BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006154
(658 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAA6|PPR34_ARATH Pentatricopeptide repeat-containing protein At1g11710,
mitochondrial OS=Arabidopsis thaliana GN=At1g11710 PE=2
SV=1
Length = 657
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/658 (52%), Positives = 472/658 (71%), Gaps = 10/658 (1%)
Query: 5 FCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN 64
F + + S L R FHV K+F+NP EDI+F A+C+NLRQR+W L Q + SLTN L++
Sbjct: 2 FGHVFSRRTSFLVRCFHVAKKFSNPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLIS 61
Query: 65 RVVSEFRKSPKLALEFYTWVGENNRFSHS---LESSCAIVHLLVNWRRFDDALLLMGNLM 121
RV+ EFR SPKLALEFY WV +N + S E+SC ++HLLV RRFDDAL +M NLM
Sbjct: 62 RVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLM 121
Query: 122 S--ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
S +SPL L GL+ SY+ C ++P VFD+LVRACTQ G +GAY+VI++ + +G V
Sbjct: 122 SVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCV 181
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
S+HA NNF+ L+ +NEI RFWK+YKEM S GYVENVNTFNLVIY+ CKE KL EALS++
Sbjct: 182 SVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVF 241
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
YRMLK G+WPNVV FNM+I+ AC+ GD+ FAL+L KMG+MSG+ V PN+VT+N +INGF
Sbjct: 242 YRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGF 301
Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
CK GR++ AE IR M+K+G+DCN RTY L+D Y R GSS+EALRLCDEM +GL+ N
Sbjct: 302 CKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNT 361
Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
V+YNS ++WLF EGD+EGA+ VL DM K++ D FT +I+ +GLCRNG VK+A + Q
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421
Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
+ E+ +V D +N L+++ + LA A Q+L SM+V+GL D I++GTLIDGY K G
Sbjct: 422 ISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTL 539
+E A+++Y+ M K+ K NLVIYNSI+NGL K AA++++ A + + D +TYNTL
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME---IKDIVTYNTL 538
Query: 540 INGYFINGKIAEAFAMFSEMRNVG--IAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
+N G + EA + S+M+ +V+ V +NI+IN LCKFG Y++A+E++K M+
Sbjct: 539 LNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVER 598
Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
G++PD +TY TL+T FSK+ S E+V+ELHD ++L GV+P Y +I+ PLL ++
Sbjct: 599 GVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDRENGR 656
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 170/560 (30%), Positives = 298/560 (53%), Gaps = 8/560 (1%)
Query: 90 FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
F H+ S A++H+LV R DA + ++ + VS LE + L ++ C + +VF
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
D L+R Q A++ L+ KG +VSI A N + LV++ + W +Y+E+
Sbjct: 169 DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
G NV T N+++ ALCK+ K+E+ + ++ + G++P++V +N +I+ G +E
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
A +L M M G P T+N +ING CK G+ E A+E+ M+++G+ + TY +
Sbjct: 289 AFEL---MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
L+ + G E ++ +M R ++P+ V ++S + G+++ AL + + +
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
+ PD+ Y+IL +G CR G + A L N++L++ D +YN +++ LCK L A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
+L + M R L PD T LIDG+CK GN++ A+++++ MK+ + ++V YN++++G
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 510 CKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
K +D AK + S+ I L I+Y+ L+N G +AEAF ++ EM + I
Sbjct: 526 GKVGDIDTAKEIWADMVSKEI-LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
+ N +I C+ G ++ MI G +PD ++Y TL+ F + + + L
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 628 DM--VLSGVSPDNQTYNAII 645
M G+ PD TYN+I+
Sbjct: 645 KMEEEQGGLVPDVFTYNSIL 664
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 213/449 (47%), Gaps = 6/449 (1%)
Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
+CG N + F+L+I + KL EA + + G ++ N +I ++G +E
Sbjct: 160 NCG--SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVE 217
Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
A +++++ S V N T N ++N CK G++E + + G+ ++ TY
Sbjct: 218 LAWGVYQEI---SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
TLI Y+ G EEA L + M +G P YN+ I+ L G E A V ++M+
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
+ PD TY L C+ G V + K+ + + +V D ++ +++ +S NL A
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
+S+ GLIPD + Y LI GYC+ G I A+ + M + ++V YN+I++G
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 509 LCKDASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
LCK L A L + ++R D+ T LI+G+ G + A +F +M+ I ++
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
V YN L++ K G A+E+ M+ I+P ++Y+ LV E + D
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 628 DMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+M+ + P N++I +A D
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASD 603
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 242/501 (48%), Gaps = 44/501 (8%)
Query: 185 NNFLSHLVKLNEIGRFWKLYK--EMVSCG--YVENVN-----------TFNLVIYALCKE 229
NN +HL++LN + LY+ ++ G +V+ + + + +I+ L +
Sbjct: 67 NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRS 126
Query: 230 CKLEEALSLYYRMLK-SGI----------------WPNVVCFNMIIN---EACQVGDLEF 269
+L +A S RM++ SG+ N F+++I +A ++ +
Sbjct: 127 GRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHE 186
Query: 270 ALKLFRKMG-VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
A L R G +S D+ N +I ++G VE A + + ++G+ NV T
Sbjct: 187 AFTLLRSKGFTVSIDAC-------NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239
Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
+++ + G E+ ++ ++G+ P+ V YN+ I ++G +E A +++ M K
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299
Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
P +TY+ + GLC++G ++A ++ ++L + D+ +Y L+ CK ++
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
+++ S M R ++PD++ + +++ + + GN++ A+ + ++K+ P+ VIY +I G
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 509 LCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
C+ + A +L + G +D +TYNT+++G + EA +F+EM + +
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 568 KVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
ILI+ CK G Q A EL + M I D VTY TL+ F K + E+
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 628 DMVLSGVSPDNQTYNAIISPL 648
DMV + P +Y+ +++ L
Sbjct: 540 DMVSKEILPTPISYSILVNAL 560
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 158/298 (53%), Gaps = 5/298 (1%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L EM+ G +V T+N +++ LCK L EA L+ M + ++P+ ++I+ C
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
++G+L+ A++LF+KM + + VT+N +++GF K+G ++ A+EI M+ I
Sbjct: 492 KLGNLQNAMELFQKM---KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+Y+ L++ G EA R+ DEM+ + + P ++ NS I G+ L
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH--MVGDAYSYNILINYLC 440
MI + PD +Y+ L G R + +AF L ++ EE +V D ++YN +++ C
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFC 668
Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
+ N + A+ +L MI RG+ PD TY +I+G+ N+ A ++++ M + P+
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 115/243 (47%), Gaps = 36/243 (14%)
Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
L+ ++G + A ++ QK+K K + + +N L K+ +I +++ +MVS
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD----- 266
+ ++++++ ALC + L EA ++ M+ I P V+ N +I C+ G+
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 267 ------------------------------LEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
+ A L +KM G ++P+ T+N I+
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG-GLVPDVFTYNSIL 664
Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
+GFC+ +++ AE + MI+ G++ + TY +I+G+ + EA R+ DEM++RG
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 357 PNN 359
P++
Sbjct: 725 PDD 727
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 297/589 (50%), Gaps = 17/589 (2%)
Query: 29 PSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENN 88
P T +I+ +I R +W I+E +A LT SLV+ + K+P LA F + +
Sbjct: 44 PITSEILLESI----RSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHI---D 96
Query: 89 RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA--NSVSPLEFLEGLLDSYEICKATP 146
+ ++ C + ++ L+ ++++ NS+ L F E +L + +
Sbjct: 97 LYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNL-FDELVLAHDRLETKST 155
Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
+FD LVR C Q+ + A + +K KG N+ L+ L +LN I W Y +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
M NV TFN++I LCKE KL++A M GI P +V +N ++ G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
+E A + +M P+ T+N I++ C GR A E+ M + G+ + +
Sbjct: 276 IEGARLIISEM---KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVS 329
Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
Y LI G + G E A DEMVK+G++P YN+ IH LF E +E A ++ ++
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
+K I D TY+IL G C++G K+AF LH++++ + + ++Y LI LC+ N
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
A +L ++ +G+ PD++ TL+DG+C GN++ A + + M + P+ V YN ++
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
GLC + + A+ L+ +R G+ D I+YNTLI+GY G AF + EM ++G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
+ YN L+ L K + A EL++ M GI+P+ ++ +++ S
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 227/438 (51%), Gaps = 7/438 (1%)
Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
F+L++ C+ ++EA+ +Y M + G +P N I+ ++ +E A + M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
M S N T N +IN CK G+++ A+ M GI + TY TL+ G++ G
Sbjct: 218 RMEIKS---NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
E A + EM +G P+ YN + W+ EG A VL +M + + PD +Y+
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYN 331
Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
IL +G NG ++ AF ++++++ MV Y+YN LI+ L N + AA+ L+ + +
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
G++ D +TY LI+GYC+ G+ + A +++ M +P Y S+I LC+ A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 519 KSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
L + G+ D + NTL++G+ G + AF++ EM + I + V YN L+
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
LC G +++ARELM M GI PD+++Y TL++ +SK + + D+M+ G +P
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 638 NQTYNAIISPLLGEKSAE 655
TYNA++ L + E
Sbjct: 572 LLTYNALLKGLSKNQEGE 589
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 189/408 (46%), Gaps = 42/408 (10%)
Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
+ + F++++ CQ+ ++ A++ F +M P + T N I+ +L R+E A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFY---LMKEKGFYPKTETCNHILTLLSRLNRIENAW 210
Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
M + I NV T+ +I+ + G ++A M G+ P V YN+ +
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
G +EGA ++S+M K P D
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQP-----------------------------------DM 295
Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
+YN +++++C N A ++L M GL+PD ++Y LI G G++E A +
Sbjct: 296 QTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
M K P YN++I+GL + ++AA+ L++ + G+ LD++TYN LINGY +G
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
+AFA+ EM GI + Y LI LC+ ++A EL + ++ G+ PD V T
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
L+ + + L +M + ++PD+ TYN ++ L GE E+
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/591 (28%), Positives = 293/591 (49%), Gaps = 7/591 (1%)
Query: 57 SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
+L V RV+ E ++ PKLA +F+ W N F HS+ES C + H+L R + DA +
Sbjct: 105 TLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSV 164
Query: 117 MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
+ ++ S + + + L + +C VFDAL +G E A K+K
Sbjct: 165 LKEMVL--SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR 222
Query: 177 HSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
+ N L KL + + +K+M+ G V T+N++I +CKE +E A
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
L+ M G+ P+ V +N +I+ +VG L+ + F +M M + P+ +T+N +I
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE---PDVITYNALI 339
Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
N FCK G++ E M G+ NV +Y+TL+D + + G ++A++ +M + GL+
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
PN Y S I G++ A + ++M+ + + TY+ L GLC +K+A +L
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
++ ++ + SYN LI+ K+ N+ A +LL+ + RG+ PD++ YGT I G C
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAIT 535
IE A V MK+ K N +IY ++++ K + LL + + + + +T
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 536 YNTLINGYFINGKIAEAFAMFSEMRN-VGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
+ LI+G N +++A F+ + N G+ N + +I+ LCK + A L + M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+ G++PD YT+L+ K + E + L D M G+ D Y +++
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 240/487 (49%), Gaps = 7/487 (1%)
Query: 144 ATPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
A P VF + ++ + G E A + +++K +G +N+ + K+ +
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
++EM +V T+N +I CK KL L Y M +G+ PNVV ++ +++
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
C+ G ++ A+K + M + ++PN T+ +I+ CK+G + A + M++ G++
Sbjct: 378 CKEGMMQQAIKFYVDMRRVG---LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
NV TY LIDG +EA L +M G++PN YN+ IH +++ AL +
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
L+++ + I PD Y GLC ++ A + N++ E + ++ Y L++ K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK-KVEKKPNLV 500
S N LL M + ++T+ LIDG CK + AV + + + N
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEM 559
I+ ++I+GLCKD ++AA +L + + GL+ D Y +L++G F G + EA A+ +M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
+G+ ++ + Y L+ L Q+AR ++ MI GI PD V +++ + +
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 734
Query: 620 EEVIELH 626
+E +EL
Sbjct: 735 DEAVELQ 741
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 204/433 (47%), Gaps = 41/433 (9%)
Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
+E GL + + P +++++ ++G + +++K + +N
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 187 FLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSG 246
++ K ++ + Y+EM G NV +++ ++ A CKE +++A+ Y M + G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 247 IWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVE 306
+ PN + +I+ C++G+L A +L +M + V N VT+ +I+G C R++
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG---VEWNVVTYTALIDGLCDAERMK 454
Query: 307 FAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP--------- 357
AEE+ M AG+ N+ +Y LI G+ + + + AL L +E+ RG+ P
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 358 --------------------------NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
N+++Y + + F G+ L +L +M + I
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH-MVGDAYSYNILINYLCKSNNLAAAKQ 450
T+ +L GLC+N V +A N++ + + +A + +I+ LCK N + AA
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
L M+ +GL+PD Y +L+DG K GN+ A+ + + M ++ K +L+ Y S++ GL
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 511 KDASLDAAKSLLQ 523
L A+S L+
Sbjct: 695 HCNQLQKARSFLE 707
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 148/301 (49%), Gaps = 1/301 (0%)
Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
+P V+++ L G +E A+ S M + P + + L + G +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
++ ++YNI+I+ +CK ++ AA+ L M RGL+PD +TY ++IDG+
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
K G ++ V +E MK + +P+++ YN++IN CK L + + GL + +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
+Y+TL++ + G + +A + +MR VG+ N+ Y LI+ CK G A L M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
+ G+ + VTYT L+ +E EL M +GV P+ +YNA+I + K+
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 655 E 655
+
Sbjct: 489 D 489
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 388 KHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
+++C P + L L G +++A + +++ + S N L++ K
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
K+ MI G P + TY +ID CK G++E A ++E MK P+ V YNS+I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 507 NGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
+G K LD + + + D ITYN LIN + GK+ + EM+ G+
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
N V Y+ L++ CK G QQA + M G++P+ TYT+L+ K + + L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 626 HDDMVLSGVSPDNQTYNAIISPL 648
++M+ GV + TY A+I L
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGL 447
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
L+ L A + E L G +D+ + A ++AL+ + + A +++ +LK +
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVI-PNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
G + + F+ L L +I + EM CG N + ++ A K E
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
L L M + I VV F ++I+ C+ + A+ F ++ G + N+ +
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG--LQANAAIFTAM 619
Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
I+G CK +VE A + M++ G+ + Y +L+DG + G+ EAL L D+M + G+
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
+ + Y S + L ++ A L +MI + I PD + K GC+ +A +
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Query: 416 LHNQVLEEHMV 426
L + +++ ++
Sbjct: 740 LQSYLMKHQLL 750
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 255 bits (652), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 169/584 (28%), Positives = 291/584 (49%), Gaps = 11/584 (1%)
Query: 75 KLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSV----SPLE 130
+L L+F+ W +R +LES C ++HL V + A L+ + + S ++
Sbjct: 102 RLVLDFFDWA--RSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQ 159
Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
F + L+ +Y+ + P VFD + G A V +K+ G +S+ + N +L+
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 191 LVK-LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
L K + +++E G NV ++N+VI+ +C+ +++EA L M G P
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
+V+ ++ ++N C+ G+L+ K+++ + VM + PNS + II C++ ++ AE
Sbjct: 280 DVISYSTVVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
E MI+ GI + Y TLIDG+ + G A + EM R + P+ + Y + I
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
GD+ A + +M K + PD T++ L G C+ G +K AF++HN +++ +
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
+Y LI+ LCK +L +A +LL M GL P+I TY ++++G CK GNIE AV++
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGK 548
+ + V Y ++++ CK +D A+ +L+ GL I T+N L+NG+ ++G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
+ + + + M GIA N +N L+ C + A + K M G+ PD TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEK 652
LV K + +E L +M G S TY+ +I L K
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 257/486 (52%), Gaps = 6/486 (1%)
Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
A ++ ++ Q+G + A+ ++ +++KG++ + +++ ++ + E+ + WKL +
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
M G N + +I LC+ CKL EA + M++ GI P+ V + +I+ C+ GD
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
+ A K F +M + P+ +T+ II+GFC++G + A ++ + M G++ + T
Sbjct: 367 IRAASKFFYEM---HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
+ LI+GY + G ++A R+ + M++ G PN V Y + I L EGD++ A +L +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
+ P+ FTY+ + GLC++G +++A KL + + D +Y L++ CKS +
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
A+++L M+ +GL P I+T+ L++G+C G +E ++ M PN +NS++
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 507 NGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
C +L AA ++ + S+ +G D TY L+ G+ + EA+ +F EM+ G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVG-PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
+V+ Y++LI K + +ARE+ M G+ D + K P+ +++
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVD 722
Query: 625 LHDDMV 630
D+++
Sbjct: 723 PIDEII 728
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 36/264 (13%)
Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM 490
SYNI+I+++C+ + A LL M ++G PD+I+Y T+++GYC+ G ++ ++ E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 491 KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKI 549
K+ KPN IY SII LC+ L A+ R G+L D + Y TLI+G+ G I
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 550 -----------------------------------AEAFAMFSEMRNVGIAVNKVGYNIL 574
EA +F EM G+ + V + L
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
IN CK G + A + MI G P+ VTYTTL+ K + EL +M G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 635 SPDNQTYNAIISPLLGEKSAEDQV 658
P+ TYN+I++ L + E+ V
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAV 511
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 120/304 (39%), Gaps = 45/304 (14%)
Query: 91 SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF- 149
+H +++ C+ +V + D L G+L SAN + + GL P +F
Sbjct: 445 NHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL---------QPNIFT 493
Query: 150 -DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
+++V + G E A ++ + + G + + + K E+ + ++ KEM+
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553
Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
G + TFN+++ C LE+ L ML GI PN FN ++ + C +L+
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 269 FALKLFRKM---GV-----------------------------MSGDSVLPNSVTHNCII 296
A +++ M GV M G + T++ +I
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
GF K + A E+ M + G+ + + D +G + + DE+++ L+
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
Query: 357 PNNV 360
+
Sbjct: 734 DEQL 737
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 177/612 (28%), Positives = 293/612 (47%), Gaps = 42/612 (6%)
Query: 75 KLALEFYTWVGENNRF--SHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL 132
KLAL+F WV + H ++ C H+LV R +D A ++ L + S F
Sbjct: 51 KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF- 109
Query: 133 EGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
L+ +Y +C + P+V+D L+R + G + + ++ + + + G + S++ N L +V
Sbjct: 110 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169
Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
K E W KEM+ +V TFN++I LC E E++ L +M KSG P +V
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 253 CFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
+N +++ C+ G + A++L M D+ + T+N +I+ C+ R+ +
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA---DVCTYNMLIHDLCRSNRIAKGYLLL 286
Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
M K I N TY TLI+G++ G A +L +EM+ GL PN+V +N+ I +E
Sbjct: 287 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346
Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
G+ + AL + M K + P +Y +L GLC+N A + ++ + +Y
Sbjct: 347 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406
Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
+I+ LCK+ L A LL+ M G+ PDI+TY LI+G+CK G + A ++ + +
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNT------------- 538
V PN +IY+++I C+ L A + +A G D T+N
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 539 ----------------------LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILIN 576
LINGY +G+ +AF++F EM VG Y L+
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 577 FLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSP 636
LCK G ++A + +K + D V Y TL+T K+ + + + L +MV + P
Sbjct: 587 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Query: 637 DNQTYNAIISPL 648
D+ TY ++IS L
Sbjct: 647 DSYTYTSLISGL 658
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 216/498 (43%), Gaps = 38/498 (7%)
Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
FD L+ G A+ V ++ GH + + + L L K + K K +
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
+ + +N ++ A+CK L +A+SL+ M++ I P+ + +I+ C+ G
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
A+ LF K G+ VLPN V + C ++G K G+ + R M G ++ T
Sbjct: 666 IAI-LFAKEAEARGN-VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
+IDGY+R G E+ L EM + PN YN +H DV + + +I
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 783
Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC-------- 440
I PD T L G+C + ++ K+ + + D Y++N+LI+ C
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 441 ---------------------------KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDG 473
+++ ++ +L M +G+ P+ Y LI+G
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 903
Query: 474 YCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA 533
C+ G+I+ A V E M + P V ++++ L K D A LL+ ++ L+
Sbjct: 904 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 963
Query: 534 I-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
I ++ TL++ NG + EA + M N G+ ++ V YN+LI LC G A EL +
Sbjct: 964 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1023
Query: 593 VMILHGIIPDYVTYTTLV 610
M G + + TY L+
Sbjct: 1024 EMKGDGFLANATTYKALI 1041
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 164/349 (46%), Gaps = 4/349 (1%)
Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
GH+ I N + ++ +I + L EM + N+ T+N++++ K + +
Sbjct: 714 GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773
Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
LY ++ +GI P+ + + ++ C+ LE LK+ + + G V + T N +
Sbjct: 774 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF-ICRGVEV--DRYTFNML 830
Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
I+ C G + +A ++ M GI + T ++ R +E+ + EM K+G+
Sbjct: 831 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 890
Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
P + Y I+ L GD++ A V +MI ICP + S + + L + G +A
Sbjct: 891 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 950
Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
L +L+ +V S+ L++ CK+ N+ A +L M GL D+++Y LI G C
Sbjct: 951 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1010
Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIING-LCKDASLDAAKSLLQ 523
G++ A ++YE MK N Y ++I G L ++ + A +L+
Sbjct: 1011 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILK 1059
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
Y+ILI + + + ++ M + G P + T ++ K G V V+ +K
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE---DVSVWSFLK 182
Query: 492 KVEKK---PNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFING 547
++ K+ P++ +N +IN LC + S + + L+Q ++ G I TYNT+++ Y G
Sbjct: 183 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 242
Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
+ A + M++ G+ + YN+LI+ LC+ + L++ M I P+ VTY
Sbjct: 243 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
TL+ FS +L ++M+ G+SP++ T+NA+I + E
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 346
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%)
Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
Y+ILI + G Q + E+ ++M L+G P T ++ K+ V +M+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
+ PD T+N +I+ L E S E
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFE 210
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/634 (27%), Positives = 306/634 (48%), Gaps = 66/634 (10%)
Query: 47 KWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVN 106
K L+ M +++ S V+ + S PK AL F W+ +N R+ HS+ S +++ LL+N
Sbjct: 77 KSPSLKSMVSAISPSHVSSLFS-LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLIN 135
Query: 107 WRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDAL--VRACTQIGATEG 164
N + F LL + K+ +V DAL + C ++ E
Sbjct: 136 -----------------NGYVGVVFKIRLL----MIKSCDSVGDALYVLDLCRKMNKDE- 173
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
+ ++K + + I +N L+ L + + ++Y EM+ N+ T+N ++
Sbjct: 174 ------RFELK-YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN 226
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV----- 279
CK +EEA +++++G+ P+ + +I CQ DL+ A K+F +M +
Sbjct: 227 GYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR 286
Query: 280 ---------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
M D P T+ +I C R A +
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
M + GI N+ TY LID E+A L +M+++GLMPN + YN+ I+
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
G +E A+ V+ M + + P+ TY+ L KG C++ V +A + N++LE ++ D +Y
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465
Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
N LI+ C+S N +A +LLS M RGL+PD TY ++ID CK +E A +++++++
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAE 551
PN+V+Y ++I+G CK +D A +L+ + L +++T+N LI+G +GK+ E
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
A + +M +G+ ILI+ L K G + A + M+ G PD TYTT +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+ + + ++ M +GVSPD TY+++I
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 247/473 (52%), Gaps = 15/473 (3%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMV-SCGYVENVNTFNLVIYALCKECKLEEALSL 238
S++++ + L+ L+ +G +K+ M+ SC V + L + LC++ +E L
Sbjct: 122 SVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDA----LYVLDLCRKMNKDERFEL 177
Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
Y+++ + C+N ++N + G ++ +++ +M D V PN T+N ++NG
Sbjct: 178 KYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEM---LEDKVCPNIYTYNKMVNG 227
Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
+CKLG VE A + +++AG+D + TY +LI GY + + A ++ +EM +G N
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRN 287
Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
V Y IH L ++ A+ + M D P TY++L K LC + +A L
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
++ E + + ++Y +LI+ LC A++LL M+ +GL+P++ITY LI+GYCK G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNT 538
IE AV V E M+ + PN YN +I G CK A L + +R L D +TYN+
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
LI+G +G A+ + S M + G+ ++ Y +I+ LCK ++A +L + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
+ P+ V YT L+ + K +E + + M+ P++ T+NA+I L +
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 23/517 (4%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
+ +L+ Q + A+ V ++ +KG + A+ + + L I L+ +M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
V T+ ++I +LC + EAL+L M ++GI PN+ + ++I+ C
Sbjct: 315 KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKF 374
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
E A +L +G M ++PN +T+N +ING+CK G +E A ++ M + N RTY
Sbjct: 375 EKAREL---LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
LI GY + + +A+ + ++M++R ++P+ V YNS I G+ + A +LS M D
Sbjct: 432 NELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ + PD +TY+ + LC++ V++A L + + ++ + + Y LI+ CK+ +
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
A +L M+ + +P+ +T+ LI G C G ++ A + E M K+ +P + +I+
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
L KD D A S Q G DA TY T I Y G++ +A M ++MR G++
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF-------SKNCSP 619
+ Y+ LI G A +++K M G P T+ +L+ K P
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 620 E-----------EVIELHDDMVLSGVSPDNQTYNAII 645
E V+EL + MV V+P+ ++Y +I
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/600 (23%), Positives = 267/600 (44%), Gaps = 74/600 (12%)
Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
++H L RR D+A+ L + + C T + L+++
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKD-----------------DECFPTVRTYTVLIKSLCGS 336
Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
A +++++++ G +IH + + L + + +L +M+ G + NV T+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 220 NLVIYALCKECKLEEA----------------------------------LSLYYRMLKS 245
N +I CK +E+A + + +ML+
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456
Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
+ P+VV +N +I+ C+ G+ + A +R + +M+ ++P+ T+ +I+ CK RV
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSA---YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
E A ++ ++ + G++ NV Y LIDGY + G +EA + ++M+ + +PN++ +N+
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
IH L A+G ++ A + M+ + P T +IL L ++G A+ Q+L
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
DA++Y I C+ L A+ +++ M G+ PD+ TY +LI GY G A
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 486 VYENMKKVEKKPNLVIYNSIINGLCK---------DASLDAAKSLLQASQRIGLLD---- 532
V + M+ +P+ + S+I L + + L A ++++ + LL+
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 533 ------AITYNTLINGYFINGKIAEAFAMFSEM-RNVGIAVNKVGYNILINFLCKFGCYQ 585
A +Y LI G G + A +F M RN GI+ +++ +N L++ CK +
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+A +++ MI G +P + L+ K E + +++ G D + II
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 9/348 (2%)
Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
E++Y +I I C Y TL++ AR G +E ++ EM++ + PN YN ++
Sbjct: 176 ELKYKLI---IGC----YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGY 228
Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
G+VE A +S +++ + PD FTY+ L G C+ + AFK+ N++ + +
Sbjct: 229 CKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE 288
Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
+Y LI+ LC + + A L M P + TY LI C A+ + +
Sbjct: 289 VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGK 548
M++ KPN+ Y +I+ LC + A+ LL GL+ + ITYN LINGY G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
I +A + M + ++ N YN LI CK ++ A ++ M+ ++PD VTY +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNS 467
Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
L+ ++ + + L M G+ PD TY ++I L K E+
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 193/415 (46%), Gaps = 23/415 (5%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
+ +++ + + E A D+ L+ KG + ++ + + K ++ + ++M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
+S + N TFN +I+ LC + KL+EA L +M+K G+ P V ++I+ + GD
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
+ A F++M + SG P++ T+ I +C+ GR+ AE++ M + G+ ++ TY
Sbjct: 619 DHAYSRFQQM-LSSGTK--PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF--AEGDVEGA------- 378
++LI GY G + A + M G P+ + S I L G +G+
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 379 ---------LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE-EHMVGD 428
+ +L M++ + P+ +Y L G+C G ++ A K+ + + E +
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
+N L++ CK A +++ MI G +P + + LI G K G E V++
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
N+ + + + + II+G+ K ++A L ++ G + TY+ LI G
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 203/484 (41%), Gaps = 30/484 (6%)
Query: 134 GLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
G+L+ K P V +++L+ + G + AY ++ + +G + + + L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
K + L+ + G NV + +I CK K++EA + +ML PN
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
+ FN +I+ C G L+ A L KM + + P T +I+ K G + A
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKI---GLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
M+ +G + TY T I Y R G +A + +M + G+ P+ Y+S I
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
G A VL M D P T+ L K L KQ
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE------------- 731
Query: 432 YNILINYLCKSNNLA---AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
LC +N+ +LL M+ + P+ +Y LI G C+ GN+ A +V++
Sbjct: 732 -------LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 489 NMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFIN 546
+M++ E P+ +++N++++ CK + A ++ +G L + + LI G +
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
G+ ++F + G +++ + I+I+ + K G + EL VM +G TY
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Query: 607 TTLV 610
+ L+
Sbjct: 905 SLLI 908
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 8/256 (3%)
Query: 404 LCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPD 463
LCR + F+L +++ +G YN L+N L + + KQ+ M+ + P+
Sbjct: 165 LCRKMNKDERFELKYKLI----IG---CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 464 IITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ 523
I TY +++GYCK GN+E A Q + + P+ Y S+I G C+ LD+A +
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 524 ASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
G + + Y LI+G + +I EA +F +M++ Y +LI LC
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYN 642
+A L+K M GI P+ TYT L+ C E+ EL M+ G+ P+ TYN
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 643 AIISPLLGEKSAEDQV 658
A+I+ ED V
Sbjct: 398 ALINGYCKRGMIEDAV 413
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/613 (26%), Positives = 302/613 (49%), Gaps = 28/613 (4%)
Query: 50 ILEQMAPSLTNS---LVNRVVSEFRKSPK--LALEFYTWVGENNRFSHSLESSCAIVHLL 104
+L++M S ++ L N + F K K +A +F+ + E N + +++ +L
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVL 283
Query: 105 VNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG 164
R D+A+ + +L N P + ++ ++ G +
Sbjct: 284 CKANRLDEAVEMFEHL-EKNRRVPCTY----------------AYNTMIMGYGSAGKFDE 326
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
AY ++++ + KG S+ A+N L+ L K+ ++ K+++EM N++T+N++I
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILID 385
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
LC+ KL+ A L M K+G++PNV N++++ C+ L+ A +F +M
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY---KV 442
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
P+ +T +I+G K+GRV+ A ++ M+ + N Y +LI + G E+
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
++ +M+ + P+ + N+ + +F G+ E + ++ + PD +YSIL GL
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
+ G + ++L + E+ V D +YNI+I+ CK + A QLL M +G P +
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
+TYG++IDG K ++ A ++E K + N+VIY+S+I+G K +D A +L+
Sbjct: 623 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
+ GL + T+N+L++ +I EA F M+ + N+V Y ILIN LCK
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742
Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
+ +A + M G+ P ++YTT+++ +K + E L D +G PD+ YNA
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802
Query: 644 IISPLLGEKSAED 656
+I L A D
Sbjct: 803 MIEGLSNGNRAMD 815
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/578 (25%), Positives = 256/578 (44%), Gaps = 32/578 (5%)
Query: 77 ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
A+E++ W H ES +++ ++ R FD ++G + A G
Sbjct: 81 AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA----------GFG 130
Query: 137 DSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNE 196
S C +V C + YDV+Q ++ + A+ + +N
Sbjct: 131 PSVNTCIE-------MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 197 IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNM 256
L+++M GY V+ F +I KE +++ ALSL M S + ++V +N+
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 257 IINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMI 316
I+ +VG ++ A K F + + + + P+ VT+ +I CK R++ A E+ +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHE---IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 317 KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVE 376
K Y T+I GY G +EA L + +G +P+ + YN + L G V+
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 377 GALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILI 436
AL V +M K P+ TY+IL LCR G + AF+L + + + + + + NI++
Sbjct: 361 EALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 437 NYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKK 496
+ LCKS L A + M + PD IT+ +LIDG K G ++ A +VYE M + +
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 497 PNLVIYNSIINGLCKDASLDAAKSLLQ------ASQRIGLLDAITYNTLINGYFINGKIA 550
N ++Y S+I + + + S + LL NT ++ F G+
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL-----NTYMDCMFKAGEPE 534
Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
+ AMF E++ + Y+ILI+ L K G + EL M G + D Y ++
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
F K + +L ++M G P TY ++I L
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 194/405 (47%), Gaps = 7/405 (1%)
Query: 187 FLSHLVKLNEIGRF---WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
F S + L ++GR +K+Y++M+ N + +I + E+ +Y M+
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
P++ N ++ + G+ E +F ++ +P++ +++ +I+G K G
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI---KARRFVPDARSYSILIHGLIKAG 566
Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
E+ Y+M + G + R Y +IDG+ + G +A +L +EM +G P V Y
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
S I L ++ A + + K I + YS L G + G + +A+ + +++++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
+ + Y++N L++ L K+ + A SM P+ +TYG LI+G CK A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLING 542
++ M+K KP+ + Y ++I+GL K ++ A +L + G+ D+ YN +I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
+ +AF++F E R G+ ++ +L++ L K C +QA
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 187/397 (47%), Gaps = 11/397 (2%)
Query: 138 SYEICKATPAVFDALVRACTQIGATEGAYDVIQKL---KVKGHSVSIHAW-NNFLSHLVK 193
Y++C F +L+ ++G + AY V +K+ + +S+ + NF +H K
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRK 498
Query: 194 LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVC 253
E G K+YK+M++ ++ N + + K + E+ +++ + P+
Sbjct: 499 --EDGH--KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 254 FNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRY 313
++++I+ + G FA + + M + ++ +N +I+GFCK G+V A ++
Sbjct: 555 YSILIHGLIKAG---FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 314 AMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEG 373
M G + V TY ++IDG A+ +EA L +E + + N V+Y+S I G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 374 DVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYN 433
++ A +L +++ K + P+ +T++ L L + + +A + E + +Y
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 434 ILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
ILIN LCK A M +G+ P I+Y T+I G K GNI A +++ K
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
P+ YN++I GL A SL + ++R GL
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 154/624 (24%), Positives = 304/624 (48%), Gaps = 45/624 (7%)
Query: 26 FANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVG 85
FA+ ++ ++ L++ ++ L ++ + T + ++ + + L L+F W
Sbjct: 15 FASSPSDSLLADKALTFLKRHPYQ-LHHLSANFTPEAASNLLLKSQNDQALILKFLNWAN 73
Query: 86 ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA---NSVSPLEFLEGLLDSYEIC 142
+ F+ L C +H+L ++ + A +L ++ + + + L F + L ++Y++C
Sbjct: 74 PHQFFT--LRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVF-KSLQETYDLC 130
Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
+T +VFD +V++ +++ + A ++ + G + ++N L ++
Sbjct: 131 YSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR------ 184
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
+ + ENV + ML+S + PNV +N++I C
Sbjct: 185 ------NISFAENV----------------------FKEMLESQVSPNVFTYNILIRGFC 216
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
G+++ AL LF KM LPN VT+N +I+G+CKL +++ ++ +M G++
Sbjct: 217 FAGNIDVALTLFDKM---ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
N+ +Y +I+G R G +E + EM +RG + V YN+ I EG+ AL +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
++M+ + P TY+ L +C+ G + +A + +Q+ + + +Y L++ +
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+ A ++L M G P ++TY LI+G+C G +E A+ V E+MK+ P++V Y
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
+++++G C+ +D A + + G+ D ITY++LI G+ + EA ++ EM
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
VG+ ++ Y LIN C G ++A +L M+ G++PD VTY+ L+ +K E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
L + P + TY+ +I
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLI 597
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 234/434 (53%), Gaps = 5/434 (1%)
Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG-DLEFALKLFR 275
+ F+LV+ + + +++ALS+ + G P V+ +N +++ + ++ FA +F+
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
+M V PN T+N +I GFC G ++ A + M G NV TY TLIDGY
Sbjct: 195 EM---LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
+ ++ +L M +GL PN + YN I+ L EG ++ FVL++M + D
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
TY+ L KG C+ G QA +H ++L + +Y LI+ +CK+ N+ A + L M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
VRGL P+ TY TL+DG+ + G + A +V M P++V YN++ING C +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 516 DAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
+ A ++L+ + GL D ++Y+T+++G+ + + EA + EM GI + + Y+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
I C+ ++A +L + M+ G+ PD TYT L+ + E+ ++LH++MV GV
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 635 SPDNQTYNAIISPL 648
PD TY+ +I+ L
Sbjct: 552 LPDVVTYSVLINGL 565
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 264/542 (48%), Gaps = 24/542 (4%)
Query: 94 LESSCAIVHLLVNWRRFDDALLLMGNLMSAN--SVSPLEFLEGLLDSYEICKATPAVF-- 149
++ + +IVHL F +L ++ A S + F E + + +P VF
Sbjct: 150 IDKALSIVHL-AQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTY 208
Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
+ L+R G + A + K++ KG ++ +N + KL +I +KL + M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
G N+ ++N+VI LC+E +++E + M + G + V +N +I C+ G+
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
AL + +M + G + P+ +T+ +I+ CK G + A E M G+ N RTY T
Sbjct: 329 ALVMHAEM-LRHG--LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
L+DG+++ G EA R+ EM G P+ V YN+ I+ G +E A+ VL DM +K
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
+ PD +YS + G CR+ V +A ++ +++E+ + D +Y+ LI C+ A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
L M+ GL PD TY LI+ YC G++E A+Q++ M + P++V Y+ +INGL
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 510 CKDA-SLDAAKSLLQASQRIGLLDAITYNT---------------LINGYFINGKIAEAF 553
K + + +A + LL+ + +TY+T LI G+ + G + EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 554 AMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
+F M + YNI+I+ C+ G ++A L K M+ G + VT LV
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Query: 614 SK 615
K
Sbjct: 686 HK 687
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 217/419 (51%), Gaps = 8/419 (1%)
Query: 233 EEALSLYYRMLKSGI---WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
+E SL ++ L+ + F++++ ++ ++ AL + + +P
Sbjct: 113 DEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVH---LAQAHGFMPGV 169
Query: 290 VTHNCIINGFCKLGR-VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
+++N +++ + R + FAE + M+++ + NV TY LI G+ G+ + AL L D
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
+M +G +PN V YN+ I ++ +L M K + P+ +Y+++ GLCR G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
+K+ + ++ D +YN LI CK N A + + M+ GL P +ITY
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
+LI CK GN+ A++ + M+ PN Y ++++G + ++ A +L+
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 529 GLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
G ++ TYN LING+ + GK+ +A A+ +M+ G++ + V Y+ +++ C+ +A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
+ + M+ GI PD +TY++L+ F + +E +L+++M+ G+ PD TY A+I+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 198/398 (49%), Gaps = 3/398 (0%)
Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
A + D E+A +F+ + + D S + ++ + +L ++ A I + G
Sbjct: 107 AAKTLDDEYASLVFKSLQ-ETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 321 DCNVRTYATLIDGYARGGSS-EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
V +Y ++D R + A + EM++ + PN YN I G+++ AL
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
+ M K P+ TY+ L G C+ + FKL + + + + SYN++IN L
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
C+ + +L+ M RG D +TY TLI GYCK GN A+ ++ M + P++
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
+ Y S+I+ +CK +++ A L + GL + TY TL++G+ G + EA+ + E
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
M + G + + V YN LIN C G + A +++ M G+ PD V+Y+T+++ F ++
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+E + + +MV G+ PD TY+++I ++ ++
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 223/503 (44%), Gaps = 103/503 (20%)
Query: 135 LLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLV 192
L D E P V ++ L+ ++ + + +++ + +KG ++ ++N ++ L
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 193 KLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVV 252
+ + + EM GY + T+N +I CKE +AL ++ ML+ G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 253 CFNMIINEACQVGDLEFALKLFRKMGV--------------------------------M 280
+ +I+ C+ G++ A++ +M V M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
+ + P+ VT+N +ING C G++E A + M + G+ +V +Y+T++ G+ R
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
+EALR+ EMV++G+ P+ + Y+S I + + A + +M+ + PD FTY+ L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
C G +++A +LHN+++E+ ++ D +Y++LIN L K + AK+LL +
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 461 IPDIITYGTLID------------------------------------------------ 472
+P +TY TLI+
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 473 --GYCKGGNIEGAVQVYENM----------------KKVEKKPNLVIYNSIINGL---CK 511
G+C+ G+I A +Y+ M K + K+ + NS+I + C+
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCE 706
Query: 512 DASLDAAKSLLQASQRIGLLDAI 534
+ + AK L++ + R G +D +
Sbjct: 707 LSEAEQAKVLVEINHREGNMDVV 729
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 20/339 (5%)
Query: 145 TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
+P+V ++AL+ G E A V++ +K KG S + +++ LS + ++ +
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
+ +EMV G + T++ +I C++ + +EA LY ML+ G+ P+ + +IN C
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI----------- 311
GDLE AL+L +M V G VLP+ VT++ +ING K R A+ +
Sbjct: 532 MEGDLEKALQLHNEM-VEKG--VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 312 ----RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
+ +I+ + ++ +LI G+ G EA ++ + M+ + P+ YN IH
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
GD+ A + +M+ T L K L + G V + + VL +
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS 708
Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
+A +L+ + N+ +L+ M G +P+ I+
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 182/635 (28%), Positives = 300/635 (47%), Gaps = 53/635 (8%)
Query: 72 KSPKLALEFYTWVGENNRFSHSLESSC---AIVHLLVNWRRFDDALLLMGNLMSANSVSP 128
K P+ + F+ W + + +S ++V L++ +F DA L+ + + + S
Sbjct: 53 KKPETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDAS- 111
Query: 129 LEFLEGLLDSYEICKATP--AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNN 186
L LL P A+FD + A G A + QK+ ++ N
Sbjct: 112 LSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNT 171
Query: 187 FLSHLVKLNE---IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
L LV+ I +++ +MV G NV TFN+++ C E KLE+AL + RM+
Sbjct: 172 LLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231
Query: 244 ------------------------------------KSGIWPNVVCFNMIINEACQVGDL 267
K+G+ PN V +N ++ C++G L
Sbjct: 232 SEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL 291
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
+ A F+ + +M +VLP+ T+N +ING C G + E+ AM + +V TY
Sbjct: 292 KEA---FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTY 348
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
TLIDG G S EA +L ++M G+ N V +N ++ WL E E + +++D
Sbjct: 349 NTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD 408
Query: 388 KH-ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
H PD TY L K + G + A ++ ++ ++ + + + N +++ LCK L
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
A LL+S RG I D +TYGTLI G+ + +E A+++++ MKKV+ P + +NS+I
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
GLC + A GLL D T+N++I GY G++ +AF ++E
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
+ NIL+N LCK G ++A +I + D VTY T+++ F K+ +E +L
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDL 647
Query: 626 HDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
+M G+ PD TYN+ IS L+ G+ S D++
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Score = 40.0 bits (92), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
+ F++++ + G E A++ + + N L+ L K + +
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616
Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
++ V+ V T+N +I A CK+ KL+EA L M + G+ P+ +N I+ + G
Sbjct: 617 LIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Query: 267 L----EFALKLFRKMGVMSGD 283
L E K K G M D
Sbjct: 676 LSETDELLKKFSGKFGSMKRD 696
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/617 (26%), Positives = 307/617 (49%), Gaps = 37/617 (5%)
Query: 63 VNRVVSEF-RKSPKLALEFYTWVGEN--NRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
+NR +++ R SP A+ Y + + + L + ++ R D +GN
Sbjct: 53 LNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGN 112
Query: 120 LMS----ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEG--AYDVIQKL- 172
++ ++++ L+GL K T D ++R T++G +Y+++ K
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCAD----KRTSDAMDIVLRRMTELGCIPNVFSYNILLKGL 168
Query: 173 -------------------KVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYV 213
+ G + ++ ++ K + + + Y EM+ G +
Sbjct: 169 CDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGIL 228
Query: 214 ENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKL 273
+V T+N +I ALCK +++A+ + M+K+G+ P+ + +N I++ C G + A+
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 274 FRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
+KM D V P+ VT++ +++ CK GR A +I +M K G+ + TY TL+ G
Sbjct: 289 LKKM---RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQG 345
Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
YA G+ E L D MV+ G+ P++ V++ I +G V+ A+ V S M + + P+
Sbjct: 346 YATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
TY + LC++G V+ A Q+++E + YN LI+ LC N A++L+
Sbjct: 406 AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELIL 465
Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
M+ RG+ + I + ++ID +CK G + + +++E M ++ KPN++ YN++ING C
Sbjct: 466 EMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAG 525
Query: 514 SLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
+D A LL +GL + +TY+TLINGY ++ +A +F EM + G++ + + YN
Sbjct: 526 KMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYN 585
Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
I++ L + A+EL + G + TY ++ KN ++ +++ ++ L
Sbjct: 586 IILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLM 645
Query: 633 GVSPDNQTYNAIISPLL 649
+ + +T+N +I LL
Sbjct: 646 DLKLEARTFNIMIDALL 662
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 201/419 (47%), Gaps = 4/419 (0%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A + + +G I + L + L MV G + F+++I
Sbjct: 320 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
A K+ K+++A+ ++ +M + G+ PN V + +I C+ G +E A+ F +M +
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM---IDEG 436
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
+ P ++ +N +I+G C + E AEE+ M+ GI N + ++ID + + G E+
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
+L + MV+ G+ PN + YN+ I+ G ++ A+ +LS M+ + P+ TYS L G
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556
Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
C+ ++ A L ++ + D +YNI++ L ++ AAAK+L + G ++
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
TY ++ G CK + A+Q+++N+ ++ K +N +I+ L K D AK L A
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVA 676
Query: 525 SQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
GL+ + TY + G + E +F M + G V+ N ++ L + G
Sbjct: 677 FSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 8/352 (2%)
Query: 315 MIKAGID---CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
M +AG D ++ TY LI R G + ++K+G + + + + L A
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 372 EGDVEGAL-FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG--- 427
+ A+ VL M + P+ F+Y+IL KGLC ++A +L + + ++ G
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
D SY +IN K + A M+ RG++PD++TY ++I CK ++ A++V
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
M K P+ + YNSI++G C A L+ + G+ D +TY+ L++ N
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
G+ EA +F M G+ Y L+ G + L+ +M+ +GI PD+ +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
+ L+ ++K ++ + + M G++P+ TY A+I L ED +
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM 426
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 3/344 (0%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
VF L+ A + G + A V K++ +G + + + + L K + +++M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
+ G +N +I+ LC K E A L ML GI N + FN II+ C+ G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
+ KLF +M V PN +T+N +ING+C G+++ A ++ M+ G+ N TY
Sbjct: 493 IESEKLFE---LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
+TLI+GY + E+AL L EM G+ P+ + YN + LF A + + +
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITE 609
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ TY+I+ GLC+N A ++ + + +A ++NI+I+ L K
Sbjct: 610 SGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 669
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
AK L + GL+P+ TY + + G +E Q++ +M+
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 160/355 (45%), Gaps = 20/355 (5%)
Query: 99 AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
A++ +L R +DA+L + E ++D E V+++L+
Sbjct: 411 AVIGILCKSGRVEDAML---------------YFEQMID--EGLSPGNIVYNSLIHGLCT 453
Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
E A ++I ++ +G ++ +N+ + K + KL++ MV G NV T
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
+N +I C K++EA+ L M+ G+ PN V ++ +IN C++ +E AL LF++
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE-- 571
Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
M V P+ +T+N I+ G + R A+E+ + ++G + TY ++ G +
Sbjct: 572 -MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630
Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
+++AL++ + L +N I L G + A + + P+++TY
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
++ + + G +++ +L + + D+ N ++ L + + A LS
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 269/546 (49%), Gaps = 14/546 (2%)
Query: 32 EDIVFRAICVNLRQRKWK-ILEQMAPS--LTNSLVNRVVSEFR-----KSPKLALEFYTW 83
E ++ ++IC + + WK IL+ S L +++ +V+SE P L+ F+ W
Sbjct: 10 EALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIW 69
Query: 84 VGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSY-EIC 142
HSL+SS ++ +L + F A L+ L +S L L+ E
Sbjct: 70 TDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDP 129
Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
+ VF L+ + G + V ++++ G + A L+ LVK WK
Sbjct: 130 EDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWK 189
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
++K+MV G V N++ +N++++A K E+A L M + G++P++ +N +I+ C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ AL + +M V PN VT+N I+GF + GR+ A + + IK +
Sbjct: 250 KKSMHFEALSVQDRM---ERSGVAPNIVTYNSFIHGFSREGRMREATRL-FREIKDDVTA 305
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
N TY TLIDGY R +EALRL + M RG P V YNS + L +G + A +L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
++M K I PD+ T + L C+ + A K+ +++E + D YSY LI+ CK
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
L AK+ L SMI +G P TY L+DG+ + ++ E +K ++ +Y
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRN 561
+I +CK +D AK L ++ ++ GL+ D++ + T+ Y+ GK+ EA A+F M N
Sbjct: 486 RGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYN 545
Query: 562 VGIAVN 567
+ VN
Sbjct: 546 RRLMVN 551
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 179/371 (48%), Gaps = 4/371 (1%)
Query: 278 GVMSGDSVLPNSVTH--NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
++ G S P V+H + ++ + K G + + + + G+ +++ L++
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
+ ++ ++ +MVK G++ N VYN +H GD E A +LS+M +K + PD F
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
TY+ L C+ +A + +++ + + +YN I+ + + A +L
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE- 298
Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
I + + +TY TLIDGYC+ +I+ A+++ E M+ P +V YNSI+ LC+D +
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 516 DAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
A LL + S + D IT NTLIN Y + A + +M G+ ++ Y L
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
I+ CK + A+E + MI G P Y TY+ LV F +E+ +L ++ G+
Sbjct: 419 IHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Query: 635 SPDNQTYNAII 645
D Y +I
Sbjct: 479 CADVALYRGLI 489
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 152/321 (47%), Gaps = 18/321 (5%)
Query: 343 ALRLCDEMVKRGLMPNNVVYNSTI--------------HWLF----AEGDVEGALFVLSD 384
A +L D++ +R L+ + +V S + WL G + ++ V
Sbjct: 99 AHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQ 158
Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
+ + P ++L L + +K+ ++++ +V + + YN+L++ KS +
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218
Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
A++LLS M +G+ PDI TY TLI YCK A+ V + M++ PN+V YNS
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 505 IINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
I+G ++ + A L + + + +TY TLI+GY I EA + M + G
Sbjct: 279 FIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGF 338
Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
+ V YN ++ LC+ G ++A L+ M I PD +T TL+ + K ++
Sbjct: 339 SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398
Query: 625 LHDDMVLSGVSPDNQTYNAII 645
+ M+ SG+ D +Y A+I
Sbjct: 399 VKKKMIESGLKLDMYSYKALI 419
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 156/331 (47%), Gaps = 2/331 (0%)
Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
++ L+ YA+ G +++ + +++ GL P+ ++ L + + + M+
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
+ + Y++L ++G ++A KL +++ E+ + D ++YN LI+ CK +
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
A + M G+ P+I+TY + I G+ + G + A +++ +K + N V Y ++I
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLI 314
Query: 507 NGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
+G C+ +D A L + + G + TYN+++ +G+I EA + +EM I
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
+ + N LIN CK A ++ K MI G+ D +Y L+ F K E E
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
M+ G SP TY+ ++ + ++
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 163/390 (41%), Gaps = 68/390 (17%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
V++ LV AC++ G E A ++ +++ KG I +N +S K + + M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
G N+ T+N I+ +E ++ EA L+ R +K + N V + +I+ C++ D+
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 268 EFALKLFRKM-------GV-------------------------MSGDSVLPNSVTHNCI 295
+ AL+L M GV MSG + P+++T N +
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
IN +CK+ + A +++ MI++G+ ++ +Y LI G+ + E A M+++G
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
P Y+ + + + + +L + + +C D Y +GL R
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY----RGLIRR-------- 491
Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
+CK + AK L SM +GL+ D + + T+ Y
Sbjct: 492 -----------------------ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYW 528
Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
+ G + A +++ M NL +Y SI
Sbjct: 529 RTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 251/514 (48%), Gaps = 35/514 (6%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI ++ LS + K+N+ L ++M + G N T++++I C+ +L AL++
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV-------------------- 279
+M+K G PN+V + ++N C + A+ L +M V
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 280 ------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
M P+ VT+ ++NG CK G + A + M + ++ V Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
T+IDG + ++AL L EM +G+ PN V Y+S I L G A +LSDMI+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ I PD FT+S L + G + +A KL++++++ + +Y+ LIN C + L
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AKQ+ M+ + PD++TY TLI G+CK +E ++V+ M + N V YN +I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
GL + D A+ + + G+ I TYNTL++G NGK+ +A +F ++ +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
YNI+I +CK G + +L + L G+ PD V Y T+++ F + S EE L
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
+M G P++ YN +I L G++ A ++
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 233/442 (52%), Gaps = 4/442 (0%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A ++ ++ V G+ + +N + L N+ L MV+ G ++ T+ +V+
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
LCK + A +L +M + + P V+ +N II+ C+ ++ AL LF++M
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM---ETKG 286
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
+ PN VT++ +I+ C GR A + MI+ I+ +V T++ LID + + G EA
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
+L DEMVKR + P+ V Y+S I+ ++ A + M+ KH PD TY+ L KG
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
C+ V++ ++ ++ + +VG+ +YNILI L ++ + A+++ M+ G+ P+I
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
+TY TL+DG CK G +E A+ V+E +++ + +P + YN +I G+CK ++ L
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
G+ D + YNT+I+G+ G EA A+F EM+ G N YN LI + G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 584 YQQARELMKVMILHGIIPDYVT 605
+ + EL+K M G D T
Sbjct: 587 REASAELIKEMRSCGFAGDAST 608
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 229/464 (49%), Gaps = 39/464 (8%)
Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
E KL++A++L+ M+KS +P+++ F+ +++ ++ + + L +M + + N
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG---IPHN 115
Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
T++ +IN FC+ ++ A + M+K G + N+ T ++L++GY EA+ L D
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
+M G PN V +N+ IH LF A+ ++ M+ K PD TY ++ GLC+ G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL----------------------- 445
AF L N++ + + YN +I+ LCK ++
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 446 ------------AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
+ A +LLS MI R + PD+ T+ LID + K G + A ++Y+ M K
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEA 552
P++V Y+S+ING C LD AK + + + D +TYNTLI G+ ++ E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
+F EM G+ N V YNILI L + G A+E+ K M+ G+ P+ +TY TL+
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
KN E+ + + + + S + P TYN +I + ED
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 236/485 (48%), Gaps = 4/485 (0%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A V+ K+ G+ +I ++ L+ I L +M GY N TFN +I+
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
L K EA++L RM+ G P++V + +++N C+ GD + A L KM
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM---EQGK 251
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
+ P + +N II+G CK ++ A + M GI NV TY++LI G +A
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
RL +M++R + P+ +++ I EG + A + +M+ + I P TYS L G
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
C + + +A ++ ++ +H D +YN LI CK + ++ M RGL+ +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
+TY LI G + G+ + A ++++ M PN++ YN++++GLCK+ L+ A + +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 525 SQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
QR + I TYN +I G GK+ + + +F + G+ + V YN +I+ C+ G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
++A L K M G +P+ Y TL+ ++ E EL +M G + D T
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 611
Query: 644 IISPL 648
+ + L
Sbjct: 612 VTNML 616
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 212/412 (51%), Gaps = 3/412 (0%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + +V + G T+ A++++ K++ + +N + L K +
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+KEM + G NV T++ +I LC + +A L M++ I P+V F+ +I+
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L A KL+ +M S D P+ VT++ +INGFC R++ A+++ M+
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSID---PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
+V TY TLI G+ + EE + + EM +RGL+ N V YN I LF GD + A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
+M+ + P+ TY+ L GLC+NG +++A + + M Y+YNI+I +CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + L ++ ++G+ PD++ Y T+I G+C+ G+ E A +++ MK+ PN
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
YN++I +D +A+ L++ + G + L+ +G++ ++F
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 625
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/592 (27%), Positives = 285/592 (48%), Gaps = 30/592 (5%)
Query: 77 ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
++E ++W G N + HS + ++ L F L+ + V ++
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 137 DSYEICKATPAVFDALV---RACTQIGATEGAYDVIQKLKVKG--HSVSIHAWNNFLSHL 191
Y+ P L+ R T +Y+V+ ++ V G H V+ + + + LS
Sbjct: 154 RDYDKA-GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK 212
Query: 192 VK---------------LNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL 236
+ +NEI L ++M G V N + +I++L K ++ EAL
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 237 SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII 296
L M G P+ FN +I C+ + A K+ +M + P+ +T+ ++
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG---FAPDDITYGYLM 329
Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GL 355
NG CK+GRV+ A+++ Y + K + + TLI G+ G ++A + +MV G+
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
+P+ YNS I+ + EG V AL VL DM +K P+ ++Y+IL G C+ G + +A+
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
+ N++ + + + +N LI+ CK + + A ++ M +G PD+ T+ +LI G C
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAI 534
+ I+ A+ + +M N V YN++IN + + A+ L+ G LD I
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
TYN+LI G G++ +A ++F +M G A + + NILIN LC+ G ++A E K M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
+L G PD VT+ +L+ + E+ + + + G+ PD T+N ++S
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 247/507 (48%), Gaps = 34/507 (6%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
F +++A + + A +++ + G + + + L K N + +L +EM
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
G V + TFN VI LCK ++ EA + RML G P+ + + ++N C++G +
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 268 EFALKLFRKM-----------------------------GVMSGDSVLPNSVTHNCIING 298
+ A LF ++ +++ ++P+ T+N +I G
Sbjct: 339 DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
+ K G V A E+ + M G NV +Y L+DG+ + G +EA + +EM GL PN
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
V +N I E + A+ + +M K PD +T++ L GLC +K A L
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
++ E +V + +YN LIN + + A++L++ M+ +G D ITY +LI G C+ G
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYN 537
++ A ++E M + P+ + N +INGLC+ ++ A + R D +T+N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
+LING G+I + MF +++ GI + V +N L+++LCK G A L+ I
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIE 624
G +P++ T++ L+ ++ P+E ++
Sbjct: 699 GFVPNHRTWSILL----QSIIPQETLD 721
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 160/380 (42%), Gaps = 34/380 (8%)
Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK-RGLMPNNVV 361
G + + + M GI + +++ Y + G + RL EM P
Sbjct: 125 GEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKS 184
Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
YN + L + + A V DM+ + I P FT+ ++ K C + A L +
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIE 481
+ V ++ Y LI+ L K N + A QLL M + G +PD T+ +I G CK I
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 482 GAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL---------- 531
A ++ M P+ + Y ++NGLCK +DAAK L + ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364
Query: 532 -----------------------DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
D TYN+LI GY+ G + A + +MRN G N
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
Y IL++ CK G +A ++ M G+ P+ V + L++ F K E +E+ +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Query: 629 MVLSGVSPDNQTYNAIISPL 648
M G PD T+N++IS L
Sbjct: 485 MPRKGCKPDVYTFNSLISGL 504
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 158/603 (26%), Positives = 296/603 (49%), Gaps = 32/603 (5%)
Query: 61 SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
SL R V + SP L + G + S A++HL + D+A+ L G +
Sbjct: 2 SLAKRFVHLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHL-----KLDEAVDLFGEM 56
Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHS 178
+ + + P++ F L+ A ++ + +K+++ G S
Sbjct: 57 VKS-------------------RPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97
Query: 179 VSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
+++ +N ++ L + +++ + +M+ GY ++ T N ++ C ++ EA++L
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
+M++ G P+ V F +++ Q A+ L +M V P+ VT+ +ING
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV---KGCQPDLVTYGAVING 214
Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
CK G + A + M K I+ +V Y+T+ID + ++AL L EM +G+ P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
Y+S I L G A +LSDM+++ I P+ T++ L + G + +A KL +
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
++++ + + +YN LIN C + L A+Q+ + M+ + +PD++TY TLI+G+CK
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYN 537
+ ++++ +M + N V Y ++I+G + + D A+ + + G+ I TYN
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
TL++G NGK+ +A +F ++ + + YNI+ +CK G + +L + L
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAE 655
G+ PD + Y T+++ F K EE L M G PD+ TYN +I L G+K+A
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 656 DQV 658
++
Sbjct: 575 AEL 577
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 208/413 (50%), Gaps = 5/413 (1%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + A++ + G + A +++ K++ + ++ + L K +
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ EM + G +V T++ +I LC + +A L ML+ I PNVV FN +I+
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L A KLF +M S D PN VT+N +INGFC R++ A++I M+
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSID---PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
+V TY TLI+G+ + + + L +M +RGL+ N V Y + IH F D + A V
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
M+ + P+ TY+ L GLC+NG +++A + + + M D Y+YNI+ +CK
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + L S+ ++G+ PD+I Y T+I G+CK G E A ++ MK+ P+
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
YN++I +D A+ L++ + DA TY L+ +G++ + F
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 609
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 185/416 (44%), Gaps = 21/416 (5%)
Query: 71 RKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLE 130
R P LAL + E + + ++ L +R DDAL L M + P
Sbjct: 218 RGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE-MDNKGIRPDV 275
Query: 131 FLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSH 190
F + +L+ G A ++ + + + ++ +N+ +
Sbjct: 276 F----------------TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 191 LVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
K ++ KL+ EM+ N+ T+N +I C +L+EA ++ M+ P+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEE 310
VV +N +IN C+ + ++LFR M S ++ N+VT+ +I+GF + + A+
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDM---SRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 311 IRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLF 370
+ M+ G+ N+ TY TL+DG + G E+A+ + + + K + P+ YN +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 371 AEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY 430
G VE + + K + PD Y+ + G C+ G ++A+ L ++ E+ + D+
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 431 SYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQV 486
+YN LI + + AA+ +L+ M D TYG + D G +G ++V
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEV 612
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 258/516 (50%), Gaps = 8/516 (1%)
Query: 143 KATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
+ P V F+ L A + E + ++++ KG + SI+ + ++ + ++
Sbjct: 83 RPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA 142
Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
+ +++ GY + FN ++ LC EC++ EAL L RM++ G P ++ N ++N
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
C G + A+ L +M V +G PN VT+ ++N CK G+ A E+ M + I
Sbjct: 203 LCLNGKVSDAVVLIDRM-VETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
+ Y+ +IDG + GS + A L +EM +G + + YN+ I G +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
+L DMI + I P+ T+S+L + G +++A +L ++++ + + +YN LI+ C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
K N L A Q++ MI +G PDI+T+ LI+GYCK I+ ++++ M N V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 501 IYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
YN+++ G C+ L+ AK L Q S+R+ D ++Y L++G NG++ +A +F +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR-PDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
+ + ++ Y I+I+ +C A +L + L G+ D Y +++ + S
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
+ L M G +PD TYN +I LG+ A
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 247/485 (50%), Gaps = 4/485 (0%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A+ + K+ G+ +N L+ L + +L MV G+ + T N ++
Sbjct: 142 AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
LC K+ +A+ L RM+++G PN V + ++N C+ G A++L RKM +
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM---EERN 258
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
+ ++V ++ II+G CK G ++ A + M G ++ TY TLI G+ G ++
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
+L +M+KR + PN V ++ I EG + A +L +M+ + I P+ TY+ L G
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
C+ +++A ++ + ++ + D ++NILIN CK+N + +L M +RG+I +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
+TY TL+ G+C+ G +E A ++++ M +P++V Y +++GLC + L+ A +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
++ + LD Y +I+G K+ +A+ +F + G+ ++ YNI+I+ LC+
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDS 558
Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
+A L + M G PD +TY L+ + EL ++M SG D T
Sbjct: 559 LSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM 618
Query: 644 IISPL 648
+I+ L
Sbjct: 619 VINML 623
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 224/455 (49%), Gaps = 4/455 (0%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L+++M+ + V FN + A+ K + E L+L +M GI ++ +++IN C
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ L +A F MG + P++V N ++NG C RV A E+ M++ G
Sbjct: 135 RCRKLSYA---FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+ T TL++G G +A+ L D MV+ G PN V Y ++ + G A+ +L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
M +++I D YSI+ GLC++G + AF L N++ + D +YN LI C +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+LL MI R + P+++T+ LID + K G + A Q+ + M + PN + Y
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
NS+I+G CK+ L+ A ++ G D +T+N LINGY +I + +F EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G+ N V YN L+ C+ G + A++L + M+ + PD V+Y L+ N E+
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+E+ + S + D Y II + +D
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 258/531 (48%), Gaps = 23/531 (4%)
Query: 86 ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT 145
E+ +HS+ + +++ R+ A MG +M YE
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL--------------GYE---PD 157
Query: 146 PAVFDALVRA-CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
+F+ L+ C + +E A +++ ++ GH ++ N ++ L ++ L
Sbjct: 158 TVIFNTLLNGLCLECRVSE-ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
MV G+ N T+ V+ +CK + A+ L +M + I + V +++II+ C+
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
G L+ A LF +M + + + +T+N +I GFC GR + ++ MIK I NV
Sbjct: 277 GSLDNAFNLFNEMEIKGFKA---DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
T++ LID + + G EA +L EM++RG+ PN + YNS I E +E A+ ++
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
MI K PD T++IL G C+ + +L ++ ++ + +YN L+ C+S
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
L AK+L M+ R + PDI++Y L+DG C G +E A++++ ++K + + ++ IY
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
II+G+C + +D A L + G+ LDA YN +I+ +++A +F +M G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
A +++ YNILI A EL++ M G D T ++ S
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 213/419 (50%), Gaps = 4/419 (0%)
Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
K ++A+ L+ M++S P V+ FN + + + E L L ++M + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM---ESKGIAHSIY 124
Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
T + +IN FC+ ++ +A ++K G + + + TL++G EAL L D M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
V+ G P + N+ ++ L G V A+ ++ M++ P+ TY + +C++G
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
A +L ++ E ++ DA Y+I+I+ LCK +L A L + M ++G DIITY TL
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
I G+C G + ++ +M K + PN+V ++ +I+ K+ L A LL+ + G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
+ ITYN+LI+G+ ++ EA M M + G + + +NILIN CK E
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
L + M L G+I + VTY TLV F ++ E +L +MV V PD +Y ++ L
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 204/402 (50%), Gaps = 4/402 (0%)
Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
G T A ++++K++ + + ++ + L K + + L+ EM G+ ++ T+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
N +I C + ++ L M+K I PNVV F+++I+ + G L A +L ++M +
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-M 360
Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
G + PN++T+N +I+GFCK R+E A ++ MI G D ++ T+ LI+GY +
Sbjct: 361 QRG--IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
++ L L EM RG++ N V YN+ + G +E A + +M+ + + PD +Y I
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
L GLC NG +++A ++ ++ + M D Y I+I+ +C ++ + A L S+ ++G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
+ D Y +I C+ ++ A ++ M + P+ + YN +I D A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 520 SLLQASQRIGLLDAITYNTLINGYFINGKIAEAF-AMFSEMR 560
L++ + G ++ ++ +G++ ++F M S R
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 1/323 (0%)
Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFT 396
G +++A+ L +M++ +P + +N + E L + M K I +T
Sbjct: 66 GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
SI+ CR + AF ++++ D +N L+N LC ++ A +L+ M+
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
G P +IT TL++G C G + AV + + M + +PN V Y ++N +CK
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
A LL+ + + LDA+ Y+ +I+G +G + AF +F+EM G + + YN LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
C G + +L++ MI I P+ VT++ L+ F K E +L +M+ G++
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 636 PDNQTYNAIISPLLGEKSAEDQV 658
P+ TYN++I E E+ +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAI 388
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 256/514 (49%), Gaps = 35/514 (6%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI ++ LS + K+N+ L ++M + G N+ T++++I C+ +L AL++
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM--SGDSVL----------- 286
+M+K G P++V N ++N C + A+ L +M M DS
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
P+ VT+ ++NG CK G ++ A + M + I+ V Y
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
T+ID + +AL L EM +G+ PN V YNS I L G A +LSDMI+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ I P+ T+S L + G + +A KL++++++ + D ++Y+ LIN C + L
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AK + MI + P+++TY TLI G+CK ++ ++++ M + N V Y ++I+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
G + D A+ + + G+L D +TY+ L++G NGK+ A +F ++ +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
+ YNI+I +CK G + +L + L G+ P+ VTYTT+++ F + EE L
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
+M G PD+ TYN +I L G+K+A ++
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 228/463 (49%), Gaps = 33/463 (7%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A V+ K+ G+ I N+ L+ N I L +MV GY + TFN +I+
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH 194
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM------- 277
L + + EA++L RM+ G P++V + +++N C+ GD++ AL L +KM
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEP 254
Query: 278 GV-------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
GV M + PN VT+N +I C GR A +
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
MI+ I+ NV T++ LID + + G EA +L DEM+KR + P+ Y+S I+
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
++ A + MI K P+ TY+ L KG C+ V + +L ++ + +VG+ +Y
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
LI+ ++ A+ + M+ G++PDI+TY L+DG C G +E A+ V+E +++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
+ +P++ YN +I G+CK ++ L + G+ + +TY T+++G+ G E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
A A+F EM+ G + YN LI + G + EL++ M
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 225/455 (49%), Gaps = 4/455 (0%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L+ +MV ++ F+ ++ A+ K K + +SL +M GI N+ ++++IN C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ L AL + KM + + P+ VT N ++NGFC R+ A + M++ G
Sbjct: 128 RRSQLSLALAVLAKMMKLGYE---PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+ T+ TLI G R + EA+ L D MV +G P+ V Y ++ L GD++ AL +L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
M I P Y+ + LC V A L ++ + + + +YN LI LC
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+ A +LLS MI R + P+++T+ LID + K G + A ++Y+ M K P++ Y
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 503 NSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
+S+ING C LD AK + + + + +TYNTLI G+ ++ E +F EM
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G+ N V Y LI+ + A+ + K M+ G++PD +TY+ L+ N E
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+ + + + S + PD TYN +I + ED
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 3/412 (0%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + +V + G + A +++K++ + +N + L +
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ EM + G NV T+N +I LC + +A L M++ I PNVV F+ +I+
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L A KL+ +M S D P+ T++ +INGFC R++ A+ + MI
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
NV TY TLI G+ + +E + L EM +RGL+ N V Y + IH F + + A V
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
M+ + PD TYSIL GLC NG V+ A + + M D Y+YNI+I +CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + L S+ ++G+ P+++TY T++ G+C+ G E A ++ MK+ P+
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
YN++I +D A+ L++ + + + L+ +G++ ++F
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSF 625
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 148/309 (47%), Gaps = 38/309 (12%)
Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
++ A+ + DM+ P +S L + + L Q+ + + Y+Y+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENM---- 490
LIN C+ + L+ A +L+ M+ G PDI+T +L++G+C G I AV + M
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 491 -----------------------------KKVEK--KPNLVIYNSIINGLCKDASLDAAK 519
+ V K +P+LV Y ++NGLCK +D A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 520 SLLQASQRIGLLD--AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINF 577
SLL+ ++ G ++ + YNT+I+ + +A +F+EM N GI N V YN LI
Sbjct: 242 SLLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 578 LCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
LC +G + A L+ MI I P+ VT++ L+ F K E +L+D+M+ + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 638 NQTYNAIIS 646
TY+++I+
Sbjct: 361 IFTYSSLIN 369
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 6/263 (2%)
Query: 398 SILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY-NILINYLCKSNNLAAAKQLLSSMI 456
S+L KG C G +F H G Y Y I IN L L A L M+
Sbjct: 18 SLLGKGKC--GTAPPSFS-HCSFWVRDFSGVRYDYRKISINRL-NDLKLDDAVNLFGDMV 73
Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
P I+ + L+ K + + + E M+ + NL Y+ +IN C+ + L
Sbjct: 74 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 517 AAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
A ++L ++G D +T N+L+NG+ +I++A ++ +M +G + +N LI
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 576 NFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVS 635
+ L + +A L+ M++ G PD VTY +V K + + L M +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 636 PDNQTYNAIISPLLGEKSAEDQV 658
P YN II L K+ D +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDAL 276
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 268/534 (50%), Gaps = 28/534 (5%)
Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVI----QKLKVKG-------H 177
++ E ++ S + TP F+ R C+ + T+ YD++ + +++ G
Sbjct: 55 IDLFESMIQSRPL--PTPIDFN---RLCSAVARTK-QYDLVLGFCKGMELNGIEHDMYTM 108
Query: 178 SVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALS 237
++ I+ + L + +GR WKL GY + TF+ ++ C E ++ EA++
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 238 LYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIIN 297
L RM++ P++V + +IN C G + AL L +M V G P+ VT+ ++N
Sbjct: 162 LVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM-VEYG--FQPDEVTYGPVLN 218
Query: 298 GFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMP 357
CK G A ++ M + I +V Y+ +ID + GS ++AL L +EM +G+
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 358 NNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLH 417
+ V Y+S I L +G + +L +MI ++I PD T+S L + G + +A +L+
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
N+++ + D +YN LI+ CK N L A Q+ M+ +G PDI+TY LI+ YCK
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 478 GNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITY 536
++ ++++ + PN + YN+++ G C+ L+AAK L Q G+ + +TY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMIL 596
L++G NG++ +A +F +M+ + + YNI+I+ +C A L +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
G+ PD VTY ++ K S E L M G +PD+ TYN +I LG
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 4/455 (0%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L++ M+ + FN + A+ + + + L M +GI ++ ++IN C
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ L FA + + + + P+++T + ++NGFC GRV A + M++
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYE---PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
++ T +TLI+G G EAL L D MV+ G P+ V Y ++ L G+ AL +
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
M +++I YSI+ LC++G A L N++ + + D +Y+ LI LC
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
++L MI R +IPD++T+ LID + K G + A ++Y M P+ + Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
NS+I+G CK+ L A + G D +TY+ LIN Y ++ + +F E+ +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G+ N + YN L+ C+ G A+EL + M+ G+ P VTY L+ N +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+E+ + M S ++ YN II + +D
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 195/412 (47%), Gaps = 39/412 (9%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L MV G+ + T+ V+ LCK AL L+ +M + I +VV ++++I+ C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ G + AL LF +M M G + + VT++ +I G C G+ + ++ MI I
Sbjct: 257 KDGSFDDALSLFNEME-MKG--IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+V T++ LID + + G EA L +EM+ RG+ P+ + YNS I E + A +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
M+ K PD TYSIL C+ V +L ++ + ++ + +YN L+ C+S
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK------- 495
L AAK+L M+ RG+ P ++TYG L+DG C G + A++++E M+K
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 496 ----------------------------KPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
KP++V YN +I GLCK SL A L + +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 528 IGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
G D TYN LI + + + + EM+ G + + ++I+ L
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 200/391 (51%), Gaps = 5/391 (1%)
Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
L R C G + A D+ +K++ + S+ ++ + L K L+ EM G
Sbjct: 217 LNRLCKS-GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
+V T++ +I LC + K ++ + M+ I P+VV F+ +I+ + G L A
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
+L+ +M + G + P+++T+N +I+GFCK + A ++ M+ G + ++ TY+ LI
Sbjct: 336 ELYNEM-ITRG--IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
+ Y + ++ +RL E+ +GL+PN + YN+ + G + A + +M+ + +
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
P TY IL GLC NG + +A ++ ++ + M YNI+I+ +C ++ + A L
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
S+ +G+ PD++TY +I G CK G++ A ++ MK+ P+ YN +I
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLG 572
Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLIN 541
+ L ++ L++ + G D+ T +I+
Sbjct: 573 GSGLISSVELIEEMKVCGFSADSSTIKMVID 603
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 254/509 (49%), Gaps = 33/509 (6%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI +N LS + K+N+ L ++M + G ++ T+++ I C+ +L AL++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM------------------- 280
+M+K G P++V + ++N C + A+ L +M M
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 281 --SGDSVL-----------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
+ ++V P+ VT+ ++NG CK G ++ A + M K I+ +V Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
T+IDG + ++AL L EM +G+ P+ Y+S I L G A +LSDMI+
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ I P+ T+S L + G + +A KL++++++ + D ++Y+ LIN C + L
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AK + MI + P+++TY TLI G+CK +E ++++ M + N V Y ++I+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
G + D A+ + + +G+ + +TYN L++G NGK+A+A +F ++ +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
+ YNI+I +CK G + EL + L G+ P+ + Y T+++ F + S EE L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 627 DDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
M G P++ TYN +I L + E
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 244/487 (50%), Gaps = 8/487 (1%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A V+ K+ G+ I ++ L+ I L +MV GY + TF +I+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--GVMSG 282
L K EA++L +M++ G P++V + ++N C+ GD++ AL L +KM G +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
D V+ +N II+G CK ++ A + M GI +V TY++LI G +
Sbjct: 257 DVVI-----YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
A RL +M++R + PN V +++ I EG + A + +MI + I PD FTYS L
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
G C + + +A + ++ + + +Y+ LI CK+ + +L M RGL+
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
+ +TY TLI G+ + + + A V++ M V PN++ YN +++GLCK+ L A +
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
+ QR + D TYN +I G GK+ + + +F + G++ N + YN +I+ C+
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
G ++A L+K M G +P+ TY TL+ ++ E EL +M G + D T
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Query: 642 NAIISPL 648
+ + L
Sbjct: 612 GLVTNML 618
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/507 (28%), Positives = 247/507 (48%), Gaps = 42/507 (8%)
Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
N LS ++K+++ L+ +MV ++ FN ++ A+ K K E +SL +M
Sbjct: 56 NRLSDIIKVDDA---VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
GI ++ +++ IN C+ L AL + KM + + P+ VT + ++NG+C R+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE---PDIVTLSSLLNGYCHSKRI 169
Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
A + M++ G + T+ TLI G + EA+ L D+MV+RG P+ V Y +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
++ L GD++ AL +L M I D Y+ + GLC+ + A L ++ + +
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
D ++Y+ LI+ LC + A +LLS MI R + P+++T+ LID + K G + A +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL----------------------- 522
+Y+ M K P++ Y+S+ING C LD AK +
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 523 -------------QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
+ SQR + + +TY TLI+G+F A +F +M +VG+ N +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
YNIL++ LCK G +A + + + + PD TY ++ K E+ EL ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 630 VLSGVSPDNQTYNAIISPLLGEKSAED 656
L GVSP+ YN +IS + S E+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEE 556
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 208/412 (50%), Gaps = 3/412 (0%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + +V + G + A +++K++ + +N + L K +
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ EM + G +V T++ +I LC + +A L M++ I PNVV F+ +I+
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L A KL+ +M S D P+ T++ +INGFC R++ A+ + MI
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
NV TY+TLI G+ + EE + L EM +RGL+ N V Y + IH F D + A V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
M+ + P+ TY+IL GLC+NG + +A + + M D Y+YNI+I +CK
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + +L ++ ++G+ P++I Y T+I G+C+ G+ E A + + MK+ PN
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
YN++I +D +A+ L++ + G + L+ +G++ ++F
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 627
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
+ +N L++ K ++ +M+ +GI+ + Y+I IN C+ A ++
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
M+ G PD VT ++L+ + + + + L D MV G PD T+ +I L
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 654 AEDQV 658
A + V
Sbjct: 204 ASEAV 208
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 254/517 (49%), Gaps = 41/517 (7%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI +N LS + K+N+ L + M + ++ ++N++I C+ +L AL++
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCII--- 296
+M+K G P++V + ++N C + A+ L +M VM PN+VT N +I
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ---PNTVTFNTLIHGL 195
Query: 297 --------------------------------NGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
NG CK G ++ A + M K I+ +V
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
Y T+ID + +AL L EM +G+ PN V YNS I L G A +LSD
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
MI++ I P+ T+S L + G + +A KL++++++ + D ++Y+ LIN C +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
L AK + MI + P+++TY TLI G+CK +E ++++ M + N V YN+
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 505 IINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVG 563
+I GL + D A+ + + G+ D ITY+ L++G GK+ +A +F ++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 564 IAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVI 623
+ + YNI+I +CK G + +L + L G+ P+ + YTT+++ F + EE
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 624 ELHDDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
L +M G P++ TYN +I L G+K+A ++
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 224/455 (49%), Gaps = 4/455 (0%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L+ EMV + ++ FN ++ A+ K K + +SL RM I ++ +N++IN C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ L AL + KM + + P+ VT + ++NG+C R+ A + M
Sbjct: 127 RRSQLPLALAVLGKMMKLGYE---PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
N T+ TLI G + EA+ L D MV RG P+ Y + ++ L GD++ AL +L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
M I D Y+ + LC V A L ++ + + + +YN LI LC
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+ A +LLS MI R + P+++T+ LID + K G + A ++Y+ M K P++ Y
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 503 NSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
+S+ING C LD AK + + + + +TYNTLI G+ ++ E +F EM
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G+ N V YN LI L + G A+++ K M+ G+ PD +TY+ L+ K E+
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+ + + + S + PD TYN +I + ED
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 233/487 (47%), Gaps = 8/487 (1%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A V+ K+ G+ I ++ L+ I L +M Y N TFN +I+
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--GVMSG 282
L K EA++L RM+ G P++ + ++N C+ GD++ AL L +KM G +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
D V+ + II+ C V A + M GI NV TY +LI G +
Sbjct: 254 DVVI-----YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
A RL +M++R + PN V +++ I EG + A + +MI + I PD FTYS L
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
G C + + +A + ++ + + +YN LI CK+ + +L M RGL+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
+ +TY TLI G + G+ + A ++++ M P+++ Y+ +++GLCK L+ A +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 523 QASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
+ Q+ + D TYN +I G GK+ + + +F + G+ N + Y +I+ C+
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
G ++A L + M G +P+ TY TL+ ++ EL +M G D T
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Query: 642 NAIISPL 648
+ +I+ L
Sbjct: 609 SMVINML 615
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 210/413 (50%), Gaps = 5/413 (1%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + +V + G + A +++K++ + + + L +
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ EM + G NV T+N +I LC + +A L M++ I PNVV F+ +I+
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L A KL+ +M S D P+ T++ +INGFC R++ A+ + MI
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSID---PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
NV TY TLI G+ + EE + L EM +RGL+ N V YN+ I LF GD + A +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
M+ + PD TYSIL GLC+ G +++A + + + M D Y+YNI+I +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + L S+ ++G+ P++I Y T+I G+C+ G E A ++ MK+ PN
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAF 553
YN++I +D A+ L++ + G + DA T + +IN +G++ +++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 624
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 174/365 (47%), Gaps = 25/365 (6%)
Query: 77 ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLL 136
AL +T + +N ++ + +++ L N+ R+ DA L+ +++
Sbjct: 274 ALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER------------- 319
Query: 137 DSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKL 194
K P V F AL+ A + G A + ++ + I +++ ++
Sbjct: 320 ------KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 195 NEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCF 254
+ + +++ M+S NV T+N +I CK ++EE + L+ M + G+ N V +
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 255 NMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
N +I Q GD + A K+F+KM D V P+ +T++ +++G CK G++E A +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKM---VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
+ K+ ++ ++ TY +I+G + G E+ L + +G+ PN ++Y + I +G
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
E A + +M + P+ TY+ L + R+G + +L ++ VGDA + ++
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610
Query: 435 LINYL 439
+IN L
Sbjct: 611 VINML 615
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 512 DASLDAAKSLL-QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
D LD A L + Q L + +N L++ K ++ M+N+ I+ +
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
YNILIN C+ A ++ M+ G PD VT ++L+ + E + L D M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
+ P+ T+N +I L A + V
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAV 205
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 262/540 (48%), Gaps = 27/540 (5%)
Query: 51 LEQMAPSLTNSLVNRVVSEFRKSP-----KLALEFYTWVGENNRFSHSLESSCAIVHLLV 105
+ ++ PSL+ V+ VV +P + F+ ++ F ++E+ + L
Sbjct: 73 IRKVLPSLS---VHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLA 129
Query: 106 NWRRFDDALLLMGNLMS---ANSVSPLEFLEGLLDSYEICKATPA---VFDALVRACTQI 159
F +A L+ ++S NS S + S + TP + DAL+ T +
Sbjct: 130 VHEMFTEAQSLIELVVSRKGKNSAS------SVFISLVEMRVTPMCGFLVDALMITYTDL 183
Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
G A + + V I N L ++KLN G W Y E++ G+ NV F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243
Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
N+++ CKE + +A ++ + K + P VV FN +IN C+VG+L+ +L +M
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM-- 301
Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
P+ T++ +IN CK +++ A + M K G+ N + TLI G++R G
Sbjct: 302 -EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
+ +M+ +GL P+ V+YN+ ++ GD+ A ++ MI + + PD TY+
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
L G CR G V+ A ++ ++ + + D ++ L+ +CK + A++ L M+ G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
+ PD +TY ++D +CK G+ + ++ + M+ P++V YN ++NGLCK + A
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
LL A IG++ D ITYNTL+ G+ + ++ + E +GI + Y ++N L
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPE---IGIVADLASYKSIVNEL 597
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 209/378 (55%), Gaps = 9/378 (2%)
Query: 283 DSVLP-NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE 341
D+ P N N ++N FCK G + A+++ + K + V ++ TLI+GY + G+ +
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
E RL +M K P+ Y++ I+ L E ++GA + +M + + P+ ++ L
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
G RNG + + + ++L + + D YN L+N CK+ +L AA+ ++ MI RGL
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
PD ITY TLIDG+C+GG++E A+++ + M + + + V +++++ G+CK+ + A+
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 522 LQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
L+ R G+ D +TY +++ + G F + EM++ G + V YN+L+N LCK
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCK 532
Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNC-SPEEVIELHDDMVLSGVSPDNQ 639
G + A L+ M+ G++PD +TY TL+ ++ S + I+ + G+ D
Sbjct: 533 LGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPE----IGIVADLA 588
Query: 640 TYNAIISPLLGEKSAEDQ 657
+Y +I++ L +++++D
Sbjct: 589 SYKSIVNEL--DRASKDH 604
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 131/228 (57%), Gaps = 1/228 (0%)
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
++L+ + Y +NIL+N CK N++ A+++ + R L P ++++ TLI+GYCK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
N++ ++ M+K +P++ Y+++IN LCK+ +D A L + GL+ + + +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
TLI+G+ NG+I + +M + G+ + V YN L+N CK G AR ++ MI
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
G+ PD +TYTTL+ F + E +E+ +M +G+ D ++A++
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTR 612
+ + E+ + G +N +NIL+N CK G A+++ + + P V++ TL+
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 613 FSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
+ K + +E L M S PD TY+A+I+ L E +
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 258/518 (49%), Gaps = 6/518 (1%)
Query: 60 NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGN 119
N L +++S P L L +Y+W+ +N+ S SLE + ++H L N +R+ +
Sbjct: 68 NELFRQLISS-ELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDG 126
Query: 120 LMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSV 179
+ S + + + + + D LV A E ++ ++ G+ +
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
S + + L+K N +YKEM+ NV TFN+VI ALCK K+ +A +
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
M G PNVV +N +I+ C++G K + M + V PN T N +I+GF
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306
Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
K + + ++ M+ + NV +Y +LI+G GG EA+ + D+MV G+ PN
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366
Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
+ YN+ I+ ++ AL + + + P Y++L C+ G + F L +
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
+ E +V D +YN LI LC++ N+ AAK+L + +GL PD++T+ L++GYC+ G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA---KSLLQASQRIGLLDAITY 536
A + + M K+ KP + YN ++ G CK+ +L AA ++ ++ +R+ ++ +Y
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL-RMNVASY 544
Query: 537 NTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
N L+ GY GK+ +A + +EM G+ N++ Y I+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 194/376 (51%), Gaps = 4/376 (1%)
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR-GGSSE-- 341
+ PN T N +IN CK G++ A ++ M G NV +Y TLIDGY + GG+ +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 342 EALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILT 401
+A + EMV+ + PN +N I + + ++ G++ V +M+D+ + P+ +Y+ L
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 402 KGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLI 461
GLC G + +A + ++++ + + +YN LIN CK++ L A + S+ +G +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 462 PDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSL 521
P Y LID YCK G I+ + E M++ P++ YN +I GLC++ +++AAK L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 522 LQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
GL D +T++ L+ GY G+ +A + EM +G+ + YNI++ CK
Sbjct: 459 FDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 582 GCYQQARELMKVMILHGIIP-DYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
G + A + M + + +Y L+ +S+ E+ L ++M+ G+ P+ T
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 641 YNAIISPLLGEKSAED 656
Y + ++ + D
Sbjct: 579 YEIVKEEMVDQGFVPD 594
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL--QASQ 526
+ +DG+ + G+ ++ + + V NSII + A + ++ L +A +
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDN----VCVNSIIADMLVLAYANNSRFELGFEAFK 177
Query: 527 RIGL----LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
R G L A++ L+ + A+ ++ EM I N +N++IN LCK G
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237
Query: 583 CYQQARELMKVMILHGIIPDYVTYTTLVTRFSK---NCSPEEVIELHDDMVLSGVSPDNQ 639
+AR++M+ M ++G P+ V+Y TL+ + K N + + +MV + VSP+
Sbjct: 238 KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297
Query: 640 TYNAII 645
T+N +I
Sbjct: 298 TFNILI 303
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 248/514 (48%), Gaps = 35/514 (6%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI +N LS + K+ + L ++M G N+ T+N++I C+ ++ AL+L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
+M+K G P++V + ++N C + A+ L +M M D++
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
PN VT+ ++NG CK G ++ A + M A I+ +V +
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
T+ID + ++AL L EM +G+ PN V Y+S I L + G A +LSDMI+
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
K I P+ T++ L + G +A KLH+ +++ + D ++YN LIN C + L
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AKQ+ M+ + PD+ TY TLI G+CK +E +++ M + V Y ++I
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
GL D D A+ + + G+ D +TY+ L++G NGK+ +A +F M+ I +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
+ Y +I +CK G +L + L G+ P+ VTY T+++ +E L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
M G PD+ TYN +I L G+K+A ++
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/535 (27%), Positives = 258/535 (48%), Gaps = 26/535 (4%)
Query: 64 NRVVSEFRKSPKLALEFYTWVGENNR---FSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
N+++S K K L +GE + SH+L + +++ + AL L+G +
Sbjct: 14 NKLLSAIAKMKKFDL--VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
M + L LL+ Y C + DA+ ++ ++ G+
Sbjct: 72 MKLGYEPSIVTLSSLLNGY--CHG-KRISDAVA--------------LVDQMVEMGYRPD 114
Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
+ + L N+ L MV G N+ T+ +V+ LCK ++ A +L
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
+M + I +VV FN II+ C+ ++ AL LF++M + PN VT++ +I+ C
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM---ETKGIRPNVVTYSSLISCLC 231
Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
GR A ++ MI+ I+ N+ T+ LID + + G EA +L D+M+KR + P+
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
YNS I+ ++ A + M+ K PD TY+ L KG C++ V+ +L ++
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
+VGD +Y LI L + A+++ M+ G+ PDI+TY L+DG C G +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTL 539
E A++V++ M+K E K ++ IY ++I G+CK +D L + G+ + +TYNT+
Sbjct: 412 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Query: 540 INGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
I+G + EA+A+ +M+ G + YN LI + G + EL++ M
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 226/451 (50%), Gaps = 4/451 (0%)
Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
MV + ++ FN ++ A+ K K + +SL +M + GI N+ +N++IN C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
+ AL L KM + + P+ VT + ++NG+C R+ A + M++ G + T
Sbjct: 61 ISLALALLGKMMKLGYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
+ TLI G + EA+ L D MV+RG PN V Y ++ L GD++ A +L+ M
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
I D ++ + LC+ V A L ++ + + + +Y+ LI+ LC +
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
A QLLS MI + + P+++T+ LID + K G A +++++M K P++ YNS+I
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 507 NGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
NG C LD AK + + + D TYNTLI G+ + ++ + +F EM + G+
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
+ V Y LI L G A+++ K M+ G+ PD +TY+ L+ N E+ +E+
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
D M S + D Y +I + +D
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 203/412 (49%), Gaps = 3/412 (0%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + +V + G + A++++ K++ + +N + L K +
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+KEM + G NV T++ +I LC + +A L M++ I PN+V FN +I+
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G A KL M S D P+ T+N +INGFC R++ A+++ M+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSID---PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
++ TY TLI G+ + E+ L EM RGL+ + V Y + I LF +GD + A V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
M+ + PD TYSIL GLC NG +++A ++ + + + + D Y Y +I +CK
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + L S+ ++G+ P+++TY T+I G C ++ A + + MK+ P+
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
YN++I +D A+ L++ + + + L+ +G++ ++F
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 554
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/522 (28%), Positives = 261/522 (50%), Gaps = 12/522 (2%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
+ P V D R + I T+ YD++ +++++KG + +++ + ++ + ++
Sbjct: 83 RPLPTVID-FSRLFSAIAKTK-QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 140
Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
+ +++ GY N TF+ +I LC E ++ EAL L RM++ G P+++ N ++
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLV 200
Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
N C G A+ L KM V G PN+VT+ ++N CK G+ A E+ M +
Sbjct: 201 NGLCLSGKEAEAMLLIDKM-VEYG--CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
I + Y+ +IDG + GS + A L +EM +G+ N + YN I G +
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
+L DMI + I P+ T+S+L + G +++A +LH +++ + D +Y LI+
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
CK N+L A Q++ M+ +G P+I T+ LI+GYCK I+ ++++ M +
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 499 LVIYNSIINGLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMF 556
V YN++I G C+ L+ AK L Q S+++ + +TY L++G NG+ +A +F
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP-NIVTYKILLDGLCDNGESEKALEIF 496
Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
++ + ++ YNI+I+ +C A +L + L G+ P TY ++ K
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
E L M G +PD TYN +I LG+ A V
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 228/455 (50%), Gaps = 4/455 (0%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L+++M+ + V F+ + A+ K + + L+L +M GI N+ +++IN C
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ L A F MG + PN++T + +ING C GRV A E+ M++ G
Sbjct: 135 RCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
++ T TL++G G EA+ L D+MV+ G PN V Y ++ + G A+ +L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
M +++I D YSI+ GLC++G + AF L N++ + + + +YNILI C +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+LL MI R + P+++T+ LID + K G + A ++++ M P+ + Y
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
S+I+G CK+ LD A ++ G I T+N LINGY +I + +F +M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G+ + V YN LI C+ G A+EL + M+ + P+ VTY L+ N E+
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+E+ + + S + D YN II + +D
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 243/485 (50%), Gaps = 4/485 (0%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A+ + K+ G+ + ++ ++ L + +L MV G+ ++ T N ++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
LC K EA+ L +M++ G PN V + ++N C+ G A++L RKM +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERN 258
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
+ ++V ++ II+G CK G ++ A + M GI N+ TY LI G+ G ++
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
+L +M+KR + PN V ++ I EG + A + +MI + I PD TY+ L G
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
C+ + +A ++ + ++ + + ++NILIN CK+N + +L M +RG++ D
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
+TY TLI G+C+ G + A ++++ M + PN+V Y +++GLC + + A + +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
++ + LD YN +I+G K+ +A+ +F + G+ YNI+I LCK G
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
+A L + M G PD TY L+ + + ++L +++ G S D T
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 644 IISPL 648
+I L
Sbjct: 619 VIDML 623
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 212/413 (51%), Gaps = 5/413 (1%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + ++ + G T A ++++K++ + + ++ + L K + +
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ EM G N+ T+N++I C + ++ L M+K I PNVV F+++I+
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L A +L ++M + G + P+++T+ +I+GFCK ++ A ++ M+ G D
Sbjct: 344 VKEGKLREAEELHKEM-IHRG--IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
N+RT+ LI+GY + ++ L L +M RG++ + V YN+ I G + A +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
+M+ + + P+ TY IL GLC NG ++A ++ ++ + M D YNI+I+ +C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
++ + A L S+ ++G+ P + TY +I G CK G + A ++ M++ P+
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
YN +I D + L++ +R G +DA T +I+ +G++ ++F
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 1/313 (0%)
Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
+++A+ L +M+ +P + ++ + + L + M K I + +T SI
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
+ CR + AF ++++ + +++ LIN LC ++ A +L+ M+ G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
PD+IT TL++G C G A+ + + M + +PN V Y ++N +CK A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 520 SLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
LL+ + + LDA+ Y+ +I+G +G + AF +F+EM GI N + YNILI
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
C G + +L++ MI I P+ VT++ L+ F K E ELH +M+ G++PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 639 QTYNAIISPLLGE 651
TY ++I E
Sbjct: 369 ITYTSLIDGFCKE 381
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 252/501 (50%), Gaps = 23/501 (4%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A + +K++++ ++I+++N + +++ + ++ G+ +V TFN +++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 225 ALCKECKLEEALSLYYRMLKSG---------------IWPNVVCFNMIINEACQVGDLEF 269
LC E ++ EAL+L+ M+++G + P V+ FN +IN C G +
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
A L KM G + + VT+ I+NG CK+G + A + M + I +V Y+
Sbjct: 245 AAALVNKM---VGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
+ID + G +A L EM+++G+ PN YN I + G A +L DMI++
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
I PD T++ L + G + +A KL +++L + D +YN +I CK N AK
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
+ M PD++T+ T+ID YC+ ++ +Q+ + + N YN++I+G
Sbjct: 422 HMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 510 CKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNK 568
C+ +L+AA+ L Q G+ D IT N L+ G+ N K+ EA +F ++ I ++
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDD 628
V YNI+I+ +CK +A +L + +HG+ PD TY +++ F + + L
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 629 MVLSGVSPDNQTYNAIISPLL 649
M +G PDN TYN +I L
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCL 618
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 246/485 (50%), Gaps = 17/485 (3%)
Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
N + V++N LY++M N+ +FN++I C KL +LS + ++ K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKM---GVMSGDSVL---------PNSVTH 292
G P+VV FN +++ C + AL LF M G + ++ P +T
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
N +ING C GRV A + M+ G+ +V TY T+++G + G ++ AL L +M +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
+ P+ V+Y++ I L +G A ++ S+M++K I P+ FTY+ + G C G
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
A +L ++E + D ++N LI+ K L A++L M+ R + PD +TY ++I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL- 531
G+CK + A +++ M P++V +N+II+ C+ +D LL+ R GL+
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
+ TYNTLI+G+ + A +F EM + G+ + + NIL+ C+ ++A EL
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
+V+ + I D V Y ++ K +E +L + + GV PD QTYN +IS G+
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 652 KSAED 656
+ D
Sbjct: 586 SAISD 590
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 220/443 (49%), Gaps = 8/443 (1%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L+ +MV G V TFN +I LC E ++ EA +L +M+ G+ +VV + I+N C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
++GD + AL L KM + P+ V ++ II+ CK G A+ + M++ GI
Sbjct: 273 KMGDTKSALNLLSKM---EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
NV TY +IDG+ G +A RL +M++R + P+ + +N+ I EG + A +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
+M+ + I PD TY+ + G C++ F + + D ++N +I+ C++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKH----NRFDDAKHMFDLMASPDVVTFNTIIDVYCRA 445
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+ QLL + RGL+ + TY TLI G+C+ N+ A +++ M P+ +
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
N ++ G C++ L+ A L + Q + LD + YN +I+G K+ EA+ +F +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G+ + YN++I+ C A L M +G PD TY TL+ K ++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 622 VIELHDDMVLSGVSPDNQTYNAI 644
IEL +M +G S D T +
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMV 648
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 201/408 (49%), Gaps = 9/408 (2%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
+ +V ++G T+ A +++ K++ + ++ + L K L+ EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
+ G NV T+N +I C + +A L M++ I P+V+ FN +I+ + + G L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
A KL +M + P++VT+N +I GFCK R + A+ + M +V T+
Sbjct: 383 FEAEKLCDEM---LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTF 435
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
T+ID Y R +E ++L E+ +RGL+ N YN+ IH ++ A + +MI
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+CPD T +IL G C N +++A +L + + D +YNI+I+ +CK + +
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
A L S+ + G+ PD+ TY +I G+C I A ++ MK +P+ YN++I
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFA 554
G K +D + L+ + G DA T ++ +G++ ++F+
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSFS 662
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 114/234 (48%), Gaps = 16/234 (6%)
Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
A N +I + N A L M +R + +I ++ LI +C + ++ +
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA--------------- 533
+ K+ +P++V +N++++GLC + + A +L G L+A
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 534 -ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMK 592
IT+NTLING + G++ EA A+ ++M G+ ++ V Y ++N +CK G + A L+
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 593 VMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
M I PD V Y+ ++ R K+ + L +M+ G++P+ TYN +I
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/485 (30%), Positives = 253/485 (52%), Gaps = 8/485 (1%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A ++++++ + ++N + + E+ + +L EM G ++ T+ ++I
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
A CK K++EA+ M G+ ++V + +I C G+L+ LF ++ + GDS
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDS 279
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
P ++T+N +I GFCKLG+++ A EI MI+ G+ NV TY LIDG G ++EAL
Sbjct: 280 --PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
+L + M+++ PN V YN I+ L +G V A+ ++ M + PD+ TY+IL GL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 405 CRNGCVKQAFKLHNQVLEE--HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
C G + +A KL +L++ + D SYN LI+ LCK N L A + ++ +
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
D +T L++ K G++ A+++++ + + N Y ++I+G CK L+ AK LL
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 523 QASQRIGLLD--AITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCK 580
R+ L YN L++ G + +A+ +F EM+ + V +NI+I+ K
Sbjct: 518 -CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 581 FGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
G + A L+ M G+ PD TY+ L+ RF K +E I D MV SG PD
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
Query: 641 YNAII 645
++++
Sbjct: 637 CDSVL 641
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 251/525 (47%), Gaps = 41/525 (7%)
Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
E A+ +K+ ++ + + L V++ + G + + M+ G+ NV N++
Sbjct: 89 ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
+ LC+ + +A+SL M ++ + P+V +N +I C+ +LE AL+L +M G
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM---KG 205
Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
+ VT +I+ FCK G+++ A M G++ ++ Y +LI G+ G +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
L DE+++RG P + YN+ I G ++ A + MI++ + P+ +TY+ L
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
GLC G K+A +L N ++E+ +A +YNI+IN LCK +A A +++ M R P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEK--KPNLVIYNSIINGLCKDASLDAAKS 520
D ITY L+ G C G+++ A ++ M K P+++ YN++I+GLCK+ L A
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 521 LLQA-SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN------------ 567
+ +++G D +T N L+N G + +A ++ ++ + I N
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 568 KVG-----------------------YNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
K G YN L++ LCK G QA L + M PD V
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
++ ++ K + L M +G+SPD TY+ +I+ L
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 157/627 (25%), Positives = 289/627 (46%), Gaps = 46/627 (7%)
Query: 16 LSRAFHVGKQFANP----------STEDIVFRAICVNLR---QRKWKILEQMAPSLT--- 59
L R HV ++ NP S + R++C + + + +Q S +
Sbjct: 13 LRRDEHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLA 72
Query: 60 ---NSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRR----FDD 112
N+L+ ++V ++ +LA FY + E + F + + S ++ V R+ F
Sbjct: 73 FAGNNLMAKLVRS--RNHELAFSFYRKMLETDTFINFVSLS-GLLECYVQMRKTGFAFGV 129
Query: 113 ALLLMGNLMSANSVSPLEFLEGLLDSYEICKAT------------PAVF--DALVRACTQ 158
L++ + N + L+GL + E KA P VF + ++R +
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
E A ++ ++K G S S+ W + K ++ KEM G ++
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
+ +I C +L+ +L+ +L+ G P + +N +I C++G L+ A ++F
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE--- 306
Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
M V PN T+ +I+G C +G+ + A ++ MI+ + N TY +I+ + G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI--DKHICPDHFT 396
+A+ + + M KR P+N+ YN + L A+GD++ A +L M+ + PD +
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426
Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
Y+ L GLC+ + QA +++ ++E+ GD + NIL+N K+ ++ A +L +
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
++ + TY +IDG+CK G + A + M+ E +P++ YN +++ LCK+ SLD
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546
Query: 517 AAKSLLQASQRI-GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILI 575
A L + QR D +++N +I+G G I A ++ M G++ + Y+ LI
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 576 NFLCKFGCYQQARELMKVMILHGIIPD 602
N K G +A M+ G PD
Sbjct: 607 NRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 227/464 (48%), Gaps = 6/464 (1%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C + + L+ A + G + A ++++K G + + + + E+ R
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ E++ G T+N +I CK +L+EA ++ M++ G+ PNV + +I+
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
C VG + AL+L + +M PN+VT+N IIN CK G V A EI M K
Sbjct: 328 CGVGKTKEALQL---LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRG--LMPNNVVYNSTIHWLFAEGDVEGAL 379
+ TY L+ G G +EA +L M+K P+ + YN+ IH L E + AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
+ +++K D T +IL + G V +A +L Q+ + +V ++ +Y +I+
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
CK+ L AK LL M V L P + Y L+ CK G+++ A +++E M++ P++
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
V +N +I+G K + +A+SLL R GL D TY+ LIN + G + EA + F +
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
M + G + + ++ + G + EL+K ++ I+ D
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 240/496 (48%), Gaps = 7/496 (1%)
Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
+ A V Q+ G S++ A NN ++ LV+ + Y++M+ N + + +
Sbjct: 55 KNAVSVFQQAVDSGSSLAF-AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGL 113
Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
+ + K A + MLK G NV N+++ C+ + A+ L R+M
Sbjct: 114 LECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM---RR 170
Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
+S++P+ ++N +I GFC+ +E A E+ M +G ++ T+ LID + + G +E
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
A+ EM GL + VVY S I G+++ + +++++ P TY+ L +
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
G C+ G +K+A ++ ++E + + Y+Y LI+ LC A QLL+ MI + P
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
+ +TY +I+ CK G + AV++ E MKK +P+ + YN ++ GLC LD A LL
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 523 QASQRIGLL---DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
+ D I+YN LI+G ++ +A ++ + A ++V NIL+N
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
K G +A EL K + I+ + TYT ++ F K L M +S + P
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 640 TYNAIISPLLGEKSAE 655
YN ++S L E S +
Sbjct: 531 DYNCLLSSLCKEGSLD 546
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
AF + +L+ + Y++NIL+ LC++ A LL M L+PD+ +Y T+I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
G+C+G +E A+++ MK +LV + +I+ CK +D A L+ + +GL
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
D + Y +LI G+ G++ A+F E+ G + + YN LI CK G ++A E+
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
+ MI G+ P+ TYT L+ +E ++L + M+ P+ TYN II+ L +
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 652 KSAEDQV 658
D V
Sbjct: 366 GLVADAV 372
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 159/330 (48%), Gaps = 5/330 (1%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL-YKE 206
++ ++ + G A ++++ +K + +N L L ++ KL Y
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 207 MVSCGYVE-NVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
+ Y + +V ++N +I+ LCKE +L +AL +Y +++ + V N+++N + G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
D+ A++L++++ S ++ NS T+ +I+GFCK G + A+ + M + + +V
Sbjct: 474 DVNKAMELWKQI---SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
Y L+ + GS ++A RL +EM + P+ V +N I GD++ A +L M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
+ PD FTYS L + G + +A +++++ DA+ + ++ Y
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
+L+ ++ + ++ D T++D C
Sbjct: 651 DKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 247/490 (50%), Gaps = 6/490 (1%)
Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
D+ +++++KG + +++ + ++ + ++ + +++ GY + TF+ +I L
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
C E ++ EAL L RM++ G P ++ N ++N C G + A+ L +M V +G
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETG--FQ 209
Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
PN VT+ ++ CK G+ A E+ M + I + Y+ +IDG + GS + A L
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
+EM +G + ++Y + I G + +L DMI + I PD +S L +
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
G +++A +LH ++++ + D +Y LI+ CK N L A +L M+ +G P+I T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ--A 524
+ LI+GYCK I+ ++++ M + V YN++I G C+ L+ AK L Q
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 525 SQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCY 584
S+R+ D ++Y L++G NG+ +A +F ++ + ++ YNI+I+ +C
Sbjct: 450 SRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 585 QQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
A +L + L G+ PD TY ++ K S E L M G SP+ TYN +
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 645 ISPLLGEKSA 654
I LGE A
Sbjct: 569 IRAHLGEGDA 578
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 216/455 (47%), Gaps = 4/455 (0%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L++EM + F+ + + + + + L L +M GI N+ +++IN C
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ L A F MG + P++VT + +ING C GRV A E+ M++ G
Sbjct: 119 RCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+ T L++G G +A+ L D MV+ G PN V Y + + G A+ +L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
M ++ I D YSI+ GLC++G + AF L N++ + D Y LI C +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+LL MI R + PD++ + LID + K G + A ++++ M + P+ V Y
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRN 561
S+I+G CK+ LD A +L G I T+N LINGY I + +F +M
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G+ + V YN LI C+ G + A+EL + M+ + PD V+Y L+ N PE+
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+E+ + + S + D YN II + +D
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 244/498 (48%), Gaps = 4/498 (0%)
Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
++ C + A+ + K+ G+ ++ ++ L + +L MV G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
+ + T N ++ LC K+ +A+ L RM+++G PN V + ++ C+ G A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
+L RK M + ++V ++ II+G CK G ++ A + M G ++ Y TLI
Sbjct: 233 ELLRK---MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
G+ G ++ +L +M+KR + P+ V +++ I EG + A + +MI + I
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
PD TY+ L G C+ + +A + + ++ + + ++NILIN CK+N + +L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCK 511
M +RG++ D +TY TLI G+C+ G +E A ++++ M +P++V Y +++GLC
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 512 DASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
+ + A + + ++ + LD YN +I+G K+ +A+ +F + G+ +
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
YNI+I LCK G +A L + M G P+ TY L+ + +L +++
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Query: 631 LSGVSPDNQTYNAIISPL 648
G S D T ++ L
Sbjct: 590 RCGFSVDASTVKMVVDML 607
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 228/468 (48%), Gaps = 4/468 (0%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
F L+ G A +++ ++ GH ++ N ++ L ++ L M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
V G+ N T+ V+ +CK + A+ L +M + I + V +++II+ C+ G L
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
+ A LF +M + + + + + +I GFC GR + ++ MIK I +V +
Sbjct: 264 DNAFNLFNEMEIKGFKA---DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
+ LID + + G EA L EM++RG+ P+ V Y S I E ++ A +L M+
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
K P+ T++IL G C+ + +L ++ +V D +YN LI C+ L
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AK+L M+ R + PDI++Y L+DG C G E A++++E ++K + + ++ IYN II+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
G+C + +D A L + G+ D TYN +I G G ++EA +F +M G +
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
N YNILI G ++ +L++ + G D T +V S
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 233/487 (47%), Gaps = 4/487 (0%)
Query: 163 EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLV 222
+ A D+ Q++ + ++ S + + + L K+M G N+ T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 223 IYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG 282
I C+ KL A S +++K G P+ V F+ +IN C G + AL+L +M M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 283 DSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEE 342
P +T N ++NG C G+V A + M++ G N TY ++ + G +
Sbjct: 174 K---PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 343 ALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTK 402
A+ L +M +R + + V Y+ I L +G ++ A + ++M K D Y+ L +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIP 462
G C G KL +++ + D +++ LI+ K L A++L MI RG+ P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 463 DIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL 522
D +TY +LIDG+CK ++ A + + M PN+ +N +ING CK +D L
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 523 QASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKF 581
+ G++ D +TYNTLI G+ GK+ A +F EM + + + V Y IL++ LC
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 582 GCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
G ++A E+ + + + D Y ++ ++ +L + L GV PD +TY
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 642 NAIISPL 648
N +I L
Sbjct: 531 NIMIGGL 537
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 210/407 (51%), Gaps = 5/407 (1%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
+ +++ + G T A ++++K++ + + ++ + L K + + L+ EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
G+ ++ + +I C + ++ L M+K I P+VV F+ +I+ + G L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
A +L ++M + G S P++VT+ +I+GFCK +++ A + M+ G N+RT+
Sbjct: 334 REAEELHKEM-IQRGIS--PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
LI+GY + ++ L L +M RG++ + V YN+ I G +E A + +M+
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ + PD +Y IL GLC NG ++A ++ ++ + M D YNI+I+ +C ++ +
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
A L S+ ++G+ PD+ TY +I G CK G++ A ++ M++ PN YN +I
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 508 GLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
+ + L++ +R G +DA T +++ +G++ ++F
Sbjct: 571 AHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD-MLSDGRLKKSF 616
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 169/335 (50%), Gaps = 3/335 (0%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
KA ++ L+R G + +++ + + + + A++ + VK ++ +
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L+KEM+ G + T+ +I CKE +L++A + M+ G PN+ FN++IN C
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ ++ L+LFRKM + V+ ++VT+N +I GFC+LG++E A+E+ M+ +
Sbjct: 399 KANLIDDGLELFRKMSLR---GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
++ +Y L+DG G E+AL + +++ K + + +YN IH + V+ A +
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
+ K + PD TY+I+ GLC+ G + +A L ++ E+ + +YNILI
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
+ + +L+ + G D T ++D G
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 13/345 (3%)
Query: 320 IDCNVRTYATLIDGYA--------RGG----SSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
+ C R ++++ DG R G ++A+ L EM + P + ++
Sbjct: 21 LSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS 80
Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
+ + L + M K I + +T SI+ CR + AF ++++
Sbjct: 81 VVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140
Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
D +++ LIN LC ++ A +L+ M+ G P +IT L++G C G + AV +
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYNTLINGYFIN 546
+ M + +PN V Y ++ +CK A LL+ +R LDA+ Y+ +I+G +
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
G + AF +F+EM G + + Y LI C G + +L++ MI I PD V +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
+ L+ F K E ELH +M+ G+SPD TY ++I E
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C F+ L+ + + ++ +K+ ++G +N + +L ++
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
+L++EMVS ++ ++ +++ LC + E+AL ++ ++ KS + ++ +N+II+
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
C ++ A LF + + V P+ T+N +I G CK G + A+ + M + G
Sbjct: 503 CNASKVDDAWDLFCSLPL---KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
N TY LI + G + ++ +L +E+ + G
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 511 KDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVG 570
+D ++D + + ++ R L+D ++ L + + + +M GIA N
Sbjct: 53 EDDAVDLFQEMTRSRPRPRLID---FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 571 YNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMV 630
+I+IN C+ A M +I G PD VT++TL+ E +EL D MV
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 631 LSGVSPDNQTYNAIISPLLGEKSAEDQV 658
G P T NA+++ L D V
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAV 197
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 175/625 (28%), Positives = 290/625 (46%), Gaps = 68/625 (10%)
Query: 75 KLALEFYTWVGENNR---FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
++ ++ + W+ + FS+ S + + LL +R F++ ++GNL + N E
Sbjct: 78 EIGVKLFDWLSSEKKDEFFSNGFACS-SFLKLLARYRIFNEIEDVLGNLRNENVKLTHEA 136
Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
L +L +Y A +L +A YD + + A N+ LS L
Sbjct: 137 LSHVLHAY-------AESGSLSKAVEIYDYVVELYDSVP---------DVIACNSLLSLL 180
Query: 192 VKLNEIGRFWKLYKEMVSCG-YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPN 250
VK +G K+Y EM G V+N +T +++ +C E K+E L G PN
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPN 239
Query: 251 VVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG------- 303
+V +N II C++GD+E A +F+++ + +P T +INGFCK G
Sbjct: 240 IVFYNTIIGGYCKLGDIENAYLVFKELKL---KGFMPTLETFGTMINGFCKEGDFVASDR 296
Query: 304 -----------------------------RVEFAEEIRYAMIKAGIDC--NVRTYATLID 332
+V+ AE I + + DC +V TY LI+
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN---DCKPDVATYNILIN 353
Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
+ G E A+ DE K+GL+PNN+ Y I + + A +L M ++ P
Sbjct: 354 RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKP 413
Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
D TY IL GL +G + A + ++++ + DA YN+L++ LCK+ AK L
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
S M+ R ++PD Y TLIDG+ + G+ + A +V+ + K ++V +N++I G C+
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 513 ASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
LD A + + L+ D TY+T+I+GY +A A +F M N V Y
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP-EEVIELHDDMV 630
LIN C G ++ A E K M L ++P+ VTYTTL+ +K S E+ + + M+
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653
Query: 631 LSGVSPDNQTYNAIISPLLGEKSAE 655
+ P+ T+N ++ + + S +
Sbjct: 654 TNKCVPNEVTFNCLLQGFVKKTSGK 678
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 152/644 (23%), Positives = 273/644 (42%), Gaps = 108/644 (16%)
Query: 58 LTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALL 115
LT+ ++ V+ + +S L A+E Y +V E + + +++ LLV RR DA
Sbjct: 132 LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARK 191
Query: 116 LMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVK 175
+ + +D+Y C LV+ G E +I+ K
Sbjct: 192 VYDEMCDRGDS---------VDNYSTC--------ILVKGMCNEGKVEVGRKLIEGRWGK 234
Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
G +I +N + KL +I + ++KE+ G++ + TF +I CKE +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 236 LSLYY----RMLKSGIW-------------------------------PNVVCFNMIINE 260
L R L+ +W P+V +N++IN
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 261 ACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGI 320
C+ G E A+ + S ++PN++++ +I +CK + A ++ M + G
Sbjct: 355 LCKEGKKEVAVGFLDEA---SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 321 DCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALF 380
++ TY LI G G ++A+ + +++ RG+ P+ +YN + L G A
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 381 VLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLC 440
+ S+M+D++I PD + Y+ L G R+G +A K+ + +E+ + D +N +I C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 441 KSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLV 500
+S L A ++ M L+PD TY T+IDGY K ++ A++++ M+K + KPN+V
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 501 IYNSIINGLCKDASLDAAKSLLQASQRIGLL----------------------------- 531
Y S+ING C A+ + Q L+
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Query: 532 --------DAITYNTLINGYF--INGKI-AEA-------FAMFSE----MRNVGIAVNKV 569
+ +T+N L+ G+ +GK+ AE ++FSE M++ G + +
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAA 711
Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRF 613
YN + LC G + A M+ G PD V++ ++ F
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 166/397 (41%), Gaps = 35/397 (8%)
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
++ D+E +KLF + D N + + + E++ + +
Sbjct: 73 RIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKL 132
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+ ++ YA GS +A+ + D +V+ +Y+S
Sbjct: 133 THEALSHVLHAYAESGSLSKAVEIYDYVVE--------LYDSV----------------- 167
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
PD + L L ++ + A K+++++ + D YS IL+ +C
Sbjct: 168 ---------PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNE 218
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+ ++L+ +G IP+I+ Y T+I GYCK G+IE A V++ +K P L +
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAITY-NTLINGYFINGKIAEAFAMFSEMRN 561
++ING CK+ A+ LL + GL ++ + N +I+ + +G + +
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
+ YNILIN LCK G + A + G+IP+ ++Y L+ + K+ +
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
+L M G PD TY +I L+ +D V
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 26/357 (7%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
CK + L+ G + A ++ KL +G S +N +S L K GRF
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK---TGRFL 467
Query: 202 K---LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
L+ EM+ + + + +I + +EA ++ ++ G+ +VV N +I
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
C+ G L+ AL M M+ + ++P+ T++ II+G+ K + A +I M K
Sbjct: 528 KGFCRSGMLDEALAC---MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD-VEG 377
NV TY +LI+G+ G + A EM R L+PN V Y + I L E +E
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK 644
Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCR----------NGCVKQAFKLHNQVLEEHMVG 427
A++ M+ P+ T++ L +G + +G L ++ M
Sbjct: 645 AVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFH-RMKS 703
Query: 428 DAYS-----YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
D +S YN + LC + A M+ +G PD +++ ++ G+C GN
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 119/309 (38%), Gaps = 68/309 (22%)
Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
+ + + ++ + K++ V G +V N +I C+ L+EAL+ R
Sbjct: 486 YVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545
Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
M + + P+ ++ II+ + D+ A+K+FR M + PN VT+ +INGFC
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR---YMEKNKCKPNVVTYTSLINGFCC 602
Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS-EEALRLCDEMVKRGLMPNNV 360
G + AEE M + NV TY TLI A+ S+ E+A+ + M+ +PN V
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEV 662
Query: 361 V-------------------------------------------------YNSTIHWLFA 371
YNS + L
Sbjct: 663 TFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCV 722
Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL--------------- 416
G V+ A M+ K PD +++ + G C G KQ +
Sbjct: 723 HGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR 782
Query: 417 HNQVLEEHM 425
++QVLE+H+
Sbjct: 783 YSQVLEQHL 791
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/650 (25%), Positives = 306/650 (47%), Gaps = 62/650 (9%)
Query: 54 MAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFD-- 111
M P L V V+ + +K P ALE + + + F H+L + +++ L + +F+
Sbjct: 1 MGPPLLPKHVTAVI-KCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAM 59
Query: 112 DALLL------------------MGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALV 153
+ +L+ M N V + +D Y+ C+ T ++A++
Sbjct: 60 EEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIM 118
Query: 154 RACTQIGATEGAYDVIQKLKVKGHSVSIHAW--------------------NNFLSHLVK 193
G + A+ V +++ +G + ++++ NN S +
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCE 178
Query: 194 LNEI------GRFWK---------LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSL 238
+N + G F++ L+ +M++ G ++TFN ++ LCK+ ++E L
Sbjct: 179 MNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
+++K G+ PN+ +N+ I CQ G+L+ A+ R +G + P+ +T+N +I G
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV---RMVGCLIEQGPKPDVITYNNLIYG 295
Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
CK + + AE M+ G++ + TY TLI GY +GG + A R+ + V G +P+
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 355
Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
Y S I L EG+ AL + ++ + K I P+ Y+ L KGL G + +A +L N
Sbjct: 356 QFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLAN 415
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
++ E+ ++ + ++NIL+N LCK ++ A L+ MI +G PDI T+ LI GY
Sbjct: 416 EMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQL 475
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYN 537
+E A+++ + M P++ YNS++NGLCK + D ++ ++ + T+N
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM-IL 596
L+ K+ EA + EM+N + + V + LI+ CK G A L + M
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 597 HGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
+ + TY ++ F++ + +L +MV + PD TY ++
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 266/516 (51%), Gaps = 17/516 (3%)
Query: 152 LVRACTQIGA-------TEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
+V CT +G EG Y++ K+ G S+ + +N L L K ++ KL
Sbjct: 181 VVAYCTVVGGFYEENFKAEG-YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQV 264
+++ G + N+ T+NL I LC+ +L+ A+ + +++ G P+V+ +N +I C+
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 265 GDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNV 324
+ A +++ +G M + + P+S T+N +I G+CK G V+ AE I + G +
Sbjct: 300 SKFQEA-EVY--LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 325 RTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSD 384
TY +LIDG G + AL L +E + +G+ PN ++YN+ I L +G + A + ++
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 385 MIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
M +K + P+ T++IL GLC+ GCV A L ++ + D +++NILI+
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 445 LAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNS 504
+ A ++L M+ G+ PD+ TY +L++G CK E ++ Y+ M + PNL +N
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 505 IINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNV- 562
++ LC+ LD A LL+ + + DA+T+ TLI+G+ NG + A+ +F +M
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
++ + YNI+I+ + A +L + M+ + PD TY +V F K +
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 623 IELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
+ +M+ +G P T +I+ L ED+V
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCL----CVEDRV 688
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/482 (29%), Positives = 234/482 (48%), Gaps = 12/482 (2%)
Query: 182 HAWNNFLSHLVKLNEIGRFWKL------YKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
H + + S + KL G+F + +E V +E V + Y ++ K++EA
Sbjct: 38 HTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYG--RKGKVQEA 95
Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
++++ RM P V +N I++ G + A K++ +M + P+ +
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM---RDRGITPDVYSFTIR 152
Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
+ FCK R A + M G + NV Y T++ G+ E L +M+ G+
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
+N + L +GDV+ +L +I + + P+ FTY++ +GLC+ G + A +
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
+ ++E+ D +YN LI LCK++ A+ L M+ GL PD TY TLI GYC
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 476 KGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAI 534
KGG ++ A ++ + P+ Y S+I+GLC + + A +L + G+ + I
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
YNTLI G G I EA + +EM G+ +NIL+N LCK GC A L+KVM
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
I G PD T+ L+ +S E +E+ D M+ +GV PD TYN++++ L
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 655 ED 656
ED
Sbjct: 513 ED 514
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 241/519 (46%), Gaps = 49/519 (9%)
Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
+ F+ L+R + G + ++ K+ +G ++ +N F+ L + E+ ++
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
++ G +V T+N +IY LCK K +EA +M+ G+ P+ +N +I C+ G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 267 LEFALKLFRKMGVMSGDSV----LPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
++ A ++ GD+V +P+ T+ +I+G C G A + + GI
Sbjct: 337 VQLAERIV-------GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVV----------------- 361
NV Y TLI G + G EA +L +EM ++GL+P N++
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 362 --------------YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
+N IH + +E AL +L M+D + PD +TY+ L GLC+
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
+ + + ++E+ + +++NIL+ LC+ L A LL M + + PD +T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEK-KPNLVIYNSIINGLCKDASLDAAKSLLQAS- 525
GTLIDG+CK G+++GA ++ M++ K + YN II+ + ++ A+ L Q
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 526 QRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
R D TY +++G+ G + + EM G + +IN LC
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
+A ++ M+ G++P+ V V + + +P+ V+E
Sbjct: 690 EAAGIIHRMVQKGLVPEAVNTICDVDK-KEVAAPKLVLE 727
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 203/434 (46%), Gaps = 23/434 (5%)
Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGL-LDSYEICKATPAVFDALVRACTQ 158
+++ L +F +A + +G +++ EGL DSY ++ L+ +
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVN----------EGLEPDSY--------TYNTLIAGYCK 333
Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
G + A ++ G + + + L E R L+ E + G NV
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 219 FNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMG 278
+N +I L + + EA L M + G+ P V FN+++N C++G + A L +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK--- 450
Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
VM P+ T N +I+G+ ++E A EI M+ G+D +V TY +L++G +
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
E+ + MV++G PN +N + L ++ AL +L +M +K + PD T+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAY-SYNILINYLCKSNNLAAAKQLLSSMIV 457
L G C+NG + A+ L ++ E + V + +YNI+I+ + N+ A++L M+
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 458 RGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDA 517
R L PD TY ++DG+CK GN+ + M + P+L +IN LC + +
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690
Query: 518 AKSLLQASQRIGLL 531
A ++ + GL+
Sbjct: 691 AAGIIHRMVQKGLV 704
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
K +++ L++ + G A + ++ KG + +N ++ L K+ +
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L K M+S GY ++ TFN++I+ + K+E AL + ML +G+ P+V +N ++N C
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ E ++ ++ M V G + PN T N ++ C+ +++ A + M ++
Sbjct: 508 KTSKFEDVMETYKTM-VEKGCA--PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNSTIHWLFAEGDVEGALFV 381
+ T+ TLIDG+ + G + A L +M + + + YN IH + +V A +
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL 624
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
+M+D+ + PD +TY ++ G C+ G V +K +++E + + +IN LC
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684
Query: 442 SNNLAAAKQLLSSMIVRGLIPDII 465
+ + A ++ M+ +GL+P+ +
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVPEAV 708
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 231/449 (51%), Gaps = 4/449 (0%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI + L+ + K+N+ LY +M + G ++ +F ++I+ C+ +L AL+L
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
+M+K G P++V ++N CQ + A+ L + M G +PN V +N +ING
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSL---VDSMDGFGFVPNVVIYNTVINGL 194
Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
CK + A E+ Y M K GI + TY TLI G + G +A RL +MVKR + PN
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
+ + + I EG++ A + +MI + + P+ FTY+ L G C +GC+ A + +
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
++ + D +YN LI CKS + +L M +GL+ D TY TLI GYC+ G
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
+ A +V+ M P++V YN +++ LC + ++ A +++ Q+ + +D ITYN
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
+I G K+ EA+ +F + G+ + + Y +I+ LC+ G ++A +L + M G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHD 627
+P Y + + S E + H+
Sbjct: 495 FMPSERIYDETLRDHYTSLSAELIKAAHE 523
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 225/435 (51%), Gaps = 10/435 (2%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
+ P++ D R T I A +D++ K++ G S ++++ + + + +
Sbjct: 74 RPIPSIVD-FTRVLTVI-AKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLS 131
Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
L +M+ G+ ++ T ++ C+ + +EA+SL M G PNVV +N +I
Sbjct: 132 LALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVI 191
Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
N C+ DL AL++F M + ++VT+N +I+G GR A + M+K
Sbjct: 192 NGLCKNRDLNNALEVFY---CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248
Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
ID NV + LID + + G+ EA L EM++R ++PN YNS I+ G + A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
++ M+ K PD TY+ L G C++ V+ KL ++ + +VGDA++YN LI+
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
C++ L A+++ + M+ G+ PDI+TY L+D C G IE A+ + E+++K E +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFS 557
++ YN II GLC+ L A L ++ R G+ DAI Y T+I+G G EA +
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Query: 558 EMRNVGIAVNKVGYN 572
M+ G ++ Y+
Sbjct: 489 RMKEDGFMPSERIYD 503
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 227/467 (48%), Gaps = 7/467 (1%)
Query: 190 HLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWP 249
H +K ++ + L+ EM+ + ++ F V+ + K K + + LY++M GI
Sbjct: 56 HCIKFDDA---FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISH 112
Query: 250 NVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAE 309
++ F ++I+ C+ L AL L KM + P+ VT ++NGFC+ R + A
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLG---FRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 310 EIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWL 369
+ +M G NV Y T+I+G + AL + M K+G+ + V YN+ I L
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 370 FAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
G A +L DM+ + I P+ ++ L + G + +A L+ +++ +V +
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
++YN LIN C L AK + M+ +G PD++TY TLI G+CK +E ++++
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGK 548
M + YN++I+G C+ L+ A+ + G+ D +TYN L++ NGK
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGK 409
Query: 549 IAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTT 608
I +A M +++ + V+ + YNI+I LC+ ++A L + + G+ PD + Y T
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 609 LVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
+++ + E +L M G P + Y+ + SAE
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAE 516
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 237/524 (45%), Gaps = 31/524 (5%)
Query: 9 LYKSNSP---LSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN- 64
L + N+P LSR+F G + E + C+ E + S+V+
Sbjct: 24 LERGNNPETSLSRSFS-GASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDF 82
Query: 65 -RVVSEFRKSPKLALEFYTWVG-ENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMS 122
RV++ K K + Y + EN SH L S ++H R AL L+G +M
Sbjct: 83 TRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMK 142
Query: 123 ANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
+ L LL+ + Q + A ++ + G ++
Sbjct: 143 LGFRPSIVTLGSLLNGF-----------------CQGNRFQEAVSLVDSMDGFGFVPNVV 185
Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
+N ++ L K ++ +++ M G + T+N +I L + +A L M
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
+K I PNV+ F +I+ + G+L A L+++ M SV+PN T+N +INGFC
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKE---MIRRSVVPNVFTYNSLINGFCIH 302
Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
G + A+ + M+ G +V TY TLI G+ + E+ ++L EM +GL+ + Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
N+ IH G + A V + M+D + PD TY+IL LC NG +++A + + +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
M D +YNI+I LC+++ L A L S+ +G+ PD I Y T+I G C+ G
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
A ++ MK+ P+ IY+ + +D + L++A+
Sbjct: 483 ADKLCRRMKEDGFMPSERIYDETL----RDHYTSLSAELIKAAH 522
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 127/230 (55%), Gaps = 1/230 (0%)
Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
D YS+ ILI+ C+ + L+ A LL M+ G P I+T G+L++G+C+G + AV +
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 488 ENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFIN 546
++M PN+VIYN++INGLCK+ L+ A + ++ G+ DA+TYNTLI+G +
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
G+ +A + +M I N + + LI+ K G +AR L K MI ++P+ TY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+L+ F + + + D MV G PD TYN +I+ K ED
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 240/485 (49%), Gaps = 7/485 (1%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A V+ K+ G+ I ++ L+ I L +MV GY + TF +I+
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDS 284
L K EA++L +M++ G P++V + ++N C+ GD++ AL L KM
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM---EAAR 253
Query: 285 VLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEAL 344
+ N V N II+ CK VE A ++ M GI NV TY +LI+ G +A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 345 RLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGL 404
RL M+++ + PN V +N+ I F EG + A + +MI + I PD TY++L G
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 405 CRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDI 464
C + + +A ++ ++ + + + +YN LIN CK + +L M RGL+ +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 465 ITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA 524
+TY T+I G+ + G+ + A V++ M +++ Y+ +++GLC LD A + +
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493
Query: 525 SQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGC 583
Q+ + L+ YNT+I G GK+ EA+ +F + I + V YN +I+ LC
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL 550
Query: 584 YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNA 643
Q+A +L + M G +P+ TY TL+ ++C EL +M SG D T +
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISL 610
Query: 644 IISPL 648
+ + L
Sbjct: 611 VTNML 615
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 246/500 (49%), Gaps = 38/500 (7%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI +N LS + K+N+ L ++M + G ++ T+++ I C+ +L AL++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM------------------- 280
+M+K G P++V + ++N C + A+ L +M M
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 281 --SGDSVL-----------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
+ ++V P+ VT+ ++NG CK G ++ A + M A I NV +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
T+ID + E A+ L EM +G+ PN V YNS I+ L G A +LS+M++
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
K I P+ T++ L + G + +A KLH ++++ + D +YN+LIN C N L
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AKQ+ M+ + +P+I TY TLI+G+CK +E V+++ M + N V Y +II
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 508 GLCKDASLDAAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
G + D+A+ + + S R+ D +TY+ L++G GK+ A +F ++ +
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVP-TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
+N YN +I +CK G +A +L + I PD VTY T+++ +E +L
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 626 HDDMVLSGVSPDNQTYNAII 645
M G P++ TYN +I
Sbjct: 558 FRKMKEDGTLPNSGTYNTLI 577
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 216/419 (51%), Gaps = 4/419 (0%)
Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
K+++A+ L+ M+KS +P++V FN +++ ++ E + L +M + + +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG---ISHDLY 119
Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
T++ IN FC+ ++ A + M+K G + ++ T ++L++GY +A+ L D+M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
V+ G P+ + + IH LF A+ ++ M+ + PD TY + GLC+ G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
A L N++ + + +N +I+ LCK ++ A L + M +G+ P+++TY +L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIG 529
I+ C G A ++ NM + + PN+V +N++I+ K+ L A+ L + QR
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
D ITYN LING+ ++ ++ EA MF M + N YN LIN CK + E
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
L + M G++ + VTYTT++ F + + + MV + V D TY+ ++ L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 204/412 (49%), Gaps = 6/412 (1%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + +V + G + A +++ K++ ++ +N + L K +
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ EM + G NV T+N +I LC + +A L ML+ I PNVV FN +I+
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L A KL +M S D P+++T+N +INGFC R++ A+++ M+
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSID---PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
N++TY TLI+G+ + E+ + L EM +RGL+ N V Y + I F GD + A V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
M+ + D TYSIL GLC G + A + + + M + + YN +I +CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + A L S+ ++ PD++TY T+I G C ++ A ++ MK+ PN
Sbjct: 516 AGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
YN++I +D A+ L++ + G + + +L+ +G++ ++F
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSF 624
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 237/500 (47%), Gaps = 39/500 (7%)
Query: 186 NFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKS 245
N LS ++K+++ L+ +MV ++ FN ++ A+ K K E +SL +M
Sbjct: 56 NRLSDIIKVDDA---VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
GI ++ +++ IN C+ L AL + KM + + P+ VT + ++NG+C R+
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYE---PDIVTLSSLLNGYCHSKRI 169
Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
A + M++ G + T+ TLI G + EA+ L D+MV+RG P+ V Y +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 366 IHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHM 425
++ L GD++ AL +L+ M I + ++ + LC+ V+ A L ++ + +
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 426 VGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQ 485
+ +YN LIN LC + A +LLS+M+ + + P+++T+ LID + K G + A +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 486 VYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYF 544
++E M + P+ + YN +ING C LD AK + + L I TYNTLING+
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
++ + +F EM G+ N V Y +I + G A+ + K M+ + + D +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 605 TYTTLV--------------------------------TRFSKNCSPEEVIELHDDMVLS 632
TY+ L+ T C +V E D
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 633 GVSPDNQTYNAIISPLLGEK 652
+ PD TYN +IS L ++
Sbjct: 530 SIKPDVVTYNTMISGLCSKR 549
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 1/363 (0%)
Query: 297 NGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLM 356
N + +V+ A ++ M+K+ ++ + L+ A+ E + L ++M G+
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 357 PNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKL 416
+ Y+ I+ + AL VL+ M+ PD T S L G C + + A L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 417 HNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCK 476
+Q++E D +++ LI+ L N + A L+ M+ RG PD++TYGT+++G CK
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 477 GGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAIT 535
G+I+ A+ + M+ K N+VI+N+II+ LCK ++ A L + G+ + +T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 536 YNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMI 595
YN+LIN G+ ++A + S M I N V +N LI+ K G +A +L + MI
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 596 LHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
I PD +TY L+ F + +E ++ MV P+ QTYN +I+ K E
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 656 DQV 658
D V
Sbjct: 416 DGV 418
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 216/405 (53%), Gaps = 5/405 (1%)
Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
GI P+V FN++I C+ L A+ + M ++P+ T ++ G+ + G +
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDM---PSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKR-GLMPNNVVYNS 364
+ A IR M++ G + + ++ G+ + G E+AL EM + G P+ +N+
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
++ L G V+ A+ ++ M+ + PD +TY+ + GLC+ G VK+A ++ +Q++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
+ +YN LI+ LCK N + A +L + +G++PD+ T+ +LI G C N A+
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDA-ITYNTLINGY 543
+++E M+ +P+ YN +I+ LC LD A ++L+ + G + ITYNTLI+G+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
K EA +F EM G++ N V YN LI+ LCK + A +LM MI+ G PD
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
TY +L+T F + ++ ++ M +G PD TY +IS L
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/477 (30%), Positives = 238/477 (49%), Gaps = 5/477 (1%)
Query: 171 KLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKEC 230
K+ V G + +N + L + +++ + ++M S G V + TF V+ +E
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 231 KLEEALSLYYRMLKSGI-WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
L+ AL + +M++ G W NV N+I++ C+ G +E AL ++M + D P+
Sbjct: 239 DLDGALRIREQMVEFGCSWSNV-SVNVIVHGFCKEGRVEDALNFIQEMS--NQDGFFPDQ 295
Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
T N ++NG CK G V+ A EI M++ G D +V TY ++I G + G +EA+ + D+
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
M+ R PN V YN+ I L E VE A + + K I PD T++ L +GLC
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
+ A +L ++ + D ++YN+LI+ LC L A +L M + G +ITY T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRI 528
LIDG+CK A ++++ M+ N V YN++I+GLCK + DAA+ + Q
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 529 GLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
D TYN+L+ + G I +A + M + G + V Y LI+ LCK G + A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+L++ + + GI Y ++ + E I L +M+ +P + I+
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 247/485 (50%), Gaps = 5/485 (1%)
Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
G H +N L+ LV N + + +M G +V+TFN++I ALC+ +L A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
+ + M G+ P+ F ++ + GDL+ AL++ +M V G S ++V+ N I
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM-VEFGCSW--SNVSVNVI 265
Query: 296 INGFCKLGRVEFAEEIRYAMI-KAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRG 354
++GFCK GRVE A M + G + T+ TL++G + G + A+ + D M++ G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 355 LMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAF 414
P+ YNS I L G+V+ A+ VL MI + P+ TY+ L LC+ V++A
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 415 KLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGY 474
+L + + ++ D ++N LI LC + N A +L M +G PD TY LID
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 475 CKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDA 533
C G ++ A+ + + M+ +++ YN++I+G CK A+ + + G+ ++
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 534 ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKV 593
+TYNTLI+G + ++ +A + +M G +K YN L+ C+ G ++A ++++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 594 MILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
M +G PD VTY TL++ K E +L + + G++ YN +I L ++
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625
Query: 654 AEDQV 658
+ +
Sbjct: 626 TTEAI 630
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 195/412 (47%), Gaps = 20/412 (4%)
Query: 100 IVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQI 159
IVH R +DAL + + + + P D Y F+ LV +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFP--------DQY--------TFNTLVNGLCKA 308
Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
G + A +++ + +G+ ++ +N+ +S L KL E+ ++ +M++ N T+
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
N +I LCKE ++EEA L + GI P+V FN +I C + A++LF +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE--- 425
Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
M P+ T+N +I+ C G+++ A + M +G +V TY TLIDG+ +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
+ EA + DEM G+ N+V YN+ I L VE A ++ MI + PD +TY+
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
L CR G +K+A + + D +Y LI+ LCK+ + A +LL S+ ++G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENM-KKVEKKPNLVIYNSIINGLC 510
+ Y +I G + A+ ++ M ++ E P+ V Y + GLC
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 140/290 (48%), Gaps = 5/290 (1%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
F++L++ A ++ ++++ KG +N + L ++ + K+M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
G +V T+N +I CK K EA ++ M G+ N V +N +I+ C+ +
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
E A +L +M +M G P+ T+N ++ FC+ G ++ A +I AM G + ++ TY
Sbjct: 522 EDAAQLMDQM-IMEGQK--PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
TLI G + G E A +L + +G+ YN I LF + A+ + +M++
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 388 KHICP-DHFTYSILTKGLCR-NGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
++ P D +Y I+ +GLC G +++A ++LE+ V + S +L
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 185/657 (28%), Positives = 298/657 (45%), Gaps = 63/657 (9%)
Query: 44 RQRKWKILEQMAPSLTNSLVNRVVSEFRK--SPKLALEFYTWVGENNRFSHSLESSCAIV 101
R ++ +Q+ L+ +R+ EFR +PK AL+F+ ++ FS SL S C ++
Sbjct: 87 RSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLI 146
Query: 102 HLLVNWRRFDDALLLMGNLMSAN-SVSPLEFLEGLLDSYEICKATPAVFDALVRA----- 155
LL++ A +++ L++ N V P + + + + FD +R
Sbjct: 147 GLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDL 206
Query: 156 -----CTQIGATEGAY---DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
CTQ +G Y DV L KG S N L+ LV+ NE + + + ++
Sbjct: 207 LIEVYCTQF-KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DV 264
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN-------- 259
V G +V F I A CK K+EEA+ L+ +M ++G+ PNVV FN +I+
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324
Query: 260 ------------------------------EACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
A ++GD F LK K G PN
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFP------PNV 378
Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
+ +N +I+ F + G + A EI+ M+ G+ TY TLI GY + G ++ A RL E
Sbjct: 379 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKE 438
Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
M+ G N + S I L + + AL + +M+ +++ P + L GLC++G
Sbjct: 439 MLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 498
Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
+A +L Q L + V D + N L++ LC++ L A ++ ++ RG + D ++Y T
Sbjct: 499 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 558
Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
LI G C ++ A + M K KP+ Y+ +I GL ++ A +R G
Sbjct: 559 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 618
Query: 530 LL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
+L D TY+ +I+G + E F EM + + N V YN LI C+ G A
Sbjct: 619 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 678
Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
EL + M GI P+ TYT+L+ S EE L ++M + G+ P+ Y A+I
Sbjct: 679 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 234/504 (46%), Gaps = 14/504 (2%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
+ T + LV+ T+ AY V++++ KG ++ +NN + ++ + + +
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
+ MVS G +T+N +I CK + + A L ML G N F +I C
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ AL+ +G M ++ P +I+G CK G+ A E+ + + G
Sbjct: 460 SHLMFDSALRF---VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 516
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+ RT L+ G G +EA R+ E++ RG + + V YN+ I + ++ A L
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
+M+ + + PD++TYSIL GL V++A + + M+ D Y+Y+++I+ CK+
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
++ M+ + + P+ + Y LI YC+ G + A+++ E+MK PN Y
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
S+I G+ + ++ AK L + + GL + Y LI+GY G++ + + EM +
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 756
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
+ NK+ Y ++I + G +A L+ M GI+PD +TY + + K E
Sbjct: 757 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 816
Query: 622 VIELHDDMVLSGVSPDNQTYNAII 645
+ D + Y AII
Sbjct: 817 AFK----------GSDEENYAAII 830
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 185/386 (47%), Gaps = 12/386 (3%)
Query: 279 VMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGG 338
V++ + P+ T N ++ + + E + ++ G+ +V + T I+ + +GG
Sbjct: 229 VLANKGMFPSKTTCNILLTSLVRANEFQKCCEA-FDVVCKGVSPDVYLFTTAINAFCKGG 287
Query: 339 SSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYS 398
EEA++L +M + G+ PN V +N+ I L G + A M+++ + P TYS
Sbjct: 288 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 347
Query: 399 ILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVR 458
IL KGL R + A+ + ++ ++ + YN LI+ ++ +L A ++ M+ +
Sbjct: 348 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 407
Query: 459 GLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAA 518
GL TY TLI GYCK G + A ++ + M + N + S+I LC D+A
Sbjct: 408 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 467
Query: 519 KS------LLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
L S GLL TLI+G +GK ++A ++ + N G V+ N
Sbjct: 468 LRFVGEMLLRNMSPGGGLL-----TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522
Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
L++ LC+ G +A + K ++ G + D V+Y TL++ +E D+MV
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582
Query: 633 GVSPDNQTYNAIISPLLGEKSAEDQV 658
G+ PDN TY+ +I L E+ +
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAI 608
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 271/553 (49%), Gaps = 12/553 (2%)
Query: 91 SHSLESSCAIVHLLVNWRRFDDALLLMGNLMS--ANSVSPLEFLEGLLDSYEICKA---T 145
S+ L+S A++H+L ++ A L+ +L+ P L ++ E ++ +
Sbjct: 72 SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFS 131
Query: 146 PAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYK 205
VF L+ ++G E A V +++K S A + L+ LV+ W Y+
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWVSREMKCSPDS---KACLSILNGLVRRRRFDSVWVDYQ 188
Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
M+S G V +V+ + ++ K+ + L M GI PNV + + I + C+
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
+E A K+F +M VLPN T++ +I+G+CK G V A + ++ A + NV
Sbjct: 249 KMEEAEKMFE---LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
+ TL+DG+ + A L MVK G+ PN VYN IH G++ A+ +LS+M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
++ PD FTY+IL GLC V +A +L ++ E + + +YN LI+ CK N+
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
A L S M G+ P+IIT+ TLIDGYC +I+ A+ +Y M P++V Y ++
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 506 INGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
I+ K+A++ A L G+ + T+ L++G++ G+++ A + E
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
N VG+ LI LC+ G +A M GI PD +Y +++ + + +
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605
Query: 625 LHDDMVLSGVSPD 637
L DM+ +G+ P+
Sbjct: 606 LQCDMIKTGILPN 618
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 165/308 (53%), Gaps = 1/308 (0%)
Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
M+ RGL+P+ +Y F +G +L +M I P+ + Y+I LCR+
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
+++A K+ + + ++ + Y+Y+ +I+ CK+ N+ A L ++V L+P+++ +GT
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
L+DG+CK + A ++ +M K PNL +YN +I+G CK ++ A LL + +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
L D TY LING I ++AEA +F +M+N I + YN LI+ CK +QA
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
+L M G+ P+ +T++TL+ + + + L+ +M + G+ PD TY A+I
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 649 LGEKSAED 656
E + ++
Sbjct: 490 FKEANMKE 497
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/528 (21%), Positives = 219/528 (41%), Gaps = 88/528 (16%)
Query: 42 NLRQRKWKILEQM-APSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI 100
N+ R + LE + +P + + + ++ EF + E WV + S ++ +I
Sbjct: 113 NMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMG--LFEEALWVSREMKCSPDSKACLSI 170
Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVSPLEFL----------------EGLLDSYEICKA 144
++ LV RRFD + ++S V + E LLD
Sbjct: 171 LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGI 230
Query: 145 TPAVF--DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
P V+ + + E A + + +K G +++ ++ + K + + +
Sbjct: 231 KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYG 290
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
LYKE++ + NV F ++ CK +L A SL+ M+K G+ PN+ +N +I+ C
Sbjct: 291 LYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHC 350
Query: 263 QVGDLEFALKLFRKMGV--------------------------------MSGDSVLPNSV 290
+ G++ A+ L +M M + + P+S
Sbjct: 351 KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA 410
Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
T+N +I+G+CK +E A ++ M +G++ N+ T++TLIDGY + A+ L EM
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD----------------- 393
+G++P+ V Y + I F E +++ AL + SDM++ I P+
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 394 ------------------HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNIL 435
H ++ L +GLC+NG + +A + + + + D SY +
Sbjct: 531 SVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSM 590
Query: 436 INYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
+ + + L MI G++P+++ L Y G ++ A
Sbjct: 591 LKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 11/307 (3%)
Query: 115 LLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRA---CTQIGATEGAYDVIQK 171
L+ G+ S N + + GLL E +P VF + C + E A + QK
Sbjct: 345 LIHGHCKSGNMLEAV----GLLSEMESLNLSPDVFTYTILINGLCIEDQVAE-ANRLFQK 399
Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
+K + S +N+ + K + + L EM + G N+ TF+ +I C
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
++ A+ LY+ M GI P+VV + +I+ + +++ AL+L+ M + +G + PN T
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM-LEAG--IHPNDHT 516
Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
C+++GF K GR+ A + + N + LI+G + G A R +M
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
G+ P+ Y S + E + + + DMI I P+ +L + NG VK
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVK 636
Query: 412 QAFKLHN 418
A L N
Sbjct: 637 SACFLTN 643
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 242/494 (48%), Gaps = 33/494 (6%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI +N LS + K+ + L ++M G N+ T+N++I C+ ++ AL+L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
+M+K G P++V + ++N C + A+ L +M M D++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
PN VT+ ++NG CK G ++ A + M A I+ NV Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
+T+ID + ++AL L EM +G+ PN + Y+S I L A +LSDMI+
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ I P+ T++ L + G + +A KL++++++ + D ++Y+ LIN C + L
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AK + MI + P+++TY TLI+G+CK I+ V+++ M + N V Y ++I+
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 508 GLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
G + D A+ + + G+ I TYNTL++G NGK+ +A +F ++ +
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
YNI+I +CK G + +L + L G+ PD + Y T+++ F + EE L
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 627 DDMVLSGVSPDNQT 640
M G PD+ T
Sbjct: 564 RKMREDGPLPDSGT 577
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 236/469 (50%), Gaps = 9/469 (1%)
Query: 190 HLVKLNE-IGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
H +KL++ IG L+ MV + ++ FN ++ A+ K K + +SL +M + GI
Sbjct: 62 HSMKLDDAIG----LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS 117
Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
N+ +N++IN C+ + AL L KM + + P+ VT + ++NG+C R+ A
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYE---PSIVTLSSLLNGYCHGKRISDA 174
Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
+ M++ G + T+ TLI G + EA+ L D MV+RG PN V Y ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
L GD++ A +L+ M I + YS + LC+ A L ++ + + +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
+Y+ LI+ LC + A +LLS MI R + P+++T+ LID + K G + A ++Y+
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQAS-QRIGLLDAITYNTLINGYFING 547
M K P++ Y+S+ING C LD AK + + + + +TYNTLING+
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYT 607
+I E +F EM G+ N V Y LI+ + A+ + K M+ G+ P+ +TY
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 608 TLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
TL+ KN E+ + + + + S + P TYN +I + ED
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 241/504 (47%), Gaps = 26/504 (5%)
Query: 64 NRVVSEFRKSPKLALEFYTWVGENNR---FSHSLESSCAIVHLLVNWRRFDDALLLMGNL 120
N+++S K K L +GE + SH+L + +++ + AL L+G +
Sbjct: 89 NKLLSAIAKMKKFDL--VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 121 MSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVS 180
M + L LL+ Y C + DA+ ++ ++ G+
Sbjct: 147 MKLGYEPSIVTLSSLLNGY--CHGK-RISDAVA--------------LVDQMVEMGYRPD 189
Query: 181 IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYY 240
+ + L N+ L MV G N+ T+ +V+ LCK ++ A +L
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 241 RMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFC 300
+M + I NVV ++ +I+ C+ + AL LF + M V PN +T++ +I+ C
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE---MENKGVRPNVITYSSLISCLC 306
Query: 301 KLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNV 360
R A + MI+ I+ NV T+ LID + + G EA +L DEM+KR + P+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 361 VYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQV 420
Y+S I+ ++ A + MI K P+ TY+ L G C+ + + +L ++
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 421 LEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNI 480
+ +VG+ +Y LI+ ++ + A+ + M+ G+ P+I+TY TL+DG CK G +
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 481 EGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTL 539
E A+ V+E +++ + +P + YN +I G+CK ++ L + G+ D I YNT+
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 540 INGYFINGKIAEAFAMFSEMRNVG 563
I+G+ G EA A+F +MR G
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDG 570
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 178/393 (45%), Gaps = 39/393 (9%)
Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
L+ A+ LF G M LP+ N +++ K+ + + + M + GI N+ T
Sbjct: 66 LDDAIGLF---GGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYT 122
Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
Y LI+ + R AL L +M+K G P+ V
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIV-------------------------- 156
Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
T S L G C + A L +Q++E D ++ LI+ L N +
Sbjct: 157 ---------TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
A L+ M+ RG P+++TYG +++G CK G+I+ A + M+ + + N+VIY+++I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 507 NGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
+ LCK D A +L + G+ + ITY++LI+ + ++A + S+M I
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 566 VNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIEL 625
N V +N LI+ K G +A +L MI I PD TY++L+ F + +E +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
+ M+ P+ TYN +I+ K ++ V
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 247/514 (48%), Gaps = 35/514 (6%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI +N LS + K+ + L ++M V + T+N++I C+ ++ AL+L
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMS--GDSVL----------- 286
+M+K G P++V + ++N C + A+ L +M M D++
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 287 -------------------PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
PN VT+ ++NG CK G + A + M A I+ +V +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
T+ID + ++AL L EM +G+ PN V Y+S I L + G A +LSDMI+
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
K I P+ T++ L + G +A KL++ +++ + D ++YN L+N C + L
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
AKQ+ M+ + PD++TY TLI G+CK +E +++ M + V Y ++I
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 508 GLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAV 566
GL D D A+ + + G+ D +TY+ L++G NGK+ +A +F M+ I +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 567 NKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELH 626
+ Y +I +CK G +L + L G+ P+ VTY T+++ +E L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 627 DDMVLSGVSPDNQTYNAIISPLL--GEKSAEDQV 658
M G P++ TYN +I L G+K+A ++
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 224/463 (48%), Gaps = 33/463 (7%)
Query: 165 AYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIY 224
A ++ K+ G+ SI ++ L+ I L +MV GY + TF +I+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 225 ALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV----- 279
L K EA++L RM++ G PN+V + +++N C+ GD + AL L KM
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 280 ---------------------------MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIR 312
M + PN VT++ +I+ C GR A ++
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 313 YAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAE 372
MI+ I+ N+ T+ LID + + G EA +L D+M+KR + P+ YNS ++
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 373 GDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSY 432
++ A + M+ K PD TY+ L KG C++ V+ +L ++ +VGD +Y
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
LI L + A+++ M+ G+ PDI+TY L+DG C G +E A++V++ M+K
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAE 551
E K ++ IY ++I G+CK +D L + G+ + +TYNT+I+G + E
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
A+A+ +M+ G N YN LI + G + EL++ M
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 216/421 (51%), Gaps = 4/421 (0%)
Query: 229 ECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPN 288
+ KL++A+ L+ M+KS P++V FN +++ ++ + + L KM + ++
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE---IVHG 119
Query: 289 SVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCD 348
T+N +IN FC+ ++ A + M+K G + ++ T ++L++GY G +A+ L D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
+MV+ G P+ + + + IH LF A+ ++ M+ + P+ TY ++ GLC+ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 409 CVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYG 468
A L N++ + D +N +I+ LCK ++ A L M +G+ P+++TY
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 469 TLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRI 528
+LI C G A Q+ +M + + PNLV +N++I+ K+ A+ L +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 529 GL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQA 587
+ D TYN+L+NG+ ++ ++ +A MF M + + V YN LI CK +
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 588 RELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISP 647
EL + M G++ D VTYTTL+ + + ++ MV GV PD TY+ ++
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 648 L 648
L
Sbjct: 480 L 480
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 204/412 (49%), Gaps = 3/412 (0%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ + +V + G T+ A +++ K++ + +N + L K +
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+KEM + G NV T++ +I LC + +A L M++ I PN+V FN +I+
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G A KL+ M S D P+ T+N ++NGFC R++ A+++ M+
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSID---PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
+V TY TLI G+ + E+ L EM RGL+ + V Y + I LF +GD + A V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
M+ + PD TYSIL GLC NG +++A ++ + + + + D Y Y +I +CK
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ + L S+ ++G+ P+++TY T+I G C ++ A + + MK+ PN
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAF 553
YN++I +D A+ L++ + + + L+ +G++ ++F
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 629
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 161/626 (25%), Positives = 301/626 (48%), Gaps = 63/626 (10%)
Query: 72 KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEF 131
+S L++ F+ + + F HS S+ + H+L RRF + +++ L+
Sbjct: 96 ESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGT----L 151
Query: 132 LEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHL 191
E L +S+ ++T V+D L+ +++ + + +++K+K + +VS ++N+ L H
Sbjct: 152 CELLSNSFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYH- 210
Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEAL--------------- 236
E + W +YKE+ +N +T++ V+ LC++ KLE+A+
Sbjct: 211 --FRETDKMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 264
Query: 237 --------------------SLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
S + +LK G+ P+V N++IN C VG + AL+L
Sbjct: 265 VSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASD 324
Query: 277 MGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYAR 336
M+ V P+SVT+N + GF LG + A E+ M+ G+ +V TY L+ G +
Sbjct: 325 ---MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 381
Query: 337 GGSSEEALRLCDEMVKRGLMPNNVVYNST-IHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
G+ + L L +M+ RG N+++ S + L G ++ AL + + M + PD
Sbjct: 382 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 441
Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
YSI+ GLC+ G A L++++ ++ ++ ++ ++ L+ LC+ L A+ LL S+
Sbjct: 442 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 501
Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
I G DI+ Y +IDGY K G IE A+++++ + + P++ +NS+I G CK ++
Sbjct: 502 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 561
Query: 516 DAAKSLLQASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
A+ +L + GL + ++Y TL++ Y G + EM+ GI V Y+++
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621
Query: 575 INFLCKF----GC--------YQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
LC+ C +++ ++ ++ M GI PD +TY T++ +
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681
Query: 623 IELHDDMVLSGVSPDNQTYNAIISPL 648
+ M + + TYN +I L
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSL 707
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 225/470 (47%), Gaps = 17/470 (3%)
Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
++ L + +G GA++VI+ + KG S + + L +L I L K+
Sbjct: 335 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 394
Query: 207 MVSCGY-VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
M+S G+ + ++ ++++ LCK +++EALSL+ +M G+ P++V ++++I+ C++G
Sbjct: 395 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 454
Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
+ AL L+ +M +LPNS TH ++ G C+ G + A + ++I +G ++
Sbjct: 455 KFDMALWLYDEM---CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 511
Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
Y +IDGYA+ G EEAL L +++ G+ P+ +NS I+ ++ A +L +
Sbjct: 512 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 571
Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK---- 441
+ P +Y+ L G K +L ++ E + +Y+++ LC+
Sbjct: 572 KLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKH 631
Query: 442 --------SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKV 493
KQ L M G+ PD ITY T+I C+ ++ GA E MK
Sbjct: 632 ENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSR 691
Query: 494 EKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEA 552
+ YN +I+ LC + A S + + Q + L Y TLI + + G A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751
Query: 553 FAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
+F ++ + G V+ Y+ +IN LC+ +++ +M+ GI PD
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 144/603 (23%), Positives = 279/603 (46%), Gaps = 48/603 (7%)
Query: 64 NRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSA 123
N V+ FR++ K+ + Y + + N ++S +V L ++ +DA+L
Sbjct: 205 NSVLYHFRETDKM-WDVYKEIKDKNEHTYS-----TVVDGLCRQQKLEDAVLF------- 251
Query: 124 NSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSI 181
L + E P+V F++++ ++G + A + G S+
Sbjct: 252 ------------LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 299
Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
++ N ++ L + I +L +M G + T+N++ + A +
Sbjct: 300 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 359
Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSG---DSVLPNSVTHNCIING 298
ML G+ P+V+ + +++ CQ+G+++ L L + M + G +S++P SV +++G
Sbjct: 360 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSG 414
Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
CK GR++ A + M G+ ++ Y+ +I G + G + AL L DEM + ++PN
Sbjct: 415 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 474
Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
+ + + + L +G + A +L +I D Y+I+ G ++GC+++A +L
Sbjct: 475 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 534
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
V+E + ++N LI CK+ N+A A+++L + + GL P +++Y TL+D Y G
Sbjct: 535 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 594
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLC------------KDASLDAAKSLLQASQ 526
N + ++ MK P V Y+ I GLC ++ + K L+ +
Sbjct: 595 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 654
Query: 527 RIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
G+ D ITYNT+I ++ AF M++ + + YNILI+ LC +G +
Sbjct: 655 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 714
Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+A + + + YTTL+ PE ++L ++ G + + Y+A+I
Sbjct: 715 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 774
Query: 646 SPL 648
+ L
Sbjct: 775 NRL 777
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 174/435 (40%), Gaps = 88/435 (20%)
Query: 113 ALLLMGNLMSANSVSPLEFLEGLLD-SYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
+LL G N L L+ +L +E+ P ++ + G + A + +
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC--SVMLSGLCKTGRIDEALSLFNQ 430
Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
+K G S + A++ + L KL + LY EM + N T ++ LC++
Sbjct: 431 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 490
Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
L EA SL ++ SG ++V +N++I+ + G +E AL+LF+ V+ + P+ T
Sbjct: 491 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK---VVIETGITPSVAT 547
Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSE--EALR---- 345
N +I G+CK + A +I + G+ +V +Y TL+D YA G+++ + LR
Sbjct: 548 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 607
Query: 346 -----------------LCD------------------------EMVKRGLMPNNVVYNS 364
LC +M G+ P+ + YN+
Sbjct: 608 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 667
Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG---------------- 408
I +L + GA L M +++ TY+IL LC G
Sbjct: 668 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 727
Query: 409 ---------------CVK----QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
CVK A KL +Q+L Y+ +IN LC+ + + +K
Sbjct: 728 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESK 787
Query: 450 QLLSSMIVRGLIPDI 464
M+ +G+ PD+
Sbjct: 788 FFFCLMLSQGISPDL 802
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 235/467 (50%), Gaps = 4/467 (0%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
S+ ++ F S + + + K++ G N+ T N++I C+ CK A S+
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
+++K G P+ FN +I G + A+ L +M V +G P+ VT+N I+NG
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VENG--CQPDVVTYNSIVNGI 203
Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
C+ G A ++ M + + +V TY+T+ID R G + A+ L EM +G+ +
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
V YNS + L G +L DM+ + I P+ T+++L + G +++A +L+ +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
++ + + +YN L++ C N L+ A +L M+ PDI+T+ +LI GYC
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNT 538
++ ++V+ N+ K N V Y+ ++ G C+ + A+ L Q G+L D +TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
L++G NGK+ +A +F +++ + + V Y +I +CK G + A L + G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 599 IIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+ P+ +TYT +++ K S E L M G +P++ TYN +I
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 218/427 (51%), Gaps = 4/427 (0%)
Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
K ++A++L+ M++S P++V F+ + + L +++ + + + N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL---NGIAHNIY 124
Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
T N +IN FC+ + FA + ++K G + + T+ TLI G G EA+ L D M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
V+ G P+ V YNS ++ + GD AL +L M ++++ D FTYS + LCR+GC+
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
A L ++ + + +YN L+ LCK+ LL M+ R ++P++IT+ L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL 530
+D + K G ++ A ++Y+ M PN++ YN++++G C L A ++L R
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 531 L-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
D +T+ +LI GY + ++ + +F + G+ N V Y+IL+ C+ G + A E
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
L + M+ HG++PD +TY L+ N E+ +E+ +D+ S + Y II +
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 650 GEKSAED 656
ED
Sbjct: 485 KGGKVED 491
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 239/515 (46%), Gaps = 66/515 (12%)
Query: 167 DVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
D ++L++ G + +I+ N ++ + + + + +++ GY + TFN +I L
Sbjct: 109 DFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL 168
Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM--------- 277
E K+ EA+ L RM+++G P+VV +N I+N C+ GD AL L RKM
Sbjct: 169 FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADV 228
Query: 278 -----------------------GVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYA 314
M + + VT+N ++ G CK G+ +
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 315 MIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGD 374
M+ I NV T+ L+D + + G +EA L EM+ RG+ PN + YN+ + +
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 375 VEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNI 434
+ A +L M+ PD T++ L KG C V K+ + + +V +A +Y+I
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 435 LINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVE 494
L+ C+S + A++L M+ G++PD++TYG L+DG C G +E A++++E+++K +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 495 KKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFA 554
+V+Y +II G+CK GK+ +A+
Sbjct: 469 MDLGIVMYTTIIEGMCK----------------------------------GGKVEDAWN 494
Query: 555 MFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFS 614
+F + G+ N + Y ++I+ LCK G +A L++ M G P+ TY TL+
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLL 649
++ +L ++M G S D + +I LL
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 217/433 (50%), Gaps = 4/433 (0%)
Query: 147 AVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKE 206
F+ L++ G A ++ ++ G + +N+ ++ + + + L ++
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 207 MVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGD 266
M +V T++ +I +LC++ ++ A+SL+ M GI +VV +N ++ C+ G
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 267 LEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRT 326
L + M ++PN +T N +++ F K G+++ A E+ MI GI N+ T
Sbjct: 279 WNDGALLLKD---MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMI 386
Y TL+DGY EA + D MV+ P+ V + S I V+ + V ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 387 DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLA 446
+ + + TYSIL +G C++G +K A +L +++ ++ D +Y IL++ LC + L
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 447 AAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSII 506
A ++ + + I+ Y T+I+G CKGG +E A ++ ++ KPN++ Y +I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 507 NGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIA 565
+GLCK SL A LL+ + G + TYNTLI + +G + + + EM++ G +
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 566 VNKVGYNILINFL 578
+ ++I+ L
Sbjct: 576 ADASSIKMVIDML 588
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 210/413 (50%), Gaps = 5/413 (1%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C+ ++++V + G T A D+++K++ + + ++ + L + I
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+KEM + G +V T+N ++ LCK K + L M+ I PNV+ FN++++
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ G L+ A +L+++M + G S PN +T+N +++G+C R+ A + M++
Sbjct: 309 VKEGKLQEANELYKEM-ITRGIS--PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
++ T+ +LI GY ++ +++ + KRGL+ N V Y+ + G ++ A +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
+M+ + PD TY IL GLC NG +++A ++ + + M Y +I +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ A L S+ +G+ P+++TY +I G CK G++ A + M++ PN
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAF 553
YN++I +D L A+ L++ + G DA + +I+ ++G++ ++F
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID-MLLSGELDKSF 597
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 1/288 (0%)
Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
NV + + + + A+ + +MI P +S + R
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
Q+ + + Y+ NI+IN C+ A +L ++ G PD T+ TLI G G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQA-SQRIGLLDAITYN 537
+ AV + + M + +P++V YNSI+NG+C+ A LL+ +R D TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
T+I+ +G I A ++F EM GI + V YN L+ LCK G + L+K M+
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
I+P+ +T+ L+ F K +E EL+ +M+ G+SP+ TYN ++
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 236/473 (49%), Gaps = 7/473 (1%)
Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
NN L +V+ E+ +K + MV G V ++ +I C+ K +A + +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
SG P+V+ +N++I+ C+ G++ AL + +M SV P+ VT+N I+ C G+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM------SVSPDVVTYNTILRSLCDSGK 219
Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
++ A E+ M++ +V TY LI+ R A++L DEM RG P+ V YN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
++ + EG ++ A+ L+DM P+ T++I+ + +C G A KL +L +
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
++NILIN+LC+ L A +L M G P+ ++Y L+ G+CK ++ A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQRIGLLDAITYNTLINGY 543
+ E M P++V YN+++ LCKD + DA + L Q S + ITYNT+I+G
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
GK +A + EMR + + + Y+ L+ L + G +A + GI P+
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
VT+ +++ K+ + I+ M+ G P+ +Y +I L E A++
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 237/483 (49%), Gaps = 7/483 (1%)
Query: 153 VRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY 212
+R + G E + ++ + G+ I + +L + + K+ + + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 213 VENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALK 272
V +V T+N++I CK ++ ALS+ RM + P+VV +N I+ C G L+ A++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 273 LFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLID 332
+ +M + D P+ +T+ +I C+ V A ++ M G +V TY L++
Sbjct: 226 VLDRM--LQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 333 GYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICP 392
G + G +EA++ ++M G PN + +N + + + G A +L+DM+ K P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 393 DHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLL 452
T++IL LCR G + +A + ++ + ++ SYN L++ CK + A + L
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 453 SSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKD 512
M+ RG PDI+TY T++ CK G +E AV++ + P L+ YN++I+GL K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 513 ASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
A LL + L D ITY++L+ G GK+ EA F E +GI N V +
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
N ++ LCK +A + + MI G P+ +YT L+ + +E +EL +++
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 632 SGV 634
G+
Sbjct: 583 KGL 585
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 227/443 (51%), Gaps = 8/443 (1%)
Query: 204 YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQ 263
Y + S +E+V + N + + + +LEE M+ G P+++ +I C+
Sbjct: 91 YSSVNSSFALEDVESNNH-LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 264 VGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCN 323
+G A K+ ++ G +P+ +T+N +I+G+CK G + A + + + + +
Sbjct: 150 LGKTRKAAKILE---ILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPD 203
Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
V TY T++ G ++A+ + D M++R P+ + Y I + V A+ +L
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 384 DMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSN 443
+M D+ PD TY++L G+C+ G + +A K N + + ++NI++ +C +
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 444 NLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYN 503
A++LL+ M+ +G P ++T+ LI+ C+ G + A+ + E M + +PN + YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 504 SIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
+++G CK+ +D A L+ G D +TYNT++ +GK+ +A + +++ +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
G + + YN +I+ L K G +A +L+ M + PD +TY++LV S+ +E
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 623 IELHDDMVLSGVSPDNQTYNAII 645
I+ + G+ P+ T+N+I+
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIM 526
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 235/473 (49%), Gaps = 9/473 (1%)
Query: 129 LEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFL 188
+FLE ++ + P L+R ++G T A +++ L+ G + +N +
Sbjct: 122 FKFLENMVYHGNVPDIIPCT--TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 189 SHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIW 248
S K EI + M +V T+N ++ +LC KL++A+ + RML+ +
Sbjct: 180 SGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 249 PNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFA 308
P+V+ + ++I C+ + A+KL +M P+ VT+N ++NG CK GR++ A
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEM---RDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 309 EEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHW 368
+ M +G NV T+ ++ G +A +L +M+++G P+ V +N I++
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 369 LFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGD 428
L +G + A+ +L M P+ +Y+ L G C+ + +A + +++ D
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 429 AYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYE 488
+YN ++ LCK + A ++L+ + +G P +ITY T+IDG K G A+++ +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 489 NMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFING 547
M+ + KP+ + Y+S++ GL ++ +D A +R+G+ +A+T+N+++ G +
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSR 533
Query: 548 KIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGII 600
+ A M N G N+ Y ILI L G ++A EL+ + G++
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 207/421 (49%), Gaps = 7/421 (1%)
Query: 239 YYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIING 298
+Y + S V N + + + G+LE K M V G+ +P+ + +I G
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENM-VYHGN--VPDIIPCTTLIRG 146
Query: 299 FCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPN 358
FC+LG+ A +I + +G +V TY +I GY + G AL + D M + P+
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPD 203
Query: 359 NVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHN 418
V YN+ + L G ++ A+ VL M+ + PD TY+IL + CR+ V A KL +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 419 QVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGG 478
++ + D +YN+L+N +CK L A + L+ M G P++IT+ ++ C G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 479 NIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYN 537
A ++ +M + P++V +N +IN LC+ L A +L+ + G ++++YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 538 TLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILH 597
L++G+ K+ A M + G + V YN ++ LCK G + A E++ +
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 598 GIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
G P +TY T++ +K + I+L D+M + PD TY++++ L E ++
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 658 V 658
+
Sbjct: 504 I 504
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/620 (26%), Positives = 288/620 (46%), Gaps = 22/620 (3%)
Query: 45 QRKWKIL---EQMAPSLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIV 101
+R W+I E ++ L V ++ PKL L F+ ++G + F HS S C ++
Sbjct: 52 KRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILI 111
Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICK-ATPAVFDALVRACTQIG 160
H LV F A L+ + ++ P + L YE CK ++ + FD L++ +
Sbjct: 112 HALVKANLFWPASSLL-QTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVR-- 168
Query: 161 ATEGAYDVIQKLKVKGHSVS----IHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENV 216
+ D + K+ VS + + L LVK G +L+ +MVS G +V
Sbjct: 169 -SRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV 227
Query: 217 NTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRK 276
+ VI +LC+ L A + M +G N+V +N++I+ C+ K++
Sbjct: 228 YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK------KQKVWEA 281
Query: 277 MGV---MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDG 333
+G+ ++G + P+ VT+ ++ G CK+ E E+ M+ + ++L++G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 334 YARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPD 393
+ G EEAL L +V G+ PN VYN+ I L A + M + P+
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 394 HFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLS 453
TYSIL CR G + A ++++ + Y YN LIN CK +++AA+ ++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 454 SMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDA 513
MI + L P ++TY +L+ GYC G I A+++Y M P++ + ++++GL +
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 514 SL-DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYN 572
+ DA K + ++ + +TYN +I GY G +++AF EM GI + Y
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 573 ILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
LI+ LC G +A+ + + + + YT L+ F + EE + + +MV
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 633 GVSPDNQTYNAIISPLLGEK 652
GV D Y +I L K
Sbjct: 642 GVDLDLVCYGVLIDGSLKHK 661
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/586 (25%), Positives = 270/586 (46%), Gaps = 56/586 (9%)
Query: 99 AIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQ 158
A++H LV +R F A+ L +++S + P D Y ++ ++R+ +
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVG-IRP--------DVY--------IYTGVIRSLCE 239
Query: 159 IGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNT 218
+ A ++I ++ G V+I +N + L K ++ + K++ +V T
Sbjct: 240 LKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVT 299
Query: 219 FNLVIYALCK-----------------------------------ECKLEEALSLYYRML 243
+ ++Y LCK K+EEAL+L R++
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
G+ PN+ +N +I+ C+ A LF +MG + + PN VT++ +I+ FC+ G
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG---LRPNDVTYSILIDMFCRRG 416
Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
+++ A M+ G+ +V Y +LI+G+ + G A EM+ + L P V Y
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
S + ++G + AL + +M K I P +T++ L GL R G ++ A KL N++ E
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
++ + +YN++I C+ +++ A + L M +G++PD +Y LI G C G A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLING 542
+ + K + N + Y +++G C++ L+ A S+ Q + G+ LD + Y LI+G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
+ F + EM + G+ + V Y +I+ K G +++A + +MI G +P+
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
VTYT ++ K E L M P+ TY + L
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/587 (26%), Positives = 265/587 (45%), Gaps = 28/587 (4%)
Query: 89 RFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFL-EGLLDSYEICKA--- 144
RFS S + ++V L + ++AL L+ ++ VSP F+ L+DS +CK
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG-VSPNLFVYNALIDS--LCKGRKF 383
Query: 145 -----------------TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNF 187
+ L+ + G + A + ++ G +S++ +N+
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 188 LSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGI 247
++ K +I EM++ V T+ ++ C + K+ +AL LY+ M GI
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 248 WPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEF 307
P++ F +++ + G + A+KLF +M + V PN VT+N +I G+C+ G +
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN---VKPNRVTYNVMIEGYCEEGDMSK 560
Query: 308 AEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIH 367
A E M + GI + +Y LI G G + EA D + K N + Y +H
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 368 WLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVG 427
EG +E AL V +M+ + + D Y +L G ++ K F L ++ + +
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 428 DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVY 487
D Y +I+ K+ + A + MI G +P+ +TY +I+G CK G + A +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 488 ENMKKVEKKPNLVIYNSIINGLCK-DASLDAAKSLLQASQRIGLLDAITYNTLINGYFIN 546
M+ V PN V Y ++ L K + + A L A + L + TYN LI G+
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 547 GKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTY 606
G+I EA + + M G++ + + Y +IN LC+ ++A EL M GI PD V Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 607 TTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKS 653
TL+ + EL ++M+ G+ P+N+T S KS
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 9/340 (2%)
Query: 324 VRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLS 383
VRT + L+ G + A+ L ++MV G+ P+ +Y I L D+ A +++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 384 DM----IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
M D +I P Y++L GLC+ V +A + + + + D +Y L+ L
Sbjct: 252 HMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
CK +++ M+ P +L++G K G IE A+ + + + PNL
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
+YN++I+ LCK A+ L +IGL + +TY+ LI+ + GK+ A + E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
M + G+ ++ YN LIN CKFG A M MI + P VTYT+L+ +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
+ + L+ +M G++P T+ ++S L D V
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 253/500 (50%), Gaps = 8/500 (1%)
Query: 156 CTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVEN 215
C + +G Y+++ ++K + +S + + + + ++ + + KEM++ G N
Sbjct: 393 CREKNVRQG-YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 216 VNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFR 275
V + +I + + +A+ + M + GI P++ C+N +I + ++ A
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 276 KMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYA 335
+M V +G + PN+ T+ I+G+ + A++ M + G+ N LI+ Y
Sbjct: 512 EM-VENG--LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 336 RGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHF 395
+ G EA MV +G++ + Y ++ LF V+ A + +M K I PD F
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 396 TYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSM 455
+Y +L G + G +++A + ++++EE + + YN+L+ C+S + AK+LL M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 456 IVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL 515
V+GL P+ +TY T+IDGYCK G++ A ++++ MK P+ +Y ++++G C+ +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 516 DAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGI----AVNKVGY 571
+ A ++ +++ +N LIN F GK + + + + N V Y
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808
Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
NI+I++LCK G + A+EL M ++P +TYT+L+ + K E+ + D+ +
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 632 SGVSPDNQTYNAIISPLLGE 651
+G+ PD+ Y+ II+ L E
Sbjct: 869 AGIEPDHIMYSVIINAFLKE 888
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 266/549 (48%), Gaps = 53/549 (9%)
Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
+P + +V+ G +GAY++++++ G ++ + + ++ + G ++
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 205 KEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN---EA 261
KEM G ++ +N +I L K +++EA S M+++G+ PN + I+ EA
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
+ + +K R+ G VLPN V +IN +CK G+V A +M+ GI
Sbjct: 536 SEFASADKYVKEMRECG------VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
+ +TY L++G + ++A + EM +G+ P+ Y I+ G+++ A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
+M+++ + P+ Y++L G CR+G +++A +L +++ + + +A +Y +I+ CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK--------- 492
S +LA A +L M ++GL+PD Y TL+DG C+ ++E A+ ++ KK
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769
Query: 493 ------VEK-----------------------KPNLVIYNSIINGLCKDASLDAAKSLLQ 523
V K KPN V YN +I+ LCK+ +L+AAK L
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 524 ASQRIGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFG 582
Q L+ ITY +L+NGY G+ AE F +F E GI + + Y+++IN K G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 583 CYQQARELMKVMILHGIIPD-----YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPD 637
+A L+ M + D T L++ F+K E ++ ++MV PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 638 NQTYNAIIS 646
+ T +I+
Sbjct: 950 SATVIELIN 958
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 172/644 (26%), Positives = 294/644 (45%), Gaps = 31/644 (4%)
Query: 11 KSNSPLSRAFHVG-KQFANPSTEDIVFRAICVNLRQRKWK---ILEQMAPSLTNSLVNRV 66
++N L R+F V ++ ++ S E I L+Q W+ + ++ + +V V
Sbjct: 15 RANFLLFRSFSVNVEKLSDASAE------IAGILKQENWRDTLVSSNLSIEINPEVVLSV 68
Query: 67 VSEFR-KSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANS 125
+ R P L F+ WV L+S + L N+ F+ AL ++ ++ N
Sbjct: 69 LRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW 128
Query: 126 VSPLEFLEGLLDSYE-ICKATPAV-FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHA 183
+ + S E + K+ V F L G E A V +
Sbjct: 129 PVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSR 188
Query: 184 WNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRML 243
L L++ N + FW +YK MV V +V T++++I A C+ ++ + ++
Sbjct: 189 CKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248
Query: 244 KSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
K + +++ ALKL M + G ++P T++ +I+G CK+
Sbjct: 249 KEFRTATL--------------NVDGALKLKESM-ICKG--LVPLKYTYDVLIDGLCKIK 291
Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
R+E A+ + M G+ + TY+ LIDG +G +++ A L EMV G+ +Y+
Sbjct: 292 RLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD 351
Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
I + EG +E A + MI + P Y+ L +G CR V+Q ++L ++ +
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
++V Y+Y ++ +C S +L A ++ MI G P+++ Y TLI + + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLING 542
++V + MK+ P++ YNS+I GL K +D A+S L GL +A TY I+G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
Y + A A EMR G+ NKV LIN CK G +A + M+ GI+ D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
TYT L+ KN ++ E+ +M G++PD +Y +I+
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 161/362 (44%), Gaps = 42/362 (11%)
Query: 327 YATLIDGYARGGSSEEALRLCDEMVKRGLMPN----NVVYNSTIHW----LFAEGDVEGA 378
+ L DGY G EEA+ + + L+P V+ ++ + W LF +
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD------ 207
Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK---------------------QAFKLH 417
V M+++++ D TY +L CR G V+ A KL
Sbjct: 208 --VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 418 NQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKG 477
++ + +V Y+Y++LI+ LCK L AK LL M G+ D TY LIDG KG
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 478 GNIEGAVQVYENM--KKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAI 534
N + A + M + KP + Y+ I + K+ ++ AK+L GL+ A
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 535 TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVM 594
Y +LI GY + + + + EM+ I ++ Y ++ +C G A ++K M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 595 ILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSA 654
I G P+ V YTTL+ F +N + + + +M G++PD YN++I L K
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 655 ED 656
++
Sbjct: 504 DE 505
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 42/342 (12%)
Query: 145 TPAVFD--ALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
P VF L+ +++G + A + ++ +G + ++ +N L + EI + +
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L EM G N T+ +I CK L EA L+ M G+ P+ + +++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 263 QVGDLEFALKLF--RKMGVMSGDSVL---------------------------------P 287
++ D+E A+ +F K G S + P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
N VT+N +I+ CK G +E A+E+ + M A + V TY +L++GY + G E +
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI-----LTK 402
DE + G+ P++++Y+ I+ EG AL ++ M K+ D SI L
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 403 GLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNN 444
G + G ++ A K+ ++ + D+ + LIN C S+N
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 177/688 (25%), Positives = 314/688 (45%), Gaps = 62/688 (9%)
Query: 11 KSNSPLSRAFHVGKQFANPSTED--IVFRAICV-NLRQRKWKILEQMAPSLTNSLVNRVV 67
++N P K+ NPS E +V+ + N K +L ++ V V+
Sbjct: 20 RNNKPFCSQSQFPKESENPSQEQRLLVYGSTSEENPVTSKVSLLSAKPEQKDDASVIDVL 79
Query: 68 SEFRKSPKLALEFYTWVGENNRFSHSLESS---CAIVHLLVN----WRRFDDALLLMGNL 120
R +P+ AL FY W + S E ++H+LV+ + R D L+
Sbjct: 80 LNRRNNPEAALRFYNWA---RPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI---RY 133
Query: 121 MSANSVSPLE--FLEGLLDSYEIC--KATPAVFDALVRACTQIGATEGAYDVIQKLKVKG 176
+S ++ +P+ + L+DS + + F+ L+ A ++ T+ A D++ ++ ++
Sbjct: 134 VSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM-LEL 192
Query: 177 HSVSIHAW-NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
+ + N LS LV+ N + +LY MV+ G + T L++ A +E K EA
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEA 252
Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCI 295
L + R ++ G P+ + +++ + C+ DL A L R+M +P+ T+ +
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK--EKKLCVPSQETYTSV 310
Query: 296 INGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGL 355
I K G ++ A ++ M+ GI NV +LI G+ + AL L D+M K G
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 356 MPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFK 415
PN+V ++ I W G++E AL M + P F + +G + ++A K
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 416 LHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYC 475
L ++ E + + + N ++++LCK A +LLS M RG+ P++++Y ++ G+C
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 476 KGGNIEGAVQVYENMKKVEKKP-----------------------------------NLV 500
+ N++ A V+ N+ + KP N V
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 501 IYNSIINGLCKDASLDAAKSLL--QASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSE 558
+Y +IINGLCK A+ LL ++ + ++YN++I+G+F G++ A A + E
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 559 MRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS 618
M GI+ N + Y L+N LCK QA E+ M G+ D Y L+ F K +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 619 PEEVIELHDDMVLSGVSPDNQTYNAIIS 646
E L +++ G++P YN++IS
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLIS 697
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 248/485 (51%), Gaps = 6/485 (1%)
Query: 168 VIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALC 227
+ K++ +G S + ++ + K E+ + + YK+M G +V + +I
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
K K EEAL L+ ++G+ VC N I++ C+ G + A +L KM + P
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTDEATELLSKM---ESRGIGP 476
Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
N V++N ++ G C+ ++ A + +++ G+ N TY+ LIDG R + AL +
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID-KHICPDHFTYSILTKGLCR 406
+ M + N VVY + I+ L G A +L++MI+ K +C +Y+ + G +
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
G + A + ++ + + +Y L+N LCK+N + A ++ M +G+ DI
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
YG LIDG+CK N+E A ++ + + P+ IYNS+I+G ++ AA L +
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQ 585
+ GL D TY TLI+G +G + A +++EM+ VG+ +++ Y +++N L K G +
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 586 QARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+ ++ + M + + P+ + Y ++ + + +E LHD+M+ G+ PD T++ ++
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 646 SPLLG 650
S +G
Sbjct: 837 SGQVG 841
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 247/510 (48%), Gaps = 28/510 (5%)
Query: 51 LEQMAPSLTNSLVNRVVSEFRKSPKL--ALEFYTWVGENNRFSHSLESSCAIVHLLVNWR 108
+E+ PS + + ++ FRK+ ++ ALEFY + E + S+ I+ + +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGWLKGQ 423
Query: 109 RFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDV 168
+ ++AL L +S+E A V + ++ + G T+ A ++
Sbjct: 424 KHEEALKLFD------------------ESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 169 IQKLKVKGHSVSIHAWNN-FLSHLVKLN-EIGRFWKLYKEMVSCGYVENVNTFNLVIYAL 226
+ K++ +G ++ ++NN L H + N ++ R ++ ++ G N T++++I
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI--VFSNILEKGLKPNNYTYSILIDGC 523
Query: 227 CKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVL 286
+ + AL + M S I N V + IIN C+VG A +L M + +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM--IEEKRLC 581
Query: 287 PNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRL 346
+ +++N II+GF K G ++ A M GI NV TY +L++G + ++AL +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Query: 347 CDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCR 406
DEM +G+ + Y + I ++E A + S+++++ + P Y+ L G
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Query: 407 NGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIIT 466
G + A L+ ++L++ + D +Y LI+ L K NL A +L + M GL+PD I
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 467 YGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQ 526
Y +++G K G V+++E MKK PN++IYN++I G ++ +LD A L
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 527 RIGLL-DAITYNTLINGYFINGKIAEAFAM 555
G+L D T++ L++G N + A ++
Sbjct: 822 DKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 187/404 (46%), Gaps = 4/404 (0%)
Query: 246 GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRV 305
G N FN ++N + + A+ + +M + V+P N ++ + +
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELD---VIPFFPYVNRTLSALVQRNSL 214
Query: 306 EFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNST 365
A+E+ M+ G+D + T L+ R EAL + ++RG P++++Y+
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA 274
Query: 366 IHWLFAEGDVEGALFVLSDMIDKHIC-PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
+ D+ A +L +M +K +C P TY+ + + G + A +L +++L +
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDG 334
Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
+ + + LI CK+N+L +A L M G P+ +T+ LI+ + K G +E A+
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYF 544
+ Y+ M+ + P++ ++II G K + A L S GL + NT+++
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLC 454
Query: 545 INGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYV 604
GK EA + S+M + GI N V YN ++ C+ AR + ++ G+ P+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 605 TYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
TY+ L+ +N + +E+ + M S + + Y II+ L
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGL 558
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 3/262 (1%)
Query: 397 YSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMI 456
++ L ++ A + NQ+LE ++ N ++ L + N+L AK+L S M+
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 457 VRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLD 516
G+ D +T L+ + A++V + +P+ ++Y+ + CK L
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 517 AAKSLLQ--ASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNIL 574
A SLL+ +++ + TY ++I G + +A + EM + GI++N V L
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 575 INFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
I CK A L M G P+ VT++ L+ F KN E+ +E + M + G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 635 SPDNQTYNAIISPLL-GEKSAE 655
+P + II L G+K E
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEE 427
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 560 RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSP 619
++ G VN +N L+N K A +++ M+ +IP + ++ + S
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSL 214
Query: 620 EEVIELHDDMVLSGVSPDNQTYNAII-SPLLGEKSAE 655
E EL+ MV GV DN T ++ + L EK AE
Sbjct: 215 TEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAE 251
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 162/609 (26%), Positives = 291/609 (47%), Gaps = 10/609 (1%)
Query: 5 FCNCLYKSNSPLSRAFHVGKQFANPSTEDIVFRAICVNLRQRKWKILEQMAPSLTNSLVN 64
+ +++ L R G P + V R + + +++ L ++ ++ L+N
Sbjct: 19 YTRSFSEASRTLRRELRGGNGRIRPELLERVSRLLVLG----RYEALHDLSLDFSDELLN 74
Query: 65 RVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSAN 124
++ R +P+ LE + + +F ++ C +VH+L R + + L++ N
Sbjct: 75 SILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALN 134
Query: 125 SVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAW 184
+ + E L+ ++ +P VFD +++ + G + A V + G S+ +
Sbjct: 135 HSGFVVWGE-LVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSC 193
Query: 185 NNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
N+ LS+LV+ E +Y +M+S +V T ++V+ A C+ +++A+
Sbjct: 194 NSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETES 253
Query: 245 S-GIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLG 303
S G+ NVV +N +IN +GD+E ++ R +MS V N VT+ +I G+CK G
Sbjct: 254 SLGLELNVVTYNSLINGYAMIGDVEGMTRVLR---LMSERGVSRNVVTYTSLIKGYCKKG 310
Query: 304 RVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYN 363
+E AE + + + + + Y L+DGY R G +A+R+ D M++ G+ N + N
Sbjct: 311 LMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICN 370
Query: 364 STIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEE 423
S I+ G + A + S M D + PDH TY+ L G CR G V +A KL +Q+ ++
Sbjct: 371 SLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQK 430
Query: 424 HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGA 483
+V +YNIL+ + L M+ RG+ D I+ TL++ K G+ A
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Query: 484 VQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLING 542
++++EN+ + + N +I+GLCK ++ AK +L A+ TY L +G
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG 550
Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
Y+ G + EAFA+ M GI YN LI+ K+ + +L+ + G+ P
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 603 YVTYTTLVT 611
TY L+T
Sbjct: 611 VATYGALIT 619
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 143/574 (24%), Positives = 252/574 (43%), Gaps = 35/574 (6%)
Query: 90 FSHSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVF 149
F+ ESS + +V + + ++G++ V L G+ +
Sbjct: 247 FAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGV-------SRNVVTY 299
Query: 150 DALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVS 209
+L++ + G E A V + LK K H + + + +I +++ M+
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 210 CGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEF 269
G N N +I CK +L EA ++ RM + P+ +N +++ C+ G ++
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 270 ALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYAT 329
ALKL +M V+P +T+N ++ G+ ++G + M+K G++ + + +T
Sbjct: 420 ALKLCDQM---CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476
Query: 330 LIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKH 389
L++ + G EA++L + ++ RGL+ + + N I L V A +L ++
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 390 ICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAK 449
P TY L+ G + G +K+AF + + + + YN LI+ K +L
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596
Query: 450 QLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGL 509
L+ + RGL P + TYG LI G+C G I+ A M + N+ I + I N L
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Query: 510 CKDASLDAAKSLLQASQRIGLLDAITYNTLINGY-----FING---------KIAEAFAM 555
+ +D A LLQ + ++ L+ GY F+ KIAE+
Sbjct: 657 FRLDKIDEACLLLQK--------IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVEN 708
Query: 556 FSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG-IIPDYVTYTTLVTRFS 614
+ + + N + YN+ I LCK G + AR+L ++ IPD TYT L+ +
Sbjct: 709 STPKK--LLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 615 KNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
+ L D+M L G+ P+ TYNA+I L
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 217/468 (46%), Gaps = 28/468 (5%)
Query: 182 HAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYR 241
H +N + + + KL +M V V T+N+++ + + LSL+
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461
Query: 242 MLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCK 301
MLK G+ + + + ++ ++GD A+KL+ + +L +++T N +I+G CK
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV---LARGLLTDTITLNVMISGLCK 518
Query: 302 LGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVV 361
+ +V A+EI + V+TY L GY + G+ +EA + + M ++G+ P +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578
Query: 362 YNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVL 421
YN+ I F + ++ ++ + + P TY L G C G + +A+ +++
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 422 EEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN-I 480
E+ + + + + N L + + + A LL I+ + L+ GY +
Sbjct: 639 EKGITLNVNICSKIANSLFRLDKIDEACLLLQK---------IVDFDLLLPGYQSLKEFL 689
Query: 481 EGAVQVYENMKKVEKK-----------PNLVIYNSIINGLCKDASLDAAKSL---LQASQ 526
E + +K+ + PN ++YN I GLCK L+ A+ L L +S
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749
Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
R + D TY LI+G I G I +AF + EM GI N V YN LI LCK G +
Sbjct: 750 RF-IPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDR 808
Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGV 634
A+ L+ + GI P+ +TY TL+ K+ + E + L + M+ G+
Sbjct: 809 AQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 210/484 (43%), Gaps = 92/484 (19%)
Query: 145 TPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLY 204
T ++ L++ ++IGA + + + +G + + + L L KL + KL+
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 205 KEMVSCGYVENVNTFNLVIYALCK-----------------ECK---------------- 231
+ +++ G + + T N++I LCK CK
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 232 --LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
L+EA ++ M + GI+P + +N +I+ A + L L ++ + P
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL---RARGLTPTV 611
Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
T+ +I G+C +G ++ A + MI+ GI NV + + + R +EA L +
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 671
Query: 350 MV--------------------------------------KRGLMPNNVVYNSTIHWLFA 371
+V K+ L+PNN+VYN I L
Sbjct: 672 IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCK 731
Query: 372 EGDVEGALFVLSDMI--DKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDA 429
G +E A + SD++ D+ I PD +TY+IL G G + +AF L +++ + ++ +
Sbjct: 732 AGKLEDARKLFSDLLSSDRFI-PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790
Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
+YN LI LCK N+ A++LL + +G+ P+ ITY TLIDG K GN+ A+++ E
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850
Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKS-LLQASQRIGLLDAITYNTLINGYFINGK 548
M I ++ G K +D K +L ++G I N+ N + +
Sbjct: 851 M----------IEKGLVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNS--NELYDVRR 898
Query: 549 IAEA 552
++EA
Sbjct: 899 VSEA 902
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 182/692 (26%), Positives = 312/692 (45%), Gaps = 127/692 (18%)
Query: 42 NLRQRKWKILEQMAPSLTN-SLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAI 100
N RKW Q LT+ +L+ RV++ R P++A F+ W+ + S ++ A+
Sbjct: 67 NKPNRKWSS-HQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAM 125
Query: 101 VHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIG 160
+ +L ++ L+ L++ S+ L +EI D L+
Sbjct: 126 LEILA-----ENDLMSEAYLVAERSID--------LGMHEID-------DLLI------- 158
Query: 161 ATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFN 220
+G++D + LK+ + ++ K + +F +++M+ G++ +V N
Sbjct: 159 --DGSFDKLIALKLLDLLLWVY---------TKKSMAEKFLLSFEKMIRKGFLPSVRNCN 207
Query: 221 LVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVM 280
+V+ L + +A ++Y M++ GI P V+ FN +++ + GDLE K++ +M
Sbjct: 208 IVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM--- 264
Query: 281 SGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSS 340
++ + VT+N +INGF K G++E A M ++G ++ LI+GY + G
Sbjct: 265 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 324
Query: 341 EEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSIL 400
++A + DEM+ G+ P YN I L G ++ A +LS M PD +Y+ L
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTL 380
Query: 401 TKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGL 460
G + G +A L + + + +YN LI+ LC+S NL A++L M + +
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN---------------------- 498
PD+ITY TL+ G+ K GN+ A +VY+ M + KP+
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500
Query: 499 --------------LVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGY 543
L IYN I+GLCK +L A + R+GL+ D +TY T+I GY
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 544 FING-----------------------------------KIAEAFAMFSEMRNVGIAVNK 568
NG ++ +AF +EM+ G+ N
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 569 VGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCS---PEEVIEL 625
+ +N L+ +CK G +A + M GI P+ +YT L+ SKNC EEV++L
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI---SKNCDFEKWEEVVKL 677
Query: 626 HDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQ 657
+ +M+ + PD T+ A+ L EK E +
Sbjct: 678 YKEMLDKEIEPDGYTHRALFKHL--EKDHESR 707
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 265/549 (48%), Gaps = 35/549 (6%)
Query: 88 NRFSHS-LESSCAIVHLLVNW----RRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEIC 142
NR H + S I ++L++ +R +DA L +++ + L L+D Y C
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY--C 260
Query: 143 KA------------------TPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIH 182
KA P++ F+ L++ + G E A +V++++K G
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 183 AWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRM 242
++ + +Y+ V G N T ++++ ALCKE K+E+A + R
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 243 LKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKL 302
+ G+ PN V +N +I+ C+ GDL A K+ M + P+ + +NC+I FC+L
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGAR---MKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 303 GRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVY 362
G +E AE+ M G+ +V TY LI GY R ++ + EM G MPN V Y
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 363 NSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLE 422
+ I+ L + A V DM D+ + P Y++L G C G ++ AF+ ++L+
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 423 EHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEG 482
+ + + +YN LI+ L + L+ A+ LL + +GL PD+ TY +LI GY GN++
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 483 AVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIGLLDAITYNTLIN 541
+ +YE MK+ KP L Y+ +I+ LC ++ + L + S + LL YN +++
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLL---VYNGVLH 673
Query: 542 GYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIP 601
Y ++G + +AF + +M I ++K YN LI K G + R L+ M + P
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Query: 602 DYVTYTTLV 610
+ TY +V
Sbjct: 734 EADTYNIIV 742
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 234/456 (51%), Gaps = 4/456 (0%)
Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
VKL+++G+ +L+ M +V +N++I LCK ++ +A L+ ML + P++
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249
Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
+ +N +I+ C+ G+ E + K+ +M D + P+ +T N ++ G K G VE AE +
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERM---KADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
M G + T++ L DGY+ +E AL + + V G+ N + ++ L
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
EG +E A +L + K + P+ Y+ + G CR G + A + ++ M D +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
YN LI C+ + A++ ++ M ++G+ P + TY LI GY + + + + M+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAIT-YNTLINGYFINGKIA 550
PN+V Y ++IN LCK + L A+ + + + G+ + YN LI+G GKI
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
+AF EM GI +N V YN LI+ L G +A +L+ + G+ PD TY +L+
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
+ + + + I L+++M SG+ P +TY+ +IS
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 224/439 (51%), Gaps = 4/439 (0%)
Query: 211 GYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFA 270
G + ++ L++ L K + ++++ +L+S P+ + I A ++ D+
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 271 LKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATL 330
L+LF +M D + P+ +N +I+G CK R+ AE++ M+ + ++ TY TL
Sbjct: 199 LELFNRM---KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 331 IDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHI 390
IDGY + G+ E++ ++ + M + P+ + +N+ + LF G VE A VL +M D
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 391 CPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQ 450
PD FT+SIL G N + A ++ ++ + +AY+ +IL+N LCK + A++
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 451 LLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLC 510
+L + +GL+P+ + Y T+IDGYC+ G++ GA E M+K KP+ + YN +I C
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 511 KDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKV 569
+ ++ A+ + + G+ ++ TYN LI GY + + F + EM + G N V
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 570 GYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDM 629
Y LIN LCK +A+ + + M G+ P Y L+ E+ +M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 630 VLSGVSPDNQTYNAIISPL 648
+ G+ + TYN +I L
Sbjct: 556 LKKGIELNLVTYNTLIDGL 574
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 180/362 (49%), Gaps = 7/362 (1%)
Query: 148 VFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEM 207
++ L+R ++G E A + K+K+KG S S+ +N + + E + + + KEM
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 208 VSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDL 267
G + NV ++ +I LCK KL EA + M G+ P V +NM+I+ C G +
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 268 EFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTY 327
E A + ++M + G + N VT+N +I+G G++ AE++ + + G+ +V TY
Sbjct: 546 EDAFRFSKEM-LKKGIEL--NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 328 ATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMID 387
+LI GY G+ + + L +EM + G+ P Y+ I EG +E + +M
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM-- 659
Query: 388 KHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAA 447
+ PD Y+ + +G +++AF L Q++E+ + D +YN LI K L
Sbjct: 660 -SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Query: 448 AKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIIN 507
+ L+ M R + P+ TY ++ G+C+ + A Y M++ ++ I N +++
Sbjct: 719 VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Query: 508 GL 509
GL
Sbjct: 779 GL 780
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 198/450 (44%), Gaps = 17/450 (3%)
Query: 112 DALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDALVRACTQIGATEGAYDVIQK 171
+AL G + A + E +GL+ +++ ++ + G GA I+
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLV-------PNEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 172 LKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECK 231
++ +G A+N + +L E+ K +M G +V T+N++I ++ +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
++ + M +G PNVV + +IN C+ L A + R M V P
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM---EDRGVSPKVRI 531
Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
+N +I+G C G++E A M+K GI+ N+ TY TLIDG + G EA L E+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
++GL P+ YNS I G+V+ + + +M I P TY +L + C K
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-----SLCTK 646
Query: 412 QAFKLHNQVLEE-HMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
+ +L ++ E + D YN +++ ++ A L MI + + D TY +L
Sbjct: 647 EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG- 529
I G K G + + + M E +P YN I+ G C+ +A + Q G
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEM 559
LLD N L++G + EA + SEM
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 8/304 (2%)
Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
RG++ + + +ST FA + F LS KH F+Y +L+ L + + +
Sbjct: 75 RGVLSSLLRSDSTP---FASPKELFSAFSLSSPSLKH----DFSYLLLSVLLNESKMISE 127
Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
A L + E + + S +L+++L K+ + +++ P YG I
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187
Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLD 532
K ++ ++++ MK P++ IYN +I+GLCK ++ A+ L LL
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247
Query: 533 A-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
+ ITYNTLI+GY G ++F + M+ I + + +N L+ L K G + A ++
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
K M G +PD T++ L +S N E + +++ V SGV + T + +++ L E
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 652 KSAE 655
E
Sbjct: 368 GKIE 371
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 34/227 (14%)
Query: 430 YSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYEN 489
+SY +L L +S ++ A L ++ G+ P + L+D K + V+ N
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 490 MKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKI 549
+ + + +P+ +Y I QA+ ++ +
Sbjct: 170 ILESDFRPSKFMYGKAI----------------QAAVKLS------------------DV 195
Query: 550 AEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTL 609
+ +F+ M++ I + YN+LI+ LCK A +L M+ ++P +TY TL
Sbjct: 196 GKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 610 VTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+ + K +PE+ ++ + M + P T+N ++ L ED
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 236/473 (49%), Gaps = 11/473 (2%)
Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKL------YKEMVSCGYVENVNTFNLVIYALCKE 229
G S A++N + L RF KL + MV C + ++ F+ ++ A+ K
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94
Query: 230 CKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNS 289
K + + L+ +M GI N+ N+++N C+ L AL KM + + P+
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE---PSI 151
Query: 290 VTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDE 349
VT ++NGFC+ RV A + M+ G NV Y T+IDG + + AL L +
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 350 MVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGC 409
M K G+ P+ V YNS I L + G A ++S M + I PD FT++ L + G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 410 VKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGT 469
V +A + + +++ + D +Y++LI LC + L A+++ M+ +G PD++TY
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 470 LIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIG 529
LI+GYCK +E ++++ M + N V Y +I G C+ L+ A+ + + G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 530 L-LDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAR 588
+ + ITYN L++G NGKI +A + ++M+ G+ + V YNI+I +CK G A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 589 ELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTY 641
++ + G++PD TYTT++ K E L M G+ P N+ Y
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP-NECY 503
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 221/430 (51%), Gaps = 6/430 (1%)
Query: 142 CKATPAV--FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
C+ P++ F L+ A +++ + + +++++ G ++ N L+ + +++
Sbjct: 75 CRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSL 134
Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
+M+ G+ ++ TF ++ C+ ++ +AL ++ +M+ G PNVV +N II+
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
C+ ++ AL L + M D + P+ VT+N +I+G C GR A + M K
Sbjct: 195 GLCKSKQVDNALDLLNR---MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
I +V T+ LID + G EA +EM++R L P+ V Y+ I+ L ++ A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
+ M+ K PD TYSIL G C++ V+ KL ++ + +V + +Y ILI
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
C++ L A+++ M+ G+ P+IITY L+ G C G IE A+ + +M+K ++
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSE 558
V YN II G+CK + A + + GL+ D TY T++ G + G EA A+F +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 559 MRNVGIAVNK 568
M+ GI N+
Sbjct: 492 MKEDGILPNE 501
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 217/416 (52%), Gaps = 4/416 (0%)
Query: 231 KLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSV 290
KL+++L L++ M++ P++ F+ +++ ++ + + L+ +M ++ + N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG---IPHNLC 117
Query: 291 THNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEM 350
T N ++N FC+ ++ A MIK G + ++ T+ +L++G+ RG +AL + D+M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 351 VKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCV 410
V G PN V+YN+ I L V+ AL +L+ M I PD TY+ L GLC +G
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 411 KQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTL 470
A ++ + + + + D +++N LI+ K ++ A++ MI R L PDI+TY L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 471 IDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLL-QASQRIG 529
I G C ++ A +++ M P++V Y+ +ING CK ++ L + SQR
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 530 LLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARE 589
+ + +TY LI GY GK+ A +F M G+ N + YN+L++ LC G ++A
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 590 LMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
++ M +G+ D VTY ++ K + +++ + G+ PD TY ++
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
Query: 433 NILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
NIL+N C+ + L+ A L MI G P I+T+G+L++G+C+G + A+ +++ M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 493 VEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAE 551
+ KPN+VIYN+II+GLCK +D A LL ++ G+ D +TYN+LI+G +G+ ++
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 552 AFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVT 611
A M S M I + +N LI+ K G +A E + MI + PD VTY+ L+
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 612 RFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAE 655
+E E+ MV G PD TY+ +I+ K E
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 1/327 (0%)
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
++ ++ L+ ++ + + L ++M G+ N N ++ + AL L
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
MI P T+ L G CR V A + +Q++ + YN +I+ LCKS
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+ A LL+ M G+ PD++TY +LI G C G A ++ M K E P++ +
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMRN 561
N++I+ K+ + A+ + R L D +TY+ LI G + ++ EA MF M +
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 562 VGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEE 621
G + V Y+ILIN CK + +L M G++ + VTYT L+ + +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 622 VIELHDDMVLSGVSPDNQTYNAIISPL 648
E+ MV GV P+ TYN ++ L
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGL 406
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 58/347 (16%)
Query: 99 AIVHLLVNWRRFDDALLLMGNLMSANSVSPL-----EFLEGLLDSYEICKATPAV----- 148
I+ L ++ D+AL L+ N M + + P + GL S AT V
Sbjct: 191 TIIDGLCKSKQVDNALDLL-NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 149 ---------FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGR 199
F+AL+ AC + G A +
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEE-------------------------------- 277
Query: 200 FWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIIN 259
Y+EM+ ++ T++L+IY LC +L+EA ++ M+ G +P+VV ++++IN
Sbjct: 278 ---FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 260 EACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
C+ +E +KLF + MS V+ N+VT+ +I G+C+ G++ AEEI M+ G
Sbjct: 335 GYCKSKKVEHGMKLFCE---MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
+ N+ TY L+ G G E+AL + +M K G+ + V YN I + G+V A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
+ + + + PD +TY+ + GL + G ++A L ++ E+ ++
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 461 IPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKS 520
+P I + L+ K + + ++E M+ + NL N ++N C+ + L A S
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 521 LLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLC 579
L ++G +I T+ +L+NG+ ++ +A MF +M +G N V YN +I+ LC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 580 KFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQ 639
K A +L+ M GI PD VTY +L++ + + + M + PD
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 640 TYNAIISPLLGE 651
T+NA+I + E
Sbjct: 258 TFNALIDACVKE 269
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 3/147 (2%)
Query: 512 DASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGY 571
D SLD ++Q + D ++ L++ K ++ +M+ +GI N
Sbjct: 63 DDSLDLFFHMVQCRPLPSIAD---FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 572 NILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVL 631
NIL+N C+ A + MI G P VT+ +L+ F + + + + D MV
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 632 SGVSPDNQTYNAIISPLLGEKSAEDQV 658
G P+ YN II L K ++ +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNAL 206
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 247/501 (49%), Gaps = 9/501 (1%)
Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVK---LNEIGRFWKLYK 205
+ +V A + G TE A + K+ G + H + L + L + + + +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 206 EMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVG 265
+ V+C N +++++I+ LC+ +LEEA L +M + G P+ + ++I C G
Sbjct: 258 KEVTCA--PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRG 315
Query: 266 DLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVR 325
++ A LF +M + G PN T+ +I+G C+ G++E A + M+K I +V
Sbjct: 316 LIDKAFNLFDEM-IPRG--CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Query: 326 TYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDM 385
TY LI+GY + G A L M KR PN +N + L G A+ +L M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 386 IDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNL 445
+D + PD +Y++L GLCR G + A+KL + + + D ++ +IN CK
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 446 AAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSI 505
A L M+ +G+ D +T TLIDG CK G A+ + E + K+ N I
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 506 INGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMFSEMRNVGI 564
++ L K + ++L ++GL+ ++ TY TL++G +G I +F + M+ G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 565 AVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIE 624
N Y I+IN LC+FG ++A +L+ M G+ P++VTYT +V + N + +E
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 625 LHDDMVLSGVSPDNQTYNAII 645
MV G +++ Y++++
Sbjct: 673 TVRAMVERGYELNDRIYSSLL 693
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 251/512 (49%), Gaps = 11/512 (2%)
Query: 143 KATPAVFDALVRACTQIGAT--EGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRF 200
+ AV AL++ C++ + Y + +V G ++ +++ L L KL+
Sbjct: 120 RVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179
Query: 201 WKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINE 260
+ Y+ M + G+V + + ++ ALCK E A ++LK G + ++
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239
Query: 261 ACQVGDLEFALKLFRKMGVMSGD-SVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAG 319
C+ +L ALK+F VMS + + PNSV+++ +I+G C++GR+E A ++ M + G
Sbjct: 240 FCRGLNLRDALKVF---DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 320 IDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGAL 379
+ RTY LI G ++A L DEM+ RG PN Y I L +G +E A
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 380 FVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYL 439
V M+ I P TY+ L G C++G V AF+L + + + ++N L+ L
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 440 CKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNL 499
C+ A LL M+ GL PDI++Y LIDG C+ G++ A ++ +M + +P+
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 500 VIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSE 558
+ + +IIN CK D A + L R G+ LD +T TLI+G GK +A +
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 559 MRNVGIAVNKVGYNILINFLCKFGC--YQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
+ + I N++++ L K GC ++ L K+ L G++P VTYTTLV ++
Sbjct: 537 LVKMRILTTPHSLNVILDMLSK-GCKVKEELAMLGKINKL-GLVPSVVTYTTLVDGLIRS 594
Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
+ + M LSG P+ Y II+ L
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 217/436 (49%), Gaps = 4/436 (0%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C + L+ ++G E A+ + ++ KG S + + L I + +
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
L+ EM+ G NV+T+ ++I LC++ K+EEA + +M+K I+P+V+ +N +IN
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
C+ G + A +L + VM + PN T N ++ G C++G+ A + M+ G+
Sbjct: 382 CKDGRVVPAFEL---LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
++ +Y LIDG R G A +L M + P+ + + + I+ +G + A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
L M+ K I D T + L G+C+ G + A + +++ ++ +S N++++ L K
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ +L + GL+P ++TY TL+DG + G+I G+ ++ E MK PN+
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
Y IINGLC+ ++ A+ LL A Q G+ + +TY ++ GY NGK+ A M
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 561 NVGIAVNKVGYNILIN 576
G +N Y+ L+
Sbjct: 679 ERGYELNDRIYSSLLQ 694
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 229/510 (44%), Gaps = 23/510 (4%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
CK + L+ + G E A V +K+ S+ +N ++ K + +
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
+L M NV TFN ++ LC+ K +A+ L RML +G+ P++V +N++I+
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
C+ G + A KL M + P+ +T IIN FCK G+ + A M++ GI
Sbjct: 452 CREGHMNTAYKLLSSMNCFD---IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 322 CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFV 381
+ T TLIDG + G + +AL + + +VK ++ N + L V+ L +
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 382 LSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCK 441
L + + P TY+ L GL R+G + +F++ + + + Y Y I+IN LC+
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
+ A++LLS+M G+ P+ +TY ++ GY G ++ A++ M + + N I
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI 688
Query: 502 YNSIINGLC-------------------KDASLDAAKSLLQASQRIGLLDAITYNTLING 542
Y+S++ G ++ + L+ +++G + L+
Sbjct: 689 YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR 748
Query: 543 YFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPD 602
G+ E+ + + G+ + K +I++ C + + EL+ +++ G +P
Sbjct: 749 LCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPS 807
Query: 603 YVTYTTLVTRFSKNCSPEEVIELHDDMVLS 632
+ ++ ++ K E EL +++ S
Sbjct: 808 FKSFCLVIQGLKKEGDAERARELVMELLTS 837
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 144/309 (46%), Gaps = 2/309 (0%)
Query: 349 EMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNG 408
M G + + Y + ++ L G E A +S ++ D + L G CR
Sbjct: 185 RMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL 244
Query: 409 CVKQAFKLHNQVLEEHMVG-DAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
++ A K+ + + +E ++ SY+ILI+ LC+ L A L M +G P TY
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQR 527
LI C G I+ A +++ M KPN+ Y +I+GLC+D ++ A + + +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 528 IGLLDA-ITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
+ + ITYN LINGY +G++ AF + + M N +N L+ LC+ G +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
A L+K M+ +G+ PD V+Y L+ + +L M + PD T+ AII+
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 647 PLLGEKSAE 655
+ A+
Sbjct: 485 AFCKQGKAD 493
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIG-LLDAITYNTLINGYFINGKIAEAFAMFS 557
++ Y +I+N LCK+ +AA+ + +IG +LD+ +L+ G+ + +A +F
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 558 EM-RNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
M + V A N V Y+ILI+ LC+ G ++A L M G P TYT L+
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
++ L D+M+ G P+ TY +I L + E+
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 220/423 (52%), Gaps = 7/423 (1%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI ++ LS + K L+ M CG ++ ++N+VI LC+ + ALS+
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
+M+K G P+VV + +IN CQ + A+ L KM M P+ V +N II+G
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM---GFRPDVVIYNTIIDGS 184
Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
CK+G V A E+ M + G+ + TY +L+ G G +A RL +MV R ++PN
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
+ + + I EG A+ + +M + + PD FTY+ L GLC +G V +A ++ +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
++ + + D +YN LIN CKS + +L M RGL+ D ITY T+I GY + G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
+ A +++ M + +PN+ Y+ ++ GLC + ++ A L + Q+ + LD TYN
Sbjct: 365 PDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
+I+G G + +A+ +F + G+ + V Y +I+ C+ + ++ L + M G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 599 IIP 601
++P
Sbjct: 482 LLP 484
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 226/434 (52%), Gaps = 5/434 (1%)
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L+ +M+ + ++ F+ V+ + K + +SL++ M GI ++ +N++IN C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ AL + KM + P+ VT + +INGFC+ RV A ++ M + G
Sbjct: 116 RCSRFVIALSVVGKMMKFGYE---PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
+V Y T+IDG + G +A+ L D M + G+ + V YNS + L G A ++
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
DM+ + I P+ T++ + + G +A KL+ ++ + D ++YN LIN LC
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
+ AKQ+L M+ +G +PD++TY TLI+G+CK ++ +++ M + + + Y
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 503 NSIINGLCKDASLDAAKSLLQASQRIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNV 562
N+II G + DAA+ + S+ + TY+ L+ G +N ++ +A +F M+
Sbjct: 353 NTIIQGYFQAGRPDAAQEIF--SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 563 GIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEV 622
I ++ YNI+I+ +CK G + A +L + + G+ PD V+YTT+++ F + ++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 623 IELHDDMVLSGVSP 636
L+ M G+ P
Sbjct: 471 DLLYRKMQEDGLLP 484
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 230/427 (53%), Gaps = 13/427 (3%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVI----QKLKVKGHSVSIHAWNNFLSHLVKLNEIG 198
+ P++ D + ++I ++ YD++ ++V G ++++N ++ L + +
Sbjct: 64 RPLPSIVD-FSKVLSKIAKSKN-YDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 121
Query: 199 RFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMII 258
+ +M+ GY +V T + +I C+ ++ +A+ L +M + G P+VV +N II
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 259 NEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
+ +C++G + A++LF + M D V ++VT+N ++ G C GR A + M+
Sbjct: 182 DGSCKIGLVNDAVELFDR---MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 319 GIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGA 378
I NV T+ +ID + + G EA++L +EM +R + P+ YNS I+ L G V+ A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 379 LFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINY 438
+L M+ K PD TY+ L G C++ V + KL ++ + +VGD +YN +I
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 439 LCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPN 498
++ AA+++ S M R P+I TY L+ G C +E A+ ++ENM+K E + +
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 499 LVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFS 557
+ YN +I+G+CK +++ A L ++ GL D ++Y T+I+G+ + ++ ++
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 558 EMRNVGI 564
+M+ G+
Sbjct: 476 KMQEDGL 482
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 209/426 (49%), Gaps = 42/426 (9%)
Query: 232 LEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVT 291
LEE + L+ +M++S P++V F+ ++++ + + + + LF M V + + +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCG---IGHDLYS 106
Query: 292 HNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMV 351
+N +IN C+ R A + M+K G + +V T ++LI+G+ +G +A+ L +M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 352 KRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVK 411
+ G P+ V+ Y+ + G C+ G V
Sbjct: 167 EMGFRPDVVI-----------------------------------YNTIIDGSCKIGLVN 191
Query: 412 QAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLI 471
A +L +++ + + DA +YN L+ LC S + A +L+ M++R ++P++IT+ +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 472 DGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL 531
D + K G A+++YE M + P++ YNS+INGLC +D AK +L G L
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 532 -DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQAREL 590
D +TYNTLING+ + ++ E +F EM G+ + + YN +I + G A+E+
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 591 MKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLG 650
M P+ TY+ L+ N E+ + L ++M S + D TYN +I +
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 651 EKSAED 656
+ ED
Sbjct: 429 IGNVED 434
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 198/401 (49%), Gaps = 23/401 (5%)
Query: 92 HSLESSCAIVHLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAVFDA 151
H L S +++ L RF AL ++G +M + + L++ + C+ VFDA
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF--CQGN-RVFDA 158
Query: 152 LVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCG 211
+ D++ K++ G + +N + K+ + +L+ M G
Sbjct: 159 I--------------DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 212 YVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFAL 271
+ T+N ++ LC + +A L M+ I PNV+ F +I+ + G A+
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 272 KLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLI 331
KL+ + M+ V P+ T+N +ING C GRV+ A+++ M+ G +V TY TLI
Sbjct: 265 KLYEE---MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 332 DGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHIC 391
+G+ + +E +L EM +RGL+ + + YN+ I F G + A + S M +
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--- 378
Query: 392 PDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQL 451
P+ TYSIL GLC N V++A L + + + D +YNI+I+ +CK N+ A L
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Query: 452 LSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKK 492
S+ +GL PD+++Y T+I G+C+ + + +Y M++
Sbjct: 439 FRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 139/284 (48%), Gaps = 6/284 (2%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
+A +++LV G A +++ + ++ ++ + + VK + K
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
LY+EM +V T+N +I LC +++EA + M+ G P+VV +N +IN C
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
+ ++ KLFR+ M+ ++ +++T+N II G+ + GR + A+EI M
Sbjct: 326 KSKRVDEGTKLFRE---MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--- 379
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
N+RTY+ L+ G E+AL L + M K + + YN IH + G+VE A +
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMV 426
+ K + PD +Y+ + G CR ++ L+ ++ E+ ++
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 1/211 (0%)
Query: 442 SNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVI 501
S NL L MI +P I+ + ++ K N + + ++ +M+ +L
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 502 YNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNTLINGYFINGKIAEAFAMFSEMR 560
YN +IN LC+ + A S++ + G D +T ++LING+ ++ +A + S+M
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 561 NVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPE 620
+G + V YN +I+ CK G A EL M G+ D VTY +LV +
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 621 EVIELHDDMVLSGVSPDNQTYNAIISPLLGE 651
+ L DMV+ + P+ T+ A+I + E
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/581 (25%), Positives = 266/581 (45%), Gaps = 41/581 (7%)
Query: 102 HLLVNWRRFDDALLLMGNLMSANSVSPLEFLEGLLDSYEICKATPAV--FDALVRACTQI 159
H LV R F ++ ++ SV +E LL C P V F L+ +
Sbjct: 240 HRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKL---------------- 203
G + A+D+ + ++ +G + A++ + K +G KL
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 204 -------------------YKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLK 244
YK M+ G NV T+ ++I LC++ ++ EA +Y ++LK
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 245 SGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGR 304
G+ P++V ++ +I+ C+ G+L L+ M M P+ V + +++G K G
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG---YPPDVVIYGVLVDGLSKQGL 476
Query: 305 VEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNS 364
+ A M+ I NV + +LIDG+ R +EAL++ M G+ P+ + +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 365 TIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEH 424
+ EG +E ALF+ M + PD Y L C++ +L + +
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 425 MVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAV 484
+ D N++I+ L K + + A + +++I + PDI+TY T+I GYC ++ A
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 485 QVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQ-ASQRIGLLDAITYNTLINGY 543
+++E +K PN V +I+ LCK+ +D A + +++ +A+TY L++ +
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
+ I +F +F EM+ GI+ + V Y+I+I+ LCK G +A + I ++PD
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAI 644
V Y L+ + K E L++ M+ +GV PD+ A+
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 150/594 (25%), Positives = 275/594 (46%), Gaps = 21/594 (3%)
Query: 57 SLTNSLVNRVVSEFRKSPKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLL 116
+L + N V+ P AL+++ W S S I H+L+ FD A +
Sbjct: 66 NLQRNETNLVLLSLESEPNSALKYFRWA----EISGKDPSFYTIAHVLIRNGMFDVADKV 121
Query: 117 MGNLMSANSVSPLEFLEGLLD---SYEICKATPAVFDALVRACTQIGATEGAYDVIQKLK 173
+++ N L + D ++CK L+ C + G + A ++
Sbjct: 122 FDEMIT-NRGKDFNVLGSIRDRSLDADVCKF-------LMECCCRYGMVDKALEIFVYST 173
Query: 174 VKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGY-VENVNTFNLVIYALCKECKL 232
G + + L+ L+ + + + ++ G V+ V+ AL + ++
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEV 233
Query: 233 EEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTH 292
+AL + +++ G +V N ++ + V +E A +L + ++ PN VT
Sbjct: 234 TKALDFHRLVMERGFRVGIVSCNKVL-KGLSVDQIEVASRL---LSLVLDCGPAPNVVTF 289
Query: 293 NCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVK 352
+INGFCK G ++ A ++ M + GI+ ++ Y+TLIDGY + G +L + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 353 RGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQ 412
+G+ + VV++STI GD+ A V M+ + I P+ TY+IL KGLC++G + +
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 413 AFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLID 472
AF ++ Q+L+ M +Y+ LI+ CK NL + L MI G PD++ YG L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 473 GYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-L 531
G K G + A++ M + N+V++NS+I+G C+ D A + + G+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 532 DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELM 591
D T+ T++ + G++ EA +F M +G+ + + Y LI+ CK +L
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 592 KVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAII 645
+M + I D ++ K E+ + ++++ + PD TYN +I
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 235/525 (44%), Gaps = 40/525 (7%)
Query: 160 GATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTF 219
G A D + + +G V I + N L L +++I +L ++ CG NV TF
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 220 NLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGV 279
+I CK +++ A L+ M + GI P+++ ++ +I+ + G L KLF + +
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ-AL 348
Query: 280 MSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGS 339
G V + V + I+ + K G + A + M+ GI NV TY LI G + G
Sbjct: 349 HKG--VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 340 SEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSI 399
EA + +++KRG+ P+ V Y+S I G++ + DMI PD Y +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
L GL + G + A + ++L + + + +N LI+ C+ N A ++ M + G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
+ PD+ T+ T++ G +E A+ ++ M K+ +P+ + Y ++I+ CK
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 520 SLLQASQR-------------IGLL-----------------------DAITYNTLINGY 543
L QR I LL D +TYNT+I GY
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 544 FINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDY 603
++ EA +F ++ N V ILI+ LCK A + +M G P+
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 604 VTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIISPL 648
VTY L+ FSK+ E +L ++M G+SP +Y+ II L
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 190/402 (47%), Gaps = 12/402 (2%)
Query: 262 CQVGDLEFALKLF---RKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKA 318
C+ G ++ AL++F ++GV V+P + ++N RV+ + + +
Sbjct: 157 CRYGMVDKALEIFVYSTQLGV-----VIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCRG 210
Query: 319 GID-CNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEG 377
GI+ V + ++D G +AL +++RG V N + L + +E
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
A +LS ++D P+ T+ L G C+ G + +AF L + + + D +Y+ LI+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
K+ L +L S + +G+ D++ + + ID Y K G++ A VY+ M P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLLDAI-TYNTLINGYFINGKIAEAFAMF 556
N+V Y +I GLC+D + A + + G+ +I TY++LI+G+ G + FA++
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
+M +G + V Y +L++ L K G A M+ I + V + +L+ + +
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAEDQV 658
+E +++ M + G+ PD T+ ++ + E E+ +
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Query: 74 PKLALEFYTWVGENNRFSHSLESSCAIVHLLVNWRRFDDALLLMGNL----MSANSVS-- 127
P + L+ + + + N+ S + ++HLL R +DA NL M + V+
Sbjct: 582 PTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 128 -------PLEFLEGLLDSYEICKATP-----AVFDALVRACTQIGATEGAYDVIQKLKVK 175
L L+ +E+ K TP L+ + +GA + + K
Sbjct: 641 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Query: 176 GHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEA 235
G + + + K +I +KL++EM G ++ +++++I LCK +++EA
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 236 LSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKM 277
+++++ + + + P+VV + ++I C+VG L A L+ M
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 222/422 (52%), Gaps = 4/422 (0%)
Query: 228 KECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLP 287
++ KL +A+ L+ M+KS +P++V FN +++ ++ + + L +KM V+ +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRN 118
Query: 288 NSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLC 347
+ T N +IN FC +V A I M+K G + + T +L++G+ R +A+ L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 348 DEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRN 407
D+MV+ G P+ V YN+ I L V A ++ K I P+ TY+ L GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 408 GCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITY 467
A +L + ++++ + + +Y+ L++ K+ + AK+L M+ + PDI+TY
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 468 GTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASL-DAAKSLLQASQ 526
+LI+G C I+ A Q+++ M ++V YN++ING CK + D K + SQ
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 527 RIGLLDAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQ 586
R + + +TYNTLI G+F G + +A FS+M GI+ + YNIL+ LC G ++
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 587 ARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDNQTYNAIIS 646
A + + M + D VTYTT++ K EE L + L G+ PD TY ++S
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 647 PL 648
L
Sbjct: 479 GL 480
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 216/429 (50%), Gaps = 4/429 (0%)
Query: 180 SIHAWNNFLSHLVKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLY 239
SI +N LS +VKL + L K+M G ++ TFN+VI C ++ ALS+
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 240 YRMLKSGIWPNVVCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGF 299
+MLK G P+ V ++N C+ + A+ L KM + P+ V +N II+
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI---GYKPDIVAYNAIIDSL 200
Query: 300 CKLGRVEFAEEIRYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNN 359
CK RV A + + + GI NV TY L++G +A RL +M+K+ + PN
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 360 VVYNSTIHWLFAEGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQ 419
+ Y++ + G V A + +M+ I PD TYS L GLC + + +A ++ +
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 420 VLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGN 479
++ + + D SYN LIN CK+ + +L M RGL+ + +TY TLI G+ + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 480 IEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGL-LDAITYNT 538
++ A + + M P++ YN ++ GLC + L+ A + + Q+ + LD +TY T
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 539 LINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHG 598
+I G GK+ EA+++F + G+ + V Y +++ LC G + L M G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 599 IIPDYVTYT 607
++ + T +
Sbjct: 501 LMKNDCTLS 509
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 226/450 (50%), Gaps = 7/450 (1%)
Query: 192 VKLNEIGRFWKLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNV 251
+KLN+ L+ +MV ++ FN ++ A+ K K + +SL +M GI ++
Sbjct: 64 IKLNDA---IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 252 VCFNMIINEACQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEI 311
FN++IN C + AL + KM + + P+ VT ++NGFC+ RV A +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYE---PDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 312 RYAMIKAGIDCNVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFA 371
M++ G ++ Y +ID + +A E+ ++G+ PN V Y + ++ L
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 372 EGDVEGALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYS 431
A +LSDMI K I P+ TYS L +NG V +A +L +++ + D +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 432 YNILINYLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMK 491
Y+ LIN LC + + A Q+ M+ +G + D+++Y TLI+G+CK +E ++++ M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 492 KVEKKPNLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIA 550
+ N V YN++I G + +D A+ G+ D TYN L+ G NG++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 551 EAFAMFSEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLV 610
+A +F +M+ + ++ V Y +I +CK G ++A L + L G+ PD VTYTT++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 611 TRFSKNCSPEEVIELHDDMVLSGVSPDNQT 640
+ EV L+ M G+ ++ T
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 215/420 (51%), Gaps = 4/420 (0%)
Query: 149 FDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWKLYKEMV 208
F+ L+ A ++ + + +K++V G ++ +N ++ ++ + +M+
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 209 SCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEACQVGDLE 268
GY + T ++ C+ ++ +A+SL +M++ G P++V +N II+ C+ +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 269 FALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDCNVRTYA 328
A F+++ + PN VT+ ++NG C R A + MIK I NV TY+
Sbjct: 208 DAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 329 TLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVLSDMIDK 388
L+D + + G EA L +EMV+ + P+ V Y+S I+ L ++ A + M+ K
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 389 HICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAA 448
D +Y+ L G C+ V+ KL ++ + +V + +YN LI ++ ++ A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 449 KQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIING 508
++ S M G+ PDI TY L+ G C G +E A+ ++E+M+K E ++V Y ++I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 509 LCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVN 567
+CK ++ A SL + GL D +TY T+++G G + E A++++M+ G+ N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 179/371 (48%), Gaps = 13/371 (3%)
Query: 143 KATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFWK 202
K ++A++ + + A+D ++++ KG ++ + ++ L + +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 203 LYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEAC 262
L +M+ NV T++ ++ A K K+ EA L+ M++ I P++V ++ +IN C
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 263 QVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGIDC 322
++ A ++F +M L + V++N +INGFCK RVE ++ M + G+
Sbjct: 307 LHDRIDEANQMF---DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 323 NVRTYATLIDGYARGGSSEEALRLCDEMVKRGLMPNNVVYNSTIHWLFAEGDVEGALFVL 382
N TY TLI G+ + G ++A +M G+ P+ YN + L G++E AL +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 383 SDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKS 442
DM + + D TY+ + +G+C+ G V++A+ L + + + D +Y +++ LC
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 443 NNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIY 502
L + L + M GL+ + D G+I + ++ + M P+L+
Sbjct: 484 GLLHEVEALYTKMKQEGLMKN--------DCTLSDGDITLSAELIKKMLSCGYAPSLL-- 533
Query: 503 NSIINGLCKDA 513
I +G+CK A
Sbjct: 534 KDIKSGVCKKA 544
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 1/280 (0%)
Query: 378 ALFVLSDMIDKHICPDHFTYSILTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILIN 437
A+ + SDM+ P ++ L + + L ++ + D Y++NI+IN
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 438 YLCKSNNLAAAKQLLSSMIVRGLIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKP 497
C ++ A +L M+ G PD +T G+L++G+C+ + AV + + M ++ KP
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 498 NLVIYNSIINGLCKDASLDAAKSLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMF 556
++V YN+II+ LCK ++ A + +R G+ + +TY L+NG + + ++A +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 557 SEMRNVGIAVNKVGYNILINFLCKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKN 616
S+M I N + Y+ L++ K G +A+EL + M+ I PD VTY++L+ +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 617 CSPEEVIELHDDMVLSGVSPDNQTYNAIISPLLGEKSAED 656
+E ++ D MV G D +YN +I+ K ED
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 1/250 (0%)
Query: 400 LTKGLCRNGCVKQAFKLHNQVLEEHMVGDAYSYNILINYLCKSNNLAAAKQLLSSMIVRG 459
L+K R+ + A L + +++ +N L++ + K L M V G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 460 LIPDIITYGTLIDGYCKGGNIEGAVQVYENMKKVEKKPNLVIYNSIINGLCKDASLDAAK 519
+ D+ T+ +I+ +C + A+ + M K+ +P+ V S++NG C+ + A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 520 SLLQASQRIGLL-DAITYNTLINGYFINGKIAEAFAMFSEMRNVGIAVNKVGYNILINFL 578
SL+ IG D + YN +I+ ++ +AF F E+ GI N V Y L+N L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 579 CKFGCYQQARELMKVMILHGIIPDYVTYTTLVTRFSKNCSPEEVIELHDDMVLSGVSPDN 638
C + A L+ MI I P+ +TY+ L+ F KN E EL ++MV + PD
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 639 QTYNAIISPL 648
TY+++I+ L
Sbjct: 296 VTYSSLINGL 305
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 142 CKATPAVFDALVRACTQIGATEGAYDVIQKLKVKGHSVSIHAWNNFLSHLVKLNEIGRFW 201
C A ++ L+ + E + +++ +G + +N + + ++ +
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 202 KLYKEMVSCGYVENVNTFNLVIYALCKECKLEEALSLYYRMLKSGIWPNVVCFNMIINEA 261
+ + +M G ++ T+N+++ LC +LE+AL ++ M K + ++V + +I
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 262 CQVGDLEFALKLFRKMGVMSGDSVLPNSVTHNCIINGFCKLGRVEFAEEIRYAMIKAGID 321
C+ G +E A LF + + + P+ VT+ +++G C G + E + M + G+
Sbjct: 446 CKTGKVEEAWSLFCSLSL---KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL- 501
Query: 322 CNVRTYATLIDG 333
++ TL DG
Sbjct: 502 --MKNDCTLSDG 511
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 236,749,926
Number of Sequences: 539616
Number of extensions: 9750407
Number of successful extensions: 36020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 22398
Number of HSP's gapped (non-prelim): 3287
length of query: 658
length of database: 191,569,459
effective HSP length: 124
effective length of query: 534
effective length of database: 124,657,075
effective search space: 66566878050
effective search space used: 66566878050
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)