: 442 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 501

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   YNILI+ LCK G    A       +L  +      Y++LV    K+   E    L
Sbjct: 502 PDVYTYNILISGLCKAGNTDAA-----CGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCML 556

Query: 626 HDDMVLSGVSPDNQTYNAII 645
             +M  SGV+ ++QT   +I
Sbjct: 557 FHEMERSGVA-NSQTRTRLI 575



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 179/445 (40%), Gaps = 92/445 (20%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
           AIV+ L   ++  +A+ LM  + +AN  +P                T A ++AL+    +
Sbjct: 264 AIVNWLAKNKKIQEAVALMEKI-TANGCTP----------------TIATYNALLNGLCK 306

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           +G  E A D+++K+   G +  +  + + +  L K       +KL+KEM S G   +   
Sbjct: 307 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVC 366

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +  +I  L +  K+ +A S+Y  M   G  P+VV  + +I+   + G +  A+++F+ M 
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM- 425

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 + PN V ++ +I+G CK  +++ A E+   M KA    +  TY  LIDG  + G
Sbjct: 426 --EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG 483

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E A    DEM++ G  P+   YN  I  L   G+ + A  VL DM         F YS
Sbjct: 484 DVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYS 538

Query: 399 ILTKGLCRN-----GC-----------------------------VKQAFKLHNQVLEEH 424
            L  GLC++     GC                             V +A  L N + +E 
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 598

Query: 425 MV---------------------------------GDAYSYNILINYLCKSNNLAAAKQL 451
           M                                   D  +YN L+N +  +N +  A   
Sbjct: 599 MPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAHYY 658

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCK 476
              M  RG +P +     L D   K
Sbjct: 659 YLEMTGRGYVPPVSILHKLADDRLK 683



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 1/226 (0%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
           ++ N L++   ++     A  LL + +     PD+ T+  LI GYC     E A  V   
Sbjct: 120 HTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIRE 179

Query: 490 MKK-VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGK 548
           M++     P+L  +N +++GLCK   + AA    +A +R   + A T++ LING    G 
Sbjct: 180 MEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGM 239

Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
           + +A ++  E    G  ++   Y  ++N+L K    Q+A  LM+ +  +G  P   TY  
Sbjct: 240 MIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNA 299

Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           L+    K    EE I+L   +V +G +PD  TY ++I  L  EK +
Sbjct: 300 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 345


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 217/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++     + 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  K     V        + HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E +  GY  ++  FN+++++  KE ++  A S++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 ESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  ++E A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  +  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 36/314 (11%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ F K G +  A+ +  A+ K G+  +V ++ TL++GY + G  +E  RL + M  
Sbjct: 140 NILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  +E A  +  +M++  + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A+ L   M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLLQASQRIGLL 531
           G CK G++E A +  + M K   + + V Y ++I+GLC++  S+DA K            
Sbjct: 320 GSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK------------ 367

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
                                  M  EM +VG+      Y ++IN  CK G      +L+
Sbjct: 368 -----------------------MLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404

Query: 592 KVMILHGIIPDYVT 605
           K M   G +P  VT
Sbjct: 405 KEMQRDGYVPSVVT 418



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E ++ G   +   +N  +H    EG++  A  V   +    + P   +++ L  G  + 
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L N +    +  D Y+Y++LIN LCK + +  A +L   M+  GL+P+ +T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A+ L      
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G    
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           A ++++ M+  G+ P+  TYT ++  F K        +L  +M   G  P
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    +P++  Y+ +INGLCK++ ++ A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L   M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ PD+ TY  LI+G CK   +E A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 1/254 (0%)

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D + +S L      +G ++ A + +    E        +   +I +L K           
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFY 124

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
              +  G    +  +  L+  + K G I  A  V++ + K   +P++V +N+++NG  K 
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
             LD    L  A Q  G+  D  TY+ LING     K+ +A  +F EM N G+  N V +
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244

Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
             LI+  CK G    A E+ K M+   + PD +TY TL+    K    ++  +L D+M +
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304

Query: 632 SGVSPDNQTYNAII 645
            G+ PD  TY  +I
Sbjct: 305 KGLKPDKITYTTLI 318


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/635 (24%), Positives = 279/635 (43%), Gaps = 56/635 (8%)

Query: 63  VNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNW---RRFDDALL-LMG 118
           V + +     +P  AL F+T +  +  FSH++ +  AI+ +L  W   R+ D   L L+ 
Sbjct: 70  VLQTLHHLHNNPSHALSFFTHL-RHTGFSHTISTYAAIIKILSFWNLQRQLDTLFLHLIN 128

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATP----AVFDALVRACTQIGATEGAYDVIQKLKV 174
                     L   E L   +             F+  V+ C  +   + A D + + + 
Sbjct: 129 RDHPPLPFPLLNLFETLFQDFNTSHKNNYFLLRAFNGFVKTCVSLNMFDKAIDFLFQTRR 188

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +G    +   N   + LV+  E+ +   +Y+++   G++ N  T+ +VI ALCK+  L++
Sbjct: 189 RGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQ 248

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEAC--QVGDLEF-ALKLFRKMGVMSGDSVLPNSVT 291
            L ++  M + G+ P+  CF   I   C     DL +  L+ FRK     G++ L     
Sbjct: 249 PLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRK-----GNAPL-EVYA 302

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +  ++ GFC   +++ A+ +   M + G+  +V  Y++LI GY +  +   AL L DEM+
Sbjct: 303 YTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMI 362

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
            RG+  N VV +  +H L   G     +    ++ +  +  D   Y+I+   LC  G V+
Sbjct: 363 SRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVE 422

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A ++  ++  + +  D   Y  LIN  C   +L  A  +   M  +GL PDI+TY  L 
Sbjct: 423 DAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLA 482

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
            G  + G+    V++ + M+    KPN   +  II GLC    +  A+    + +   + 
Sbjct: 483 AGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIE 542

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG---------------------------- 563
               Y+ ++NGY     + +++ +F ++ N G                            
Sbjct: 543 ---IYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLL 599

Query: 564 -------IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
                  +  +K+ Y+ ++  LC+ G  + AR L  V +  G  PD VTYT ++  + + 
Sbjct: 600 DRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRM 659

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
              +E  +L  DM   G+ PD  T+  ++   L E
Sbjct: 660 NCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKE 694



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 245/524 (46%), Gaps = 21/524 (4%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F A +        ++  Y+V+Q  +     + ++A+   +       ++     ++ +M 
Sbjct: 268 FAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDME 327

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G V +V  ++ +I+  CK   L  AL+L+  M+  G+  N V  + I++  C +G++ 
Sbjct: 328 RQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILH--C-LGEMG 384

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
             L++  +   +    +  + V +N + +  C LG+VE A E+   M    +  +V+ Y 
Sbjct: 385 MTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYT 444

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI+GY   G    A  +  EM ++GL P+ V YN     L   G     + +L  M  +
Sbjct: 445 TLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQ 504

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+  T+ ++ +GLC  G V +A    N + ++++      Y+ ++N  C+++ +  +
Sbjct: 505 GMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNI----EIYSAMVNGYCETDLVKKS 560

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            ++   ++ +G +    +   L+   C  G+IE AV++ + M     +P+ ++Y+ I+  
Sbjct: 561 YEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAA 620

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC+   +  A++L       G   D +TY  +IN Y     + EA  +F +M+  GI  +
Sbjct: 621 LCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPD 680

Query: 568 KVGYNILIN-----FLCKFGCYQQARE--------LMKVMILHGIIPDYVTYTTLVTRFS 614
            + + +L++     +L K       R+        +++ M    I PD V YT L+    
Sbjct: 681 VITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHM 740

Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           K  + ++ + L D M+ SG+ PD  TY A++S L      E  V
Sbjct: 741 KTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAV 784



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 243/512 (47%), Gaps = 25/512 (4%)

Query: 149 FDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           + A+VR  C ++   E A  V   ++ +G    ++ +++ +    K + + R   L+ EM
Sbjct: 303 YTAVVRGFCNEMKLDE-AQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEM 361

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           +S G   N    + +++ L +     E +  +  + +SG++ + V +N++ +  C +G +
Sbjct: 362 ISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKV 421

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTH-NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           E A+++  +M        L   V H   +ING+C  G +  A  +   M + G+  ++ T
Sbjct: 422 EDAVEMVEEMK----SKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVT 477

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L  G +R G + E ++L D M  +G+ PN+  +   I  L + G V  A    + + 
Sbjct: 478 YNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLE 537

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           DK+I      YS +  G C    VK+++++  ++L +  +    S   L++ LC + ++ 
Sbjct: 538 DKNI----EIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIE 593

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +LL  M++  + P  I Y  ++   C+ G+++ A  +++        P++V Y  +I
Sbjct: 594 KAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMI 653

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING---------YFINGKIAEA---- 552
           N  C+   L  A  L Q  +R G+  D IT+  L++G         +  +GK        
Sbjct: 654 NSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYV 713

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  +M  + I  + V Y +L++   K   +QQA  L   MI  G+ PD +TYT LV+ 
Sbjct: 714 STILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSG 773

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
                  E+ + L ++M   G++PD    +A+
Sbjct: 774 LCNRGHVEKAVTLLNEMSSKGMTPDVHIISAL 805



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 196/437 (44%), Gaps = 21/437 (4%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           K    V   ++    ++G T    D  ++LK  G  +   A+N     L  L ++    +
Sbjct: 367 KTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVE 426

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           + +EM S     +V  +  +I   C +  L  A +++  M + G+ P++V +N++     
Sbjct: 427 MVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLS 486

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G     +KL   +  M    + PNS TH  II G C  G+V    E+ +  ++   D 
Sbjct: 487 RNGHARETVKL---LDFMESQGMKPNSTTHKMIIEGLCSGGKV-LEAEVYFNSLE---DK 539

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N+  Y+ +++GY      +++  +  +++ +G M         +  L   GD+E A+ +L
Sbjct: 540 NIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLL 599

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+  ++ P    YS +   LC+ G +K A  L +  +      D  +Y I+IN  C+ 
Sbjct: 600 DRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRM 659

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK---GGNIEG----------AVQVYEN 489
           N L  A  L   M  RG+ PD+IT+  L+DG  K   G                  +  +
Sbjct: 660 NCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRD 719

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
           M++++  P++V Y  +++G  K  +   A SL       GL  D ITY  L++G    G 
Sbjct: 720 MEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGH 779

Query: 549 IAEAFAMFSEMRNVGIA 565
           + +A  + +EM + G+ 
Sbjct: 780 VEKAVTLLNEMSSKGMT 796



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 173/374 (46%), Gaps = 18/374 (4%)

Query: 297 NGFCK----LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           NGF K    L   + A +  +   + GI  +V T   L +     G  ++AL + +++ +
Sbjct: 164 NGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKR 223

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC--- 409
            G +PN   Y   I  L  +GD++  L V  +M    + P  + ++   +GLC N     
Sbjct: 224 FGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDL 283

Query: 410 ---VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
              V QAF+  N  LE       Y+Y  ++   C    L  A+ +   M  +G++PD+  
Sbjct: 284 GYEVLQAFRKGNAPLE------VYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYV 337

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQAS 525
           Y +LI GYCK  N+  A+ +++ M     K N V+ + I++ L +   +L+      +  
Sbjct: 338 YSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELK 397

Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           +    LD + YN + +   + GK+ +A  M  EM++  + ++   Y  LIN  C  G   
Sbjct: 398 ESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLV 457

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  + K M   G+ PD VTY  L    S+N    E ++L D M   G+ P++ T+  II
Sbjct: 458 TAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMII 517

Query: 646 SPLL-GEKSAEDQV 658
             L  G K  E +V
Sbjct: 518 EGLCSGGKVLEAEV 531



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 157/371 (42%), Gaps = 50/371 (13%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C Q G    A+++ +++K KG    I  +N   + L +        KL   M S G   N
Sbjct: 451 CLQ-GDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPN 509

Query: 216 VNTFNLVIYALCKECKLEEA-------------------------------LSLYYRMLK 244
             T  ++I  LC   K+ EA                                 ++ ++L 
Sbjct: 510 STTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLN 569

Query: 245 SG-IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
            G +     CF ++ ++ C  GD+E A+KL  +M +    +V P+ + ++ I+   C+ G
Sbjct: 570 QGDMAKKASCFKLL-SKLCMTGDIEKAVKLLDRMLL---SNVEPSKIMYSKILAALCQAG 625

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
            ++ A  +    +  G   +V TY  +I+ Y R    +EA  L  +M +RG+ P+ + + 
Sbjct: 626 DMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFT 685

Query: 364 -----STIHWLFAEGDVEG-----ALFV---LSDMIDKHICPDHFTYSILTKGLCRNGCV 410
                S   +L       G     +L+V   L DM    I PD   Y++L  G  +    
Sbjct: 686 VLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNF 745

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           +QA  L ++++E  +  D  +Y  L++ LC   ++  A  LL+ M  +G+ PD+     L
Sbjct: 746 QQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISAL 805

Query: 471 IDGYCKGGNIE 481
             G  K   ++
Sbjct: 806 KRGIIKARKVQ 816



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 142/309 (45%), Gaps = 26/309 (8%)

Query: 121 MSANSVSPLEFLEGLLDSYEICKATP----------AVFDALVRACTQIGATEGAYDVIQ 170
           M  NS +    +EGL    ++ +A             ++ A+V    +    + +Y+V  
Sbjct: 506 MKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFL 565

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           KL  +G      +    LS L    +I +  KL   M+      +   ++ ++ ALC+  
Sbjct: 566 KLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAG 625

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
            ++ A +L+   +  G  P+VV + ++IN  C++  L+ A  LF+ M       + P+ +
Sbjct: 626 DMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDM---KRRGIKPDVI 682

Query: 291 THNCIING---------FCKLGRVE----FAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
           T   +++G         F   G+ +    +   I   M +  I+ +V  Y  L+DG+ + 
Sbjct: 683 TFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKT 742

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
            + ++A+ L D+M++ GL P+ + Y + +  L   G VE A+ +L++M  K + PD    
Sbjct: 743 DNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHII 802

Query: 398 SILTKGLCR 406
           S L +G+ +
Sbjct: 803 SALKRGIIK 811


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 188/349 (53%), Gaps = 4/349 (1%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y +++  G       FN+++  L +  +L  A +++  M   G+   VV FN +I+  C+
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            GDL+ A  L R+M   S   V P+  T+  +I G C++GR+E A  +   M   G+  N
Sbjct: 288 AGDLDGAETLHRRM---SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 344

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
              +  LID + + G +E  L L  EM +RG+ P+ V YN+ ++ L    D++ A  ++ 
Sbjct: 345 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 404

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M    + PD  TY+ L  G C+   +  A ++   ++ E +  D  +Y  LI+ L K+ 
Sbjct: 405 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 464

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
             A A+++L  M+  GL PD  TY  +ID +C+ G+++  +++ + M+   +KP +V YN
Sbjct: 465 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 524

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
            I+NG CK   +  A  LL A   IG+  D ITYN L++G+  +GK+ +
Sbjct: 525 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 573



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 4/370 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P +   N ++    +LG +  A+ +   M   G+   V ++ T+I G  R G  + A  L
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 297

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M + G+ P+   Y + I  L   G +E A  V   M  + + P+   ++IL    C+
Sbjct: 298 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 357

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G  +   +LH ++ E  +  DA +YN ++N LC++ +L +A  ++  M   GL PD +T
Sbjct: 358 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 417

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDGYCK   ++ A+++ +NM       + V Y ++I+GL K      A+ +L    
Sbjct: 418 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 477

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             GL  D  TY  +I+ +   G +     +  EM+N G     V YN+++N  CK G  +
Sbjct: 478 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 537

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  L+  MI  G+ PD +TY  L      +C   +V ++ +     G  PD   Y +I+
Sbjct: 538 NADMLLNAMINIGVSPDDITYNIL---LDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIV 594

Query: 646 SPLLGEKSAE 655
             ++ +K+ +
Sbjct: 595 GEIVKKKTTK 604



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 183/370 (49%), Gaps = 6/370 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +  LV+L E+     ++ EM S G    V +FN +I  +C+   L+ A +L+ RM 
Sbjct: 243 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 302

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++G+ P+V  +  +I   C+VG +E A  +F KM    G  + PN+V    +I+  CK G
Sbjct: 303 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM---CGRGMKPNAVVFTILIDAHCKKG 359

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             E   E+   M + G+  +  TY  +++G  R    + A  +  EM   GL P+ V Y 
Sbjct: 360 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 419

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I     E +++ A+ +  +M+ + +  D  TY+ L  GL + G    A ++  +++E 
Sbjct: 420 TLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEA 479

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D  +Y ++I+  C+  ++    +LL  M  +G  P ++TY  +++G+CK G ++ A
Sbjct: 480 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 539

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGY 543
             +   M  +   P+ + YN +++G CK   +   + L  A    G +  +   T I G 
Sbjct: 540 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAK---GTVPDLGVYTSIVGE 596

Query: 544 FINGKIAEAF 553
            +  K  + +
Sbjct: 597 IVKKKTTKTY 606



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 168/333 (50%), Gaps = 3/333 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           ++ AG+    + +  L+    R G    A  + DEM  RG+    V +N+ I  +   GD
Sbjct: 231 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 290

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++GA  +   M +  + PD +TY  L +GLCR G ++ A  +  ++    M  +A  + I
Sbjct: 291 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 350

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK  +     +L   M  RG+ PD +TY  +++G C+  +++ A  +   M+   
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEA 552
            +P+ V Y ++I+G CK+  LD A  + Q   ++ +GL D +TY  LI+G    G+ A+A
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL-DEVTYTALISGLSKAGRSADA 469

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  EM   G+  +   Y ++I+  C+ G  +    L+K M   G  P  VTY  ++  
Sbjct: 470 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 529

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           F K    +    L + M+  GVSPD+ TYN ++
Sbjct: 530 FCKLGQMKNADMLLNAMINIGVSPDDITYNILL 562



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 1/313 (0%)

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           +R  ++ EA     +++  GL P   ++N  +  L   G++  A  V  +M  + +    
Sbjct: 216 SRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTV 275

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            +++ +  G+CR G +  A  LH ++ E  +  D Y+Y  LI  LC+   +  A+ +   
Sbjct: 276 VSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEK 335

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  RG+ P+ + +  LID +CK G+ E  ++++  M++   +P+ V YN+I+NGLC+   
Sbjct: 336 MCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARD 395

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L +A  ++   +  GL  D +TY TLI+GY    ++  A  +   M   G+ +++V Y  
Sbjct: 396 LKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 455

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ L K G    A  ++  M+  G+ PD  TYT ++  F +    +  + L  +M   G
Sbjct: 456 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 515

Query: 634 VSPDNQTYNAIIS 646
             P   TYN I++
Sbjct: 516 RKPGVVTYNVIMN 528



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 128/246 (52%), Gaps = 1/246 (0%)

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           + R     +A   + Q+L+  +  +A  +N+L+  L +   LA+A+ +   M  RG+   
Sbjct: 215 MSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRT 274

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++++ T+I G C+ G+++GA  ++  M +    P++  Y ++I GLC+   ++ A+ + +
Sbjct: 275 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 334

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G+  +A+ +  LI+ +   G       +  EMR  G+  + V YN ++N LC+  
Sbjct: 335 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 394

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             + A  ++  M   G+ PD VTYTTL+  + K    +  +E+  +MV  GV  D  TY 
Sbjct: 395 DLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYT 454

Query: 643 AIISPL 648
           A+IS L
Sbjct: 455 ALISGL 460



 Score = 42.4 bits (98), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 49/106 (46%)

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
           EA A + ++ + G+      +N+L+  L + G    A+ +   M   G+    V++ T++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           +   +    +    LH  M  +GV+PD  TY A+I  L      ED
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIED 328


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 272/588 (46%), Gaps = 18/588 (3%)

Query: 45  QRKWKILE-QMAPSLTNSLVNRVVSEFRKSPKLA----LEFYTWVGE-NNRFSHSLESSC 98
           +R W I + Q  PSL  +L + V       P LA    ++F+ ++ E  +     L +  
Sbjct: 23  RRAWWIGKLQSNPSLLFNLNSNVTRLVLSDPSLATQSCIDFFKFLREFESNLKPDLTAVV 82

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVS-PLEFL-EGLLD---SYEICKATPAVFDALV 153
            + H L + RRF +  LL+ ++++      P+E L   ++D   S E  +     FD + 
Sbjct: 83  TLSHRLYSNRRFSEMRLLLNSVVNDGFYERPVEGLGSAMVDCDISEEKFEFWEKFFDLVF 142

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
           R     G  E    V   +  KG S+   +   FL    K   I    + ++ MV  G  
Sbjct: 143 RVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVK 202

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
             V +  +V+  LC+  ++E++  L       GI P    +N IIN   +  D     K+
Sbjct: 203 ITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKI 262

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            +   VM  D V+ N VT+  +I    K G++   E++   M + GI+ ++  Y +LI  
Sbjct: 263 LK---VMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISW 319

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             R G+ + A  L DE+ ++GL+P++  Y + I  +   G++  A  ++++M  K +   
Sbjct: 320 NCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 379

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
              ++ L  G CR G + +A  +++ + ++    D ++ N + +   +      AKQ L 
Sbjct: 380 QVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 439

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            M+  G+    ++Y  LID YCK GN+E A +++  M   E +PN + YN +I   CK  
Sbjct: 440 RMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQG 499

Query: 514 SLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
            +  A+ L    +  G+  D+ TY +LI+G  I   + EA  +FSEM   G+  N V Y 
Sbjct: 500 KVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 559

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           ++I+ L K G   +A  L   +   G   D   YT L+       SPE
Sbjct: 560 VMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSMH---SPE 604



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 162/327 (49%), Gaps = 7/327 (2%)

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD---VEGALFVLSDMIDKHI 390
           Y   G  EE LR+ D MVK+GL   ++   S I +L A      ++  L     M+D  +
Sbjct: 145 YVDNGMFEEGLRVFDYMVKKGL---SIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGV 201

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
               ++ +I+ +GLCR G V+++ KL  +   + +  +AY+YN +IN   K  + +  ++
Sbjct: 202 KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEK 261

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +L  M   G++ + +TY  LI+   K G +    ++++ M++   + ++ +Y S+I+  C
Sbjct: 262 ILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNC 321

Query: 511 KDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           +  ++  A  L       GLL  + TY  LI+G    G++  A  + +EM++ G+ + +V
Sbjct: 322 RKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 381

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
            +N LIN  C+ G   +A  +  VM   G   D  T  T+ + F++    +E  +    M
Sbjct: 382 VFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 441

Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
           +  GV     +Y  +I     E + E+
Sbjct: 442 MEGGVRLSTVSYTNLIDVYCKEGNVEE 468


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 215/463 (46%), Gaps = 8/463 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +  L +  ++    +    MV  G+  +  TFN +I   C+  +L+ A  L+ +M 
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G   + V +  +I   C+ G ++ AL+LFR++         P+  TH  ++ G C   
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ-------PDMYTHAALVKGLCDAR 244

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R E    +   M + G     R YA L+D + R   +EEA ++ +EM   GL+P  V   
Sbjct: 245 RGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCT 304

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + ++    EG + GA+ V   M  K   P+ +TY+ + +G C  G V +A  L +Q+ E 
Sbjct: 305 AVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMREC 364

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D  +YN+LI   C   ++ +A +LL  M   GL  D  TY  LID  CK G ++ A
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
             +++ ++    +PN V +N++INGLCK    D A + L+     G   D  TY+  I  
Sbjct: 425 CSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIEN 484

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
                   E  +   EM    +  + V Y I+I+ L K   Y  A  +   M+  G  PD
Sbjct: 485 LCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPD 544

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            VTYTT V  +       E   +  +M   G+  D   YN +I
Sbjct: 545 VVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 183/371 (49%), Gaps = 5/371 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P   T+N +I   C+   +  A+     M+++G   +  T+ +LI GY R    + A  L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D+M  RG   + V Y + I      G V+ AL +  ++      PD +T++ L KGLC 
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
               ++   +  ++ E        +Y  L++  C+      A+++L+ M   GL+P  +T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
              +++ YC+ G + GAV+V+E+MK    +PN+  YN+++ G C    +  A +LL   +
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D +TYN LI G  I+G I  AF +   M   G+A ++  YN+LI+ LCK G   
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  L   +   GI P+ VT+ T++    K    +      + MV +G +PD  TY+  I
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 646 SPLLGEKSAED 656
             L   K + +
Sbjct: 483 ENLCKTKGSRE 493



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 144/614 (23%), Positives = 251/614 (40%), Gaps = 76/614 (12%)

Query: 90  FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
           FS    S  A++       R D+AL L   L   +  +    ++GL D+           
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARR--------- 245

Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
                        EG Y ++QK+K  G   +  A+   +    +  +     K+  EM  
Sbjct: 246 -----------GEEGLY-MLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFD 293

Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
            G V    T   V+ A C+E ++  A+ ++  M   G  PNV  +N ++   C VG +  
Sbjct: 294 NGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYK 353

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           A+ L  +M       V P+ VT+N +I G C  G +E A  +   M   G+  +  TY  
Sbjct: 354 AMALLDQMRECG---VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNV 410

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           LID   + G  +EA  L D +  RG+ PN+V +N+ I+ L   G  + A   L  M+   
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
             PD +TYS   + LC+    ++     +++L++ +     +Y I+I+ L K  N   A 
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLAT 530

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           ++   M+  G  PD++TY T +  YC  G +  A  V   MKK     + + YN++I+G 
Sbjct: 531 RIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGH 590

Query: 510 CKDASLDAAKSLLQ-------------------------ASQRIGLLDAITYNTL----- 539
                 D A ++L+                          ++ + L     + T+     
Sbjct: 591 TSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADV 650

Query: 540 ----------------------INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
                                 + G+    ++ E  ++ S M+   + +N+  Y  L+N 
Sbjct: 651 FELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNC 710

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            CK   Y  A  L+  MI HG +P+ ++Y  L++ F+     +   E+   +     + D
Sbjct: 711 FCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTD 770

Query: 638 NQTYNAIISPLLGE 651
              +  II  L+ +
Sbjct: 771 EIVWKIIIDGLIRQ 784



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/443 (22%), Positives = 175/443 (39%), Gaps = 58/443 (13%)

Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
            LLD    C   P V  ++ L+R     G  E A+ +++ ++  G +   + +N  +  L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K  ++     L+  +   G   N  TFN VI  LCK  K + A +   +M+ +G  P+ 
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDT 475

Query: 252 VCFNMIINEACQVGDLEFALKLFRKM--------------------------------GV 279
             ++  I   C+       L    +M                                G 
Sbjct: 476 YTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQ 535

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M      P+ VT+   +  +C  GR+  AE +   M K GI  +   Y TLIDG+   G 
Sbjct: 536 MVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGK 595

Query: 340 SEEALRLCDEMVKRGLMPNNVVY------------------NSTIHWLFAE-GDVEGALF 380
           ++ A+ +   M     MPN+  +                   +T  W   E  DV    F
Sbjct: 596 TDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADV----F 651

Query: 381 VLSDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            L +++ K+  P     Y  + +G      + +   L + + E+ +  +   Y  L+N  
Sbjct: 652 ELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCF 711

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK      A  LL SMI  G +P++I+Y  L+ G+   G  + A +++  ++  E   + 
Sbjct: 712 CKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDE 771

Query: 500 VIYNSIINGLCKDASLDAAKSLL 522
           +++  II+GL +    D    ++
Sbjct: 772 IVWKIIIDGLIRQGHPDMCHDMI 794



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 55/279 (19%), Positives = 104/279 (37%), Gaps = 19/279 (6%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      +   VRA    G    A +V+ ++K  G  V   A+N  +     + +     
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAV 600

Query: 202 KLYKEMVSCGYVENVNTF----------------NLVIYALCKECKLEEALSLYYRMLKS 245
            + K M     + N  TF                 L   ++ K  +L +   L+  M K+
Sbjct: 601 TILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKN 660

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
            +  +   +  I+    +   L+    L   M     D +  N   +  ++N FCKL   
Sbjct: 661 SVPSSARAYLAILEGFSEERRLDEVTSLVSHM---KEDDLPLNEDIYTSLVNCFCKLRMY 717

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +  +MI  G   N+ +Y  L+ G+   G ++ A  +   +  +    + +V+   
Sbjct: 718 PDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKII 777

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           I  L  +G  +    ++S +      P   TY++LT+ L
Sbjct: 778 IDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816


>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/517 (24%), Positives = 261/517 (50%), Gaps = 6/517 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T  V+ +L+ A       E A   ++K+K +G  +S+  ++  +    K+ +      
Sbjct: 321 EPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADH 380

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            +KE        N   +  +IYA C+ C + +A +L   M + GI   +  ++ +++   
Sbjct: 381 WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYT 440

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            +G+ E  L +F ++         P+ +++ C+IN + K+G+V  A E+   M  AGI  
Sbjct: 441 IIGNEEKCLIVFDRLKECG---FTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKH 497

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N++TY+ LI+G+ R      A  + +++VK GL P+ V+YN+ I      G+++ A+  +
Sbjct: 498 NMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTV 557

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  +   P   T+  +  G  R+G +++A ++ + +     +   +++N LI  L + 
Sbjct: 558 KEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEK 617

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A ++L  M + G+ P+  TY T++ GY   G+   A + +  +K    + ++  Y
Sbjct: 618 CQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTY 677

Query: 503 NSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            +++   CK   + +A ++ +  +SQ+I   +   YN LI+G+   G + EA  +  +M+
Sbjct: 678 EALLKACCKSGRMQSALAVTREMSSQKIPR-NTFVYNILIDGWARRGDVWEAAELMQQMK 736

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  +   Y   IN  CK G  Q+A + ++ M + G+ P+  TYTTL+  +++   PE
Sbjct: 737 QEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPE 796

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           + ++   +M  +G+ PD   Y+ +++ LL   S  ++
Sbjct: 797 KALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 833



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 187/383 (48%), Gaps = 5/383 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           + D  + C  TP+V  +  L+    +IG    A +V + ++V G   ++  ++  ++  V
Sbjct: 451 VFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFV 510

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +L +    + +++++V  G   +V  +N +I A C    ++ A+     M K    P   
Sbjct: 511 RLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTR 570

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            F  II+   + GD+  AL++F    +M     +P   T N +I G  +  ++E A EI 
Sbjct: 571 TFMPIIHGFARSGDMRRALEIF---DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEIL 627

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M  AGI  N  TY T++ GYA  G + +A     ++   GL  +   Y + +      
Sbjct: 628 DEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKS 687

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G ++ AL V  +M  + I  + F Y+IL  G  R G V +A +L  Q+ +E +  D ++Y
Sbjct: 688 GRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTY 747

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              IN  CK+ ++  A + +  M V G+ P+I TY TLI G+ +    E A++ ++ MK 
Sbjct: 748 TSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKS 807

Query: 493 VEKKPNLVIYNSIINGLCKDASL 515
              KP+  +Y+ ++  L   AS+
Sbjct: 808 AGLKPDKAVYHCLMTSLLSRASV 830



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 206/444 (46%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           ++ M + G     + +  +I+A      +EEALS   +M + GI  ++V +++++    +
Sbjct: 312 FESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAK 371

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           + D E A   F++       + L N++ +  II   C+   +  AE +   M + GID  
Sbjct: 372 IADAEAADHWFKE--AKERHTTL-NAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAP 428

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           +  Y T++DGY   G+ E+ L + D + + G  P+ + Y   I+     G V  AL V  
Sbjct: 429 IDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSK 488

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            M    I  +  TYS+L  G  R      AF +   V+++ +  D   YN +I   C   
Sbjct: 489 MMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMG 548

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N+  A + +  M      P   T+  +I G+ + G++  A+++++ M+     P +  +N
Sbjct: 549 NMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFN 608

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I GL +   ++ A  +L      G+  +  TY T+++GY   G   +AF  F++++  
Sbjct: 609 ALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTE 668

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+ ++   Y  L+   CK G  Q A  + + M    I  +   Y  L+  +++     E 
Sbjct: 669 GLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEA 728

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            EL   M   GV PD  TY + I+
Sbjct: 729 AELMQQMKQEGVQPDIHTYTSFIN 752



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 157/357 (43%), Gaps = 36/357 (10%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           + +  ++  YAR G    A    + M  RG+ P + VY S IH      D+E AL  +  
Sbjct: 290 KEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRK 349

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M ++ I     TYSIL  G  +    + A     +  E H   +A  Y  +I   C++ N
Sbjct: 350 MKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACN 409

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ L+  M   G+   I  Y T++DGY   GN E  + V++ +K+    P+++ Y  
Sbjct: 410 MTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGC 469

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN   K   +  A  + +  +  G+   + TY+ LING+      A AFA+F ++   G
Sbjct: 470 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 529

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVM--------------ILHGI---------- 599
           +  + V YN +I   C  G   +A   +K M              I+HG           
Sbjct: 530 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 589

Query: 600 -----------IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                      IP   T+  L+    + C  E+ +E+ D+M L+G+SP+  TY  I+
Sbjct: 590 EIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 646



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 32/299 (10%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +++ ++RA   +G  + A   +++++ + H  +   +   +    +  ++ R  +++  M
Sbjct: 536 LYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMM 595

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G +  V+TFN +I  L ++C++E+A+ +   M  +GI PN   +  I++    +GD 
Sbjct: 596 RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDT 655

Query: 268 EFALKLFRKMGV--------------------------------MSGDSVLPNSVTHNCI 295
             A + F K+                                  MS   +  N+  +N +
Sbjct: 656 GKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNIL 715

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+G+ + G V  A E+   M + G+  ++ TY + I+   + G  + A +   EM   G+
Sbjct: 716 IDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGV 775

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
            PN   Y + IH        E AL    +M    + PD   Y  L   L     V + +
Sbjct: 776 KPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEY 834



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 1/260 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P    + ++     R G +  A      +    +   ++ Y  LI+      ++  A   
Sbjct: 287 PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 346

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M   G+   ++TY  L+ G+ K  + E A   ++  K+     N +IY +II   C+
Sbjct: 347 VRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQ 406

Query: 512 DASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             ++  A++L++  +  G+   I  Y+T+++GY I G   +   +F  ++  G   + + 
Sbjct: 407 ACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVIS 466

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LIN   K G   +A E+ K+M + GI  +  TY+ L+  F +         + +D+V
Sbjct: 467 YGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVV 526

Query: 631 LSGVSPDNQTYNAIISPLLG 650
             G+ PD   YN II    G
Sbjct: 527 KDGLKPDVVLYNNIIRAFCG 546


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 252/565 (44%), Gaps = 38/565 (6%)

Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
           LM   +++    L  LL      ++   + DA VRA     A      +      +  + 
Sbjct: 97  LMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAP 156

Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
           ++  +N  L  L    ++ R   L+  +   G   +  T++ ++  L K  +L+ AL L 
Sbjct: 157 NLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLL 216

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M   G+  + VC+N +++   + G  E A+K++ ++    G S  PN  T+  +++G 
Sbjct: 217 DEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGAS--PNLATYKVMLDGL 274

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CKLGR + A E+   M+      +  TY  LI G  R G  + A R+  +MVK GL+ + 
Sbjct: 275 CKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDV 334

Query: 360 VVYNSTIH-----------WLFAE-----------------------GDVEGALFVLSDM 385
            VYNS I            W F +                       G V  A  +L  +
Sbjct: 335 SVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQL 394

Query: 386 IDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
            +   C PD  T+  L  GLC NG   +AF++           D +SY+ +IN  CK   
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGR 454

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
              A ++  +M+  G  P+   Y  LI+G+C+   I  A+++Y  M      P ++ YN+
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+GLCK      A SL +     G   D  TY +LI G   + K+  A  ++ E+ + G
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG 574

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           + V+ + +NILI+ LC  G   +A  +   M      P+ VTY TL+  F +  S ++  
Sbjct: 575 LQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAA 634

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPL 648
            L   ++ +G+ PD  TYN  I  L
Sbjct: 635 SLWTAILDNGLKPDIVTYNTRIKGL 659



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 263/540 (48%), Gaps = 42/540 (7%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++R+    G  + A  +   L+ +G +     ++  +S L K +++     L  EM
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCFNMIINEACQVGD 266
            + G   +   +N ++    +    E+A+ ++ ++++  G  PN+  + ++++  C++G 
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGR 279

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
            + A +++ +M   +  +   ++VT+  +I+G C+ G V+ A  +   M+KAG+  +V  
Sbjct: 280 FKEAGEVWSRMMANNHQA---DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSV 336

Query: 327 YATLIDGYARGGSSEEALRLCDE-------------MVKRGLM----------------- 356
           Y +LI G+   G + EA +  D              ++ +GL+                 
Sbjct: 337 YNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLEN 396

Query: 357 -----PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
                P+ V + + IH L   G    A  +L D  +     D F+YS +    C++G   
Sbjct: 397 DASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTH 456

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
            A +++  ++++    +++ YN LIN  C+ + +  A ++   M   G  P IITY TLI
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           DG CK    + A  + + M +   KP++  Y S+I GLC+D  +D A  +       GL 
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQ 576

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           +D + +N LI+G    GK+ EAF ++ EM+    + N V YN L++   + G   +A  L
Sbjct: 577 VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASL 636

Query: 591 MKVMILHGIIPDYVTYTTLVTRF-SKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
              ++ +G+ PD VTY T +    S N +PE V+ L ++++ +G+ P   T++ ++  ++
Sbjct: 637 WTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVL-LLNEVLATGIMPTVITWSILVRAVI 695



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 222/477 (46%), Gaps = 34/477 (7%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           +A    ++AL+  C + G  E A  V ++L +  G S ++  +   L  L KL       
Sbjct: 225 QADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAG 284

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +++  M++  +  +  T+ ++I+ LC+   ++ A  +Y  M+K+G+  +V  +N +I   
Sbjct: 285 EVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGF 344

Query: 262 CQVGDLEFALKLFRKMG--------------------------------VMSGDSVLPNS 289
           C+VG    A K +   G                                + +  S  P+ 
Sbjct: 345 CEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDK 404

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           VT   +I+G C+ G    A EI      +G + +V +Y+++I+ + + G + +A  +   
Sbjct: 405 VTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKN 464

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           MVK G  PN+ VYN+ I+       +  A+ +  +M     CP   TY+ L  GLC+   
Sbjct: 465 MVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            ++A  L  ++LE     D  +Y  LI  LC+   +  A ++   ++  GL  D++ +  
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI G C  G ++ A  +Y  MK+    PNLV YN++++G  +  S+D A SL  A    G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           L  D +TYNT I G     +  E   + +E+   GI    + ++IL+  + K+G  Q
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 223/475 (46%), Gaps = 40/475 (8%)

Query: 221 LVIYALCKECKLEEALSLYYRMLKS--GIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           LV+ +      + +A    +R L S  G  P V   N +++   +      A   F  + 
Sbjct: 87  LVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLS 146

Query: 279 VMS-GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             + G  + PN  T+N I+   C  G V+ A  +  ++ + G+  +  TY+TL+ G A+ 
Sbjct: 147 HGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKH 206

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI-DKHICPDHFT 396
              + AL L DEM   G+  + V YN+ +   F  G  E A+ V   ++ D    P+  T
Sbjct: 207 DQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLAT 266

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y ++  GLC+ G  K+A ++ ++++  +   D  +Y ILI+ LC+S ++ +A ++ S M+
Sbjct: 267 YKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMV 326

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN--------------------------- 489
             GL+ D+  Y +LI G+C+ G    A + +++                           
Sbjct: 327 KAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSE 386

Query: 490 ----MKKVEK----KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
               +K++E      P+ V + ++I+GLC++   + A  +L+ ++  G  LD  +Y+++I
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMI 446

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           N +  +G+  +A  ++  M   G   N   YN LIN  C+      A ++   M  +G  
Sbjct: 447 NRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCC 506

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           P  +TY TL+    K    +E   L  +M+  G  PD +TY ++I  L  +K  +
Sbjct: 507 PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 162/367 (44%), Gaps = 38/367 (10%)

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           ++   L+ +  VS    L   L++   C      F  L+    + G    A+++++  + 
Sbjct: 373 IMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARN 432

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
            G  + + ++++ ++   K        ++YK MV  G   N + +N +I   C+  K+ +
Sbjct: 433 SGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKIND 492

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A+ +Y  M  +G  P ++ +N +I                                    
Sbjct: 493 AIKIYIEMTSNGCCPTIITYNTLI------------------------------------ 516

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
             +G CK  + + A  +   M++ G   ++RTYA+LI G  R    + ALR+ DE++  G
Sbjct: 517 --DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG 574

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           L  + +V+N  IH L + G V+ A  +  +M +K+  P+  TY+ L  G    G + +A 
Sbjct: 575 LQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAA 634

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            L   +L+  +  D  +YN  I  LC  N       LL+ ++  G++P +IT+  L+   
Sbjct: 635 SLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAV 694

Query: 475 CKGGNIE 481
            K G I+
Sbjct: 695 IKYGPIQ 701


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 293/622 (47%), Gaps = 32/622 (5%)

Query: 56  PSLTNSLVNRVVSEFRKS--PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDA 113
           P  + S    V+S F ++  P  AL+ +  +      +  + S  A++   V  RRF DA
Sbjct: 79  PRFSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDA 138

Query: 114 LLLMGNLMSA---NSVSP-----------------LEFLEGLLDSYEICKATPA--VFDA 151
                +L        ++P                 L+    L DS    +  P    +  
Sbjct: 139 DAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYST 198

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SC 210
           L+    +    + A D++ ++        +  +N  L    K  E  +  +++ ++V   
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDP 258

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
           G   N+ T+N+++  LCK  + +E   ++ RM+ + + P+V+ + ++I+  C+ GD++ A
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318

Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
            +++ ++ + +G  ++ ++  +N ++ GFC+ GRV+ A +   +   AG+  N+RTY  +
Sbjct: 319 ARVYSEI-IKTG--LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIM 374

Query: 331 IDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           I G    G  +EA+ L D + K    +P+ V + + IH L   G    A  +  +     
Sbjct: 375 IKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
              D F+YS +  GLC  G +  A K++ ++ ++    +++ YN LI+  C+    + A 
Sbjct: 435 KQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAV 494

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           ++ S M   G  P +ITY TLIDG CK    + A  V   M +    P++  Y S+I GL
Sbjct: 495 RIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGL 554

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR-NVGIAVN 567
             D  +D A S+ +     GL +D + +N LI+G    GK+ EA  +FS+M+       N
Sbjct: 555 FSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPN 614

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            V YN L++ L + G   +A  L   +   G+ PD ++Y T +          E I+L D
Sbjct: 615 LVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLD 674

Query: 628 DMVLSGVSPDNQTYNAIISPLL 649
           +++  G+ P   T+N ++  ++
Sbjct: 675 EVLSRGIIPTVITWNILVRAVI 696



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 228/450 (50%), Gaps = 11/450 (2%)

Query: 216 VNTFNLVIYALCKECKLEEA----LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           + + N ++ A  +  +  +A     SL +      I PN+  +N+++   C  GDL+ A+
Sbjct: 119 IRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAV 178

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            LF  +       V P+ +T++ ++ G  K  R++ A ++   M ++ +  +V  Y  L+
Sbjct: 179 TLFDSL---RRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALL 235

Query: 332 DGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
            G  + G  E+ +R+ D++VK  G  PN   YN  +  L   G  +    V   M+  ++
Sbjct: 236 GGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNL 295

Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
            PD  TY IL  GLCR+G V  A ++++++++  +V DA  YN L+   C++  +  A +
Sbjct: 296 QPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK 355

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK-VEKKPNLVIYNSIINGL 509
              S    GL  ++ TY  +I G    G ++ A+++++ ++K V   P+ V + ++I+GL
Sbjct: 356 FWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414

Query: 510 CKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           C++   + A ++ + ++  G  LD  +Y+++ING    G++ +A  ++ +M   G   N 
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             YN LI+  C+      A  +   M  +G  P  +TY TL+    K    +E   +  +
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           MV +G +PD  TY ++I  L  +K  +D +
Sbjct: 535 MVENGFTPDITTYGSLIRGLFSDKKIDDAL 564



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 227/490 (46%), Gaps = 41/490 (8%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKL-KVKGHSVSIHAWNNFLSHL 191
           LLD     +  P V  ++AL+  C + G  E    V  KL K  G   ++  +N  L  L
Sbjct: 215 LLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
            K        ++++ MV+     +V T+ ++I+ LC+   ++ A  +Y  ++K+G+  + 
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDA 334

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMG-------------------------------VM 280
             +N ++   CQ G ++ A K +   G                               ++
Sbjct: 335 AMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLL 394

Query: 281 SGD-SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
             D + +P++VT   +I+G C+ G    A  I      +G   +V +Y+++I+G    G 
Sbjct: 395 EKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGR 454

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +A+++ ++M K G  PN+ +YN+ I           A+ + S M D    P   TY+ 
Sbjct: 455 LVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNT 514

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  GLC+    ++A  +  +++E     D  +Y  LI  L     +  A  +   ++ +G
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK---PNLVIYNSIINGLCKDASLD 516
           L  D++ +  LI G C  G ++ A+ V+ +MK  EKK   PNLV YN++++GL +   +D
Sbjct: 575 LKVDVMMHNILIHGLCSAGKVDEALHVFSDMK--EKKNCPPNLVTYNTLMDGLYETGYID 632

Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A +L  +    GL  D I+YNT I G     +I E   +  E+ + GI    + +NIL+
Sbjct: 633 KAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692

Query: 576 NFLCKFGCYQ 585
             + K+G  Q
Sbjct: 693 RAVIKYGPIQ 702



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 39/351 (11%)

Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           L  LL+    C      F  L+    Q G    A+ + ++ +V G  + + ++++ ++ L
Sbjct: 390 LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGL 449

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
             +  +    K+Y++M   G   N + +N +I   C+  +  +A+ +Y +M  +G  P V
Sbjct: 450 CNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTV 509

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
           + +N +I                                      +G CK  + + A  +
Sbjct: 510 ITYNTLI--------------------------------------DGLCKAEKYQEASSV 531

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M++ G   ++ TY +LI G       ++AL +  +++ +GL  + +++N  IH L +
Sbjct: 532 AREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCS 591

Query: 372 EGDVEGALFVLSDMIDKHICPDHF-TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            G V+ AL V SDM +K  CP +  TY+ L  GL   G + +A  L   + E+ +  D  
Sbjct: 592 AGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDII 651

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
           SYN  I  LC  + +    QLL  ++ RG+IP +IT+  L+    K G I+
Sbjct: 652 SYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 227/468 (48%), Gaps = 10/468 (2%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L+S  +C   P   DA++ A  Q    E + D  + + +KGHS S  ++NN L  L K  
Sbjct: 31  LNSESVC-GRPR--DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSG 87

Query: 196 EIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
            + R W  + E +  G  + +V +F + I A C+   + +   L  +M   G+ PNV  +
Sbjct: 88  NLDRTWGFFTEYL--GRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIY 145

Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            ++I   C+ GD++ A  +F +M  +    +  N   +  +INGF K G  +   E+   
Sbjct: 146 TILIEACCRNGDIDQAKVMFSRMDDL---GLAANQYIYTIMINGFFKKGYKKDGFELYQK 202

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           M   G+  N+ TY +LI  Y R G    A ++ DE+ KRG+  N V YN  I  L  +G 
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQ 262

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           V  A  +L  M   HI P   T+++L  GLC  G + +A     ++    +     +YNI
Sbjct: 263 VSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNI 322

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+   K  N +   +L+  M  RG+ P  +TY  L++ + +  +IE A +++  MK++ 
Sbjct: 323 LISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIG 382

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P+   Y  +I+GLC   ++  A  L ++   + L  + + YNT+INGY       +A 
Sbjct: 383 LVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKAL 442

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
               EM   G+  N   Y   I  LCK G   +A+ L+K M   G+ P
Sbjct: 443 KFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 209/428 (48%), Gaps = 5/428 (1%)

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           VI A  +   LE++L  +  M+  G  P+   FN  ++   + G+L+     F +    +
Sbjct: 44  VINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT 103

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
              V    +T    I  FC+ G V    E+   M   G+  NV  Y  LI+   R G  +
Sbjct: 104 QFDVYSFWIT----IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDID 159

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           +A  +   M   GL  N  +Y   I+  F +G  +    +   M    + P+ +TY+ L 
Sbjct: 160 QAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLI 219

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
              CR+G +  AFK+ +++ +  +  +A +YNILI  LC+   ++ A+ LL  M    + 
Sbjct: 220 TEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHIN 279

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P   T+  L+DG C  G ++ A+   E +K +   P LV YN +I+G  K  +      L
Sbjct: 280 PTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSEL 339

Query: 522 LQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           ++  +  G+  + +TY  L+N +  +  I +A+ MF  M+ +G+  ++  Y +LI+ LC 
Sbjct: 340 VREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 399

Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
            G   +A +L K M+   + P+ V Y T++  + K C+  + ++  ++MV +GV+P+  +
Sbjct: 400 KGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 459

Query: 641 YNAIISPL 648
           Y + I  L
Sbjct: 460 YISTIQIL 467



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 5/365 (1%)

Query: 135 LLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           LL   E    +P VF    L+ AC + G  + A  +  ++   G + + + +   ++   
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           K       ++LY++M   G + N+ T+N +I   C++ KL  A  ++  + K G+  N V
Sbjct: 189 KKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAV 248

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            +N++I   C+ G +  A  L  +   M    + P + T N +++G C  G+++ A    
Sbjct: 249 TYNILIGGLCRKGQVSKAEGLLER---MKRAHINPTTRTFNMLMDGLCNTGQLDKALSYL 305

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             +   G+   + TY  LI G+++ G+S     L  EM  RG+ P+ V Y   ++     
Sbjct: 306 EKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS 365

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            D+E A  +   M    + PD  TY +L  GLC  G + +A KL+  ++E H+  +   Y
Sbjct: 366 DDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIY 425

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N +IN  CK  N   A + L  M+  G+ P++ +Y + I   CK G    A ++ + M +
Sbjct: 426 NTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTE 485

Query: 493 VEKKP 497
              KP
Sbjct: 486 AGLKP 490



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 2/316 (0%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           E++L     MV +G  P++  +N+ +  L   G+++      ++ + +    D +++ I 
Sbjct: 55  EQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQF-DVYSFWIT 113

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
            K  C NG V + F+L  Q+    +  + + Y ILI   C++ ++  AK + S M   GL
Sbjct: 114 IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGL 173

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA-K 519
             +   Y  +I+G+ K G  +   ++Y+ MK V   PNL  YNS+I   C+D  L  A K
Sbjct: 174 AANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFK 233

Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
              + S+R    +A+TYN LI G    G++++A  +   M+   I      +N+L++ LC
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
             G   +A   ++ + L G+ P  VTY  L++ FSK  +   V EL  +M   G+SP   
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353

Query: 640 TYNAIISPLLGEKSAE 655
           TY  +++  +     E
Sbjct: 354 TYTILMNTFVRSDDIE 369


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 225/448 (50%), Gaps = 11/448 (2%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           + + +  +++ LC+  + EEA  L    + +G  PN+V +N +I+  C  G++E ALK+F
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
             M    G+   PN  T+  +I+G CK G+VE A  +   M++AG++ NV TY  LI G 
Sbjct: 236 EGM---DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQ 292

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
              G  + A RL   M   GL+PN+  ++  I  L     VE A   L  ++ K +  + 
Sbjct: 293 CNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE 352

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
             Y+ L  GLC+ G +  A +L  +++ E  V DA+SY+ LI+ LC+   L+ A  +L  
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+ +G+    +TY  +ID   +    EG  ++++ M      P++V Y   +   C++  
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472

Query: 515 LDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           ++ A+S++ Q   R    + +TYNTLI GY   G +++AF+ F  M   G   N+  Y +
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIP---DYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           L+  + K      + ++ K+  +  +     D + +  L+    +  S  E   L   M 
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMK 592

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             G  P N T NA+I+   GE +  ++V
Sbjct: 593 EHGYQPSN-TINAMIT---GEITVTNEV 616



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 225/493 (45%), Gaps = 33/493 (6%)

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           R +   + + S     N+ T+  +I A C    +  A      +L +G+ P+   +   +
Sbjct: 55  RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114

Query: 259 NEACQVGDLEFALKLFRKMGV--------------------------------MSGDSVL 286
              C+ G L  A ++F  M +                                M  DS  
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCA 174

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P++  +  +++G C+ GR E AE +    +  G + N+  Y  LIDGY   G  E AL++
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            + M      PN   Y   IH L   G VE A+ + S M++  + P+  TY+ L +G C 
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCN 294

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G ++ AF+L + +    +V + +++++LI+ LCK   +  A+  L S++ +G+  + + 
Sbjct: 295 EGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVV 354

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y +LIDG CK G I+ A ++ + M      P+   Y+S+I+GLC+   L  A  +L+   
Sbjct: 355 YTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+    +TY  +I+             +F +M   GI  + V Y + +   C+ G  +
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  ++  M+  G+ P+ VTY TL+  ++      +     + MV  G  P+  +Y  ++
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534

Query: 646 SPLLGEKSAEDQV 658
             ++ + S+++ V
Sbjct: 535 RLVVKKSSSDNSV 547



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 207/426 (48%), Gaps = 7/426 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C     V+  +V    + G TE A  ++++    G   +I  +N  +       E+    
Sbjct: 173 CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHAL 232

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K+++ M       NV T+  +I+ LCK  K+E A+ L+ RM+++G+ PNVV +  +I   
Sbjct: 233 KVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQ 292

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G L+ A   FR + +M  + ++PN  T + +I+  CK  +VE A+    +++K G+ 
Sbjct: 293 CNEGHLQCA---FRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVK 349

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            N   Y +LIDG  + G  + A  L  +M+  G +P+   Y+S I  L  +  +  A  +
Sbjct: 350 VNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLM 409

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L DM++K I     TY+I+   L R    +   K+ ++++   +  D  +Y + +   C+
Sbjct: 410 LEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCE 469

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              +  A+ ++  M+ RG+ P+++TY TLI GY   G +  A   +E M     KPN   
Sbjct: 470 EGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDS 529

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL----LDAITYNTLINGYFINGKIAEAFAMFS 557
           Y  ++  + K +S D +  + + +    L     D I +  LI G    G +AE  ++ S
Sbjct: 530 YTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLS 589

Query: 558 EMRNVG 563
            M+  G
Sbjct: 590 VMKEHG 595



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 219/479 (45%), Gaps = 4/479 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+ A    G    A   +  L   G +   +A+ +F+    +   +    +++  M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G +    T+  +++ L     + EA++++  M      P+   +  +++  C+ G  
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAG-- 191

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
                       MS +   PN V +N +I+G+C  G +E A ++   M       NVRTY
Sbjct: 192 RTEEAEVLLEEAMS-NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G  + G  E A+ L   MV+ GL PN V Y + I     EG ++ A  +L  M  
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+ +T+S+L   LC+   V++A      ++++ +  +   Y  LI+ LCK+  + A
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A +L+  MI  G +PD  +Y +LIDG C+   +  A  + E+M +   + + V Y  II+
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L ++   +  K +       G+  D +TY   +  Y   G++ +A +M  +M + G+  
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           N V YN LI      G   QA    +VM+  G  P+  +YT L+    K  S +  +++
Sbjct: 491 NLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 188/349 (53%), Gaps = 4/349 (1%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           Y +++  G       FN+++  L +  +L  A +++  M   G+   VV FN +I+  C+
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            GDL+ A  L R+M   S   V P+  T+  +I G C++GR+E A  +   M   G+  N
Sbjct: 164 AGDLDGAETLHRRM---SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPN 220

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
              +  LID + + G +E  L L  EM +RG+ P+ V YN+ ++ L    D++ A  ++ 
Sbjct: 221 AVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVV 280

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M    + PD  TY+ L  G C+   +  A ++   ++ E +  D  +Y  LI+ L K+ 
Sbjct: 281 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 340

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
             A A+++L  M+  GL PD  TY  +ID +C+ G+++  +++ + M+   +KP +V YN
Sbjct: 341 RSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYN 400

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
            I+NG CK   +  A  LL A   IG+  D ITYN L++G+  +GK+ +
Sbjct: 401 VIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 449



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 4/370 (1%)

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P +   N ++    +LG +  A+ +   M   G+   V ++ T+I G  R G  + A  L
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
              M + G+ P+   Y + I  L   G +E A  V   M  + + P+   ++IL    C+
Sbjct: 174 HRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCK 233

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G  +   +LH ++ E  +  DA +YN ++N LC++ +L +A  ++  M   GL PD +T
Sbjct: 234 KGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVT 293

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLIDGYCK   ++ A+++ +NM       + V Y ++I+GL K      A+ +L    
Sbjct: 294 YTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMM 353

Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             GL  D  TY  +I+ +   G +     +  EM+N G     V YN+++N  CK G  +
Sbjct: 354 EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMK 413

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A  L+  MI  G+ PD +TY  L      +C   +V ++ +     G  PD   Y +I+
Sbjct: 414 NADMLLNAMINIGVSPDDITYNIL---LDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIV 470

Query: 646 SPLLGEKSAE 655
             ++ +K+ +
Sbjct: 471 GEIVKKKTTK 480



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 183/370 (49%), Gaps = 6/370 (1%)

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  +  LV+L E+     ++ EM S G    V +FN +I  +C+   L+ A +L+ RM 
Sbjct: 119 FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMS 178

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
           ++G+ P+V  +  +I   C+VG +E A  +F KM    G  + PN+V    +I+  CK G
Sbjct: 179 EAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM---CGRGMKPNAVVFTILIDAHCKKG 235

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
             E   E+   M + G+  +  TY  +++G  R    + A  +  EM   GL P+ V Y 
Sbjct: 236 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYT 295

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           + I     E +++ A+ +  +M+ + +  D  TY+ L  GL + G    A ++  +++E 
Sbjct: 296 TLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEA 355

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
            +  D  +Y ++I+  C+  ++    +LL  M  +G  P ++TY  +++G+CK G ++ A
Sbjct: 356 GLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNA 415

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGY 543
             +   M  +   P+ + YN +++G CK   +   + L  A    G +  +   T I G 
Sbjct: 416 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKSAK---GTVPDLGVYTSIVGE 472

Query: 544 FINGKIAEAF 553
            +  K  + +
Sbjct: 473 IVKKKTTKTY 482



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 3/334 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           ++ AG+    + +  L+    R G    A  + DEM  RG+    V +N+ I  +   GD
Sbjct: 107 LLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGD 166

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++GA  +   M +  + PD +TY  L +GLCR G ++ A  +  ++    M  +A  + I
Sbjct: 167 LDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTI 226

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK  +     +L   M  RG+ PD +TY  +++G C+  +++ A  +   M+   
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEA 552
            +P+ V Y ++I+G CK+  LD A  + Q   ++ +GL D +TY  LI+G    G+ A+A
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL-DEVTYTALISGLSKAGRSADA 345

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  EM   G+  +   Y ++I+  C+ G  +    L+K M   G  P  VTY  ++  
Sbjct: 346 ERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNG 405

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           F K    +    L + M+  GVSPD+ TYN ++ 
Sbjct: 406 FCKLGQMKNADMLLNAMINIGVSPDDITYNILLD 439



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 159/313 (50%), Gaps = 1/313 (0%)

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           +R  ++ EA     +++  GL P   ++N  +  L   G++  A  V  +M  + +    
Sbjct: 92  SRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTV 151

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            +++ +  G+CR G +  A  LH ++ E  +  D Y+Y  LI  LC+   +  A+ +   
Sbjct: 152 VSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEK 211

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  RG+ P+ + +  LID +CK G+ E  ++++  M++   +P+ V YN+I+NGLC+   
Sbjct: 212 MCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARD 271

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L +A  ++   +  GL  D +TY TLI+GY    ++  A  +   M   G+ +++V Y  
Sbjct: 272 LKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTA 331

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ L K G    A  ++  M+  G+ PD  TYT ++  F +    +  + L  +M   G
Sbjct: 332 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 391

Query: 634 VSPDNQTYNAIIS 646
             P   TYN I++
Sbjct: 392 RKPGVVTYNVIMN 404



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 128/246 (52%), Gaps = 1/246 (0%)

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           + R     +A   + Q+L+  +  +A  +N+L+  L +   LA+A+ +   M  RG+   
Sbjct: 91  MSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRT 150

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++++ T+I G C+ G+++GA  ++  M +    P++  Y ++I GLC+   ++ A+ + +
Sbjct: 151 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 210

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G+  +A+ +  LI+ +   G       +  EMR  G+  + V YN ++N LC+  
Sbjct: 211 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 270

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             + A  ++  M   G+ PD VTYTTL+  + K    +  +E+  +MV  GV  D  TY 
Sbjct: 271 DLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYT 330

Query: 643 AIISPL 648
           A+IS L
Sbjct: 331 ALISGL 336


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 208/438 (47%), Gaps = 4/438 (0%)

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           Y     ++N ++  L K  + +     Y  ML +G  PN   +  ++   CQ    E A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            +FR M   +     PN  +++ +I G C+  +V+ A E+   MI  G   NV TY +L+
Sbjct: 73  SVFRGM---AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G  + G  +EA+ L   MV RG  P+ VVYN  I     +GD+  A  +  +M++K   
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P  FTY+ L  G  R G   +   L   +L +  V + +++N L++  CK  ++  A +L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M   G  PD+++Y TLI G C  G    A ++   M +    P++V YN +I+G  K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             +LD A  L     + GL  DA +Y+T+I+     GK+  AF +F +M   G A +   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
              L+  LC+     ++ EL + M+    +P    Y  L+ +  K    ++V E+  ++ 
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429

Query: 631 LSGVSPDNQTYNAIISPL 648
             G SPD +    I+  L
Sbjct: 430 ERGFSPDVEISKVILETL 447



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 187/372 (50%), Gaps = 1/372 (0%)

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +PN+ T+  ++   C+  R E A  +   M   G   NV +Y+ LI G  RG   +EA  
Sbjct: 49  VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAE 108

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L +EM+  G  PN V Y S +  L   G ++ A+ + S M+ +   PD   Y++L  G  
Sbjct: 109 LLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           + G + +A++L  ++LE+  +   ++YN L++   +       + L   M+ +G +P+I 
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           T+  L+DG+CK G++  A +++  M+ +   P++V YN++I G+C       A+ LL+  
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288

Query: 526 QRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
            R G+  D ++YN LI+GY  +G +  A  +F E+   G+  +   Y+ +I+ LC+ G  
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
             A  + K MI +G  PD      LV    +     E  EL   MV     P    YN +
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408

Query: 645 ISPLLGEKSAED 656
           +  L   K ++D
Sbjct: 409 MYKLCKAKRSDD 420



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 208/474 (43%), Gaps = 49/474 (10%)

Query: 78  LEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD 137
           + F+ W G    ++H   S   ++ +L    R D       ++++A              
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAG------------- 47

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
               C      +  L+R+  Q    E A  V + +  +G S ++ +++  ++ L +  ++
Sbjct: 48  ----CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKV 103

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
               +L  EM+  G+  NV T+  ++  LCK  KL+EA+ L+ RM+  G  P+ V +N++
Sbjct: 104 DEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVL 163

Query: 258 INEACQVGDLEFALKLFRKM-------------GVMSGDS-------------------V 285
           I+   + GD+  A +LF +M              ++SG S                    
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGC 223

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           +PN  T N +++GFCK+G +  A  +   M   G   +V +Y TLI G    G   EA R
Sbjct: 224 VPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQR 283

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
           L  EM++ G+ P+ V YN  I      G ++ A+ +  ++    + PD F+YS +   LC
Sbjct: 284 LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLC 343

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           R G V  AF +   ++      DA     L+  LC+   L  + +L  +M+    +P I 
Sbjct: 344 RAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIP 403

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            Y  L+   CK    +   +++  + +    P++ I   I+  L +    DAA+
Sbjct: 404 EYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 216/421 (51%), Gaps = 6/421 (1%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           CK  K +E+L     M+  G  P+V+    +I     +  +E A+++   M ++      
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQV---MEILEKHGK- 143

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+   +N +I+GFCK  RV+ A ++   M K G + +V TY  LI  +   G  + ALR+
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D+++K    P  + Y   I     +G ++ A+ +L +M+ + + PD +TY+++  G+C+
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G + +AF+  +++ +   V    +YNIL+  L         ++L+S M+V+G  P+ IT
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y TLI   C+ G I+ A  V + MK+    P+   Y+ +I+ LC++  +D A   L    
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 527 RIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G L D ++YN+++     NG   EA  +F ++  VG   N   YN L   L   G   
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS-GVSPDNQTYNAI 644
           +A  ++  M+ +GI PD +TY +L++   ++   ++ IEL  DM  S    P   +YN +
Sbjct: 444 RALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503

Query: 645 I 645
           +
Sbjct: 504 L 504



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 211/451 (46%), Gaps = 16/451 (3%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L++    +   E A  V++ L+  G    + A+N  +S   K + +    K+   M   G
Sbjct: 118 LIKGFFNMKKIEKAIQVMEILEKHGKP-DVFAYNAVISGFCKADRVDHASKVLDRMKKRG 176

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           +  +V T+N++I   C   +L+ AL +  ++LK    P V+ + ++I      G ++ A+
Sbjct: 177 FEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAM 236

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           KL  +   M    + P+  T+N ++NG CK G ++ A E    + K G    V TY  L+
Sbjct: 237 KLLDE---MLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILL 293

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
                 G  E   +L  +M+ +G  PN + Y++ I  L  +G ++ A  VL  M +K + 
Sbjct: 294 RDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALA 353

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD ++Y  L   LCR G V  A +  + ++    + D  SYN ++  LCK+ N   A  +
Sbjct: 354 PDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNI 413

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              +   G  P+  +Y TL       G+   A+ +   M      P+ + YNS+I+ LC+
Sbjct: 414 FEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR 473

Query: 512 DASLDAAKSLLQASQRIGLLDA-------ITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
           D  +D A  LL     + + ++       I+YNT++ G     +I +A  + + M N G 
Sbjct: 474 DGLVDQAIELL-----VDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGC 528

Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMI 595
             N+  Y +LI  +   G    A EL  +++
Sbjct: 529 LPNETTYTLLIQGIGFAGWRYDAMELANLLV 559



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 214/449 (47%), Gaps = 11/449 (2%)

Query: 146 PAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL 203
           P VF  +A++    +    + A  V+ ++K +G    +  +N  + +      +    ++
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
             +++       V T+ ++I A   +  ++EA+ L   ML  G+ P+   +N+++N  C+
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G L+ A +   +   +S +  +    T+N ++      G+ E+ E++   M+  G + N
Sbjct: 264 EGMLDRAFEFLSR---ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPN 320

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
             TY+TLI    R G  +EA  +   M ++ L P+   Y+  I  L  EG V+ A+  L 
Sbjct: 321 PITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLD 380

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           DMI     PD  +Y+ +   LC+NG   +A  +  ++ E     +A SYN L   L  S 
Sbjct: 381 DMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIY 502
           +   A  ++  M+  G+ PD ITY +LI   C+ G ++ A+++  +M + EK +P ++ Y
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISY 500

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N+++ GLCK   +  A  +L A    G L +  TY  LI G    G   +A     E+ N
Sbjct: 501 NTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAM----ELAN 556

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQAREL 590
           + + ++ +  +    F   F  +   +EL
Sbjct: 557 LLVNMDAISEDSFKRFQKIFPVFDAHKEL 585



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 191/396 (48%), Gaps = 5/396 (1%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F   +N +C+    + +L   + M V  G    P+ +    +I GF  + ++E A ++  
Sbjct: 80  FMKTLNRSCKSAKYDESLYFLQHM-VNRG--YKPDVILCTKLIKGFFNMKKIEKAIQVME 136

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            + K G   +V  Y  +I G+ +    + A ++ D M KRG  P+ V YN  I      G
Sbjct: 137 ILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRG 195

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ AL V+  ++  +  P   TY+IL +     G + +A KL +++L   +  D Y+YN
Sbjct: 196 RLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYN 255

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           +++N +CK   L  A + LS +   G +  + TY  L+      G  E   ++  +M   
Sbjct: 256 VVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK 315

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
             +PN + Y+++I  LC+D  +D AK++L+  +   L  D  +Y+ LI+     GK+  A
Sbjct: 316 GCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLA 375

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
                +M + G   + + YN ++  LCK G   +A  + + +   G  P+  +Y TL   
Sbjct: 376 IEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGA 435

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              +      + +  +M+ +G+ PD  TYN++IS L
Sbjct: 436 LWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCL 471



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 2/324 (0%)

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           +    +E+L     MV RG  P+ ++    I   F    +E A+ V+ ++++KH  PD F
Sbjct: 89  KSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDVF 147

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+ +  G C+   V  A K+ +++ +     D  +YNILI   C    L  A +++  +
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           +     P +ITY  LI+     G I+ A+++ + M     +P+   YN ++NG+CK+  L
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 516 DAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           D A   L    + G +  + TYN L+      GK      + S+M   G   N + Y+ L
Sbjct: 268 DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTL 327

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I  LC+ G   +A+ ++KVM    + PD  +Y  L++   +    +  IE  DDM+  G 
Sbjct: 328 ITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGH 387

Query: 635 SPDNQTYNAIISPLLGEKSAEDQV 658
            PD  +YN+I++ L    +A++ +
Sbjct: 388 LPDILSYNSILASLCKNGNADEAL 411



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 177/366 (48%), Gaps = 21/366 (5%)

Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
           R D AL +M  L+  N                 CK T   +  L+ A    G  + A  +
Sbjct: 196 RLDLALRVMDQLLKDN-----------------CKPTVITYTILIEATITQGGIDEAMKL 238

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
           + ++  +G     + +N  ++ + K   + R ++    +   G V  V+T+N+++  L  
Sbjct: 239 LDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLN 298

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           E K E    L   ML  G  PN + ++ +I   C+ G ++ A  + +   VM   ++ P+
Sbjct: 299 EGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLK---VMKEKALAPD 355

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
             +++ +I+  C+ G+V+ A E    MI  G   ++ +Y +++    + G+++EAL + +
Sbjct: 356 GYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFE 415

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           ++ + G  PN   YN+    L++ GD   AL ++ +M+   I PD  TY+ L   LCR+G
Sbjct: 416 KLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475

Query: 409 CVKQAFKLHNQVLE-EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
            V QA +L   + E E       SYN ++  LCK   +  A ++L++M+  G +P+  TY
Sbjct: 476 LVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTY 535

Query: 468 GTLIDG 473
             LI G
Sbjct: 536 TLLIQG 541



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 139/296 (46%), Gaps = 13/296 (4%)

Query: 133 EGLLD-SYEI--------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           EG+LD ++E         C A  + ++ L+R     G  E    ++  + VKG   +   
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           ++  ++ L +  +I     + K M       +  +++ +I ALC+E K++ A+     M+
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             G  P+++ +N I+   C+ G+ + AL +F K+G +      PN+ ++N +       G
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEV---GCPPNAGSYNTLFGALWSSG 440

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVVY 362
               A  +   M+  GID +  TY +LI    R G  ++A+ L  +M +     P  + Y
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISY 500

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           N+ +  L     +  A+ VL+ M+++   P+  TY++L +G+   G    A +L N
Sbjct: 501 NTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELAN 556



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 35/216 (16%)

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           +N  CKS     +   L  M+ RG  PD+I    LI G+              NMKK+EK
Sbjct: 84  LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFF-------------NMKKIEK 130

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
                                 A  +++  ++ G  D   YN +I+G+    ++  A  +
Sbjct: 131 ----------------------AIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKV 168

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
              M+  G   + V YNILI   C  G    A  +M  ++     P  +TYT L+     
Sbjct: 169 LDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATIT 228

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
               +E ++L D+M+  G+ PD  TYN +++ +  E
Sbjct: 229 QGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 219/438 (50%), Gaps = 4/438 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  TF  V+  LC   ++ +AL +   M   G  P    +++I+  AC+ G    ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
                M       ++   N ++N  C+ G V+ A  +   +   G + ++ +Y  ++ G 
Sbjct: 170 E---AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                  +   L DEMV+    PN V +N+ I +L   G  E    VL+ M +    PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
             Y+ +  G+C+ G ++ A ++ N++    +  +   YN ++  LC +     A++LLS 
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  +    D +T+  L+D +C+ G ++  +++ E M      P+++ Y ++ING CK+  
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  LL++    G   + ++Y  ++ G    G+  +A  + S+M   G   N V +N 
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LINFLCK G  +QA EL+K M+++G  PD ++Y+T++    K    EE +EL + MV  G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 634 VSPDNQTYNAIISPLLGE 651
           +SP+   Y++I   L  E
Sbjct: 527 ISPNTIIYSSIACALSRE 544



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 226/431 (52%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +++++ A C+      ++ +   M   G   +    N+++N  C+ G ++ A+ L RK+ 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
               ++   + V++N ++ G C   R    EE+   M++     N+ T+ TLI    R G
Sbjct: 209 FFGCEA---DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E    +  +M + G  P+  +Y + I  +  EG +E A  +L+ M    + P+   Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            + KGLC     K+A +L +++ ++    D  ++NIL+++ C++  +    +LL  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDA 517
           G +PD+ITY T+I+G+CK G I+ AV + ++M     KPN V Y  ++ GLC     +DA
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            + + Q  Q+    + +T+NTLIN     G + +A  +  +M   G + + + Y+ +I+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L K G  ++A EL+ VM+  GI P+ + Y+++    S+     +VI++ D++  + +  D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 638 NQTYNAIISPL 648
              YNA+IS L
Sbjct: 566 AVLYNAVISSL 576



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 5/446 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C Q G  + A  +++KL   G    I ++N  L  L      G   +L  EMV      N
Sbjct: 192 CEQ-GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           + TFN +I  LC+    E    +  +M + G  P++  +  II+  C+ G LE A ++  
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M       + PN V +N ++ G C   R + AEE+   M +     +  T+  L+D + 
Sbjct: 311 RM---PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFC 367

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  +  + L ++M+  G MP+ + Y + I+    EG ++ A+ +L  M      P+  
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +Y+I+ KGLC  G    A +L +Q++++    +  ++N LIN+LCK   +  A +LL  M
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           +V G  PD+I+Y T+IDG  K G  E A+++   M      PN +IY+SI   L ++  +
Sbjct: 488 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           +    +    +   +  DA+ YN +I+      +   A   F+ M + G   N+  Y +L
Sbjct: 548 NKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTML 607

Query: 575 INFLCKFGCYQQARELMKVMILHGII 600
           I  L   G  ++A+EL+  +   G +
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 239/506 (47%), Gaps = 6/506 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           LE L+ +  S++ C   P ++  ++ A  + G    +  V++ +  KG ++     N  L
Sbjct: 131 LEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           + + +   +     L +++   G   ++ ++N V+  LC   +  +   L   M++    
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN+V FN +I   C+ G  E   ++   +  MS     P+   +  II+G CK G +E A
Sbjct: 249 PNIVTFNTLIGYLCRNGLFE---RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            EI   M   G+  NV  Y T++ G       +EA  L  EM ++    ++V +N  + +
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G V+  + +L  M+     PD  TY+ +  G C+ G + +A  L   +       +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY I++  LC +     A++L+S MI +G  P+ +T+ TLI+  CK G +E A+++ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            M      P+L+ Y+++I+GL K    + A  LL      G+  + I Y+++       G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ +   MF  +++  I  + V YN +I+ LCK     +A +    M+ +G +P+  TYT
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSG 633
            L+   +     +E  EL  ++   G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 195/434 (44%), Gaps = 42/434 (9%)

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV +N ++   C+ G L  A +L   +       V PN+ T   ++ G C  GR+  A E
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV------PVPPNAYTFFPVVRGLCTRGRIADALE 132

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G       Y  +++   R G    ++R+ + M  +G   +    N  ++ + 
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            +G V+ A+ +L  +       D  +Y+ + KGLC         +L ++++      +  
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           ++N LI YLC++       ++L+ M   G  PDI  Y T+IDG CK G++E A ++   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 491 KKVEKKPNLVIYNSIINGLC-----------------KDASLDAAK-------------- 519
                KPN+V YN+++ GLC                 KD  LD                 
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 520 ----SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
                LL+     G + D ITY T+ING+   G I EA  +   M + G   N V Y I+
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           +  LC  G +  A ELM  MI  G  P+ VT+ TL+    K    E+ IEL   M+++G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 635 SPDNQTYNAIISPL 648
           SPD  +Y+ +I  L
Sbjct: 493 SPDLISYSTVIDGL 506



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 154/336 (45%), Gaps = 4/336 (1%)

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V  Y  ++ GY R G    A RL   +    + PN   +   +  L   G +  AL VL 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K   P    Y ++ +  CR+G  + + ++   +  +    D  + N+++N +C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  LL  +   G   DI++Y  ++ G C         ++ + M +V+  PN+V +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 504 SIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  LC++   +    +L Q S+     D   Y T+I+G    G +  A  + + M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N V YN ++  LC    +++A EL+  M       D VT+  LV  F +N   + V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           IEL + M+  G  PD  TY  +I+    E   ++ V
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 219/438 (50%), Gaps = 4/438 (0%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  TF  V+  LC   ++ +AL +   M   G  P    +++I+  AC+ G    ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
                M       ++   N ++N  C+ G V+ A  +   +   G + ++ +Y  ++ G 
Sbjct: 170 E---AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                  +   L DEMV+    PN V +N+ I +L   G  E    VL+ M +    PD 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
             Y+ +  G+C+ G ++ A ++ N++    +  +   YN ++  LC +     A++LLS 
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  +    D +T+  L+D +C+ G ++  +++ E M      P+++ Y ++ING CK+  
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  LL++    G   + ++Y  ++ G    G+  +A  + S+M   G   N V +N 
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LINFLCK G  +QA EL+K M+++G  PD ++Y+T++    K    EE +EL + MV  G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 634 VSPDNQTYNAIISPLLGE 651
           +SP+   Y++I   L  E
Sbjct: 527 ISPNTIIYSSIACALSRE 544



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 226/431 (52%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +++++ A C+      ++ +   M   G   +    N+++N  C+ G ++ A+ L RK+ 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
               ++   + V++N ++ G C   R    EE+   M++     N+ T+ TLI    R G
Sbjct: 209 FFGCEA---DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E    +  +M + G  P+  +Y + I  +  EG +E A  +L+ M    + P+   Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            + KGLC     K+A +L +++ ++    D  ++NIL+++ C++  +    +LL  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDA 517
           G +PD+ITY T+I+G+CK G I+ AV + ++M     KPN V Y  ++ GLC     +DA
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            + + Q  Q+    + +T+NTLIN     G + +A  +  +M   G + + + Y+ +I+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L K G  ++A EL+ VM+  GI P+ + Y+++    S+     +VI++ D++  + +  D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 638 NQTYNAIISPL 648
              YNA+IS L
Sbjct: 566 AVLYNAVISSL 576



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 219/450 (48%), Gaps = 4/450 (0%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           ++ A  + G  + A  +++KL   G    I ++N  L  L      G   +L  EMV   
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
              N+ TFN +I  LC+    E    +  +M + G  P++  +  II+  C+ G LE A 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           ++  +M       + PN V +N ++ G C   R + AEE+   M +     +  T+  L+
Sbjct: 307 EILNRM---PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILV 363

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           D + + G  +  + L ++M+  G MP+ + Y + I+    EG ++ A+ +L  M      
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P+  +Y+I+ KGLC  G    A +L +Q++++    +  ++N LIN+LCK   +  A +L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           L  M+V G  PD+I+Y T+IDG  K G  E A+++   M      PN +IY+SI   L +
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543

Query: 512 DASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  ++    +    +   +  DA+ YN +I+      +   A   F+ M + G   N+  
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 603

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGII 600
           Y +LI  L   G  ++A+EL+  +   G +
Sbjct: 604 YTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 239/506 (47%), Gaps = 6/506 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           LE L+ +  S++ C   P ++  ++ A  + G    +  V++ +  KG ++     N  L
Sbjct: 131 LEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           + + +   +     L +++   G   ++ ++N V+  LC   +  +   L   M++    
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN+V FN +I   C+ G  E   ++   +  MS     P+   +  II+G CK G +E A
Sbjct: 249 PNIVTFNTLIGYLCRNGLFE---RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            EI   M   G+  NV  Y T++ G       +EA  L  EM ++    ++V +N  + +
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G V+  + +L  M+     PD  TY+ +  G C+ G + +A  L   +       +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY I++  LC +     A++L+S MI +G  P+ +T+ TLI+  CK G +E A+++ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            M      P+L+ Y+++I+GL K    + A  LL      G+  + I Y+++       G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ +   MF  +++  I  + V YN +I+ LCK     +A +    M+ +G +P+  TYT
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSG 633
            L+   +     +E  EL  ++   G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 195/434 (44%), Gaps = 42/434 (9%)

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV +N ++   C+ G L  A +L   +       V PN+ T   ++ G C  GR+  A E
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV------PVPPNAYTFFPVVRGLCTRGRIADALE 132

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G       Y  +++   R G    ++R+ + M  +G   +    N  ++ + 
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            +G V+ A+ +L  +       D  +Y+ + KGLC         +L ++++      +  
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           ++N LI YLC++       ++L+ M   G  PDI  Y T+IDG CK G++E A ++   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 491 KKVEKKPNLVIYNSIINGLC-----------------KDASLDAAK-------------- 519
                KPN+V YN+++ GLC                 KD  LD                 
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 520 ----SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
                LL+     G + D ITY T+ING+   G I EA  +   M + G   N V Y I+
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           +  LC  G +  A ELM  MI  G  P+ VT+ TL+    K    E+ IEL   M+++G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 635 SPDNQTYNAIISPL 648
           SPD  +Y+ +I  L
Sbjct: 493 SPDLISYSTVIDGL 506



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 154/336 (45%), Gaps = 4/336 (1%)

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V  Y  ++ GY R G    A RL   +    + PN   +   +  L   G +  AL VL 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K   P    Y ++ +  CR+G  + + ++   +  +    D  + N+++N +C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  LL  +   G   DI++Y  ++ G C         ++ + M +V+  PN+V +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 504 SIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  LC++   +    +L Q S+     D   Y T+I+G    G +  A  + + M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N V YN ++  LC    +++A EL+  M       D VT+  LV  F +N   + V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           IEL + M+  G  PD  TY  +I+    E   ++ V
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 202/397 (50%), Gaps = 7/397 (1%)

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           Q+G L+ AL +FR++        LP     N +++G  K  R   A E+   M++ G+  
Sbjct: 123 QMGLLDEALYVFRRLWT------LPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVP 176

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           +V TY TLI+     G+  +A  + D+MV R + PN + Y S I  L  EG +  A  + 
Sbjct: 177 SVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLF 236

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M +  + P+ +TY++L  G C+   V  AF L+ ++L   ++ +A  +  LI+  CK+
Sbjct: 237 DAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKA 296

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
              + AK +   M   G+ P +  Y +L+DG  + G+ + A+ +Y+ M ++   P+    
Sbjct: 297 KRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTC 356

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           + ++ GLC    +  A   L+  +  G+ L+A  YN LI+ Y  NG + EA A  + M  
Sbjct: 357 SIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTE 416

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
           VG+  N V Y+ LI+   K G  Q A  +   M+  GI P+ VTYT L+   +KN   + 
Sbjct: 417 VGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDA 476

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
               H +M+ +G+SP+  T + ++  L  E   +D V
Sbjct: 477 AFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAV 513



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 247/512 (48%), Gaps = 25/512 (4%)

Query: 144 ATPA-VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           A+PA     LV A +Q+G  + A  V ++L       ++ A N  L  LVK       W+
Sbjct: 108 ASPAPALGVLVIALSQMGLLDEALYVFRRLWTLP---ALPACNAVLDGLVKARRSRCAWE 164

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ EM+  G V +V T+N +I A   +  + +A  ++ +M+   I PNV+ +  +I   C
Sbjct: 165 LFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLC 224

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +  A +LF     M    + PN  T+N +++G C+   V  A  +   ++ +G+  
Sbjct: 225 EEGCIGDAERLF---DAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIP 281

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N   + TLIDG+ +     EA  +  +M + G+ P   VYNS +   F  GD + AL + 
Sbjct: 282 NAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLY 341

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M    +CPD FT SI+ +GLC  G ++ A +    V E+ +  +A +YN LI+  C++
Sbjct: 342 QEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRN 401

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            NL  A    + M   G+ P++++Y +LIDG+ K G ++ A+ +Y  M     +PN+V Y
Sbjct: 402 GNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTY 461

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
            ++I+G  K+  +DAA    +     G+  +AIT + L++G     ++ +A     E   
Sbjct: 462 TALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSG 521

Query: 562 V-----------------GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
           +                  +  N   Y  LI  L   G + +A +L   M   G+I D  
Sbjct: 522 IKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSF 581

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           TYT L+            + L+ DM+  GV P
Sbjct: 582 TYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 206/444 (46%), Gaps = 21/444 (4%)

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N V+  L K  +   A  L+  ML+ G+ P+VV +N +IN     G +  A +++ +M  
Sbjct: 147 NAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVA 206

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
              D   PN +T+  +I   C+ G +  AE +  AM +AG+  N  TY  L+ G+ +G  
Sbjct: 207 RQID---PNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDD 263

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
              A  L  E++  GL+PN VV+ + I           A  +  DM    + P    Y+ 
Sbjct: 264 VNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNS 323

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G  R+G  ++A  L+ ++    +  D ++ +I++  LC    +  A + L  +   G
Sbjct: 324 LMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDG 383

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           +  +   Y  LID YC+ GN+E A+     M +V  +PN+V Y+S+I+G  K   +  A 
Sbjct: 384 VNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAM 443

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
           ++       G+  + +TY  LI+G+  NG I  AF    EM   GI+ N +  ++L++ L
Sbjct: 444 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGL 503

Query: 579 CKFGCYQQAREL------MKVMILHG-----------IIPDYVTYTTLVTRFSKNCSPEE 621
           C+    Q A         +K   +H            +IP+   Y TL+     +    E
Sbjct: 504 CRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYE 563

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
             +L   M  SG+  D+ TY  +I
Sbjct: 564 AGKLFSYMRKSGMISDSFTYTLLI 587


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 216/442 (48%), Gaps = 46/442 (10%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +G S+     +  +S L    E    +  Y +++  G       FN+++    +  +L  
Sbjct: 148 RGISLPAPVCSGLMSRLPSTPEA---YTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVS 204

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A  ++  M +S + P VV FN +I+  C+  DL+    L+++M   S   V P+  T+  
Sbjct: 205 ARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAVDGLYKEM---SDVGVKPDVYTYGA 260

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           +I GFC+ GR+E A ++   M   G++ N   + TLID + + G+    + L  +M  RG
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
           +MP+ V YN+ ++ L    +++ A  ++ +M +  + PD  TY+ L  G C++G +  A 
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAM 380

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
            +  ++ E+ +  D  +Y  LI+ L K+     A+++L  M+   L PD  TY  +ID +
Sbjct: 381 DIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAF 440

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
           C+ G+++   ++ + M+   KKP +V YN I+NGLCK   +  A  LL A   IG+  D 
Sbjct: 441 CRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDD 500

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           ITYN L++G   +GK+A +  + S                                    
Sbjct: 501 ITYNILLDGQCKHGKVANSEELESS----------------------------------- 525

Query: 594 MILHGIIPDYVTYTTLVTRFSK 615
               G++PD+  YT+L++  +K
Sbjct: 526 ---KGMVPDFAVYTSLISELAK 544



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 203/434 (46%), Gaps = 13/434 (2%)

Query: 225 ALCKECKLEEALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
           A   E  L +A SL    L+ GI  P  VC  ++           F L+L          
Sbjct: 128 AYADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDA------- 180

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            + P +   N ++  F +LG +  A ++ +  ++  +   V T+ TLI G  R    +  
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKV-FDEMRRSVQPTVVTFNTLISGMCRARDLDAV 239

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             L  EM   G+ P+   Y + I      G +E A+ + ++M D  + P+   ++ L   
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            C+ G V     L+  +    ++ D  +YN L+N LC++ NL AA+ ++  M   GL PD
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA-SLDAAKSLL 522
            +TY TLIDG CK G ++ A+ + + M + E   + V Y ++I+GL K    +DA + L 
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419

Query: 523 QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
           +  +     D  TY  +I+ +   G +   F +  EM+N G     V YN+++N LCK G
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             + A  L+  M+  G+ PD +TY  L+    K+       EL       G+ PD   Y 
Sbjct: 480 QMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYT 536

Query: 643 AIISPLLGEKSAED 656
           ++IS L  +K A++
Sbjct: 537 SLISELAKKKPAKN 550



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 159/319 (49%), Gaps = 9/319 (2%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
            + A +G Y  +  + VK     ++ +   +    +   +    K++ EM   G   N  
Sbjct: 235 DLDAVDGLYKEMSDVGVKP---DVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAV 291

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
            F  +I A CKE  +   + LY  M   G+ P++V +N ++N  C+  +L+ A  +  + 
Sbjct: 292 VFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEE- 350

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    + P+ VT+  +I+G CK G+++ A +I+  M +  +  +  TY  LI G ++ 
Sbjct: 351 --MKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKA 408

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G   +A R+  EM++  L P+N  Y   I     +GDV+    +L +M +K   P   TY
Sbjct: 409 GRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTY 468

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           +++  GLC+ G +K A  L + +L   +  D  +YNIL++  CK   +A +++L SS   
Sbjct: 469 NVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS--- 525

Query: 458 RGLIPDIITYGTLIDGYCK 476
           +G++PD   Y +LI    K
Sbjct: 526 KGMVPDFAVYTSLISELAK 544



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 170/327 (51%), Gaps = 4/327 (1%)

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
           +R  S+ EA     +++  G+ P   ++N  +      G++  A  V  +M  + + P  
Sbjct: 162 SRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTV 220

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            T++ L  G+CR   +     L+ ++ +  +  D Y+Y  LI   C++  +  A ++ + 
Sbjct: 221 VTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNE 280

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+ P+ + + TLID +CK GN+   + +Y++M+     P+LV YN+++NGLC+  +
Sbjct: 281 MRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARN 340

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L AA+S+++  +  GL  D +TY TLI+G   +GK+  A  +  +M    +++++V Y  
Sbjct: 341 LKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTA 400

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+ L K G    A  +++ M+   + PD  TYT ++  F +    +   +L  +M   G
Sbjct: 401 LISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKG 460

Query: 634 VSPDNQTYNAIISPL--LGEKSAEDQV 658
             P   TYN I++ L  LG+    D +
Sbjct: 461 KKPGVVTYNVIMNGLCKLGQMKNADML 487



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 153/315 (48%), Gaps = 8/315 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L+ ++GL          P V+   AL++   + G  E A  +  +++  G + +   +  
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K   +     LY++M   G + ++  +N ++  LC+   L+ A S+   M  +G
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           + P+ V +  +I+  C+ G L+ A+ + +K   M+   V  + VT+  +I+G  K GR  
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQK---MAEKEVSLDEVTYTALISGLSKAGRPV 412

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            AE +   M++A ++ +  TY  +ID + R G  +   +L  EM  +G  P  V YN  +
Sbjct: 413 DAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIM 472

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           + L   G ++ A  +L  M++  + PD  TY+IL  G C++G V  + +L +    + MV
Sbjct: 473 NGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMV 529

Query: 427 GDAYSYNILINYLCK 441
            D   Y  LI+ L K
Sbjct: 530 PDFAVYTSLISELAK 544


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 249/503 (49%), Gaps = 4/503 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ +L+ A       E A   ++K+K +G  ++I  ++  +    K+         ++E 
Sbjct: 321 VYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEA 380

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N   +  +IYA C+ C ++ A +L   M + GI   +  ++ +++    +G+ 
Sbjct: 381 KEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNE 440

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E  L +F ++         P+ +++ C+IN + K+G+V  A EI   M  +GI  N++TY
Sbjct: 441 EKCLIVFDRLKECG---FFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTY 497

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LI+G+ +      A  + ++  K GL P+ V+YN+ I      G+++ A+ ++  M  
Sbjct: 498 SMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQK 557

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +   P   T+  +  G  R G +++A ++ + +     +   ++YN LI  L +   +  
Sbjct: 558 ERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTK 617

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M V G+ P+  TY TL+ GY   G+ E A Q +  ++    + ++  Y +++ 
Sbjct: 618 AVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLK 677

Query: 508 GLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             CK   + +A ++  + S +    +   YN LI+G+   G + EA  +  +MR  G+  
Sbjct: 678 SCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLP 737

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y   IN  CK G  Q+A E+++ M   GI P+  TYTTL+  +++   PE+ +   
Sbjct: 738 DIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCF 797

Query: 627 DDMVLSGVSPDNQTYNAIISPLL 649
           ++M L+G  PD   Y+ +++ LL
Sbjct: 798 EEMKLAGFKPDKAVYHCLVTSLL 820



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 207/441 (46%), Gaps = 4/441 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  ++ A  QI   + A  ++++++ +G    I  ++  +     +    +   ++  +
Sbjct: 391 IYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 450

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
             CG+  +V ++  +I    K  K+ +AL +   M  SGI  N+  ++M+IN   ++ D 
Sbjct: 451 KECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDW 510

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F      + D + P+ V +N II  FC +G ++ A  +   M K       RT+
Sbjct: 511 ANAFSVFEDF---TKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTF 567

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I G+AR G    AL + D M + G +P    YN+ I  L  +  +  A+ +L +M  
Sbjct: 568 LPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNV 627

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+  TY+ L +G    G  ++AF+    +  E +  D Y+Y  L+   CKS  + +
Sbjct: 628 AGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQS 687

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M  + +  +   Y  LIDG+ + G++  A  + + M+K    P++  Y S IN
Sbjct: 688 ALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFIN 747

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             CK   +  A  ++Q  +  G+   + TY TLING+       +A + F EM+  G   
Sbjct: 748 ACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKP 807

Query: 567 NKVGYNILINFLCKFGCYQQA 587
           +K  Y+ L+  L     + Q+
Sbjct: 808 DKAVYHCLVTSLLSRATFAQS 828



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 198/407 (48%), Gaps = 4/407 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  ++   T IG  E    V  +LK  G   S+ ++   ++   K+ ++ +  ++ K M
Sbjct: 426 IYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMM 485

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N+ T++++I    K      A S++    K G+ P+VV +N II   C +G++
Sbjct: 486 KMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNM 545

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ + R+M     +   P + T   II+GF + G +  A EI   M ++G    V TY
Sbjct: 546 DRAICMVRQM---QKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTY 602

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G        +A+ + DEM   G+ PN   Y + +    + GD E A    + + +
Sbjct: 603 NALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRN 662

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  D +TY  L K  C++G ++ A  +  ++  +++  + + YNILI+   +  ++  
Sbjct: 663 EGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWE 722

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L+  M   GL+PDI TY + I+  CK G+++ A ++ + M+    KPNL  Y ++IN
Sbjct: 723 AADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLIN 782

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
           G  + +  + A S  +  +  G   D   Y+ L+         A+++
Sbjct: 783 GWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQSY 829



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 187/383 (48%), Gaps = 5/383 (1%)

Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           + D  + C   P+V  +  L+   T++G    A ++ + +K+ G   ++  ++  ++  +
Sbjct: 446 VFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFL 505

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           KL +    + ++++    G   +V  +N +I A C    ++ A+ +  +M K    P   
Sbjct: 506 KLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTR 565

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            F  II+   + G++  AL++F    +M     +P   T+N +I G  +  ++  A  I 
Sbjct: 566 TFLPIIHGFARAGEMRRALEIF---DMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAIL 622

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M  AG+  N  TY TL+ GYA  G +E+A +    +   GL  +   Y + +      
Sbjct: 623 DEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKS 682

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G ++ AL V  +M  K+I  + F Y+IL  G  R G V +A  L  Q+ +E ++ D ++Y
Sbjct: 683 GRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTY 742

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              IN  CK+ ++  A +++  M   G+ P++ TY TLI+G+ +    E A+  +E MK 
Sbjct: 743 TSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKL 802

Query: 493 VEKKPNLVIYNSIINGLCKDASL 515
              KP+  +Y+ ++  L   A+ 
Sbjct: 803 AGFKPDKAVYHCLVTSLLSRATF 825



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 219/483 (45%), Gaps = 43/483 (8%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + ++ M + G   + + ++ +I+A      +EEAL    +M + GI   +V +++I+   
Sbjct: 305 QTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGF 364

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLP--NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
            ++G+ + A   F +         LP  N+V +  II   C++  ++ AE +   M + G
Sbjct: 365 AKMGNADAADHWFEE-----AKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQG 419

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           ID  +  Y T++DGY   G+ E+ L + D + + G  P+ + Y   I+     G V  AL
Sbjct: 420 IDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKAL 479

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   M    I  +  TYS+L  G  +      AF +     ++ +  D   YN +I   
Sbjct: 480 EISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAF 539

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C   N+  A  ++  M      P   T+  +I G+ + G +  A+++++ M++    P +
Sbjct: 540 CGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTV 599

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             YN++I GL +   +  A ++L      G+  +  TY TL+ GY   G   +AF  F+ 
Sbjct: 600 HTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTV 659

Query: 559 MRNVGIAVN------------KVG-----------------------YNILINFLCKFGC 583
           +RN G+ ++            K G                       YNILI+   + G 
Sbjct: 660 LRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGD 719

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
             +A +LM+ M   G++PD  TYT+ +    K    ++  E+  +M  SG+ P+ +TY  
Sbjct: 720 VWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTT 779

Query: 644 IIS 646
           +I+
Sbjct: 780 LIN 782



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 154/329 (46%), Gaps = 1/329 (0%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           + Y  ++  Y R G    A +  + M  RG+ P++ VY+S IH      D+E AL  +  
Sbjct: 285 KEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRK 344

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M ++ I     TYSI+  G  + G    A     +  E+    +A  Y  +I   C+  N
Sbjct: 345 MKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICN 404

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ L+  M  +G+   I  Y T++DGY   GN E  + V++ +K+    P+++ Y  
Sbjct: 405 MDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGC 464

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN   K   +  A  + +  +  G+   + TY+ LING+      A AF++F +    G
Sbjct: 465 LINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDG 524

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V YN +I   C  G   +A  +++ M      P   T+  ++  F++       +
Sbjct: 525 LKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRAL 584

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
           E+ D M  SG  P   TYNA+I  L+ ++
Sbjct: 585 EIFDMMRRSGCIPTVHTYNALILGLVEKR 613



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P    Y ++ K   R G +  A +    +    +   ++ Y+ LI+      ++  A   
Sbjct: 282 PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHC 341

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M   G+   I+TY  ++ G+ K GN + A   +E  K+     N VIY  II   C+
Sbjct: 342 VRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQ 401

Query: 512 DASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             ++D A++L++  +  G+   I  Y+T+++GY + G   +   +F  ++  G   + + 
Sbjct: 402 ICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVIS 461

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LIN   K G   +A E+ K+M + GI  +  TY+ L+  F K         + +D  
Sbjct: 462 YGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT 521

Query: 631 LSGVSPDNQTYNAIISPLLG 650
             G+ PD   YN II+   G
Sbjct: 522 KDGLKPDVVLYNNIITAFCG 541


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 168/628 (26%), Positives = 275/628 (43%), Gaps = 98/628 (15%)

Query: 54  MAPSLTNSLVNRVVSEFRKSPKLALEFYTWV-GENNRFSH--SLESSCAIVHLLVNWRRF 110
           M  SL  +L+         +P+LA   +  +    +  SH  SL+++  I  +LV  +  
Sbjct: 1   MEQSLVKALLKNT-----NNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMH 55

Query: 111 DDA-----LLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGA 165
           ++      L+L  ++      S L  +     S  I KA P     LVR+          
Sbjct: 56  EEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF--QLVRS---------- 103

Query: 166 YDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYA 225
                  +   +  S++ +N  L   +K   +     LYK+MV CG      TFNL+I A
Sbjct: 104 -------RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRA 156

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSV 285
           LC    ++ A  L+  M + G  PN   F +++   C+ G  +  L+L   +  M    V
Sbjct: 157 LCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL---LNAMESFGV 213

Query: 286 LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
           LPN V +N I++ FC+ GR + +E++   M + G+                         
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL------------------------- 248

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM-IDKHIC---PDHFTYSILT 401
                     +P+ V +NS I  L  EG V  A  + SDM +D+++    P+  TY+++ 
Sbjct: 249 ----------VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
           KG C+ G ++ A  L   + E   +    SYNI +  L +      A+ +L  M  +G+ 
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           P I +Y  L+DG CK G +  A  +   MK+    P+ V Y  +++G C    +DAAKSL
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418

Query: 522 LQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           LQ   R   L +A T N L++  +  G+I+EA  +  +M   G  ++ V  NI+++ LC 
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478

Query: 581 FGCYQQARELMKVMILHG-----------------------IIPDYVTYTTLVTRFSKNC 617
            G   +A E++K M +HG                        +PD +TY+TL+    K  
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAII 645
              E   L  +M+   + PD+  YN  I
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFI 566



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 255/534 (47%), Gaps = 20/534 (3%)

Query: 129 LEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           +EF+  L     +C   P    F+ L+RA       + A ++  ++  KG   +   +  
Sbjct: 128 VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGI 187

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +    K     +  +L   M S G + N   +N ++ + C+E + +++  +  +M + G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL----PNSVTHNCIINGFCKL 302
           + P++V FN  I+  C+ G +  A ++F  M +   D  L    PNS+T+N ++ GFCK+
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMEL---DEYLGLPRPNSITYNLMLKGFCKV 304

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           G +E A+ +  ++ +     ++++Y   + G  R G   EA  +  +M  +G+ P+   Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  +  L   G +  A  ++  M    +CPD  TY  L  G C  G V  A  L  +++ 
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
            + + +AY+ NIL++ L K   ++ A++LL  M  +G   D +T   ++DG C  G ++ 
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLING 542
           A+++ + M+         + NS I GL  D       SL++ +    L D ITY+TL+NG
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYI-GLVDD-------SLIENN---CLPDLITYSTLLNG 533

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G+ AEA  +F+EM    +  + V YNI I+  CK G    A  ++K M   G    
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593

Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             TY +L+          E+  L D+M   G+SP+  TYN  I  L   +  ED
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 130/558 (23%), Positives = 241/558 (43%), Gaps = 70/558 (12%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EICKATPAVFDALVRACT 157
            +V  +V +     AL   G ++ A+ +    F +  LD Y  + +     ++ +++   
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRI----FSDMELDEYLGLPRPNSITYNLMLKGFC 302

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           ++G  E A  + + ++      S+ ++N +L  LV+  +      + K+M   G   ++ 
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR-- 275
           ++N+++  LCK   L +A ++   M ++G+ P+ V +  +++  C VG ++ A  L +  
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422

Query: 276 --------------------KMGVMSGDSVLP----------NSVTHNCIINGFCKLGRV 305
                               KMG +S    L           ++VT N I++G C  G +
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482

Query: 306 EFAEEIRYAMIKAGI---------------------DC--NVRTYATLIDGYARGGSSEE 342
           + A EI   M   G                      +C  ++ TY+TL++G  + G   E
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           A  L  EM+   L P++V YN  IH    +G +  A  VL DM  K       TY+ L  
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602

Query: 403 GLCRNGCVKQAFKLH---NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           GL   G   Q F++H   +++ E+ +  +  +YN  I YLC+   +  A  LL  M+ + 
Sbjct: 603 GL---GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV-EKKPNLVIYNSIINGLCKDASLDAA 518
           + P++ ++  LI+ +CK  + + A +V+E    +  +K  L  Y+ + N L     L  A
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMFNELLAAGQLLKA 717

Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             LL+A    G  L    Y  L+       ++  A  +  +M + G   +      +I+ 
Sbjct: 718 TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDG 777

Query: 578 LCKFGCYQQARELMKVMI 595
           L K G  ++A      M+
Sbjct: 778 LGKMGNKKEANSFADKMM 795



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 8/248 (3%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A+N F+ H  K  +I   +++ K+M   G  +++ T+N +I  L  + ++ E   L   M
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
            + GI PN+  +N  I   C+   +E A  L  +M      ++ PN  +   +I  FCK+
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM---MQKNIAPNVFSFKYLIEAFCKV 677

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRT--YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
              + A+E+    +     C  +   Y+ + +     G   +A  L + ++ RG      
Sbjct: 678 PDFDMAQEVFETAVSI---CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +Y   +  L  + ++E A  +L  MID+    D      +  GL + G  K+A    +++
Sbjct: 735 LYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794

Query: 421 LEEHMVGD 428
           +E   VG+
Sbjct: 795 MEMASVGE 802



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 54/121 (44%)

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           YN L+       ++     ++ +M   GIA     +N+LI  LC   C   AREL   M 
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
             G  P+  T+  LV  + K    ++ +EL + M   GV P+   YN I+S    E   +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234

Query: 656 D 656
           D
Sbjct: 235 D 235


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 226/466 (48%), Gaps = 15/466 (3%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           +VK+        L K + S G   +V T  ++I  LC         S+   M K G+ P 
Sbjct: 81  IVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPT 140

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV F  +IN  C  G++  A +    +  M   S   NS T+  IING CK G    A  
Sbjct: 141 VVTFATLINGLCAEGNVARAARFADSLEDMGHQS---NSYTYGAIINGLCKAGDTSGA-- 195

Query: 311 IRYAMIKAGIDCN---VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           I Y     G +C+   V  Y+T++D   + G   EAL L   M  +G+ P+ V YNS IH
Sbjct: 196 ILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIH 255

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G  + A  +L +M+ K I P+  T+++L    C++G + +A  +   ++   +  
Sbjct: 256 GLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEP 315

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +YN +I+  C  + +  A ++   MI +G +P+++TY +LI G+CK  NI  A+ + 
Sbjct: 316 DVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLL 375

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL----QASQRIGLLDAITYNTLINGY 543
             M      P++V ++++I G CK    +AAK L     +  Q   L    T   +++G 
Sbjct: 376 GEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQ---TCAIILDGL 432

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
           F     +EA ++F EM  + + +N V YNI+++ +C FG    A+EL   +   GI  D 
Sbjct: 433 FKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDV 492

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           V YTT++    K    ++   L   M  +G  P+  TYN  +  LL
Sbjct: 493 VAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLL 538



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 207/441 (46%), Gaps = 3/441 (0%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G    V TF  +I  LC E  +  A      +   G   N   +  IIN  C+ GD
Sbjct: 132 MFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGD 191

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
              A+    K+   + D  L   + ++ I++  CK G V  A  +   M   GI  ++  
Sbjct: 192 TSGAILYLEKIKGRNCD--LDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVA 249

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y +LI G    G  +EA  L   M+++G+MPN   +N  +     +G +  A  ++  M+
Sbjct: 250 YNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMV 309

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
              + PD  TY+ +  G C    +  A K+   ++ +  + +  +Y+ LI+  CK+ N+ 
Sbjct: 310 HVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNIN 369

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  LL  M+  GL PD++T+ TLI G+CK G  E A +++  M + ++ PNL     I+
Sbjct: 370 KALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIIL 429

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +GL K      A SL +  +++ L L+ + YN +++G    GK+ +A  +FS + + GI 
Sbjct: 430 DGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIK 489

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           ++ V Y  +I  LCK G    A  L+  M  +G +P+  TY   V    +        + 
Sbjct: 490 IDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKY 549

Query: 626 HDDMVLSGVSPDNQTYNAIIS 646
              M   G+S D  T   +IS
Sbjct: 550 LLLMKGKGLSADATTTELLIS 570



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 210/436 (48%), Gaps = 5/436 (1%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI-GRFWKL 203
           T   F  L+      G    A      L+  GH  + + +   ++ L K  +  G    L
Sbjct: 140 TVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYL 199

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
            K       ++ V  ++ ++ +LCK+  + EAL+L+  M   GI P++V +N +I+  C 
Sbjct: 200 EKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCN 259

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G  + A  L   +G M    ++PN  T N +++ FCK G +  A+ I   M+  G++ +
Sbjct: 260 FGRWKEATTL---LGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPD 316

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V TY ++I G+       +A+++ + M+ +G +PN V Y+S IH      ++  ALF+L 
Sbjct: 317 VVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLG 376

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M++  + PD  T+S L  G C+ G  + A +L   + E     +  +  I+++ L K  
Sbjct: 377 EMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQ 436

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
             + A  L   M    L  +++ Y  ++DG C  G +  A +++  +     K ++V Y 
Sbjct: 437 FHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYT 496

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I GLCK+  LD A++LL   +  G L +  TYN  + G      I+ +      M+  
Sbjct: 497 TMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGK 556

Query: 563 GIAVNKVGYNILINFL 578
           G++ +     +LI++ 
Sbjct: 557 GLSADATTTELLISYF 572



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 212/447 (47%), Gaps = 10/447 (2%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKL 172
           A L+ G     N      F + L D     ++    + A++    + G T GA   ++K+
Sbjct: 145 ATLINGLCAEGNVARAARFADSLEDMGH--QSNSYTYGAIINGLCKAGDTSGAILYLEKI 202

Query: 173 KVKGHSVSIH-AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
           K +   + +  A++  +  L K   +     L+  M S G   ++  +N +I+ LC   +
Sbjct: 203 KGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGR 262

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
            +EA +L   M++ GI PNV  FN++++  C+ G +  A  +   MG M    V P+ VT
Sbjct: 263 WKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTI---MGFMVHVGVEPDVVT 319

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           +N +I+G C L ++  A ++   MI  G   N+ TY++LI G+ +  +  +AL L  EMV
Sbjct: 320 YNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMV 379

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGA--LFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
             GL P+ V +++ I      G  E A  LF      D+H  P+  T +I+  GL +   
Sbjct: 380 NSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQH--PNLQTCAIILDGLFKCQF 437

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
             +A  L  ++ + ++  +   YNI+++ +C    L  A++L S +  +G+  D++ Y T
Sbjct: 438 HSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTT 497

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           +I G CK G ++ A  +   M++    PN   YN  + GL +   +  +   L   +  G
Sbjct: 498 MIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKG 557

Query: 530 LLDAITYNTLINGYFINGKIAEAFAMF 556
           L    T   L+  YF   K   A  +F
Sbjct: 558 LSADATTTELLISYFSANKENSALHVF 584



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 175/384 (45%), Gaps = 5/384 (1%)

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E AL  F KM VM+    LP       +     K+        +   +   GI  +V T 
Sbjct: 53  EAALSFFHKMVVMNP---LPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTL 109

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I+       +     +   M K G+ P  V + + I+ L AEG+V  A      + D
Sbjct: 110 TIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLED 169

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY-SYNILINYLCKSNNLA 446
                + +TY  +  GLC+ G    A     ++   +   D   +Y+ +++ LCK   + 
Sbjct: 170 MGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVC 229

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A  L S M  +G+ PD++ Y +LI G C  G  + A  +  NM +    PN+  +N ++
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLV 289

Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           +  CKD  +  AK+++     +G+  D +TYN++I+G+ +  ++ +A  +F  M + G  
Sbjct: 290 DNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFL 349

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N V Y+ LI+  CK     +A  L+  M+  G+ PD VT++TL+  F K   PE   EL
Sbjct: 350 PNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKEL 409

Query: 626 HDDMVLSGVSPDNQTYNAIISPLL 649
              M      P+ QT   I+  L 
Sbjct: 410 FCTMHEHDQHPNLQTCAIILDGLF 433



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 2/325 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N    A  +D      S E AL    +MV    +P    +      +         + ++
Sbjct: 35  NFTNRAQFLDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLI 94

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             +    I PD +T +I+   LC        F +   + +  +     ++  LIN LC  
Sbjct: 95  KHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAE 154

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI- 501
            N+A A +   S+   G   +  TYG +I+G CK G+  GA+   E +K      ++VI 
Sbjct: 155 GNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIA 214

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y++I++ LCKD  +  A +L       G+  D + YN+LI+G    G+  EA  +   M 
Sbjct: 215 YSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMM 274

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             GI  N   +N+L++  CK G   +A+ +M  M+  G+ PD VTY ++++         
Sbjct: 275 RKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMG 334

Query: 621 EVIELHDDMVLSGVSPDNQTYNAII 645
           + +++ + M+  G  P+  TY+++I
Sbjct: 335 DAVKVFELMIHKGFLPNLVTYSSLI 359



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 22/359 (6%)

Query: 99  AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV-RACT 157
           +++H L N+ R+ +A  L+GN+M    +  ++    L+D++  CK      D ++ RA T
Sbjct: 252 SLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF--CK------DGMISRAKT 303

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
            +G               G    +  +N+ +S    L+++G   K+++ M+  G++ N+ 
Sbjct: 304 IMGFMVHV----------GVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLV 353

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T++ +I+  CK   + +AL L   M+ SG+ P+VV ++ +I   C+ G  E A +LF   
Sbjct: 354 TYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELF--- 410

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M      PN  T   I++G  K      A  +   M K  ++ NV  Y  ++DG    
Sbjct: 411 CTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSF 470

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G   +A  L   +  +G+  + V Y + I  L  EG ++ A  +L  M +    P+ FTY
Sbjct: 471 GKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTY 530

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           ++  +GL +   + ++ K    +  + +  DA +  +LI+Y   +   +A    L   +
Sbjct: 531 NVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKENSALHVFLQEFV 589


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 222/441 (50%), Gaps = 10/441 (2%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  TF  V+  LC   ++ +AL +   M   G  P    +++I+  AC+ G    ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
                M       ++   N ++N  C+ G V+ A  +   +   G + ++ +Y  ++ G 
Sbjct: 170 E---AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 335 A---RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
               R G  EE   L DEMV+    PN V +N+ I +L   G  E    VL+ M +    
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD   Y+ +  G+C+ G ++ A ++ N++    +  +   YN ++  LC +     A++L
Sbjct: 284 PDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEEL 343

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           LS M  +    D +T+  L+D +C+ G ++  +++ E M      P+++ Y ++ING CK
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  +D A  LL++    G   + ++Y  ++ G    G+  +A  + S+M   G   N V 
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N LINFLCK G  +QA EL+K M+++G  PD ++Y+T++    K    EE +EL + MV
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 631 LSGVSPDNQTYNAIISPLLGE 651
             G+SP+   Y++I   L  E
Sbjct: 524 NKGISPNTIIYSSIACALSRE 544



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 226/431 (52%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +++++ A C+      ++ +   M   G   +    N+++N  C+ G ++ A+ L RK+ 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
               ++   + V++N ++ G C   R    EE+   M++     N+ T+ TLI    R G
Sbjct: 209 FFGCEA---DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E    +  +M + G  P+  +Y + I  +  EG +E A  +L+ M    + P+   Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            + KGLC     K+A +L +++ ++    D  ++NIL+++ C++  +    +LL  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDA 517
           G +PD+ITY T+I+G+CK G I+ AV + ++M     KPN V Y  ++ GLC     +DA
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            + + Q  Q+    + +T+NTLIN     G + +A  +  +M   G + + + Y+ +I+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L K G  ++A EL+ VM+  GI P+ + Y+++    S+     +VI++ D++  + +  D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 638 NQTYNAIISPL 648
              YNA+IS L
Sbjct: 566 AVLYNAVISSL 576



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 5/446 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C Q G  + A  +++KL   G    I ++N  L  L      G   +L  EMV      N
Sbjct: 192 CEQ-GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           + TFN +I  LC+    E    +  +M + G  P++  +  II+  C+ G LE A ++  
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M       + PN V +N ++ G C   R + AEE+   M +     +  T+  L+D + 
Sbjct: 311 RM---PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFC 367

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  +  + L ++M+  G MP+ + Y + I+    EG ++ A+ +L  M      P+  
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +Y+I+ KGLC  G    A +L +Q++++    +  ++N LIN+LCK   +  A +LL  M
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           +V G  PD+I+Y T+IDG  K G  E A+++   M      PN +IY+SI   L ++  +
Sbjct: 488 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           +    +    +   +  DA+ YN +I+      +   A   F+ M + G   N+  Y +L
Sbjct: 548 NKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTML 607

Query: 575 INFLCKFGCYQQARELMKVMILHGII 600
           I  L   G  ++A+EL+  +   G +
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 239/506 (47%), Gaps = 6/506 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           LE L+ +  S++ C   P ++  ++ A  + G    +  V++ +  KG ++     N  L
Sbjct: 131 LEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           + + +   +     L +++   G   ++ ++N V+  LC   +  +   L   M++    
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN+V FN +I   C+ G  E   ++   +  MS     P+   +  II+G CK G +E A
Sbjct: 249 PNIVTFNTLIGYLCRNGLFE---RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            EI   M   G+  NV  Y T++ G       +EA  L  EM ++    ++V +N  + +
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G V+  + +L  M+     PD  TY+ +  G C+ G + +A  L   +       +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY I++  LC +     A++L+S MI +G  P+ +T+ TLI+  CK G +E A+++ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            M      P+L+ Y+++I+GL K    + A  LL      G+  + I Y+++       G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ +   MF  +++  I  + V YN +I+ LCK     +A +    M+ +G +P+  TYT
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSG 633
            L+   +     +E  EL  ++   G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 195/434 (44%), Gaps = 42/434 (9%)

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV +N ++   C+ G L  A +L   +       V PN+ T   ++ G C  GR+  A E
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV------PVPPNAYTFFPVVRGLCTRGRIADALE 132

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G       Y  +++   R G    ++R+ + M  +G   +    N  ++ + 
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            +G V+ A+ +L  +       D  +Y+ + KGLC         +L ++++      +  
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           ++N LI YLC++       ++L+ M   G  PDI  Y T+IDG CK G++E A ++   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 491 KKVEKKPNLVIYNSIINGLC-----------------KDASLDAAK-------------- 519
                KPN+V YN+++ GLC                 KD  LD                 
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 520 ----SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
                LL+     G + D ITY T+ING+   G I EA  +   M + G   N V Y I+
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           +  LC  G +  A ELM  MI  G  P+ VT+ TL+    K    E+ IEL   M+++G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 635 SPDNQTYNAIISPL 648
           SPD  +Y+ +I  L
Sbjct: 493 SPDLISYSTVIDGL 506



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 154/336 (45%), Gaps = 4/336 (1%)

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V  Y  ++ GY R G    A RL   +    + PN   +   +  L   G +  AL VL 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K   P    Y ++ +  CR+G  + + ++   +  +    D  + N+++N +C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  LL  +   G   DI++Y  ++ G C         ++ + M +V+  PN+V +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 504 SIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  LC++   +    +L Q S+     D   Y T+I+G    G +  A  + + M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N V YN ++  LC    +++A EL+  M       D VT+  LV  F +N   + V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           IEL + M+  G  PD  TY  +I+    E   ++ V
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 38/289 (13%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ LV    Q G  +   ++++++   G    +  +   ++   K   I    
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L K M SCG   N  ++ +V+  LC   +  +A  L  +M++ G  PN V FN +IN  
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A++L ++M V   +   P+ ++++ +I+G  K G+ E A E+   M+  GI 
Sbjct: 472 CKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDE-------------------------------- 349
            N   Y+++    +R G   + +++ D                                 
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 350 ---MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
              MV  G MPN   Y   I  L +EG  + A  +LS++  +     H 
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 12/233 (5%)

Query: 133 EGLLDSYEI---------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           EGL+D   +         CK     +  +++     G    A +++ ++  +G   +   
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  ++ L K   + +  +L K+M+  G   ++ +++ VI  L K  K EEAL L   M+
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             GI PN + ++ I     + G +   +++F  +      ++  ++V +N +I+  CK  
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNI---KDTTIRSDAVLYNAVISSLCKRW 580

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
             + A +    M+  G   N  TY  LI G A  G ++EA  L  E+  RG +
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 222/441 (50%), Gaps = 10/441 (2%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           N  TF  V+  LC   ++ +AL +   M   G  P    +++I+  AC+ G    ++++ 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
                M       ++   N ++N  C+ G V+ A  +   +   G + ++ +Y  ++ G 
Sbjct: 170 E---AMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 335 A---RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
               R G  EE   L DEMV+    PN V +N+ I +L   G  E    VL+ M +    
Sbjct: 227 CMAKRWGDVEE---LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCT 283

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD   Y+ +  G+C+ G ++ A ++ N++    +  +   YN ++  LC +     A++L
Sbjct: 284 PDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEEL 343

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           LS M  +    D +T+  L+D +C+ G ++  +++ E M      P+++ Y ++ING CK
Sbjct: 344 LSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCK 403

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
           +  +D A  LL++    G   + ++Y  ++ G    G+  +A  + S+M   G   N V 
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +N LINFLCK G  +QA EL+K M+++G  PD ++Y+T++    K    EE +EL + MV
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 631 LSGVSPDNQTYNAIISPLLGE 651
             G+SP+   Y++I   L  E
Sbjct: 524 NKGISPNTIIYSSIACALSRE 544



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 226/431 (52%), Gaps = 4/431 (0%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           +++++ A C+      ++ +   M   G   +    N+++N  C+ G ++ A+ L RK+ 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
               ++   + V++N ++ G C   R    EE+   M++     N+ T+ TLI    R G
Sbjct: 209 FFGCEA---DIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNG 265

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E    +  +M + G  P+  +Y + I  +  EG +E A  +L+ M    + P+   Y+
Sbjct: 266 LFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYN 325

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            + KGLC     K+A +L +++ ++    D  ++NIL+++ C++  +    +LL  M+  
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDA 517
           G +PD+ITY T+I+G+CK G I+ AV + ++M     KPN V Y  ++ GLC     +DA
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445

Query: 518 AKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
            + + Q  Q+    + +T+NTLIN     G + +A  +  +M   G + + + Y+ +I+ 
Sbjct: 446 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 505

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L K G  ++A EL+ VM+  GI P+ + Y+++    S+     +VI++ D++  + +  D
Sbjct: 506 LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSD 565

Query: 638 NQTYNAIISPL 648
              YNA+IS L
Sbjct: 566 AVLYNAVISSL 576



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 5/446 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C Q G  + A  +++KL   G    I ++N  L  L      G   +L  EMV      N
Sbjct: 192 CEQ-GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPN 250

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           + TFN +I  LC+    E    +  +M + G  P++  +  II+  C+ G LE A ++  
Sbjct: 251 IVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILN 310

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M       + PN V +N ++ G C   R + AEE+   M +     +  T+  L+D + 
Sbjct: 311 RM---PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFC 367

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  +  + L ++M+  G MP+ + Y + I+    EG ++ A+ +L  M      P+  
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
           +Y+I+ KGLC  G    A +L +Q++++    +  ++N LIN+LCK   +  A +LL  M
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
           +V G  PD+I+Y T+IDG  K G  E A+++   M      PN +IY+SI   L ++  +
Sbjct: 488 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           +    +    +   +  DA+ YN +I+      +   A   F+ M + G   N+  Y +L
Sbjct: 548 NKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTML 607

Query: 575 INFLCKFGCYQQARELMKVMILHGII 600
           I  L   G  ++A+EL+  +   G +
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRGAL 633



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 239/506 (47%), Gaps = 6/506 (1%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           LE L+ +  S++ C   P ++  ++ A  + G    +  V++ +  KG ++     N  L
Sbjct: 131 LEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVL 188

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           + + +   +     L +++   G   ++ ++N V+  LC   +  +   L   M++    
Sbjct: 189 NAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCA 248

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
           PN+V FN +I   C+ G  E   ++   +  MS     P+   +  II+G CK G +E A
Sbjct: 249 PNIVTFNTLIGYLCRNGLFE---RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            EI   M   G+  NV  Y T++ G       +EA  L  EM ++    ++V +N  + +
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
               G V+  + +L  M+     PD  TY+ +  G C+ G + +A  L   +       +
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
             SY I++  LC +     A++L+S MI +G  P+ +T+ TLI+  CK G +E A+++ +
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            M      P+L+ Y+++I+GL K    + A  LL      G+  + I Y+++       G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ +   MF  +++  I  + V YN +I+ LCK     +A +    M+ +G +P+  TYT
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSG 633
            L+   +     +E  EL  ++   G
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 195/434 (44%), Gaps = 42/434 (9%)

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           VV +N ++   C+ G L  A +L   +       V PN+ T   ++ G C  GR+  A E
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV------PVPPNAYTFFPVVRGLCTRGRIADALE 132

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
           +   M   G       Y  +++   R G    ++R+ + M  +G   +    N  ++ + 
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
            +G V+ A+ +L  +       D  +Y+ + KGLC         +L ++++      +  
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
           ++N LI YLC++       ++L+ M   G  PDI  Y T+IDG CK G++E A ++   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 491 KKVEKKPNLVIYNSIINGLC-----------------KDASLDAAK-------------- 519
                KPN+V YN+++ GLC                 KD  LD                 
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 520 ----SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
                LL+     G + D ITY T+ING+   G I EA  +   M + G   N V Y I+
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           +  LC  G +  A ELM  MI  G  P+ VT+ TL+    K    E+ IEL   M+++G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 635 SPDNQTYNAIISPL 648
           SPD  +Y+ +I  L
Sbjct: 493 SPDLISYSTVIDGL 506



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 154/336 (45%), Gaps = 4/336 (1%)

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           V  Y  ++ GY R G    A RL   +    + PN   +   +  L   G +  AL VL 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAV---PVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M  K   P    Y ++ +  CR+G  + + ++   +  +    D  + N+++N +C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  LL  +   G   DI++Y  ++ G C         ++ + M +V+  PN+V +N
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 504 SIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I  LC++   +    +L Q S+     D   Y T+I+G    G +  A  + + M + 
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+  N V YN ++  LC    +++A EL+  M       D VT+  LV  F +N   + V
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRV 375

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           IEL + M+  G  PD  TY  +I+    E   ++ V
Sbjct: 376 IELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 38/289 (13%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      F+ LV    Q G  +   ++++++   G    +  +   ++   K   I    
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L K M SCG   N  ++ +V+  LC   +  +A  L  +M++ G  PN V FN +IN  
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G +E A++L ++M V   +   P+ ++++ +I+G  K G+ E A E+   M+  GI 
Sbjct: 472 CKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDE-------------------------------- 349
            N   Y+++    +R G   + +++ D                                 
Sbjct: 529 PNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDF 588

Query: 350 ---MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
              MV  G MPN   Y   I  L +EG  + A  +LS++  +     H 
Sbjct: 589 FAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 12/233 (5%)

Query: 133 EGLLDSYEI---------CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
           EGL+D   +         CK     +  +++     G    A +++ ++  +G   +   
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463

Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
           +N  ++ L K   + +  +L K+M+  G   ++ +++ VI  L K  K EEAL L   M+
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523

Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
             GI PN + ++ I     + G +   +++F  +      ++  ++V +N +I+  CK  
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNI---KDTTIRSDAVLYNAVISSLCKRW 580

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
             + A +    M+  G   N  TY  LI G A  G ++EA  L  E+  RG +
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 213/399 (53%), Gaps = 4/399 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           F+ ++ AL +       LSL  R+    I  +V  FN++IN   ++  ++FA  +  K+ 
Sbjct: 87  FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKII 146

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +  +   P++VT + +ING C   +   A E    M+ +G   N+ TY T+I G+ + G
Sbjct: 147 KLGFE---PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
            +  A+ L  +M K G  P+ V+YN+ I  L  +  V  AL + S++  K + PD FTYS
Sbjct: 204 KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
           IL  GLC +   ++A  L N+++  +++ D  ++NIL++ LCK   L+ A+ ++  MI +
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P+  TY +L++GYC    +  A  V++ M      PN+V YN +ING CK   +D A
Sbjct: 324 GVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEA 383

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
           + L       GL+ +   YNTLI+G    G+  EA  +F +M+  G + + V   IL++ 
Sbjct: 384 RELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDS 443

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           LCK G    A  L + M    + P+ VTY  L+    K+
Sbjct: 444 LCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKS 482



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 211/424 (49%), Gaps = 6/424 (1%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           C    +E+AL  +  M+     P +V F+ +++   ++      L L +++ ++     +
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLR----I 115

Query: 287 PNSVTH-NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
              V H N +IN F +L RV+FA  +   +IK G + +  T+++LI+G         A+ 
Sbjct: 116 ERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAME 175

Query: 346 LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
             DEMV  G  PN   YN+ I      G    A+ +L  M      PD   Y+ +  GLC
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235

Query: 406 RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
           ++  V +A  + +++  + +  D ++Y+IL++ LC S+    A  L + M+   ++PD++
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
           T+  L+D  CK G +  A  + + M +   +PN   YNS++NG C    +  A+ +  A 
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 526 QRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
              G + + ++YN LINGY    +I EA  +F EM   G+  N   YN LI+ LC+ G +
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
            +AREL K M   G  PD VT T L+    K    +  + L   M  S + P+  TY+ +
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 645 ISPL 648
           I  +
Sbjct: 476 IRAM 479



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 203/412 (49%), Gaps = 24/412 (5%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           FD L+ A  +I        + +++++      +  +N  ++   +L  +   + +  +++
Sbjct: 87  FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKII 146

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G+  +  TF+ +I  LC E K   A+  +  M+ SG  PN+  +N II   C++G   
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTT 206

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ L +KM    G    P+ V +N II+G CK   V  A +I   +   G+  +V TY+
Sbjct: 207 VAVGLLKKMDKAGGR---PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L+ G       EEA  L +EM+   +MP+ V +N  +  L  EG +  A  ++  MI+K
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY----------SYNILINY 438
            + P++ TY+ L  G C          L N+V E  MV DA           SYNILIN 
Sbjct: 324 GVEPNYATYNSLMNGYC----------LQNKVFEARMVFDAMITKGCMPNVVSYNILING 373

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
            CK+  +  A++L   M  RGLIP+   Y TLI G C+ G    A +++++M+     P+
Sbjct: 374 YCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPD 433

Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
           LV    +++ LCK   LD A  L +A Q   L  + +TY+ LI   + +GKI
Sbjct: 434 LVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 5/277 (1%)

Query: 134 GLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
           GLL   +     P   +++ ++    +      A D+  ++K KG    +  ++  +  L
Sbjct: 210 GLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGL 269

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
              ++      L+ EM+S   + +V TFN+++  LCKE  L EA  +   M++ G+ PN 
Sbjct: 270 CNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNY 329

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             +N ++N  C    +  A  +F  M +  G   +PN V++N +ING+CK  R++ A E+
Sbjct: 330 ATYNSLMNGYCLQNKVFEARMVFDAM-ITKG--CMPNVVSYNILINGYCKAQRIDEAREL 386

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M   G+  N   Y TLI G  + G   EA  L  +M  +G  P+ V     +  L  
Sbjct: 387 FDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCK 446

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            G ++ AL +   M D  + P+  TY IL + + ++G
Sbjct: 447 LGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 110/279 (39%), Gaps = 36/279 (12%)

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           ++E ALF  + MI KH  P    +  L   L R         L  ++    +  D + +N
Sbjct: 64  NIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
           ILIN   +   +  A  +L  +I  G                                  
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGF--------------------------------- 150

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEA 552
             +P+ V ++S+INGLC +     A          G    + TYNT+I G+   GK   A
Sbjct: 151 --EPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVA 208

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             +  +M   G   + V YN +I+ LCK     +A ++   +   G+ PD  TY+ L+  
Sbjct: 209 VGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHG 268

Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
              +   EE   L ++M+   + PD  T+N ++  L  E
Sbjct: 269 LCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKE 307



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 1/218 (0%)

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C   N+  A    + MI +  +P I+ +  L+    +  +    + + + ++ +  + ++
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             +N +IN   +   +D A S+L    ++G   DA+T+++LING     K A A   F E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G   N   YN +I   CK G    A  L+K M   G  PD V Y T++    K+  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             E +++  ++   GV PD  TY+ ++  L      E+
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEE 277



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/126 (20%), Positives = 60/126 (47%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      ++ L+    +    + A ++  ++  +G   +   +N  +S L +        
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L+K+M + G   ++ T  +++ +LCK   L+ AL L+  M  S + PN+V ++++I   
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 262 CQVGDL 267
            + G +
Sbjct: 480 YKSGKI 485


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 219/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++H L   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  + +K     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + CGY  ++  FN+++++  KE ++  A S++  + K  + P+VV FN ++N   ++G
Sbjct: 126 ESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V  +  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ +    + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL P+I TY  +I+ +C+ G++   +++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVV 417



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    EG++  A  V   +    + P   +++ L  G  + G + + F+L N + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK++ +  A +L   M+  GL+P+ +T+ TLIDG+CK   ++
Sbjct: 199 ASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A+ L+      GL  D ITY TLI
Sbjct: 259 VAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           P+  TYT ++  F +       ++L  +M   G  P
Sbjct: 379 PEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMP 414



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 151/294 (51%), Gaps = 7/294 (2%)

Query: 316 IKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDV 375
           ++ G   ++  +  L+  + + G    A  + D + K  L P+ V +N+ ++     GD+
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDL 187

Query: 376 EGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
           +    + + M    +  D +TYS+L  GLC+   +  A +L +++L+  +V +  ++  L
Sbjct: 188 DEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTL 247

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  + + M     
Sbjct: 248 IDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307

Query: 496 KPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
           KP+ + Y ++I+G CK+  L+ A    K +++ + R   LD + Y  LI+G    G+  +
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR---LDDVAYTALISGLCQEGRSVD 364

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           A  M  EM +VG+      Y ++IN  C+ G      +L+K M   G +P  VT
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 129/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + + LE       Y +NIL++   K   +  A+ +  ++    L P ++++ TL
Sbjct: 118 KLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY K G+++   ++   M+    + ++  Y+ +INGLCK + +D A  L       GL
Sbjct: 178 MNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  N ++  A  ++ +M +  ++ + + YN LI  LCK G  +QA++
Sbjct: 238 VPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL     + G ++ A  + + + +  +     S+N L+N   K  +L    +L ++
Sbjct: 137 YFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G+  D+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDVAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G  + A E  K MI   I  D V YT L++   +     +  ++  +M+  
Sbjct: 316 TLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ P+  TY  II+
Sbjct: 376 GLKPEIGTYTMIIN 389



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 57/285 (20%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I++LC    L  AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVYENMKKVEKK-----------------------------------P 497
            Y + G +  A++ Y  +K+ + +                                    
Sbjct: 75  AYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA 134

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
           +L  +N +++   K+  +  A+S+  A  +  L  ++ ++NTL+NGY   G + E F + 
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLK 194

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           + M+  G+  +   Y++LIN LCK      A EL   M+ +G++P+ VT+TTL+    KN
Sbjct: 195 NAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKN 254

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE---KSAEDQV 658
              +  +E++  M+   +SPD  TYN +I  L  +   K A+D +
Sbjct: 255 RRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLI 299


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 249/521 (47%), Gaps = 9/521 (1%)

Query: 133  EGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
            E + +    C  +P    ++ L++  ++ G  + A  ++ ++  KG    +   N+ ++ 
Sbjct: 500  EDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINT 559

Query: 191  LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
            L K   +   WK++  + +      V T+N+++  L KE K+ +AL L+  M +SG  PN
Sbjct: 560  LYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPN 619

Query: 251  VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
             + FN +++   +   ++ ALK+F +M +M+ +   P+ +T+N II G  + GR+++A  
Sbjct: 620  TITFNSLLDCLSKNDAVDLALKMFCRMTMMNCN---PDVLTYNTIIYGLIREGRIDYAFW 676

Query: 311  IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWL 369
              + M K  +  +  T  TLI G  R G  E+A+++  E V +  L  N+  +   +  +
Sbjct: 677  FFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECI 735

Query: 370  FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
              E ++E A+     ++   +C D      L K LC+      A  + ++  +   +   
Sbjct: 736  LTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPT 795

Query: 430  Y-SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              SYN L++ L  SN    A +L   M   G  P+  TY  L+D + K   I     +Y 
Sbjct: 796  LESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYS 855

Query: 489  NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFING 547
             M+    +PN + +N II+ L K  +L+ A  L              TY  LI+G    G
Sbjct: 856  EMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAG 915

Query: 548  KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
            +  +A  +F EM + G   N V YNILIN   K G    A EL K M+  GI PD  +YT
Sbjct: 916  RSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYT 975

Query: 608  TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             LV         +E ++  +++ L+G+ PD  +YN II+ L
Sbjct: 976  ILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 248/525 (47%), Gaps = 14/525 (2%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  K +   + AL+ A  + G T    ++++++K  G   +I+ +   +  L +   I  
Sbjct: 229 EGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDD 288

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            W ++KEM   G   +V T+ ++I ALC   KL++A  LY +M  S   P+ V +  +++
Sbjct: 289 AWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMD 348

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           +  +VGDLE   + + +M V   D   P+ VT+  +I   CK G V+ A ++   M   G
Sbjct: 349 KFGKVGDLETVKRFWNEMEV---DGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N+ TY T+I G  +    +EAL L + M   G+ P    Y   I +    GD   A+
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M  + I P     +     L   G + +A  + N + +  +  D+ +YN+L+   
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K+  +  A QLLS MI +G  PD++   +LI+   K G ++ A +++  +K ++  P +
Sbjct: 526 SKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV 585

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN ++ GL K+  +  A  L  +    G   + IT+N+L++    N  +  A  MF  
Sbjct: 586 VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG----IIPDYVTYTTLVTRFS 614
           M  +    + + YN +I     +G  ++ R        H     + PDYVT  TL+    
Sbjct: 646 MTMMNCNPDVLTYNTII-----YGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVV 700

Query: 615 KNCSPEEVIELHDDMVLSG-VSPDNQTYNAIISPLLGEKSAEDQV 658
           ++   E+ I++  + V    +  ++Q +  ++  +L E   E+ +
Sbjct: 701 RHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAI 745



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 230/487 (47%), Gaps = 23/487 (4%)

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K K    SVS       L  +   N    ++K+  ++ +  +V   +  N ++  L ++ 
Sbjct: 88  KRKKNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTN--FVHTTDACNYMLEILREQR 145

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV----GDLEFALKLFRKMGVMSGDSVL 286
           ++E+ + ++  M K  I+ N+  + M I +A  +    G   FAL+   ++G       +
Sbjct: 146 RIEDMVFVFDLMQKKVIYRNLTTY-MTIFKALSIKGGIGRAPFALRKMTEVGF------I 198

Query: 287 PNSVTHNCIIN----GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
            N+ ++N +I+    GFC       A ++   MI  G+  +++TY+ L+    R G + +
Sbjct: 199 LNAYSYNGLIHLLLPGFCNE-----ALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRK 253

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
            + L +EM   GL PN   Y   I  L     ++ A  +  +M D+   PD  TY++L  
Sbjct: 254 IMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLID 313

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
            LC  G + +A +L+ ++       D  +Y  L++   K  +L   K+  + M V G  P
Sbjct: 314 ALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAP 373

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D++TY  LI+  CK G+++ A  + + M      PNL  YN++I GL K   LD A  LL
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433

Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  + +G+   A +Y   I+ Y  +G  A+A   F  M+  GI  +    N  +  L + 
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAET 493

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +A ++   +   G+ PD VTY  L+  +SK    ++  +L  +M+  G  PD    
Sbjct: 494 GRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMII 553

Query: 642 NAIISPL 648
           N++I+ L
Sbjct: 554 NSLINTL 560



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 182/388 (46%), Gaps = 3/388 (0%)

Query: 229  ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
            E ++EEA+S    ++ + +  +      +I   C+      A  +F K     G  + P 
Sbjct: 738  EAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLG--IHPT 795

Query: 289  SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
              ++NC+++G       E A E+   M  AG   N  TY  L+D + +     +   L  
Sbjct: 796  LESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYS 855

Query: 349  EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
            EM  RG  PN + +N  I  L    ++  AL +  +++     P   TY  L  GL + G
Sbjct: 856  EMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAG 915

Query: 409  CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
              +QA K+  ++L+     ++  YNILIN   KS  +  A +L   M+  G+ PD+ +Y 
Sbjct: 916  RSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYT 975

Query: 469  TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
             L++  C  G I+ AVQ +E +K     P+ V YN IINGL K   LD A SL    +  
Sbjct: 976  ILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNR 1035

Query: 529  GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
            G+  D  TYN LI    I GK+  A  M+ E++ VG+  +   YN LI      G   QA
Sbjct: 1036 GISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQA 1095

Query: 588  RELMKVMILHGIIPDYVTYTTLVTRFSK 615
              + K M++ G  P+  T+  L  ++ +
Sbjct: 1096 FSVFKKMMVVGCSPNTETFAQLPNKYPR 1123



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 4/345 (1%)

Query: 211  GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
            G    + ++N ++  L      E+AL L+  M  +G  PN   +N++++   +   +   
Sbjct: 791  GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN-- 848

Query: 271  LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
             KL+     M      PN++THN II+   K   +  A ++ Y ++         TY  L
Sbjct: 849  -KLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPL 907

Query: 331  IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
            IDG  + G SE+A+++ +EM+  G  PN+V+YN  I+     G+++ A  +   M+ + I
Sbjct: 908  IDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGI 967

Query: 391  CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
             PD  +Y+IL + LC  G + +A +   ++    +  D  SYN +IN L KS  L  A  
Sbjct: 968  RPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALS 1027

Query: 451  LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
            L S M  RG+ PD+ TY  LI      G ++ AV++YE ++ V  +P++  YN++I G  
Sbjct: 1028 LFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHS 1087

Query: 511  KDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFA 554
               + D A S+ +    +G   +  T+  L N Y   G +   F 
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFG 1132



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 129/570 (22%), Positives = 252/570 (44%), Gaps = 75/570 (13%)

Query: 158 QIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN 217
           ++G  E       +++V G++  +  +   +  L K  ++ R + +   M + G   N++
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLH 411

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N +I  L K  +L+EAL L   M   G+ P    + + I+   + GD   A+  F   
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFE-- 469

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
             M    ++P+    N  +    + GR+  AE+I   + K G+  +  TY  L+  Y++ 
Sbjct: 470 -TMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKA 528

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTY 397
           G  ++A +L  EM+ +G  P+ ++ NS I+ L+  G V+ A  +   + +  + P   TY
Sbjct: 529 GQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTY 588

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM-- 455
           +IL  GL + G + +A +L   + E     +  ++N L++ L K++ +  A ++   M  
Sbjct: 589 NILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTM 648

Query: 456 ------------IVRGLI--------------------PDIITYGTLIDGYCKGGNIEGA 483
                       I+ GLI                    PD +T  TLI G  + G +E A
Sbjct: 649 MNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDA 708

Query: 484 VQVY-----------------ENMK------KVEKK---PNLVIYNSI----------IN 507
           ++V                  E M+      ++E+      +++ NS+          I 
Sbjct: 709 IKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIK 768

Query: 508 GLCK-DASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
            LCK   +LDA     + ++ +G+   + +YN L++G   +    +A  +F +M++ G  
Sbjct: 769 VLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTH 828

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   YN+L++   K     +  +L   M   G  P+ +T+  +++   K+ +  + ++L
Sbjct: 829 PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           + +++    SP   TY  +I  LL    +E
Sbjct: 889 YYELMSGDFSPTPCTYGPLIDGLLKAGRSE 918



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 49/101 (48%)

Query: 165  AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
            A  +  ++K +G S  ++ +N  + HL    ++    K+Y+E+   G   +V T+N +I 
Sbjct: 1025 ALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIR 1084

Query: 225  ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
                    ++A S++ +M+  G  PN   F  + N+  + G
Sbjct: 1085 GHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 230/483 (47%), Gaps = 5/483 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK +   F  ++ A    G    A  + + ++  G S ++  +N  +S   K  ++ +  
Sbjct: 344 CKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQAN 403

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            LY+EM   G   +  TFN+++    K  K  ++  L+     S + P+   +++ +   
Sbjct: 404 MLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGL 463

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C  G L+ A++       M    + P+ V  N +I  + + G  + A +    M+  G+ 
Sbjct: 464 CWAGQLDEAMQFLED---MLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLV 520

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +  T ++++ G ++ G  +EA  L  +M+ +GL  N V +   +   F  GD  GA  +
Sbjct: 521 PSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSL 580

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
             +M  + ICPD   +S    GL + G V++A++  +++ ++  V + + YN LI+ LC 
Sbjct: 581 WYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCN 640

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
              L  A +L   M  +GL+PDI T   +I+G+CK G ++ A   +  M  +   P+ V 
Sbjct: 641 CGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVT 700

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN++I G CK   + +A   L      G   D  TYN  I G+  + KI+ A  M  E+ 
Sbjct: 701 YNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELI 760

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
            VG+  N V YN ++N +C      +A  L   ++    +P+ VT   L++ F K   PE
Sbjct: 761 AVGVVPNTVTYNTMMNAVCT-DMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPE 819

Query: 621 EVI 623
           + +
Sbjct: 820 KAL 822



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 168/682 (24%), Positives = 284/682 (41%), Gaps = 91/682 (13%)

Query: 43  LRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVH 102
           ++Q K  IL+  +       + +++ +  +S + A  F+    +N+    ++ S C   H
Sbjct: 106 IKQGKGYILKSFSQKFCPFFLVKIM-KLLESRQSAFAFFKLAFQNDS-DATVHSCCIAAH 163

Query: 103 LLVNWRRFDDALLLMGNLMS--------ANSVSPLEFLEGLLDSYEICKATPAVFDALVR 154
           +L      +   LL  +++S        + S   +EF+      YE   +  ++ + L+R
Sbjct: 164 ILAA----ESLQLLAQDVISWVIRRIGASRSAHLVEFMWANHHKYE---SDFSILNTLMR 216

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
                     + +++ +++  G   S  A +     L+++ + G  WKL + M+  G   
Sbjct: 217 GFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRP 276

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
             + FN++I   C++  L  A SL + M K    P+V  +N++IN     G    AL   
Sbjct: 277 CNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFL 336

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
               +M  +   P+ +T + II  FC  G V  A +I   + + G+  NV  Y TL+ GY
Sbjct: 337 H---LMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGY 393

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            +     +A  L +EM  +G+ P+   +N  +   +  G    +  +  D     + PD 
Sbjct: 394 FKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDC 453

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHM---------VGDAYS-----------YNI 434
             Y +   GLC  G + +A +    +LE+ M         V  AYS           Y I
Sbjct: 454 SLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKI 513

Query: 435 LINY---------------LCKSNNLAAAKQLLSSMI----------------------- 456
           ++ +               L K   L  A+ LL  MI                       
Sbjct: 514 MLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGD 573

Query: 457 ------------VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
                        RG+ PD I +   IDG  K G +E A + +  M K    PN  +YNS
Sbjct: 574 TAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNS 633

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+GLC    L  A  L +  ++ GLL D  T N +ING+   G++  AF  F+EM ++G
Sbjct: 634 LIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIG 693

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V YN LI   CK      A E +  M   G  PD  TY   +  F  +      +
Sbjct: 694 VTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAV 753

Query: 624 ELHDDMVLSGVSPDNQTYNAII 645
            + D+++  GV P+  TYN ++
Sbjct: 754 TMLDELIAVGVVPNTVTYNTMM 775



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 45/399 (11%)

Query: 137 DSYEICK------ATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           DSYE+ +        P  +++D  V      G  + A   ++ +  KG   S+ A+N+ +
Sbjct: 436 DSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVI 495

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
           +   +        K YK M+  G V + +T + ++  L K+ +L+EA  L Y+M+  G+ 
Sbjct: 496 AAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLP 555

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
            N V F ++++   +VGD   A  L+ +M       + P+++  +  I+G  K G VE A
Sbjct: 556 VNKVAFTVLLDGYFKVGDTAGAHSLWYEM---EARGICPDAIAFSAFIDGLSKAGLVEEA 612

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
            E    M K G   N   Y +LI G    G   EAL+L  EM ++GL+P+    N  I+ 
Sbjct: 613 YEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIING 672

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
              EG ++ A    ++M    + PD  TY+ L  G C+   +  A +  N++       D
Sbjct: 673 FCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPD 732

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD------------------------- 463
             +YNI I   C S  ++ A  +L  +I  G++P+                         
Sbjct: 733 ITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTDMLDRAMVLTAK 792

Query: 464 ---------IITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
                    ++T   L+  +CK G  E A+   + + K+
Sbjct: 793 LLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQKLNKL 831



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 15/295 (5%)

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           RG M + + Y S              L +LS M +  + P     SIL + L R G    
Sbjct: 216 RGFMNSEMAYES--------------LEILSRMREVGVRPSSSAISILFRLLLRVGDYGS 261

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
            +KL   ++ +      +++NI+I   C+   L  A+ LL  M      PD+  Y  LI+
Sbjct: 262 VWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILIN 321

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
            Y   G    A+     M K   KP+L+ +++II   C + ++  A+ + +  Q +GL  
Sbjct: 322 AYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSP 381

Query: 533 AIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
            +  YNTL++GYF    + +A  ++ EMR+ GIA +   +NIL+    K+G    + EL 
Sbjct: 382 NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELF 441

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +   L  ++PD   Y   V         +E ++  +DM+  G+ P    +N++I+
Sbjct: 442 RDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIA 496


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 148/568 (26%), Positives = 270/568 (47%), Gaps = 48/568 (8%)

Query: 63  VNRVVSEF-RKSPKLALEFYTWVGENNRFSHSLESSCA--------IVHLLVNWRRFDDA 113
           +NR +S+  R SP +A+  +      NR   +  +S A        ++       R D A
Sbjct: 65  LNRALSDVARASPAVAISLF------NRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLA 118

Query: 114 LLLMGNLMSAN-SVSPLEF---LEGLLDSYEICKATPAVFDALVRACTQIG--------- 160
              +G +++    +SP+ F   L+GL D     + T    D ++R   ++G         
Sbjct: 119 FATVGRVITTGLRMSPILFSPLLKGLCDR----RRTSDAMDIVLRRMPELGCKPDLFSYT 174

Query: 161 ----------ATEGAYDVIQKLKV-KGH-SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
                      ++ A D++  +   KG   + + A+   ++ L++  ++ + + L+  M+
Sbjct: 175 ILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAML 234

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   +V T++ +I AL K   +++A  ++ RM+K+G+ P+ + +  +++  C  G  +
Sbjct: 235 DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPK 294

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ +F+KM       V P+ VT+  +++  CK G+   A +I  +++K G   +  TY 
Sbjct: 295 EAIGIFKKM---CRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYG 351

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TL+ GYA  G+  E   L D M+K+G+   + ++N  +        V+ AL V S+M  +
Sbjct: 352 TLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQ 411

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + PD   Y  +   LC  G V  A    N +  E +  +   +  LI+ LC  +     
Sbjct: 412 GLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKV 471

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           ++L   MI RG+  D I +  ++   CK G +  A  +++ M ++  +PN   YN++I+G
Sbjct: 472 EELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG 531

Query: 509 LCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
            C D  +D A  LL      G+  + +TYNT+INGY  NG+I +   +  EM   G+   
Sbjct: 532 YCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPG 591

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMI 595
            V Y +L+  L + G    A+EL   MI
Sbjct: 592 IVTYEMLLQGLFQAGRTVAAKELYLRMI 619



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 248/507 (48%), Gaps = 7/507 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL-YK 205
           A +  ++  C ++G  + A+  + ++   G  +S   ++  L  L           +  +
Sbjct: 100 ATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLR 159

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK-SGIWP-NVVCFNMIINEACQ 263
            M   G   ++ ++ +++  LC +   ++AL L + M    G  P +VV +  +IN   +
Sbjct: 160 RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLR 219

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
            G L+ A  LF  M +  G S  P+ VT++ II+   K   ++ A ++   M+K G+  +
Sbjct: 220 EGQLDKAYSLFDAM-LDRGPS--PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
              Y +L+ GY   G  +EA+ +  +M + G+ P+ V Y + + +L   G    A  +  
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 336

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
            ++ +   PD  TY  L  G    G + +   L + ++++ M    + +N+++    K N
Sbjct: 337 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 396

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
            +  A  + S+M  +GL PDI+ YGT++D  C  G ++ A+  + ++K     PN+V++ 
Sbjct: 397 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 456

Query: 504 SIINGLCKDASLDAAKSL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+GLC     D  + L  +   R   LD I +N ++      G++ EA  +F  M  +
Sbjct: 457 TLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRI 516

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           GI  N   YN LI+  C  G   +A +L+ VM+ +G+ P  VTY T++  +S+N   E+ 
Sbjct: 517 GIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDG 576

Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLL 649
           + L  +M   GV+P   TY  ++  L 
Sbjct: 577 LTLLREMDGKGVNPGIVTYEMLLQGLF 603



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 184/429 (42%), Gaps = 40/429 (9%)

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           +A  ++ R+LK G   ++   N  +++  +      A+ LF +M      S  PN  T+ 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPRAGATSAAPNIATYG 103

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I    +LGR++ A      +I  G+  +   ++ L+ G            LCD     
Sbjct: 104 IVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKG------------LCDRRRTS 151

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
             M                        VL  M +    PD F+Y+IL KGLC +   +QA
Sbjct: 152 DAMD----------------------IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQA 189

Query: 414 FKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             L + ++ +H      D  +Y  +IN L +   L  A  L  +M+ RG  PD++TY ++
Sbjct: 190 LDLLH-IMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSI 248

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I    K   ++ A QV+  M K    P+ ++Y S+++G C       A  + +   R G+
Sbjct: 249 ISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGV 308

Query: 531 -LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D +TY  L++    NGK  EA  +F  +   G   +   Y  L++     G   +  +
Sbjct: 309 EPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHD 368

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+ +M+  G+   +  +  ++  ++K+   +E + +  +M   G++PD   Y  ++  L 
Sbjct: 369 LLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILC 428

Query: 650 GEKSAEDQV 658
                +D +
Sbjct: 429 TAGRVDDAL 437



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 149/303 (49%), Gaps = 32/303 (10%)

Query: 143 KATPA--VFDALVRA-----CTQIG------ATEGA----YDVIQKLKVKGHSVSIHAWN 185
           K+T A  +FD+LV+       T  G      ATEGA    +D++  +  KG  +  H +N
Sbjct: 327 KSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 386

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             +    K N++     ++  M   G   ++  +  V+  LC   ++++ALS +  +   
Sbjct: 387 MIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSE 446

Query: 246 GIWPNVVCFNMIINEAC------QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
           G+ PN+V F  +I+  C      +V +L F          M    +  +++  N I+   
Sbjct: 447 GLAPNIVVFTTLIHGLCTCDKWDKVEELAFE---------MIDRGICLDTIFFNAIMGNL 497

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK GRV  A+ +   M++ GI+ N  TY TLIDGY   G  +EA++L   MV  G+ P++
Sbjct: 498 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 557

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V YN+ I+     G +E  L +L +M  K + P   TY +L +GL + G    A +L+ +
Sbjct: 558 VTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLR 617

Query: 420 VLE 422
           +++
Sbjct: 618 MIK 620



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/508 (20%), Positives = 202/508 (39%), Gaps = 75/508 (14%)

Query: 57  SLTNSLVNRVVSE-FRKSPKLALEFYTWVGENNRFSHSLESSCA-IVHLLVNWRRFDDAL 114
            L  + V RV++   R SP L       + +  R S +++     +  L      F   +
Sbjct: 116 DLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTI 175

Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKV 174
           LL G      S   L+ L  + D    C      +  ++    + G  + AY +   +  
Sbjct: 176 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLD 235

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           +G S  +  +++ +S L K   + +  +++  MV  G + +   +  +++  C   K +E
Sbjct: 236 RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKE 295

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A+ ++ +M + G+ P+VV +  +++  C+ G    A K+F  + V  G    P+S T+  
Sbjct: 296 AIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL-VKRGHK--PDSTTYGT 352

Query: 295 IINGFCKLG-----------------------------------RVEFAEEIRYAMIKAG 319
           +++G+   G                                   +V+ A  +   M + G
Sbjct: 353 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 412

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           ++ ++  Y T++D     G  ++AL   + +   GL PN VV+ + IH L      +   
Sbjct: 413 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVE 472

Query: 380 FVLSDMIDKHIC-----------------------------------PDHFTYSILTKGL 404
            +  +MID+ IC                                   P+  TY+ L  G 
Sbjct: 473 ELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGY 532

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
           C +G + +A KL   ++   +     +YN +IN   ++  +     LL  M  +G+ P I
Sbjct: 533 CLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGI 592

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           +TY  L+ G  + G    A ++Y  M K
Sbjct: 593 VTYEMLLQGLFQAGRTVAAKELYLRMIK 620


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 250/511 (48%), Gaps = 7/511 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++A+V    + G  E A  +   + V  ++   + +   +  L     I     +  EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNA---YTYFPVVRALCARGRIADALAVLDEMP 186

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G       +++++ A C+      A+ +   +   G   +V   N+++N  C  G ++
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL L R +     +   P+ V++N ++ G C   R    +E+   M++     N+ T+ 
Sbjct: 247 EALHLLRDLPSFGCE---PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 303

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI    R G  E    +  +MV+ G  P+  +Y + I  +  EG +E A  +L+ M   
Sbjct: 304 TLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY 363

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+   Y+ L KGLC     ++  +L  ++ ++    D  ++NIL+++ C++  +   
Sbjct: 364 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 423

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +LL  M+  G +PD+ITY T+I+G+CK G I+ AV + ++M     KPN + Y  ++ G
Sbjct: 424 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 483

Query: 509 LCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC  +  +DA   + Q  Q+   L+ IT+NTLIN     G + +A  +  +M   G + +
Sbjct: 484 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 543

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ +I+ L K G   +A EL+ VM+  G+ P+ + Y+++ +  S+     +VI++ D
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           ++  + +  D   YNA+IS L      E  +
Sbjct: 604 NIQDTTIRSDAVLYNAVISSLCKRGETERAI 634



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 231/493 (46%), Gaps = 4/493 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C   P ++  ++ A  + G    A  V++ L  +G ++ +   N  L+ +     +    
Sbjct: 190 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEAL 249

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L +++ S G   +V ++N V+  LC   +      L   M++    PN+V FN +I+  
Sbjct: 250 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G  E   ++   +  M      P+   +  II+G CK G +E A EI   M   G+ 
Sbjct: 310 CRNGLFE---RVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV  Y TL+ G       EE   L  EM  +    ++V +N  + +    G V+  + +
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M++    PD  TY+ +  G C+ G + +A  L   +       +  SY I++  LC 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +     A+ L+S MI +G   + IT+ TLI+  CK G +E A+++ + M      P+L+ 
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+++I+GL K    D A  LL      G+  + I Y+++ +     G+I +   MF  ++
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 606

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           +  I  + V YN +I+ LCK G  ++A E +  M+  G +P+  TYT L+   +     +
Sbjct: 607 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 666

Query: 621 EVIELHDDMVLSG 633
           E  E+  ++   G
Sbjct: 667 EAQEMLTELCSKG 679



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 125/301 (41%), Gaps = 40/301 (13%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E L  + D  + C      F+ LV    Q G  +   ++++++   G    +  +   ++
Sbjct: 390 ELLAEMFD--KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 447

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
              K   I     L K M +CG   N  ++ +V+  LC   +  +A  L  +M++ G   
Sbjct: 448 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 507

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N + FN +IN  C+ G +E A++L ++M V   +   P+ ++++ +I+G  K G+ + A 
Sbjct: 508 NPITFNTLINFLCKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGKTDEAL 564

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGG------------------------------- 338
           E+   M+  G+  N   Y+++    +R G                               
Sbjct: 565 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 624

Query: 339 ----SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                +E A+     MV  G +PN   Y   I  L +EG V+ A  +L+++  K     H
Sbjct: 625 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKH 684

Query: 395 F 395
            
Sbjct: 685 L 685


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 243/498 (48%), Gaps = 22/498 (4%)

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +G L  + + K  P    AL       GA  G  D  ++L+   HS+    +N+ L+   
Sbjct: 8   KGFLHRHLLEKGNPVT--ALSLNVCNFGAFSGGSDYRERLRSGLHSIK---FNDALT--- 59

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
                     L+ +M     + ++  F+ ++ A+ K  K E  +SL+  +   GI  ++ 
Sbjct: 60  ----------LFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLY 109

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            F+ +I+  C+   L  AL    KM  +  +   P+ VT   ++NGFC + R++ A  + 
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFE---PSIVTFGSLVNGFCHVNRIQEAMSLV 166

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             ++  G + NV  Y T+ID        + AL + + M K G+ P+ + YNS I  LF  
Sbjct: 167 DQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHS 226

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G    +  +LSDM+   I PD  T+S +     + G + +A K ++++++  +  +  +Y
Sbjct: 227 GKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTY 286

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N LIN LC    L  AK++L+ M+ +G  P+ +TY TL++GYCK   ++ A+++   M  
Sbjct: 287 NSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSH 346

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
                +   YN++  G C+    +AA+ +L      G+L D  T+N L++G   +GKI +
Sbjct: 347 DGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEK 406

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A     +++     V  + YNI+I  +CK    + A  L   + L G+ PD +TYTT++ 
Sbjct: 407 ALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMI 466

Query: 612 RFSKNCSPEEVIELHDDM 629
              +     E  EL+  M
Sbjct: 467 GLRRKRLWLEAHELYRKM 484



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 220/421 (52%), Gaps = 6/421 (1%)

Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           +  P++  F  L+ A  ++   E    + + +++ G S  +++++  +    + + +   
Sbjct: 68  RPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLA 127

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
                +M+  G+  ++ TF  ++   C   +++EA+SL  +++  G  PNVV +N II+ 
Sbjct: 128 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDS 187

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            C+   ++ AL +   M  M    + P+ +T+N +I      G+   +  I   M++ GI
Sbjct: 188 LCENRQVDTALDVLNHMEKMG---IRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGI 244

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             +V T++ +ID + + G   EA +  DEM++R + PN V YNS I+ L   G ++ A  
Sbjct: 245 HPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKK 304

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           VL+ M+ K   P+  TY+ L  G C++  V  A K+   +  + + GD ++YN L    C
Sbjct: 305 VLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           ++    AA+++L+ M+  G++PDI T+  L+DG C+ G IE A+   E+++K E    ++
Sbjct: 365 QAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGII 424

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN II G+CK   ++ A  L  +    G+  D ITY T++ G        EA  ++ +M
Sbjct: 425 TYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKM 484

Query: 560 R 560
           +
Sbjct: 485 K 485



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 211/420 (50%), Gaps = 12/420 (2%)

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           K  +AL+L+  M +S   P++V F+ ++    ++   E  + LFR + ++    +  +  
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILG---ISHDLY 109

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           + + +I+ FC+  R+  A      M+K G + ++ T+ +L++G+      +EA+ L D++
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           V  G  PN V+YN+ I  L     V+ AL VL+ M    I PD  TY+ L   L  +G  
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
             + ++ + ++   +  D  +++ +I+   K   L  AK+    MI R + P+I+TY +L
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+G C  G ++ A +V   M      PN V YN+++NG CK   +D A  +L      G+
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA-- 587
             D  TYNTL  GY   G+   A  + + M + G+  +   +N+L++ LC+ G  ++A  
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALV 409

Query: 588 --RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              +L K   + GII    TY  ++    K    E+   L   + L GVSPD  TY  ++
Sbjct: 410 KLEDLQKSETVVGII----TYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMM 465



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 3/222 (1%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           K Y EM+      N+ T+N +I  LC    L+EA  +   M+  G +PN V +N ++N  
Sbjct: 269 KQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGY 328

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+   ++ A+K+   + VMS D V  ++ T+N +  G+C+ G+   AE++   M+  G+ 
Sbjct: 329 CKSKRVDDAMKI---LCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVL 385

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ T+  L+DG    G  E+AL   +++ K   +   + YN  I  +     VE A ++
Sbjct: 386 PDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYL 445

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
              +  K + PD  TY+ +  GL R     +A +L+ ++ ++
Sbjct: 446 FCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKD 487



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 34/271 (12%)

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           AL +  DM +    P    +S L   + +    +    L   +    +  D YS++ LI+
Sbjct: 57  ALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLID 116

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             C+ + L+ A   L  M+  G  P I+T+G+L++G+C    I+ A+ + + +  +  +P
Sbjct: 117 CFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEP 176

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFS 557
           N+VIYN+II+ LC+                                  N ++  A  + +
Sbjct: 177 NVVIYNTIIDSLCE----------------------------------NRQVDTALDVLN 202

Query: 558 EMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC 617
            M  +GI  + + YN LI  L   G +  +  ++  M+  GI PD +T++ ++  F K  
Sbjct: 203 HMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEG 262

Query: 618 SPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
              E  + +D+M+   V P+  TYN++I+ L
Sbjct: 263 QLLEAKKQYDEMIQRSVDPNIVTYNSLINGL 293


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 205/394 (52%), Gaps = 3/394 (0%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           F  ++ E    G+ E AL+ +  M V  G      S   + +I+   +LG+VE A ++  
Sbjct: 165 FPYLLRELGNRGEWERALQGYEWM-VQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFN 223

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
              KAG   NV  Y+ ++  Y R G   EAL++   M K G  PN + YN+ I      G
Sbjct: 224 RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGG 283

Query: 374 -DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            D++ AL +  +M  + + PD  T++ L     R    + + ++  ++    +  D ++Y
Sbjct: 284 VDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTY 343

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
           N LI+ +CK   +  A  ++SSM ++ + P+++TY T+IDGY K G  E A+ +Y +MK+
Sbjct: 344 NTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKE 403

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
              +P+ V YN++I+   K    D A +  +  +R+GL  D +TYN LI+ Y   GK  +
Sbjct: 404 SGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKD 463

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A  +F +M+  G+  N + Y+ LI+   K G +Q A  +       G+ PD V Y++L+ 
Sbjct: 464 AAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLID 523

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              K    E+ + L  +M  +G+ P+  TYN++I
Sbjct: 524 SCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLI 557



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 226/469 (48%), Gaps = 25/469 (5%)

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           ++    ++G  E A DV  + +  G   +++A++  +S   +        K+++ M   G
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 264

Query: 212 YVENVNTFNLVIYALCKE-CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL-EF 269
              N+ T+N +I A  K    L++AL ++  M K G+ P+ + FN +I   C  G L E 
Sbjct: 265 CKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWED 323

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           + ++F +M       +  +  T+N +I+  CK G++E A  I  +M    I  NV TY+T
Sbjct: 324 SQRVFAEM---QRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYST 380

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           +IDGY + G  EEA+ L  +M + G+ P+ V YN+ I      G  + AL    DM    
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +  D  TY+ L     + G  K A  L +++  E +V +  +Y+ LI+   K+     A 
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
            +       GL PD++ Y +LID  CK G +E AV + + M +   +PN+V YNS+I+  
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAY 560

Query: 510 CKDASLD---AAKSLL------QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            ++  +D   AAK  +      +   R   +   T  +  N     G +A A ++F EM+
Sbjct: 561 GRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLA-AVSVFHEMQ 619

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVM---------ILHGII 600
             G+  N V ++ ++N   +    Q+A  L++ M         I HG++
Sbjct: 620 QFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYGIAHGLL 668



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 231/494 (46%), Gaps = 59/494 (11%)

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYV--ENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
            L  L    E  R  + Y+ MV  G++  E     +++I  L +  K+E AL ++ R  K
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFNRAQK 227

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           +G   NV  ++ +++   + G    ALK+F+    M      PN +T+N II+  C  G 
Sbjct: 228 AGFGNNVYAYSAMVSAYGRSGRCREALKVFQ---AMKKAGCKPNLITYNTIIDA-CGKGG 283

Query: 305 VEF--AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           V+   A +I   M K G++ +  T+ +LI   +RG   E++ R+  EM +RG+  +   Y
Sbjct: 284 VDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTY 343

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N+ I  +   G +E A  ++S M  K+I P+  TYS +  G  + GC ++A  L++ + E
Sbjct: 344 NTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKE 403

Query: 423 EHMVGDAYSYNILINYLCK----SNNLAAAKQ---------------------------- 450
             +  D  SYN LI+   K     + L A K                             
Sbjct: 404 SGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKD 463

Query: 451 ---LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
              L   M   GL+P+++TY  LID Y K G  + A  ++   K+   KP++V+Y+S+I+
Sbjct: 464 AAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLID 523

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR-NVGIA 565
             CK   ++ A  LLQ   + G+  + +TYN+LI+ Y  NG++    A    M  NV   
Sbjct: 524 SCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINV--- 580

Query: 566 VNKVGYNILINFLCKFGCYQQARE-----LMKVMILH-----GIIPDYVTYTTLVTRFSK 615
            NKVG +     +CK    QQ        L  V + H     G+ P+ VT++ ++   S+
Sbjct: 581 FNKVG-DRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSR 639

Query: 616 NCSPEEVIELHDDM 629
             S +E   L + M
Sbjct: 640 CSSLQEASVLLEQM 653



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 223/491 (45%), Gaps = 55/491 (11%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN-EIGRFWKLYKE 206
            + A+V A  + G    A  V Q +K  G   ++  +N  +    K   ++ +   +++E
Sbjct: 236 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEE 295

Query: 207 MVSCGYVENVNTFNLVIYALCKECKL-EEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           M   G   +  TFN +I A+C    L E++  ++  M + GI  ++  +N +I+  C+ G
Sbjct: 296 MQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGG 354

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            +E A  +   M  M   ++ PN VT++ +I+G+ KLG  E A  + + M ++G+  +  
Sbjct: 355 QMELAASI---MSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRV 411

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           +Y TLID YA+ G  ++AL  C +M + GL  + V YN+ I     +G  + A  +   M
Sbjct: 412 SYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKM 471

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             + + P+  TYS L     + G  + A  +  +     +  D   Y+ LI+  CK   +
Sbjct: 472 KAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLV 531

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE------------------------ 481
             A  LL  M   G+ P+I+TY +LID Y + G ++                        
Sbjct: 532 EDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEI 591

Query: 482 ------------------GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
                              AV V+  M++   KPN+V +++I+N   + +SL  A  LL+
Sbjct: 592 ICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLE 651

Query: 524 ASQRIGLLDAITYNTLINGYFINGK---IAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
              ++   D+  Y  + +G  +  +     EA  +F E+  +  A     YN L + L  
Sbjct: 652 ---QMRFFDSWVYG-IAHGLLMGLREHVWVEAQRLFDEIARMDYATGAAFYNALTDVLWH 707

Query: 581 FGCYQQARELM 591
           FG  Q A+E++
Sbjct: 708 FGQRQGAQEVV 718


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 217/432 (50%), Gaps = 6/432 (1%)

Query: 80  FYTWVGE--NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLL 136
           F+TW+    N+ F H+L S C ++H L   +   +A  L+  ++S     S       + 
Sbjct: 1   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAAIX 60

Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
           ++    +    VF  L+    + G    A +  +  +     V        L HL+KL  
Sbjct: 61  ETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKY 120

Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
               W     +   G       FN++++  CK+  +  A S++  + K G+ P+VV +N 
Sbjct: 121 FKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNT 180

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           ++N   ++GDL      FR    M    V P+  T++ +ING CK  +++ A E+   M+
Sbjct: 181 LMNGYIRLGDLNEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 237

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G+  N  T+ TLIDG+ + G  + A+ +  +M+ + L+P+ + YN+ I+ L  +GD++
Sbjct: 238 VKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 297

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            A  ++ +M  K +  D  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI
Sbjct: 298 QAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALI 357

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           + LC+      A+++L  M+  GL PD  TY  +I+ +CK G++    ++ ++M++    
Sbjct: 358 SGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHA 417

Query: 497 PNLVIYNSIING 508
           P++V YN ++NG
Sbjct: 418 PSVVTYNVLMNG 429



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 153/286 (53%), Gaps = 1/286 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R G + + F+L + +L
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
              +  D Y+Y++LIN LCK + +  A +L   M+V+GL P+ +T+ TLIDG+CK G ++
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L  A  L+      GL  D ITY TLI
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  AF     M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           PD  TYT ++  F K     +  +L  DM  +G +P   TYN +++
Sbjct: 383 PDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMN 428



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 159/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G   E  RL   M+ 
Sbjct: 144 NILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLA 203

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 204 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDL 263

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + ++ D  +YN LI  LCK  +L  A  L+  M ++GL  D ITY TLID
Sbjct: 264 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLID 323

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 324 GCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 383

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           D  TY  +IN +   G + +   +  +M+  G A + V YN+L+N
Sbjct: 384 DTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMN 428



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 122/226 (53%), Gaps = 1/226 (0%)

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           +NIL++  CK  ++  A+ +  ++   GL P +++Y TL++GY + G++    ++   M 
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
               +P++  Y+ +INGLCK++ +D A  L       GL  + +T+ TLI+G+  NG++ 
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A  ++ +M +  +  + + YN LI  LCK G  +QA +L+  M + G+  D +TYTTL+
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
               K    +   E    M+   +  D+  Y A+IS L  E  + D
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 368


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 254/512 (49%), Gaps = 24/512 (4%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           ++ LL   RR+DD   L+ ++    +                 K    +F+ L+    + 
Sbjct: 1   MLTLLGAARRYDDVQRLVESMQKDRT-----------------KLDTQLFNTLIHIYGEA 43

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
              E A   +     +G   + + +++ +   +K  ++     +YK+M+   +V +  TF
Sbjct: 44  NMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTF 103

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N++I +L K  ++EEA +++  M K  + P+V  + ++I     +G ++  +KLF  M  
Sbjct: 104 NILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESM-- 161

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            +     PN  T++ +++ F   GRV+ A +I   M++ G+  +  TY  LID + + G 
Sbjct: 162 -TAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQ 220

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            E A    D + K     N V YNS +  L  +GD++G + +   M  K +  +  TY+I
Sbjct: 221 LERAF---DFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAI 277

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L + L   G V+  ++L+ ++++  +  D  + N +++ L K+  + AA +L   M  +G
Sbjct: 278 LIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKG 337

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L  D +TY  LI+G  + G ++ A  +   M++    PN++ YN++I+   K ++L AA 
Sbjct: 338 LNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAAT 397

Query: 520 SL-LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            L L+  +R    + ++Y++LI G+   G+   A ++F EM+  G   N V YN+LI+ L
Sbjct: 398 RLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCL 457

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            + G +  A E ++ M   G     VT + LV
Sbjct: 458 IRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 7/436 (1%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +   FN +I+   +   +E+AL       K G  P    ++ +I    + GD++  L ++
Sbjct: 29  DTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMY 88

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           ++M        +P+  T N +I+   K  +VE A  +   M K  +  +V TY  LI   
Sbjct: 89  KQM---LKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSL 145

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
              G  +  ++L + M  +G  PN   Y+S +H   + G V+ A  +   M+ K + PD 
Sbjct: 146 GTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDA 205

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY+IL     + G +++AF     V +     +  +YN L++ L +  ++    +L   
Sbjct: 206 VTYNILIDAFGKTGQLERAFDF---VGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQ 262

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M  +GL+ + +TY  LI+     G +E   Q+Y  M   + K ++V  N++++ L K   
Sbjct: 263 MKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGR 322

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           ++AA  L Q  +  GL  D +TYN LING    GK+  A A+  EM   G A N + YN 
Sbjct: 323 VEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNT 382

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+   K+     A  L   M   G+ P+ V+Y++L+  F K    +  I L  +M   G
Sbjct: 383 LISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEG 442

Query: 634 VSPDNQTYNAIISPLL 649
             P++ TYN +I  L+
Sbjct: 443 CPPNHVTYNLLIDCLI 458



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 160/345 (46%), Gaps = 2/345 (0%)

Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
           R +  + +  +M K     + + + TLI  Y      E+AL+      K G  P    Y+
Sbjct: 10  RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69

Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
           S I      GDV+  L +   M+     PDH T++IL   L +   V++A  +   + + 
Sbjct: 70  SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129

Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
           ++  D Y+Y ILI  L     + A  +L  SM  +G  P++ TY +++  +   G ++ A
Sbjct: 130 NVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEA 189

Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGY 543
             +++ M +   +P+ V YN +I+   K   L+ A   +  S+     + +TYN+L++  
Sbjct: 190 CDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSR--SFTNEVTYNSLLSSL 247

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G I     +F +M+  G+  N++ Y ILI  L   G  +   +L   M+ + I  D 
Sbjct: 248 GRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDI 307

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           VT   ++   SK    E   EL  DM   G++ D  TYN +I+ L
Sbjct: 308 VTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGL 352



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 179/402 (44%), Gaps = 39/402 (9%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M  D    ++   N +I+ + +   +E A +   A  K G      TY+++I  + +GG 
Sbjct: 21  MQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGD 80

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +  L +  +M+K   +P++  +N  I  L     VE A  V  DM   ++ PD +TY+I
Sbjct: 81  VQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTI 140

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L + L   G +    KL   +  +    + ++Y+ +++    +  +  A  +   M+ +G
Sbjct: 141 LIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKG 200

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
           L PD +TY  LID + K G +E A   ++ + K     N V YNS+++ L +   +    
Sbjct: 201 LQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLM 257

Query: 520 SLLQASQRIGLL------------------------------------DAITYNTLINGY 543
            L    +  GL+                                    D +T N +++  
Sbjct: 258 ELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCL 317

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
              G++  AF +F +M+  G+  + V YNILIN L + G    A  L+  M  +G  P+ 
Sbjct: 318 SKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNI 377

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +TY TL++ + K  +      L  +M   GV+P+  +Y+++I
Sbjct: 378 ITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLI 419



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 3/255 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +++L+ +  + G  +G  ++  ++K KG   +   +   +  L     +   W+LY EM
Sbjct: 239 TYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEM 298

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
           V      ++ T N V+  L K  ++E A  L+  M   G+  + V +N++IN   + G L
Sbjct: 299 VDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKL 358

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A  L  +M     +   PN +T+N +I+ + K   +  A  +   M + G+  NV +Y
Sbjct: 359 DAAGALLLEM---EENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           ++LI+G+ + G ++ A+ L  EM   G  PN+V YN  I  L   G    A+  L +M D
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRD 475

Query: 388 KHICPDHFTYSILTK 402
                   T S+L +
Sbjct: 476 AGCQMGKVTKSLLVR 490


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 232/475 (48%), Gaps = 9/475 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN-TFNLVIYALCKECKLEE 234
           G   S  ++N  LS L + +       LY+ MV    V     TF +   ALC+  + +E
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           AL+L   M + G  P+ V +  +I+  C  G +  A  L  +M +M   +   +  T + 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA---DVNTFDD 250

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++ G C LGRV  A  +   M+  G    V TY  L+ G  R   ++EA      M+ R 
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRV 306

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
              N V++N+ I    AEG +  A  +   M  K   PD  TYSIL  GLC+ G +  A 
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L  ++ ++    +  +Y I+++  CK+      + LL  M  +GL  +   Y  +I   
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           CK G ++ A+ + + M+     P++  YN+II  LC +  ++ A+ + +     G++ + 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           ITYNT+I+    +G+  +A  +  EM   G +++ V YN LI  +CK G   ++  L++ 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           M   GI P+ V+Y  L++   K     + +EL   M+  G++PD  TYN +I+ L
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 236/465 (50%), Gaps = 12/465 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           L  L G+  +   C     ++  ++ A C Q G TE A  ++ ++ + G +  ++ +++ 
Sbjct: 195 LALLRGM--ARHGCVPDAVLYQTVIHALCDQGGVTEAA-TLLNEMLLMGCAADVNTFDDV 251

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +  +  L  +    +L   M++ G +  V T+  ++  LC+  + +EA ++  R+ +   
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-- 309

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
             NVV FN +I      G L  A +L+  MG+       P++ T++ +++G CKLGR+  
Sbjct: 310 --NVVLFNTVIGGCLAEGKLAEATELYETMGL---KGCQPDAHTYSILMHGLCKLGRIGS 364

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M K G   NV TY  ++  + + G  ++   L +EM  +GL  N+  YN  I+
Sbjct: 365 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 424

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L  +G ++ A+ ++ +M  +   PD  +Y+ +   LC N  +++A  +   +LEE +V 
Sbjct: 425 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 484

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +YN +I+ L +      A +L   MI+ G   D+++Y  LI   CK GN++ ++ + 
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 544

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           E M +   KPN V YN +I+ LCK+  +  A  L +     GL  D +TYNTLING    
Sbjct: 545 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 604

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           G +  A  +  ++ N  +  + + YNILI++ CK      A  L+
Sbjct: 605 GWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 214/457 (46%), Gaps = 8/457 (1%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +L        L + M   G V +   +  VI+ALC +  + EA +L   ML  G   +
Sbjct: 185 LCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 244

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  F+ ++   C +G +  A +L  +M        +P  +T+  ++ G C   RV  A+E
Sbjct: 245 VNTFDDVVRGMCGLGRVREAARLVDRMMT---KGCMPGVMTYGFLLQGLC---RVRQADE 298

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
            R AM+    + NV  + T+I G    G   EA  L + M  +G  P+   Y+  +H L 
Sbjct: 299 AR-AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A+ +L +M  K   P+  TY+I+    C+NG       L  ++  + +  ++ 
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            YN +I  LCK   +  A  L+  M  +G  PDI +Y T+I   C    +E A  ++EN+
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKI 549
            +     N + YN+II+ L +D     A  L +     G  LD ++YN LI     +G +
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             +  +  EM   GI  N V YNILI+ LCK    + A EL K M+  G+ PD VTY TL
Sbjct: 538 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 597

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +    K       + L + +    V PD  TYN +IS
Sbjct: 598 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 219/450 (48%), Gaps = 9/450 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMIINEACQVGDLEF 269
           G   +  ++N+V+  L +     +AL+LY RM+ +  + P    F +     C++G  + 
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL L R M   +    +P++V +  +I+  C  G V  A  +   M+  G   +V T+  
Sbjct: 194 ALALLRGM---ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           ++ G    G   EA RL D M+ +G MP  + Y   +  L      + A  +L  + + +
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +      ++ +  G    G + +A +L+  +  +    DA++Y+IL++ LCK   + +A 
Sbjct: 311 V----VLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +LL  M  +G  P+++TY  ++  +CK G  +    + E M       N   YN +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CKD  +D A  L+Q  +  G   D  +YNT+I     N ++ EA  MF  +   G+  N 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           + YN +I+ L + G +Q A  L K MILHG   D V+Y  L+    K+ + +  + L ++
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           M   G+ P+N +YN +IS L  E+   D +
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDAL 576



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 38/345 (11%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F+ ++  C   G    A ++ + + +KG     H ++  +  L KL  IG   +L +EM
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372

Query: 208 VSCGYVENVNTFNLV-----------------------------------IYALCKECKL 232
              G+  NV T+ +V                                   IYALCK+ ++
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +EA+ L   M   G  P++  +N II   C    +E A  +F  +     + V+ N +T+
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL---LEEGVVANGITY 489

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N II+   + GR + A  +   MI  G   +V +Y  LI    + G+ + +L L +EM +
Sbjct: 490 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 549

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +G+ PNNV YN  I  L  E  V  AL +   M+++ + PD  TY+ L  GLC+ G +  
Sbjct: 550 KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHA 609

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           A  L  ++  E++  D  +YNILI++ CK   L  A  LL+  + 
Sbjct: 610 ALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 654



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 86/177 (48%), Gaps = 17/177 (9%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           I+H L+   R+ DA+ L   ++          L G       C      ++ L++A  + 
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMI----------LHG-------CSLDVVSYNGLIKAMCKD 534

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + +  +++++  KG   +  ++N  +S L K   +    +L K+M++ G   ++ T+
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 594

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
           N +I  LCK   +  AL+L  ++    + P+++ +N++I+  C+V  L+ A  L  +
Sbjct: 595 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 273/584 (46%), Gaps = 65/584 (11%)

Query: 124 NSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGAT-------------------EG 164
           N+V   + L+GL D+  + +AT    D L+R   + G T                   E 
Sbjct: 127 NTVIFGQLLKGLCDAKRVDEAT----DILLRRMPEFGCTLNVISYNILLKGLCNEKRAEE 182

Query: 165 AYDVIQKLKVKG---HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNL 221
           A +++  +   G   H+ ++  +   +  L K   + R   +++ M+  G   N +T+  
Sbjct: 183 ALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTC 242

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS 281
           +I+      K +E + +   M   G+ P+ V + ++++  C+ G    A  +F  + +  
Sbjct: 243 LIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSL-IRK 301

Query: 282 GDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
           G  + P+   +  +++G+   G +         M++ G+  +   +  + + YA+    +
Sbjct: 302 G--IKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMID 359

Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
           EA+ + D+M ++ L P  V Y + I  L   G V+ A+   + MI++ + PD F +S L 
Sbjct: 360 EAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLV 419

Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
            GLC     ++A KL  +VL++ +  +A  +NIL+  LC+   +  A++L+  M+   + 
Sbjct: 420 YGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVR 479

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD+I+Y TL+DG+C  G I+ A ++ + M  +  KP+   YN++++G CK   +D A SL
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSL 539

Query: 522 LQASQRIGLLDAI-TYNTLINGYFINGK-------------------------------- 548
            +     GL   + TYNT+++G F  G+                                
Sbjct: 540 FREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCR 599

Query: 549 ---IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
              + EAF MF  + +  + ++    NI+I  L K G  + A +L   +  +G++PD  T
Sbjct: 600 NNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVET 659

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           Y  +     K  S EE+ EL   M  +G +P+++  NA++  LL
Sbjct: 660 YRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 207/439 (47%), Gaps = 2/439 (0%)

Query: 213 VENVNTFNLVIYALCKECKLEEALS-LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           + N   F  ++  LC   +++EA   L  RM + G   NV+ +N+++   C     E AL
Sbjct: 125 LNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEAL 184

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
           +L   M      S  PN VT+  +I+G CK   V+ A+ +   MI  G+  N  TY  LI
Sbjct: 185 ELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLI 244

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            GY   G  +E +++  EM   GL P+ V+Y   + +L   G    A  +   +I K I 
Sbjct: 245 HGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIK 304

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P    Y IL  G    G + +     + ++   +  D + +NI+ N   K   +  A  +
Sbjct: 305 PHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHI 364

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M  + L P ++ YG LID  CK G ++ AV  +  M      P++ +++S++ GLC 
Sbjct: 365 FDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCT 424

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
               + A+ L       G+ L+A  +N L+      G++ EA  +   M  V +  + + 
Sbjct: 425 VDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVIS 484

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           YN L++  C  G   +A +L+ VM+  G+ PD  TY TL+  + K    ++   L  +M+
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREML 544

Query: 631 LSGVSPDNQTYNAIISPLL 649
           + G++P   TYN I+  L 
Sbjct: 545 MKGLTPGVVTYNTILHGLF 563



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 209/426 (49%), Gaps = 20/426 (4%)

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHS 178
           +LM  N VSP        D +        +F+ +  A  +    + A  +  K++ +  S
Sbjct: 331 DLMVRNGVSP--------DHH--------IFNIMFNAYAKKAMIDEAMHIFDKMRQQWLS 374

Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
             +  +   +  L KL  +      + +M++ G   ++  F+ ++Y LC   K E+A  L
Sbjct: 375 PGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKL 434

Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
           ++ +L  GI  N   FN+++   C+ G +  A +L   + +M    V P+ +++N +++G
Sbjct: 435 FFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRL---IDLMLRVDVRPDVISYNTLVDG 491

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            C  GR++ A ++   M+  G+  +  TY TL+ GY +    ++A  L  EM+ +GL P 
Sbjct: 492 HCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPG 551

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V YN+ +H LF  G    A  +  +MI+     D +TY+I+  GLCRN  V +AFK+  
Sbjct: 552 VVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQ 611

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            +  + +  D ++ NI+I  L K      A  L +++   GL+PD+ TY  + +   K G
Sbjct: 612 SLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEG 671

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYN 537
           ++E   +++  M++    PN  + N+++  L     +  A   L +  ++   L+A T +
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTS 731

Query: 538 TLINGY 543
            LI+ Y
Sbjct: 732 MLISIY 737



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 214/506 (42%), Gaps = 83/506 (16%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFN---MIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
           L++AL L+  ML      +V  FN    +++ A      E  + LF +M       V P+
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 289 SVTHNCIINGFCKLGRV-------------------------------------EFAEEI 311
           S T+  +I  FC++GR+                                     E  + +
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG---LMPNNVVYNSTIHW 368
              M + G   NV +Y  L+ G      +EEAL L   M   G     PN V Y + I  
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L     V+ A  V   MIDK + P++ TY+ L  G    G  K+  ++  ++    +  D
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN--------- 479
              Y +L++YLCK+     A+ +  S+I +G+ P +  YG L+ GY   G          
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 480 --------------------------IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
                                     I+ A+ +++ M++    P +V Y ++I+ LCK  
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391

Query: 514 SLDAAKSLLQASQRIG---LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
            +D A  +L+ +Q I      D   +++L+ G     K  +A  +F E+ + GI +N   
Sbjct: 392 RVDDA--VLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAF 449

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           +NIL+  LC+ G   +A+ L+ +M+   + PD ++Y TLV         +E  +L D MV
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV 509

Query: 631 LSGVSPDNQTYNAIISPLLGEKSAED 656
             G+ PD  TYN ++      +  +D
Sbjct: 510 SIGLKPDEFTYNTLLHGYCKARRIDD 535



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 187/390 (47%), Gaps = 7/390 (1%)

Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
           L+E+  F  L   MV  G   + + FN++  A  K+  ++EA+ ++ +M +  + P VV 
Sbjct: 323 LSEMHSFLDL---MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           +  +I+  C++G ++ A+  F +M     + V P+    + ++ G C + + E AE++ +
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQM---INEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFF 436

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            ++  GI  N   +  L+    R G   EA RL D M++  + P+ + YN+ +      G
Sbjct: 437 EVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTG 496

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
            ++ A  +L  M+   + PD FTY+ L  G C+   +  A+ L  ++L + +     +YN
Sbjct: 497 RIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYN 556

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +++ L +      AK+L  +MI      DI TY  +++G C+   ++ A ++++++   
Sbjct: 557 TILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
           + + ++   N +I  L K    + A  L       GL+ D  TY  +       G + E 
Sbjct: 617 DLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEEL 676

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
             +FS M   G A N    N L+ +L   G
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLHRG 706



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 159/378 (42%), Gaps = 49/378 (12%)

Query: 330 LIDGYARGGSS--EEALRLCDEMVKRGLMPNNVVYN---STIHWLFAEGDVEGALFVLSD 384
           +I G AR GS   ++AL+L DEM+      +   +N   + +         E  + + + 
Sbjct: 20  VIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNR 79

Query: 385 MIDK---HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM-VGDAYSYNILINYLC 440
           MI +    + P   TY+IL    CR G +K  F     +L+    + +   +  L+  LC
Sbjct: 80  MIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLC 139

Query: 441 KSNNLAAAKQ-LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV---EKK 496
            +  +  A   LL  M   G   ++I+Y  L+ G C     E A+++   M         
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHT 199

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAM 555
           PN+V Y ++I+GLCK   +D AK + Q     G+  +  TY  LI+GY   GK  E   M
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL------------------------- 590
             EM   G+  + V Y +L+++LCK G   +AR +                         
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 591 ----------MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
                     + +M+ +G+ PD+  +  +   ++K    +E + + D M    +SP    
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 641 YNAIISPLLGEKSAEDQV 658
           Y A+I  L      +D V
Sbjct: 380 YGALIDALCKLGRVDDAV 397



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/370 (22%), Positives = 165/370 (44%), Gaps = 40/370 (10%)

Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           +P V  + AL+ A  ++G  + A     ++  +G +  I  +++ +  L  +++  +  K
Sbjct: 374 SPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEK 433

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L+ E++  G   N   FN+++  LC+E ++ EA  L   ML+  + P+V+ +N +++  C
Sbjct: 434 LFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHC 493

Query: 263 QVGDLEFALKL-----------------------------------FRKMGVMSGDSVLP 287
             G ++ A KL                                   FR+M +M G  + P
Sbjct: 494 LTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREM-LMKG--LTP 550

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
             VT+N I++G  ++GR   A+E+   MI     C++ TY  +++G  R    +EA ++ 
Sbjct: 551 GVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMF 610

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             +  + L  +    N  I  L   G  E A+ + + +    + PD  TY ++ + L + 
Sbjct: 611 QSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKE 670

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +++  +L + + E     ++   N L+ +L    ++  A   LS +  +    +  T 
Sbjct: 671 GSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTT 730

Query: 468 GTLIDGYCKG 477
             LI  Y + 
Sbjct: 731 SMLISIYSRA 740


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 219/438 (50%), Gaps = 11/438 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++A+V      G  + A  ++  + ++  +   + +N  +  L          
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDT---YTYNTLIRGLCGRGRTDNAL 172

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +  +M+  G V +V T+ +++ A CK    ++A+ L   M   G  P++V +N+++N  
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G ++ A++  + +     +   PN+V++N ++ G C   R E AE++   M + G  
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCE---PNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRP 289

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV T+  LI    R G  E A+ + D++ K G  PN++ YN  +H    +  ++ A+  
Sbjct: 290 PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 349

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M+     PD  +Y+ L   LCR G V  A +L +Q+ ++       SYN +I+ L K
Sbjct: 350 VELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 409

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +     A +LL+ M+ +GL PDIITY T+  G C+ G IE A++ +  ++ +  +PN V+
Sbjct: 410 AGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVL 469

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN+I+ GLCK  +  +A  L       G + +  TY  LI G    G + EA  M +E+ 
Sbjct: 470 YNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELC 529

Query: 561 NVGIA----VNKVGYNIL 574
           + G+     VNK    +L
Sbjct: 530 SRGVVSKTLVNKGAIRLL 547



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 226/488 (46%), Gaps = 48/488 (9%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
           A N+ L  LV+  ++    +L + M              +I  LC   +  EA     R 
Sbjct: 58  ASNDRLRVLVRRGDLEEAIRLVESMAGL-EPSAAGPCAALIKKLCASGRTAEA-----RR 111

Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
           + +   P+V+ +N ++   C  G L+ A +L   M       + P++ T+N +I G C  
Sbjct: 112 VLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM------PMEPDTYTYNTLIRGLCGR 165

Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
           GR + A  +   M++ G   +V TY  L++   +    ++A++L DEM  +G  P+ V Y
Sbjct: 166 GRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTY 225

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC----------------- 405
           N  ++ +  EG V+ A+  L  +      P+  +Y+I+ KGLC                 
Sbjct: 226 NVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSR 285

Query: 406 ------------------RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
                             R G V+ A ++ +Q+ +     ++ SYN +++  CK   +  
Sbjct: 286 KGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 345

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A   +  M+  G  PDI++Y TL+   C+GG ++ AV++   +K     P L+ YN++I+
Sbjct: 346 AMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 405

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GL K    + A  LL      GL  D ITY+T+ +G    G+I EA   F +++++GI  
Sbjct: 406 GLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP 465

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V YN ++  LCK      A +L   M+ +G +P+  TYT L+   +     +E  E+ 
Sbjct: 466 NTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMM 525

Query: 627 DDMVLSGV 634
            ++   GV
Sbjct: 526 AELCSRGV 533



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 213/423 (50%), Gaps = 17/423 (4%)

Query: 226 LCKECKLEEALSLYYRMLKSGIWPNVV--CFNMIINEACQVGDLEFALKLFRKMGVMSGD 283
           L +   LEEA+ L   M  +G+ P+    C   +I + C  G    A ++          
Sbjct: 66  LVRRGDLEEAIRLVESM--AGLEPSAAGPCA-ALIKKLCASGRTAEARRVLA-------- 114

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
           S  P+ +++N ++ G+C  G+++ A  +  AM    ++ +  TY TLI G    G ++ A
Sbjct: 115 SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNA 171

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
           L + D+M++RG +P+ V Y   +         + A+ +L +M DK   PD  TY+++  G
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNG 231

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
           +C+ G V  A +    +       +  SYNI++  LC +     A++L++ M  +G  P+
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPN 291

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           ++T+  LI   C+ G +E A+++ + + K    PN + YN I++  CK   +D A + ++
Sbjct: 292 VVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351

Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                G   D ++YNTL+      G++  A  +  ++++ G     + YN +I+ L K G
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
             ++A EL+  M+  G+ PD +TY+T+ +   +    EE I+    +   G+ P+   YN
Sbjct: 412 KTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYN 471

Query: 643 AII 645
           AI+
Sbjct: 472 AIL 474



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 196/385 (50%), Gaps = 6/385 (1%)

Query: 218 TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
           T+N +I  LC   + + AL++   ML+ G  P+VV + +++   C+    + A+KL  +M
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213

Query: 278 GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARG 337
                    P+ VT+N ++NG C+ GRV+ A E   ++   G + N  +Y  ++ G    
Sbjct: 214 ---RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA 270

Query: 338 GSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDHFT 396
              E+A +L  EM ++G  PN V +N  I +L   G VE A+ +L D I K+ C P+  +
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEIL-DQIPKYGCTPNSLS 329

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ +    C+   + +A      ++      D  SYN L+  LC+   + AA +LL  + 
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
            +G  P +I+Y T+IDG  K G  E A+++   M     +P+++ Y++I +GLC++  ++
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A       Q +G+  + + YN ++ G         A  +F+ M + G   N+  Y ILI
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 576 NFLCKFGCYQQARELMKVMILHGII 600
             L   G  ++ARE+M  +   G++
Sbjct: 510 EGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 140/303 (46%), Gaps = 17/303 (5%)

Query: 357 PNNVVY-----NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF-TYSILTKGLCRNGCV 410
           PN V +     N  +  L   GD+E A+ ++  M      P      + L K LC +G  
Sbjct: 49  PNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLE--PSAAGPCAALIKKLCASGRT 106

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            +A ++           D  SYN ++   C +  L  A++L+++M +    PD  TY TL
Sbjct: 107 AEARRVLASCEP-----DVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTL 158

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I G C  G  + A+ V ++M +    P++V Y  ++   CK +    A  LL   +  G 
Sbjct: 159 IRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGC 218

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
             D +TYN ++NG    G++ +A      + + G   N V YNI++  LC    ++ A +
Sbjct: 219 APDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEK 278

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           LM  M   G  P+ VT+  L++   +    E  +E+ D +   G +P++ +YN I+    
Sbjct: 279 LMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFC 338

Query: 650 GEK 652
            +K
Sbjct: 339 KQK 341



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 10/225 (4%)

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDII-TYGTLIDGYCKGGNIEGAVQVYENMK 491
           N  +  L +  +L  A +L+ SM   GL P        LI   C  G    A +V  + +
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLASCE 117

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAE 551
                P+++ YN+++ G C    LD A+ L+ A       D  TYNTLI G    G+   
Sbjct: 118 -----PDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEP--DTYTYNTLIRGLCGRGRTDN 170

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A A+  +M   G   + V Y IL+   CK   Y+QA +L+  M   G  PD VTY  +V 
Sbjct: 171 ALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVN 230

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
              +    ++ +E    +   G  P+  +YN ++  L   +  ED
Sbjct: 231 GICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWED 275


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 253/523 (48%), Gaps = 25/523 (4%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN---EIGR 199
           + TPA    L R     GA       +  + + G   SI    NF+S  + LN    + R
Sbjct: 102 QTTPA----LSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKR 157

Query: 200 FWK---LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
            ++   ++  ++  GY  N  TF  ++  LC E K+ EA+ ++  M      P+ +   +
Sbjct: 158 VFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGV 217

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVL-----PNSVTHNCIINGFCKLGRVEFAEEI 311
           +I+  C+ G+   ALKL   M  ++G+S       P  V+++CII+  CK G VE A+E 
Sbjct: 218 LISGLCRTGNTCNALKLHEAM--INGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEF 275

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              M + GI  NV TY +L+ G       EEA RL  EMV  GL+P+ V ++  I  L  
Sbjct: 276 FVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCK 335

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
            G V+ A  +   M+ +++ P   TY+IL +G C  G V +  K+   ++ +    DA S
Sbjct: 336 VGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGS 395

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y+IL+   CK + +  A  L   M+ RG+ P +ITY  + D     G I+    V +++ 
Sbjct: 396 YSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSI- 454

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIA 550
                 +  IYN  ++GLCK+  +  A  +    +       +  +N+LING   + K+ 
Sbjct: 455 ------SYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLE 508

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
            A+ +F+ + N  +  + V Y I+I  LCK G  Q+A +L   M   G  P+ VT+ TL+
Sbjct: 509 IAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLM 568

Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
                N    +++EL   M    +SPD  T   ++  LL +++
Sbjct: 569 RGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDEN 611



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 188/415 (45%), Gaps = 49/415 (11%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLD---SYEI-CKATPAVFDALVRACTQIGATEGAYDV 168
            +L+ G   + N+ + L+  E +++    + I CK T   +  ++ +  + G  E A + 
Sbjct: 216 GVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEF 275

Query: 169 IQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCK 228
             ++K KG   ++  + + L  L   +E     +L+ EMV  G + +V TF+++I ALCK
Sbjct: 276 FVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCK 335

Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
             K++EA  L+  M++  + P+   +N++I   C  G ++   K+F  M           
Sbjct: 336 VGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSM----------- 384

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
                  +N  C+                     +  +Y+ L+  Y +      A+ L  
Sbjct: 385 -------VNKRCQH--------------------DAGSYSILMKAYCKDSEVHGAMILYR 417

Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           EM+ RG+ P  + Y+         G+++       DM+   I   +  Y++   GLC+NG
Sbjct: 418 EMMDRGIQPTVITYSKVGDARKLFGEIQ-----FQDMVLDSI--SYSIYNVYLDGLCKNG 470

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
           CV +A  +   +       +   +N LIN +C+S  L  A +L + +    L PD++TY 
Sbjct: 471 CVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYT 530

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
            +I G CK G  + A  ++  M++    PN+V +N+++ GLC ++       LL 
Sbjct: 531 IMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLH 585



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 108/256 (42%), Gaps = 15/256 (5%)

Query: 405 CRNG--CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           C++G   + +A    NQ++          +N L   L K         +   M   GL+ 
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLK 140

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + I+   L++  C    +     V+  + +   +PN   + +++ GLC +  +  A  + 
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200

Query: 523 QASQRIGLLD----AITYNTLINGYFINGKIAEAFAMFSEMRN------VGIAVNKVGYN 572
           +    +G+ D    AIT   LI+G    G    A  +   M N      +      V Y+
Sbjct: 201 KI---MGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYS 257

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            +I+ LCK G  ++A+E    M   GI P+ VTYT+L+         EE   L  +MV  
Sbjct: 258 CIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDH 317

Query: 633 GVSPDNQTYNAIISPL 648
           G+ PD  T++ +I  L
Sbjct: 318 GLLPDVVTFSVLIGAL 333



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 24/264 (9%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYL---CKSNN--LAAAKQLLSSMIVRGLIPDII 465
           +Q     ++ L  +   +  S N L  +L   CKS +  L  A    + MI     P + 
Sbjct: 49  EQFINFKSKTLPINSTPNTQSDNPLEQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALS 108

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            +  L     K       + +   M  +    N +  N ++N LC      + K + +  
Sbjct: 109 RFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLC------SVKRVFEGF 162

Query: 526 QRIGLL-------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
              G++       +  T+  L+ G  + GKI EA  +F  M       + +   +LI+ L
Sbjct: 163 VVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGL 222

Query: 579 CKFGCYQQARELMKVMI----LHGI--IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
           C+ G    A +L + MI      GI   P  V+Y+ ++    K+   E   E   +M   
Sbjct: 223 CRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEK 282

Query: 633 GVSPDNQTYNAIISPLLGEKSAED 656
           G+ P+  TY +++  L      E+
Sbjct: 283 GIFPNVVTYTSLLHGLCSASEWEE 306


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 214/415 (51%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L   C ++H L   +   +A  L+  ++S     S       + ++    ++ 
Sbjct: 6   NSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  Y+
Sbjct: 66  JYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLIDG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  L + LC+    
Sbjct: 303 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRS 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 VDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 417



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 153/290 (52%), Gaps = 1/290 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 304

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I +++V Y  L + LC+ G    
Sbjct: 305 KGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVD 364

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P
Sbjct: 365 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 414



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 151/272 (55%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E  RL   M+ 
Sbjct: 140 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M V+GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++ +GLC++     A+ +L+    +GL  
Sbjct: 320 GCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           DA TY  +IN +   G + +   +  EM+  G
Sbjct: 380 DARTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 160/303 (52%), Gaps = 11/303 (3%)

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
           F EEI    ++ G   ++  +  L+  + + G    A  + D + K GL P+ V YN+ +
Sbjct: 123 FYEEI----LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 178

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +     GD++    + S M+   + PD +TYS+L  GLC+   +  A +L +++L + +V
Sbjct: 179 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 238

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  ++  LI+  CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  +
Sbjct: 239 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 298

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLING 542
            + M     KP+ + Y ++I+G CK+  LD+A    K ++Q + R   LD + Y  L +G
Sbjct: 299 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIR---LDEVAYTALXSG 355

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G+  +A  M  EM +VG+  +   Y ++IN  CK G   +  +L+K M   G +P 
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 415

Query: 603 YVT 605
            VT
Sbjct: 416 VVT 418



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 118 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 238 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D   Y A+ S L 
Sbjct: 298 LIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLC 357

Query: 650 GEKSAED 656
            E  + D
Sbjct: 358 QEGRSVD 364



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 3/254 (1%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL    C++G ++ A  + + + +  +     SYN L+N   +  +L    +L S+
Sbjct: 137 YFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+  G+ PD+ TY  LI+G CK   ++ A ++++ M      PN V + ++I+G CK+  
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 515 LDAAKSLLQA--SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
           +D A  + +   SQ +   D ITYNTLI G    G + +A  +  EM   G+  +K+ Y 
Sbjct: 257 VDLAMEIYKQMLSQSLSP-DLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYT 315

Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
            LI+  CK G    A E  K MI   I  D V YT L +   +     +  ++  +M+  
Sbjct: 316 TLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSV 375

Query: 633 GVSPDNQTYNAIIS 646
           G+ PD +TY  II+
Sbjct: 376 GLKPDARTYTMIIN 389


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 233/458 (50%), Gaps = 14/458 (3%)

Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE---NVNTFNLVIYALCKECKLEEALSLY 239
           ++N+ L+ +++     R  + Y  ++    V    NV TFNLVI A+CK   +++A+ ++
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
             M      P+V  +  +++  C+   ++ A+ L  +M +   D   P+ VT N +ING 
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI---DGCFPSPVTFNVLINGL 279

Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
           CK G +  A ++   M   G   N  TY TLI G    G  E+A+ L D MV    +PN 
Sbjct: 280 CKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNV 339

Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
           V Y + I+ L  +G       VL+ M ++  C + + YS L  GL + G  ++A  L  +
Sbjct: 340 VTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKE 399

Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
           +  +    +   Y+ +I+ LC+      A ++LS M  +G  P+  T  +L+ G+ + GN
Sbjct: 400 MTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGN 459

Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL---LDAITY 536
              AV+V+++M K     N V Y+ +I+GLCKD  +  A  ++  +Q +G     D + Y
Sbjct: 460 SHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA--MMVWTQMLGKGCKPDVVAY 517

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGI--AVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +++ING  I G + +A  +++EM   G     + V YNIL+N LCK     +A +L+  M
Sbjct: 518 SSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSM 577

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCS-PEEVIELHDDMVL 631
           +  G  PD VT T  +    +    P++  E  D++V+
Sbjct: 578 LDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVV 615



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 192/379 (50%), Gaps = 5/379 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            F+ +++A  ++G  + A  V + + ++     ++ +   +  L K + I     L  EM
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   +  TFN++I  LCK+  L  A  L   M   G  PN V +N +I+  C  G L
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E A+ L  +   M     +PN VT+  IING  K GR      +   M + G   N   Y
Sbjct: 321 EKAISLLDR---MVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVY 377

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           +TLI G  + G S+EA+ L  EM  +G   N +VY++ I  L  +G  + A+ VLS+M +
Sbjct: 378 STLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTN 437

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+ +T S L KG    G   +A ++   + + +   +   Y++LI+ LCK   +  
Sbjct: 438 KGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKE 497

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM--KKVEKKPNLVIYNSI 505
           A  + + M+ +G  PD++ Y ++I+G    G +E A+Q+Y  M  +  + +P++V YN +
Sbjct: 498 AMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNIL 557

Query: 506 INGLCKDASLDAAKSLLQA 524
           +N LCK +S+  A  LL +
Sbjct: 558 LNTLCKQSSISRAIDLLNS 576



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 206/403 (51%), Gaps = 3/403 (0%)

Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
           FN ++N   Q G    AL+ +  +    G S+ PN +T N +I   CK+G V+ A ++  
Sbjct: 164 FNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFR 223

Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
            M     + +V TY TL+DG  +    +EA+ L DEM   G  P+ V +N  I+ L  +G
Sbjct: 224 DMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG 283

Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
           D+  A  ++ +M  K   P+  TY+ L  GLC  G +++A  L ++++    V +  +Y 
Sbjct: 284 DLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYG 343

Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
            +IN L K         +L+ M  RG   +   Y TLI G  K G  + A+ +++ M   
Sbjct: 344 TIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVK 403

Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEA 552
             + N ++Y+++I+GLC+D   D A  +L      G   +A T ++L+ G+F  G    A
Sbjct: 404 GYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRA 463

Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
             ++ +M       N+V Y++LI+ LCK G  ++A  +   M+  G  PD V Y++++  
Sbjct: 464 VEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMING 523

Query: 613 FSKNCSPEEVIELHDDMVLSGV--SPDNQTYNAIISPLLGEKS 653
            S     E+ ++L+++M+  G    PD  TYN +++ L  + S
Sbjct: 524 LSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSS 566



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 232/520 (44%), Gaps = 86/520 (16%)

Query: 60  NSLVNRVVSE--FRKSPKLALEFYTWV--GENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
           NS++N ++ E  F +    ALEFY  V   +    S ++ +   ++  +      DDA+ 
Sbjct: 165 NSVLNVIIQEGLFHR----ALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQ 220

Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
           +  + M+     P        D Y  C     + D L +A       + A  ++ ++++ 
Sbjct: 221 VFRD-MTIRKCEP--------DVYTYC----TLMDGLCKA----DRIDEAVSLLDEMQID 263

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
           G   S   +N  ++ L K  ++ R  KL   M   G + N  T+N +I+ LC + KLE+A
Sbjct: 264 GCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKA 323

Query: 236 LSLYYRMLKSGIWPNVVCFNMIIN----------EAC----------------------- 262
           +SL  RM+ S   PNVV +  IIN           AC                       
Sbjct: 324 ISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISG 383

Query: 263 --QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             + G  + A+ LF++M V   +    N++ ++ +I+G C+ G+ + A E+   M   G 
Sbjct: 384 LFKEGKSQEAMHLFKEMTVKGYEL---NTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGC 440

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  T ++L+ G+   G+S  A+ +  +M K     N V Y+  IH L  +G V+ A+ 
Sbjct: 441 TPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 500

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINY 438
           V + M+ K   PD   YS +  GL   G V+ A +L+N++L +      D  +YNIL+N 
Sbjct: 501 VWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNT 560

Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI-----------DG----------YCKG 477
           LCK ++++ A  LL+SM+ RG  PD++T    +           DG            K 
Sbjct: 561 LCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVRLLKR 620

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
             + GA ++ E M +    P    +  ++  LCK   + A
Sbjct: 621 QRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQA 660



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 4/257 (1%)

Query: 406 RNGCVKQAFKLHNQVLEEHMVG---DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           + G   +A + +N V+    V    +  ++N++I  +CK   +  A Q+   M +R   P
Sbjct: 173 QEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEP 232

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           D+ TY TL+DG CK   I+ AV + + M+     P+ V +N +INGLCK   L  A  L+
Sbjct: 233 DVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLV 292

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                 G + + +TYNTLI+G  + GK+ +A ++   M +     N V Y  +IN L K 
Sbjct: 293 DNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ 352

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G       ++ +M   G   +   Y+TL++   K    +E + L  +M + G   +   Y
Sbjct: 353 GRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVY 412

Query: 642 NAIISPLLGEKSAEDQV 658
           +A+I  L  +   +D V
Sbjct: 413 SAVIDGLCRDGKPDDAV 429



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 4/195 (2%)

Query: 466 TYGTLIDGYCKGGNIEGAVQVYENM---KKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           ++ ++++   + G    A++ Y ++   K V   PN++ +N +I  +CK   +D A  + 
Sbjct: 163 SFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVF 222

Query: 523 Q-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  + R    D  TY TL++G     +I EA ++  EM+  G   + V +N+LIN LCK 
Sbjct: 223 RDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKK 282

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G   +A +L+  M L G IP+ VTY TL+         E+ I L D MV S   P+  TY
Sbjct: 283 GDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 342

Query: 642 NAIISPLLGEKSAED 656
             II+ L+ +  A D
Sbjct: 343 GTIINGLVKQGRALD 357


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 222/444 (50%), Gaps = 5/444 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           L + MV  GY  +V     +I        + +A+ +   + K G  P+V  +N +IN  C
Sbjct: 107 LLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFC 165

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           ++  ++ A ++  +M         P++VT+N +I   C  G+++ A ++   ++      
Sbjct: 166 KMNRIDDATRVLDRM---RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQP 222

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
            V TY  LI+     G  +EAL+L DEM+ RGL P+   YN+ I  +  EG V+ A  ++
Sbjct: 223 TVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMI 282

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            ++  K   PD  +Y+IL + L   G  ++  KL  ++  E    +  +Y+ILI  LC+ 
Sbjct: 283 RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRD 342

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A  LL  M  +GL PD  +Y  LI  +C+ G ++ A++  E M      P++V Y
Sbjct: 343 GKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY 402

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N+++  LCK+   D A  +      +G   ++ +YNT+ +  + +G    A  M  EM +
Sbjct: 403 NTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVS 462

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            GI  +++ YN +I+ LC+ G   +A EL+  M      P  VTY  ++  F K    E+
Sbjct: 463 NGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 522

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
            I++ D MV +G  P+  TY  +I
Sbjct: 523 AIDVLDSMVGNGCRPNETTYTVLI 546



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 208/441 (47%), Gaps = 11/441 (2%)

Query: 222 VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK---LFRKMG 278
           + +  C+     E+L L   M++ G  P+V+    +I     + ++  A++   +  K G
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                   P+   +N +INGFCK+ R++ A  +   M       +  TY  +I      G
Sbjct: 151 Q-------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 203

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             + AL++ D+++     P  + Y   I     EG V+ AL +L +M+ + + PD FTY+
Sbjct: 204 KLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYN 263

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            + +G+C+ G V +AF++   +  +    D  SYNIL+  L         ++L++ M   
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 323

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
              P+++TY  LI   C+ G IE A+ + + MK+    P+   Y+ +I   C++  LD A
Sbjct: 324 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 383

Query: 519 KSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
              L+     G L D + YNT++     NGK  +A  +F ++  VG + N   YN + + 
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 443

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           L   G   +A  ++  M+ +GI PD +TY ++++   +    ++  EL  DM      P 
Sbjct: 444 LWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPS 503

Query: 638 NQTYNAIISPLLGEKSAEDQV 658
             TYN ++         ED +
Sbjct: 504 VVTYNIVLLGFCKAHRIEDAI 524



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 189/415 (45%), Gaps = 39/415 (9%)

Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           + A+N  ++   K+N I    ++   M S  +  +  T+N++I +LC   KL+ AL +  
Sbjct: 154 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
           ++L     P V+ + ++I      G ++ ALKL  +   M    + P+  T+N II G C
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDE---MLSRGLKPDMFTYNTIIRGMC 270

Query: 301 KLGRVEFA-----------------------------------EEIRYAMIKAGIDCNVR 325
           K G V+ A                                   E++   M     D NV 
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY+ LI    R G  EEA+ L   M ++GL P+   Y+  I     EG ++ A+  L  M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I     PD   Y+ +   LC+NG   QA ++  ++ E     ++ SYN + + L  S + 
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
             A  ++  M+  G+ PD ITY ++I   C+ G ++ A ++  +M+  E  P++V YN +
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIV 510

Query: 506 INGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
           + G CK   ++ A  +L +    G   +  TY  LI G    G  AEA  + +++
Sbjct: 511 LLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 192/380 (50%), Gaps = 6/380 (1%)

Query: 115 LLMGNLMSANSVS-PLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
           +++G+L S   +   L+ L+ LL   + C+ T   +  L+ A    G  + A  ++ ++ 
Sbjct: 194 IMIGSLCSRGKLDLALKVLDQLLS--DNCQPTVITYTILIEATMLEGGVDEALKLLDEML 251

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            +G    +  +N  +  + K   + R +++ + +   G   +V ++N+++ AL  + K E
Sbjct: 252 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWE 311

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHN 293
           E   L  +M      PNVV ++++I   C+ G +E A+ L +   +M    + P++ +++
Sbjct: 312 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK---LMKEKGLTPDAYSYD 368

Query: 294 CIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR 353
            +I  FC+ GR++ A E    MI  G   ++  Y T++    + G +++AL +  ++ + 
Sbjct: 369 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 428

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G  PN+  YN+    L++ GD   AL ++ +M+   I PD  TY+ +   LCR G V +A
Sbjct: 429 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKA 488

Query: 414 FKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
           F+L   +          +YNI++   CK++ +  A  +L SM+  G  P+  TY  LI+G
Sbjct: 489 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548

Query: 474 YCKGGNIEGAVQVYENMKKV 493
               G    A+++  ++ ++
Sbjct: 549 IGFAGYRAEAMELANDLVRI 568



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 39/323 (12%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ ++R   + G  + A+++I+ L++KG    + ++N  L  L+   +     KL  +M
Sbjct: 261 TYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S     NV T++++I  LC++ K+EEA++L   M + G+ P+   ++ +I   C+ G L
Sbjct: 321 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 380

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A++       M  D  LP+ V +N ++   CK G+ + A EI   + + G   N  +Y
Sbjct: 381 DVAIEFLE---TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 437

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG-------------- 373
            T+       G    AL +  EMV  G+ P+ + YNS I  L  EG              
Sbjct: 438 NTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRS 497

Query: 374 ---------------------DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
                                 +E A+ VL  M+     P+  TY++L +G+   G   +
Sbjct: 498 CEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAE 557

Query: 413 AFKLHNQVLEEHMVGDAYSYNIL 435
           A +L N ++  + + + YS+  L
Sbjct: 558 AMELANDLVRINAISE-YSFKRL 579


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 250/504 (49%), Gaps = 6/504 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+  L+ A       E A   ++K+K +G  +S+  ++  +S   K          ++E 
Sbjct: 348 VYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEA 407

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N   +  +IYA C+ C +++A +L   M + GI   +  ++ +++    VGD 
Sbjct: 408 KEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDE 467

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  L +F +        + P+ +T+ C+IN + KLG+V  A E+   M  AGI  N++TY
Sbjct: 468 DKCLLVFERFKECG---LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTY 524

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LI+G+ +      A  + ++++K G+ P+ V+YN+ I      G ++ A+  + +M  
Sbjct: 525 SMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQK 584

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +   P   T+  +  G  R G +K+A  + + +     +   ++YN LI  L +   +  
Sbjct: 585 QRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEK 644

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A+Q+L  M + G+ P+  TY T++ GY   G+   A   +  ++    + ++  Y +++ 
Sbjct: 645 AEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLK 704

Query: 508 GLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
             CK   + +A ++ +  ++Q I   +   YN LI+G+   G I EA  +  +M+  G+ 
Sbjct: 705 ACCKSGRMQSALAVTKEMSAQNIPR-NTFIYNILIDGWARRGDIWEAADLMQQMKREGVQ 763

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            +   Y   IN   K G  Q+A + ++ M   G+ P+  TYTTL+  +++   PE+ +  
Sbjct: 764 PDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSC 823

Query: 626 HDDMVLSGVSPDNQTYNAIISPLL 649
            ++M LSG+ PD   Y+ +++ LL
Sbjct: 824 FEEMKLSGLKPDRAVYHCLMTSLL 847



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 196/404 (48%), Gaps = 4/404 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  ++   T +G  +    V ++ K  G + S+  +   ++   KL ++ +  ++ KEM
Sbjct: 453 IYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM 512

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G   N+ T++++I    K      A +++  ++K GI P+VV +N II   C +G +
Sbjct: 513 EHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKM 572

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+   ++M         P + T   II+GF + G ++ A ++   M  +G    V TY
Sbjct: 573 DRAVCTVKEM---QKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTY 629

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G       E+A ++ DEM   G+ PN   Y + +H   + GD   A    + + D
Sbjct: 630 NALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRD 689

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  D +TY  L K  C++G ++ A  +  ++  +++  + + YNILI+   +  ++  
Sbjct: 690 EGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWE 749

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L+  M   G+ PDI TY + I+   K G+++ A +  E MK V  KPN+  Y ++IN
Sbjct: 750 AADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLIN 809

Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
           G  + +  + A S  +  +  GL  D   Y+ L+        +A
Sbjct: 810 GWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVA 853



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 219/461 (47%), Gaps = 4/461 (0%)

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +++  +  ++ R  + +++M + G   + + +  +I+A      +EEALS   +M + G
Sbjct: 317 MVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 376

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           I  ++V ++++++   + G+ E A   F++       S L N++ +  II  +C+   ++
Sbjct: 377 IEMSLVTYSILVSGFAKTGNAESADHWFQE--AKEKHSSL-NAIIYGNIIYAYCQRCNMD 433

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            AE +   M + GID  +  Y T++DGY   G  ++ L + +   + GL P+ + Y   I
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLI 493

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +     G V  AL V  +M    I  +  TYS+L  G  +      AF +   ++++ + 
Sbjct: 494 NLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIK 553

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D   YN +I   C    +  A   +  M  +   P   T+  +I G+ + G ++ A+ V
Sbjct: 554 PDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDV 613

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           ++ M+     P +  YN++I GL +   ++ A+ +L      G+  +  TY T+++GY  
Sbjct: 614 FDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYAS 673

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G   +AF  F+++R+ G+ ++   Y  L+   CK G  Q A  + K M    I  +   
Sbjct: 674 LGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFI 733

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           Y  L+  +++     E  +L   M   GV PD  TY + I+
Sbjct: 734 YNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFIN 774



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 158/332 (47%), Gaps = 1/332 (0%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           + Y  +++ Y R G    A    ++M  RG+ P++ VY + IH      D+E AL  +  
Sbjct: 312 KEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRK 371

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M ++ I     TYSIL  G  + G  + A     +  E+H   +A  Y  +I   C+  N
Sbjct: 372 MKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCN 431

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ L+  M   G+   I  Y T++DGY   G+ +  + V+E  K+    P+++ Y  
Sbjct: 432 MDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC 491

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN   K   +  A  + +  +  G+   + TY+ LING+      A AFA+F ++   G
Sbjct: 492 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 551

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I  + V YN +I   C  G   +A   +K M      P   T+  ++  F++    ++ +
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 611

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
           ++ D M +SG  P   TYNA+I  L+ ++  E
Sbjct: 612 DVFDMMRMSGCIPTVHTYNALILGLVEKRKME 643



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 1/260 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P    Y ++     R G + +A +   ++    +   ++ Y  LI+      ++  A   
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M   G+   ++TY  L+ G+ K GN E A   ++  K+     N +IY +II   C+
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428

Query: 512 DASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             ++D A++L++  +  G+   I  Y+T+++GY + G   +   +F   +  G+  + + 
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT 488

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LIN   K G   +A E+ K M   GI  +  TY+ L+  F K         + +D++
Sbjct: 489 YGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 548

Query: 631 LSGVSPDNQTYNAIISPLLG 650
             G+ PD   YN II+   G
Sbjct: 549 KDGIKPDVVLYNNIITAFCG 568



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 156/358 (43%), Gaps = 5/358 (1%)

Query: 89  RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV 148
           + S +LE S  + H  +       ++L+ G L   +  +     E L+   +  K    +
Sbjct: 501 KVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIK--DGIKPDVVL 558

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++ ++ A   +G  + A   +++++ + H  +   +   +    +  E+ +   ++  M 
Sbjct: 559 YNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMR 618

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G +  V+T+N +I  L ++ K+E+A  +   M  +G+ PN   +  I++    +GD  
Sbjct: 619 MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTG 678

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A   F K   +  + +  +  T+  ++   CK GR++ A  +   M    I  N   Y 
Sbjct: 679 KAFTYFTK---LRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYN 735

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            LIDG+AR G   EA  L  +M + G+ P+   Y S I+     GD++ A   + +M   
Sbjct: 736 ILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSV 795

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            + P+  TY+ L  G  R    ++A     ++    +  D   Y+ L+  L     +A
Sbjct: 796 GVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVA 853


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 241/498 (48%), Gaps = 4/498 (0%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
             A +R   Q G    A DV+ +++ +G       +++ ++      +  R  +L   M 
Sbjct: 154 LKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMA 213

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
           + G   +V T++  I A  K  + +EA+ L   M   G+ PNV+ ++  I+   + G  E
Sbjct: 214 ARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWE 273

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ L ++M  +    + P+ +T++ +I+   K G+ E A  +   M   G+  N+ TY+
Sbjct: 274 TAVDLLKEMPAVG---LAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYS 330

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            +I   A+ G  EEA+ L  EM + G+ P+ + Y+STI     +G  E A+ +L +M  +
Sbjct: 331 IVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPME 390

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+  +Y I+     + G  ++A  L  ++    +  D  +Y+  I+   +++    A
Sbjct: 391 GVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQA 450

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             LL  M   GL P++I+Y + ID   K G  + AV++   M      P+++ Y+++I  
Sbjct: 451 LWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS 510

Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
                  + A  L +  QR G+  D ++ NT IN     G   EA  +  EM  +G+  +
Sbjct: 511 CAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPD 570

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y   I+   K   +++  +L++ M   G+ PD ++Y   ++  S +   +E + L  
Sbjct: 571 AISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLR 630

Query: 628 DMVLSGVSPDNQTYNAII 645
           DM+  G+SPD  TYN+ I
Sbjct: 631 DMLAVGLSPDVVTYNSAI 648



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 217/467 (46%), Gaps = 11/467 (2%)

Query: 188 LSHL-VKLNEIGRF--WK----LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
           +SHL   L E  ++  W+    +   M   G   +   ++  I A     + E A+ L  
Sbjct: 151 MSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLA 210

Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
            M   G  P+V+ ++  I    +V   + A+ L R M    G  V PN + ++  I+   
Sbjct: 211 SMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSM---KGQGVKPNVIVYSAAISACR 267

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
           K G+ E A ++   M   G+  +V TY+T+ID  A+ G  E A RL  EM  +G++ N +
Sbjct: 268 KGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANII 327

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            Y+  I      G  E A+ +L +M +  + PD  TYS       + G  ++A  L  ++
Sbjct: 328 TYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM 387

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
             E +  +A SY I+I+   K      A  LL  M   G+ PD+I Y   ID   +    
Sbjct: 388 PMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRW 447

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
           E A+ +   M      PN++ YNS I+   K      A  LL+     GL  D ITY+ +
Sbjct: 448 EQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAV 507

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I    +  +  EA  +F EM+  GI  + V  N  IN   + G +++A +++  M   G+
Sbjct: 508 IASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGL 567

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +PD ++Y T +   +K    +E+I+L  +M   G++PD  +Y   +S
Sbjct: 568 VPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMS 614



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 230/500 (46%), Gaps = 6/500 (1%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVI 169
           D L     + +   VS  +   GLL S +     P   V+ A + AC + G  E A D++
Sbjct: 220 DVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLL 279

Query: 170 QKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKE 229
           +++   G +  +  ++  +    K  +    ++L  EM + G V N+ T+++VI A  K 
Sbjct: 280 KEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKW 339

Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
            + EEA++L   M ++G+ P+V+ ++  I+   + G  E A+ L R+M +   + V PN+
Sbjct: 340 GQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPM---EGVTPNA 396

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
           +++  +I+   K GR   A ++   M   G+  +V  Y+  ID  A+    E+AL L  E
Sbjct: 397 ISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLRE 456

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M   GL PN + YNS I      G  + A+ +L +M    + PD  TYS +         
Sbjct: 457 MPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQ 516

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
            ++A  L  ++  + +  D  S N  IN   +      A  +L  M   GL+PD I+Y T
Sbjct: 517 WEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRT 576

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
            ID   KG   +  + +   M  V   P+ + Y   ++    D     A  LL+    +G
Sbjct: 577 AIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG 636

Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L  D +TYN+ IN     G+  EA  +  +M   G+A +   +N  I+       +  A 
Sbjct: 637 LSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAV 696

Query: 589 ELMKVMILHGIIPDYVTYTT 608
           E++  M   G+ P+  TY T
Sbjct: 697 EVLFEMRALGVSPNEATYLT 716


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 253/509 (49%), Gaps = 6/509 (1%)

Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
           + T  V+ +L+ A       E A    +K+K +G  +S+  ++  +    K+       +
Sbjct: 338 EPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADR 397

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
            +KE        N   +  +IYA C+ C +++A +L   M   GI   +  ++ +++   
Sbjct: 398 WFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYT 457

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
            VG+ E  L +F ++         P+ V++ C+IN + K+G++  A E+   M  AGI  
Sbjct: 458 MVGNEEKCLTVFERLKECG---FAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKH 514

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N++TY+ LI+G+ +      A  + +++VK GL P+ V+YN+ I      G ++ A+ ++
Sbjct: 515 NMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMV 574

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
            +M  +   P   T+  +  G  R G +K+A  + + +     +   +++N LI  L + 
Sbjct: 575 KEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEK 634

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A ++L  M + G+ P+  TY T++ GY   G+   A + +  ++    + ++  Y
Sbjct: 635 RQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTY 694

Query: 503 NSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
            +++   CK   + +A ++ +  ++Q I   +   YN LI+G+   G + EA  +  +M+
Sbjct: 695 EALLKACCKSGRMQSALAVTKEMSAQNIPR-NTFVYNILIDGWARRGDVWEAADLMQQMK 753

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
             G+  +   Y   IN  CK G   +A ++M+ M   G+ P+  TYTTL+  +++   PE
Sbjct: 754 QGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPE 813

Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           + +    +M L+G+ PD   Y+ +++ LL
Sbjct: 814 KALRCFQEMKLAGLKPDKAVYHCLMTALL 842



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 202/407 (49%), Gaps = 4/407 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           ++  ++   T +G  E    V ++LK  G + S+ ++   ++   K+ +I +  ++ K M
Sbjct: 448 IYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMM 507

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   N+ T++++I    K      A +++  ++K G+ P+VV +N II   C +G +
Sbjct: 508 ESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTM 567

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           + A+ + ++M     +   P S T   II+GF + G ++ A ++   M ++G    V T+
Sbjct: 568 DRAICMVKEM---QKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTF 624

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LI G       E+A+ + DEM   G+ PN   Y + +H   A GD   A    + + D
Sbjct: 625 NALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRD 684

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + +  D +TY  L K  C++G ++ A  +  ++  +++  + + YNILI+   +  ++  
Sbjct: 685 EGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWE 744

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L+  M   G+ PDI TY + I+  CK G++  A ++ E M+    KPN+  Y ++I+
Sbjct: 745 AADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIH 804

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
           G  + +  + A    Q  +  GL  D   Y+ L+        + EA+
Sbjct: 805 GWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAY 851



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 215/461 (46%), Gaps = 4/461 (0%)

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +S+  +  ++ R  + ++ M + G     + +  +I+A      +EEALS   +M + G
Sbjct: 312 MVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEG 371

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
           +  ++V +++I+    ++G+ + A + F++           N++ +  +I  +C+   ++
Sbjct: 372 VEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHM---NAIIYGNMIYAYCQTCNMD 428

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            AE +   M   GID  +  Y T++DGY   G+ E+ L + + + + G  P+ V Y   I
Sbjct: 429 QAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLI 488

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +     G +  AL V   M    I  +  TYS+L  G  +      AF +   V+++ + 
Sbjct: 489 NLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLK 548

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D   YN +I   C    +  A  ++  M      P   T+  +I G+ + G ++ A+ V
Sbjct: 549 PDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDV 608

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFI 545
           ++ M++    P +  +N++I GL +   ++ A  +L      G+  +  TY T+++GY  
Sbjct: 609 FDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAA 668

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
            G   +AF  F+++R+ G+ ++   Y  L+   CK G  Q A  + K M    I  +   
Sbjct: 669 LGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFV 728

Query: 606 YTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           Y  L+  +++     E  +L   M   GV PD  TY + I+
Sbjct: 729 YNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFIN 769



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 159/357 (44%), Gaps = 36/357 (10%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R Y  ++  YAR G    A +  + M  RG+ P + VY S IH      D+E AL     
Sbjct: 307 REYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARK 366

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M ++ +     TYSI+  G  + G    A +   +  + H   +A  Y  +I   C++ N
Sbjct: 367 MKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCN 426

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ L+  M   G+   I  Y T++DGY   GN E  + V+E +K+    P++V Y  
Sbjct: 427 MDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGC 486

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN   K   +  A  + +  +  G+   + TY+ LING+      A AFA+F ++   G
Sbjct: 487 LINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDG 546

Query: 564 IAVNKVGYNILINFLCKFGCYQQA----RELMK----------VMILHGI---------- 599
           +  + V YN +I   C  G   +A    +E+ K          + I+HG           
Sbjct: 547 LKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 606

Query: 600 -----------IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
                      IP   T+  L+    +    E+ IE+ D+M L+GVSP+  TY  I+
Sbjct: 607 DVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIM 663



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 148/325 (45%), Gaps = 9/325 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +++ ++RA   +G  + A  ++++++ + H  +   +   +    +  E+ R   ++  M
Sbjct: 553 LYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMM 612

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G +  V+TFN +I  L ++ ++E+A+ +   M  +G+ PN   +  I++    +GD 
Sbjct: 613 RRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDT 672

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A + F K   +  + +  +  T+  ++   CK GR++ A  +   M    I  N   Y
Sbjct: 673 GKAFEYFTK---LRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVY 729

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             LIDG+AR G   EA  L  +M + G+ P+   Y S I+     GD+  A  ++ +M  
Sbjct: 730 NILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMET 789

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+  TY+ L  G  R    ++A +   ++    +  D   Y+ L+  L     +  
Sbjct: 790 SGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRATVTE 849

Query: 448 AK------QLLSSMIVRGLIPDIIT 466
           A        +   MI  GLI D+ T
Sbjct: 850 AYVRPGILSICKEMIESGLIVDMGT 874



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P    Y ++     R G + +A +    +    +   ++ Y  LI+      ++  A   
Sbjct: 304 PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSC 363

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M   G+   ++TY  ++ G+ K GN + A + ++  K      N +IY ++I   C+
Sbjct: 364 ARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQ 423

Query: 512 DASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             ++D A++L++  +  G+   I  Y+T+++GY + G   +   +F  ++  G A + V 
Sbjct: 424 TCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVS 483

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LIN   K G   +A E+ K+M   GI  +  TY+ L+  F K         + +D+V
Sbjct: 484 YGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVV 543

Query: 631 LSGVSPDNQTYNAIISPLLG 650
             G+ PD   YN II    G
Sbjct: 544 KDGLKPDVVLYNNIIRAFCG 563


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 214/433 (49%), Gaps = 5/433 (1%)

Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
           CK  K  E+L     ++  G  P+V+    +I       ++E   K  R M ++   +  
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE---KASRVMEILESHTE- 134

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           P+   +N +I+GFCK+ R+E A ++   M   G   ++ TY  +I           AL++
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D+++    MP  + Y   I     EG +  A+ +L +M+ + + PD +TY+ + +G+C+
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G V++A +L   +  +    D  SYNIL+            ++L++ M  RG  P+ +T
Sbjct: 255 EGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 314

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI   C+ G I+ A+ V + M + E  P+   Y+ +I+ LCK+  LD A  ++    
Sbjct: 315 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 374

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G L D + YNT++     NG   +A  +F+++R +G   N   YN +I+ L   G   
Sbjct: 375 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 434

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +A  ++  MI  G+ PD +TY +L++   ++   EE I L DDM  SG  P   +YN ++
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 646 SPLLGEKSAEDQV 658
             L   +  +D +
Sbjct: 495 LGLCKVRRIDDAI 507



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 228/475 (48%), Gaps = 11/475 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
           L FLE L++       TP V     L++        E A  V++ L+       + A+N 
Sbjct: 88  LYFLECLVNK----GYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEP-DVFAYNA 142

Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
            +S   K+N I    ++   M + G++ ++ T+N++I +LC   KL  AL +  ++L   
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202

Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
             P V+ + ++I      G +  A+KL  +   M    +LP+  T+N II G CK G VE
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEE---MLARGLLPDMYTYNAIIRGMCKEGMVE 259

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
            A E+  ++   G   +V +Y  L+  +   G  +E  +L  EM  RG  PN V Y+  I
Sbjct: 260 RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
             L   G ++ A+ VL  MI+K + PD ++Y  L   LC+ G +  A  + + ++    +
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 379

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            D  +YN ++  LCK+ N   A ++ + +   G  P++ +Y T+I      G+   A+ +
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 439

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFI 545
              M      P+ + YNS+I+ LC+D  ++ A  LL   ++ G     I+YN ++ G   
Sbjct: 440 VPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 499

Query: 546 NGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
             +I +A  MF+EM   G   N+  Y +LI  +   G   +A EL   +    +I
Sbjct: 500 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 235/482 (48%), Gaps = 12/482 (2%)

Query: 172 LKVKGHSVSIHAWNNFLSHLVKL----NEIGRF-WKLY--KEMVSCGYVENVNTFNLVIY 224
           +  +     + +++   +HL+KL     + G+F   LY  + +V+ GY  +V     +I 
Sbjct: 52  VSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIK 111

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
                  +E+A S    +L+S   P+V  +N +I+  C+V  +E A ++  +M       
Sbjct: 112 GFFNFKNIEKA-SRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRM---KARG 167

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
            LP+ VT+N +I   C   ++  A ++   ++       V TY  LI+     G   EA+
Sbjct: 168 FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAM 227

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L +EM+ RGL+P+   YN+ I  +  EG VE A  +++ +  K   PD  +Y+IL +  
Sbjct: 228 KLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAF 287

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
              G   +  KL  ++       +  +Y+ILI+ LC+   +  A  +L  MI + L PD 
Sbjct: 288 LNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDT 347

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
            +Y  LI   CK G ++ A+ + + M      P++V YN+I+  LCK+ + + A  +   
Sbjct: 348 YSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNK 407

Query: 525 SQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            + +G    ++ YNT+I+  +  G  + A  M   M + G+  +++ YN LI+ LC+ G 
Sbjct: 408 LRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGL 467

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
            ++A  L+  M   G  P  ++Y  ++    K    ++ I +  +M+  G  P+  TY  
Sbjct: 468 VEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYIL 527

Query: 644 II 645
           +I
Sbjct: 528 LI 529



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 123/302 (40%), Gaps = 52/302 (17%)

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQ----VLEEHMVGDAYSYNI-------LINYLCKS 442
           H T SI+T   CRN      F   N     V  E       SY+        L+N  CK+
Sbjct: 26  HHT-SIVT---CRNPNPNDGFNSRNAPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKA 81

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
                +   L  ++ +G  PD+I    LI G+    NIE A +V E ++    +P++  Y
Sbjct: 82  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES-HTEPDVFAY 140

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLD------------------------------ 532
           N++I+G CK   ++AA  +L   +  G L                               
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200

Query: 533 ------AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
                  ITY  LI    + G I EA  +  EM   G+  +   YN +I  +CK G  ++
Sbjct: 201 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVER 260

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A EL+  +   G  PD ++Y  L+  F      +E  +L  +M   G  P+  TY+ +IS
Sbjct: 261 AAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILIS 320

Query: 647 PL 648
            L
Sbjct: 321 SL 322


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 249/527 (47%), Gaps = 29/527 (5%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F  +++   +    E    +  +++  G   S+  +N  L  L+  N       LY  M
Sbjct: 111 LFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNM 170

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S G   NV T+N+++ ALC+  K++ A  L   M   G  P+ V +  +I+  C++GD+
Sbjct: 171 KSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDV 230

Query: 268 ----EFALKL-----------------------FRKMGVMSGDSVLPNSVTHNCIINGFC 300
               E A+K                        F  M  M    V PN ++++ +I+   
Sbjct: 231 DKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLS 290

Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
            +G VE +  +   M   G   NV+T+ +LI G+   G   +A+ L + M++ G+ PN V
Sbjct: 291 DMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVV 350

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN+ IH L ++G+++ A+ V + M    I P+  TYS +  G  ++G +  A +  N++
Sbjct: 351 AYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKM 410

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           +      +   Y  +++ LC+ +    A  L+ +MI  G  P +IT+   I G C+ G +
Sbjct: 411 INCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRV 470

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTL 539
           E A+ V + M+K E  PN+  YN +++GL +  +   A  L++   +R    D +TYNT+
Sbjct: 471 EWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTI 530

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA-RELMKVMILHG 598
           + G+  NG   +   +  +M   GI ++ +  N  +N  CK G  + A + L  +     
Sbjct: 531 MYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKE 590

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
              D +T+T ++         EE +    +M+  G+ P+  T+N ++
Sbjct: 591 FRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLV 637



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 254/522 (48%), Gaps = 10/522 (1%)

Query: 126 VSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWN 185
           VS LE+ + L +S    K T   ++ ++    +    +G   ++Q++K++    S   + 
Sbjct: 55  VSSLEYFKSLSNSGTF-KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQ 113

Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
             +    + N   +  K++  +   G   +V  +NLV+ AL  +   +   +LY  M   
Sbjct: 114 FVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSE 173

Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
           G+ PNV  +N+++   CQ G ++ A KL  +M     D   P+ V++  +I+  CKLG V
Sbjct: 174 GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCD---PDDVSYTTVISSMCKLGDV 230

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
           + A E+  AM    +   V  Y  LI G  +    +EA  L +EMV RG+ PN + Y++ 
Sbjct: 231 DKAREL--AMKFEPV---VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTV 285

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
           I  L   G+VE +L V   M  +   P+  T++ L KG    G V  A  L N ++ E +
Sbjct: 286 ISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGV 345

Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
             +  +YN LI+ LC   N+  A  + + M    + P++ TY T+I G+ K G++  A +
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACE 405

Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYF 544
            +  M     +PN+V+Y  +++ LC+ +  D A  L+      G     IT+N  I G  
Sbjct: 406 TWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLC 465

Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
             G++  A  +  +M       N   YN L++ L +   +++A  L++ +    +  D V
Sbjct: 466 RAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCV 525

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           TY T++  FS N   ++V++L   M+++G+  D  T N  ++
Sbjct: 526 TYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVN 567



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 199/418 (47%), Gaps = 44/418 (10%)

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           E+ L ++YR+ + G  P+V  +N+++       D   +  LF+ +          N++ +
Sbjct: 126 EQGLKMFYRIREFGCEPSVKIYNLVL-------DALLSQNLFKMI----------NALYN 168

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N                     M   G++ NV TY  L+    + G  + A +L  EM  
Sbjct: 169 N---------------------MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSN 207

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +G  P++V Y + I  +   GDV+ A  +   M  + + P    Y+ L  G+C+    K+
Sbjct: 208 KGCDPDDVSYTTVISSMCKLGDVDKARELA--MKFEPVVP---VYNALIHGVCKECRFKE 262

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           AF L N++++  +  +  SY+ +I+ L    N+  +  +   M VRG  P++ T+ +LI 
Sbjct: 263 AFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIK 322

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G+   G +  AV ++  M +    PN+V YN++I+GLC D ++D A S+    ++  +  
Sbjct: 323 GFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRP 382

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
           +  TY+T+I G+  +G +  A   +++M N G   N V Y  +++ LC+   + QA +L+
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLI 442

Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
             MI  G  P  +T+   +    +    E  + + D M      P+ +TYN ++  L 
Sbjct: 443 DNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLF 500



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 186/401 (46%), Gaps = 43/401 (10%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
            V++AL+    +    + A+D++ ++  +G   ++ +++  +S L  +  +     ++  
Sbjct: 245 PVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGR 304

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M   G   NV TF  +I       ++ +A+ L+  M++ G+ PNVV +N +I+  C  G+
Sbjct: 305 MFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGN 364

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           ++ A+ ++ +M     DS+ PN  T++ II GF K G +  A E    MI  G   NV  
Sbjct: 365 MDEAISVWNQM---EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVV 421

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  ++D   +    ++A  L D M+  G  P  + +N+ I  L   G VE A+ VL D +
Sbjct: 422 YTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVL-DQM 480

Query: 387 DKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           +K+ C P+  TY+ L  GL R    ++A  L  ++ E  +  D  +YN ++     +   
Sbjct: 481 EKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMH 540

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK--------- 496
               QLL  M+V G+  D IT  T ++ YCK G ++ A++V +N+   EK+         
Sbjct: 541 QQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNIS-AEKEFRADIITHT 599

Query: 497 ----------------------------PNLVIYNSIINGL 509
                                       PN+  +N ++ G 
Sbjct: 600 IILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 176/361 (48%), Gaps = 10/361 (2%)

Query: 301 KLGRVEFAEEIRYAMIKAGID---CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
           KLGR    + + Y + +  ++   C+   +  +I  Y R    E+ L++   + + G  P
Sbjct: 83  KLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEP 142

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
           +  +YN  +  L ++   +    + ++M  + + P+ FTY++L K LC+NG V  A KL 
Sbjct: 143 SVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLL 202

Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
            ++  +    D  SY  +I+ +CK  ++  A++L  +M    ++P    Y  LI G CK 
Sbjct: 203 VEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL--AMKFEPVVP---VYNALIHGVCKE 257

Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TY 536
              + A  +   M      PN++ Y+++I+ L    +++ + ++       G    + T+
Sbjct: 258 CRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTF 317

Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
            +LI G+F+ G++ +A  +++ M   G++ N V YN LI+ LC  G   +A  +   M  
Sbjct: 318 TSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEK 377

Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
             I P+  TY+T++  F+K+       E  + M+  G  P+   Y  ++  +L + S  D
Sbjct: 378 DSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVD-VLCQMSMFD 436

Query: 657 Q 657
           Q
Sbjct: 437 Q 437



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 140/300 (46%), Gaps = 4/300 (1%)

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
           ++ Y + I  L    +++G  ++L  M  +++      +  + K   R+   +Q  K+  
Sbjct: 74  HLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFY 133

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           ++ E         YN++++ L   N       L ++M   GL P++ TY  L+   C+ G
Sbjct: 134 RIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNG 193

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
            ++GA ++   M      P+ V Y ++I+ +CK   +D A+ L    + +       YN 
Sbjct: 194 KVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPV----VPVYNA 249

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           LI+G     +  EAF + +EM + G+  N + Y+ +I+ L   G  + +  +   M + G
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG 309

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
             P+  T+T+L+  F       + + L + M+  GVSP+   YN +I  L  + + ++ +
Sbjct: 310 CRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAI 369



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 4/246 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+    V+  +V    Q+   + A+D+I  +   G   ++  +NNF+  L +   +    
Sbjct: 415 CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAM 474

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +  +M     + N+ T+N ++  L +     EA  L   + +  +  + V +N I+   
Sbjct: 475 NVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGF 534

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAM-IKAGI 320
              G  +  L+L  KM V   + +  +++T N  +N +CKLG+V+ A ++   +  +   
Sbjct: 535 SFNGMHQQVLQLLGKMLV---NGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEF 591

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             ++ T+  ++ G      +EEA+    EM+KRG+ PN   +N  +   F++    G + 
Sbjct: 592 RADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIR 651

Query: 381 VLSDMI 386
           +L D+I
Sbjct: 652 ILDDII 657


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 231/475 (48%), Gaps = 9/475 (1%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVN-TFNLVIYALCKECKLEE 234
           G   S  ++N  LS L + +       LY+ MV    V     TF +   ALC+  +  E
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           AL+L   M + G  P+ V +  +I+  C  G +  A  L  +M +M   +   +  T + 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAA---DVNTFDD 250

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
           ++ G C LGRV  A  +   M+  G    V TY  L+ G  R   ++EA      M+ R 
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRV 306

Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
              N V++N+ I    AEG +  A  +   M  K   PD  TYSIL  GLC+ G +  A 
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
           +L  ++ ++    +  +Y I+++  CK+      + LL  M  +GL  +   Y  +I   
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DA 533
           CK G ++ A+ + + M+     P++  YN+II  LC +  ++ A+ + +     G++ + 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
           ITYNT+I+    +G+  +A  +  EM   G +++ V YN LI  +CK G   ++  L++ 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           M   GI P+ V+Y  L++   K     + +EL   M+  G++PD  TYN +I+ L
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 231/452 (51%), Gaps = 10/452 (2%)

Query: 142 CKATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
           C     ++  ++ A C Q G TE A  ++ ++ + G +  ++ +++ +  +  L  +   
Sbjct: 206 CVPDAVLYQTVIHALCDQGGVTEAAT-LLNEMLLMGCAADVNTFDDVVRGMCGLGRVREA 264

Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
            +L   M++ G +  V T+  ++  LC+  + +EA ++  R+ +     NVV FN +I  
Sbjct: 265 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGG 320

Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
               G L  A +L+  MG+       P++ T++ +++G CKLGR+  A  +   M K G 
Sbjct: 321 CLAEGKLAEATELYETMGL---KGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGF 377

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             NV TY  ++  + + G  ++   L +EM  +GL  N+  YN  I+ L  +G ++ A+ 
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMG 437

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           ++ +M  +   PD  +Y+ +   LC N  +++A  +   +LEE +V +  +YN +I+ L 
Sbjct: 438 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALL 497

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           +      A +L   MI+ G   D+++Y  LI   CK GN++ ++ + E M +   KPN V
Sbjct: 498 RDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 557

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN +I+ LCK+  +  A  L +     GL  D +TYNTLING    G +  A  +  ++
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
            N  +  + + YNILI++ CK      A  L+
Sbjct: 618 HNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 228/500 (45%), Gaps = 11/500 (2%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V   L RA     A      ++ + +V   + +       L  L + NE      L + M
Sbjct: 145 VLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEA---LALLRGM 201

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
              G V +   +  VI+ALC +  + EA +L   ML  G   +V  F+ ++   C +G +
Sbjct: 202 ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRV 261

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A +L  +M        +P  +T+  ++ G C   RV  A+E R AM+    + NV  +
Sbjct: 262 REAARLVDRMMT---KGCMPGVMTYGFLLQGLC---RVRQADEAR-AMLGRVPELNVVLF 314

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
            T+I G    G   EA  L + M  +G  P+   Y+  +H L   G +  A+ +L +M  
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           K   P+  TY+I+    C+NG       L  ++  + +  ++  YN +I  LCK   +  
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  L+  M  +G  PDI +Y T+I   C    +E A  ++EN+ +     N + YN+II+
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            L +D     A  L +     G  LD ++YN LI     +G +  +  +  EM   GI  
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V YNILI+ LCK    + A EL K M+  G+ PD VTY TL+    K       + L 
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
           + +    V PD  TYN +IS
Sbjct: 615 EKLHNENVHPDIITYNILIS 634



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 219/450 (48%), Gaps = 9/450 (2%)

Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMIINEACQVGDLEF 269
           G   +  ++N+V+  L +     +AL+LY RM+ +  + P    F +     C++G    
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193

Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
           AL L R M   +    +P++V +  +I+  C  G V  A  +   M+  G   +V T+  
Sbjct: 194 ALALLRGM---ARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
           ++ G    G   EA RL D M+ +G MP  + Y   +  L      + A  +L  + + +
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310

Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
           +      ++ +  G    G + +A +L+  +  +    DA++Y+IL++ LCK   +++A 
Sbjct: 311 V----VLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
           +LL  M  +G  P+++TY  ++  +CK G  +    + E M       N   YN +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
           CKD  +D A  L+Q  +  G   D  +YNT+I     N ++ EA  MF  +   G+  N 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           + YN +I+ L + G +Q A  L K MILHG   D V+Y  L+    K+ + +  + L ++
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 629 MVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           M   G+ P+N +YN +IS L  E+   D +
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDAL 576



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 3/312 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     +  L+    ++G    A  ++++++ KG + ++  +   L    K        
Sbjct: 342 CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 401

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L +EM + G   N   +N +IYALCK+ +++EA+ L   M   G  P++  +N II   
Sbjct: 402 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 461

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C    +E A  +F  +     + V+ N +T+N II+   + GR + A  +   MI  G  
Sbjct: 462 CNNEQMEEAEHMFENL---LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCS 518

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V +Y  LI    + G+ + +L L +EM ++G+ PNNV YN  I  L  E  V  AL +
Sbjct: 519 LDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALEL 578

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
              M+++ + PD  TY+ L  GLC+ G +  A  L  ++  E++  D  +YNILI++ CK
Sbjct: 579 SKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCK 638

Query: 442 SNNLAAAKQLLS 453
              L  A  LL+
Sbjct: 639 VRLLDDAAMLLN 650



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 137/262 (52%), Gaps = 3/262 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  +    +++++  KG +++   +N  +  L K   +     L +EM S G   ++ ++
Sbjct: 395 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 454

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +IY LC   ++EEA  ++  +L+ G+  N + +N II+   + G  + A++L ++M +
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM-I 513

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           + G S+  + V++N +I   CK G V+ +  +   M + GI  N  +Y  LI    +   
Sbjct: 514 LHGCSL--DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 571

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             +AL L  +M+ +GL P+ V YN+ I+ L   G +  AL +L  + ++++ PD  TY+I
Sbjct: 572 VRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNI 631

Query: 400 LTKGLCRNGCVKQAFKLHNQVL 421
           L    C+   +  A  L N+ +
Sbjct: 632 LISWHCKVRLLDDAAMLLNRAM 653



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 86/177 (48%), Gaps = 17/177 (9%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           I+H L+   R+ DA+ L   ++          L G       C      ++ L++A  + 
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMI----------LHG-------CSLDVVSYNGLIKAMCKD 534

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + +  +++++  KG   +  ++N  +S L K   +    +L K+M++ G   ++ T+
Sbjct: 535 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 594

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
           N +I  LCK   +  AL+L  ++    + P+++ +N++I+  C+V  L+ A  L  +
Sbjct: 595 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 212/417 (50%), Gaps = 4/417 (0%)

Query: 93  SLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDA 151
           +L S C ++H L   +   +A  L+  ++S     S       + ++    ++   VF  
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 60

Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
           L+ A  + G    A +  +        V        L HL+KL      W  Y+E++ CG
Sbjct: 61  LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           Y  ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   ++GDL+   
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG- 179

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
             FR    M    V P+  T++ +ING CK  + + A E+   M+  G+  N   + TLI
Sbjct: 180 --FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLI 237

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
           DG+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M  K + 
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLK 297

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           PD  TY+ L  G C+ G +  AF+   ++++E+   D   Y  LI+ LC       A+++
Sbjct: 298 PDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKM 357

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
           L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 358 LREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 155/300 (51%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +L   +  D Y+Y++LIN  CK +    A +L   M+V+GL+P+ + +
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 233

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSX 293

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M      +++V Y  LI+ LC  G    
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVD 353

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K     +  +L  +M   G  P   TYN +++
Sbjct: 354 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 107 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTL 166

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +ING CK++  D A  L       GL
Sbjct: 167 MNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGL 226

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + + + TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 227 VPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 286

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M   G+ PD +TYTTL+    K    +   E    M+      D   Y A+IS L 
Sbjct: 287 LIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLC 346

Query: 650 GEKSAED 656
            E  + D
Sbjct: 347 XEGRSVD 353


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 253/504 (50%), Gaps = 6/504 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           VF +LV A        G    ++++K +G  ++I  ++  ++   K+N+      L+KE 
Sbjct: 306 VFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEA 365

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            +     N   ++ +I+A C+   ++ A  L   M + GI   +  ++ +++    + D 
Sbjct: 366 KAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDE 425

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           +  L +F ++         P+ +++ C+IN + K+G+V  A  I   M   GI  N +TY
Sbjct: 426 KKCLIVFERLKECC---FTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTY 482

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LI G+        A  + +EM+K GL P+  +YN  I      G+++ A+ +L  M  
Sbjct: 483 SMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQK 542

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + + P +  +  + +G    G +K+A  + + +          +YN LI+ L K N +  
Sbjct: 543 ERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVER 602

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L+ M + G+ P+  TY  ++ GY   G+I  A + +  +K+   K ++ IY +++ 
Sbjct: 603 AVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLR 662

Query: 508 GLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
             CK   + +A ++ +  ++Q+I   +   YN LI+G+   G + EA  +  +M+  G+ 
Sbjct: 663 ACCKSGRMQSALAVTREMSTQKIAR-NTFVYNILIDGWARRGDVWEAADLMKQMKEDGVP 721

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            N   Y   IN  CK G  Q+A+++++ M   G+ P+  TYTTL+  ++K   P+  ++ 
Sbjct: 722 PNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKS 781

Query: 626 HDDMVLSGVSPDNQTYNAIISPLL 649
            ++M L+G+ PD   Y+ +++ LL
Sbjct: 782 FEEMKLAGLKPDEAAYHCLVTSLL 805



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/558 (22%), Positives = 248/558 (44%), Gaps = 55/558 (9%)

Query: 66  VVSEFRKSPK-------LALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMG 118
           VVS F + PK       L + +Y   G+ +    + E+  A        R  +    +  
Sbjct: 257 VVSAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRA--------RGIEPNAFVFT 308

Query: 119 NLMSANSVSPLEFLEGLLDSYEICKA-----TPAVFDALVRACTQIGATEGAYDVIQKLK 173
           +L+ A +V+    + G+L   E  KA     T   +  ++    +I   + A ++ ++ K
Sbjct: 309 SLVHAYAVA--RDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAK 366

Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLE 233
            K   ++   ++N +    +   + R  +L +EM   G    ++ ++ +++        +
Sbjct: 367 AKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEK 426

Query: 234 EALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG-------------VM 280
           + L ++ R+ +    P+++ +  +IN   ++G +  A+ + ++M              ++
Sbjct: 427 KCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLI 486

Query: 281 SG-------------------DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           SG                     + P+   +N +I  FCK+G ++ A  I   M K  + 
Sbjct: 487 SGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQ 546

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            + R +  +I+G+A  G  + AL + D M + G  P  + YN+ IH L  +  VE A+ V
Sbjct: 547 PSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSV 606

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L+ M    I P+  TY+I+ +G   NG + +AF+   ++ E  +  D Y Y  L+   CK
Sbjct: 607 LNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCK 666

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           S  + +A  +   M  + +  +   Y  LIDG+ + G++  A  + + MK+    PN+  
Sbjct: 667 SGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHT 726

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMR 560
           Y S IN  CK   +  A+ +++    +GL   + TY TLI G+        A   F EM+
Sbjct: 727 YTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMK 786

Query: 561 NVGIAVNKVGYNILINFL 578
             G+  ++  Y+ L+  L
Sbjct: 787 LAGLKPDEAAYHCLVTSL 804



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 208/444 (46%), Gaps = 4/444 (0%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           ++ M + G   N   F  +++A      +   LS    M   GI   +V +++II    +
Sbjct: 292 FENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAK 351

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
           + D + A  LF++     GD    N + ++ II+  C+ G ++ AEE+   M + GID  
Sbjct: 352 INDAQSADNLFKEAKAKLGDL---NGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAP 408

Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
           +  Y +++ GY      ++ L + + + +    P+ + Y   I+     G V  A+ +  
Sbjct: 409 IDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISK 468

Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
           +M    I  ++ TYS+L  G         AF +  ++L+  +  D   YN+LI   CK  
Sbjct: 469 EMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMG 528

Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
           N+  A ++L  M    + P    +  +I+G+   G+++ A+ + + M++    P ++ YN
Sbjct: 529 NMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYN 588

Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
           ++I+GL K   ++ A S+L      G+  +  TY  ++ GY  NG I +AF  F++++  
Sbjct: 589 ALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEG 648

Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
           G+ ++   Y  L+   CK G  Q A  + + M    I  +   Y  L+  +++     E 
Sbjct: 649 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEA 708

Query: 623 IELHDDMVLSGVSPDNQTYNAIIS 646
            +L   M   GV P+  TY + I+
Sbjct: 709 ADLMKQMKEDGVPPNIHTYTSYIN 732



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 185/376 (49%), Gaps = 5/376 (1%)

Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           C  TP++  +  L+    +IG    A  + ++++  G   +   ++  +S  + L++   
Sbjct: 438 CCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFAN 497

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + +++EM+  G   +   +NL+I A CK   ++ A+ +  +M K  + P+   F  II 
Sbjct: 498 AFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE 557

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
                GD++ AL +   + +M      P  +T+N +I+G  K  +VE A  +   M  AG
Sbjct: 558 GFAVAGDMKRALNI---LDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAG 614

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N  TY  ++ GYA  G   +A     ++ + GL  +  +Y + +      G ++ AL
Sbjct: 615 ITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSAL 674

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            V  +M  + I  + F Y+IL  G  R G V +A  L  Q+ E+ +  + ++Y   IN  
Sbjct: 675 AVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINAC 734

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+ ++  A++++  M   GL P++ TY TLI G+ K    + A++ +E MK    KP+ 
Sbjct: 735 CKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDE 794

Query: 500 VIYNSIINGLCKDASL 515
             Y+ ++  L   A++
Sbjct: 795 AAYHCLVTSLLSRATV 810



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 158/337 (46%), Gaps = 5/337 (1%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R +  +I  YA+ G    A    + M  RG+ PN  V+ S +H      D+ G L  + +
Sbjct: 270 REFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEE 329

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD--AYSYNILINYLCKS 442
           M  + I     TYSI+  G  +    + A  L  +   +  +GD     Y+ +I+  C+S
Sbjct: 330 MKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEA--KAKLGDLNGIIYSNIIHAHCQS 387

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N+  A++L+  M   G+   I  Y +++ GY    + +  + V+E +K+    P+++ Y
Sbjct: 388 GNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISY 447

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
             +IN   K   +  A ++ +  +  G+  +  TY+ LI+G+      A AF++F EM  
Sbjct: 448 GCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLK 507

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  ++  YN+LI   CK G   +A  +++ M    + P    +  ++  F+     + 
Sbjct: 508 SGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKR 567

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            + + D M  SG +P   TYNA+I  L+ +   E  V
Sbjct: 568 ALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAV 604


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 234/473 (49%), Gaps = 20/473 (4%)

Query: 104 LVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT-------PAV--FDALVR 154
           LV     D+AL L+G+    ++ +    ++ L  S    +A        P V  ++A+V 
Sbjct: 75  LVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVA 134

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
                G  + A  ++ ++ V+  +   + +N  +  L           +  EM+    V 
Sbjct: 135 GYCGAGQLDAARRLVAEMPVEPDA---YTYNTLIRGLCGRGRTANALAVLDEMLRRRCVP 191

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V T+ +++ A CK    ++A+ L   M   G  P++V +N+++N  CQ G ++ A++  
Sbjct: 192 DVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL 251

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
           + +     +   PN+V++N ++ G C   R E AEE+   M + G   NV T+  LI   
Sbjct: 252 KNLPSYGCE---PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 308

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            R G  E AL + +++ K G  PN++ YN  +H    +  ++ A+  L  M+ +   PD 
Sbjct: 309 CRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDI 368

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            +Y+ L   LCR+G V  A +L +Q+ ++       SYN +I+ L K+     A +LL+ 
Sbjct: 369 VSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE 428

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M+ +GL PDIITY T+  G C+   IE A++ +  ++ +  +PN V+YN+II GLCK   
Sbjct: 429 MVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 488

Query: 515 LDAAKSLLQASQRIG---LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
             +A  L   +  IG   + +  TY  LI G    G I EA  +  E+ + G+
Sbjct: 489 THSAIDLF--AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 221/486 (45%), Gaps = 51/486 (10%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
            + L  LV+  E+    +L    V      +  T   +I  L    +  EA     R + 
Sbjct: 69  GDRLRSLVRRGELDEALRL----VGSARRPDAGTCAALIKKLSASGRTAEA-----RRVL 119

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           +   P+V+ +N ++   C  G L+ A +L  +M       V P++ T+N +I G C  GR
Sbjct: 120 AACGPDVMAYNAMVAGYCGAGQLDAARRLVAEM------PVEPDAYTYNTLIRGLCGRGR 173

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
              A  +   M++     +V TY  L++   +    ++A++L DEM  +G  P+ V YN 
Sbjct: 174 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNV 233

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC------------------- 405
            ++ +  EG V+ A+  L ++      P+  +Y+I+ KGLC                   
Sbjct: 234 VVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 293

Query: 406 ----------------RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
                           R G V+ A ++  Q+ +     ++ SYN L++  CK   +  A 
Sbjct: 294 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 353

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             L  M+ RG  PDI++Y TL+   C+ G ++ AV++   +K     P L+ YN++I+GL
Sbjct: 354 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413

Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            K      A  LL      GL  D ITY+T+  G     +I +A   F +++++GI  N 
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 473

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V YN +I  LCK      A +L   MI +G +P+  TYT L+   +     +E  +L D+
Sbjct: 474 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 533

Query: 629 MVLSGV 634
           +   GV
Sbjct: 534 LCSRGV 539



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 207/424 (48%), Gaps = 16/424 (3%)

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
           + +L +  +L+EAL    R++ S   P+      +I +    G    A ++    G    
Sbjct: 72  LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACG---- 123

Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
               P+ + +N ++ G+C  G+++ A  +   M    ++ +  TY TLI G    G +  
Sbjct: 124 ----PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTAN 176

Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
           AL + DEM++R  +P+ V Y   +         + A+ +L +M DK   PD  TY+++  
Sbjct: 177 ALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVN 236

Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
           G+C+ G V  A +    +       +  SYNI++  LC +     A++L+  M  +G  P
Sbjct: 237 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 296

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           +++T+  LI   C+ G +E A++V E + K    PN + YN +++  CK   +D A + L
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
                 G   D ++YNTL+     +G++  A  +  ++++ G A   + YN +I+ L K 
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
           G  ++A EL+  M+  G+ PD +TY+T+     +    E+ I     +   G+ P+   Y
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 476

Query: 642 NAII 645
           NAII
Sbjct: 477 NAII 480



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 215/447 (48%), Gaps = 22/447 (4%)

Query: 168 VIQKLKVKGHSV-----------SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE-N 215
           +I+KL   G +             + A+N  ++      ++    +L  EM     VE +
Sbjct: 102 LIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMP----VEPD 157

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
             T+N +I  LC   +   AL++   ML+    P+VV + +++   C+    + A+KL  
Sbjct: 158 AYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLD 217

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M         P+ VT+N ++NG C+ GRV+ A E    +   G + N  +Y  ++ G  
Sbjct: 218 EM---RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC-PDH 394
                E+A  L  EM ++G  PN V +N  I +L  +G VE AL VL + I K+ C P+ 
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL-EQIPKYGCTPNS 333

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            +Y+ L    C+   + +A    + ++      D  SYN L+  LC+S  +  A +LL  
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           +  +G  P +I+Y T+IDG  K G  + A+++   M     +P+++ Y++I  GLC++  
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453

Query: 515 LDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           ++ A       Q +G+  + + YN +I G     +   A  +F+ M   G   N+  Y I
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513

Query: 574 LINFLCKFGCYQQARELMKVMILHGII 600
           LI  L   G  ++AR+L+  +   G++
Sbjct: 514 LIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 7/195 (3%)

Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
           PD  T   LI      G    A +V          P+++ YN+++ G C    LDAA+ L
Sbjct: 94  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRL 148

Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
           +  ++     DA TYNTLI G    G+ A A A+  EM       + V Y IL+   CK 
Sbjct: 149 V--AEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 206

Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
             Y+QA +L+  M   G  PD VTY  +V    +    ++ IE   ++   G  P+  +Y
Sbjct: 207 SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 266

Query: 642 NAIISPLLGEKSAED 656
           N ++  L   +  ED
Sbjct: 267 NIVLKGLCTAERWED 281


>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 683

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 234/487 (48%), Gaps = 49/487 (10%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + C  VE+     L  YA            ++ ++ + G+ P+   +N +I  + + G
Sbjct: 145 EELLCALVESWGRLGLAHYAH----------EVFVQVPRLGLRPSTAIYNAVIAASVRAG 194

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            ++ A   F++M     D   P+  T+N +++G C+ G V+ A  +   M +AGI  NV 
Sbjct: 195 AVDAAYLRFQQM---PADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVV 251

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  L+DG+      EEA+ + + M ++G+      Y S +H  F   + E A  +LS+ 
Sbjct: 252 TYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEW 311

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI--------- 436
           I+         Y  L   L +N   K+A +L  ++ +   +  + +++I+I         
Sbjct: 312 IESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLES 371

Query: 437 --------NYLCKSNNL------------------AAAKQLLSSMIVRGLIPDIITYGTL 470
                   +++ K  NL                  + A +  S M+  GL+  + +Y  +
Sbjct: 372 SDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIV 431

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ID + K G +E A++  + M++    PNLV +N++ING  K  ++  AK+ L+     GL
Sbjct: 432 IDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGL 491

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D IT+ +LI+G     ++ +AF  FSEM   G+  N   YN+LI+ LC  G   +A E
Sbjct: 492 MPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIE 551

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + GI PD  ++   +  F +    E+  +L +DM   GVSPD+ TYNA+I  L 
Sbjct: 552 LLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALC 611

Query: 650 GEKSAED 656
            E+  ++
Sbjct: 612 DERRVDE 618



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 178/370 (48%), Gaps = 11/370 (2%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A  V++++K KG S +   + + +    +  E  R +++  E +      +   ++ +
Sbjct: 267 EEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTL 326

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV---GDL-EFALKLFRKMG 278
           +Y L K    +EA+ L  +M K G       F+++I  A +V    DL E      +K G
Sbjct: 327 LYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGG 386

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +  D  +        II  F +   +  A +    M+  G+  +V +Y  +ID +A+ G
Sbjct: 387 NLGFDMYI-------MIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAG 439

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E AL     M + G  PN V +N+ I+     G+V  A   L  +++  + PD  T++
Sbjct: 440 EVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFT 499

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC    +  AF   +++ E  +  +  +YN+LI+ LC + +++ A +LL+ M + 
Sbjct: 500 SLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 559

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD  ++   I  +C+   IE A +++ +M +    P+   YN++I  LC +  +D A
Sbjct: 560 GITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 619

Query: 519 KSLLQASQRI 528
           K ++ A + I
Sbjct: 620 KEIILAMESI 629


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 250/511 (48%), Gaps = 7/511 (1%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           ++A+V    + G  E A  +   + V  ++   + +   +  L     I     +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNA---YTYFPVVRALCARGRIADALAVLDEMP 149

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G       +++++ A C+      A+ +   +   G   +V   N+++N  C  G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            AL L R +     +   P+ V++N ++ G C   R    +E+   M++     N+ T+ 
Sbjct: 210 KALHLLRDLPSFGCE---PDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFN 266

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
           TLI    R G  E    +  +M + G  P+  +Y + I  +  EG ++ A  +L+ M   
Sbjct: 267 TLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSY 326

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
            + P+   Y+ L KGLC     ++  +L  ++ ++    D  ++NIL+++ C++  +   
Sbjct: 327 GLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRV 386

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
            +LL  M+V G +PD+ITY T+I+G+CK G I+ AV + ++M     KPN + Y  ++ G
Sbjct: 387 IELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKG 446

Query: 509 LCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
           LC  +  +DA   + Q  Q+   L+ IT+NTLIN     G + +A  +  +M   G + +
Sbjct: 447 LCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 506

Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
            + Y+ +I+ L K G   +A EL+ VM+  G+ P+ + Y+++ +  S+     +VI++ D
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           ++  + +  D   YNA+IS L      E  +
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAI 597



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 4/493 (0%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C   P ++  ++ A  + G    A  V++ L  +G ++ +   N  L+ +     + +  
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            L +++ S G   +V ++N V+  LC   +      L   M++    PN+V FN +I+  
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           C+ G  E   ++   +  M+     P+   +  II+G CK G ++ A EI   M   G+ 
Sbjct: 273 CRNGLFE---RVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV  Y TL+ G       EE   L  EM  +    ++V +N  + +    G V+  + +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L  M+     PD  TY+ +  G C+ G + +A  L   +       +  SY I++  LC 
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +     A+ L+S MI +G   + IT+ TLI+  CK G +E A+++ + M      P+L+ 
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
           Y+++I+GL K    D A  LL      G+  + I Y+++ +     G+I +   MF  ++
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 569

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
           +  I  + V YN +I+ LCK G  ++A E +  M+  G +P+  TYT L+   +     +
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 629

Query: 621 EVIELHDDMVLSG 633
           E  E+  ++   G
Sbjct: 630 EAQEMLTELCSKG 642



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 126/301 (41%), Gaps = 40/301 (13%)

Query: 130 EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLS 189
           E L  + D  + C      F+ LV    Q G  +   ++++++ V G    +  +   ++
Sbjct: 353 ELLAEMFD--KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVIN 410

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
              K   I     L K M +CG   N  ++ +V+  LC   +  +A  L  +M++ G   
Sbjct: 411 GFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPL 470

Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
           N + FN +IN  C+ G +E A++L ++M V   +   P+ ++++ +I+G  K G+ + A 
Sbjct: 471 NPITFNTLINFLCKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGKTDEAL 527

Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGG------------------------------- 338
           E+   M+  G+  N   Y+++    +R G                               
Sbjct: 528 ELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSL 587

Query: 339 ----SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
                +E A+     MV  G +PN   Y   I  L +EG V+ A  +L+++  K     H
Sbjct: 588 CKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKH 647

Query: 395 F 395
            
Sbjct: 648 L 648


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 226/495 (45%), Gaps = 69/495 (13%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  +    +++ ++ A  Q  + + +     ++  KG     + +NN L+ +V  +   +
Sbjct: 88  ETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQ 147

Query: 200 FWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           +W+ + E  S   V+ +V +F +VI   C+  ++E++  L   + + G  PNVV +  +I
Sbjct: 148 WWRFFNE--SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLI 205

Query: 259 NEACQVGDLEFALKLFRKMGV--------------------------------MSGDSVL 286
           +  C+ G++E A  LF +MG                                 M  D V 
Sbjct: 206 DGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVF 265

Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
           PN  T+NC++N  CK GR + A ++   M + G+ CN+ TY TLI G  R   + EA ++
Sbjct: 266 PNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKV 325

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            D+M   G+ PN + YN+ I      G +  AL +  D+  + + P   TY+IL  G C+
Sbjct: 326 MDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCK 385

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
            G    A K+  ++ E  +     +Y ILI+   + +N+  A QL S M   GL PD+ T
Sbjct: 386 KGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHT 445

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           Y  LI G+C  G +  A ++++ M   + +PN VIYN+++ G CK+ S          S 
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGS----------SY 495

Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           R                        A  +F EM    +  N   Y  +I  LCK    ++
Sbjct: 496 R------------------------ALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531

Query: 587 ARELMKVMILHGIIP 601
           A  L++ MI  GI P
Sbjct: 532 AEGLVEKMIDTGIDP 546



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 217/445 (48%), Gaps = 11/445 (2%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EMV  G+V   N FN ++  +       +    ++   K  +  +V  F ++I   C+
Sbjct: 117 FNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWR-FFNESKIKVDLDVYSFGIVIKGCCE 175

Query: 264 VGDLEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            G++E +  L    R+ G        PN V +  +I+G CK G +E A+++ + M K G+
Sbjct: 176 AGEIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGL 229

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY  LI G  + G  ++   + ++M + G+ PN   YN  ++    +G  + A  
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFK 289

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           +  +M ++ +  +  TY+ L  GLCR     +A K+ +Q+  + +  +  +YN LI+  C
Sbjct: 290 LFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFC 349

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
               L  A  L   +  RGL P ++TY  L+ G+CK G+  GA +V + M++   KP+ +
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKI 409

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  +I+   +  +++ A  L    + +GL  D  TY+ LI+G+ I G++ EA  +F  M
Sbjct: 410 TYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLM 469

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
               +  NKV YN ++   CK G   +A  L + M    + P+  +Y  ++    K    
Sbjct: 470 VAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAI 644
           +E   L + M+ +G+ P +   N I
Sbjct: 530 KEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 212/439 (48%), Gaps = 5/439 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           + ++I A  +   L+ ++S +  M+  G  P   CFN ++             + F +  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +     V  +  +   +I G C+ G +E + ++   + + G   NV  Y TLIDG  + G
Sbjct: 157 I----KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E+A  L  EM K GL+ N   Y   IH LF  G  +    +   M +  + P+ +TY+
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            +    C++G  K AFKL +++ E  +  +  +YN LI  LC+      A +++  M   
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSD 332

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P++ITY TLIDG+C  G +  A+ +  ++K     P+LV YN +++G CK      A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 519 KSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +++  +  G+  + ITY  LI+ +     + +A  + S M  +G+  +   Y++LI+ 
Sbjct: 393 GKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHG 452

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C  G   +A  L K+M+   + P+ V Y T+V  + K  S    + L  +M    + P+
Sbjct: 453 FCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512

Query: 638 NQTYNAIISPLLGEKSAED 656
             +Y  +I  L  E+ +++
Sbjct: 513 VASYRYMIEVLCKERKSKE 531



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 2/287 (0%)

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
           +Y   I+       ++ ++   ++M+DK   P    ++ L   +  +    Q ++  N+ 
Sbjct: 96  LYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES 155

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
            +  +  D YS+ I+I   C++  +  +  LL  +   G  P+++ Y TLIDG CK G I
Sbjct: 156 -KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTL 539
           E A  ++  M K     N   Y  +I+GL K+        + +  Q  G+   + TYN +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           +N +  +G+  +AF +F EMR  G++ N V YN LI  LC+     +A ++M  M   GI
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 600 IPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            P+ +TY TL+  F       + + L  D+   G+SP   TYN ++S
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 126/248 (50%), Gaps = 4/248 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C ++ A E A  V+ ++K  G + ++  +N  +     + ++G+   L +++ S G   +
Sbjct: 314 CREMKANE-ANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           + T+N+++   CK+     A  +   M + GI P+ + + ++I+   ++ ++E A++L  
Sbjct: 373 LVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRS 432

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
            M  +    + P+  T++ +I+GFC  G++  A  +   M+   ++ N   Y T++ GY 
Sbjct: 433 PMEELG---LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYC 489

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + GSS  ALRL  EM ++ L PN   Y   I  L  E   + A  ++  MID  I P   
Sbjct: 490 KEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDS 549

Query: 396 TYSILTKG 403
             +++++ 
Sbjct: 550 ILNLISRA 557


>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 918

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 250/503 (49%), Gaps = 4/503 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           V+ +L+ A       E A   ++K+K +G  ++I  ++  +    K+ +       +KE 
Sbjct: 311 VYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEA 370

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                  N  T+  +IYA C+ C ++ A +L   M   GI   +  ++ +++    +G+ 
Sbjct: 371 KEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNE 430

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
           E  L +F ++         P+ +++ C+IN + K+G+V  A +I   M  +GI  N++TY
Sbjct: 431 EKCLIVFDRLKECG---FSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTY 487

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           + LI+G+ +      A  + ++  K GL P+ V+YN+ I       +++ A+ ++  M  
Sbjct: 488 SMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQK 547

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           +   P   T+  +  G  R G +++A ++ + +     +   ++YN LI  L +   +A 
Sbjct: 548 ERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAK 607

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +L  M V G+ P+  TY TL+ GY   G+ E A Q +  ++    + ++  Y +++ 
Sbjct: 608 AVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLK 667

Query: 508 GLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             CK   + +A ++ +  S +    +   YN LI+G+   G + EA  +  +MR  G+  
Sbjct: 668 SCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLP 727

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           +   Y   +N  CK G  Q+A E+++ M   GI P+  TYTTL+  +++   PE+ +   
Sbjct: 728 DIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCF 787

Query: 627 DDMVLSGVSPDNQTYNAIISPLL 649
           ++M L+ + PD   Y+ +++ LL
Sbjct: 788 EEMKLAELKPDKAAYHCLMTSLL 810



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 206/441 (46%), Gaps = 4/441 (0%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            + +++ A  Q    + A  ++++++V+G    I  ++  +     +    +   ++  +
Sbjct: 381 TYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL 440

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
             CG+  +V ++  +I    K  K+ +AL +   M  SGI  N+  ++M+IN   ++ D 
Sbjct: 441 KECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDW 500

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             A  +F      + D + P+ V +N II  FC +  ++ A  +   M K       RT+
Sbjct: 501 ANAFSVFEDF---TKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTF 557

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             +I G+AR G    AL + D M + G +P    YN+ I  L  +  +  A+ +L  M  
Sbjct: 558 LPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNV 617

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
             + P+  TY+ L +G    G  ++AF+  + +  E +  D Y+Y  L+   CKS  + +
Sbjct: 618 AGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQS 677

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  +   M  + +  +   Y  LIDG+ + G++  A  + + M+K    P++  Y S +N
Sbjct: 678 ALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVN 737

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
             CK   +  A  ++Q  +  G+   + TY TLING+       +A + F EM+   +  
Sbjct: 738 ACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKP 797

Query: 567 NKVGYNILINFLCKFGCYQQA 587
           +K  Y+ L+  L     + Q+
Sbjct: 798 DKAAYHCLMTSLLSRATFAQS 818



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 205/447 (45%), Gaps = 8/447 (1%)

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + ++ M + G   + + ++ +I+A      +EEAL    +M + GI   +V +++I+   
Sbjct: 295 QTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGF 354

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLP--NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
            ++G  + A   F++         LP  N+VT+  II   C+   ++ AE +   M   G
Sbjct: 355 AKMGKADAADHWFKE-----AKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQG 409

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           ID  +  Y T++DGY   G+ E+ L + D + + G  P+ + Y   I+     G V  AL
Sbjct: 410 IDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKAL 469

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
            +   M    I  +  TYS+L  G  +      AF +     ++ +  D   YN +I   
Sbjct: 470 QISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAF 529

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           C  +N+  A  ++  M      P   T+  +I G+ + G +  A+++++ M++    P +
Sbjct: 530 CGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTV 589

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
             YN++I GL +   +  A ++L      G+  +  TY TL+ GY   G   +AF  FS 
Sbjct: 590 HTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSV 649

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           +RN G+ ++   Y  L+   CK G  Q A  + K M    I  +   Y  L+  +++   
Sbjct: 650 LRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGD 709

Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAII 645
             E  +L   M   GV PD  TY + +
Sbjct: 710 VWEAADLMQQMRKEGVLPDIHTYTSFV 736



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 153/322 (47%), Gaps = 1/322 (0%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           + Y  ++  YAR G    A +  + M  RG+ P++ VY+S IH      D+E AL  +  
Sbjct: 275 KEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRK 334

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M ++ I     TYSI+  G  + G    A     +  E+    +A +Y  +I   C++ N
Sbjct: 335 MKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCN 394

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  A+ L+  M V+G+   I  Y T++DGY   GN E  + V++ +K+    P+++ Y  
Sbjct: 395 MDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGC 454

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +IN   K   +  A  + +  +  G+   + TY+ LING+      A AF++F +    G
Sbjct: 455 LINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDG 514

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V YN +I   C      +A  ++K M      P   T+  ++  F++       +
Sbjct: 515 LKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRAL 574

Query: 624 ELHDDMVLSGVSPDNQTYNAII 645
           E+ D M  SG  P   TYNA+I
Sbjct: 575 EIFDMMRRSGCIPTVHTYNALI 596



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 1/260 (0%)

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P    Y ++ K   R G +  A +    +    +   ++ Y+ LI+      ++  A   
Sbjct: 272 PARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHC 331

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
           +  M   G+   I+TY  ++ G+ K G  + A   ++  K+     N V Y SII   C+
Sbjct: 332 VRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQ 391

Query: 512 DASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             ++D A++L++  +  G+   I  Y+T+++GY + G   +   +F  ++  G + + + 
Sbjct: 392 TCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVIS 451

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
           Y  LIN   K G   +A ++ K+M + GI  +  TY+ L+  F K         + +D  
Sbjct: 452 YGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT 511

Query: 631 LSGVSPDNQTYNAIISPLLG 650
             G+ PD   YN II+   G
Sbjct: 512 KDGLKPDVVLYNNIITAFCG 531



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 9/258 (3%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C  T   ++AL+    +      A  ++ ++ V G   + H +   +     L +  + +
Sbjct: 585 CIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAF 644

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           + +  + + G   +V T+  ++ + CK  +++ AL++   M    I  N   +N++I+  
Sbjct: 645 QYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGW 704

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + GD+  A  L ++   M  + VLP+  T+   +N  CK G ++ A EI   M   GI 
Sbjct: 705 ARRGDVWEAADLMQQ---MRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIK 761

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL-----FAEGDV- 375
            N++TY TLI+G+AR    E+AL   +EM    L P+   Y+  +  L     FA+  V 
Sbjct: 762 PNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSYVY 821

Query: 376 EGALFVLSDMIDKHICPD 393
            G L V  +MI+  +  D
Sbjct: 822 SGLLSVCREMIESEMTVD 839



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/275 (20%), Positives = 118/275 (42%), Gaps = 3/275 (1%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  + T   F  ++    + G    A ++   ++  G   ++H +N  +  LV+  ++ +
Sbjct: 548 ERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAK 607

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
              +  +M   G   N +T+  ++         E+A   +  +   G+  +V  +  ++ 
Sbjct: 608 AVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLK 667

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
             C+ G ++ AL + ++M   S  ++  N+  +N +I+G+ + G V  A ++   M K G
Sbjct: 668 SCCKSGRMQSALAVTKEM---SAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEG 724

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +  ++ TY + ++   + G  ++A  +  EM   G+ PN   Y + I+        E AL
Sbjct: 725 VLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKAL 784

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
               +M    + PD   Y  L   L       Q++
Sbjct: 785 SCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQSY 819


>gi|147856554|emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 249/527 (47%), Gaps = 44/527 (8%)

Query: 39  ICVNLRQ-RKWKILEQMAPSL--TNSLVNRVVSEFRK--SPKLALEFYTWVGENNRFSHS 93
           +C +LR+   W  L Q   SL  T S V RV+ E +K    K AL F+ W  +     H 
Sbjct: 44  LCDSLRRGLNWDALNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQCKNLEHG 103

Query: 94  LESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV 153
           + S C  +H+LV      DA  L+ + +  N+ S    ++ LL SY I  + P VFD LV
Sbjct: 104 VASYCITIHILVGAHLLMDAQSLLESTLKKNAGSRFLVVDSLLSSYNITGSNPRVFDLLV 163

Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
           ++ +++   E  +DV   L+  G S+S+ ++N  L  + K +     WK+Y+        
Sbjct: 164 QSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYEH------- 216

Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
                                       M++   +PN V  +++I+  C+ G L+   K 
Sbjct: 217 ----------------------------MIRVRKYPNEVSVSVMISALCKEGALQ---KF 245

Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
              +  + G    P  + + C+I    + GRVE    I   +++  +  +  +Y+ +   
Sbjct: 246 VDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYA 305

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
             + G+ + A  + +EM+ RG  PN  VY   I     EG +E A  ++ DM +  + P 
Sbjct: 306 KVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPY 365

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
             T+++L  G  + G +++  +L  ++++  +V   +++N++   LC+S  +  A ++L+
Sbjct: 366 DETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLT 425

Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
            ++ +G +PD ITY  LI  Y K G I+  +++Y  M+     P L+++ SII  LC+  
Sbjct: 426 LLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSPGLLVFESIIRSLCQCR 485

Query: 514 SLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM 559
            L+ A+  L+    R   +    Y TLI+GYF  G    A  + +EM
Sbjct: 486 KLEKAEKYLRIMKDRSIAISTCVYETLISGYFEKGDELRASQLHNEM 532



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 148/327 (45%), Gaps = 1/327 (0%)

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N R +  L+  Y++    E    +C  + + G   + + +N  +H +    +      + 
Sbjct: 155 NPRVFDLLVQSYSKLRMFEICFDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIY 214

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             MI     P+  + S++   LC+ G +++   + +++  +           +I  + + 
Sbjct: 215 EHMIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEE 274

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +     +L  ++ + +I D I+Y  +     K G ++ A +VYE M      PN  +Y
Sbjct: 275 GRVEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVY 334

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLD-AITYNTLINGYFINGKIAEAFAMFSEMRN 561
              I   C +  ++ A  L+Q  +  GL+    T+N LI G    G++ E   +   M  
Sbjct: 335 TLFIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQ 394

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  +   +N++   LC+ G  ++A E++ +++  G +PD +TY+ L+  + K    ++
Sbjct: 395 RGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQ 454

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
           V++L+ +M    +SP    + +II  L
Sbjct: 455 VLKLYYEMEYRSLSPGLLVFESIIRSL 481



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 146/317 (46%), Gaps = 1/317 (0%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           MI+     N  + + +I    + G+ ++ + + D +  +   P  +V    I  +  EG 
Sbjct: 217 MIRVRKYPNEVSVSVMISALCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGR 276

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           VE  + +L  ++ K++  D  +YS++     + G +  A++++ ++L      +A+ Y +
Sbjct: 277 VEQGMLILKRLLQKNMILDTISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTL 336

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
            I   C    +  A +L+  M   GL+P   T+  LI G  K G +E  +++ E M +  
Sbjct: 337 FIGSHCVEGRIEEANELMQDMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRG 396

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
             P+   +N +   LC+   +  A  +L      G + D ITY+ LI  Y   G+I +  
Sbjct: 397 LVPSCWAFNLMAGKLCESGVVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVL 456

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
            ++ EM    ++   + +  +I  LC+    ++A + +++M    I      Y TL++ +
Sbjct: 457 KLYYEMEYRSLSPGLLVFESIIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISGY 516

Query: 614 SKNCSPEEVIELHDDMV 630
            +        +LH++M+
Sbjct: 517 FEKGDELRASQLHNEML 533



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 3/230 (1%)

Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
           VK   +   W++Y+EM++ G+  N   + L I + C E ++EEA  L   M  +G+ P  
Sbjct: 307 VKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYD 366

Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
             FN++I    + G LE  L+L  +M       ++P+    N +    C+ G V+ A+E+
Sbjct: 367 ETFNLLIAGCSKAGRLEEGLRLCERM---MQRGLVPSCWAFNLMAGKLCESGVVKRADEM 423

Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
              ++  G   +  TY+ LI  Y + G  ++ L+L  EM  R L P  +V+ S I  L  
Sbjct: 424 LTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSPGLLVFESIIRSLCQ 483

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
              +E A   L  M D+ I      Y  L  G    G   +A +LHN++L
Sbjct: 484 CRKLEKAEKYLRIMKDRSIAISTCVYETLISGYFEKGDELRASQLHNEML 533


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 208/438 (47%), Gaps = 4/438 (0%)

Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
           Y     ++N ++  L K  + +     Y  ML +G  PN   +  ++   CQ    E A 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
            +FR M   +     PN  +++ +I G C+  +V+ A E+   MI  G   NV TY +L+
Sbjct: 73  SVFRGM---AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
            G  + G  +EA+ L   MV RG  P+ VVYN  I     +GD+  A  +  +M++K   
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
           P  FTY+ L  G  R G   +   L   +L +  V + +++N L++  CK  ++  A +L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
              M   G  PD+++Y TL+ G C  G    A ++   M +    P++V YN +I+G  K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
             +LD A  L     + GL  DA +Y+T+I+     GK+  AF +F +M   G A +   
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
              L+  LC+     ++ EL + M+    +P    Y  L+ +  K    ++V E+  ++ 
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429

Query: 631 LSGVSPDNQTYNAIISPL 648
             G SPD +    I+  L
Sbjct: 430 ERGFSPDVEISKVILETL 447



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 189/378 (50%), Gaps = 1/378 (0%)

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
           M G   +PN+ T+  ++   C+  R E A  +   M   G   NV +Y+ LI G  RG  
Sbjct: 43  MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +EA  L +EM+  G  PN V Y S +  L   G ++ A+ + S M+ +   PD   Y++
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           L  G  + G + +A++L  ++LE+  +   ++YN L++   +       + L   M+ +G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
            +P+I T+  L+DG+CK G++  A +++  M+ +   P++V YN+++ G+C       A+
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
            LL+   R G+  D ++YN LI+GY  +G +  A  +F E+   G+  +   Y+ +I+ L
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342

Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
           C+ G    A  + K MI +G  PD      LV    +     E  EL   MV     P  
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLI 402

Query: 639 QTYNAIISPLLGEKSAED 656
             YN ++  L   K ++D
Sbjct: 403 PEYNLLMYKLCKAKRSDD 420



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 212/439 (48%), Gaps = 20/439 (4%)

Query: 78  LEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLD 137
           + F+ W G    ++H   S   ++ +L    R D       +++ A              
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAG------------- 47

Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEI 197
               C      +  L+R+  Q    E A  V + +  +G S ++ +++  ++ L +  ++
Sbjct: 48  ----CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKV 103

Query: 198 GRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
               +L  EM+  G+  NV T+  ++  LCK  KL+EA+ L+ RM+  G  P+ V +N++
Sbjct: 104 DEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVL 163

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+   + GD+  A +LF +M        +P   T+N +++GF + G     + +   M++
Sbjct: 164 IDGFSKKGDMGEAYRLFEEM---LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G   N+ T+  L+DG+ + G   EA RL  EM   G  P+ V YN+ +  + ++G    
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +L +MI   + PD  +Y+IL  G  ++G +  A KL  ++ +  +  DA+SY+ +I+
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
            LC++  + AA  +   MI  G  PD      L+ G C+G  +  + ++++ M K E  P
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400

Query: 498 NLVIYNSIINGLCKDASLD 516
            +  YN ++  LCK    D
Sbjct: 401 LIPEYNLLMYKLCKAKRSD 419



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 174/363 (47%), Gaps = 5/363 (1%)

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
            ++++N ++    K GR +        M+ AG   N  TY  L+    +    EEA  + 
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
             M  +G  PN   Y+  I  L     V+ A  +L++MID    P+  TY  L  GLC+ 
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G +K+A  L ++++      D   YN+LI+   K  ++  A +L   M+ +G IP + TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            +L+ G+ + G       ++++M +    PN+  +N++++G CK   +  A  L    + 
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255

Query: 528 IGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
           +G   D ++YNTL+ G    GK  EA  +  EM   G+  + V YNILI+   K G    
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A +L   +   G+ PD  +Y+T++    +         +  DM+ +G +PD     A++ 
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD----AAVVI 371

Query: 647 PLL 649
           PL+
Sbjct: 372 PLV 374


>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
 gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           virgata]
          Length = 418

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 216/415 (52%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ F H+L+S C ++HLL   +   +A  L+  ++S     S       +L++    ++ 
Sbjct: 6   NSTFRHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A +  +  +     V        L HL+KL      W  Y+
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN++++  CKE  +  A  ++  + K G+ P+VV FN ++N   ++G
Sbjct: 126 EILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M    V P+  T++ +ING CK  +++ A  +   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLI G+ +    + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M
Sbjct: 243 TFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
             K + PD  TY+ L  G C+ G ++ AF+   ++++E++  D  +Y  LI+ LC+    
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRY 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V
Sbjct: 363 LDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 417



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V ++ TL++GY R G  +E  RL   M  
Sbjct: 140 NILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+DK + P+  T++ L  G C+N  V  
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M ++GL PD ITY TLID
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A +  + M +   + + V Y ++I+GLC++     A+ +L+    +GL  
Sbjct: 320 GCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +   G +     +  EM+  G
Sbjct: 380 DTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 142/270 (52%), Gaps = 1/270 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E++  G   +   +N  +H    EGD+  A  V + +    + P   +++ L  G  R 
Sbjct: 125 EEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRL 184

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F+L + +    +  D Y+Y++LIN LCK + +  A  L   M+ +GL+P+ +T+
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTF 244

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLI G+CK   ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 245 TTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLI+G    G +  AF     M    I ++ V Y  LI+ LC+ G Y  
Sbjct: 305 KGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLD 364

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
           A ++++ M+  G+ PD  TYT ++  F K 
Sbjct: 365 AEKVLREMLSVGLKPDTGTYTMIINEFCKK 394



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 156/303 (51%), Gaps = 11/303 (3%)

Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTI 366
           F EEI    +  G   ++  +  L+  + + G    A  + + + K GL P+ V +N+ +
Sbjct: 123 FYEEI----LDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLM 178

Query: 367 HWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
           +     GD++    + S M    + PD +TYS+L  GLC+   +  A  L +++L++ +V
Sbjct: 179 NGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLV 238

Query: 427 GDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
            +  ++  LI   CK+  +  A ++   M+ + L PD+ITY TLI G CK G+++ A  +
Sbjct: 239 PNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDL 298

Query: 487 YENMKKVEKKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLING 542
            + M     KP+ + Y ++I+G CK+  L+ A    K ++Q + R   LD + Y  LI+G
Sbjct: 299 IDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIR---LDDVAYTALISG 355

Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
               G+  +A  +  EM +VG+  +   Y ++IN  CK G      +L+K M   G +P 
Sbjct: 356 LCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 415

Query: 603 YVT 605
            V+
Sbjct: 416 VVS 418



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 131/242 (54%), Gaps = 1/242 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++L+       Y +NIL++  CK  ++  A+ + +++   GL P ++++ TL
Sbjct: 118 KLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++   ++   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 178 MNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI G+  N ++  A  ++ +M +  ++ + + YN LI  LCK G  +QA +
Sbjct: 238 VPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    E   E    M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLC 357

Query: 650 GE 651
            E
Sbjct: 358 QE 359



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 1/190 (0%)

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
           +  L+  +CK G+I  A  V+  + K   +P++V +N+++NG  +   LD    L  A  
Sbjct: 139 FNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
             G+  D  TY+ LING     K+ +A  +F EM + G+  N V +  LI   CK     
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVD 258

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A E+ K M+   + PD +TY TL+    K    ++  +L D+M + G+ PD  TY  +I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318

Query: 646 SPLLGEKSAE 655
                E   E
Sbjct: 319 DGCCKEGDLE 328



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 52/244 (21%)

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLID 472
           SY  +I+ LC    L+ AK L+  ++ R                      DI  +  LI 
Sbjct: 15  SYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 74

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
            Y + G +  A++ Y    ++ ++    +              D  + +L+       L 
Sbjct: 75  AYLESGFLRDAIECY----RLTREHKFWV------------PFDTCRKVLEH------LM 112

Query: 533 AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
            + Y  L+ G++             E+ + G   +   +NIL++  CK G  + A+ +  
Sbjct: 113 KLKYFKLVWGFY------------EEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFN 160

Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
            +   G+ P  V++ TL+  + +    +E   L   M  SGV PD  TY+ +I+ L  E 
Sbjct: 161 AITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKES 220

Query: 653 SAED 656
             +D
Sbjct: 221 KMDD 224


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 226/484 (46%), Gaps = 7/484 (1%)

Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
           +R   +      A  +++++K  G S  + +    +    K     R       M+  G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
             N   +N +I  LCK   L EA S Y + +     PNVV +N+II+  C+  ++E AL 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAES-YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
             R+M  +      P    ++ I+  FCK G V  A ++   M   G + ++  +  L+ 
Sbjct: 120 FLREMEELGHP---PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLS 176

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G  R     EA  L   M  RG  P+ V YN+ I  L     ++ A+F+L  M  + + P
Sbjct: 177 GLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM--VGDAYSYNILINYLCKSNNLAAAKQ 450
              TY+ L   LC+   ++QA+++  ++ E        AYS  ILIN LCK+     AK+
Sbjct: 237 TFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKE 296

Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
           +   M  RG+ P ++TY TL++G      ++ A+++   M      PN+  Y  +I+ LC
Sbjct: 297 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLC 356

Query: 511 KDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
           K   ++ A  LL A +  G + ++  +  L++     G++ +AF ++ EM  +       
Sbjct: 357 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 416

Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
             NIL++ + + G   +A++ +K M   GI+PD  TY  LV         ++  +L +++
Sbjct: 417 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476

Query: 630 VLSG 633
           V  G
Sbjct: 477 VRDG 480



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 175/352 (49%), Gaps = 4/352 (1%)

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           AE I   M  AG   +V+++  LI G+ + GS +      D M++ GL PN ++YN+ I 
Sbjct: 13  AEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLIS 72

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L   G +  A   L  M  +H  P+  +Y+I+  G C+   +++A     ++ E     
Sbjct: 73  CLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPP 131

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
             ++Y+ ++   CK+ N++ A  + + M  +G  PDI+ +  L+ G  +   I  A +++
Sbjct: 132 TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELF 191

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFIN 546
            +M     KP++V YN++I GLCK   LD A  LL+  ++  +    +TY TLI+     
Sbjct: 192 RSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKF 251

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYN--ILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
            ++ +A+ +F +M        +  Y+  ILIN LCK     +A+E+ + M   GI P  V
Sbjct: 252 ARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVV 311

Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           TY TL+         ++ +EL   M+    +P+  TY  +IS L      E+
Sbjct: 312 TYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEE 363



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 168/349 (48%), Gaps = 7/349 (2%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           TP  + ++V++  + G    A DV  ++  KG    I  +N  LS L +  +I    +L+
Sbjct: 132 TPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELF 191

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           + M S G   +V T+N +I  LCK  KL+EA+ L  RM +  + P  V +  +I+  C+ 
Sbjct: 192 RSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKF 251

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
             L+ A ++F KM         P + +   +ING CK  R   A+E+   M   GI   V
Sbjct: 252 ARLQQAYEVFEKMAEGPCPCTEP-AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY TL++G       ++A+ L   M+ +   PN   Y   I  L     VE A  +LS 
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 370

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE---EHMVGDAYSYNILINYLCK 441
           M DK   P    + +L   L R G +  AF+L+ ++     + +VG   S NIL++ + +
Sbjct: 371 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG---SSNILLDGILR 427

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
             ++  AK  L  M   G++PD  TY  L+ G C  G  + A ++ E +
Sbjct: 428 RGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 212/509 (41%), Gaps = 83/509 (16%)

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +  LV+ + + +   + +EM   G+  +V +  L+I    K    +   S   RML++G+
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
           +PN                                      ++ +N +I+  CK G +  
Sbjct: 61  FPN--------------------------------------AILYNNLISCLCKAGMLAE 82

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           AE     M +     NV +Y  +IDGY +  + E+AL    EM + G  P    Y+S + 
Sbjct: 83  AESYLKRMPQHCAP-NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQ 141

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
                G+V  A+ V ++M  K   PD   +++L  GL R   + +A +L   +       
Sbjct: 142 SFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKP 201

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           D  +YN +I  LCK   L  A  LL  M    + P  +TY TLID  CK   ++ A +V+
Sbjct: 202 DVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVF 261

Query: 488 ENMKK-----VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLIN 541
           E M +      E   +++I   +INGLCK      AK + Q  +  G+   + TYNTL+ 
Sbjct: 262 EKMAEGPCPCTEPAYSVLI---LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLE 318

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
           G     K+ +A  +   M +   A N   Y ILI+ LCK    ++A +L+  M   G +P
Sbjct: 319 GLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVP 378

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDM-------------------------------- 629
               +  L++R ++    ++  EL+ +M                                
Sbjct: 379 SLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFL 438

Query: 630 ---VLSGVSPDNQTYNAIISPLLGEKSAE 655
                +G+ PD  TY+ ++  L  +  A+
Sbjct: 439 KQMTDTGIVPDKFTYDKLVVGLCWQGKAD 467



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 106/223 (47%)

Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
           I  L +++ +A A+ ++  M   G  PD+ ++  LI G+ K G+ +      + M +   
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAM 555
            PN ++YN++I+ LCK   L  A+S L+   +    + ++YN +I+GY     I +A A 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAF 120

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
             EM  +G       Y+ ++   CK G   +A ++   M   G  PD V +  L++   +
Sbjct: 121 LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 180

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
                E  EL   M   G  PD  TYN +I+ L   K  ++ V
Sbjct: 181 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAV 223


>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 234/487 (48%), Gaps = 49/487 (10%)

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E + C  VE+     L  YA            ++ ++ + G+ P+   +N +I  + + G
Sbjct: 145 EELLCALVESWGRLGLAHYAH----------EVFVQVPRLGLRPSTAIYNAVIAASVRAG 194

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
            ++ A   F++M     D   P+  T+N +++G C+ G V+ A  +   M +AGI  NV 
Sbjct: 195 AVDAAYLRFQQM---PADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVV 251

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           TY  L+DG+      EEA+ + + M ++G+      Y S +H  F   + E A  +LS+ 
Sbjct: 252 TYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEW 311

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI--------- 436
           I+         Y  L   L +N   K+A +L  ++ +   +  + +++I+I         
Sbjct: 312 IESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLES 371

Query: 437 --------NYLCKSNNL------------------AAAKQLLSSMIVRGLIPDIITYGTL 470
                   +++ K  NL                  + A +  S M+  GL+  + +Y  +
Sbjct: 372 SDLCELVDDFIKKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIV 431

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ID + K G +E A++  + M++    PNLV +N++ING  K  ++  AK+ L+     GL
Sbjct: 432 IDCFAKAGEVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGL 491

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + D IT+ +LI+G     ++ +AF  FSEM   G+  N   YN+LI+ LC  G   +A E
Sbjct: 492 MPDVITFTSLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIE 551

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + GI PD  ++   +  F +    E+  +L +DM   GVSPD+ TYNA+I  L 
Sbjct: 552 LLNKMKMDGITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALC 611

Query: 650 GEKSAED 656
            E+  ++
Sbjct: 612 DERRVDE 618



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 190/400 (47%), Gaps = 14/400 (3%)

Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
           E A  V++++K KG S +   + + +    +  E  R +++  E +      +   ++ +
Sbjct: 267 EEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTL 326

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV---GDL-EFALKLFRKMG 278
           +Y L K    +EA+ L  +M K G       F+++I  A +V    DL E      +K G
Sbjct: 327 LYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGG 386

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
            +  D  +        II  F +   +  A +    M+  G+  +V +Y  +ID +A+ G
Sbjct: 387 NLGFDMYI-------MIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAG 439

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E AL     M + G  PN V +N+ I+     G+V  A   L  +++  + PD  T++
Sbjct: 440 EVERALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFT 499

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            L  GLC    +  AF   +++ E  +  +  +YN+LI+ LC + +++ A +LL+ M + 
Sbjct: 500 SLIDGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMD 559

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ PD  ++   I  +C+   IE A +++ +M +    P+   YN++I  LC +  +D A
Sbjct: 560 GITPDAYSFNAPILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEA 619

Query: 519 KSLLQASQRIGLLDAI--TYNTLINGYFINGKIAEAFAMF 556
           K ++ A + I  +     TY  ++      G+ +EA  MF
Sbjct: 620 KEIILAMESISCIGTKQHTYWPVVGALTKMGRFSEA-GMF 658


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 228/513 (44%), Gaps = 6/513 (1%)

Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
           A  +  V+    +G  E A +V  +LK  G  +SI A N+ LS  +K  +    ++ Y+E
Sbjct: 157 ASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQE 216

Query: 207 MVSCGYVENVNTFNL--VIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
           M+  G   + NT  +  +I A C   ++     L  + LK+G+ P    +N +I   CQ 
Sbjct: 217 MIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQA 276

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
            +      +   +  M   + LP   T+  IING CK      A  +   +   G   + 
Sbjct: 277 KNY---ASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDR 333

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
             Y T+I G    GS  EA +L  EM+ +G+ PN   YN+ +H     GD E A  + ++
Sbjct: 334 VMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNE 393

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M +K       T + +   LC  G   +AF++  ++ E  +  DA +YN LI   CK   
Sbjct: 394 MCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGK 453

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +     LL+ ++ +   P +  Y  LI   CK G+ E A ++  +M      PN   Y++
Sbjct: 454 VDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDT 513

Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +++G  K    +  + L   +   G      T N +I+     GK  EA  MF +M   G
Sbjct: 514 MLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETG 573

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           I  + + YN LI   CK G   ++  L+  ++  G+ P   +Y +L+ +  +N   E   
Sbjct: 574 IKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAK 633

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            L  DMV  G+ P       +IS L  +  A +
Sbjct: 634 RLWGDMVSKGIEPHANLREHLISGLCKQGRATE 666



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 233/493 (47%), Gaps = 39/493 (7%)

Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
           R  K+ +++   G++ +  +    +  LC    +EEA+ +Y+++ ++GI  ++V  N I+
Sbjct: 141 RAAKMVRDIA--GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSIL 198

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
           +   + G  E   + +++M + +G +   N+ T  C+I  FC  G+V    E+    +K 
Sbjct: 199 SGCLKAGKTELLFEFYQEM-IKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKT 257

Query: 319 GID-------------CNVRTYATL----------------------IDGYARGGSSEEA 343
           G+D             C  + YA++                      I+G  +     EA
Sbjct: 258 GLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEA 317

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
            R+ +++  RG  P+ V+Y + IH L   G    A  +  +M+DK + P+ +TY+ +  G
Sbjct: 318 YRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHG 377

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
             ++G  ++A +L+N++  +       + N +I+ LC       A ++   M   G+  D
Sbjct: 378 SLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQAD 437

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
            ITY +LI G+CK G ++  + +   +   + +P++ +Y  +I   CKD   +AAK LL 
Sbjct: 438 AITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLG 497

Query: 524 ASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
                GL  +A TY+T+++G   +G       +++E  N G        N +I+ LC  G
Sbjct: 498 DMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRG 557

Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
              +A E+ K M   GI  D +TY +L+  F K     + + L +++V  G+ P   +Y 
Sbjct: 558 KSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYA 617

Query: 643 AIISPLLGEKSAE 655
           ++I  L     AE
Sbjct: 618 SLIIQLCQNGDAE 630



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 166/398 (41%), Gaps = 38/398 (9%)

Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
           AY V   LK +G++     +   +  L ++   G   KL+ EM+  G   N  T+N +++
Sbjct: 317 AYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLH 376

Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
              K    E A  LY  M   G     V  N II+E C  G  + A ++F+KM   S   
Sbjct: 377 GSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM---SETG 433

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           +  +++T+N +I GFCK G+V+    +   ++      +V  Y  LI    + G  E A 
Sbjct: 434 IQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAK 493

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG--------------------------- 377
           RL  +M  +GL PN   Y++ +H     GD E                            
Sbjct: 494 RLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISEL 553

Query: 378 --------ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
                   A  +   M +  I  D  TY+ L +G C+ G V ++  L N+++ + +   A
Sbjct: 554 CSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSA 613

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
            SY  LI  LC++ +  +AK+L   M+ +G+ P       LI G CK G     +     
Sbjct: 614 SSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMG 673

Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
           M + + KP    +  +   L +  S  +       SQR
Sbjct: 674 MLENKIKPKKAAFEDLAECLIQSESSGSVGPSPSRSQR 711



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 3/308 (0%)

Query: 354 GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQA 413
           G +P++      +  L   G +E A+ V   + +  I       + +  G  + G  +  
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210

Query: 414 FKLHNQVLEEHMVGDAYSYNI--LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           F+ + ++++     DA +  +  LI   C S  +A   +LL+  +  GL P   TY  LI
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS-LDAAKSLLQASQRIGL 530
            G+C+  N     +V   M      P +  Y  IINGLCK+   L+A +       R   
Sbjct: 271 AGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            D + Y T+I+G    G   EA  ++ EM + G+  N   YN +++   K G +++A EL
Sbjct: 331 PDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACEL 390

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
              M   G     VT   +++        +E  E+   M  +G+  D  TYN++I     
Sbjct: 391 YNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCK 450

Query: 651 EKSAEDQV 658
           E   ++++
Sbjct: 451 EGKVDERM 458



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/121 (21%), Positives = 55/121 (45%)

Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
           T A  + ++      G ++ A ++ +K+   G       +N+ +    K  ++G+   L 
Sbjct: 542 TTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLL 601

Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
            E+V+ G   + +++  +I  LC+    E A  L+  M+  GI P+      +I+  C+ 
Sbjct: 602 NELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQ 661

Query: 265 G 265
           G
Sbjct: 662 G 662


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 228/440 (51%), Gaps = 17/440 (3%)

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G + +V T + ++Y  C+  KL EA  L+  M + G+ PN V +  IIN   + G 
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +  A  L  +M V+ G S   + VT   +++G  K+G+ + AEE+   ++K  +  N  T
Sbjct: 61  VMEAFNLQSQM-VVRGISF--DIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVT 117

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y+ L+DGY + G  E A  +  +M K  + PN + ++S I+    +G +  A+ VL +M+
Sbjct: 118 YSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMV 177

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
            +++ P+   Y+IL  G  + G    A     ++    +      ++IL+N L +   + 
Sbjct: 178 QRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMD 237

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A+ L+  M  +G+ PDI+ Y +LIDGY K GN   A+ + + MK+   + ++V YN++I
Sbjct: 238 EARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALI 297

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
            GL +    D        S+ I L           G   + K  +A  + +EM++ GI  
Sbjct: 298 KGLLRLGKYDPR---YVCSRMIEL-----------GLAPDCKTEDALDILNEMKSYGIMP 343

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           N V YNILI  LCK G  ++A   +  M++   +P  +T+  LV  +S++   ++++++H
Sbjct: 344 NAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIH 403

Query: 627 DDMVLSGVSPDNQTYNAIIS 646
           + +V SG+      YN +I+
Sbjct: 404 EKLVASGLELSLTVYNTLIT 423



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 254/523 (48%), Gaps = 28/523 (5%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           +  ++ +  + G    A+++  ++ V+G S  I      +  L K+ +     ++++ ++
Sbjct: 48  YATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETIL 107

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
                 N  T++ ++   CK  K+E A  +  +M K  + PNV+ F+ IIN   + G L 
Sbjct: 108 KLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLS 167

Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
            A+ + R+   M   +V+PN++ +  +I+G+ K G  + A++    M    ++ +   + 
Sbjct: 168 KAVDVLRE---MVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFD 224

Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
            L++   R G  +EA  L  +M  +G+ P+ V Y S I   F EG+   AL ++ +M +K
Sbjct: 225 ILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEK 284

Query: 389 HICPDHFTYSILTKGLCRNG-------C-------------VKQAFKLHNQVLEEHMVGD 428
           +I  D   Y+ L KGL R G       C              + A  + N++    ++ +
Sbjct: 285 NIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPN 344

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
           A +YNILI  LCK+  +  A+  L  M+V   +P  IT+  L+  Y +    +  +Q++E
Sbjct: 345 AVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHE 404

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFING 547
            +     + +L +YN++I   C+      AK +L    + G+  D +TYN LI GY    
Sbjct: 405 KLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGS 464

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC----YQQARELMKVMILHGIIPDY 603
            + +A   +S+M   GIA N   YN L+  L   G      ++  +L+  M   G++P+ 
Sbjct: 465 HVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNA 524

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
            TY  LV+ + +  + ++ I LH +M+  G  P  +TYN +IS
Sbjct: 525 ATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLIS 567



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 156/301 (51%), Gaps = 1/301 (0%)

Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
           M+  G+MP+ V  +S ++     G +  A  +  +M +  + P+H +Y+ +   L ++G 
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           V +AF L +Q++   +  D  +   +++ L K      A+++  +++   L P+ +TY  
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRI 528
           L+DGYCK G +E A  V + M+K    PN++ ++SIING  K   L  A  +L +  QR 
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
            + + I Y  LI+GYF  G+   A     EM++  +  + V ++IL+N L + G   +AR
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
            L+  M   GI PD V Y +L+  + K  +    + +  +M    +  D   YNA+I  L
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 649 L 649
           L
Sbjct: 301 L 301



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 172/366 (46%), Gaps = 26/366 (7%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY--KE 206
           + +L+    + G    A  ++Q++K K     + A+N  +  L++L   G++   Y    
Sbjct: 258 YASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRL---GKYDPRYVCSR 314

Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
           M+  G              L  +CK E+AL +   M   GI PN V +N++I   C+ G 
Sbjct: 315 MIELG--------------LAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 360

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           +E A     +M VM     +P  +TH  ++  + +  + +   +I   ++ +G++ ++  
Sbjct: 361 VEKAESALDEMLVME---FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTV 417

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TLI  + R G + +A  + DEMVKRG+  + V YN+ I        VE AL   S M 
Sbjct: 418 YNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMF 477

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAF----KLHNQVLEEHMVGDAYSYNILINYLCKS 442
              I P+  TY+ L  GL   G +++      KL +++ E  +V +A +Y+IL++   + 
Sbjct: 478 VDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRV 537

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
            N      L   MI +G +P + TY  LI  Y K G +  A ++  ++    + PN   Y
Sbjct: 538 GNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTY 597

Query: 503 NSIING 508
           + +  G
Sbjct: 598 DILTCG 603


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 214/469 (45%), Gaps = 5/469 (1%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CK     FD LV    ++     A  V Q++   G    ++  N  +    +L  + +  
Sbjct: 157 CKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQAR 216

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
           +L   M +     +  T+ +++ A C+  ++ E  S        G   + V +N II   
Sbjct: 217 RLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGF 276

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G L  A +LF     M+ +SV P+  T+N +I   CK  ++E A  +     + G+ 
Sbjct: 277 IRCGRLAEATQLFES--TMTKESV-PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVV 332

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            +V TY+ L+D + + G + +AL +   M K G MP+ VVYN  I  L  +G V+ AL +
Sbjct: 333 LDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALEL 392

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L DM  K I PD  TY+I+   L   G  ++A+     +       D  +YN L+N L K
Sbjct: 393 LEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKK 452

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A  L   M     +PD+ T+GTLID   K G +E A++    + K+   PN  I
Sbjct: 453 LRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYI 512

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN++I+G C+   +D    L Q         D+ITY  L+ G+   G  + A  +  EM 
Sbjct: 513 YNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 572

Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             G       YN+LI  L   G  + A  L K MI  G  PD  TY+ L
Sbjct: 573 REGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 239/529 (45%), Gaps = 10/529 (1%)

Query: 134 GLLDSYE---ICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGH-SVSIHAWNNFLS 189
           G+LD       C+     F A +    ++   E A  +   ++     +  + A+N  ++
Sbjct: 74  GMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIA 133

Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
              K  +  R   +++ +   G  + N  +F+ ++  LCK  +  +AL+++  ML +G+ 
Sbjct: 134 GYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLK 193

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
            +V   N +I+  C++G L  A +L   M   +  +   ++ T+  ++N  C+ G++   
Sbjct: 194 ADVNVCNTLIHCTCRLGMLRQARRLLHHM---TAHACARDAFTYGILVNAHCRAGQMHEV 250

Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
                     G   +   Y  +I G+ R G   EA +L +  + +  +P+   YN  I  
Sbjct: 251 ASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-A 309

Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
           L     +E AL +  +     +  D FTYS L     + G   +A ++   + +   + D
Sbjct: 310 LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPD 369

Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
              YN+LI+ L K   +  A +LL  M  +G++PD  TY  +ID     G  E A   + 
Sbjct: 370 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 429

Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
            MK+ +  P++V YN+++NGL K    D A  L    Q    + D  T+ TLI+     G
Sbjct: 430 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAG 489

Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
           ++ +A    + +  +G A N   YN LI+  C+ G   +  EL + MI     PD +TYT
Sbjct: 490 RMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 549

Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
            LV  FS+       +EL  +MV  G +P   TYN +I  L      ED
Sbjct: 550 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVED 598



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 212/449 (47%), Gaps = 8/449 (1%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           YK ++  G   + +T   ++  +CK  + E    L   + + G+  + V     I    +
Sbjct: 6   YKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGR 65

Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC- 322
            GDL+ A+ +   M    G+   P++V     ++  C++ RVE A  + +  ++   DC 
Sbjct: 66  AGDLDAAMGMLDDM--RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTL-FDDMRETCDCA 122

Query: 323 -NVRTYATLIDGYARGGSSEEALRLCDEMVKRG-LMPNNVVYNSTIHWLFAEGDVEGALF 380
            +V  Y TLI GY + G  + AL +   + + G   PN V +++ + +L        AL 
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V  +M+   +  D    + L    CR G ++QA +L + +       DA++Y IL+N  C
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           ++  +      +      G     + Y  +I G+ + G +  A Q++E+    E  P++ 
Sbjct: 243 RAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVF 302

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEM 559
            YN +I  LCK   L+ A +L Q +++ G +LD  TY+ L++ +   G+ A+A  +F  M
Sbjct: 303 TYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNM 361

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
           +  G   + V YN+LI+ L K G   +A EL++ M   GI+PD  TY  ++   S     
Sbjct: 362 QKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRY 421

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           E+       M     SPD  TYN +++ L
Sbjct: 422 EKAYSFFGMMKRRKHSPDVVTYNTLLNGL 450



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 49/281 (17%)

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A   +  +L+  +  DA++   ++  +CK        +LL+ +  +G+    +T    I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 473 GYCKGGNIEGAVQVYENM-----------------------KKVEK-------------- 495
            + + G+++ A+ + ++M                       ++VE+              
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 496 KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAF 553
            P++V YN++I G CK    D A  + +  ++ G    +A++++TL+       +  +A 
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
           A+F EM   G+  +    N LI+  C+ G  +QAR L+  M  H    D  TY  LV   
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 614 SKNCSPEEV---IEL--HDDMVLSGVSPDNQTYNAIISPLL 649
            +     EV   +EL  HD   LS V+     YN II   +
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVN-----YNFIIQGFI 277


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 225/498 (45%), Gaps = 67/498 (13%)

Query: 136 LDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
           L   E  K    +++ ++ A  Q  + + +     ++  KG     + +NN L+ +V  +
Sbjct: 84  LTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSS 143

Query: 196 EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFN 255
              ++W  + E      V +V +F +VI   C+  ++E++  L   + + G  PNVV + 
Sbjct: 144 SFNQWWCFFNE-SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYT 202

Query: 256 MIINEACQVGDLEFALKLFRKMGV--------------------------------MSGD 283
            +I+  C+ G++E A  LF +MG                                 M   
Sbjct: 203 TLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH 262

Query: 284 SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEA 343
            V PN  T+NC++N  CK GR + A ++   M + G+ CN+ TY TLI G  R   + EA
Sbjct: 263 GVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322

Query: 344 LRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKG 403
             + D+M   G+ PN + YN+ I        +  AL +  D+  + + P   TY+IL  G
Sbjct: 323 NEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382

Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
            C+ G    A K+  ++ E  +     +Y ILI+   +S+N+  A QL SSM   GL PD
Sbjct: 383 FCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPD 442

Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
           + TY  LI G+C  G +  A +++++M + + +PN VIYN+++ G CK+ S         
Sbjct: 443 VHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGS--------- 493

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
            S R                        A  +F EM    +  N   Y  +I  LCK   
Sbjct: 494 -SYR------------------------ALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 584 YQQARELMKVMILHGIIP 601
            ++A  L++ MI  GI P
Sbjct: 529 SKEAEGLVEKMIDSGIGP 546



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 218/445 (48%), Gaps = 11/445 (2%)

Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
           + EMV  G+V   N FN ++  +       +    ++   K  +  +V  F ++I   C+
Sbjct: 117 FNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC-FFNESKIKVVLDVYSFGIVIKGCCE 175

Query: 264 VGDLEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
            G++E +  L    R+ G        PN V +  +I+G CK G +E A+++ + M K G+
Sbjct: 176 AGEIEKSFDLLVELREFGFS------PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
             N  TY  LI G  + G  ++   + ++M + G+ PN   YN  ++ L  +G  + A  
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFK 289

Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
           V  +M ++ +  +  TY+ L  GLCR     +A ++ +Q+  + +  +  +YN LI+  C
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFC 349

Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
               L  A  L   +  RGL P ++TY  L+ G+CK G+  GA +V + M++   KP+ V
Sbjct: 350 GVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKV 409

Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
            Y  +I+   +  +++ A  L  + + +GL  D  TY+ LI+G+ I G++ EA  +F  M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSM 469

Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
                  N+V YN ++   CK G   +A  L + M    + P+  +Y  ++    K    
Sbjct: 470 VEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529

Query: 620 EEVIELHDDMVLSGVSPDNQTYNAI 644
           +E   L + M+ SG+ P +   N I
Sbjct: 530 KEAEGLVEKMIDSGIGPSDSILNLI 554



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 209/439 (47%), Gaps = 5/439 (1%)

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           + ++I A  +   L+ ++  +  M+  G  P   CFN ++               F +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           +     V+ +  +   +I G C+ G +E + ++   + + G   NV  Y TLIDG  + G
Sbjct: 157 I----KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
             E+A  L  EM K GL+ N   Y   IH LF  G  +    +   M +  + P+  TY+
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYN 272

Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
            +   LC++G  K AFK+ +++ E  +  +  +YN LI  LC+      A +++  M   
Sbjct: 273 CVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSD 332

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           G+ P++ITY TLIDG+C    +  A+ +  ++K     P+LV YN +++G CK      A
Sbjct: 333 GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 519 KSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             +++  +  G+  + +TY  LI+ +  +  + +A  + S M  +G+  +   Y++LI+ 
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHG 452

Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            C  G   +A  L K M+     P+ V Y T+V  + K  S    + L  +M    + P+
Sbjct: 453 FCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512

Query: 638 NQTYNAIISPLLGEKSAED 656
             +Y  +I  L  E+ +++
Sbjct: 513 VASYRYMIEVLCKERKSKE 531



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 171/357 (47%), Gaps = 37/357 (10%)

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
           R Y  +I+ Y +  S + ++   +EMV +G +P +  +N+ + ++             ++
Sbjct: 95  RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE 154

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
              K +  D +++ I+ KG C  G ++++F L  ++ E     +   Y  LI+  CK   
Sbjct: 155 SKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE 213

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           +  AK L   M   GL+ +  TY  LI G  K G  +   ++YE M++    PNL  YN 
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNC 273

Query: 505 IINGLCKDA-SLDAAKSLLQASQRIGLLDAITYNTLINGY-------------------- 543
           ++N LCKD  + DA K   +  +R    + +TYNTLI G                     
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDG 333

Query: 544 ----------FING-----KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
                      I+G     K+ +A ++  ++++ G++ + V YNIL++  CK G    A 
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAG 393

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
           +++K M   GI P  VTYT L+  F+++ + E+ I+L   M   G++PD  TY+ +I
Sbjct: 394 KVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 156/302 (51%), Gaps = 3/302 (0%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G T+ A+ V  +++ +G S +I  +N  +  L +  +     ++  +M S G   N+ T+
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N +I   C   KL +ALSL   +   G+ P++V +N++++  C+ GD   A K+ ++M  
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM-- 399

Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
                + P+ VT+  +I+ F +   +E A ++R +M + G+  +V TY+ LI G+   G 
Sbjct: 400 -EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458

Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
             EA RL   MV++   PN V+YN+ +     EG    AL +  +M +K + P+  +Y  
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
           + + LC+    K+A  L  ++++  +       N++      S++ +  ++  +SM+  G
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRAKNDSHSRSMDEEEPASMVFDG 578

Query: 460 LI 461
           L+
Sbjct: 579 LM 580



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 109/238 (45%), Gaps = 15/238 (6%)

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
           QV+   +    ++ + L++YL +S       +L               Y  +I+ Y +  
Sbjct: 64  QVISGKIQSQFFTSSSLLHYLTESETSKTKSRL---------------YEVIINAYVQSQ 108

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
           +++ ++  +  M      P    +N+++  +   +S +        S+   +LD  ++  
Sbjct: 109 SLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGI 168

Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
           +I G    G+I ++F +  E+R  G + N V Y  LI+  CK G  ++A++L   M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
           ++ +  TYT L+    KN   ++  E+++ M   GV P+  TYN +++ L  +   +D
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKD 286


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 236/480 (49%), Gaps = 21/480 (4%)

Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI------- 247
           N++   + L+  ++          FN ++ +L K       LSL  +M   GI       
Sbjct: 55  NDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHF 114

Query: 248 ---------WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
                     PN + F  +I   C  G +  AL LF    V  G  +  + V +  +I+G
Sbjct: 115 QHPHQLMGYHPNTITFTTLIKGLCLKGQIHQAL-LFHDNVVAMGFQL--DQVGYGTLIHG 171

Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
            CK+G    A ++   +    +  NV  Y+T+IDG  +     +A  L  EMV +G+ PN
Sbjct: 172 LCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 231

Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
            V Y++ I   F  G ++ A+ + + MI ++I PD +T++IL  G C++G +K+   +  
Sbjct: 232 VVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFA 291

Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
            ++++ +  +  +Y  L++  C    +  AK +L +M  RG+ PDI +Y  LIDG+CK  
Sbjct: 292 MMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIK 351

Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
            ++ A+ +++ M      P++V YNS+I+GLCK   +  A  L+      G+  D ITY+
Sbjct: 352 KVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYS 411

Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
           ++++    N ++ +A A+ +++++ GI  N   Y ILI+ LCK G  + A  + + +++ 
Sbjct: 412 SILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVK 471

Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
           G      TYT ++  F      +E + L   M  +   PD  TY  II  L  +K   D+
Sbjct: 472 GYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF-DKDENDK 530



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 239/490 (48%), Gaps = 6/490 (1%)

Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
           DA  L   L+  N   P      +L S    K    V  +L +     G     +     
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVL-SLSQQMEFEGINPVLFHFQHP 117

Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
            ++ G+  +   +   +  L    +I +    +  +V+ G+  +   +  +I+ LCK  +
Sbjct: 118 HQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGE 177

Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
              AL L  R+  + + PNVV ++ II+  C+   +  A  L+ +M V  G S  PN VT
Sbjct: 178 TRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM-VSKGIS--PNVVT 234

Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
           ++ +I+GF  +G+++ A ++   MI   I  +V T+  L+DG+ + G  +E   +   M+
Sbjct: 235 YSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMM 294

Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
           K+G+ PN V Y S +       +V  A  +L  M  + + PD  +Y+IL  G C+   V 
Sbjct: 295 KQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVD 354

Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
           +A  L  ++  +H++ D  +YN LI+ LCK   ++ A +L+  M  RG+ PDIITY +++
Sbjct: 355 EAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 414

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL- 530
           D  CK   ++ A+ +   +K    +PN+  Y  +I+GLCK   L+ A ++ +     G  
Sbjct: 415 DALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYN 474

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
           +   TY  +I+G+   G   EA A+ S+M++     + V Y I+I  L       +A +L
Sbjct: 475 ITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534

Query: 591 MKVMILHGII 600
            + MI  G++
Sbjct: 535 -REMITRGLL 543



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 17/213 (7%)

Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           + I Y ++   +    ++  A  ++  + +    P  + +N I+  L K        SL 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 523 QASQRIGL-----------------LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           Q  +  G+                  + IT+ TLI G  + G+I +A      +  +G  
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
           +++VGY  LI+ LCK G  + A +L++ +  + + P+ V Y+T++    K+    +  +L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           + +MV  G+SP+  TY+A+IS        +D +
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 193/374 (51%), Gaps = 7/374 (1%)

Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
           L +  LC+  K ++++     +L+SG+ P+ + +N II+  C+ G +E A +   KM   
Sbjct: 234 LDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKM--- 290

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
              S  P+  T N ++ G C  G ++ A ++    I  G   +  TY T+I G  + G  
Sbjct: 291 VEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRF 350

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLF-AEGDVEGALFVLSDMIDKHICPDHFTYSI 399
           EEA  L  EM ++ L P+   YN+ +  L  AEG VE A    + M++K   PD FT +I
Sbjct: 351 EEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNI 410

Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR- 458
           L +GLC  G +  A KL N  + +    DA +YN +I+ LCK      A  LL+ M  + 
Sbjct: 411 LLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKN 470

Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
           GL+PD  TY T+I GYC+ G +E A Q    M +   KP+L   N ++ GLC++  L  A
Sbjct: 471 GLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKA 530

Query: 519 KSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
             L       G  +DA+TYNT+I+G    G+  EAF + +EM+   +  +   YN ++  
Sbjct: 531 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCA 590

Query: 578 LCKFGCYQQARELM 591
           L   G   +A E M
Sbjct: 591 LADAG-RMEAEEFM 603



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 221/448 (49%), Gaps = 26/448 (5%)

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIIN--------------EACQVGDLEFALK-----LFR 275
           A  ++ RM +  + PN++  N +IN              +A     ++F +K        
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213

Query: 276 KMGVMSGDSVLPNSVTHNCIIN--GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
            +G M   S  P++ ++N I++    C+ G+ + + +    ++++G+  +  TY T+I G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273

Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
           Y R G  E+A +  ++MV++   P+    N  +  L  EG ++ AL + +  I K    D
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333

Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN-NLAAAKQLL 452
             TY+ +  GLC+ G  ++AF L  ++ E+ +  D Y+YN ++  L  +   +  A Q  
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
           + M+ +   PD+ T   L+ G C  G ++ A++++       K  + V YN+II+GLCK+
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKE 453

Query: 513 ASLDAAKSLL-QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
              + A  LL +  ++ GL+ D  TYNT+I GY   G++ +AF   ++M       +   
Sbjct: 454 GRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFT 513

Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
            NIL+  LC+ G   +A +L    I  G   D VTY T+++   K    EE  +L  +M 
Sbjct: 514 CNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMK 573

Query: 631 LSGVSPDNQTYNAIISPL--LGEKSAED 656
              + PD  TYNAI+  L   G   AE+
Sbjct: 574 EKKLGPDCYTYNAILCALADAGRMEAEE 601



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 179/360 (49%), Gaps = 5/360 (1%)

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G T+ + D + +L   G       +N  +    +  ++ + ++   +MV   +  ++ T 
Sbjct: 243 GKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 302

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
           N+++  LC E  L+ AL L+   +  G   + V +N II+  C+ G  E A  L   +  
Sbjct: 303 NILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDL---LAE 359

Query: 280 MSGDSVLPNSVTHNCIINGFCKL-GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
           M    + P+  T+N I+       G+VE A + R  M++     ++ T   L+ G    G
Sbjct: 360 MEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEG 419

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH-ICPDHFTY 397
             + AL+L +  + +G   + V YN+ I  L  EG  E A  +L++M +K+ + PD  TY
Sbjct: 420 MLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTY 479

Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           + +  G CR G V++AF+  N+++E+    D ++ NIL+  LC+   L  A +L ++ I 
Sbjct: 480 NTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWIS 539

Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
           +G   D +TY T+I G CK G  E A  +   MK+ +  P+   YN+I+  L     ++A
Sbjct: 540 KGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEA 599



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 171/374 (45%), Gaps = 12/374 (3%)

Query: 112 DALLLMGNLMSANSVSPL-EFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQ 170
           D L L  +  +  S+  L E LE  L  ++I       ++ ++    + G  E A+    
Sbjct: 235 DVLWLCRSGKTDQSIDKLNELLESGLVPHQI------TYNTIIHGYCREGQVEKAFQFRN 288

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
           K+  K     +   N  L  L     +    KL+   +S G   +  T+N +I  LCKE 
Sbjct: 289 KMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEG 348

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL-KLFRKMGVMSGDSVLPNS 289
           + EEA  L   M +  + P+   +N I+   C + D E  + K F+    M   S  P+ 
Sbjct: 349 RFEEAFDLLAEMEEKKLGPDCYTYNAIL---CALADAEGQVEKAFQFRNKMVEKSFKPDL 405

Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
            T N ++ G C  G ++ A ++    I  G   +  TY T+I G  + G  EEA  L  E
Sbjct: 406 FTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAE 465

Query: 350 M-VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
           M  K GL+P+   YN+ I     EG VE A    + M++K   PD FT +IL +GLCR G
Sbjct: 466 MEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREG 525

Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
            + +A KL N  + +    DA +YN +I+ LCK      A  LL+ M  + L PD  TY 
Sbjct: 526 MLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYN 585

Query: 469 TLIDGYCKGGNIEG 482
            ++      G +E 
Sbjct: 586 AILCALADAGRMEA 599



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 127/303 (41%), Gaps = 22/303 (7%)

Query: 80  FYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY 139
           F TW+ +         ++  I+  L    RF++A  L+   M    + P           
Sbjct: 322 FNTWISKGKAIDAVTYNT--IISGLCKEGRFEEAFDLLAE-MEEKKLGP----------- 367

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
             C    A+  AL  A  Q+   E A+    K+  K     +   N  L  L     +  
Sbjct: 368 -DCYTYNAILCALADAEGQV---EKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDN 423

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSGIWPNVVCFNMII 258
             KL+   +S G   +  T+N +I  LCKE + EEA  L   M  K+G+ P+   +N II
Sbjct: 424 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTII 483

Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
              C+ G +E A +   KM      S  P+  T N ++ G C+ G +  A ++    I  
Sbjct: 484 LGYCREGQVEKAFQFRNKM---VEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISK 540

Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
           G   +  TY T+I G  + G  EEA  L  EM ++ L P+   YN+ +  L   G +E  
Sbjct: 541 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEAE 600

Query: 379 LFV 381
            F+
Sbjct: 601 EFM 603



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 14/185 (7%)

Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
           T I  Y        A Q++  MK++  KPNL+  N++IN L +  S             +
Sbjct: 140 TSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPS----------KPSV 189

Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN--FLCKFGCYQQ 586
            L  AI  N +  G  +  K++EA  +  +M++     +   YN +++  +LC+ G   Q
Sbjct: 190 CLSKAIFTNVIKFG--VKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQ 247

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           + + +  ++  G++P  +TY T++  + +    E+  +  + MV     PD  T N ++ 
Sbjct: 248 SIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLR 307

Query: 647 PLLGE 651
            L  E
Sbjct: 308 GLCTE 312


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 214/415 (51%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+ + H+L S C ++HLL   +   +A  L+  ++S     S  +  E +L++     + 
Sbjct: 6   NSSYRHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A    +  K     V        L HL++       W  YK
Sbjct: 66  FYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN+++   CKE ++  A S++  + K G+ P+VV FN +IN   ++G
Sbjct: 126 EVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M      P+  T++ +ING CK G+++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLI G+ +    + A+ +  +M+ +GL P+ + YN+ I+ L  +G+++    ++ +M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I   + PD  +Y+ L  G C+ G ++ A +L N++++E +  D  +Y  LI+ LC+    
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRA 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
             A+++L  M+  GL PD  TY  +I+ +CK  + + A ++   M++    P +V
Sbjct: 363 GDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVV 417



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 145/272 (53%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++  FCK G +  A+ +  A+ K G+  +V ++ TLI+GY + G  +E  RL   M  
Sbjct: 140 NILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+   Y+  I+ L  EG ++ A  + ++M+D  + P+  T++ L  G C+N  V  
Sbjct: 200 SGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK   L     L+  MI+ GL PD I+Y TLID
Sbjct: 260 AMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A+++   M +   + + V Y ++I+ LC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +        A  +  EM+  G
Sbjct: 380 DNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 154/295 (52%), Gaps = 7/295 (2%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ I+     GD
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGD 186

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + S M      PD +TYSIL  GLC+ G + +A +L N++L+  +V +  ++  
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK+  +  A ++   M+ +GL PD+ITY TLI G CK G ++    + + M    
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306

Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSL----LQASQRIGLLDAITYNTLINGYFINGKIA 550
            KP+ + Y ++I+G CK+  L+ A  L    +Q S R   LD + Y  LI+     G+  
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIR---LDDVAYTALISCLCREGRAG 363

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +A  M  EM +VG+  +   Y ++IN  CK    + A +L++ M   G +P  VT
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 135/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + +VLE       Y +NIL+   CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+GY K G+++   ++   M     +P++  Y+ +INGLCK+  LD A  L       GL
Sbjct: 178 INGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  N K+  A  ++ +M + G++ + + YN LI  LCK G  +Q  +
Sbjct: 238 VPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  MI++G+ PD ++YTTL+    K    E  +EL + M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC 357

Query: 650 GEKSAED 656
            E  A D
Sbjct: 358 REGRAGD 364



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +     EG++  A  V   +    + P   +++ L  G  + G + + F+L + + 
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                 D Y+Y+ILIN LCK   L  A +L + M+  GL+P+ +T+ TLI G+CK   ++
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L     L+      GL  D I+Y TLI
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  A  + ++M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           PD  TYT ++  F K    +   +L  +M   G  P
Sbjct: 379 PDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVP 414



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 1/262 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL +  C+ G ++ A  + + + +  +     S+N LIN   K  +L    +L S+
Sbjct: 137 YFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G  PD+ TY  LI+G CK G ++ A +++  M      PN V + ++I+G CK+  
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +     GL  D ITYNTLI G    G++ +   +  EM   G+  +K+ Y  
Sbjct: 257 VDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A EL   MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIISPLLGEKSAE 655
           + PDN TY  II+    ++ ++
Sbjct: 377 LKPDNGTYTMIINEFCKKRDSK 398


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 215/415 (51%), Gaps = 4/415 (0%)

Query: 87  NNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKAT 145
           N+   H+L S C ++HLL   +   +A  L+  ++S     S  +  E +L++    ++ 
Sbjct: 6   NSSNRHTLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSD 65

Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
             VF  L+ A  + G    A    +  K     V        L HL++       W  YK
Sbjct: 66  FYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYK 125

Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
           E++ CGY  ++  FN+++   CKE ++  A S++  + K G+ P+VV FN +IN   ++G
Sbjct: 126 EVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185

Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
           DL+     FR    M      P+  T++ +ING CK G+++ A E+   M+  G+  N  
Sbjct: 186 DLDEG---FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242

Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
           T+ TLI G+ +    + A+ +  +M+ +GL P+ + YN+ I+ L  +G+++    ++ +M
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302

Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
           I   + PD  +Y+ L  G C+ G ++ A +L N++++E +  D  +Y  LI+ LC+    
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRA 362

Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
           + A+++L  M+  GL PD  TY  +I+ +CK  + + A ++   M++    P +V
Sbjct: 363 SDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVV 417



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 145/272 (53%), Gaps = 1/272 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N ++  FCK G +  A+ +  A+ K G+  +V ++ TLI+GY + G  +E  RL   M  
Sbjct: 140 NILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHA 199

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G  P+   Y+  I+ L  EG ++ A  + ++M+D  + P+  T++ L  G C+N  V  
Sbjct: 200 SGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDL 259

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK   L     L+  MI+ GL PD I+Y TLID
Sbjct: 260 AMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLID 319

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G++E A+++   M +   + + V Y ++I+ LC++     A+ +L+    +GL  
Sbjct: 320 GSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKP 379

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           D  TY  +IN +        A  +  EM+  G
Sbjct: 380 DNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%), Gaps = 7/295 (2%)

Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
           +++ G   ++  +  L+  + + G    A  + D + K GL P+ V +N+ I+     GD
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGD 186

Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
           ++    + S M      PD +TYSIL  GLC+ G + +A +L N++L+  +V +  ++  
Sbjct: 187 LDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTT 246

Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           LI+  CK+  +  A ++   M+ +GL PD+ITY TLI G CK G ++    + + M    
Sbjct: 247 LIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNG 306

Query: 495 KKPNLVIYNSIINGLCKDASLDAA----KSLLQASQRIGLLDAITYNTLINGYFINGKIA 550
            KP+ + Y ++I+G CK+  L+ A      ++Q S R   LD + Y  LI+     G+ +
Sbjct: 307 LKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIR---LDDVAYTALISCLCREGRAS 363

Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVT 605
           +A  M  EM +VG+  +   Y ++IN  CK    + A +L++ M   G +P  VT
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 135/247 (54%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + +VLE       Y +NIL+   CK   +  A+ +  ++   GL P ++++ TL
Sbjct: 118 KLVWDFYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTL 177

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           I+GY K G+++   ++   M     +P++  Y+ +INGLCK+  LD A  L       GL
Sbjct: 178 INGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGL 237

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  N K+  A  ++ +M + G++ + + YN LI  LCK G  +Q  +
Sbjct: 238 VPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHD 297

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  MI++G+ PD ++YTTL+    K    E  +EL + M+   +  D+  Y A+IS L 
Sbjct: 298 LIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLC 357

Query: 650 GEKSAED 656
            E  A D
Sbjct: 358 REGRASD 364



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 1/276 (0%)

Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
           +N  +     EG++  A  V   +    + P   +++ L  G  + G + + F+L + + 
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198

Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
                 D Y+Y+ILIN LCK   L  A +L + M+  GL+P+ +T+ TLI G+CK   ++
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258

Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLI 540
            A+++Y+ M      P+L+ YN++I GLCK   L     L+      GL  D I+Y TLI
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318

Query: 541 NGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
           +G    G +  A  + ++M    I ++ V Y  LI+ LC+ G    A ++++ M+  G+ 
Sbjct: 319 DGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLK 378

Query: 601 PDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
           PD  TYT ++  F K    +   +L  +M   G  P
Sbjct: 379 PDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLP 414



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 1/262 (0%)

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
           + ++IL +  C+ G ++ A  + + + +  +     S+N LIN   K  +L    +L S+
Sbjct: 137 YFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSA 196

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           M   G  PD+ TY  LI+G CK G ++ A +++  M      PN V + ++I+G CK+  
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK 256

Query: 515 LDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           +D A  + +     GL  D ITYNTLI G    G++ +   +  EM   G+  +K+ Y  
Sbjct: 257 VDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTT 316

Query: 574 LINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSG 633
           LI+  CK G  + A EL   MI   I  D V YT L++   +     +  ++  +M+  G
Sbjct: 317 LIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVG 376

Query: 634 VSPDNQTYNAIISPLLGEKSAE 655
           + PDN TY  II+    ++ ++
Sbjct: 377 LKPDNGTYTMIINEFCKKRDSK 398


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 233/447 (52%), Gaps = 5/447 (1%)

Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
           LY+EMV  G   +V TF  ++Y LCK  KL E   L   M K G+  N V + ++++   
Sbjct: 11  LYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALF 70

Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
           + G +  AL     M ++ G++   + +    +I+G  K G+++ AE +   + +  +  
Sbjct: 71  KAGKVAEALMTLACM-IVRGNNF--DVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVP 127

Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
           N  TY+ LIDG  + G    A     EM ++  +PN + Y+S I+    +G +  A  VL
Sbjct: 128 NYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVL 187

Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
             M+ K+  P+  TY+IL  G  + G    A  L++++ +  +  + +  +  +N + +S
Sbjct: 188 RKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRS 247

Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
             +  A++L++ M   GL PD++ Y  L+DG+ K G +  A+ + + M       ++V +
Sbjct: 248 GRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTF 307

Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
           N +IN L K    D  +S+  A + +GL  D  TYNT++NG F  G    A  +++EM++
Sbjct: 308 NVLINCLFKLGKSDT-ESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKS 366

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
             +  N +  NI+IN LC+ G  + A +++K M+L G+ P   TY  L+   SK+   + 
Sbjct: 367 RKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADT 426

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
           +++ H+ +V   +  D   YN +IS L
Sbjct: 427 ILQTHELLVNMQLKVDKDVYNILISNL 453



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 265/550 (48%), Gaps = 30/550 (5%)

Query: 117 MGNL-MSANSVSPLEFLEGLLDSYEICKATPAVFDALVR-------ACT----------Q 158
           MG + M+ N+VS    L+ L  + ++ +A   +   +VR       ACT          Q
Sbjct: 50  MGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQ 109

Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
           I   E  +  + +L +  + ++  A    +    KL +I        EM     V NV T
Sbjct: 110 IKEAEYLFCNLYQLNLVPNYITYSA---LIDGRCKLGDINGAESALHEMEEKDCVPNVIT 166

Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
           ++ +I    K+  L +A  +  +M+     PN+  + ++++ + + G  + AL L+ KM 
Sbjct: 167 YSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKM- 225

Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
                 +  N    +  +N   + GR+E AEE+   M   G+  ++  Y  L+DG+ + G
Sbjct: 226 --KQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSG 283

Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG--DVEGALFVLSDMIDKHICPDHFT 396
               AL L  EM  + ++ + V +N  I+ LF  G  D E    + S M +  + PD  T
Sbjct: 284 KVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTES---IYSAMREMGLSPDLAT 340

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ +  G  + G    A +L N++    ++ +A + NI+IN LC++  +  A  +L  M+
Sbjct: 341 YNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMV 400

Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
           + GL P   TY  L++   K    +  +Q +E +  ++ K +  +YN +I+ LCK     
Sbjct: 401 LMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTR 460

Query: 517 AAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
            A ++L+  +  G++ D  TYN LI+GY I+  +  AF  +S M +  ++ +   YN+L+
Sbjct: 461 KATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLL 520

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
             L K G   +A +L+  +   G++P+  TY TL+    K  + +E + ++ +MV+ G  
Sbjct: 521 GGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 580

Query: 636 PDNQTYNAII 645
           P  + YN +I
Sbjct: 581 PKPRAYNMLI 590



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 247/494 (50%), Gaps = 6/494 (1%)

Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
           C     +EG   +++++   G +++  ++   L  L K  ++         M+  G   +
Sbjct: 35  CKHGKLSEGKL-LLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFD 93

Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
           V    ++I  L K  +++EA  L+  + +  + PN + ++ +I+  C++GD+  A     
Sbjct: 94  VIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALH 153

Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
           +M        +PN +T++ +ING+ K G +  A ++   M+      N+ TYA L+DG  
Sbjct: 154 EM---EEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSF 210

Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
           + G  + AL L  +M + GL  N  + ++ ++ +   G +E A  +++ M    + PD  
Sbjct: 211 KAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLV 270

Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
            Y+ L  G  ++G V  A  L  ++  +++V D  ++N+LIN L K    +  + + S+M
Sbjct: 271 NYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAM 329

Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
              GL PD+ TY T+++G  K GN   A++++  MK  +  PN +  N +INGLC+   +
Sbjct: 330 REMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRM 389

Query: 516 DAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
           + A  +L+    +GL   + TY  L+N    + +          + N+ + V+K  YNIL
Sbjct: 390 ENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNIL 449

Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
           I+ LCK G  ++A  ++K M   GII D  TY  L+  +  +   +     +  M+   V
Sbjct: 450 ISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERV 509

Query: 635 SPDNQTYNAIISPL 648
           SPD +TYN ++  L
Sbjct: 510 SPDIETYNLLLGGL 523



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 221/504 (43%), Gaps = 38/504 (7%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C      + +L+    + G    A+ V++K+  K    +I  +   L    K        
Sbjct: 160 CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIAL 219

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            LY +M   G  +NV   +  +  + +  ++EEA  L  +M   G+ P++V +  +++  
Sbjct: 220 DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 279

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
            + G +  AL L ++M   +  +V+ + VT N +IN   KLG+ +  E I  AM + G+ 
Sbjct: 280 LKSGKVSSALNLAQEM---TSKNVVFDIVTFNVLINCLFKLGKSD-TESIYSAMREMGLS 335

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            ++ TY T+++G  + G+   AL L +EM  R L+PN +  N  I+ L   G +E A+ +
Sbjct: 336 PDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDI 395

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           L +M+   + P   TY IL     ++       + H  ++   +  D   YNILI+ LCK
Sbjct: 396 LKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCK 455

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
                 A  +L  M  RG+I D  TY  LI GYC   +++ A   Y  M      P    
Sbjct: 456 LGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSP---- 511

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
                                         D  TYN L+ G    G I EA  + SE++ 
Sbjct: 512 ------------------------------DIETYNLLLGGLSKAGLIHEADDLLSEIKK 541

Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
            G+  N   Y  L+   CK    ++   +   M++ G IP    Y  L+  FSK    ++
Sbjct: 542 RGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQ 601

Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
             EL ++M   GVSP   TY+ +I
Sbjct: 602 AKELMNEMQTKGVSPTCTTYDILI 625



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 198/397 (49%), Gaps = 5/397 (1%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           + DA V    + G  E A +++ K+   G    +  + N +   +K  ++     L +EM
Sbjct: 236 ILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEM 295

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
            S   V ++ TFN++I  L K  K  +  S+Y  M + G+ P++  +N ++N   + G+ 
Sbjct: 296 TSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNW 354

Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             AL+L+ +M       ++PN++T N +ING C+ GR+E A +I   M+  G+     TY
Sbjct: 355 TSALELWNEM---KSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTY 411

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
             L++  ++   ++  L+  + +V   L  +  VYN  I  L   G    A  VL DM +
Sbjct: 412 RILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEE 471

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
           + I  D  TY+ L  G C +  +K+AF  ++ +L E +  D  +YN+L+  L K+  +  
Sbjct: 472 RGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHE 531

Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
           A  LLS +  RGL+P+  TY TL+ G+CK  N +  +++Y  M      P    YN +I 
Sbjct: 532 ADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIG 591

Query: 508 GLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGY 543
              K   +  AK L+   Q  G+     TY+ LI G+
Sbjct: 592 YFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGW 628



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 190/383 (49%), Gaps = 5/383 (1%)

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           LE AL L+ +M    G  + P+ VT   I+ G CK G++   + +   M K G++ N  +
Sbjct: 5   LEEALTLYEEM---VGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y  L+D   + G   EAL     M+ RG   + +     I  LF  G ++ A ++  ++ 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
             ++ P++ TYS L  G C+ G +  A    +++ E+  V +  +Y+ LIN   K   L 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A ++L  M+ +  +P+I TY  L+DG  K G  + A+ +Y  MK+   K N+ I ++ +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
           N + +   ++ A+ L+      GL  D + Y  L++G+  +GK++ A  +  EM +  + 
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            + V +N+LIN L K G       +   M   G+ PD  TY T++    K  +    +EL
Sbjct: 302 FDIVTFNVLINCLFKLG-KSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 360

Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
            ++M    + P+  T N +I+ L
Sbjct: 361 WNEMKSRKLIPNAITCNIMINGL 383



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 38/322 (11%)

Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
           +  +E AL +  +M+   I PD  T+  +  GLC++G + +   L  ++ +  M  +  S
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
           Y IL++ L K+  +A A   L+ MIVRG   D+I    LIDG  K G I+ A  ++ N+ 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIA 550
           ++   PN + Y+++I+G CK   ++ A+S L +  ++  + + ITY++LINGY   G + 
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 551 EAFA-----------------------------------MFSEMRNVGIAVNKVGYNILI 575
           +AF                                    ++S+M+  G+  N    +  +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
           N + + G  ++A EL+  M   G+ PD V YT L+  F K+      + L  +M    V 
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 636 PDNQTYNAIISPL--LGEKSAE 655
            D  T+N +I+ L  LG+   E
Sbjct: 302 FDIVTFNVLINCLFKLGKSDTE 323


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 216/416 (51%), Gaps = 8/416 (1%)

Query: 96  SSCAIVHLLVNWRRFDDALLLMGNLMSANSV-SPLEFLEGLLDSYEICKATPAVFDALVR 154
           S C ++H L   +   +A  L+  ++S     S       +L++    ++   VF  L+ 
Sbjct: 2   SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61

Query: 155 ACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVE 214
           A  + G    A +  +  +     V        L HL+KL      W  Y+E++ CGY  
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE--FALK 272
           ++  FN++++  CK+  +  A S++  + K G+ P+VV +N ++N   + GDL+  F LK
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLK 181

Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
                  M    V P+  T++ +ING CK  +++ A E+   M+  G+  N  T+ TLID
Sbjct: 182 -----SXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 236

Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
           G+ + G  + A+ +  +M+ + L P+ + YN+ I+ L  +GD++ A  ++ +M  K + P
Sbjct: 237 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKP 296

Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
           D  TY+ L  G C+ G +  AF+   ++++E++  D  +Y  LI+  C+      A+++L
Sbjct: 297 DKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKML 356

Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             M+  GL PD  TY  +I+ +CK G++    ++ + M++    P++V YN ++NG
Sbjct: 357 REMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
           +E+++ G   +   +N  +H    +GD+  A  V   +    + P   +Y+ L  G  R 
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRX 171

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G + + F L + +L   +  D Y+Y++LIN LCK + +  A +L   M+V+GL+P+ +T+
Sbjct: 172 GDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
            TLIDG+CK G ++ A+++Y+ M      P+L+ YN++I GLCK   L  A  L+     
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSV 291

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GL  D ITY TLING    G +  AF     M    I +++V Y  LI+  C+ G    
Sbjct: 292 KGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVD 351

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A ++++ M+  G+ PD  TYT ++  F K        +L  +M   G  P   TYN +++
Sbjct: 352 AEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMN 411



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 157/285 (55%), Gaps = 1/285 (0%)

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N +++ FCK G +  A+ +  A+ K G+  +V +Y TL++GY R G  +E   L   M+ 
Sbjct: 127 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLA 186

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
            G+ P+   Y+  I+ L  E  ++ A  +  +M+ K + P+  T++ L  G C+NG V  
Sbjct: 187 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
           A +++ Q+L + +  D  +YN LI  LCK  +L  A  L+  M V+GL PD ITY TLI+
Sbjct: 247 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIN 306

Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
           G CK G+++ A +  + M +   + + V Y ++I+G C++     A+ +L+    +GL  
Sbjct: 307 GCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKP 366

Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           DA TY  +IN +   G +     +  EM+  G   + V YN+L+N
Sbjct: 367 DARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMN 411



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
           K  +  + ++LE       Y +NIL++  CK  ++  A+ +  ++   GL P +++Y TL
Sbjct: 105 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 164

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
           ++GY + G+++    +   M     +P++  Y+ +INGLCK++ +D A  L       GL
Sbjct: 165 MNGYIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 224

Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
           + + +T+ TLI+G+  NG++  A  ++ +M +  ++ + + YN LI  LCK G  +QA  
Sbjct: 225 VPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHH 284

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
           L+  M + G+ PD +TYTTL+    K    +   E    M+   +  D   Y A+IS   
Sbjct: 285 LIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXC 344

Query: 650 GEKSAED 656
            E  + D
Sbjct: 345 QEGRSVD 351



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 54/273 (19%)

Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRG------------------LIPDIITYGTLI 471
           +SY  +I++LC    L  AK L+  ++ R                      DI  +  LI
Sbjct: 1   HSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 60

Query: 472 DGYCKGGNIEGAVQVY-------------------ENMKKVE----------------KK 496
             Y + G +  A++ Y                   E++ K++                  
Sbjct: 61  AAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAM 555
            +L  +N +++  CKD  +  A+S+  A  + GL  + ++YNTL+NGY   G + E F +
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXL 180

Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSK 615
            S M   G+  +   Y++LIN LCK      A EL   M++ G++P+ VT+TTL+    K
Sbjct: 181 KSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240

Query: 616 NCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           N   +  +E++  M+   +SPD  TYN +I  L
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGL 273


>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 821

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/619 (25%), Positives = 276/619 (44%), Gaps = 109/619 (17%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
           L F E  +DS  +       + A+V A  Q+G  +   D++++L+ +G       ++N++
Sbjct: 42  LGFFETAVDS-GVLVPNLVTYTAVVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 100

Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
               K   +       ++MV  G   +V +++++I  L +E  +E+AL L  +M+K GI 
Sbjct: 101 HGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIE 160

Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRK-------------------------------- 276
           PN++ +  II   C+ G LE A  LF +                                
Sbjct: 161 PNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSM 220

Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
           +G M    + P+ +T+N +ING CK GRV  A++I       G+  +V TY+TL+D Y +
Sbjct: 221 LGDMEQRGIQPSILTYNTVINGLCKAGRVSEADDI-----SKGVVGDVITYSTLLDSYVK 275

Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
             + +  L +    V+  +  + V+ N  +      G    A  +   M +  + PD  T
Sbjct: 276 VENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTAT 335

Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
           Y+ + +G C+ G ++ A ++ N+ L +  V  A  YN +I+ LCK   L  A ++L  + 
Sbjct: 336 YATMIEGYCKTGQIEDALEMFNE-LRKSSVSAAVCYNHIIDALCKKGMLETAMEVLIELW 394

Query: 457 VRGLIPDIITYGTLIDG-----------------------------------YCKGGNIE 481
            +GL  DI T  TL+                                      C  G+ E
Sbjct: 395 EKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQLNSDICLGMLNDAILLLCNRGSFE 454

Query: 482 GAVQVY---------------------ENMKKVE-------------KKPNLVIYNSIIN 507
            A++VY                     +N++ ++                +++ Y  IIN
Sbjct: 455 AAIEVYMIMMRKDLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 514

Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
           GLCK+  L  A  L   ++  G+ L+ ITYN+LING    G + EA  +F  + N+G+  
Sbjct: 515 GLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLVP 574

Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
           ++V Y ILI+ LCK G +  A +L+  M+  G++P+ + Y ++V  + K    E+ + + 
Sbjct: 575 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVL 634

Query: 627 DDMVLSGVSPDNQTYNAII 645
              ++  V PD  T ++II
Sbjct: 635 SRKMMGRVKPDAFTVSSII 653



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 203/400 (50%), Gaps = 34/400 (8%)

Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
           +I+  C++G  E AL  F +  V SG  ++PN VT+  +++  C+LG+V+   ++   + 
Sbjct: 28  VISGFCKIGKPELALGFF-ETAVDSG-VLVPNLVTYTAVVSALCQLGKVDEVRDLVRRLE 85

Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
             G + +   Y+  I GY +GG+  +AL    +MV++G+  + V Y+  I  L  EG++E
Sbjct: 86  DEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSREGNIE 145

Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
            AL +L  MI + I P+  TY+ + +GLC+ G ++ AF L +++L   +  D + Y  LI
Sbjct: 146 KALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLI 205

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG------------------ 478
           + +CK  NL  A  +L  M  RG+ P I+TY T+I+G CK G                  
Sbjct: 206 DGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEADDISKGVVGDVIT 265

Query: 479 ------------NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
                       NI+  +++     + +   +LV+ N ++       +   A +L +A  
Sbjct: 266 YSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMP 325

Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
            +GL  D  TY T+I GY   G+I +A  MF+E+R   ++   V YN +I+ LCK G  +
Sbjct: 326 EMGLTPDTATYATMIEGYCKTGQIEDALEMFNELRKSSVSA-AVCYNHIIDALCKKGMLE 384

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
            A E++  +   G+  D  T  TL+     N   + +++L
Sbjct: 385 TAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILDL 424



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 213/462 (46%), Gaps = 49/462 (10%)

Query: 175 KGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEE 234
           KG    +  ++  L   VK+  I    ++ +  V      ++   N+++ A        E
Sbjct: 257 KGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYGE 316

Query: 235 ALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNC 294
           A +LY  M + G+ P+   +  +I   C+ G +E AL++F ++      S +  +V +N 
Sbjct: 317 ADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDALEMFNELR----KSSVSAAVCYNH 372

Query: 295 IINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG-YARGGSSEEALRLCDEMVKR 353
           II+  CK G +E A E+   + + G+  ++ T  TL+   +A GG       + D + K 
Sbjct: 373 IIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLLHSIHANGGDK----GILDLVYKV 428

Query: 354 GLMPNNV---VYNSTIHWLFAEGDVEGALFVLSDMIDKHICP------------------ 392
             + +++   + N  I  L   G  E A+ V   M+ K +                    
Sbjct: 429 EQLNSDICLGMLNDAILLLCNRGSFEAAIEVYMIMMRKDLTVTFPSTILKTLVDNLRSLD 488

Query: 393 ----------------DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
                           D   Y+I+  GLC+ G + +A  L N    + +  +  +YN LI
Sbjct: 489 AYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLI 548

Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
           N LC+   L  A +L  S+   GL+P  +TYG LID  CK G    A ++ ++M      
Sbjct: 549 NGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV 608

Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL--DAITYNTLINGYFINGKIAEAFA 554
           PN++IYNSI++G CK    + A  +L + + +G +  DA T +++I GY   G + EA  
Sbjct: 609 PNILIYNSIVDGYCKLGQTEDAMRVL-SRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALR 667

Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
           +F+E +   I+ + +G+  LI   C  G  ++AR L++ M++
Sbjct: 668 VFAEFKEENISADFLGFLFLIKCFCTKGRMEEARGLLREMLV 709



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 235/527 (44%), Gaps = 50/527 (9%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           + A++R   + G  E A+ +  ++   G  V    +   +  + K   + R + +  +M 
Sbjct: 166 YTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDME 225

Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
             G   ++ T+N VI  LCK  ++ EA  +       G+  +V+ ++ +++   +V +++
Sbjct: 226 QRGIQPSILTYNTVINGLCKAGRVSEADDI-----SKGVVGDVITYSTLLDSYVKVENID 280

Query: 269 FALKLFRKMGVMSGDSVLP-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
             L++ R+      ++ +P + V  N ++  F  +G    A+ +  AM + G+  +  TY
Sbjct: 281 AVLEIRRRFV----EAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATY 336

Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
           AT+I+GY + G  E+AL + +E+ ++  +   V YN  I  L  +G +E A+ VL ++ +
Sbjct: 337 ATMIEGYCKTGQIEDALEMFNEL-RKSSVSAAVCYNHIIDALCKKGMLETAMEVLIELWE 395

Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA--YSYNILINYLCKSNNL 445
           K +  D  T   L   +  NG  K    L  +V  E +  D      N  I  LC   + 
Sbjct: 396 KGLYLDIHTSRTLLHSIHANGGDKGILDLVYKV--EQLNSDICLGMLNDAILLLCNRGSF 453

Query: 446 AAAKQL------------LSSMIVRGLIP----------------------DIITYGTLI 471
            AA ++              S I++ L+                       D+I Y  +I
Sbjct: 454 EAAIEVYMIMMRKDLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIII 513

Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
           +G CK G +  A+ +    K      N + YNS+INGLC+   L  A  L  +   IGL+
Sbjct: 514 NGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLV 573

Query: 532 DA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
            + +TY  LI+     G   +A  +   M + G+  N + YN +++  CK G  + A  +
Sbjct: 574 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRV 633

Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
           +   ++  + PD  T ++++  + K    EE + +  +     +S D
Sbjct: 634 LSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISAD 680



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 42/338 (12%)

Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI-CPDHFTYSILTKGLCRNGCVKQAFKL 416
           +N V ++ I      G  E AL      +D  +  P+  TY+ +   LC+ G V +   L
Sbjct: 21  DNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTAVVSALCQLGKVDEVRDL 80

Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
             ++ +E    D   Y+  I+   K   L  A      M+ +G+  D+++Y  LIDG  +
Sbjct: 81  VRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGLSR 140

Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
            GNIE A+ +   M K   +PNL+ Y +II GLCK   L+ A  L       G+ +D   
Sbjct: 141 EGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDEFL 200

Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
           Y TLI+G    G +  AF+M  +M   GI  + + YN +IN LCK G   +A ++ K   
Sbjct: 201 YVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEADDISK--- 257

Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD---------DMVLS-------------- 632
             G++ D +TY+TL+  + K  + + V+E+           D+V+               
Sbjct: 258 --GVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMDLVMCNILLKAFLLVGAYG 315

Query: 633 ------------GVSPDNQTYNAIISPLLGEKSAEDQV 658
                       G++PD  TY  +I         ED +
Sbjct: 316 EADALYRAMPEMGLTPDTATYATMIEGYCKTGQIEDAL 353



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 157/353 (44%), Gaps = 57/353 (16%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN--EIGRFWKLYKE 206
           ++ ++ A  + G  E A +V+ +L  KG  + IH     L H +  N  + G    +YK 
Sbjct: 370 YNHIIDALCKKGMLETAMEVLIELWEKGLYLDIHTSRTLL-HSIHANGGDKGILDLVYK- 427

Query: 207 MVSCGYVENVNT------FNLVIYALCKECKLEEALSLYYRMLKSGI---WP-------- 249
                 VE +N+       N  I  LC     E A+ +Y  M++  +   +P        
Sbjct: 428 ------VEQLNSDICLGMLNDAILLLCNRGSFEAAIEVYMIMMRKDLTVTFPSTILKTLV 481

Query: 250 -----------------------NVVCFNMIINEACQVGDLEFALKL--FRKMGVMSGDS 284
                                  +V+ + +IIN  C+ G L  AL L  F K        
Sbjct: 482 DNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAK-----SKG 536

Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
           V  N++T+N +ING C+ G +  A  +  ++   G+  +  TY  LID   + G   +A 
Sbjct: 537 VTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAE 596

Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
           +L D MV +GL+PN ++YNS +      G  E A+ VLS  +   + PD FT S + KG 
Sbjct: 597 KLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGY 656

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           C+ G +++A ++  +  EE++  D   +  LI   C    +  A+ LL  M+V
Sbjct: 657 CKKGDMEEALRVFAEFKEENISADFLGFLFLIKCFCTKGRMEEARGLLREMLV 709


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/580 (25%), Positives = 267/580 (46%), Gaps = 21/580 (3%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
            P  AL ++  + E     H+ E+     + ++ + R  D +  M  +         EF+
Sbjct: 101 DPIRALSYFYSISEFPTVLHTTET----CNFMLEFLRVHDKVEDMAAV--------FEFM 148

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
           +      +I +     +  + +A +  G       V+ K++  G  ++ +++N  +  L+
Sbjct: 149 QK-----KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLI 203

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +    G   ++Y+ MVS G   ++ T++ ++ AL K+   E  + L   M   G+ PNV 
Sbjct: 204 QSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY 263

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            F + I    + G ++ A ++FR+M     +   P+ VT+  +I+  C  G++E A+E+ 
Sbjct: 264 TFTICIRVLGRAGKIDEAYEIFRRM---DDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M   G   +   Y TL+D +   G  +       +M   G MP+ V +   +  L   
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
            D + A      M  + I P+  TY+ L  GL R G ++ A KL + +    +   AY+Y
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTY 440

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
              I+Y  KS     A +    M  +G++P+I+     +    + G +  A  ++  +++
Sbjct: 441 ITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
               P+ V YN ++    K   +D A +LL    R G   D I  N+LI+  +  G++ E
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A+ MF  M+++ ++   V YN L++ L K G  Q+A EL + MI     P+ +++ TL+ 
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLD 620

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
            F KN   E  +++   M +    PD  TYN +I  L+ E
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKE 660



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 252/567 (44%), Gaps = 69/567 (12%)

Query: 148  VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
             ++ +++  +++G  + A +++ ++   G    +   N+ +  L K   +   W+++  M
Sbjct: 509  TYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568

Query: 208  VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
                    V T+N ++  L KE ++++A+ L+  M+     PN + FN +++  C+  ++
Sbjct: 569  KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEV 628

Query: 268  EFALKLFRKMGVMS-------------------------------GDSVLPNSVTHNCII 296
            E ALK+F KM VM                                  S+ P+ VT   ++
Sbjct: 629  ELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLL 688

Query: 297  NGFCKLGRVEFAEEI-RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV---- 351
             G  K G++  A  I R  M +     N   +  L+ G       ++A+   +E+V    
Sbjct: 689  PGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGI 748

Query: 352  --------------------------------KRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
                                            K G+ P    YN  I  L      E A 
Sbjct: 749  CREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAW 808

Query: 380  FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
             +  DM +    PD FT+++L     ++G + + F+L+ +++      DA +YNI+I+ L
Sbjct: 809  DLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868

Query: 440  CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
             KSNNL  A      ++     P   TYG LIDG  K G +E A++++E M     KPN 
Sbjct: 869  AKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNC 928

Query: 500  VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
             I+N +ING  K    + A  L +     G+  D  +Y  L++   + G++ EA   F+E
Sbjct: 929  AIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNE 988

Query: 559  MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
            +++ G+  + + YN +IN L K    ++A  L   M   GI+PD  TY +L+        
Sbjct: 989  LKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGM 1048

Query: 619  PEEVIELHDDMVLSGVSPDNQTYNAII 645
             E+   +++++ L+G+ PD  TYNA+I
Sbjct: 1049 VEQAKRMYEELQLAGLEPDVFTYNALI 1075



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/582 (24%), Positives = 247/582 (42%), Gaps = 77/582 (13%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E C      +  L+ A    G  E A ++  K+K  GH      +   L       ++  
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
           F + + +M + GY+ +V TF +++  LCK    +EA + +  M K GI PN+  +N +I 
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410

Query: 260 EACQVGDLEFALKLFRKM---GV-----------------------------MSGDSVLP 287
              + G +E ALKL   M   GV                             M    ++P
Sbjct: 411 GLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVP 470

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           N V  N  +    ++GR+  A+ +   + + G+  +  TY  ++  Y++ G  +EA+ L 
Sbjct: 471 NIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLL 530

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            EM++ G  P+ +V NS I  L+  G V+ A  +   M D  + P   TY+ L  GL + 
Sbjct: 531 SEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKE 590

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
           G V++A +L   ++ +    +  S+N L++  CK++ +  A ++ S M V    PD++TY
Sbjct: 591 GRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTY 650

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK-----DASLDAAKSLL 522
            T+I G  K   +  A   +  +KK    P+ V   +++ GL K     DA   A   + 
Sbjct: 651 NTVIYGLIKENKVNHAFWFFHQLKK-SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMY 709

Query: 523 QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEM----------------------- 559
           Q   R+   +   +  L+ G  +  ++ +A     E+                       
Sbjct: 710 QVRFRV---NRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHK 766

Query: 560 -------------RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
                        + +GI+     YN LI  L +    ++A +L K M   G  PD  T+
Sbjct: 767 RELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTF 826

Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             L+    K+    E+ EL+ +M+     PD  TYN +IS L
Sbjct: 827 NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSL 868



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 233/484 (48%), Gaps = 19/484 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  K +   + AL+ A  +   +E    ++++++  G   +++ +   +  L +  +I  
Sbjct: 221 EGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDE 280

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            +++++ M   G   ++ T+ ++I ALC   +LE A  L+ +M  +G  P+ V +  +++
Sbjct: 281 AYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD 340

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           +    GDL+   + + +   M  D  +P+ VT   +++  CK    + A      M K G
Sbjct: 341 KFNDFGDLDTFKEFWSQ---MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N+ TY TLI G  R G  E+AL+L D M   G+ P    Y + I +    G+   A+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAV 457

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M  K I P+    +     L   G +++A  + N + E  +  D+ +YN+++   
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K   +  A  LLS MI  G  PD+I   +LID   K G ++ A Q+++ MK ++  P +
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577

Query: 500 VIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN++++GL K+  +  A  L ++   +    + I++NTL++ +  N ++  A  MFS+
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637

Query: 559 MRNVGIAVNKVGYNILINFLCK-------FGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           M  +    + + YN +I  L K       F  + Q ++ M         PD+VT  TL+ 
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMH--------PDHVTICTLLP 689

Query: 612 RFSK 615
              K
Sbjct: 690 GLVK 693



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 199/408 (48%), Gaps = 8/408 (1%)

Query: 101  VHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
            V   VN   ++D  L+ G L+ A     + F E L+ +  IC+    +   LVR   +  
Sbjct: 711  VRFRVNRSFWED--LMGGTLVEAEMDKAIIFAEELVLN-GICREDSFLI-PLVRVLCKHK 766

Query: 161  ATEGAYDVIQKLKVK-GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
                AY +  K   K G S ++ ++N  +  L++++   + W L+K+M + G   +  TF
Sbjct: 767  RELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTF 826

Query: 220  NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
            N+++    K  K+ E   LY  M+     P+ + +N++I+   +  +L+ AL  F  +  
Sbjct: 827  NMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDL-- 884

Query: 280  MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
            +S D   P   T+  +I+G  K+GR+E A  +   M   G   N   +  LI+GY + G 
Sbjct: 885  VSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943

Query: 340  SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
            +E A +L   MV  G+ P+   Y   +  L   G V+ AL+  +++    + PD   Y+ 
Sbjct: 944  TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003

Query: 400  LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
            +  GL ++  +++A  L+N++    +V D Y+YN L+  L  +  +  AK++   + + G
Sbjct: 1004 IINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063

Query: 460  LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
            L PD+ TY  LI GY    N E A  VY+NM      PN+  Y  + N
Sbjct: 1064 LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 217/501 (43%), Gaps = 38/501 (7%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            CK     ++ ++    +      A+    +LK   H   +      L  LVK  +IG   
Sbjct: 643  CKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICT-LLPGLVKCGQIGDAI 701

Query: 202  KLYKE-MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
             + ++ M    +  N + +  ++     E ++++A+     ++ +GI         ++  
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 261  ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
             C+     +A ++F K     G S  P   ++NC+I    ++   E A ++   M   G 
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGIS--PTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGC 819

Query: 321  DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
              +  T+  L+  + + G   E   L  EM+ R   P+ + YN  I  L    +++ AL 
Sbjct: 820  APDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALD 879

Query: 381  VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
               D++     P   TY  L  GL + G +++A +L  ++ +     +   +NILIN   
Sbjct: 880  FFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYG 939

Query: 441  KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
            K  +   A QL   M+  G+ PD+ +Y  L+D  C  G ++ A+  +  +K     P+ +
Sbjct: 940  KIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFI 999

Query: 501  IYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMR 560
             YN IINGL K             SQR                     + EA A+++EMR
Sbjct: 1000 AYNRIINGLGK-------------SQR---------------------MEEALALYNEMR 1025

Query: 561  NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
            N GI  +   YN L+  L   G  +QA+ + + + L G+ PD  TY  L+  +S + +PE
Sbjct: 1026 NRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPE 1085

Query: 621  EVIELHDDMVLSGVSPDNQTY 641
                ++ +M++ G +P+  TY
Sbjct: 1086 HAYTVYKNMMVDGCNPNIGTY 1106



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 193/443 (43%), Gaps = 14/443 (3%)

Query: 137  DSYEICKATPAVFDALVRACTQIG-ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLN 195
            D   IC   P +       C QIG A   A D + +++ +   V+   W + +   +   
Sbjct: 680  DHVTICTLLPGLV-----KCGQIGDAISIARDFMYQVRFR---VNRSFWEDLMGGTLVEA 731

Query: 196  EIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS-GIWPNVVCF 254
            E+ +     +E+V  G     +    ++  LCK  +   A  ++ +  K  GI P +  +
Sbjct: 732  EMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASY 791

Query: 255  NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
            N +I E  +V   E A  LF+ M  +      P++ T N ++    K G++    E+   
Sbjct: 792  NCLIGELLEVHYTEKAWDLFKDMKNVG---CAPDAFTFNMLLAVHGKSGKITELFELYKE 848

Query: 315  MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
            MI      +  TY  +I   A+  + ++AL    ++V     P    Y   I  L   G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 375  VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
            +E A+ +  +M D    P+   ++IL  G  + G  + A +L  +++ E +  D  SY I
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 435  LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
            L++ LC +  +  A    + +   GL PD I Y  +I+G  K   +E A+ +Y  M+   
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 495  KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
              P+L  YNS++  L     ++ AK + +  Q  GL  D  TYN LI GY ++     A+
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088

Query: 554  AMFSEMRNVGIAVNKVGYNILIN 576
             ++  M   G   N   Y  L N
Sbjct: 1089 TVYKNMMVDGCNPNIGTYAQLPN 1111



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 1/297 (0%)

Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
           N  + +L     VE    V   M  K I  D  TY  + K L   G ++Q   + N++ +
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
              V +AYSYN LI+ L +S     A ++   M+  GL P + TY  L+    K  + E 
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
            + + + M+ +  +PN+  +   I  L +   +D A  + +     G   D +TY  LI+
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305

Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
                G++  A  +F +M+  G   ++V Y  L++    FG     +E    M   G +P
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365

Query: 602 DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           D VT+T LV    K    +E     D M   G+ P+  TYN +I  LL     ED +
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Glycine max]
          Length = 1113

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 250/524 (47%), Gaps = 13/524 (2%)

Query: 142  CKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
            C  +P    ++ +++  ++ G  + A  ++ ++  +G    I   N+ +  L K   +  
Sbjct: 501  CGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDE 560

Query: 200  FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
             W+++  +        V T+N++I  L KE KL +AL L+  M +SG  PN V FN +++
Sbjct: 561  AWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLD 620

Query: 260  EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              C+   ++ ALK+F +M +M+     P+ +T+N II G  K GR  +A    Y  +K  
Sbjct: 621  CLCKNDAVDLALKMFCRMTIMNCS---PDVLTYNTIIYGLIKEGRAGYAFWF-YHQMKKF 676

Query: 320  IDCNVRTYATLIDGYARGGSSEEALRLCDEMV-KRGLMPNNVVYNSTIHWLFAEGDVEGA 378
            +  +  T  TL+ G  + G  E+A+++  E V + GL  +N V+   +  +  E ++E A
Sbjct: 677  LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEA 736

Query: 379  LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV---LEEHMVGDAYSYNIL 435
            +     ++   IC D      L + LC+      A KL ++    L  H   +  SYN L
Sbjct: 737  ISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPE--SYNCL 794

Query: 436  INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK 495
            ++ L   N   AA +L   M   G  P+I TY  L+D + K   I+   ++Y  M     
Sbjct: 795  MDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGC 854

Query: 496  KPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
            KPN++ +N II+ L K  S++ A  L  +           TY  LI G    G+  EA  
Sbjct: 855  KPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMK 914

Query: 555  MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
            +F EM +     N   YNILIN   K G    A +L K MI  GI PD  +YT LV    
Sbjct: 915  IFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLF 974

Query: 615  KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
                 ++ +   +++ L+G+ PD  +YN +I+ L   +  E+ +
Sbjct: 975  MTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEAL 1018



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 255/583 (43%), Gaps = 21/583 (3%)

Query: 73  SPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
            P  AL ++  V +     H+ E+   ++  L    R +D                + F+
Sbjct: 101 DPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVED----------------MAFV 144

Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
             L+   ++    P  +  + +A +  G    A   + K++  G  ++ +++N  +  L+
Sbjct: 145 FDLMQK-QVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLL 203

Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
           +        K+YK M+S G   ++ T++ ++ AL +       + L   M   G+ PN+ 
Sbjct: 204 QPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIY 263

Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
            + + I    + G ++ A  + +    M  +   P+ VT+  +I+  C  G+++ A+E+ 
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILK---TMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELY 320

Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
             M  +    ++ TY TL+  +   G  E   R   EM   G  P+ V Y   +  L   
Sbjct: 321 TKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKS 380

Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
           G V+ A  +L  M  + I P+  TY+ L  GL     + +A +L N +    +   AYSY
Sbjct: 381 GKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSY 440

Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
            + I+Y  K  +   A      M  RG++P I      +    + G I  A  ++ ++  
Sbjct: 441 VLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHN 500

Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
               P+ V YN ++    K   +D A  LL      G   D I  N+LI+  +  G++ E
Sbjct: 501 CGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDE 560

Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           A+ MF  ++++ +A   V YNILI  L K G   +A +L   M   G  P+ VT+  L+ 
Sbjct: 561 AWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLD 620

Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
              KN + +  +++   M +   SPD  TYN II  L+ E  A
Sbjct: 621 CLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRA 663



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 246/528 (46%), Gaps = 20/528 (3%)

Query: 140 EICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
           E  K +   + AL+ A  +   T    D++++++  G   +I+ +   +  L +   I  
Sbjct: 221 EGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDD 280

Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
            + + K M   G   +V T+ ++I ALC   KL++A  LY +M  S   P++V +  +++
Sbjct: 281 AYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMS 340

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
           +    GDLE   + + +   M  D   P+ VT+  ++   CK G+V+ A ++   M   G
Sbjct: 341 KFGNYGDLETVKRFWSE---MEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           I  N+ TY TLI G       +EAL L + M   G+ P    Y   I +    GD E AL
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
                M  + I P     +     L   G +++A  + N +    +  D+ +YN+++   
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
            K+  +  A +LL+ M+  G  PDII   +LID   K G ++ A Q++  +K ++  P +
Sbjct: 518 SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTV 577

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           V YN +I GL K+  L  A  L  + +  G   + +T+N L++    N  +  A  MF  
Sbjct: 578 VTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCR 637

Query: 559 MRNVGIAVNKVGYNILINFLCK-------FGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
           M  +  + + + YN +I  L K       F  Y Q ++ +         PD+VT  TL+ 
Sbjct: 638 MTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLS--------PDHVTLYTLLP 689

Query: 612 RFSKNCSPEEVIELHDDMV-LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
              K+   E+ I++  + V  SG+   NQ +  ++  +L E   E+ +
Sbjct: 690 GVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAI 737



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 222/508 (43%), Gaps = 40/508 (7%)

Query: 142  CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
            C      F+AL+    +  A + A  +  ++ +   S  +  +N  +  L+K    G  +
Sbjct: 608  CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAF 667

Query: 202  KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML-KSG------IWPNVV-C 253
              Y +M      ++V  + L +  + K+ ++E+A+ +    + +SG      +W  ++ C
Sbjct: 668  WFYHQMKKFLSPDHVTLYTL-LPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMEC 726

Query: 254  F--------------NMIINEACQVGDLEFAL--------------KLFRKMGVMSGDSV 285
                            ++ N  CQ  +L   L              KLF K     G   
Sbjct: 727  ILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHP 786

Query: 286  LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALR 345
             P S  +NC+++G       E A ++   M  AG   N+ TY  L+D + +    +E   
Sbjct: 787  TPES--YNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFE 844

Query: 346  LCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC 405
            L +EM+ RG  PN + +N  I  L     +  AL +  ++I     P   TY  L  GL 
Sbjct: 845  LYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLL 904

Query: 406  RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDII 465
            + G  ++A K+  ++ +     +   YNILIN   K+ N+  A  L   MI  G+ PD+ 
Sbjct: 905  KAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLK 964

Query: 466  TYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS 525
            +Y  L++     G ++ AV  +E +K     P+ V YN +INGL K   L+ A SL    
Sbjct: 965  SYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEM 1024

Query: 526  QRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
            +  G+   + TYN LI  +   G + +A  MF E++ +G+  N   YN LI    K G  
Sbjct: 1025 KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNK 1084

Query: 585  QQARELMKVMILHGIIPDYVTYTTLVTR 612
             +A  + K M++ G  P+  T+  L  +
Sbjct: 1085 DRAFSVFKKMMIVGCSPNAGTFAQLPNK 1112



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 182/388 (46%), Gaps = 4/388 (1%)

Query: 120  LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
            L+ A     + F EGL+ +  IC+    +   +   C Q  A +      +  K  G   
Sbjct: 728  LIEAEIEEAISFAEGLVCN-SICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHP 786

Query: 180  SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
            +  ++N  +  L+  N      KL+ EM + G   N+ T+NL++ A  K  +++E   LY
Sbjct: 787  TPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELY 846

Query: 240  YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
              ML  G  PN++  N+II+   +   +  AL L+ +  ++SGD   P   T+  +I G 
Sbjct: 847  NEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYE--IISGD-FSPTPCTYGPLIGGL 903

Query: 300  CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
             K GR E A +I   M       N   Y  LI+G+ + G+   A  L   M+K G+ P+ 
Sbjct: 904  LKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDL 963

Query: 360  VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
              Y   +  LF  G V+ A+    ++    + PD  +Y+++  GL ++  +++A  L ++
Sbjct: 964  KSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSE 1023

Query: 420  VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
            +    +  + Y+YN LI +   +  +  A ++   +   GL P++ TY  LI G+ K GN
Sbjct: 1024 MKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGN 1083

Query: 480  IEGAVQVYENMKKVEKKPNLVIYNSIIN 507
             + A  V++ M  V   PN   +  + N
Sbjct: 1084 KDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 236/492 (47%), Gaps = 15/492 (3%)

Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
           F+++V    ++G  + A D++  +   G    + ++N+ +    +  +I R   L  E +
Sbjct: 59  FNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI-RSACLVLESL 117

Query: 209 SCGY----VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
              Y      ++ +FN +     K   L+E       MLK    PNVV ++  I+  C+ 
Sbjct: 118 RASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCKS 176

Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
           G+L+ ALK F     M  D++ PN VT  C+I+G+CK G +E    +   M +  +  NV
Sbjct: 177 GELKLALKSF---NCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNV 233

Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
            TY  LIDG+ + G  + A  +   M++  + PN++VY + I+  F  GD + A+  L+ 
Sbjct: 234 VTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAK 293

Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
           M+++ +  D   Y ++  GLC  G +K+A ++   + +  +V D   +  ++N   KS  
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGR 353

Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
           + AA  +   +I RG  PD++   T+IDG  K G +  A+  +       +K N V+Y  
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF-----CTEKANDVMYTV 408

Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
           +I+ LCK+      + L       GL+ D   Y + I G    G + +AF + ++M   G
Sbjct: 409 LIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEG 468

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           + ++   Y  LI  L   G   +AR++   M+  G+ PD   +  L+  + K  +     
Sbjct: 469 LELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTAS 528

Query: 624 ELHDDMVLSGVS 635
           +L  DM   G++
Sbjct: 529 DLLLDMQTRGLA 540



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 228/465 (49%), Gaps = 7/465 (1%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N  +  L+  N      K    +VS GY  + ++FN V+  +CK  +++ A+ + + M +
Sbjct: 25  NKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMPR 84

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
            G  P+V+ +N +I+  C+ GD+  A  +   +    G +  P+ V+ N + NGF K+  
Sbjct: 85  FGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKM 144

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
           ++        M+K     NV TY+T ID + + G  + AL+  + M +  L PN V +  
Sbjct: 145 LDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTC 203

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
            I      GD+E  + +  +M    +  +  TY+ L  G C+ G +++A  ++ ++LE+ 
Sbjct: 204 LIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDR 263

Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
           +  ++  Y  +IN   +  +   A + L+ M+ +G+  DI  YG +I G C  G ++ A 
Sbjct: 264 VEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEAT 323

Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGY 543
           ++ E+M+K +  P+++I+ +++N   K   + AA ++       G   D +  +T+I+G 
Sbjct: 324 EIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383

Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
             NG++ EA + F   +      N V Y +LI+ LCK   + +   L   +   G++PD 
Sbjct: 384 AKNGQLHEAISYFCTEK-----ANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDK 438

Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
             YT+ +    K  +  +  +L   MV  G+  D   Y  +I  L
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGL 483



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 194/414 (46%), Gaps = 51/414 (12%)

Query: 232 LEEALSLYYRMLKSGIWPNVVCFN----MIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
           ++EAL    R+ KS   P+ V  N     +IN  C    L+F   L  +          P
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSR-------GYAP 54

Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
           +  + N +++  CKLG+V+FA +I ++M + G +                          
Sbjct: 55  HRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCE-------------------------- 88

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH--IC-PDHFTYSILTKGL 404
                    P+ + YNS I      GD+  A  VL  +   +   C PD  +++ L  G 
Sbjct: 89  ---------PDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGF 139

Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
            +   + + F ++  V+ +    +  +Y+  I+  CKS  L  A +  + M    L P++
Sbjct: 140 SKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNV 198

Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL-LQ 523
           +T+  LIDGYCK G++E  V +YE M++V    N+V Y ++I+G CK   +  A  + L+
Sbjct: 199 VTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLR 258

Query: 524 ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
             +     +++ Y T+ING+F  G    A    ++M N G+ ++   Y ++I+ LC  G 
Sbjct: 259 MLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGK 318

Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
            ++A E+++ M    ++PD + +TT++  + K+   +  + ++  ++  G  PD
Sbjct: 319 LKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 124/509 (24%), Positives = 227/509 (44%), Gaps = 46/509 (9%)

Query: 62  LVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDAL----LLM 117
           LV+R  +  R S    + F   +G+       ++ +  IVH +  +    D +    L+ 
Sbjct: 47  LVSRGYAPHRSSFNSVVSFVCKLGQ-------VKFAVDIVHSMPRFGCEPDVISYNSLID 99

Query: 118 GNLMSANSVSPLEFLEGLLDSYEI-CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
           G+  + +  S    LE L  SY   CK     F+ L    +++   +  + V   + +K 
Sbjct: 100 GHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVF-VYMGVMLKC 158

Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
            S ++  ++ ++    K  E+    K +  M       NV TF  +I   CK   LE  +
Sbjct: 159 CSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVV 218

Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
           SLY  M +  +  NVV +  +I+  C+ G+++ A  ++ +M     D V PNS+ +  II
Sbjct: 219 SLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRM---LEDRVEPNSLVYTTII 275

Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
           NGF + G  + A +    M+  G+  ++  Y  +I G    G  +EA  + ++M K  L+
Sbjct: 276 NGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLV 335

Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG-------- 408
           P+ +++ + ++  F  G ++ A+ +   +I++   PD    S +  G+ +NG        
Sbjct: 336 PDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISY 395

Query: 409 ------------------CVKQAF----KLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
                             C ++ F    +L +++ E  +V D + Y   I  LCK  NL 
Sbjct: 396 FCTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L + M+  GL  D+  Y TLI G    G +  A QV++ M +    P+  +++ +I
Sbjct: 456 DAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLI 515

Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAIT 535
               K+ ++  A  LL   Q  GL  A++
Sbjct: 516 RAYEKEGNMTTASDLLLDMQTRGLARAVS 544



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 5/314 (1%)

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
           +EAL+    + K   +P+ V  N  IH L        +L  L+ ++ +   P   +++ +
Sbjct: 3   KEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSV 62

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR-G 459
              +C+ G VK A  + + +       D  SYN LI+  C++ ++ +A  +L S+    G
Sbjct: 63  VSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYG 122

Query: 460 LI--PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
               PDI+++ TL +G+ K   ++  V VY  +      PN+V Y++ I+  CK   L  
Sbjct: 123 FTCKPDIVSFNTLFNGFSKMKMLD-EVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKL 181

Query: 518 AKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
           A       +R  L  + +T+  LI+GY   G +    +++ EMR V +++N V Y  LI+
Sbjct: 182 ALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALID 241

Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
             CK G  Q+A  +   M+   + P+ + YTT++  F +    +  ++    M+  G+  
Sbjct: 242 GFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRL 301

Query: 637 DNQTYNAIISPLLG 650
           D   Y  IIS L G
Sbjct: 302 DITAYGVIISGLCG 315



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 122/240 (50%), Gaps = 5/240 (2%)

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           VK+A +  +++ +   + D  + N  I+ L  SN  A + + L+ ++ RG  P   ++ +
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRI 528
           ++   CK G ++ AV +  +M +   +P+++ YNS+I+G C++  + +A  +L++     
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 529 GLL---DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
           G     D +++NTL NG+     + E F     M     + N V Y+  I+  CK G  +
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDMFCKSGELK 180

Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
            A +    M    + P+ VT+T L+  + K    E V+ L+++M    +S +  TY A+I
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 224/452 (49%), Gaps = 9/452 (1%)

Query: 199 RFWKLYKEMVSCGYVENVN-TFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMI 257
           R + LY+ MV    V     TF +   ALC+  + +EAL+L   M + G  P+ V +  +
Sbjct: 141 RRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTV 200

Query: 258 INEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIK 317
           I+  C  G +  A  L  +M +M   +   +  T + ++ G C LGRV  A  +   M+ 
Sbjct: 201 IHALCDQGGVTEAATLLNEMLLMGCAA---DVNTFDDVVRGMCGLGRVREAARLVDRMMT 257

Query: 318 AGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
            G    V TY  L+ G  R   ++EA      M+ R    N V++N+ I    AEG +  
Sbjct: 258 KGCMPGVMTYGFLLQGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAE 313

Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
           A  +   M  K   PD  TYSIL  GLC+ G +  A +L  ++ ++    +  +Y I+++
Sbjct: 314 ATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLH 373

Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
             CK+      + LL  M  +GL  +   Y  +I   CK G ++ A+ + + M+     P
Sbjct: 374 SFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP 433

Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
           ++  YN+II  LC +  ++ A+ + +     G++ + ITYNT+I+    +G+  +A  + 
Sbjct: 434 DICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLA 493

Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
            EM   G +++ V YN LI  +CK G   ++  L++ M   GI P+ V+Y  L++   K 
Sbjct: 494 KEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKE 553

Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
               + +EL   M+  G++PD  TYN +I+ L
Sbjct: 554 RRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 233/454 (51%), Gaps = 12/454 (2%)

Query: 129 LEFLEGLLDSYEICKATPAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
           L  L G+  +   C     ++  ++ A C Q G TE A  ++ ++ + G +  ++ +++ 
Sbjct: 179 LALLRGM--ARHGCVPDAVLYQTVIHALCDQGGVTEAA-TLLNEMLLMGCAADVNTFDDV 235

Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
           +  +  L  +    +L   M++ G +  V T+  ++  LC+  + +EA ++  R+ +   
Sbjct: 236 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL-- 293

Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
             NVV FN +I      G L  A +L+  MG+       P++ T++ +++G CKLGR+  
Sbjct: 294 --NVVLFNTVIGGCLAEGKLAEATELYETMGL---KGCQPDAHTYSILMHGLCKLGRIGS 348

Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
           A  +   M K G   NV TY  ++  + + G  ++   L +EM  +GL  N+  YN  I+
Sbjct: 349 AVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIY 408

Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
            L  +G ++ A+ ++ +M  +   PD  +Y+ +   LC N  +++A  +   +LEE +V 
Sbjct: 409 ALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVA 468

Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
           +  +YN +I+ L +      A +L   MI+ G   D+++Y  LI   CK GN++ ++ + 
Sbjct: 469 NGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL 528

Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFIN 546
           E M +   KPN V YN +I+ LCK+  +  A  L +     GL  D +TYNTLING    
Sbjct: 529 EEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKM 588

Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
           G +  A  +  ++ N  +  + + YNILI++ CK
Sbjct: 589 GWMHAALNLLEKLHNENVHPDIITYNILISWHCK 622



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 214/457 (46%), Gaps = 8/457 (1%)

Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
           L +L        L + M   G V +   +  VI+ALC +  + EA +L   ML  G   +
Sbjct: 169 LCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAAD 228

Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
           V  F+ ++   C +G +  A +L  +M        +P  +T+  ++ G C   RV  A+E
Sbjct: 229 VNTFDDVVRGMCGLGRVREAARLVDRMMT---KGCMPGVMTYGFLLQGLC---RVRQADE 282

Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
            R AM+    + NV  + T+I G    G   EA  L + M  +G  P+   Y+  +H L 
Sbjct: 283 AR-AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 341

Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
             G +  A+ +L +M  K   P+  TY+I+    C+NG       L  ++  + +  ++ 
Sbjct: 342 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 401

Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
            YN +I  LCK   +  A  L+  M  +G  PDI +Y T+I   C    +E A  ++EN+
Sbjct: 402 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 461

Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKI 549
            +     N + YN+II+ L +D     A  L +     G  LD ++YN LI     +G +
Sbjct: 462 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 521

Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
             +  +  EM   GI  N V YNILI+ LCK    + A EL K M+  G+ PD VTY TL
Sbjct: 522 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 581

Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           +    K       + L + +    V PD  TYN +IS
Sbjct: 582 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 206/424 (48%), Gaps = 9/424 (2%)

Query: 237 SLYYRML-KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
           +LY RM+ +  + P    F +     C++G  + AL L R M   +    +P++V +  +
Sbjct: 144 ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGM---ARHGCVPDAVLYQTV 200

Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
           I+  C  G V  A  +   M+  G   +V T+  ++ G    G   EA RL D M+ +G 
Sbjct: 201 IHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGC 260

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           MP  + Y   +  L      + A  +L  + + ++      ++ +  G    G + +A +
Sbjct: 261 MPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV----VLFNTVIGGCLAEGKLAEATE 316

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           L+  +  +    DA++Y+IL++ LCK   + +A +LL  M  +G  P+++TY  ++  +C
Sbjct: 317 LYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFC 376

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
           K G  +    + E M       N   YN +I  LCKD  +D A  L+Q  +  G   D  
Sbjct: 377 KNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDIC 436

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           +YNT+I     N ++ EA  MF  +   G+  N + YN +I+ L + G +Q A  L K M
Sbjct: 437 SYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 496

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
           ILHG   D V+Y  L+    K+ + +  + L ++M   G+ P+N +YN +IS L  E+  
Sbjct: 497 ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV 556

Query: 655 EDQV 658
            D +
Sbjct: 557 RDAL 560



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 198/412 (48%), Gaps = 34/412 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE----- 196
           C A    FD +VR    +G    A  ++ ++  KG    +  +   L  L ++ +     
Sbjct: 225 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 284

Query: 197 --IGRF------------------------WKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
             +GR                          +LY+ M   G   + +T++++++ LCK  
Sbjct: 285 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLG 344

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
           ++  A+ L   M K G  PNVV + ++++  C+ G  +    L  +M   S   +  NS 
Sbjct: 345 RIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM---SAKGLTLNSQ 401

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
            +N +I   CK GR++ A  +   M   G + ++ +Y T+I         EEA  + + +
Sbjct: 402 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 461

Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
           ++ G++ N + YN+ IH L  +G  + A+ +  +MI      D  +Y+ L K +C++G V
Sbjct: 462 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 521

Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
            ++  L  ++ E+ +  +  SYNILI+ LCK   +  A +L   M+ +GL PDI+TY TL
Sbjct: 522 DRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 581

Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
           I+G CK G +  A+ + E +      P+++ YN +I+  CK   LD A  LL
Sbjct: 582 INGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 38/345 (11%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
           +F+ ++  C   G    A ++ + + +KG     H ++  +  L KL  IG   +L +EM
Sbjct: 297 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 356

Query: 208 VSCGYVENVNTFNLV-----------------------------------IYALCKECKL 232
              G+  NV T+ +V                                   IYALCK+ ++
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 416

Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
           +EA+ L   M   G  P++  +N II   C    +E A  +F  +     + V+ N +T+
Sbjct: 417 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL---LEEGVVANGITY 473

Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
           N II+   + GR + A  +   MI  G   +V +Y  LI    + G+ + +L L +EM +
Sbjct: 474 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 533

Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
           +G+ PNNV YN  I  L  E  V  AL +   M+++ + PD  TY+ L  GLC+ G +  
Sbjct: 534 KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHA 593

Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIV 457
           A  L  ++  E++  D  +YNILI++ CK   L  A  LL+  + 
Sbjct: 594 ALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 638



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 86/177 (48%), Gaps = 17/177 (9%)

Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
           I+H L+   R+ DA+ L   ++          L G       C      ++ L++A  + 
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMI----------LHG-------CSLDVVSYNGLIKAMCKD 518

Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
           G  + +  +++++  KG   +  ++N  +S L K   +    +L K+M++ G   ++ T+
Sbjct: 519 GNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTY 578

Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
           N +I  LCK   +  AL+L  ++    + P+++ +N++I+  C+V  L+ A  L  +
Sbjct: 579 NTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 635


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/575 (27%), Positives = 255/575 (44%), Gaps = 61/575 (10%)

Query: 144 ATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS--IHAWNNFLSHLVKLNEIGRFW 201
           A P++  ++VR   Q+G  + A    + L+ +  S+S  +  +N  L   ++ +  G   
Sbjct: 77  AHPSLI-SMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVS 135

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            LY +M++        TFNL+I++LC+    + AL L+ +M + G  PN     +++   
Sbjct: 136 WLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGL 195

Query: 262 CQVGDLEFALKLF-------------------------------RKMGVMSGDSVLPNSV 290
           C+ G ++ AL+L                                R +  M+   VLP+ V
Sbjct: 196 CRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVV 255

Query: 291 THNCIINGFCKLGRVEFAEEI-RYAMIKAGIDC---NVRTYATLIDGYARGGSSEEALRL 346
           T N  I+  C+ G+V  A  I R   + A +     NV T+  ++ G+ + G   +A  L
Sbjct: 256 TFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGL 315

Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
            + M K G   +   YN  +  L   G++  A  VL +M+ K I P+ +TY+I+  GLCR
Sbjct: 316 VETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCR 375

Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
           N  +  A  L + ++   +  D  +Y+ L++  C    +  AK +L  MI  G  P+  T
Sbjct: 376 NHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYT 435

Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
             TL+    K G    A ++ + M +   +P+ V  N ++NGLC++  LD A  ++    
Sbjct: 436 CNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMW 495

Query: 527 RIG-----------------------LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
             G                       L D ITY TLING    G++ EA   F EM    
Sbjct: 496 TNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKN 555

Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
           +  + V Y+  I   CK G    A  ++K M  +G      TY  L+     N    E+ 
Sbjct: 556 LRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIY 615

Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            L D+M   G+SPD  TYN II+ L     A+D +
Sbjct: 616 GLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAI 650



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 125/542 (23%), Positives = 236/542 (43%), Gaps = 32/542 (5%)

Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQ 170
           AL   G +M A+ +    F +  +D+ E+    P V  F+ +++   + G    A  +++
Sbjct: 263 ALCRAGKVMEASRI----FRDMQMDA-ELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVE 317

Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
            +K  G+  S+  +N +L  L++  E+     +  EMV+ G   N  T+N+++  LC+  
Sbjct: 318 TMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNH 377

Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
            L +A  L   M+++G++P+ V ++ +++  C  G +  A  +  +M + +G    PN+ 
Sbjct: 378 MLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEM-IRNG--CQPNTY 434

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T N +++   K GR   AEE+   M +     +  T   +++G  R G  ++A  +  EM
Sbjct: 435 TCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM 494

Query: 351 VKRG----------------------LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
              G                       +P+ + Y + I+ L   G +E A     +M+ K
Sbjct: 495 WTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAK 554

Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
           ++ PD  TY       C+ G +  AF++   +          +YN LI  L  +N +   
Sbjct: 555 NLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEI 614

Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
             L   M  +G+ PDI TY  +I   C+GG  + A+ +   M      PN+  +  +I  
Sbjct: 615 YGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKA 674

Query: 509 LCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
             K +    A  L + +  I       Y+ + N     G+++EA  +F    +  + +  
Sbjct: 675 FSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKN 734

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
             Y  LI  LC+      A  L+  +I  G   D+ ++  ++   SK  +  +  EL   
Sbjct: 735 FMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKR 794

Query: 629 MV 630
           M+
Sbjct: 795 MM 796



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 167/403 (41%), Gaps = 59/403 (14%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            +  L+      G    A  V+ ++   G   + +  N  L  L K        ++ ++M
Sbjct: 400 AYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKM 459

Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG--------------------- 246
               Y  +  T N+V+  LC+  +L++A  +   M  +G                     
Sbjct: 460 NEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVS 519

Query: 247 -IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
              P+ + +  +IN  C+VG LE A K F +M      ++ P+SVT++  I  FCK G++
Sbjct: 520 NCLPDGITYTTLINGLCKVGRLEEAKKKFIEM---LAKNLRPDSVTYDTFIWSFCKQGKI 576

Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
             A  +   M + G    ++TY  LI G        E   L DEM ++G+ P+   YN+ 
Sbjct: 577 SSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNI 636

Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN------------------ 407
           I  L   G  + A+ +L +M+DK I P+  ++ IL K   ++                  
Sbjct: 637 ITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICG 696

Query: 408 ----------------GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
                           G + +A +L    L+ ++    + Y  LI  LC+   LA A  L
Sbjct: 697 RKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSL 756

Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
           L  +I +G   D  ++  +IDG  K GN   A ++ + M ++E
Sbjct: 757 LYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELE 799


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/493 (30%), Positives = 227/493 (46%), Gaps = 42/493 (8%)

Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS--CGYVENVNTFNLVIYALCKECKLE 233
           G   SI  +N  L   +K     +   L KEM +   G + N  T+N+VI  L ++  LE
Sbjct: 199 GIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLE 258

Query: 234 EA----------------------------------LSLYYRMLKSGIWPNVVCFNMIIN 259
           EA                                    L   M   GI P VV +N +I+
Sbjct: 259 EAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 318

Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
              Q G +E A   F +M  M    +LP+ +T+N ++NG+CK G ++ A  +   + +AG
Sbjct: 319 GLLQSGLVEAAQVKFAEMRAMG---LLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 375

Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
           +   V TY   IDGY R G  EEA  L +EM ++G +PN   Y   +        +  A 
Sbjct: 376 LAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAR 435

Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
               +M+ K + PD F Y+         G + +A +L   ++ E +  D  +YNILI+ L
Sbjct: 436 EFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGL 495

Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
           CK+ NL  AK+L   M+  GL PD ITY  LI  +C+ G +  A +++ NM      P+ 
Sbjct: 496 CKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSA 555

Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
           V +  II+  C+  +L +A    +     G+  + ITYN LI+     G+   A   F E
Sbjct: 556 VTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHE 615

Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
           M   G+  NK  Y +LI+  CK G ++ A      M  +GI PDY+T+  LV  F  +  
Sbjct: 616 MLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGFDGHV- 674

Query: 619 PEEVIELHDDMVL 631
               IE  D ++L
Sbjct: 675 -HHTIEYLDIVIL 686



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 255/544 (46%), Gaps = 45/544 (8%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           CKA  A  D     C             +++   G +  +   N+ L  L          
Sbjct: 139 CKARDATLDTCSTLC---------LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDIC 189

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM--LKSGIWPNVVCFNMIIN 259
            +++EM+  G   ++ T+N ++ +  KE + ++   L   M    SG  PN V +N++I 
Sbjct: 190 AVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVIT 249

Query: 260 EACQVGDLEFALKLFRKMGV-------------------------------MSGDSVLPN 288
              + GDLE A +L   M +                               M  + ++P 
Sbjct: 250 GLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPT 309

Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKA-GIDCNVRTYATLIDGYARGGSSEEALRLC 347
            VT+N +I+G  + G VE A ++++A ++A G+  +V TY +L++GY + G+ +EAL L 
Sbjct: 310 VVTYNAMIHGLLQSGLVE-AAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLF 368

Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
            ++ + GL P  + YN  I      GD+E A  +  +M ++   P+  TY+IL KG    
Sbjct: 369 GDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNV 428

Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
             +  A +  +++L + +  D ++YN  I       ++A A +L   +++ G+  D +TY
Sbjct: 429 CSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTY 488

Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
             LI G CK GN++ A ++   M     +P+ + Y  +I+  C+   L  A+ +      
Sbjct: 489 NILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMIS 548

Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
            GLL  A+T+  +I+ Y   G +  A+  F +M   G+  N++ YN+LI+ LC+ G  Q 
Sbjct: 549 DGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQL 608

Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           A      M+  G++ +  TYT L+    K  + E+ +  + +M  +G+ PD  T+ A++ 
Sbjct: 609 ASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVK 668

Query: 647 PLLG 650
              G
Sbjct: 669 GFDG 672


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 185/368 (50%), Gaps = 2/368 (0%)

Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
           T+N ++ G C  G+++ A  +R  M    +  +V TY TLIDG  +   S E  RL +EM
Sbjct: 139 TYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEM 198

Query: 351 VKR-GLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
             R G+ PN V +N  + W   EG +  A   +  M++  + PD FTY+ +  G C+ G 
Sbjct: 199 KSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGK 258

Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
           + +AF++ +++  + +  D  + N +++ LC       A +L      RG I D +TYGT
Sbjct: 259 LGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGT 318

Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
           LI GY KG   + A++++E MKK    P++V YN +I GLC     D A   L      G
Sbjct: 319 LIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKG 378

Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
           L+ D ++ N +I+GY   G + +AF   ++M       +    NIL+  LC+    ++A 
Sbjct: 379 LVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAF 438

Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
           +L    I      D VTY T+++   K    +E  +L  DM +    PD  TYNAI+  L
Sbjct: 439 KLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRAL 498

Query: 649 LGEKSAED 656
                 E+
Sbjct: 499 THAGRTEE 506



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 218/447 (48%), Gaps = 17/447 (3%)

Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
            ++ LV+     G  + A  V  +++       +  +N  +    K       ++L +EM
Sbjct: 139 TYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEM 198

Query: 208 VSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
            S G VE N  T N+++    KE K+ EA     +M++SG+ P+   +N +IN  C+ G 
Sbjct: 199 KSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGK 258

Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
           L  A   FR M  M+   + P+  T N +++  C   + E A E+     K G   +  T
Sbjct: 259 LGEA---FRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
           Y TLI GY +G   ++AL+L +EM KRG++P+ V YN  I  L   G  + A+  L++++
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
           +K + PD  + +I+  G C  G V +AF+ HN+++      D ++ NIL+  LC+ + L 
Sbjct: 376 EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLE 435

Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
            A +L +S I +    D++TY T+I   CK G ++ A  +  +M+  + +P+   YN+I+
Sbjct: 436 KAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIV 495

Query: 507 NGLCKDASLDAAKSLL-------------QASQRIGLLDAITYNTLINGYFINGKIAEAF 553
             L      + A+  +               SQ +     I Y+  I+     GK  EA 
Sbjct: 496 RALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAM 555

Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCK 580
            +F E    G+++NK  Y  L++   K
Sbjct: 556 KLFQESEQKGVSLNKYTYIKLMDGFLK 582



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 217/457 (47%), Gaps = 15/457 (3%)

Query: 215 NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLF 274
           +V T+N ++  LC E K++EA+ +   M    + P+VV +N +I+   +        +L 
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 275 RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGY 334
            +M    G  V PN+VTHN ++  F K G++  A +    M+++G+  +  TY T+I+G+
Sbjct: 196 EEMKSRGG--VEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253

Query: 335 ARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDH 394
            + G   EA R+ DEM ++GL P+    N+ +H L  E   E A  +      +    D 
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDE 313

Query: 395 FTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSS 454
            TY  L  G  +     +A KL  ++ +  +V    SYN LI  LC S     A   L+ 
Sbjct: 314 VTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNE 373

Query: 455 MIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDAS 514
           ++ +GL+PD ++   +I GYC  G ++ A Q +  M     KP++   N ++ GLC+   
Sbjct: 374 LLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDM 433

Query: 515 LDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNI 573
           L+ A  L  +   +   +D +TYNT+I+     G++ EAF + ++M       ++  YN 
Sbjct: 434 LEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNA 493

Query: 574 LINFLCKFGCYQQARELM-------KVMILHGIIPDY-----VTYTTLVTRFSKNCSPEE 621
           ++  L   G  ++A + M       + +  H    +      + Y+  ++        +E
Sbjct: 494 IVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKE 553

Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
            ++L  +    GVS +  TY  ++   L  + +  +V
Sbjct: 554 AMKLFQESEQKGVSLNKYTYIKLMDGFLKRRKSISKV 590



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 1/117 (0%)

Query: 531 LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF-GCYQQARE 589
           +D  TYNTL+ G    GKI EA  +  EM ++ +  + V YN LI+   K+ G  +  R 
Sbjct: 135 IDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRL 194

Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
           L ++    G+ P+ VT+  +V  F K     E  +    MV SGVSPD  TYN +I+
Sbjct: 195 LEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMIN 251


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 216/438 (49%), Gaps = 11/438 (2%)

Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
           C+     ++A+V      G  + A  ++  + ++  S   + +N  +  L      G   
Sbjct: 120 CEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDS---YTYNTLIRGLCGRGRTGNAL 176

Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
            +  +M+  G V +V T+ +++ A CK    ++A+ L   M   G  P+++ +N+++N  
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236

Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
           CQ G ++ A++  + +         PN+V++N ++ G C   R E AE++   M + G  
Sbjct: 237 CQEGRVDDAIEFLKSL---PSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP 293

Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
            NV T+  LI    R G  E A+ + D++ K G  PN++ YN  +H    +  ++ A+  
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353

Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
           +  M+ +   PD  +Y+ L   LCR G V  A +L +Q+ ++       SYN +I+ L K
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413

Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
           +     A +LL+ M+ +GL PDIITY T+  G C+   IE A++ +  ++ +  +PN V+
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473

Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMR 560
           YN+I+ GLCK      A  L       G + +  TY  LI G    G + EA  +  E+ 
Sbjct: 474 YNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELC 533

Query: 561 NVGIA----VNKVGYNIL 574
           + G+     +NK    +L
Sbjct: 534 SRGVVSKGLINKAAIRLL 551



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 223/486 (45%), Gaps = 47/486 (9%)

Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
           N+ L  LV+  ++    +L + M              +I  LC   +  EA     R + 
Sbjct: 63  NDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEA-----RRVL 117

Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
           +   P+V+ +N ++   C  G L+ A +L   M       + P+S T+N +I G C  GR
Sbjct: 118 AACEPDVMAYNAMVAGYCVTGQLDAARRLVADM------PMEPDSYTYNTLIRGLCGRGR 171

Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
              A  +   M++ G   +V TY  L++   +    ++A++L DEM  +G  P+ + YN 
Sbjct: 172 TGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNV 231

Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLC------------------- 405
            ++ +  EG V+ A+  L  +      P+  +Y+I+ KGLC                   
Sbjct: 232 VVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKG 291

Query: 406 ----------------RNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
                           R G V+ A ++ +Q+ +     ++ SYN +++  CK   +  A 
Sbjct: 292 YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 351

Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
             +  M+ RG  PDI++Y TL+   C+GG ++ AV++   +K     P L+ YN++I+GL
Sbjct: 352 AFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411

Query: 510 CKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
            K      A  LL      GL  D ITY+T+ +G     +I EA   F +++++GI  N 
Sbjct: 412 TKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNT 471

Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
           V YN ++  LCK      A +L   MI +G +P+  TYT L+   +     +E  EL  +
Sbjct: 472 VLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGE 531

Query: 629 MVLSGV 634
           +   GV
Sbjct: 532 LCSRGV 537



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 208/426 (48%), Gaps = 16/426 (3%)

Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFN--MIINEACQVGDLEFALKLFRKMGVM 280
           +  L +   LEEAL L   M  SG+ P+        +I + C  G    A ++       
Sbjct: 66  LRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVLA----- 118

Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
              +  P+ + +N ++ G+C  G+++ A  +   M    ++ +  TY TLI G    G +
Sbjct: 119 ---ACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRT 172

Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
             AL + D+M++RG +P+ V Y   +         + A+ +L +M  K   PD  TY+++
Sbjct: 173 GNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVV 232

Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
             G+C+ G V  A +    +       +  SYNI++  LC +     A++L++ M  +G 
Sbjct: 233 VNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGY 292

Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
            P+++T+  LI   C+ G +E A++V + + K    PN + YN I++  CK   +D A +
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 352

Query: 521 LLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
            ++     G   D ++YNTL+      G++  A  +  ++++ G     + YN +I+ L 
Sbjct: 353 FVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLT 412

Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
           K G  ++A EL+  M+  G+ PD +TY+T+ +   +    EE I     +   G+ P+  
Sbjct: 413 KAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTV 472

Query: 640 TYNAII 645
            YNAI+
Sbjct: 473 LYNAIL 478



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 174/394 (44%), Gaps = 69/394 (17%)

Query: 331 IDGYARGGSSEEALRL---------------CDEMVKR---------------GLMPNNV 360
           + G  R G  EEALRL               C  ++K+                  P+ +
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVM 125

Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
            YN+ +      G ++ A  +++DM    + PD +TY+ L +GLC  G    A  + + +
Sbjct: 126 AYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDM 182

Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
           L    V D  +Y IL+   CK +    A +LL  M  +G  PDIITY  +++G C+ G +
Sbjct: 183 LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRV 242

Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTL 539
           + A++  +++     +PN V YN ++ GLC      DA K + + SQ+    + +T+N L
Sbjct: 243 DDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNML 302

Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGI 599
           I+     G +  A  +  ++   G   N + YN +++  CK     +A   +++M+  G 
Sbjct: 303 ISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGC 362

Query: 600 IPDYVTYTTLVTRF-----------------SKNCSP------------------EEVIE 624
            PD V+Y TL+T                    K C+P                  +E +E
Sbjct: 363 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALE 422

Query: 625 LHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
           L ++MV  G+ PD  TY+ I S L  E   E+ +
Sbjct: 423 LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAI 456



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 9/301 (2%)

Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
           +P+  V N  +  L   GD+E AL ++  M            + L K LC +G   +A +
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARR 115

Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
           +           D  +YN ++   C +  L AA++L++ M +    PD  TY TLI G C
Sbjct: 116 VLAACEP-----DVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLC 167

Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
             G    A+ V ++M +    P++V Y  ++   CK +    A  LL   +  G   D I
Sbjct: 168 GRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227

Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
           TYN ++NG    G++ +A      + + G   N V YNI++  LC    ++ A +LM  M
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287

Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
              G  P+ VT+  L++   +    E  +E+ D +   G +P++ +YN I+     +K  
Sbjct: 288 SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKM 347

Query: 655 E 655
           +
Sbjct: 348 D 348


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.137    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,899,338,816
Number of Sequences: 23463169
Number of extensions: 403208751
Number of successful extensions: 1189462
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7041
Number of HSP's successfully gapped in prelim test: 5225
Number of HSP's that attempted gapping in prelim test: 897659
Number of HSP's gapped (non-prelim): 85175
length of query: 658
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 509
effective length of database: 8,863,183,186
effective search space: 4511360241674
effective search space used: 4511360241674
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)