Your job contains 1 sequence.
>006157
MSRQSSQAAAAQMNLLQQQRYLQLQQQHQQQQLLKAMPQQRPQLPQHFVQQQNLPLRSPA
KPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQAT
GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNASGQI
VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL
GAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQ
ISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSQQPEDQLQQQQQQQQTV
GQNSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVN
NASSPYGGSSVQMPSPGSSNNIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTAANHMSSA
SSPANISVQQPALSGEADPRALSGDADPSDSQSAVQKILHEMMLCSHLNGGSGGGGGMVG
VGSLGNDVKNVNDIMATGNNTVLNGGNGLVGNGTVNNNPGIGTGGYGNMGGGLGQSAMVN
GIRAAMGNNSMMNGRVGMTAMARDQSMNHQQDLGNQLLNGLGAVNGFNNLQFDWKPSP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006157
(658 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2029137 - symbol:SEU "seuss" species:3702 "Ara... 1467 6.2e-157 2
TAIR|locus:2174028 - symbol:SLK2 "AT5G62090" species:3702... 846 1.7e-84 1
TAIR|locus:2131804 - symbol:SLK1 "SEUSS-like 1" species:3... 790 2.2e-84 2
TAIR|locus:504955415 - symbol:SLK3 "SEUSS-like 3" species... 817 4.5e-84 2
POMBASE|SPBC30B4.03c - symbol:adn1 "adhesion defective pr... 135 9.1e-06 2
DICTYBASE|DDB_G0271670 - symbol:DDB_G0271670 species:4468... 125 8.4e-05 1
UNIPROTKB|Q1EQW7 - symbol:ldb2 "LIM domain-binding protei... 94 0.00099 3
>TAIR|locus:2029137 [details] [associations]
symbol:SEU "seuss" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003712 "transcription
cofactor activity" evidence=IMP] [GO:0007275 "multicellular
organismal development" evidence=IMP] [GO:0060090 "binding,
bridging" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0009909 "regulation of
flower development" evidence=IGI] [GO:0009790 "embryo development"
evidence=IMP] [GO:0048467 "gynoecium development" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0042744 "hydrogen
peroxide catabolic process" evidence=RCA] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0009790 GO:GO:0048481
GO:GO:0009909 GO:GO:0060090 EMBL:AC006423 EMBL:AF378782
EMBL:AK118277 IPI:IPI00526697 PIR:D96502 RefSeq:NP_001117434.1
RefSeq:NP_175051.1 UniGene:At.12073 ProteinModelPortal:Q8W234
IntAct:Q8W234 STRING:Q8W234 PaxDb:Q8W234 PRIDE:Q8W234
EnsemblPlants:AT1G43850.1 EnsemblPlants:AT1G43850.2 GeneID:840981
KEGG:ath:AT1G43850 TAIR:At1g43850 eggNOG:NOG286988
HOGENOM:HOG000006265 InParanoid:Q8W234 OMA:MPAPQNT PhylomeDB:Q8W234
ProtClustDB:CLSN2698476 Genevestigator:Q8W234 GermOnline:AT1G43850
Uniprot:Q8W234
Length = 877
Score = 1467 (521.5 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 309/502 (61%), Positives = 350/502 (69%)
Query: 41 RPQLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYF 100
RPQLPQ F QQQNLPLR P KPVYEPGM A+RLT YMY+QQHRPEDNNIEFWRKFVAEYF
Sbjct: 279 RPQLPQQF-QQQNLPLRPPLKPVYEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYF 337
Query: 101 APNAKKKWCVSMYGSGRQATGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGT 160
APNAKK+WCVSMYGSGRQ TGVFPQDVWHCEICNRKPGRGFEAT EVLPRLFKIKYESGT
Sbjct: 338 APNAKKRWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGT 397
Query: 161 LEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFC 220
LEELLYVDMPRE QN+SGQIVL+YAKA QESVFE LRVVRDGQLRIVFSPDLKI SWEFC
Sbjct: 398 LEELLYVDMPRESQNSSGQIVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFC 457
Query: 221 ARRHEELIPRRLLIPQVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKA 280
ARRHEELIPRRLLIPQVSQLG+AAQKYQ A QNA+++ + PELQNNCNMFVASARQLAKA
Sbjct: 458 ARRHEELIPRRLLIPQVSQLGSAAQKYQQAAQNATTDSALPELQNNCNMFVASARQLAKA 517
Query: 281 LEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFH 340
LEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSR T TGP+ESLAKFPRRT +S
Sbjct: 518 LEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPIESLAKFPRRTGPSSALP 577
Query: 341 SPSXXXXXXXXXXXXXXXXXXXNSNSESSVQANAMQLATSNG--------VA-------- 384
PS + Q Q + N VA
Sbjct: 578 GPSPQQASDQLRQQQQQQQQQQQQQQQQQQQQQQQQTVSQNTNSDQSSRQVALMQGNPSN 637
Query: 385 NVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIPQ 444
VN + N ASAS++ S+I GL+HQNSM R QN N + SP N++
Sbjct: 638 GVNYAFNAASASTSTSSIAGLIHQNSMKGRHQNAAYNPPN----------SPYGGNSVQM 687
Query: 445 AXXXXXXXXXXXXXXXXXXXXXXXXALTAANHMSSASSPANISVQQPALSGEADPRAL-- 502
+++N+ ++P+ + G + A+
Sbjct: 688 QSPSSSGTMVPSSSQQQHNLPTFQSPTSSSNN----NNPSQNGIPSVNHMGSTNSPAMQQ 743
Query: 503 SGDADPSDSQSAVQKILHEMML 524
+G+ D ++S S+VQKIL+E+++
Sbjct: 744 AGEVDGNES-SSVQKILNEILM 764
Score = 84 (34.6 bits), Expect = 6.2e-157, Sum P(2) = 6.2e-157
Identities = 19/30 (63%), Positives = 20/30 (66%)
Query: 595 QSAMVNGIRAAMGNNSMMNGRVGMTAMARD 624
QS NGI GNNS+MNGRVGM M RD
Sbjct: 825 QSMAANGINNINGNNSLMNGRVGM--MVRD 852
>TAIR|locus:2174028 [details] [associations]
symbol:SLK2 "AT5G62090" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009790 "embryo development"
evidence=IMP] [GO:0048467 "gynoecium development" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009790 GO:GO:0048481 EMBL:AY039981
EMBL:AY150458 IPI:IPI00549014 RefSeq:NP_201015.1 RefSeq:NP_851245.1
UniGene:At.20029 UniGene:At.20808 ProteinModelPortal:Q94BP0
IntAct:Q94BP0 PaxDb:Q94BP0 PRIDE:Q94BP0 EnsemblPlants:AT5G62090.1
EnsemblPlants:AT5G62090.2 GeneID:836329 KEGG:ath:AT5G62090
TAIR:At5g62090 eggNOG:NOG255150 HOGENOM:HOG000082642
InParanoid:Q94BP0 OMA:IMVLEYG PhylomeDB:Q94BP0
ProtClustDB:CLSN2687312 ArrayExpress:Q94BP0 Genevestigator:Q94BP0
Uniprot:Q94BP0
Length = 816
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 187/411 (45%), Positives = 255/411 (62%)
Query: 43 QLPQHFVQQQNLPLRSPAKP-VYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFA 101
Q Q +QQQ + ++ P YE +CARRL Y+Y Q+ RP +++I +WRKFV EYF+
Sbjct: 265 QQQQQQLQQQGMQMQLTGGPRPYENSVCARRLMQYLYHQRQRPSESSIVYWRKFVTEYFS 324
Query: 102 PNAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYE 157
P AKK+WC+S Y + G A GV PQ D W C++C K GRGFEAT +VLPRL +IK+
Sbjct: 325 PRAKKRWCLSHYDNVGHSALGVSPQAATDEWQCDLCGSKSGRGFEATFDVLPRLNEIKFA 384
Query: 158 SGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSW 217
SG L+ELLY+ +P E + SG +VL+Y KA+QESV+E +RVVR+G LRI+FS +LKI SW
Sbjct: 385 SGVLDELLYLGVPSERRYGSGIMVLEYGKAVQESVYEHIRVVREGHLRIIFSQELKILSW 444
Query: 218 EFCARRHEELIPRRLLIPQVSQLGAAAQKYQAAT-QNASSNLSAPELQNNCNMFVASARQ 276
EFC RRHEEL+PRRL+ PQV+QL A+K Q+ Q+ S + +LQ N NM +A+ RQ
Sbjct: 445 EFCTRRHEELLPRRLVAPQVNQLLQVAEKCQSTIDQSGSDGIHQQDLQANSNMVMAAGRQ 504
Query: 277 LAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGA 336
LAK+LE +NDLG++KRYVRCLQISEVV+SMKD+ID+ R GP+E+L +P R
Sbjct: 505 LAKSLESHSLNDLGFSKRYVRCLQISEVVSSMKDMIDFCRDQKVGPIEALKSYPYRMKAG 564
Query: 337 SGFHSPSXXXXXXXXXXXXXXXXXXXNS-NSESSVQANAMQLATSNGVANVNNSLNPASA 395
P NS N +++ + + + +N + SL P SA
Sbjct: 565 K----PQMQEMEQLAAARGLPPDR--NSLNKLMALRNSGINIPMNN--MSGQGSL-PGSA 615
Query: 396 SSTASTIVG----LLHQNSMNSRQQNTV-------NNASSP-YGGSSVQMP 434
+ A + L+ QN +NS NT N ++SP Y G+S +P
Sbjct: 616 QAAAFALTNYQSMLMKQNHLNSDLNNTTIQQEPSRNRSASPSYQGTSPLLP 666
>TAIR|locus:2131804 [details] [associations]
symbol:SLK1 "SEUSS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0009790 "embryo
development" evidence=IMP] [GO:0048467 "gynoecium development"
evidence=IMP] [GO:0048481 "ovule development" evidence=IMP]
EMBL:CP002687 GO:GO:0009790 GO:GO:0048481 EMBL:AK226715
IPI:IPI00539727 RefSeq:NP_194282.2 UniGene:At.27857
EnsemblPlants:AT4G25520.1 GeneID:828657 KEGG:ath:AT4G25520
TAIR:At4g25520 InParanoid:Q0WVM7 OMA:AMNGSAQ PhylomeDB:Q0WVM7
ProtClustDB:CLSN2708531 Genevestigator:Q0WVM7 Uniprot:Q0WVM7
Length = 748
Score = 790 (283.2 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 156/296 (52%), Positives = 210/296 (70%)
Query: 43 QLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAP 102
QL Q QQ + +P YE G+CAR+L Y+Y Q RP +N I +WRKFVAEYF+P
Sbjct: 164 QLRQQLQQQGTQQIPPNVRP-YEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSP 222
Query: 103 NAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYES 158
AK++ C+S Y S G A G+FPQ D+W C++C K G+GFEAT +VL RL +IK+ S
Sbjct: 223 RAKQRLCLSQYESAGHHALGMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFAS 282
Query: 159 GTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWE 218
G ++ELLY+D PRE + +G ++L+Y KA+QE+V EQ RVVR+G LRI+FS DLKI SWE
Sbjct: 283 GIIDELLYLDHPRENRFPNGLMMLEYRKAVQETVHEQFRVVREGHLRIIFSQDLKILSWE 342
Query: 219 FCARRHEELIPRRLLIPQVSQLGAAAQKYQAA-TQNASSNLSAPELQNNCNMFVASARQL 277
FCARRHEEL+ RRL+ PQV+QL AQK Q+ +++ S +S +LQ+N NM + + RQL
Sbjct: 343 FCARRHEELLLRRLIAPQVNQLLQVAQKCQSTISESGSEGVSQQDLQSNSNMVLGAGRQL 402
Query: 278 AKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRT 333
AK +E+ +NDLGY KRY+R LQISEVV SMKDL++++ GP+E L + +T
Sbjct: 403 AKFMELQSLNDLGYPKRYIRTLQISEVVKSMKDLMNFTGEQKIGPIEGLKRLLEQT 458
Score = 74 (31.1 bits), Expect = 2.2e-84, Sum P(2) = 2.2e-84
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 370 VQANAMQLATSNGVANVNNSLNPASA-SSTASTIVGLLHQNSMNSRQQNTVNNASSPYG- 427
+ + + AT+N +N +N + A + +A L + SM RQ N +NN +S G
Sbjct: 525 ISSGTVSGATANNNSNNHNQIVGRGAMNGSAQAAAALTNYQSMLMRQ-NAMNNPNSNTGK 583
Query: 428 --GSSVQMPSPGSSNNIPQA 445
G S Q P+P +SN P +
Sbjct: 584 QEGFSSQNPTP-NSNQSPSS 602
Score = 60 (26.2 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 363 NSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIV-GLLHQNSMNSRQQNTVNN 421
N NS + Q ++ N N N S P+S+S +V G + +QQ T+N
Sbjct: 576 NPNSNTGKQEG---FSSQNPTPNSNQS--PSSSSQQRHNLVTGGFPNSPQMQQQQRTMNG 630
Query: 422 ASS--PYGGSSVQMPSPGSSNNIPQ 444
++ P Q+ SP S N P+
Sbjct: 631 PTNILPQNHPH-QLQSPHSHGNTPE 654
Score = 44 (20.5 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 363 NSNSESSVQANAMQLATSNGVANVNNSLNPAS 394
NSN+E + A+ ++ + NNS AS
Sbjct: 685 NSNAERNTTASTSNISGGGRAPSRNNSFKAAS 716
Score = 38 (18.4 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 405 LLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPG 437
+L +MN N NN G ++ P+ G
Sbjct: 489 VLTSGTMNGSTGNNTNNHHQIVGRGAMSGPAEG 521
>TAIR|locus:504955415 [details] [associations]
symbol:SLK3 "SEUSS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] EMBL:CP002687
IPI:IPI00546207 RefSeq:NP_680741.5 UniGene:At.20131
EnsemblPlants:AT4G25515.1 GeneID:828656 KEGG:ath:AT4G25515
OMA:MTENGAS PhylomeDB:F4JT98 Uniprot:F4JT98
Length = 685
Score = 817 (292.7 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 180/412 (43%), Positives = 255/412 (61%)
Query: 43 QLPQHFVQQQNLPLRSPAKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAP 102
QL Q +QQQ SP YE G+CAR+L Y+Y Q RP +N I +WRKFVAEYF+P
Sbjct: 136 QLRQQ-LQQQGTQQISPNVRPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSP 194
Query: 103 NAKKKWCVSMYGS-GRQATGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYES 158
AK++ C+S Y S G A G+FPQ D+W C++C K G+GFEAT +VL RL +IK+ S
Sbjct: 195 RAKQRLCLSQYESVGHHALGMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFAS 254
Query: 159 GTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWE 218
G ++ELLY+D PRE + +G ++L+Y KA+QE+V EQ RVVR+G LRI+FSPDLKI SWE
Sbjct: 255 GIIDELLYLDHPRENRFPNGLMMLEYRKAVQETVHEQFRVVREGHLRIIFSPDLKILSWE 314
Query: 219 FCARRHEELIPRRLLIPQVSQLGAAAQKYQAA-TQNASSNLSAPELQNNCNMFVASARQL 277
FCARRHEEL+ RRL+ PQV+QL AQK Q+ +++ S +S ++Q+N NM + + RQL
Sbjct: 315 FCARRHEELLLRRLIAPQVNQLLQVAQKCQSTISESGSQGVSQQDIQSNSNMVLGAGRQL 374
Query: 278 AKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGAS 337
AK +E+ +NDLGY KRY+R LQISEVV SMKDL++++ GP+E L + +T+
Sbjct: 375 AKFMELQSLNDLGYPKRYIRTLQISEVVKSMKDLMNFTGEHKVGPLEGLKQLLEQTATVK 434
Query: 338 GFHSPSXXXXXXXXXXXXXXXXXXXNSNSESSVQANAMQLATSNGVANVNNSLNPASA-S 396
+ ++ ++ + M +T+N +N ++ + A +
Sbjct: 435 -----LQRQKMQEMEQFGNSGAMSGPAQAQMTLSSGTMSGSTANNNSNNHHQIVGRGAMN 489
Query: 397 STASTIVGLLHQNSMNSRQQNTVNNASSPYG---GSSVQMPSPGSSNNIPQA 445
+ L + SM RQ N +NN +S G G S Q P+ +SN P +
Sbjct: 490 GSPQATAALTNYQSMLIRQ-NAMNNQNSNTGNQEGFSSQNPTL-NSNQSPSS 539
Score = 44 (20.5 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 410 SMNSRQQNTVNNASSPYGG----SSVQMPSPGSSNNIP 443
S N+ ++NT + S+ GG S + S+NN+P
Sbjct: 621 SNNNTERNTTASTSNISGGGRVPSRINSFKASSNNNLP 658
>POMBASE|SPBC30B4.03c [details] [associations]
symbol:adn1 "adhesion defective protein, predicted
transcriptional regulator (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003712 "transcription cofactor
activity" evidence=ISM] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISM] [GO:0010811 "positive regulation of cell-substrate
adhesion" evidence=IMP] [GO:0071276 "cellular response to cadmium
ion" evidence=IMP] [GO:0071585 "detoxification of cadmium ion"
evidence=IMP] PomBase:SPBC30B4.03c GO:GO:0005634 GO:GO:0006355
EMBL:CU329671 GO:GO:0071276 GO:GO:0071585 GO:GO:0007155
GO:GO:0006351 PIR:T40169 RefSeq:NP_595528.1
EnsemblFungi:SPBC30B4.03c.1 GeneID:2540335 KEGG:spo:SPBC30B4.03c
eggNOG:NOG147467 OrthoDB:EOG4Q5CZK NextBio:20801464 GO:GO:0003712
GO:GO:0010811 Uniprot:O74364
Length = 391
Score = 135 (52.6 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 55/214 (25%), Positives = 103/214 (48%)
Query: 121 GVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYV-DMPREYQNASGQ 179
G F ++ + + N++P + FE + LPR + Y G L+++ ++ +E+ +
Sbjct: 58 GTFRYNIDYKDSPNQEP-KLFELSYAALPRFLYLSY-CGKLKKMSFLLGNTKEFAIPNNG 115
Query: 180 IVLDYAKA-IQESVFEQLRVVRDGQLRIVF--SPDLKICSWEFCARRHEELIPRRLLIPQ 236
++ ++A I ++V+ G LR F +P LK+ S EF A H E + R L+
Sbjct: 116 YFVESSRASILYQYQGGVQVIVSGHLRAHFFRAPLLKLDSLEFSAVGHSEYLLRELMT-N 174
Query: 237 VSQLGAAAQKYQAATQNASSNLSAPELQN-NCNMFVASARQLAKALEVPLVNDLGYTKRY 295
S + ++ Q Q+ P ++ N N S+ L + P VN+ G
Sbjct: 175 ASLALSQSRPPQNQIQHDGVKSEDPSSESVNIN----SSSSLLP--DSP-VNEYGLEPHI 227
Query: 296 VRCLQISEVVNSMKDLIDYSRVTGTGPMESLAKF 329
+R ++I+E ++ M+DLI ++ +GP +L KF
Sbjct: 228 MRFMEITETISGMRDLIAFTLAQRSGPTSALHKF 261
Score = 41 (19.5 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 476 HMSSASSPANISVQQPALSG-EADPRALSGD 505
H S+ +NI PA SG PR +GD
Sbjct: 269 HQMQKSTSSNIPYANPAPSGFNGSPR--NGD 297
>DICTYBASE|DDB_G0271670 [details] [associations]
symbol:DDB_G0271670 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
dictyBase:DDB_G0271670 GO:GO:0005576 EMBL:AAFI02000006
ProtClustDB:CLSZ2431310 RefSeq:XP_645495.1
ProteinModelPortal:Q75JC9 EnsemblProtists:DDB0168484 GeneID:8618123
KEGG:ddi:DDB_G0271670 OMA:EITNEEP Uniprot:Q75JC9
Length = 374
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 37/212 (17%), Positives = 87/212 (41%)
Query: 303 EVVNSMKDLIDYSRVTGTGPMESLAKFPRRTSGASGFHSPSXXXXXXXXXXXXXXXXXXX 362
E N M ++ D + +++ + +S +S S S
Sbjct: 43 EKTNKMAEVGDLGVASFLNILDTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 102
Query: 363 NSNSESSVQANAMQLATSNGVANVNNSLNPASASSTASTIVGLLHQNSMNSRQQNTVNNA 422
+S+S SS +++ ++S+ ++ ++S + +S+SS++S+ +S +S ++ +++
Sbjct: 103 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 162
Query: 423 SSPYGGSSVQMPSPGSSNNIPQAXXXXXXXXXXXXXXXXXXXXXXXXALTAANHMSSASS 482
SS SS S SS++ + + ++++ SS+SS
Sbjct: 163 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 222
Query: 483 PANISVQQPALSGEADPRALSGDADPSDSQSA 514
++ S + S + + S + S S S+
Sbjct: 223 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 254
>UNIPROTKB|Q1EQW7 [details] [associations]
symbol:ldb2 "LIM domain-binding protein 2" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0030274 "LIM domain binding"
evidence=ISS] InterPro:IPR002691 GO:GO:0005634 GO:GO:0003712
GO:GO:0030274 HOVERGEN:HBG000135 PANTHER:PTHR10378 CTD:9079
EMBL:AB250388 EMBL:AB250389 RefSeq:NP_001089184.1 UniGene:Xl.57032
ProteinModelPortal:Q1EQW7 SMR:Q1EQW7 GeneID:734228 KEGG:xla:734228
Xenbase:XB-GENE-490283 Uniprot:Q1EQW7
Length = 398
Score = 94 (38.1 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 147 VLPRLFKIKYESGTLEELLYV--DMPREYQNASGQIVLDYAKAIQESVFEQL-RVVRDGQ 203
++PR F +E G + +L Y+ Y N+S + D + + +V +G+
Sbjct: 84 LIPRYFSTVFEGG-VTDLYYILKHSKESYHNSSITVDCDQCTMVTQHGKPMFTKVCTEGR 142
Query: 204 LRIVFSPD--LKICSWEFCARRHEELIPRRLL 233
L + F+ D ++I +W F R++ EL+PR +L
Sbjct: 143 LILEFTFDDLMRIKTWHFTIRQYRELLPRSIL 174
Score = 56 (24.8 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 392 PASASSTASTIVGLLHQNSMNSRQQNTVNNASSPYGGSSVQMPSPGSSNNIP 443
PA + +T ++ N+ N NNA+S Y V S SN +P
Sbjct: 246 PAEPTRQTTTKRRKRKNSTNNASNSNAGNNATSAYNRKKVPAASLNLSNQVP 297
Score = 47 (21.6 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 58 SPAKPVYE---PGMCARRLTHYMYQQ--QHRPEDNNIEFWRKFVAEYFAPNA 104
SP P Y P M Y + Q R ED++ +W F E+F +A
Sbjct: 12 SPFGPFYRRHAPYMVQPEYRIYEMNKRLQTRTEDSDNLWWDAFATEFFEDDA 63
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.127 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 658 499 0.00084 119 3 11 23 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 621 (66 KB)
Total size of DFA: 288 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.73u 0.12s 43.85t Elapsed: 00:00:02
Total cpu time: 43.73u 0.12s 43.85t Elapsed: 00:00:02
Start: Mon May 20 23:12:08 2013 End: Mon May 20 23:12:10 2013