Query 006162
Match_columns 658
No_of_seqs 279 out of 1427
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 17:39:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1a58_A Cyclophilin; isomerase, 100.0 1.7E-50 5.8E-55 394.6 21.6 176 1-176 1-177 (177)
2 2wfi_A Peptidyl-prolyl CIS-tra 100.0 4.1E-50 1.4E-54 392.5 22.3 175 1-175 3-179 (179)
3 2he9_A NK-tumor recognition pr 100.0 1.1E-49 3.9E-54 393.2 22.2 177 1-177 14-191 (192)
4 2igv_A Peptidyl-prolyl CIS-tra 100.0 3.3E-49 1.1E-53 384.2 21.4 171 5-176 2-172 (173)
5 2poy_A Peptidyl-prolyl CIS-tra 100.0 8.9E-49 3E-53 385.0 20.9 172 2-174 15-186 (186)
6 1qng_A Peptidyl-prolyl CIS-tra 100.0 9.1E-49 3.1E-53 380.1 20.2 169 5-175 2-170 (170)
7 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.3E-48 4.5E-53 381.2 19.7 171 2-175 6-177 (177)
8 2z6w_A Peptidyl-prolyl CIS-tra 100.0 4.3E-48 1.5E-52 373.7 21.4 163 5-176 2-165 (165)
9 2r99_A Peptidyl-prolyl CIS-tra 100.0 4.4E-48 1.5E-52 376.3 21.5 164 4-176 9-173 (173)
10 3pmp_A Cyclophilin A; peptidyl 100.0 4.5E-48 1.5E-52 373.2 21.1 162 5-175 1-163 (164)
11 2cmt_A Peptidyl-prolyl CIS-tra 100.0 4.8E-48 1.6E-52 375.6 21.1 164 4-176 8-172 (172)
12 1z81_A Cyclophilin; structural 100.0 7.4E-48 2.5E-52 388.8 20.2 172 1-175 54-229 (229)
13 3k2c_A Peptidyl-prolyl CIS-tra 100.0 2.6E-47 8.8E-52 376.7 21.7 167 1-176 22-191 (193)
14 3rdd_A Peptidyl-prolyl CIS-tra 100.0 2.3E-47 7.9E-52 374.5 20.7 164 4-176 20-184 (184)
15 2haq_A Cyclophilin; rotamase, 100.0 1.9E-47 6.5E-52 371.3 19.9 162 4-175 9-172 (172)
16 3ich_A Peptidyl-prolyl CIS-tra 100.0 3E-47 1E-51 374.8 19.2 166 6-180 15-184 (188)
17 4fru_A Cyclophilin B, peptidyl 100.0 1.2E-46 4E-51 369.9 19.4 164 6-177 12-176 (185)
18 1ihg_A Cyclophilin 40; ppiase 100.0 1.5E-45 5.3E-50 394.2 21.3 173 6-178 15-187 (370)
19 2ose_A Probable peptidyl-proly 100.0 8.2E-46 2.8E-50 375.7 18.1 181 3-185 11-216 (234)
20 2c3b_A Ppiase, cyclophilin; is 100.0 4.7E-46 1.6E-50 361.7 12.3 159 8-175 4-172 (172)
21 1zkc_A Peptidyl-prolyl CIS-tra 100.0 9.6E-44 3.3E-48 351.8 18.6 164 4-184 17-183 (197)
22 3bo7_A Peptidyl-prolyl CIS-tra 100.0 6.1E-44 2.1E-48 354.8 17.3 164 4-184 4-181 (201)
23 2poe_A Cyclophilin-like protei 100.0 1.7E-43 6E-48 347.2 18.2 161 5-182 15-181 (185)
24 2ok3_A Peptidyl-prolyl CIS-tra 100.0 3.5E-43 1.2E-47 338.2 17.5 156 8-180 2-160 (161)
25 2x7k_A Peptidyl-prolyl CIS-tra 100.0 3.9E-43 1.3E-47 339.4 17.5 156 3-175 8-165 (166)
26 2b71_A Cyclophilin-like protei 100.0 7.7E-43 2.6E-47 345.2 17.7 157 5-178 37-195 (196)
27 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.2E-42 4E-47 342.8 18.6 162 5-175 22-191 (191)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 9.7E-43 3.3E-47 345.9 16.9 160 3-179 8-169 (203)
29 2fu0_A Cyclophilin, putative; 100.0 1.3E-42 4.4E-47 333.9 17.1 153 6-175 5-159 (160)
30 2a2n_A Peptidylprolyl isomeras 100.0 3.4E-42 1.2E-46 335.6 17.9 152 6-174 21-175 (176)
31 2hq6_A Serologically defined c 100.0 4.2E-42 1.4E-46 337.3 15.9 160 3-180 21-184 (185)
32 3bkp_A Cyclophilin; malaria, i 100.0 1.9E-41 6.6E-46 343.1 16.0 162 4-183 19-200 (232)
33 1v9t_A Cyclophilin B; beta bar 100.0 3E-41 1E-45 326.2 15.4 153 4-175 2-165 (166)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 2.5E-40 8.5E-45 320.0 14.6 152 5-175 2-167 (167)
35 1lop_A Cyclophilin A; rotamase 100.0 2.1E-40 7.2E-45 319.7 13.3 148 8-175 1-163 (164)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.5E-35 1.2E-39 313.6 8.4 149 5-171 169-355 (369)
37 2nnz_A Hypothetical protein; b 96.8 0.0012 4.2E-08 62.7 5.5 105 11-154 32-143 (153)
38 3kop_A Uncharacterized protein 96.8 0.0074 2.5E-07 58.4 10.5 118 10-155 23-167 (188)
39 1zx8_A Hypothetical protein TM 93.1 0.22 7.5E-06 46.3 7.6 105 9-154 13-124 (136)
40 3q6c_A Probable receptor YHHM; 36.2 27 0.00093 29.6 3.4 46 8-70 36-81 (83)
41 2l0c_A Putative membrane prote 22.0 41 0.0014 29.3 2.1 45 8-70 39-84 (97)
No 1
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.7e-50 Score=394.56 Aligned_cols=176 Identities=59% Similarity=1.010 Sum_probs=167.1
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCC
Q 006162 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSK 80 (658)
Q Consensus 1 m~~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~ 80 (658)
|.++.||+|||||+|+++++|+|+||||+++||+||+||++||++++|.+...++.+||+|+.||||+++|||||||+..
T Consensus 1 ~~~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~ 80 (177)
T 1a58_A 1 MSKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTK 80 (177)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSS
T ss_pred CCCCCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccC
Confidence 78889999999999999999999999999999999999999999987765444567799999999999999999999988
Q ss_pred CCCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC-
Q 006162 81 GNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG- 159 (658)
Q Consensus 81 ~~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~- 159 (658)
+++.++++||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.++++
T Consensus 81 ~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~ 160 (177)
T 1a58_A 81 GDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNS 160 (177)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccCCeEeceeeecc
Q 006162 160 DGKPAQPVKIIDCGEFS 176 (658)
Q Consensus 160 ~gkP~~~I~I~~cg~l~ 176 (658)
+++|+.+|+|.+||+|.
T Consensus 161 ~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 161 KNRPLADVVILNCGELV 177 (177)
T ss_dssp TSCBSSCEEEEEEEEEC
T ss_pred CCcCCCCeEEEEeEEEC
Confidence 48999999999999973
No 2
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=4.1e-50 Score=392.54 Aligned_cols=175 Identities=59% Similarity=1.039 Sum_probs=165.2
Q ss_pred CCCC-CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCC
Q 006162 1 MSEK-KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFS 79 (658)
Q Consensus 1 m~~~-~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~ 79 (658)
|.++ .||+|||||+|+++++|+|+||||+++||+||+||++||+|++|.+...++.+||+|+.||||+++|||||||+.
T Consensus 3 ~~~~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~ 82 (179)
T 2wfi_A 3 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFS 82 (179)
T ss_dssp -----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTT
T ss_pred CCcCCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEccccc
Confidence 5566 699999999999999999999999999999999999999999888777788999999999999999999999998
Q ss_pred CCCCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC
Q 006162 80 KGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG 159 (658)
Q Consensus 80 ~~~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~ 159 (658)
.+++.++++||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.++++
T Consensus 83 ~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~ 162 (179)
T 2wfi_A 83 EGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTD 162 (179)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBC
T ss_pred CCCCCCCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -CCCccCCeEeceeeec
Q 006162 160 -DGKPAQPVKIIDCGEF 175 (658)
Q Consensus 160 -~gkP~~~I~I~~cg~l 175 (658)
+++|+.+|+|.+||+|
T Consensus 163 ~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 163 AASKPFAEVRILSCGEL 179 (179)
T ss_dssp TTSCBSSCEEEEEEEEC
T ss_pred CCCCCCCCeEEEeCeeC
Confidence 5899999999999986
No 3
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=393.15 Aligned_cols=177 Identities=54% Similarity=0.995 Sum_probs=165.5
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCC
Q 006162 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSK 80 (658)
Q Consensus 1 m~~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~ 80 (658)
|.+..||+|||||+|+++++|+|+||||+++||+||+||++||+|++|++...++.+||+|+.|||||++|||||||+..
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred ccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccC
Confidence 45678999999999999999999999999999999999999999998887777889999999999999999999999988
Q ss_pred CCCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC-
Q 006162 81 GNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG- 159 (658)
Q Consensus 81 ~~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~- 159 (658)
+++.++++|||..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.++++
T Consensus 94 ~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 94 GNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDA 173 (192)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccCCeEeceeeeccc
Q 006162 160 DGKPAQPVKIIDCGEFSE 177 (658)
Q Consensus 160 ~gkP~~~I~I~~cg~l~~ 177 (658)
+++|+.+|+|.+|++|..
T Consensus 174 ~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 174 ASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp TSCBSSCEEEEEEEECC-
T ss_pred CCCCcCCeEEEEeEEEcc
Confidence 589999999999999853
No 4
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=3.3e-49 Score=384.18 Aligned_cols=171 Identities=64% Similarity=1.128 Sum_probs=162.5
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~ 84 (658)
.||+|||||+|+++++|+|+||||+++||+||+||++||++++|.+. .++.+||+|+.||||+++|||||||+..+++.
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGK-SGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCc-cCccceECCCEEEEEECCCEEEcCCCCCCCCC
Confidence 48999999999999999999999999999999999999998766542 45778999999999999999999999888999
Q ss_pred CCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCCcc
Q 006162 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPA 164 (658)
Q Consensus 85 gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gkP~ 164 (658)
++.+||+..|++|++.|+|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++.+++|+
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 160 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPV 160 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeceeeecc
Q 006162 165 QPVKIIDCGEFS 176 (658)
Q Consensus 165 ~~I~I~~cg~l~ 176 (658)
.+|+|.+||+|.
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEeEEEc
Confidence 999999999974
No 5
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=8.9e-49 Score=385.00 Aligned_cols=172 Identities=62% Similarity=1.041 Sum_probs=160.6
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCC
Q 006162 2 SEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKG 81 (658)
Q Consensus 2 ~~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~ 81 (658)
....||+|||||+|+++++|+|+||||+++||+||+||++||++++|.+. .++.++|+|+.||||+++|||||||+..+
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~-~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQ-SGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred ccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccc-cCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 34579999999999999999999999999999999999999998766643 46778899999999999999999999888
Q ss_pred CCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCC
Q 006162 82 NGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDG 161 (658)
Q Consensus 82 ~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~g 161 (658)
++.++.+||+..|++|++.|+|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++.++
T Consensus 94 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~ 173 (186)
T 2poy_A 94 DGTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNG 173 (186)
T ss_dssp SSSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTS
T ss_pred CCCCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCeEeceeee
Q 006162 162 KPAQPVKIIDCGE 174 (658)
Q Consensus 162 kP~~~I~I~~cg~ 174 (658)
+|+.+|+|.+||+
T Consensus 174 ~P~~~v~I~~cG~ 186 (186)
T 2poy_A 174 KPTKSVCITASGV 186 (186)
T ss_dssp CCSSCEEEEEEEC
T ss_pred CCCCCEEEEeCCC
Confidence 9999999999985
No 6
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=9.1e-49 Score=380.11 Aligned_cols=169 Identities=60% Similarity=1.045 Sum_probs=159.4
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~ 84 (658)
.||+|||||+|+++++|+|+||||+++||+||+||++||++. |.+ ..++.++|+|+.||||+++|||||||+..+++.
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g-~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIG-SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EEC-TTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcC-ccCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 589999999999999999999999999999999999999864 332 235667799999999999999999999888999
Q ss_pred CCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCCcc
Q 006162 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPA 164 (658)
Q Consensus 85 gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gkP~ 164 (658)
++++||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++.+++|+
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 159 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVK 159 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCS
T ss_pred CCccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred CCeEeceeeec
Q 006162 165 QPVKIIDCGEF 175 (658)
Q Consensus 165 ~~I~I~~cg~l 175 (658)
.+|+|.+||+|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCeEEEeceeC
Confidence 99999999986
No 7
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.3e-48 Score=381.21 Aligned_cols=171 Identities=63% Similarity=1.057 Sum_probs=161.1
Q ss_pred CCCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCC
Q 006162 2 SEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKG 81 (658)
Q Consensus 2 ~~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~ 81 (658)
.+..||+|||||+++++++|+|+||||+++||+||+||++||+++.|. .++.++|+|+.||||+++|||||||+..+
T Consensus 6 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~---~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 82 (177)
T 1mzw_A 6 SSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK---DGVPIGYKGSTFHRVIKDFMIQGGDFVNG 82 (177)
T ss_dssp CCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE---TTEECSSTTCBCCEEETTTEEEECCTTTS
T ss_pred cCCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC---cCccceECCCEEEEEECCCEEEcCCcccC
Confidence 456799999999999999999999999999999999999999987543 24566799999999999999999999888
Q ss_pred CCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC-C
Q 006162 82 NGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-D 160 (658)
Q Consensus 82 ~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~-~ 160 (658)
++.++++|||..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.++++ +
T Consensus 83 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~ 162 (177)
T 1mzw_A 83 DGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPN 162 (177)
T ss_dssp SSCCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGG
T ss_pred CCCCCCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999996 6
Q ss_pred CCccCCeEeceeeec
Q 006162 161 GKPAQPVKIIDCGEF 175 (658)
Q Consensus 161 gkP~~~I~I~~cg~l 175 (658)
++|+.+|+|.+||+|
T Consensus 163 ~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 163 NKPKLPVVISQCGEM 177 (177)
T ss_dssp GCBSSCEEEEEEEEC
T ss_pred CCCCCCEEEEeceeC
Confidence 899999999999986
No 8
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=4.3e-48 Score=373.73 Aligned_cols=163 Identities=62% Similarity=1.086 Sum_probs=156.3
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGNG 83 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~~g 83 (658)
.||+|||||+++++++|+|+||||+++||+||+||++||+|++ +| |+|+.||||+++|||||||+..+++
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~---------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g 72 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEK---------GFGYKGSTFHRVIPSFMCQAGDFTNHNG 72 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT---------SCCSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC---------CccCcCCEEEEEECCCEEEeCCccCCCC
Confidence 3899999999999999999999999999999999999998764 37 9999999999999999999988899
Q ss_pred CCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCCc
Q 006162 84 TGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKP 163 (658)
Q Consensus 84 ~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gkP 163 (658)
.++.+||+..|++|++.|+|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++.+++|
T Consensus 73 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P 152 (165)
T 2z6w_A 73 TGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRT 152 (165)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCC
T ss_pred CCCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred cCCeEeceeeecc
Q 006162 164 AQPVKIIDCGEFS 176 (658)
Q Consensus 164 ~~~I~I~~cg~l~ 176 (658)
+.+|+|.+||+|+
T Consensus 153 ~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 153 SKKIVITDCGQLS 165 (165)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCcEEEEEeEEEC
Confidence 9999999999973
No 9
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=4.4e-48 Score=376.26 Aligned_cols=164 Identities=61% Similarity=1.058 Sum_probs=156.8
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCCC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~~ 82 (658)
..||+|||||+++++++|+|+||||+++||+||+||++||+|++| | |+|+.||||+++|||||||+..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKG---------FGFKGSSFHRIIPQFMCQGGDFTNHN 79 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCC---------ceecCCEEEEeeCCCEEEeCCcCCCC
Confidence 468999999999999999999999999999999999999987543 5 999999999999999999998889
Q ss_pred CCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCC
Q 006162 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGK 162 (658)
Q Consensus 83 g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gk 162 (658)
+.++.+||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++++++
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~ 159 (173)
T 2r99_A 80 GTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGK 159 (173)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCC
T ss_pred CCCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEeceeeecc
Q 006162 163 PAQPVKIIDCGEFS 176 (658)
Q Consensus 163 P~~~I~I~~cg~l~ 176 (658)
|+.+|+|.+||+|.
T Consensus 160 P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 160 PKQKVIIADCGEYV 173 (173)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CCCCeEEEEeeeEC
Confidence 99999999999974
No 10
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=4.5e-48 Score=373.22 Aligned_cols=162 Identities=57% Similarity=1.012 Sum_probs=156.7
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGNG 83 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~~g 83 (658)
.||+|||||+|+++++|+|+||||+++||+||+||++||+|+.| | |+|+.||||+++|||||||+..+++
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~g 71 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG---------FGYKDSIFHRVIPQFMLQGGDFTRHNG 71 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC---------CcccCCEEEEEECCCeEEeCCCCCCCC
Confidence 38999999999999999999999999999999999999987643 6 9999999999999999999988999
Q ss_pred CCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCCc
Q 006162 84 TGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKP 163 (658)
Q Consensus 84 ~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gkP 163 (658)
.++.++|+..|++|++.++|+.+|+|+||+.++|++++||||||.++++||++|+|||+||+|||||++|+.+++++++|
T Consensus 72 ~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P 151 (164)
T 3pmp_A 72 TGGKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKT 151 (164)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCC
T ss_pred CCCcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEeceeeec
Q 006162 164 AQPVKIIDCGEF 175 (658)
Q Consensus 164 ~~~I~I~~cg~l 175 (658)
+.+|+|.+||+|
T Consensus 152 ~~~v~I~~cg~l 163 (164)
T 3pmp_A 152 NATIKITDCGTV 163 (164)
T ss_dssp SSCEEEEEEEEC
T ss_pred ccCEEEEeCeEE
Confidence 999999999987
No 11
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=4.8e-48 Score=375.63 Aligned_cols=164 Identities=61% Similarity=1.030 Sum_probs=156.7
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCCC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~~ 82 (658)
+.||+|||||+++++++|+|+||||+++||+||+||++||++++| | |+|+.||||+++|||||||+..++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 78 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG---------FGYHNCCFHRVIPQFMCQGGDFVKGD 78 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC---------ceECCCEEEEEECCCEEEcCCccCCC
Confidence 468999999999999999999999999999999999999987533 6 999999999999999999998889
Q ss_pred CCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCC
Q 006162 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGK 162 (658)
Q Consensus 83 g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gk 162 (658)
+.++.+||+..|++|++.|+|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++++++
T Consensus 79 G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~ 158 (172)
T 2cmt_A 79 GTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGK 158 (172)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCC
T ss_pred CCCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEeceeeecc
Q 006162 163 PAQPVKIIDCGEFS 176 (658)
Q Consensus 163 P~~~I~I~~cg~l~ 176 (658)
|+.+|+|.+||+|.
T Consensus 159 P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 159 VKEPVIISRCGELI 172 (172)
T ss_dssp CSSCEEEEEEEEEC
T ss_pred CCCCEEEEEeEeEC
Confidence 99999999999973
No 12
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.4e-48 Score=388.80 Aligned_cols=172 Identities=52% Similarity=0.951 Sum_probs=162.9
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCC
Q 006162 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSK 80 (658)
Q Consensus 1 m~~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~ 80 (658)
|.++.||+|||||+|+++++|+|+||||+++||+||+||++||+++.+.+ ++.+||+|+.|||||++|||||||+..
T Consensus 54 ~~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~---g~~~~Y~gt~FHRVi~~FmiQgGD~~~ 130 (229)
T 1z81_A 54 LTNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN---NLPVGYKNTIFHRVIKEFMIQGGDFIN 130 (229)
T ss_dssp SSSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS---SSBCSSTTEECCEEETTTEEEECCTTT
T ss_pred ccCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc---CCCceECCCEEEEEeCCCEEEcCCCcC
Confidence 35668999999999999999999999999999999999999999886543 466799999999999999999999988
Q ss_pred CCCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEE--cCHHHHHHHHhcCC
Q 006162 81 GNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVV--KGLNIVKKIEQVGT 158 (658)
Q Consensus 81 ~~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVI--eGmdVLdkI~~v~t 158 (658)
+++.++++||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|||||+|| +|||||++|+.+++
T Consensus 131 g~G~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t 210 (229)
T 1z81_A 131 HNGSGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSV 210 (229)
T ss_dssp SSSCCCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCB
T ss_pred CCCCCCCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CC--CCccCCeEeceeeec
Q 006162 159 GD--GKPAQPVKIIDCGEF 175 (658)
Q Consensus 159 ~~--gkP~~~I~I~~cg~l 175 (658)
++ ++|+.+|+|.+||+|
T Consensus 211 ~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 211 TPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp CTTTCCBSSCEEEEEEEEC
T ss_pred CCCCCCCCCCeEEEeCeeC
Confidence 85 899999999999986
No 13
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=2.6e-47 Score=376.70 Aligned_cols=167 Identities=54% Similarity=0.951 Sum_probs=159.0
Q ss_pred CCCCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCC
Q 006162 1 MSEKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFS 79 (658)
Q Consensus 1 m~~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~ 79 (658)
|+...||+|||||+++++++|+|+||||+++||+||+||++||+++.| | |+|+.||||+++|||||||+.
T Consensus 22 ~~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~ 92 (193)
T 3k2c_A 22 MAKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKG---------EGYKGSTFHRIIPGFMVQGGDYT 92 (193)
T ss_dssp CC--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTT---------SSSTTCBEEEEETTTEEEECCTT
T ss_pred ccccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccC---------CcccCCEEEEEeCCCEEEeCCCC
Confidence 566789999999999999999999999999999999999999987644 5 999999999999999999998
Q ss_pred CCCCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC
Q 006162 80 KGNGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG 159 (658)
Q Consensus 80 ~~~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~ 159 (658)
.+++.++.++|+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.++++
T Consensus 93 ~~~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~ 172 (193)
T 3k2c_A 93 AHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSE 172 (193)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCT
T ss_pred CCCCcCCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcc--CCeEeceeeecc
Q 006162 160 DGKPA--QPVKIIDCGEFS 176 (658)
Q Consensus 160 ~gkP~--~~I~I~~cg~l~ 176 (658)
+++|. .+|+|.+||+|.
T Consensus 173 ~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 173 SGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp TCCCCTTCCEEEEEEEECC
T ss_pred CCcCccCccEEEEEceEeC
Confidence 99999 999999999985
No 14
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=2.3e-47 Score=374.53 Aligned_cols=164 Identities=63% Similarity=1.107 Sum_probs=157.2
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCCC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~~ 82 (658)
..||+|||||+|+++++|+|+||||+++||+||+||++||+++.| | |+|+.||||+++|||||||+..++
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 90 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKG---------FGYKGSCFHRIIPGFMCQGGDFTRHN 90 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS---------CSSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcC---------cccCCCEEEEccCCcEEEeCCCCCCC
Confidence 368999999999999999999999999999999999999987644 4 999999999999999999998899
Q ss_pred CCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCC
Q 006162 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGK 162 (658)
Q Consensus 83 g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gk 162 (658)
+.++.++|+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++.+++
T Consensus 91 g~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~ 170 (184)
T 3rdd_A 91 GTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGK 170 (184)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSC
T ss_pred CCCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEeceeeecc
Q 006162 163 PAQPVKIIDCGEFS 176 (658)
Q Consensus 163 P~~~I~I~~cg~l~ 176 (658)
|+.+|+|.+||+|.
T Consensus 171 P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 171 TSKKITIADCGQLE 184 (184)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CcCCeEEEeCeEEC
Confidence 99999999999973
No 15
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.9e-47 Score=371.28 Aligned_cols=162 Identities=55% Similarity=0.966 Sum_probs=154.9
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCCC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGN 82 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~~ 82 (658)
+.+|+|||||+|+++++|+|+||||+++||+||+||++||+|..| | |+|+.||||+++|||||||+..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG---------FGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEECCCEEecCCccCCC
Confidence 468999999999999999999999999999999999999987643 7 999999999999999999988889
Q ss_pred CCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCC-C
Q 006162 83 GTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-G 161 (658)
Q Consensus 83 g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~-g 161 (658)
+.++.+|||..|++|++.|+|. +|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.+++++ +
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 9999999999999999999999 9999999999999999999999999999999999999999999999999999985 5
Q ss_pred CccCCeEeceeeec
Q 006162 162 KPAQPVKIIDCGEF 175 (658)
Q Consensus 162 kP~~~I~I~~cg~l 175 (658)
+|+.+|+|.+||+|
T Consensus 159 ~P~~~v~I~~~g~l 172 (172)
T 2haq_A 159 RPVKPVKIVASGEL 172 (172)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred cCCCCeEEEEeEEC
Confidence 99999999999986
No 16
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3e-47 Score=374.79 Aligned_cols=166 Identities=55% Similarity=0.969 Sum_probs=157.0
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCCCCC
Q 006162 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKGNGT 84 (658)
Q Consensus 6 nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~~g~ 84 (658)
+++|||||+++++++|+|+||||+++||+||+||++||+|++| | |+|+.||||+++|||||||+..+++.
T Consensus 15 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 85 (188)
T 3ich_A 15 TVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG---------FGYKNSKFHRVIKDFMIQGGDFTRGDGT 85 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC---------ccccCCEEEEEECCCEEEcCCccCCCCC
Confidence 6899999999999999999999999999999999999987543 6 99999999999999999998889999
Q ss_pred CCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCC-CCc
Q 006162 85 GGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-GKP 163 (658)
Q Consensus 85 gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~-gkP 163 (658)
++.+|||..|++|++.|+|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+||+||++|+.+++++ ++|
T Consensus 86 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P 165 (188)
T 3ich_A 86 GGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKP 165 (188)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985 599
Q ss_pred cCCeEeceeeec--ccccc
Q 006162 164 AQPVKIIDCGEF--SESKI 180 (658)
Q Consensus 164 ~~~I~I~~cg~l--~~~~~ 180 (658)
+.+|+|.+|++| .++|.
T Consensus 166 ~~~v~I~~~~~l~~~~Pf~ 184 (188)
T 3ich_A 166 LKDVIIADCGKIEVEKPFA 184 (188)
T ss_dssp SSCEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEeEEEecCCCCC
Confidence 999999999998 45543
No 17
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.2e-46 Score=369.90 Aligned_cols=164 Identities=56% Similarity=0.991 Sum_probs=156.5
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCC
Q 006162 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTG 85 (658)
Q Consensus 6 nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~g 85 (658)
+|+|||||+|+++++|+|+||||+++||+||+||++||++++| .||+|+.||||+++|||||||+..+++.+
T Consensus 12 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g--------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 83 (185)
T 4fru_A 12 TVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKG--------FGYKDSKFHRVIKDFMIQGGDFTRGDGTG 83 (185)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTS--------CCSTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCC--------CeEcCCEEEEeeCCCeEEECCCCCCCCCC
Confidence 7899999999999999999999999999999999999987543 26999999999999999999998899999
Q ss_pred CccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCcc
Q 006162 86 GESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKPA 164 (658)
Q Consensus 86 g~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~-~gkP~ 164 (658)
+.++|+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+|||||++|+.++++ +++|+
T Consensus 84 g~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~ 163 (185)
T 4fru_A 84 GKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPL 163 (185)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 58999
Q ss_pred CCeEeceeeeccc
Q 006162 165 QPVKIIDCGEFSE 177 (658)
Q Consensus 165 ~~I~I~~cg~l~~ 177 (658)
.+|+|.+||+|..
T Consensus 164 ~~v~I~~~g~l~~ 176 (185)
T 4fru_A 164 KDVTIADCGKIEV 176 (185)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CCEEEEEceEEec
Confidence 9999999999853
No 18
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1.5e-45 Score=394.21 Aligned_cols=173 Identities=67% Similarity=1.104 Sum_probs=166.0
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCC
Q 006162 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTG 85 (658)
Q Consensus 6 nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~g 85 (658)
||+|||||+|||+++|+|+||||+++||+||+||+.||++++|++...++.+||+||.|||||++|||||||+..++|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999888765567789999999999999999999998899999
Q ss_pred CccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCCccC
Q 006162 86 GESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQ 165 (658)
Q Consensus 86 g~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gkP~~ 165 (658)
+++|||..|++|++.++|+.+|+|+||+.|+|++||||||||.+++|||++|||||+||+||+||++|+.++++.++|..
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred CeEeceeeecccc
Q 006162 166 PVKIIDCGEFSES 178 (658)
Q Consensus 166 ~I~I~~cg~l~~~ 178 (658)
+|+|..|+++.+.
T Consensus 175 ~v~I~~~g~l~~~ 187 (370)
T 1ihg_A 175 LCVIAECGELKEG 187 (370)
T ss_dssp CEEEEEEEEECTT
T ss_pred eEEEEEEEEeccC
Confidence 9999999998654
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=8.2e-46 Score=375.68 Aligned_cols=181 Identities=31% Similarity=0.552 Sum_probs=155.1
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcC--CCCC----c--c-ccCcEEEEeecCceE
Q 006162 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKS--TGKP----L--H-YKGTMFHRIIKGFMI 73 (658)
Q Consensus 3 ~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~--~~k~----~--~-Y~Gt~F~RVipgfvI 73 (658)
...||+|||||+|+++++|+|+||||+++||+||+||++||++++.+... +++. + | |+|+.|||||++|||
T Consensus 11 ~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~Fmi 90 (234)
T 2ose_A 11 SGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYI 90 (234)
T ss_dssp CCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEE
T ss_pred CCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEE
Confidence 34789999999999999999999999999999999999999986322111 0111 3 5 999999999999999
Q ss_pred EeCCCCCCCCCCCccccCCC-----ccCCCCCCCCCCCceEeecc----CCCCCCCceEEEEecc------CccCCCCce
Q 006162 74 QGGDFSKGNGTGGESIYGGK-----FTDENFKLDHNGPGILSMAN----SGANTNGSQFFITFRR------QHHLDGKHV 138 (658)
Q Consensus 74 QgGd~~~~~g~gg~si~g~~-----~~dE~~~l~h~~~G~LSma~----~g~ns~gSqFFITL~~------~p~LDgkyt 138 (658)
||||+..++|.|+++|||.. |+ ++.|+|+.+|+|+||+ .|+|+++|||||||.+ ++|||++||
T Consensus 91 QgGd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~t 168 (234)
T 2ose_A 91 VSGDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQV 168 (234)
T ss_dssp EECCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSE
T ss_pred EcCCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCee
Confidence 99998889999999999987 66 5789999999999999 8999999999999999 999999999
Q ss_pred EEEEEEcCHHHHHHHHhcCCCC-CCccCCeEeceeeeccccccccchh
Q 006162 139 VFGKVVKGLNIVKKIEQVGTGD-GKPAQPVKIIDCGEFSESKIQDGKE 185 (658)
Q Consensus 139 VFGrVIeGmdVLdkI~~v~t~~-gkP~~~I~I~~cg~l~~~~~~~~k~ 185 (658)
|||+||+|||||++|+.+++++ ++|+.+|+|.+|++|.+++.+..|.
T Consensus 169 VFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~p~~~~~k~ 216 (234)
T 2ose_A 169 VIGQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLDSSQAQRKR 216 (234)
T ss_dssp EEEEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCCHHHHCC--
T ss_pred EEEEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecCCccccccc
Confidence 9999999999999999999985 8999999999999999887654433
No 20
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=4.7e-46 Score=361.67 Aligned_cols=159 Identities=57% Similarity=0.976 Sum_probs=122.4
Q ss_pred eEEEEEEeC--Ccee---eeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCcc-ccCcEEEEeecCceEEeCCCCCC
Q 006162 8 LVFLDVSID--GDPV---EKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLH-YKGTMFHRIIKGFMIQGGDFSKG 81 (658)
Q Consensus 8 ~V~fdtsig--g~~~---GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~-Y~Gt~F~RVipgfvIQgGd~~~~ 81 (658)
+|||||+++ |.+. |+|+||||+++||+||+||++||+|++| | |+|+.||||+++|||||||+..+
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~ 74 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG---------EGYRESTFHRIIPNFMIQGGDFTRG 74 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT---------TSSTTCBCCEEETTTEEEECC----
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEeCCCEEEeCCcCCC
Confidence 799999999 8877 9999999999999999999999987643 5 99999999999999999998888
Q ss_pred CCCCCccccCCCccCCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEc--CHHHHHHHHhcCCC
Q 006162 82 NGTGGESIYGGKFTDENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVK--GLNIVKKIEQVGTG 159 (658)
Q Consensus 82 ~g~gg~si~g~~~~dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIe--GmdVLdkI~~v~t~ 159 (658)
++.++++||+..|++|++.++|+.+|+|+||+.++|+++|||||||.++++||++|+|||+|++ ||+||++|+.++++
T Consensus 75 ~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~ 154 (172)
T 2c3b_A 75 NGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSS 154 (172)
T ss_dssp ------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCT
T ss_pred CCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999999998
Q ss_pred CC--CccCCeEeceeeec
Q 006162 160 DG--KPAQPVKIIDCGEF 175 (658)
Q Consensus 160 ~g--kP~~~I~I~~cg~l 175 (658)
++ +|+.+|+|.+||+|
T Consensus 155 ~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 155 SGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp TSCCCSSSCCEEEEEEEC
T ss_pred CCCccCCCCeEEEeCeeC
Confidence 66 99999999999986
No 21
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=9.6e-44 Score=351.80 Aligned_cols=164 Identities=45% Similarity=0.747 Sum_probs=151.5
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g 83 (658)
+.+.+|.|+|++| +|+||||+++||+||+||++||+. +||+|+.|||||++|||||||+. +++
T Consensus 17 ~~~~~v~l~T~~G-----~I~ieL~~~~aP~tv~NF~~L~~~-----------g~Ydg~~FhRVi~~f~iQgGd~~-~~g 79 (197)
T 1zkc_A 17 RGSGYVRLHTNKG-----DLNLELHCDLTPKTCENFIRLCKK-----------HYYDGTIFHRSIRNFVIQGGDPT-GTG 79 (197)
T ss_dssp CSCEEEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHHT-----------TTTTTEEEEEEETTTEEEECCTT-SSS
T ss_pred CCCcEEEEEeCCc-----cEEEEEcCCCCcHHHHHHHHHHhc-----------CCCCCCEEEEEeCCCEEEcCCCC-CCC
Confidence 3467888888866 999999999999999999999964 48999999999999999999984 778
Q ss_pred CCCccccCCCccCC-CCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCC--
Q 006162 84 TGGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD-- 160 (658)
Q Consensus 84 ~gg~si~g~~~~dE-~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~-- 160 (658)
.|++++||..|++| ++.|.|+.+|+|+||+.++|++++||||||.++++||++|+|||+||+||+||++|+.++++.
T Consensus 80 ~Gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~ 159 (197)
T 1zkc_A 80 TGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKT 159 (197)
T ss_dssp SCCCBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTT
T ss_pred CCCCccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCC
Confidence 89999999999999 578999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCccCCeEeceeeeccccccccch
Q 006162 161 GKPAQPVKIIDCGEFSESKIQDGK 184 (658)
Q Consensus 161 gkP~~~I~I~~cg~l~~~~~~~~k 184 (658)
++|+.+|+|.+|++|.++|.+.++
T Consensus 160 ~~P~~~i~I~~~~v~~dPf~d~~~ 183 (197)
T 1zkc_A 160 DRPKEEIRIDATTVFVDPYEEADA 183 (197)
T ss_dssp CCBSSCCEEEEEEEEECTTHHHHH
T ss_pred CCcCCCeEEEEEEEEcCCcccHHH
Confidence 899999999999999998866543
No 22
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=6.1e-44 Score=354.80 Aligned_cols=164 Identities=38% Similarity=0.632 Sum_probs=142.8
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeC-----CC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGG-----DF 78 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgG-----d~ 78 (658)
+++.+|.|+|++| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||| |+
T Consensus 4 ~~~~~v~l~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Ydg~~FhRvi~~f~iQgG~~~~~Dp 67 (201)
T 3bo7_A 4 KKKGYLRIVTTQG-----SLNIELHADMAPRACDSFLRLCAV-----------KYFDDTIFHRCIRNFMIQGGRAELRQP 67 (201)
T ss_dssp -CCEEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHT-----------TTTTTCBEEEEETTTEEEECCGGGCCC
T ss_pred CCceEEEEEeCCC-----CEEEEEcCCCCcHHHHHHHHHHhc-----------CccCCCEEEEeeCCCEEEcCcccccCC
Confidence 4577899999866 999999999999999999999964 48999999999999999999 87
Q ss_pred CCCCCCCCcccc-------CCCccCC-CCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHH
Q 006162 79 SKGNGTGGESIY-------GGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIV 150 (658)
Q Consensus 79 ~~~~g~gg~si~-------g~~~~dE-~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVL 150 (658)
. +++.|+.++| +..|++| ++.|.|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+||+||
T Consensus 68 ~-~~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv 146 (201)
T 3bo7_A 68 S-KKKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVL 146 (201)
T ss_dssp --------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHH
T ss_pred C-CCCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHH
Confidence 4 7788899999 8899999 57899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCC-CCCccCCeEeceeeeccccccccch
Q 006162 151 KKIEQVGTG-DGKPAQPVKIIDCGEFSESKIQDGK 184 (658)
Q Consensus 151 dkI~~v~t~-~gkP~~~I~I~~cg~l~~~~~~~~k 184 (658)
++|+.++++ +++|+.+|+|.+|++|.++|.+.++
T Consensus 147 ~~I~~~~t~~~~~P~~~i~I~~~~v~~dPf~d~~~ 181 (201)
T 3bo7_A 147 RQWEKLETDKKDKPLKPPKVEEIIVFKNPFEDARK 181 (201)
T ss_dssp HHHTTCCBCTTSCBSSCCBEEEEEEEECCC-----
T ss_pred HHHHhCCcCCCCCcCCCeEEEEEEEEcCCccCHHH
Confidence 999999998 4899999999999999999877643
No 23
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=1.7e-43 Score=347.21 Aligned_cols=161 Identities=42% Similarity=0.653 Sum_probs=146.3
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~ 84 (658)
..+.|.|+|++ |+|+||||+++||+||+||++||+++ ||+|+.||||+++|||||||+. +++.
T Consensus 15 ~~~~v~i~t~~-----G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~ 77 (185)
T 2poe_A 15 YFQGVRIITNY-----GDLKFELFCSQCPKACKNFLALSASG-----------YYKNTIFHKNIKGFIIQGGDPT-GTGK 77 (185)
T ss_dssp CCCEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTEEEEEECTTSEEEEEETT-SSSS
T ss_pred CceEEEEEecC-----ccEEEEEeCCCCcHHHHHHHHHhccC-----------CCCCCEEEEEECCCEEEcCCCC-CCCC
Confidence 45677777664 49999999999999999999999653 8999999999999999999985 7788
Q ss_pred CCccccCCCccCCC-CCCCCCCCceEeeccCC----CCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC
Q 006162 85 GGESIYGGKFTDEN-FKLDHNGPGILSMANSG----ANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG 159 (658)
Q Consensus 85 gg~si~g~~~~dE~-~~l~h~~~G~LSma~~g----~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~ 159 (658)
++.++||..|++|+ +.|+|+.+|+|+||+.+ +|+++|||||||+++++||++|+|||+||+||+||++|+.++++
T Consensus 78 gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~ 157 (185)
T 2poe_A 78 GGESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSD 157 (185)
T ss_dssp CCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBC
T ss_pred CCCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcC
Confidence 89999999999997 78999999999999999 99999999999999999999999999999999999999999997
Q ss_pred -CCCccCCeEeceeeecccccccc
Q 006162 160 -DGKPAQPVKIIDCGEFSESKIQD 182 (658)
Q Consensus 160 -~gkP~~~I~I~~cg~l~~~~~~~ 182 (658)
+++|+.+|+|.+|+++.++|.+.
T Consensus 158 ~~~~P~~~v~I~~~~i~~dPf~d~ 181 (185)
T 2poe_A 158 KSHKPIDEIIIKDIVIHSNPIADQ 181 (185)
T ss_dssp TTSCBSSCCEEEEEEEECCC----
T ss_pred CCCCcCCCeEEEEEEEECCCCCCc
Confidence 58999999999999999988654
No 24
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=3.5e-43 Score=338.18 Aligned_cols=156 Identities=48% Similarity=0.778 Sum_probs=145.4
Q ss_pred eEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCCCc
Q 006162 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (658)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~gg~ 87 (658)
.|.|+|++| +|+||||+++||+||+||++||+++ ||+|+.||||+++||||||++. +++.+++
T Consensus 2 ~v~~~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~ 64 (161)
T 2ok3_A 2 SVTLHTDVG-----DIKIEVFCERTPKTCENFLALCASN-----------YYNGCIFHRNIKGFMVQTGDPT-GTGRGGN 64 (161)
T ss_dssp EEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTT-SSSSCCC
T ss_pred EEEEEeCCc-----cEEEEEcCCCCcHHHHHHHHHhhhc-----------ccCCCEEEEEECCCEEecCCCC-CCCCCCC
Confidence 577777655 9999999999999999999999654 8999999999999999999985 7788899
Q ss_pred cccCCCccCCCC-CCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCC--CCcc
Q 006162 88 SIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD--GKPA 164 (658)
Q Consensus 88 si~g~~~~dE~~-~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~--gkP~ 164 (658)
++|+..|++|+. .|+|+.+|+|+||+.++|+++|||||||+++++||++|+|||+|++|||||++|+.+++++ ++|+
T Consensus 65 si~g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~ 144 (161)
T 2ok3_A 65 SIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPL 144 (161)
T ss_dssp CTTSSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBS
T ss_pred cccCCccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcC
Confidence 999999999975 7899999999999999999999999999999999999999999999999999999999984 7999
Q ss_pred CCeEeceeeecccccc
Q 006162 165 QPVKIIDCGEFSESKI 180 (658)
Q Consensus 165 ~~I~I~~cg~l~~~~~ 180 (658)
.+|+|.+|.++.++|.
T Consensus 145 ~~v~I~~~~i~~~Pf~ 160 (161)
T 2ok3_A 145 NDVHIKDITIHANPFA 160 (161)
T ss_dssp SCCBEEEEEEECCSCC
T ss_pred CCeEEEEEEEecCCCC
Confidence 9999999999998874
No 25
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=3.9e-43 Score=339.36 Aligned_cols=156 Identities=48% Similarity=0.803 Sum_probs=145.5
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCC
Q 006162 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (658)
Q Consensus 3 ~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~ 82 (658)
...++.|+|+|++| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||||+. ++
T Consensus 8 ~~~~~~v~l~t~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Y~g~~fhRvi~~f~iQgGd~~-~~ 70 (166)
T 2x7k_A 8 SWQPPNVYLETSMG-----IIVLELYWKHAPKTCKNFAELARR-----------GYYNGTKFHRIIKDFMIQGGDPT-GT 70 (166)
T ss_dssp TCCCSEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHH-----------TTTTTEECCEEETTTEEEECCTT-SS
T ss_pred ccCCCEEEEEeCCC-----cEEEEEccCCCCHHHHHHHHHHhc-----------CCCCCCEEEEEECCCEEEcCCCC-CC
Confidence 34689999999866 999999999999999999999954 48999999999999999999984 77
Q ss_pred CCCCccccCCCccCCC-CCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCCC-
Q 006162 83 GTGGESIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGD- 160 (658)
Q Consensus 83 g~gg~si~g~~~~dE~-~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~- 160 (658)
+.++.+||+..|++|+ +.|+|..+|+|+||+.++|+++|||||||.++++||++|+|||+|++|||||++|+.+++++
T Consensus 71 g~gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~ 150 (166)
T 2x7k_A 71 GRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ 150 (166)
T ss_dssp SSCCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTT
T ss_pred CCCCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCC
Confidence 8889999999999997 58999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCccCCeEeceeeec
Q 006162 161 GKPAQPVKIIDCGEF 175 (658)
Q Consensus 161 gkP~~~I~I~~cg~l 175 (658)
++|+.+|+|.+|.++
T Consensus 151 ~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 151 DRPVDDVKIIKAYPS 165 (166)
T ss_dssp SCBSSCCEEEEEEEC
T ss_pred CCcCCCeEEEEEEEe
Confidence 799999999999875
No 26
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.7e-43 Score=345.20 Aligned_cols=157 Identities=43% Similarity=0.718 Sum_probs=144.0
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~ 84 (658)
.++.|+|+|++| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||||+. +++.
T Consensus 37 ~~~~V~l~T~~G-----~I~ieL~~~~aP~tv~NF~~L~~~-----------g~Y~g~~FhRVi~~f~iQgGd~~-~~g~ 99 (196)
T 2b71_A 37 ERGYITIYTNLG-----DFEVELYWYHSPKTCLNFYTLCEM-----------GFYDNTIFHRVIPNFVIQGGDPT-GTGK 99 (196)
T ss_dssp HSCEEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHHT-----------TTTTTEEEEEEETTTEEEEEETT-SSSS
T ss_pred CCcEEEEEeCCC-----CEEEEEeCCCCcHHHHHHHHHhhc-----------CCcCCCEEEEEeCCcEEEcCCCC-CCCC
Confidence 468999999865 999999999999999999999964 48999999999999999999985 7788
Q ss_pred CCccccCCCccCC-CCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC-CCC
Q 006162 85 GGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGK 162 (658)
Q Consensus 85 gg~si~g~~~~dE-~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~-~gk 162 (658)
|+.+|||..|++| ++.|+|+.+|+|+||+.++|+++|||||||+++++||++|+|||+||+||+||++|+.++++ +++
T Consensus 100 gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 179 (196)
T 2b71_A 100 GGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNK 179 (196)
T ss_dssp CCCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCC
T ss_pred CCCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCC
Confidence 9999999999999 46899999999999999999999999999999999999999999999999999999999997 589
Q ss_pred ccCCeEeceeeecccc
Q 006162 163 PAQPVKIIDCGEFSES 178 (658)
Q Consensus 163 P~~~I~I~~cg~l~~~ 178 (658)
|+.+|+|.+|.++.++
T Consensus 180 P~~~i~I~~~~i~~dP 195 (196)
T 2b71_A 180 PIFDLKILRTSTAVNA 195 (196)
T ss_dssp BSSCCEEEEEEC----
T ss_pred CCCCeEEEEEEEecCC
Confidence 9999999999988764
No 27
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-42 Score=342.77 Aligned_cols=162 Identities=40% Similarity=0.683 Sum_probs=145.9
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcC-CC---CCccccCcEEEEeecCceEEeCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKS-TG---KPLHYKGTMFHRIIKGFMIQGGDFSK 80 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~-~~---k~~~Y~Gt~F~RVipgfvIQgGd~~~ 80 (658)
.++.|.|+|++| +|+||||+++||+||+||++||+|++++... ++ +.+||+|+.|||||++|||||||+ .
T Consensus 22 ~~~~v~l~t~~G-----~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~-~ 95 (191)
T 1w74_A 22 ATATATLHTNRG-----DIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP-T 95 (191)
T ss_dssp CSEEEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT-T
T ss_pred CCeEEEEEecce-----eEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC-C
Confidence 578899998866 9999999999999999999999999876422 22 357999999999999999999997 4
Q ss_pred CCCCCCccccCCCccCC-CCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEc--CHHHHHHHHhcC
Q 006162 81 GNGTGGESIYGGKFTDE-NFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVK--GLNIVKKIEQVG 157 (658)
Q Consensus 81 ~~g~gg~si~g~~~~dE-~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIe--GmdVLdkI~~v~ 157 (658)
+++.++ +|..|++| ++.|+|+.+|+|+||+.++|+++|||||||.++++||++|+|||+||+ ||+||++|+.++
T Consensus 96 g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~ 172 (191)
T 1w74_A 96 GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTA 172 (191)
T ss_dssp SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSC
T ss_pred CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCC
Confidence 566666 57889999 578999999999999999999999999999999999999999999999 999999999999
Q ss_pred CC-CCCccCCeEeceeeec
Q 006162 158 TG-DGKPAQPVKIIDCGEF 175 (658)
Q Consensus 158 t~-~gkP~~~I~I~~cg~l 175 (658)
++ +++|+.+|+|.+|+++
T Consensus 173 t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 173 TDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp BCTTSCBSSCCEEEEEEEC
T ss_pred cCCCCCcCCCeEEEEEEEC
Confidence 97 5899999999999864
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=9.7e-43 Score=345.92 Aligned_cols=160 Identities=47% Similarity=0.782 Sum_probs=148.5
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCC
Q 006162 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (658)
Q Consensus 3 ~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~ 82 (658)
...++.|+|+|++| +|+||||+++||+||+||++||+. +||+|+.|||||++|||||||+. ++
T Consensus 8 ~~~~~~V~l~T~~G-----~I~ieL~~d~aP~tv~NF~~L~~~-----------g~Ydg~~FhRVi~~F~iQgGd~~-~~ 70 (203)
T 2k7n_A 8 SWQPPNVYLETSMG-----IIVLELYWKHAPKTCKNFAELARR-----------GYYNGTKFHRIIKDFMIQGGDPT-GT 70 (203)
T ss_dssp SCCCSEEEEEESSC-----EEEEEECTTTCTTHHHHHHHHHHH-----------TCGGGCEEEEEETTTEEEEECSS-SS
T ss_pred ccCCCEEEEEeCCC-----cEEEEEccCCCcHHHHHHHHHHhc-----------CccCCCEEEEEeCCcEEEcCCCC-CC
Confidence 34689999999876 999999999999999999999954 48999999999999999999984 67
Q ss_pred CCCCccccCCCccCCC-CCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC-C
Q 006162 83 GTGGESIYGGKFTDEN-FKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-D 160 (658)
Q Consensus 83 g~gg~si~g~~~~dE~-~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~-~ 160 (658)
+.++.+||+..|++|+ +.|+|..+|+|+||+.++|++++||||||.++++||++|+|||+||+|||||++|+.++++ +
T Consensus 71 g~gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~ 150 (203)
T 2k7n_A 71 GRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ 150 (203)
T ss_dssp SSCCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEET
T ss_pred CCCCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCC
Confidence 8889999999999997 5899999999999999999999999999999999999999999999999999999999987 4
Q ss_pred CCccCCeEeceeeeccccc
Q 006162 161 GKPAQPVKIIDCGEFSESK 179 (658)
Q Consensus 161 gkP~~~I~I~~cg~l~~~~ 179 (658)
++|+.+|+|.+|+++...+
T Consensus 151 ~~P~~~V~I~~~~v~~~~~ 169 (203)
T 2k7n_A 151 DRPVDDVKIIKAYPSGGGG 169 (203)
T ss_dssp TEECCCCBEEEEEECCCCC
T ss_pred CCcCCCeEEEEEEEEecCC
Confidence 7999999999999887653
No 29
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-42 Score=333.90 Aligned_cols=153 Identities=46% Similarity=0.677 Sum_probs=143.7
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCC
Q 006162 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTG 85 (658)
Q Consensus 6 nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~g 85 (658)
.+.|.|+|++| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||||+ .+++.+
T Consensus 5 ~~~v~~~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Y~g~~fhRvi~~f~iQgGd~-~~~g~g 67 (160)
T 2fu0_A 5 PKSAIIYTTMG-----DIHISLFYKECKKTVQNFSVHSIN-----------GYYNNCIFHRVIKHFMVQTGDP-SGDGTG 67 (160)
T ss_dssp CCEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHT-----------TTTTTCBCCEEETTTEEEECCT-TSSSSC
T ss_pred CCEEEEEecCc-----cEEEEEeCCCChHHHHHHHHHhcc-----------CccCCCEEEEEECCCEEEeCCc-CCCCCC
Confidence 57899999866 999999999999999999999964 4899999999999999999998 577889
Q ss_pred CccccCCCccCCCC-CCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC-CCCc
Q 006162 86 GESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG-DGKP 163 (658)
Q Consensus 86 g~si~g~~~~dE~~-~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~-~gkP 163 (658)
+++||+..|++|++ .|+|+.+|+|+||+.++|+++|||||||.++++||++|+|||+|++|||||++|+.++++ +++|
T Consensus 68 g~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P 147 (160)
T 2fu0_A 68 GESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKP 147 (160)
T ss_dssp CCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCc
Confidence 99999999999987 699999999999999999999999999999999999999999999999999999999998 6899
Q ss_pred cCCeEeceeeec
Q 006162 164 AQPVKIIDCGEF 175 (658)
Q Consensus 164 ~~~I~I~~cg~l 175 (658)
+.+|+|.+|.++
T Consensus 148 ~~~v~I~~~~v~ 159 (160)
T 2fu0_A 148 LEDIKILNIKIN 159 (160)
T ss_dssp SSCCBEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999999764
No 30
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=3.4e-42 Score=335.57 Aligned_cols=152 Identities=49% Similarity=0.756 Sum_probs=140.8
Q ss_pred CCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCC
Q 006162 6 NPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTG 85 (658)
Q Consensus 6 nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~g 85 (658)
...|.|+|++| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||||+ .+++.+
T Consensus 21 ~~~v~~~t~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Y~g~~FhRvi~~f~iQgGd~-~~~g~g 83 (176)
T 2a2n_A 21 SDSAIIHTSMG-----DIHTKLFPVECPKTVENFCVHSRN-----------GYYNGHTFHRIIKGFMIQTGDP-TGTGMG 83 (176)
T ss_dssp CSEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHT-----------TTTTTCBCCEEETTTEEEECCT-TSSSSC
T ss_pred CCEEEEEecCc-----cEEEEEeCCCChHHHHHHHHHhhc-----------CccCCCEEEEEECCcEEEccCC-CCCCCC
Confidence 45677777654 999999999999999999999964 3899999999999999999998 577889
Q ss_pred CccccCCCccCCCC-CCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHHHHHHhcCCC--CCC
Q 006162 86 GESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIVKKIEQVGTG--DGK 162 (658)
Q Consensus 86 g~si~g~~~~dE~~-~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~--~gk 162 (658)
+.+|||..|++|++ .|+|+.+|+|+||+.++|++++||||||.++++||++|+|||+||+|||||++|+.++++ +++
T Consensus 84 g~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~ 163 (176)
T 2a2n_A 84 GESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDK 163 (176)
T ss_dssp CCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCC
T ss_pred CCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCc
Confidence 99999999999987 699999999999999999999999999999999999999999999999999999999998 689
Q ss_pred ccCCeEeceeee
Q 006162 163 PAQPVKIIDCGE 174 (658)
Q Consensus 163 P~~~I~I~~cg~ 174 (658)
|+.+|+|.+|.+
T Consensus 164 P~~~v~I~~v~v 175 (176)
T 2a2n_A 164 PYEDVSIINITV 175 (176)
T ss_dssp BSSCCBEEEEEE
T ss_pred cCCCeEEEEEEE
Confidence 999999999964
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=337.33 Aligned_cols=160 Identities=41% Similarity=0.739 Sum_probs=146.5
Q ss_pred CCCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCC
Q 006162 3 EKKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGN 82 (658)
Q Consensus 3 ~~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~ 82 (658)
.+.++.|+|+|++| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||||+ .++
T Consensus 21 ~~~~~~V~l~T~~G-----~I~ieL~~~~aP~tv~NF~~L~~~-----------g~Y~g~~FhRvi~~f~iQgGd~-~~~ 83 (185)
T 2hq6_A 21 PPTNGKVLLKTTAG-----DIDIELWSKEAPKACRNFIQLCLE-----------AYYDNTIFHRVVPGFIVQGGDP-TGT 83 (185)
T ss_dssp CCCBCEEEEEETTE-----EEEEEEBTTTCHHHHHHHHHHHHT-----------TTTTTEECCEEETTTEEEECCT-TSS
T ss_pred CCCCCEEEEEeCCc-----cEEEEEeCCCCcHHHHHHHHHhhc-----------CccCCCEEEEEECCCEEEcCCC-CCC
Confidence 34678999999765 999999999999999999999964 3899999999999999999998 477
Q ss_pred CCCCccccCCCccCCCC-CCCCCCCceEeeccCCCCCCCceEEEEeccCccCCCCceEEEEEEcCHHHH--HHHHhcCCC
Q 006162 83 GTGGESIYGGKFTDENF-KLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDGKHVVFGKVVKGLNIV--KKIEQVGTG 159 (658)
Q Consensus 83 g~gg~si~g~~~~dE~~-~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDgkytVFGrVIeGmdVL--dkI~~v~t~ 159 (658)
+.++.+|||..|++|+. .|+|+.+|+|+||+.++|++++||||||+++++||++|+|||+|+ ||+|+ ++|+.++++
T Consensus 84 g~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~ 162 (185)
T 2hq6_A 84 GSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDID 162 (185)
T ss_dssp SSCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBC
T ss_pred CCCCCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcC
Confidence 88899999999999975 689999999999999999999999999999999999999999999 88764 678888886
Q ss_pred -CCCccCCeEeceeeecccccc
Q 006162 160 -DGKPAQPVKIIDCGEFSESKI 180 (658)
Q Consensus 160 -~gkP~~~I~I~~cg~l~~~~~ 180 (658)
+++|+.+|+|.+|++|.++|.
T Consensus 163 ~~~~P~~~v~I~~~~v~~~Pf~ 184 (185)
T 2hq6_A 163 DDERPHNPHKIKSCEVLFNPFD 184 (185)
T ss_dssp TTSCBSSCCEEEEEEEEECTTC
T ss_pred CCCCCCCCeEEEEEEEeCCCCC
Confidence 689999999999999998874
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-41 Score=343.12 Aligned_cols=162 Identities=33% Similarity=0.562 Sum_probs=146.6
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g 83 (658)
+.++.|+|+|++| +|+||||+++||+||+||++||++ +||+|+.|||||++|||||||+. +++
T Consensus 19 ~~~~~V~l~T~~G-----~I~ieL~~d~aP~tv~NF~~L~~~-----------g~Ydgt~FhRVi~~FmiQgGdp~-~~G 81 (232)
T 3bkp_A 19 STRGKVVLHTSLG-----DLDVELWARECPLACRNFVQLCLE-----------GYYVNTIFHRVVKDFIVQGGDPT-GTG 81 (232)
T ss_dssp SCBCEEEEEETTE-----EEEEEEBTTTCHHHHHHHHHHHHH-----------TTTTTCBEEEEETTTEEEECCTT-SSS
T ss_pred CCCCEEEEEECCC-----cEEEEEcCCCCcHHHHHHHHHhhc-----------CccCCCEEEEEeCCCEEEcCCCC-CCC
Confidence 4578999999865 999999999999999999999964 38999999999999999999985 778
Q ss_pred CCCcccc--CCCccCCCC-CCCCCCCceEeeccCCC--------------CCCCceEEEEeccCccCCCCceEEEEEEcC
Q 006162 84 TGGESIY--GGKFTDENF-KLDHNGPGILSMANSGA--------------NTNGSQFFITFRRQHHLDGKHVVFGKVVKG 146 (658)
Q Consensus 84 ~gg~si~--g~~~~dE~~-~l~h~~~G~LSma~~g~--------------ns~gSqFFITL~~~p~LDgkytVFGrVIeG 146 (658)
.|+.+|| |..|++|+. .|.|+.+|+|+||+.++ ++++|||||||.++++||++|||||+|+ |
T Consensus 82 ~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g 160 (232)
T 3bkp_A 82 RGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-G 160 (232)
T ss_dssp SCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-G
T ss_pred CCCCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-e
Confidence 8999999 889999975 78999999999999987 6999999999999999999999999999 6
Q ss_pred HHH--HHHHHhcCCC-CCCccCCeEeceeeeccccccccc
Q 006162 147 LNI--VKKIEQVGTG-DGKPAQPVKIIDCGEFSESKIQDG 183 (658)
Q Consensus 147 mdV--LdkI~~v~t~-~gkP~~~I~I~~cg~l~~~~~~~~ 183 (658)
|+| |++|+.++++ +++|+.+|+|.+|++|.++|.+..
T Consensus 161 ~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf~d~~ 200 (232)
T 3bkp_A 161 HTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFEDLV 200 (232)
T ss_dssp GGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCCTTCC
T ss_pred CchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCChhhhh
Confidence 655 8999999997 689999999999999999986654
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=3e-41 Score=326.19 Aligned_cols=153 Identities=36% Similarity=0.541 Sum_probs=136.7
Q ss_pred CCCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCC
Q 006162 4 KKNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNG 83 (658)
Q Consensus 4 ~~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g 83 (658)
+.||.|+|+|++| +|+||||+++||+||+||++||.. +||+|+.||||+++|||||||+....
T Consensus 2 ~~~~~v~~~t~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Y~g~~FhRvi~~f~iQgGd~~~~~- 64 (166)
T 1v9t_A 2 KGDPHVLLTTSAG-----NIELELDKQKAPVSVQNFVDYVNS-----------GFYNNTTFHRVIPGFMIQGGGFTEQM- 64 (166)
T ss_dssp CCSCEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHT-----------TTTTTCBEEEEETTTEEEESSBCTTC-
T ss_pred CCCeEEEEEeCCc-----cEEEEEcCCCCcHHHHHHHHHhcc-----------CCCCCCEEEEEECCcEEEcCCcCcCC-
Confidence 5789999999765 999999999999999999999953 48999999999999999999986543
Q ss_pred CCCccccCCCccCCCCCCCCCCCceEeeccC-CCCCCCceEEEEeccCccCCCC-----ceEEEEEEcCHHHHHHHHhcC
Q 006162 84 TGGESIYGGKFTDENFKLDHNGPGILSMANS-GANTNGSQFFITFRRQHHLDGK-----HVVFGKVVKGLNIVKKIEQVG 157 (658)
Q Consensus 84 ~gg~si~g~~~~dE~~~l~h~~~G~LSma~~-g~ns~gSqFFITL~~~p~LDgk-----ytVFGrVIeGmdVLdkI~~v~ 157 (658)
+...++..|++|++...|+.+|+|+||+. ++|+++|||||||.++++||++ |+|||+||+|||||++|+.++
T Consensus 65 --~~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~ 142 (166)
T 1v9t_A 65 --QQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVP 142 (166)
T ss_dssp --CBCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSC
T ss_pred --CCCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCC
Confidence 23345778999987666677999999996 6999999999999999999998 999999999999999999999
Q ss_pred CCC-----CCccCCeEeceeeec
Q 006162 158 TGD-----GKPAQPVKIIDCGEF 175 (658)
Q Consensus 158 t~~-----gkP~~~I~I~~cg~l 175 (658)
+++ ++|+.+|+|.+|.++
T Consensus 143 ~~~~~~~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 143 THDVGPYQNVPSKPVVILSATVL 165 (166)
T ss_dssp EEEETTEEEEESSCCBEEEEEEC
T ss_pred CCCCCccCCCcCCCeEEEEEEEe
Confidence 874 689999999999875
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=2.5e-40 Score=319.96 Aligned_cols=152 Identities=36% Similarity=0.506 Sum_probs=134.7
Q ss_pred CCCeEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCC
Q 006162 5 KNPLVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGT 84 (658)
Q Consensus 5 ~nP~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~ 84 (658)
.+|.|.|+|++| +|+||||+++||+||+||++||++ +||+|+.||||+++|||||||+....
T Consensus 2 p~~~v~l~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Y~g~~FhRvi~~f~iQgGd~~~~~-- 63 (167)
T 3s6m_A 2 PGSMVELHTNHG-----VIKLELDEAKAPKTVENFLNYVKK-----------GHYDGTIFHRVINGFMIQGGGFEPGL-- 63 (167)
T ss_dssp CCCEEEEEETTE-----EEEEEECTTTCHHHHHHHHHHHHH-----------TTTTTEECCEEETTTEEEESSEETTT--
T ss_pred CCcEEEEEeCCc-----eEEEEEeCCCCcHHHHHHHHHhhh-----------cccCCCEeEEecCCcEEEeccccCCC--
Confidence 478999999876 999999999999999999999964 48999999999999999999986443
Q ss_pred CCccccCCCccCCCCCCCCCCCceEeecc-CCCCCCCceEEEEeccCccCCCC--------ceEEEEEEcCHHHHHHHHh
Q 006162 85 GGESIYGGKFTDENFKLDHNGPGILSMAN-SGANTNGSQFFITFRRQHHLDGK--------HVVFGKVVKGLNIVKKIEQ 155 (658)
Q Consensus 85 gg~si~g~~~~dE~~~l~h~~~G~LSma~-~g~ns~gSqFFITL~~~p~LDgk--------ytVFGrVIeGmdVLdkI~~ 155 (658)
+..+++..|++|.....++.+|+|+||+ .++|+++|||||||.++++||++ |+|||+|++|||||++|+.
T Consensus 64 -~~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~ 142 (167)
T 3s6m_A 64 -KQKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKA 142 (167)
T ss_dssp -EECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTT
T ss_pred -CCCCCCCccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHc
Confidence 2345577888886544445799999999 67999999999999999999998 9999999999999999999
Q ss_pred cCCCC-----CCccCCeEeceeeec
Q 006162 156 VGTGD-----GKPAQPVKIIDCGEF 175 (658)
Q Consensus 156 v~t~~-----gkP~~~I~I~~cg~l 175 (658)
+++++ ++|+.+|+|.+|.+|
T Consensus 143 ~~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 143 VKTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp SCBBC---CBTCBSSCCEEEEEEEC
T ss_pred CCcCCCcccCCCcCCCeEEEEEEEC
Confidence 99974 799999999999865
No 35
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.1e-40 Score=319.70 Aligned_cols=148 Identities=34% Similarity=0.546 Sum_probs=132.6
Q ss_pred eEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCCCc
Q 006162 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGE 87 (658)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~gg~ 87 (658)
+|.|+|++| +|+||||+++||+||+||++||+. +||+|+.||||+++|||||||+..+. +.
T Consensus 1 ~v~l~T~~G-----~i~ieL~~~~aP~t~~NF~~L~~~-----------g~Y~g~~FhRvi~~f~iQgGd~~~~~---g~ 61 (164)
T 1lop_A 1 MVTFHTNHG-----DIVIKTFDDKAPETVKNFLDYCRE-----------GFYNNTIFHRVINGFMIQGGGFEPGM---KQ 61 (164)
T ss_dssp CEEEEETTE-----EEEEEECTTTSHHHHHHHHHHHHT-----------TTTTTEECCEEETTTEEEESSEETTT---EE
T ss_pred CEEEEeCCC-----CEEEEEeCCCCcHHHHHHHHHHhc-----------CCCCCCEEEEEeCCceEecCCcccCC---Cc
Confidence 477888765 999999999999999999999954 48999999999999999999986433 45
Q ss_pred cccCCCccCCCCC-CCCCCCceEeecc-CCCCCCCceEEEEeccCccCCCC--------ceEEEEEEcCHHHHHHHHhcC
Q 006162 88 SIYGGKFTDENFK-LDHNGPGILSMAN-SGANTNGSQFFITFRRQHHLDGK--------HVVFGKVVKGLNIVKKIEQVG 157 (658)
Q Consensus 88 si~g~~~~dE~~~-l~h~~~G~LSma~-~g~ns~gSqFFITL~~~p~LDgk--------ytVFGrVIeGmdVLdkI~~v~ 157 (658)
.+++..|++|++. |.| .+|+|+||+ .++|+++|||||||.++++||++ |+|||+||+|||||++|+.++
T Consensus 62 ~~~g~~~~dE~~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~ 140 (164)
T 1lop_A 62 KATKEPIKNEANNGLKN-TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVA 140 (164)
T ss_dssp CCCCCCBCCCCCSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSC
T ss_pred CCCCCcccccccccccc-CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCC
Confidence 6788999999865 555 699999997 57999999999999999999998 999999999999999999999
Q ss_pred CCC-----CCccCCeEeceeeec
Q 006162 158 TGD-----GKPAQPVKIIDCGEF 175 (658)
Q Consensus 158 t~~-----gkP~~~I~I~~cg~l 175 (658)
+++ ++|+.+|+|.+|+++
T Consensus 141 t~~~~~~~~~P~~~v~I~~~~v~ 163 (164)
T 1lop_A 141 TGRSGMHQDVPKEDVIIESVTVS 163 (164)
T ss_dssp EEEETTEEEEESSCCEEEEEEEC
T ss_pred cCCccccCCCcCCCeEEEEEEEe
Confidence 863 799999999999875
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.5e-35 Score=313.65 Aligned_cols=149 Identities=26% Similarity=0.420 Sum_probs=127.8
Q ss_pred CCCeEEEEEEeCCc---eeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCC
Q 006162 5 KNPLVFLDVSIDGD---PVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKG 81 (658)
Q Consensus 5 ~nP~V~fdtsigg~---~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~ 81 (658)
.++.|+|+|++++. .+|+|+||||+++||+||+||++||+. +||+|+.|||| ++|||||||+. +
T Consensus 169 gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~-----------GfYdGt~FHRV-~gFmIQgGDp~-g 235 (369)
T 3rfy_A 169 GRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVER-----------HFYDGMEIQRS-DGFVVQTGDPE-G 235 (369)
T ss_dssp SEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHT-----------TTTTTEECEEE-EEEEECCCCCC-C
T ss_pred CCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhc-----------CCcCCCeeeee-CCeeEecCCCC-C
Confidence 46788999987643 589999999999999999999999954 49999999999 99999999985 4
Q ss_pred CCCC---------------------CccccCCCccCCCC-----CCCCCCCceEeeccC--CCCCCCceEEEEec-----
Q 006162 82 NGTG---------------------GESIYGGKFTDENF-----KLDHNGPGILSMANS--GANTNGSQFFITFR----- 128 (658)
Q Consensus 82 ~g~g---------------------g~si~g~~~~dE~~-----~l~h~~~G~LSma~~--g~ns~gSqFFITL~----- 128 (658)
++.| +..+|+..|++|++ .|+|+.+|+|+||+. ++|+++|||||||.
T Consensus 236 ~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~ 315 (369)
T 3rfy_A 236 PAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELT 315 (369)
T ss_dssp CCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEEC
T ss_pred CCCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccC
Confidence 4444 45788888888864 789999999999997 89999999999994
Q ss_pred --cCccCCCCceEEEEEEcCHHHHHHHHhcCCCCCCccCCeEece
Q 006162 129 --RQHHLDGKHVVFGKVVKGLNIVKKIEQVGTGDGKPAQPVKIID 171 (658)
Q Consensus 129 --~~p~LDgkytVFGrVIeGmdVLdkI~~v~t~~gkP~~~I~I~~ 171 (658)
+.+|||++|+|||+||+|||||++|+. |..+..|+|+.
T Consensus 316 ~~~~~~LDgkytVFG~VveGmdVVdkI~~-----GD~I~sv~I~~ 355 (369)
T 3rfy_A 316 PSNSNILDGRYAVFGYVTDNEDFLADLKV-----GDVIESIQVVS 355 (369)
T ss_dssp SCCCSSSCSCEEEEEEEEESTTGGGGCCT-----TCEEEEEEEEE
T ss_pred CCCCcccCCCeeEEEEEecCHHHHHHHhC-----CCceEEEEEec
Confidence 689999999999999999999999987 44455555554
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=96.81 E-value=0.0012 Score=62.66 Aligned_cols=105 Identities=19% Similarity=0.209 Sum_probs=62.9
Q ss_pred EEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCCCcccc
Q 006162 11 LDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGESIY 90 (658)
Q Consensus 11 fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~gg~si~ 90 (658)
|.|+++|. .|+++|+.+.||+||+.|+++.= +..... +. -+ -+.+ ++.
T Consensus 32 I~i~~~~~---~~~a~L~D~~aP~Ta~~f~~~LP--------------l~~~~~-~~-g~-E~y~-~lp----------- 79 (153)
T 2nnz_A 32 LRIRFESA---ECEVELYEEWAPETVRAIADALP--------------IKSTAN-RW-GD-EIYF-TTQ----------- 79 (153)
T ss_dssp EEEEETTE---EEEECCCTTSCHHHHHHHHHTCS--------------EEEEEE-EE-TT-EEEE-CCS-----------
T ss_pred EEEEECCE---EEEEEEcCCCCHHHHHHHHHhCC--------------cEEEHH-hh-CC-cEEE-ECC-----------
Confidence 55667763 79999999999999999999871 222211 11 11 1111 110
Q ss_pred CCCccC-CCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCC------CCceEEEEEEcCHHHHHHHH
Q 006162 91 GGKFTD-ENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLD------GKHVVFGKVVKGLNIVKKIE 154 (658)
Q Consensus 91 g~~~~d-E~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LD------gkytVFGrVIeGmdVLdkI~ 154 (658)
..+.. |+. ......|-|++.-.+ ..|.|-+++.+.+. ...++||+|++|++.|..|.
T Consensus 80 -~~l~~~en~-~~~~~~GDI~Yy~pg-----~~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 80 -VAVEKEENS-KDVVELGDVAYWIPG-----KAICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp -CCCCCSSCC-BCCCCTTEEEEETTT-----TEEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred -CCCCCCCCC-cccCCCCeEEEeCCC-----CEEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 01111 332 233468988887533 24777777764332 23689999999988776643
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=96.76 E-value=0.0074 Score=58.39 Aligned_cols=118 Identities=19% Similarity=0.248 Sum_probs=68.6
Q ss_pred EEEEEeCCceee-eEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCc--eEEeCCCCCCCCCCC
Q 006162 10 FLDVSIDGDPVE-KIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGF--MIQGGDFSKGNGTGG 86 (658)
Q Consensus 10 ~fdtsigg~~~G-rIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgf--vIQgGd~~~~~g~gg 86 (658)
||.|++... | .++.+|..+.||+||+.|+++. =|.+..+|-..-+. |+-.+++..
T Consensus 23 ~i~itl~~~--g~~~~A~Lldd~APkTcaA~~~~L--------------P~~~~viHarwSGeeVy~~lp~f~~------ 80 (188)
T 3kop_A 23 YINITLEKR--GVTCKALLLDDVAPRTSKAVWDAL--------------PQSSQVFHGKYARNEIYNLVPAFAP------ 80 (188)
T ss_dssp EEEEEETTT--TEEEEEEECTTTSHHHHHHHHHHC--------------CEEEECEECSSSSSEEEEEEECCSS------
T ss_pred EEEEEEecC--CeEEEEEEccccChHHHHHHHHhC--------------CCCcceEEEEEecceEEEECCcccc------
Confidence 666766521 2 5899999999999999999976 14555555444332 333333310
Q ss_pred ccccCCCccCCCCCCCCCCCceEeeccC----------CC--------CCCCceEEEEeccCcc-CCCC-----ceEEEE
Q 006162 87 ESIYGGKFTDENFKLDHNGPGILSMANS----------GA--------NTNGSQFFITFRRQHH-LDGK-----HVVFGK 142 (658)
Q Consensus 87 ~si~g~~~~dE~~~l~h~~~G~LSma~~----------g~--------ns~gSqFFITL~~~p~-LDgk-----ytVFGr 142 (658)
..+..||..... .+|-|++..- |- .....++.|-.+.+.. |.++ -.||++
T Consensus 81 -----~~~g~EN~T~~P-~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~T 154 (188)
T 3kop_A 81 -----KEPGAENTTVTP-IPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFAT 154 (188)
T ss_dssp -----SCCCSCSEESSC-CTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEE
T ss_pred -----cCCCcCCCCCCC-CCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEE
Confidence 223445554433 3777665310 10 0112456665555442 2221 478999
Q ss_pred EEcCHHHHHHHHh
Q 006162 143 VVKGLNIVKKIEQ 155 (658)
Q Consensus 143 VIeGmdVLdkI~~ 155 (658)
|++|+|.|.++.+
T Consensus 155 IveGle~la~~c~ 167 (188)
T 3kop_A 155 IVEGLDEMAAACQ 167 (188)
T ss_dssp EEESHHHHHHHHH
T ss_pred EecCHHHHHHHHH
Confidence 9999998877764
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=93.12 E-value=0.22 Score=46.28 Aligned_cols=105 Identities=18% Similarity=0.169 Sum_probs=61.5
Q ss_pred EEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecCceEEeCCCCCCCCCCCcc
Q 006162 9 VFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKGFMIQGGDFSKGNGTGGES 88 (658)
Q Consensus 9 V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipgfvIQgGd~~~~~g~gg~s 88 (658)
.-+++-++|. .|+++|+.. |.||..|+++. +.++....|. .-++-.+|-.
T Consensus 13 ~~~~~~~~~~---~v~a~L~Dn--p~Ta~~~~~~L-------Pl~~~~~~~g-~E~y~~~p~~----------------- 62 (136)
T 1zx8_A 13 MRVELLFESG---KCVIDLNEE--YEVVKLLKEKI-------PFESVVNTWG-EEIYFSTPVN----------------- 62 (136)
T ss_dssp EEEEEECSSC---EEEEEEETT--SHHHHHHHHHC-------SEEEECEESS-SEEEEECSCC-----------------
T ss_pred eEEEEeeCCc---EEEEEEcCC--HHHHHHHHHHC-------CcEEEHHHhC-CcEEEECCcc-----------------
Confidence 3455555654 799999766 88999999987 2222223342 2222222211
Q ss_pred ccCCCcc-CCCCCCCCCCCceEeeccCCCCCCCceEEEEeccCccCCC------CceEEEEEEcCHHHHHHHH
Q 006162 89 IYGGKFT-DENFKLDHNGPGILSMANSGANTNGSQFFITFRRQHHLDG------KHVVFGKVVKGLNIVKKIE 154 (658)
Q Consensus 89 i~g~~~~-dE~~~l~h~~~G~LSma~~g~ns~gSqFFITL~~~p~LDg------kytVFGrVIeGmdVLdkI~ 154 (658)
+. +|+.. .....|-|+..-.+ .-|.|-+++.+.+.+ ..+|||+|++|++.|..|.
T Consensus 63 -----l~~~e~~~-~~~~~GDIaYw~pg-----g~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~ 124 (136)
T 1zx8_A 63 -----VQKMENPR-EVVEIGDVGYWPPG-----KALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIK 124 (136)
T ss_dssp -----CCCCSSEE-SSBCTTEEEEEGGG-----TEEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCC
T ss_pred -----CCCCCCCC-ccCCCCcEEEeCCC-----CEEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCC
Confidence 11 12222 22357888876543 357777777754433 3789999999988776543
No 40
>3q6c_A Probable receptor YHHM; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.60A {Klebsiella variicola at-22}
Probab=36.23 E-value=27 Score=29.63 Aligned_cols=46 Identities=30% Similarity=0.447 Sum_probs=31.3
Q ss_pred eEEEEEEeCCceeeeEEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecC
Q 006162 8 LVFLDVSIDGDPVEKIVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKG 70 (658)
Q Consensus 8 ~V~fdtsigg~~~GrIvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipg 70 (658)
.|+|++..+|. +|.|.|- ...|-.|+.|..| .+.|+|+.|....++
T Consensus 36 ~itF~~~~~G~---~~ef~v~-------~~~Y~~l~~Gd~G-------~Lt~QGTRF~~F~~~ 81 (83)
T 3q6c_A 36 EASFRPENGGL---EVVFRLD-------APQYHALSVGDRG-------MLSYKGTAFVAFTPD 81 (83)
T ss_dssp EEEEEEC--CC---CEEEEEC-------HHHHHHCCTTCEE-------EEEEETTEEEEEEEC
T ss_pred EEEEEECCCCc---eEEEEEC-------HHHcCCCCCCCEE-------EEEEeeeEEEEEecC
Confidence 35555443443 5666654 4578899988875 468999999988775
No 41
>2l0c_A Putative membrane protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Salmonella enterica subsp}
Probab=22.03 E-value=41 Score=29.28 Aligned_cols=45 Identities=29% Similarity=0.437 Sum_probs=31.7
Q ss_pred eEEEEEEeCCceeee-EEEEEcCCCChhhHHHHHHhhcCCCCCCcCCCCCccccCcEEEEeecC
Q 006162 8 LVFLDVSIDGDPVEK-IVIELFADVVPKTAENFRALCTGEKGIGKSTGKPLHYKGTMFHRIIKG 70 (658)
Q Consensus 8 ~V~fdtsigg~~~Gr-IvIELf~d~APktv~NFl~Lc~g~~g~~~~~~k~~~Y~Gt~F~RVipg 70 (658)
.|+|++.-|+ + |.|.|- ...|-.|+.|+.| .+.|+|+.|.-+.++
T Consensus 39 ~vtFe~~~G~----~~~ef~V~-------~~~Y~~L~eGD~G-------~Lt~QGTRfl~Fer~ 84 (97)
T 2l0c_A 39 EASFKPLNGG----LEKTFRLQ-------AQQYHALTVGDQG-------TLSYKGTRFVGFVSR 84 (97)
T ss_dssp EEEEEETTSC----CCEEEECC-------HHHHTTSCTTCCE-------EEEEETTEEEEEECS
T ss_pred EEEEEECCCC----ccEEEEEC-------HHHCCCCCCCCEE-------EEEEeeeeEEeeecC
Confidence 4666666564 3 555552 4578889988875 468999999887663
Done!