BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006165
(658 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LRZ3|PUM24_ARATH Pumilio homolog 24 OS=Arabidopsis thaliana GN=APUM24 PE=2 SV=1
Length = 641
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/632 (62%), Positives = 496/632 (78%), Gaps = 25/632 (3%)
Query: 27 SKKPKLAGSKPSEVSQSKDFKKPFNPDKRKQKPFKSELQKTDGNKEKNQSLTKRELRLRA 86
SKKPKL + + + K F KP K+ G+KE++ +L+K+E R++A
Sbjct: 28 SKKPKLVSGEQQQHVKPK-FGKP----------------KSAGDKEQSTNLSKKERRVQA 70
Query: 87 KELAEARKKKRKRHYDLELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSH 146
KEL EARKKKRK HY+LE EL SLWEKMR+RNI KE RSKLISEA++KMKGK+PEIA SH
Sbjct: 71 KELTEARKKKRKPHYNLEQELVSLWEKMRRRNIGKEDRSKLISEAIRKMKGKVPEIAVSH 130
Query: 147 VSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISA 206
VSSRVLQTCVK+CSQAE+D +F ELQP FL+LA N YAVH ++KMLD ASK+QLA IS+
Sbjct: 131 VSSRVLQTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQKMLDGASKQQLAACISS 190
Query: 207 LHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLFKNLVSIKESRLVDVI 266
L GHVA LLRH+ GS+VVEHAY LG+A QKQELL ELYSTELQLFK L + E +VD+I
Sbjct: 191 LRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQELLAELYSTELQLFKGLTTSNEKTVVDII 250
Query: 267 SKLGLQKASVLRHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLL 326
+KLGLQK +V RHM ++IQPILEKGI+DH+I H++L+EYL++ADK+SAAD++Q L+G LL
Sbjct: 251 AKLGLQKGAVNRHMTAIIQPILEKGIVDHTITHKLLIEYLTIADKTSAADVLQLLTGSLL 310
Query: 327 VRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIVDDTK 386
+RM+HTRDGS++ ML +KHGSAKERKKIIK MK H+ K+A DQ GSMVL CI SIVDDTK
Sbjct: 311 LRMVHTRDGSRLAMLSIKHGSAKERKKIIKAMKEHVKKMAFDQFGSMVLACIFSIVDDTK 370
Query: 387 LIAKIIIRELQSIIKELVMDKNGRRVLLQLLHPNCSRYLSPDDLSSLNLSIPSLCAKEGS 446
L+ KII+REL++ +K+LVMDKNGRR LLQLLHPN SRYLS DDL++L+LS+PSLC+ + S
Sbjct: 371 LVTKIIVRELEATLKDLVMDKNGRRPLLQLLHPNSSRYLSHDDLAALDLSVPSLCSMDKS 430
Query: 447 EVNSEAKN---NESSKEMADQEVVAVQADESTSPAENLPLAEGGKKDPRVRRQELLVSSG 503
E +S+ K+ NE +E D++ V E + EN+ A GGKKDP VRRQELLV+SG
Sbjct: 431 ETSSKTKDTDGNEIGEETKDEQEDTVA--EHSDHEENVT-AMGGKKDPLVRRQELLVNSG 487
Query: 504 LAESMIDVCIENAGELLRSNFGKEVLYEVAKGGSDDILRPTLDDKLNTLHETIASLASES 563
LAE +IDVC+ENA E L+S FG EV+YEVA GGSD IL P+L +KL L+E I+S+A+E
Sbjct: 488 LAERLIDVCVENAEEFLQSKFGNEVMYEVAIGGSDGILCPSLSEKLCELYEAISSVAAEP 547
Query: 564 KSEASEE--EHVLENFHSSRTIRKLVMDCPKFASTLWKNALKGKSEFWAQGHSCKVVTAF 621
K + SE+ EH+LENFHSSRTIR+LV++ P FAS L+K AL GK WAQGH K+++AF
Sbjct: 548 KPQESEKDSEHILENFHSSRTIRRLVLNRPGFASILFKKALSGKCRSWAQGHCSKILSAF 607
Query: 622 LESSDFKVRELAKTELQPLIDSGSLKIPEAKQ 653
+E+ D +VRE+AKTELQ L++ G+LKI K+
Sbjct: 608 VETEDVQVREMAKTELQVLVNEGTLKISATKK 639
>sp|Q562C7|K0020_RAT Pumilio domain-containing protein KIAA0020 homolog OS=Rattus
norvegicus PE=2 SV=1
Length = 647
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 244/449 (54%), Gaps = 33/449 (7%)
Query: 7 PETNKPVKRIFAKTEPSNPASKKPKLAGSKPSEVSQSKDFKK-PFNPDKRKQKPFKSELQ 65
P+T++ K F K S+ A P+ A + SK+F+K P K++ K FK++ Q
Sbjct: 14 PQTSQG-KNKFHKNSESSSAKAFPRKAAKEGGPKVTSKNFEKGATKPGKKRVKQFKNKPQ 72
Query: 66 KTDGNKEKNQSLTK----RELRLRAKELAEA-------------------RKKKRKRHYD 102
G K+K Q K R+ + K A R+ K +YD
Sbjct: 73 GGKGPKDKFQKANKFNKKRKFQPDGKSDESAAKKPKWDDFKKKKKELKQNRQLSDKTNYD 132
Query: 103 LELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQA 162
+ + +WE +R+++ KE R KL+S+ + ++GKI IA +H S+RV+Q ++Y S+
Sbjct: 133 VVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCLIQYGSEE 192
Query: 163 ERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSV 222
+R FEELQ + L+ Y+ ++VKK L SK Q+A I + GHV +LRH S
Sbjct: 193 QRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRKMLRHSEASA 252
Query: 223 VVEHAYQLGNATQKQELLV-ELYSTELQLFKNLVSIKESRLVDV-ISKLGLQKASVLRHM 280
+VE+AY +++ +L ELY QL+K+ ++++V KL L +L M
Sbjct: 253 IVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLEKVLEVQPGKLEL----ILDEM 308
Query: 281 ASVIQPILEK-GIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKIG 339
++ P+ +K +I HS++H+V +++ + A +++I+ + +V + HT DG+++
Sbjct: 309 KQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSELIEAIR-EAVVYLAHTHDGARVA 367
Query: 340 MLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQSI 399
M C+ HG+ K+RK I+K MK ++ K+A+ Q +VLL +DDTKL+ +III E+ S
Sbjct: 368 MHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSHLVLLAAFDCIDDTKLVKQIIISEVISS 427
Query: 400 IKELVMDKNGRRVLLQLLHPNCSRYLSPD 428
+ +V DK GR+VLL LL P +L P+
Sbjct: 428 LPSIVNDKYGRKVLLYLLSPRAPAHLVPE 456
>sp|Q15397|K0020_HUMAN Pumilio domain-containing protein KIAA0020 OS=Homo sapiens
GN=KIAA0020 PE=1 SV=3
Length = 648
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 287/566 (50%), Gaps = 76/566 (13%)
Query: 91 EARKKKRKRHYDLELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSR 150
++R+ K +YD+ + +WE +R+++ KE R KL+S+ + ++GKI IA +H S+R
Sbjct: 122 QSRQLSDKTNYDIVVRAKQMWEILRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTR 181
Query: 151 VLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGH 210
V+Q ++Y ++ +R FEEL+ + L+ Y+ ++VKK L SK Q+A I + GH
Sbjct: 182 VIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGH 241
Query: 211 VASLLRHMVGSVVVEHAYQLGNATQKQELLV-ELYSTELQLFKNLVSIKESRLVDVISKL 269
V +LRH S +VE+AY +++ +L ELY QL+K+ + R +D + ++
Sbjct: 242 VRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKS----ADHRTLDKVLEV 297
Query: 270 GLQKAS-VLRHMASVIQPILEK-GIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLLV 327
+K ++ M ++ P+ +K +I HS++H+V +++ + A +++I+ + +V
Sbjct: 298 QPEKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSEMIEAIR-EAVV 356
Query: 328 RMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKL 387
+ HT DG+++ M C+ HG+ K+RK I+K MK ++ KVA+ Q +VLL +DDTKL
Sbjct: 357 YLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKL 416
Query: 388 IAKIIIRELQSIIKELVMDKNGRRVLLQLLHPNCSRYLSPDDLSSLNLSIPSLCAKEGSE 447
+ +III E+ S + +V DK GR+VLL L LSP D P+ +E E
Sbjct: 417 VKQIIISEIISSLPSIVNDKYGRKVLLYL--------LSPRD--------PAHTVREIIE 460
Query: 448 VNSEAKNNESSKEMADQEVVAVQADESTSPAENLPLAEGGKKDPRVRRQELLVSSGLAES 507
V + N S KKD VRR+ELL S ++ +
Sbjct: 461 VLQKGDGNAHS-----------------------------KKDTEVRRRELLES--ISPA 489
Query: 508 MIDVCIENAGELLRSNFGKEVLYEVAKGGSDDILRPTLDDKLNTLHETIASLASESKSEA 567
++ E+A E++ ++ ++ + D+ +PT++ IASLA+
Sbjct: 490 LLSYLQEHAQEVVLDKSACVLVSDILGSATGDV-QPTMN--------AIASLAATGLHPG 540
Query: 568 SE--EEHVLENFHSSRTIRKLVMDCPK---------FASTLWKNALKGKSEFWAQ-GHSC 615
+ E H+ E+ ++ L+ K FA TL ++ + WA
Sbjct: 541 GKDGELHIAEHPAGHLVLKWLIEQDKKMKENGREGCFAKTLVEHVGMKNLKSWASVNRGA 600
Query: 616 KVVTAFLESSDFKVRELAKTELQPLI 641
++++ L+S D +V K L+ LI
Sbjct: 601 IILSSLLQSCDLEVANKVKAALKSLI 626
>sp|Q8BKS9|K0020_MOUSE Pumilio domain-containing protein KIAA0020 OS=Mus musculus
GN=Kiaa0020 PE=2 SV=2
Length = 647
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 242/451 (53%), Gaps = 37/451 (8%)
Query: 7 PETNKPVKRIFAKTEPSNPASKKPKLAGSKPSEVSQSKDFKK-PFNPDKRKQKPFKSELQ 65
P+T++ K F K S+ + P+ A + SK+F+K P K+ K FK++ Q
Sbjct: 14 PQTSQG-KNKFHKNSESSSSKTFPRKAVKEGGPKVTSKNFEKGATKPGKKGVKQFKNKPQ 72
Query: 66 KTDGNKEKNQSLTKRELRLRAKELAEA-----------------------RKKKRKRHYD 102
G K+K Q K + + + E+ R+ K +YD
Sbjct: 73 GGKGPKDKFQKANKFSKKRKFQPDGESDESGAKKPKWDDFKKKKKELKQSRQLSDKTNYD 132
Query: 103 LELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQA 162
+ + +WE +R+++ KE R KL+S+ + ++GKI IA +H S+RV+Q ++Y ++
Sbjct: 133 IVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCFIQYGNEE 192
Query: 163 ERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSV 222
+R F+ELQ + L+ Y+ ++VKK L SK Q+A I + GHV +LRH S
Sbjct: 193 QRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRKMLRHSEASA 252
Query: 223 VVEHAYQLGNATQKQELLV-ELYSTELQLFKNLVSIKESRLVDVISKLGLQKAS---VLR 278
+VE+AY +++ +L ELY QL+K+ + +D + L LQ A ++
Sbjct: 253 IVEYAYNDKAILEQRNMLTEELYGNTFQLYKSA----DHPTLDKV--LELQPAKLELIMD 306
Query: 279 HMASVIQPILEK-GIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSK 337
M ++ P+ +K +I HS++H+V +++ + A +++I+ + +V + HT DG++
Sbjct: 307 EMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKPRSELIEAIR-EAVVYLAHTHDGAR 365
Query: 338 IGMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQ 397
+ M C+ HG+ K+RK I+K MK ++ KVA+ Q +VLL +DDTKL+ +III E+
Sbjct: 366 VAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEII 425
Query: 398 SIIKELVMDKNGRRVLLQLLHPNCSRYLSPD 428
S + +V DK GR+VLL L+ P + P+
Sbjct: 426 SSLPSIVNDKYGRKVLLYLMSPRDPAHTVPE 456
>sp|Q9UU76|PUF6_SCHPO Pumilio homology domain family member 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=puf6 PE=1 SV=1
Length = 642
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 149/565 (26%), Positives = 264/565 (46%), Gaps = 90/565 (15%)
Query: 94 KKKRKRHYDLELELASLWEKMRQR-NIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVL 152
+K K D L+ SLW+K+RQ+ +I E R +I+E ++ + ++ H SRV+
Sbjct: 120 RKAMKPFADTSLKAKSLWDKLRQKTSIKAEERKTIIAELFDLIRTNVKQLVFKHDMSRVV 179
Query: 153 QTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVA 212
QTCVK+ S+ +R+ + EL ++ L + Y +L K+ + K + ++G+V
Sbjct: 180 QTCVKFGSKQQRETICAELAGSYVDLCKSPYGKYLAIKIFKYGTPKMKEVILGEMYGNVV 239
Query: 213 SLLRHMVGSVVVEHAY-QLGNATQKQELLVELYSTELQLFKNLVSIKESRLVDV-ISKLG 270
++RH + VVE A+ + N Q++ L+ E Y E Q+FK+ R D+ I KL
Sbjct: 240 KMIRHREAAYVVEDAFREFTNLQQQRALICEFYGPEFQVFKD-------RTQDIHIDKLL 292
Query: 271 L----QKASVLRHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLL 326
+ ++ S+++++ I+ + KG I +++HR ++E+++ AD + A +++ L+ L+
Sbjct: 293 IDHPEKRPSIMQNLWKTIEGSIAKGSIGFTMVHRAMLEFINHADSNEAKELL-NLTKELI 351
Query: 327 VRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIVDDTK 386
+HTRDGS++ M +AK+RK ++K ++ ++ + A D G +V++ + DDT
Sbjct: 352 YEFVHTRDGSQVAMKLFALANAKDRKVMLKSLRPYLIETAKDSYGHLVVVAALDCTDDTI 411
Query: 387 LIAKIIIRELQSIIKELVMDKNGRRVLLQ-LLHPNCSRYLSPDDLSSLNLSIPSLCAKEG 445
+ K++ E + + +L DK RR+LL L+ +RY S ++ L S+ SL AK
Sbjct: 412 MTGKLLQAEFEGELLKLSADKFARRILLYVLVGWEDARYFSKENRELLR-SLDSLKAK-- 468
Query: 446 SEVNSEAKNNESSKEMADQEVVAVQADESTSPAENLPLAEGGKKDPRVRRQELLVSSGLA 505
KKDP VRR EL + G
Sbjct: 469 ----------------------------------------TSKKDPIVRRNELKATIG-- 486
Query: 506 ESMIDVCIENAGELLRSNFGKEVLYEVAKGGSDDILRPTLDDKLNTLHETIASLASESKS 565
+I + + AG+++ + +VL D +L + + E + +
Sbjct: 487 PLLISLISKAAGDMIAESLASQVLV-------DALLYAPCEKE-----EAVDATLKAFDG 534
Query: 566 EASEEEHVLENFHSSRTIRKLVM---------------DCPKFASTLWKNALKGKSEFWA 610
++ H++ H SR ++ LV D K AS L K E WA
Sbjct: 535 NPEQDNHLIHQIHCSRALKTLVQNGHWSGAEKQVVKAEDDLKVASKLIVIIKKYLVE-WA 593
Query: 611 QGHSCKVVTAFLES-SDFKVRELAK 634
G VV A LE+ SD + +E K
Sbjct: 594 SGDGAFVVVAVLEALSDSEKQEFLK 618
>sp|Q04373|PUF6_YEAST Pumilio homology domain family member 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF6 PE=1 SV=1
Length = 656
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 250/506 (49%), Gaps = 58/506 (11%)
Query: 87 KELAEARKKKRKRHYDLELELASLWEKMRQRN--IAKETRSKLISEALQKMKGKIPEIAG 144
++L + RK +RK ++ ++ S+WE++R + + K+ R KL +E + K I ++
Sbjct: 108 RKLLKERKMQRKSGTQVQ-QIKSVWERLRVKTPPLPKQIREKLSNEIWELSKDCISDLVL 166
Query: 145 SHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFI 204
H +SR++QT VKY S+ R+ + + L+ F LA + Y +L+ K+L S+ I
Sbjct: 167 KHDASRIVQTLVKYSSKDRREQIVDALKGKFYVLATSAYGKYLLVKLLHYGSRSSRQTII 226
Query: 205 SALHGHVASLLRHMVGSVVVEHAYQL-GNATQKQELLVELYSTELQLFKNLVSIKESRLV 263
+ LHG + L+RH G+ VVE + L Q+Q+++ E + +E +F+ + +
Sbjct: 227 NELHGSLRKLMRHREGAYVVEDLFVLYATHEQRQQMIKEFWGSEYAVFR---ETHKDLTI 283
Query: 264 DVISKLGLQKASVL-RHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAADIIQQLS 322
+ + + ++K +++ R++ I +EKG I+H + EY+ +A++ +++I+ L
Sbjct: 284 EKVCESSIEKRNIIARNLIGTITASVEKGSTGFQILHAAMREYVKIANEKEISEMIELLH 343
Query: 323 GPLLVRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIV 382
++HT +GS + V +AKERK I+K +K H K+ ++ G++V + I++ V
Sbjct: 344 EQ-FAELVHTPEGSDVACTLVARANAKERKLILKALKNHAEKLIKNEYGNIVFITILNCV 402
Query: 383 DDTKLIAKIIIRELQSIIKELVMDKNGRRVLLQLLHPNCSRYLSPDDLSSLNLSIPSLCA 442
DDT L+ K ++ ++E ++DK GRR L +L +Y SP
Sbjct: 403 DDTVLVFKTFSPTVKEHLQEFIIDKFGRRPWLYILLGLDGKYFSPI-------------- 448
Query: 443 KEGSEVNSEAKNNESSKEMADQEVVAVQADESTSPAENLPLAEGGKKDPRVRRQELLVSS 502
+ ++ + ++ ++TS KKDP RR ELL S
Sbjct: 449 ------------------VKNELLRYIELSKATS-----------KKDPLQRRHELL--S 477
Query: 503 GLAESMIDVCIENAGELLRSNFGKEVLYEVAKGGSDDILRPTLDDK-LNTLHETIASLAS 561
A + ++ +L N G + + EV +D L L++K + + ++ +
Sbjct: 478 KFAPMFLSTISKDYSSILTENLGCQFIAEVL---INDELYAQLNEKDQEKYQQVLNNILT 534
Query: 562 ESKSEASEEEHVLENFHSSRTIRKLV 587
K + +EEEH + S+R ++ L+
Sbjct: 535 TFKGDITEEEHPIHRAFSTRLLKALI 560
>sp|Q09622|PUF12_CAEEL Pumilio domain-containing protein 12 OS=Caenorhabditis elegans
GN=puf-12 PE=4 SV=1
Length = 766
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 193/373 (51%), Gaps = 13/373 (3%)
Query: 64 LQKTDGNKEKNQSLTKRELRLRAKELAEARKKKRKRHYDLELELASLWEKMRQRNIAKET 123
+Q T KE+ ++ ++E + KEL RK + R + LWEK+R K
Sbjct: 211 IQVTKSVKEQLLNMPRKERKAFLKELKLKRKPEGARAQ----KCKELWEKIRMGKTPKAE 266
Query: 124 RSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTY 183
+ + E +KG ++ +H +SRV++ V + + +F EL P + ++ N Y
Sbjct: 267 KDTAVHELYGLVKGHAAKLIYAHDTSRVIECLVATEREGIINNLFNELTPEIVRMSKNVY 326
Query: 184 AVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQ-LGNATQKQELLVE 242
+ VKKML N +K+Q I+A GH +LLR + V+E+AY NA Q+ ++ E
Sbjct: 327 SKFFVKKMLKNGTKEQRDIIINAFRGHAPTLLRIKHAAEVLEYAYNDFANAHQRYNIITE 386
Query: 243 LYSTELQLFK--NLVSIKESRLVDVISKLGLQKASVLRHMASVIQPILEKGIIDHSIIHR 300
Y E LF+ N+ S L +++++ +K +L+H+ VI + EK + SI+H+
Sbjct: 387 FYGKEFILFREDNIRS-----LTEILAEKPEKKVVILKHLDEVIGAVNEKETLRLSILHK 441
Query: 301 VLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKG 360
+++++ D+ +++ L + IHT DG+K+ + + KERK I+K K
Sbjct: 442 LMLDFFDNCDEEKKINLLDSLKDK-IPEFIHTPDGAKLAIKLIWFAPVKERKLIVKNFKD 500
Query: 361 HIGKVAHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQSIIKELVMDKNGRRVLLQLLHPN 420
K A + G VLL + VDDT L+ K+I+ EL + +K+L+ D G +V+ L+HP
Sbjct: 501 LSVKAAMEHYGHRVLLALFDTVDDTVLLNKVIVSELANEMKKLIEDDWGEKVIHYLVHPR 560
Query: 421 CSRYLSPDDLSSL 433
R + +++ L
Sbjct: 561 DGRGIDKREITFL 573
>sp|O61345|PEN_DROME Protein penguin OS=Drosophila melanogaster GN=pen PE=2 SV=1
Length = 737
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 172/340 (50%), Gaps = 10/340 (2%)
Query: 98 KRHYDLELELASLWEKMRQRNIAKETRSKLISEALQ--KMKGKIPEIAGSHVSSRVLQTC 155
K Y++ E + EK+R R E + KL+ + + + I ++ +H ++RV+Q+
Sbjct: 131 KDTYEISKEANQIHEKLRCRRT--ENKDKLVEQIYKVLNVGDTISKVVKAHDTARVIQSM 188
Query: 156 VKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLL 215
+KY S A R + E+L P + + + YA V++ML + A + +L+GH+ L
Sbjct: 189 LKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLA 248
Query: 216 RHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLFKNLVSIKESRLVDVISKLGLQKAS 275
H +GS +++ YQ Q+ + E Y L++ L D + KAS
Sbjct: 249 GHSIGSGLLDSMYQSATPNQRIYMRQEFYG---DLYRKAKDSNVKTLSDTYKEATNMKAS 305
Query: 276 VLRHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAA--DIIQQLSGPLLVRMIHTR 333
+L + + + + K ++D +++H V++EYL D+ + + + L+ M+ T+
Sbjct: 306 ILGSVKANLDHVANKQLVDSALVHAVMLEYLRACDEDEEKLEETVTAFAA-LVPHMLSTK 364
Query: 334 DGSKIGMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKIII 393
+GS+ ++C + K R+ IIK +K H+ K+A+ + G + L+ +++ +DDTK K I
Sbjct: 365 EGSEAAVICFYKSTPKNRRAIIKNIKEHLLKIANHEHGHVFLISLLNALDDTKATKKAIY 424
Query: 394 RELQSIIKELVMDKNGRRVLLQLLHPNCSRYLSPDDLSSL 433
L +K L+ GRRV+ L+ P + P+ + ++
Sbjct: 425 DHLHGDLKALMSSPYGRRVIQWLVAPGDTTCFHPEFIRTV 464
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 146/322 (45%), Gaps = 40/322 (12%)
Query: 132 LQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKM 191
L + G++ E + SR +Q +++CS E+ +VF E+ P L + + ++++K
Sbjct: 626 LSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKF 685
Query: 192 LDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLF 251
+++ + Q + L G + SL M G V++ A ++ + QK EL+ EL L+
Sbjct: 686 IEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCV 745
Query: 252 KN----------LVSIKESRLVDVISKLGLQKASVLRHMAS--VIQPILEKGIID---HS 296
++ + S+ R+ VI+ Q A++ H VIQ ILE D H
Sbjct: 746 RDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHC 805
Query: 297 IIHRVLMEYLSMADKSSAA----------------DIIQQLSGPLLVRMIHTRDGSKIGM 340
II +L ++A II++L+G +V+M + S +
Sbjct: 806 IIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTG-NVVQMSQHKYASNVVE 864
Query: 341 LCVKHGSAKERKKIIKGMKG------HIGKVAHDQCGSMVLLCIVSIVDDTKLIAKIIIR 394
C++H + ER+ +I+ + G H+ + DQ + V+ ++ I D + +I+++
Sbjct: 865 KCLEHADSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQ--REILVQ 922
Query: 395 ELQSIIKELVMDKNGRRVLLQL 416
++ ++ L G+ ++ +
Sbjct: 923 RMKIHLQSLRKYTYGKHIVARF 944
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 144/351 (41%), Gaps = 40/351 (11%)
Query: 103 LELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQA 162
L ++ + R R + ++ + L+++ G I E + SR +Q ++ + A
Sbjct: 817 LRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPA 876
Query: 163 ERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSV 222
ER VF E+ L + + ++++K + S +Q + GHV SL M G
Sbjct: 877 ERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCR 936
Query: 223 VVEHAYQLGNATQKQELLVELYSTELQLFKN----------LVSIKESRLVDVISKLGLQ 272
V++ A + + Q+ E++ EL L+ K+ + ++ L +I Q
Sbjct: 937 VIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQ 996
Query: 273 KASVLRHMAS--VIQPILEKGIIDHSI-----IHR-------------VLMEYLSMADKS 312
++ H VIQ ILE + D ++ +H+ V+ L
Sbjct: 997 VFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPE 1056
Query: 313 SAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKII-------KGMKGHIGKV 365
+ I+ ++ G +LV H + S + CV H S ER +I G + +
Sbjct: 1057 DKSKIVAEIRGNVLVLSQH-KFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTM 1115
Query: 366 AHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQSIIKELVMDKNGRRVLLQL 416
DQ + V+ ++ + + + KI++ +++ I L G+ +L +L
Sbjct: 1116 MKDQYANYVVQKMIDVAEPGQ--RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 144/351 (41%), Gaps = 40/351 (11%)
Query: 103 LELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQA 162
L ++ + R R + ++ + L+++ G I E + SR +Q ++ + A
Sbjct: 817 LRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPA 876
Query: 163 ERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSV 222
ER VF E+ L + + ++++K + S +Q + GHV SL M G
Sbjct: 877 ERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCR 936
Query: 223 VVEHAYQLGNATQKQELLVELYSTELQLFKN----------LVSIKESRLVDVISKLGLQ 272
V++ A + + Q+ E++ EL L+ K+ + ++ L +I Q
Sbjct: 937 VIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQ 996
Query: 273 KASVLRHMAS--VIQPILEKGIIDHSI-----IHR-------------VLMEYLSMADKS 312
++ H VIQ ILE + D ++ +H+ V+ L
Sbjct: 997 VFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPE 1056
Query: 313 SAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKII-------KGMKGHIGKV 365
+ I+ ++ G +LV H + S + CV H S ER +I G + +
Sbjct: 1057 DKSKIVAEIRGNVLVLSQH-KFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTM 1115
Query: 366 AHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQSIIKELVMDKNGRRVLLQL 416
DQ + V+ ++ + + + KI++ +++ I L G+ +L +L
Sbjct: 1116 MKDQYANYVVQKMIDVAEPGQ--RKIVMHKIRPHIATLRKYTYGKHILAKL 1164
>sp|Q9C5E7|PUM6_ARATH Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana GN=APUM6
PE=1 SV=1
Length = 861
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 42/326 (12%)
Query: 132 LQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKM 191
L + G I E + SR +Q ++ C E+ AVF E+ PH L + + ++++K
Sbjct: 530 LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKF 589
Query: 192 LDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLF 251
+ + Q L G + L M G V++ A + Q+ L EL ++
Sbjct: 590 FEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCV 649
Query: 252 KN----------LVSIKESRLVDVISKLGLQKASVLRHMAS--VIQPILEKGIIDHS--I 297
++ + +I ++ ++ Q +S+ H VIQ +LE+ DH
Sbjct: 650 RDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 709
Query: 298 IHRVLMEYLSMADKSSAADIIQQ-----------------LSGPLLVRMIHTRDGSKIGM 340
I ++E + + K + + Q LSG ++ +H + S +
Sbjct: 710 ITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLH-KFASNVIE 768
Query: 341 LCVKHGSAKERKKIIKGMKG------HIGKVAHDQCGSMVLLCIV-SIVDDTKLIAKIII 393
C+++G ER IIK + G + + DQ G+ V+ I + D +L +
Sbjct: 769 KCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLTLFSRV 828
Query: 394 RELQSIIKELVMDKNGRRVLLQLLHP 419
R S +K+ G+ ++ +L P
Sbjct: 829 RMHASALKKYTY---GKHIVSRLEQP 851
>sp|Q80U78|PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2
Length = 1189
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 144/353 (40%), Gaps = 42/353 (11%)
Query: 103 LELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQA 162
L ++ + R R + ++ + L+++ G I E + SR +Q ++ + A
Sbjct: 818 LRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAA 877
Query: 163 ERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSV 222
ER VF E+ L + + ++++K + S +Q + GHV SL M G
Sbjct: 878 ERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCR 937
Query: 223 VVEHAYQLGNATQK--QELLVELYSTELQLFKN----------LVSIKESRLVDVISKLG 270
V++ A + + Q+ E++ EL L+ K+ + ++ L +I
Sbjct: 938 VIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFK 997
Query: 271 LQKASVLRHMAS--VIQPILEKGIIDHSI-----IHR-------------VLMEYLSMAD 310
Q ++ H VIQ ILE + D ++ +H+ V+ L
Sbjct: 998 GQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGR 1057
Query: 311 KSSAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKII-------KGMKGHIG 363
+ I+ ++ G +LV H + S + CV H S ER +I G +
Sbjct: 1058 PEDKSKIVAEIRGNVLVLSQH-KFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALY 1116
Query: 364 KVAHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQSIIKELVMDKNGRRVLLQL 416
+ DQ + V+ ++ + + + KI++ +++ I L G+ +L +L
Sbjct: 1117 TMMKDQYANYVVQKMIDVAEPGQ--RKIVMHKIRPHIATLRKYTYGKHILAKL 1167
>sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1
Length = 972
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 124/293 (42%), Gaps = 40/293 (13%)
Query: 132 LQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKM 191
L ++ G + E + SR +Q ++ + E++ V+EE+ PH L+L + + ++++K
Sbjct: 632 LAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKF 691
Query: 192 LDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLF 251
++ Q L +V L M G V++ A ++ + QK +++ EL ++
Sbjct: 692 FEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCV 751
Query: 252 KN----------LVSIKESRLVDVISKLGLQKASVLRHMAS--VIQPILEKGIIDHSIIH 299
++ + + E + +IS ++ H VIQ +LE D
Sbjct: 752 RDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEH-CHDPDTQS 810
Query: 300 RVL---MEYLSMADKSSAAD-----------------IIQQLSGPLLVRMIHTRDGSKIG 339
+V+ M +SM + + II++L+G +V+M + S +
Sbjct: 811 KVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGK-IVQMSQQKFASNVV 869
Query: 340 MLCVKHGSAKERKKIIKGMKGHIGK------VAHDQCGSMVLLCIVSIVDDTK 386
C+ G +ER+ ++ M G + + DQ + V+ ++ DD +
Sbjct: 870 EKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQ 922
>sp|O94462|PUF3_SCHPO mRNA-binding protein puf3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=puf3 PE=2 SV=4
Length = 732
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 139/294 (47%), Gaps = 18/294 (6%)
Query: 132 LQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEEL-QPHFLSLADNTYAVHLVKK 190
L + G + + SR +Q + ++ ER+AVF+E+ L L + + ++V+K
Sbjct: 394 LSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMMDIFGNYVVQK 453
Query: 191 MLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQL 250
+ ++KQ +S + GHV SL M G VV+ A + + + +L+ EL L
Sbjct: 454 YFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQVQLIQELDGHVLDC 513
Query: 251 F--KNLVSIKESRLVDVISKLGLQKASVLRHMASVIQPILEKGIIDHSIIHRVLMEYLSM 308
+N + + + ++ I LQ +LR + I +L +I R + E+
Sbjct: 514 VCDQNGNHVIQ-KAIECIDTGHLQ--FILRALRPQIH-VLSAHPYGCRVIQRAI-EHCHS 568
Query: 309 ADKSSAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGKVA-H 367
K II++L P ++++ + G+ + ++ GS ++K I M H+ ++ H
Sbjct: 569 ERKL----IIEELL-PHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMIDHLLFLSCH 623
Query: 368 DQCGSMVLLCI--VSIVDDTKLIAKIIIRELQ--SIIKELVMDKNGRRVLLQLL 417
++V CI +S VD +++ KII + + SI+ ++ DK V+ +LL
Sbjct: 624 KFASNVVERCISYISDVDRRRILNKIISEKAENCSILMLMMKDKYANYVIQKLL 677
>sp|Q2VB19|PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1
Length = 1189
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 155/385 (40%), Gaps = 55/385 (14%)
Query: 84 LRAKELAEARKKKRKRHYDLELELASLWEKMRQR----NIAKETRSKLISE--------- 130
+ A AEA+ + L ++L+ R R ++ RS+L+ +
Sbjct: 786 ISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNL 845
Query: 131 ALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKK 190
L+++ G I E + SR +Q ++ + AER VF E+ L + + ++++K
Sbjct: 846 QLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQK 905
Query: 191 MLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQK--QELLVELYSTEL 248
+ S +Q + GHV SL M G V++ A + Q+ E++ EL L
Sbjct: 906 FFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVL 965
Query: 249 QLFKN----------LVSIKESRLVDVISKLGLQKASVLRHMAS--VIQPILEKGIIDHS 296
+ K+ + ++ L +I Q ++ H VIQ ILE + + +
Sbjct: 966 KCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQT 1025
Query: 297 I-----IHR-------------VLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKI 338
+ +H+ V+ L + I+ ++ G +LV H + S +
Sbjct: 1026 LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQH-KFASNV 1084
Query: 339 GMLCVKHGSAKERKKII-------KGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKI 391
CV H S ER +I G + + DQ + V+ ++ + + + KI
Sbjct: 1085 VEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQ--RKI 1142
Query: 392 IIRELQSIIKELVMDKNGRRVLLQL 416
++ +++ I L G+ +L +L
Sbjct: 1143 VMHKIRPHIATLRKYTYGKHILAKL 1167
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF3 PE=1 SV=1
Length = 879
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 132 LQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKM 191
L+ + G E SR +Q + +E++ +F E++ + L+++ + ++++K
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 192 LDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLF 251
+ SK Q + G++ L M V++ A + ++ Q+ EL++EL + LQ+
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQM- 654
Query: 252 KNLVSIKESRLVDVISKLGLQKASVLRHMASVIQPILEKGIIDHSIIHRVLMEYLSMADK 311
IK+ VI QKA I + +E L
Sbjct: 655 -----IKDQNGNHVI-----QKA-----------------------IETIPIEKLPF--- 678
Query: 312 SSAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCG 371
I+ L+G + H+ G ++ ++ GS+++++ I+ +K I + DQ G
Sbjct: 679 -----ILSSLTGHIYHLSTHSY-GCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYG 732
Query: 372 SMVLLCIV 379
+ V+ ++
Sbjct: 733 NYVIQYVL 740
>sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2
Length = 1066
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/125 (18%), Positives = 60/125 (48%)
Query: 126 KLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAV 185
++ISE ++++ G + + + V+Q C++ + + + L+ + Y
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 186 HLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYS 245
+++++L++ + +Q + LH H L++ G+ V++H + G K +++ E+
Sbjct: 888 RVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRG 947
Query: 246 TELQL 250
L L
Sbjct: 948 KVLAL 952
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 151/385 (39%), Gaps = 55/385 (14%)
Query: 84 LRAKELAEARKKKRKRHYDLELELASLWEKMRQR----NIAKETRSKLISE--------- 130
+ A AEA+ + L + L+ R R +I RS+L+ +
Sbjct: 663 ISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFPNL 722
Query: 131 ALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKK 190
L+ + G I E + SR +Q ++ + AER VF E+ L + + ++++K
Sbjct: 723 QLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQK 782
Query: 191 MLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQK--QELLVELYSTEL 248
+ S Q + + GHV L M G V++ A + ++ Q+ E++ EL L
Sbjct: 783 FFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVL 842
Query: 249 QLFKN----------LVSIKESRLVDVISKLGLQKASVLRHMAS--VIQPILEKGIIDHS 296
+ K+ + ++ L +I Q + H VIQ ILE + +
Sbjct: 843 KCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQT 902
Query: 297 I-----IHR-------------VLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKI 338
+ +H+ V+ L + I+ ++ G +L H + S +
Sbjct: 903 LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQH-KFASNV 961
Query: 339 GMLCVKHGSAKERKKII-------KGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKI 391
CV H S ER +I G + + DQ + V+ ++ + + + KI
Sbjct: 962 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ--RKI 1019
Query: 392 IIRELQSIIKELVMDKNGRRVLLQL 416
I+ +++ I L G+ +L +L
Sbjct: 1020 IMHKIRPHITTLRKYTYGKHILAKL 1044
>sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2
Length = 1066
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/125 (18%), Positives = 60/125 (48%)
Query: 126 KLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAV 185
++ISE ++++ G + + + V+Q C++ + + + L+ + Y
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 186 HLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYS 245
+++++L++ + +Q + LH H L++ G+ V++H + G K +++ E+
Sbjct: 888 RVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRG 947
Query: 246 TELQL 250
L L
Sbjct: 948 KVLAL 952
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 151/385 (39%), Gaps = 55/385 (14%)
Query: 84 LRAKELAEARKKKRKRHYDLELELASLWEKMRQR----NIAKETRSKLISE--------- 130
+ A AEA+ + L + L+ R R +I RS+L+ +
Sbjct: 663 ISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFPNL 722
Query: 131 ALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKK 190
L+ + G I E + SR +Q ++ + AER VF E+ L + + ++++K
Sbjct: 723 QLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQK 782
Query: 191 MLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQK--QELLVELYSTEL 248
+ S Q + + GHV L M G V++ A + ++ Q+ E++ EL L
Sbjct: 783 FFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVL 842
Query: 249 QLFKN----------LVSIKESRLVDVISKLGLQKASVLRHMAS--VIQPILEKGIIDHS 296
+ K+ + ++ L +I Q + H VIQ ILE + +
Sbjct: 843 KCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQT 902
Query: 297 I-----IHR-------------VLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKI 338
+ +H+ V+ L + I+ ++ G +L H + S +
Sbjct: 903 LPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQH-KFASNV 961
Query: 339 GMLCVKHGSAKERKKII-------KGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKI 391
CV H S ER +I G + + DQ + V+ ++ + + + KI
Sbjct: 962 VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQ--RKI 1019
Query: 392 IIRELQSIIKELVMDKNGRRVLLQL 416
I+ +++ I L G+ +L +L
Sbjct: 1020 IMHKIRPHITTLRKYTYGKHILAKL 1044
>sp|A5DWG1|NOP9_LODEL Nucleolar protein 9 OS=Lodderomyces elongisporus (strain ATCC 11503
/ CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
GN=NOP9 PE=3 SV=1
Length = 716
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
E R+ IS L++ +GK ++ + + S++++ + + ++ A+FE HF SLA +
Sbjct: 73 EERNGFISSVLEEAQGKELKLVTNQICSKLMERLILFADSSQLKAIFETFSGHFASLAFH 132
Query: 182 TYAVHLVKKMLDNAS 196
Y+ H+++ L A+
Sbjct: 133 KYSSHVLETFLVRAA 147
Score = 32.7 bits (73), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%)
Query: 166 AVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVE 225
+V EE Q L L N L+++++ A QL GH ASL H S V+E
Sbjct: 81 SVLEEAQGKELKLVTNQICSKLMERLILFADSSQLKAIFETFSGHFASLAFHKYSSHVLE 140
>sp|B9W7H9|NOP9_CANDC Nucleolar protein 9 OS=Candida dubliniensis (strain CD36 / ATCC
MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=NOP9
PE=3 SV=1
Length = 710
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 45/73 (61%)
Query: 120 AKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLA 179
++E R I+ L++ +GK ++ + + S++++ + + + + +F++ Q HF+SLA
Sbjct: 76 SEEERQGFINSVLEEAQGKELKLVTNQICSKLMERLILFANYNQLKKIFKQFQNHFVSLA 135
Query: 180 DNTYAVHLVKKML 192
+ YA H+++ +L
Sbjct: 136 FHKYASHVLETLL 148
>sp|C4YEN2|NOP9_CANAW Nucleolar protein 9 OS=Candida albicans (strain WO-1) GN=NOP9 PE=3
SV=1
Length = 715
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 42/71 (59%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
E R I+ L + +GK ++ + + S++++ + + + + +F++ Q HF+SLA +
Sbjct: 83 EERQGFINSVLDEAQGKELKLVTNQICSKLMERLILFANHNQLKKIFKQFQNHFVSLAFH 142
Query: 182 TYAVHLVKKML 192
YA H+++ +L
Sbjct: 143 KYASHVLETLL 153
>sp|P25822|PUM_DROME Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2
Length = 1533
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 134 KMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLD 193
++KG + ++A RV+Q ++ S ++ + EL H L + H+V+K ++
Sbjct: 1183 QVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE 1242
Query: 194 NASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLFKN 253
L I+A G V SL H G V++ + A Q +L EL+ QL ++
Sbjct: 1243 CVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQD 1302
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 38/297 (12%)
Query: 132 LQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKM 191
L+ + I E + SR +Q ++ + AE+ VF E+ SL + + ++++K
Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKF 1168
Query: 192 LDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLF 251
+ + +Q + GHV L M G V++ A + + Q+QE++ EL L+
Sbjct: 1169 FEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCV 1228
Query: 252 K----NLVSIKESRLVD------VISKLGLQKASVLRHMAS--VIQPILE---------- 289
K N V K VD +I+ Q S+ H VIQ ILE
Sbjct: 1229 KDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPI 1288
Query: 290 --------KGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKIGML 341
+ +I + V+ L + + +I + G +LV H + S +
Sbjct: 1289 LDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQH-KFASNVVEK 1347
Query: 342 CVKHGSAKERKKIIKGMKGHIGKVAH----DQCGSMVLLCIVSIVDDT---KLIAKI 391
CV H + ER +I + H DQ + V+ ++ + + T KL+ KI
Sbjct: 1348 CVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKI 1404
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 16/108 (14%)
Query: 121 KETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLAD 180
+E +S LI+ ++GK+ ++ +S V++ CV + ++ ER + +E+ + D
Sbjct: 1318 QEDKSILINS----VRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEV----CTFND 1369
Query: 181 NT--------YAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVG 220
N YA ++V+KM+D + QL ++ + H+A+L ++ G
Sbjct: 1370 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG 1417
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/111 (18%), Positives = 50/111 (45%)
Query: 130 EALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVK 189
E + ++ G + + + V+Q C++ + + SL+ + Y +++
Sbjct: 1215 EIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQ 1274
Query: 190 KMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELL 240
++L++ + +Q + LH H L++ G+ V++H + G K L+
Sbjct: 1275 RILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILI 1325
>sp|Q9SS47|PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis thaliana GN=APUM4 PE=1 SV=2
Length = 1003
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 117/276 (42%), Gaps = 24/276 (8%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
E ++ + E L + + ++ G++V +Q ++ + +R + E++ H L+L+
Sbjct: 692 EEKNAIFPEILPYGRTLMTDVFGNYV----IQKFFEHGTTKQRKELAEQVTGHVLALSLQ 747
Query: 182 TYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLV 241
Y +++K L+ +Q A + L G V + G+ V++ + Q ++
Sbjct: 748 MYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIIS 807
Query: 242 ELYSTELQLFKNLVSIKE-SRLVDVISKLGLQK---ASVLRHMASVIQPILEKGIIDHSI 297
Y L L + + R+++ I + Q+ ++ + ++ Q +I H I
Sbjct: 808 SFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHII 867
Query: 298 IHRVLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKIIKG 357
H ++II +L+G +V+M + S + C+ G +ER+ ++
Sbjct: 868 QH---------GKPHERSEIINKLAGQ-IVKMSQQKFASNVVEKCLTFGGPEERQVLVNE 917
Query: 358 MKGHIGK------VAHDQCGSMVLLCIVSIVDDTKL 387
M G+ + + D G+ V+ ++ DD L
Sbjct: 918 MLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSL 953
>sp|Q92347|NOP9_SCHPO Nucleolar protein 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nop9 PE=3 SV=1
Length = 655
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 165 DAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVV 224
D+++ E+Q L + +N + +++K+ ++ +Q+ F SAL+GH L++ GS
Sbjct: 91 DSIYREVQGKELIVCNNVFGSKVLEKLFPLSTSRQIKSFFSALNGHYVELIQTTFGSYAF 150
Query: 225 E 225
E
Sbjct: 151 E 151
>sp|C3LSI3|FADB_VIBCM Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain M66-2) GN=fadB PE=3 SV=1
Length = 723
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 111 WEKMRQRNIAKETRSKLISEALQKM---KGKIPEIAGSHVSSRVLQTC-VKYCSQAERDA 166
W+K RQ+ + T SKL EA+ KG + ++AG H + + ++ ++ RDA
Sbjct: 211 WQKRRQQKTSALTLSKL--EAMMSFTMAKGMVAQVAGKHYPAPMTSVVTIEEAARLPRDA 268
Query: 167 VFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLA 201
+ + HF+ LA +T A LV L++ K LA
Sbjct: 269 ALDIERKHFIKLAKSTEAQALVGIFLNDQYIKGLA 303
>sp|Q9KNI1|FADB_VIBCH Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=fadB PE=3 SV=1
Length = 723
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 111 WEKMRQRNIAKETRSKLISEALQKM---KGKIPEIAGSHVSSRVLQTC-VKYCSQAERDA 166
W+K RQ+ + T SKL EA+ KG + ++AG H + + ++ ++ RDA
Sbjct: 211 WQKRRQQKTSALTLSKL--EAMMSFTMAKGMVAQVAGKHYPAPMTSVVTIEEAARLPRDA 268
Query: 167 VFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLA 201
+ + HF+ LA +T A LV L++ K LA
Sbjct: 269 ALDIERKHFIKLAKSTEAQALVGIFLNDQYIKGLA 303
>sp|A5F465|FADB_VIBC3 Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae
serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
GN=fadB PE=3 SV=1
Length = 723
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 111 WEKMRQRNIAKETRSKLISEALQKM---KGKIPEIAGSHVSSRVLQTC-VKYCSQAERDA 166
W+K RQ+ + T SKL EA+ KG + ++AG H + + ++ ++ RDA
Sbjct: 211 WQKRRQQKTSALTLSKL--EAMMSFTMAKGMVAQVAGKHYPAPMTSVVTIEEAARLPRDA 268
Query: 167 VFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLA 201
+ + HF+ LA +T A LV L++ K LA
Sbjct: 269 ALDIERKHFIKLAKSTEAQALVGIFLNDQYIKGLA 303
>sp|A7TH34|NOP9_VANPO Nucleolar protein 9 OS=Vanderwaltozyma polyspora (strain ATCC 22028
/ DSM 70294) GN=NOP9 PE=3 SV=1
Length = 677
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 42/73 (57%)
Query: 120 AKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLA 179
+ E +S++++ LQ+ KGK ++ S + S++++ + C + +VF+ F +L+
Sbjct: 80 SSEEKSQMVTNVLQEAKGKELKLVTSQICSKLMERIILECDDMQLKSVFKAFNGFFYNLS 139
Query: 180 DNTYAVHLVKKML 192
+ YA H+++ +
Sbjct: 140 CHKYASHVLETLF 152
>sp|Q9N4H4|PME1_CAEEL Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans
GN=pme-1 PE=2 SV=1
Length = 945
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 20 TEPSNPASKKPKLAGSKPSEVSQSKDFKKPFNPDKRKQKPFKSELQKTDG--NKEKNQSL 77
TEP+ PAS P P E +++ +P+ ++P SE+ + DG N ++N
Sbjct: 198 TEPATPASASPT-----PPE-AETPVLSAEGSPESSNKRPASSEIIEIDGEGNPDENDFA 251
Query: 78 TKRELRLRAKELAEARKKKRKRHYDLELELASLWEKM 114
KR ++ A+ L E +KK+ K+ DL E ++E+M
Sbjct: 252 KKRRMKKEAR-LMEVQKKRMKKQSDLLWEYRQIFERM 287
>sp|C5MFB4|NOP9_CANTT Nucleolar protein 9 OS=Candida tropicalis (strain ATCC MYA-3404 /
T1) GN=NOP9 PE=3 SV=1
Length = 705
Score = 40.4 bits (93), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 43/73 (58%)
Query: 120 AKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLA 179
+ E R I+ L++ +GK ++ + + S++++ + + + + +F++ HF+SLA
Sbjct: 72 SDEDRQGFINSVLEEAQGKELKLVTNQICSKLMERLILFANNKQLKKIFKQFSNHFVSLA 131
Query: 180 DNTYAVHLVKKML 192
+ Y+ H+++ +L
Sbjct: 132 FHKYSSHVLETLL 144
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 40.0 bits (92), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 99/247 (40%), Gaps = 56/247 (22%)
Query: 150 RVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHG 209
RV+Q ++ ++ + +EL H + + H+V+K ++ ++ + IS G
Sbjct: 714 RVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFG 773
Query: 210 HVASLLRHMVGSVVV----EHAYQLGNATQKQELLVELYSTELQLFKNLVSIKESRLVDV 265
HV +L H G V+ EH + N + +++ E+ ST L ++
Sbjct: 774 HVVTLSTHPYGCRVIQRVLEHCH---NPDTQSKVMEEILSTVSMLTQD------------ 818
Query: 266 ISKLGLQKASVLRHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPL 325
++ V+Q +LE G D + II++L+G
Sbjct: 819 ------------QYGNYVVQHVLEHGKPDERTV------------------IIKELAGK- 847
Query: 326 LVRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGK------VAHDQCGSMVLLCIV 379
+V+M + S + C+ G +ER+ ++ M G + + DQ + V+ ++
Sbjct: 848 IVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVL 907
Query: 380 SIVDDTK 386
DD +
Sbjct: 908 ETCDDQQ 914
>sp|C7YQ16|NOP9_NECH7 Nucleolar protein 9 OS=Nectria haematococca (strain 77-13-4 / ATCC
MYA-4622 / FGSC 9596 / MPVI) GN=NOP9 PE=3 SV=1
Length = 743
Score = 40.0 bits (92), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
E R + ++ + K ++A S SR+++ ++ + A++ +FE HFLSL +
Sbjct: 88 EERDVFLENVWKEAENKELKLASSQSCSRLMERLIQLSTTAQKKRLFEAFAGHFLSLVQH 147
Query: 182 TYAVHLVKKMLDNAS---KKQLAGFIS 205
+A H + + ++ K+L+GF+
Sbjct: 148 RFASHCCEALFLRSAGVVTKELSGFVG 174
>sp|Q6BRH3|NOP9_DEBHA Nucleolar protein 9 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NOP9 PE=3
SV=2
Length = 720
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 42/75 (56%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
E R I L++ +GK ++ + + S++++ V + + + +F + HF++LA +
Sbjct: 78 EEREGFIRSVLEEARGKELKLVTNQICSKLMERLVLFATDRQLKNIFRQFSGHFVALAHH 137
Query: 182 TYAVHLVKKMLDNAS 196
Y+ H+++ +L A+
Sbjct: 138 KYSSHVLETLLVRAA 152
>sp|A3LXG0|NOP9_PICST Nucleolar protein 9 OS=Scheffersomyces stipitis (strain ATCC 58785
/ CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=NOP9 PE=3
SV=1
Length = 711
Score = 39.7 bits (91), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 41/73 (56%)
Query: 120 AKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLA 179
+ E R I L++ +GK ++ + + S++++ + + S + +F + HF++LA
Sbjct: 77 SDEDREGFIRSVLEEARGKELKLVTNQICSKLMERLILFASDRQLKNIFGQFSGHFVALA 136
Query: 180 DNTYAVHLVKKML 192
+ Y+ H+++ +L
Sbjct: 137 HHKYSSHVLETLL 149
>sp|Q09829|YAD3_SCHPO Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.03c PE=4 SV=1
Length = 780
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 109/229 (47%), Gaps = 17/229 (7%)
Query: 116 QRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHF 175
Q I K T ++ IS L+ + + +A + + VLQ C+ + + +F ++ +
Sbjct: 553 QNIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENL 612
Query: 176 LSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQ 235
++LA N + ++++ LD + ++++ L+++ G+ +V+H +L N
Sbjct: 613 ITLATNRHGCCILQRCLDRTNGDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLEL-NIQP 671
Query: 236 KQELLVELYSTELQLFKNLVSIKESRLVDVISKLGLQKAS------VLRHMASVIQPILE 289
E ++E + F N+ + + + ++ AS +L+ S P +E
Sbjct: 672 YTERIIE------KFFGNICKLSLQKFSSNAIEQCIRTASPSTREQMLQEFLSF--PNIE 723
Query: 290 KGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKI 338
+ ++D + V+ +L++AD+S I++ +S ++ ++ +TR G I
Sbjct: 724 Q-LLDDCYANYVMQRFLNVADESQKFLILRSISH-VIPKIQNTRHGRHI 770
>sp|Q0U154|NOP9_PHANO Nucleolar protein 9 OS=Phaeosphaeria nodorum (strain SN15 / ATCC
MYA-4574 / FGSC 10173) GN=NOP9 PE=3 SV=1
Length = 726
Score = 39.3 bits (90), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 270 GLQKASVLRHMASVIQPILEKGIIDHSI--IHRVLMEYLSMADKSSAADII----QQLSG 323
G + +LR S + + + G DHS +H L+ MA D+I +L+
Sbjct: 463 GFEVTRILRVSESPAENLKQNGKQDHSPEKVHGSLLAQTMMAVDGPLGDLIFDSLAKLTP 522
Query: 324 PLLVRMIHTRDGSKI--GMLCVKHGSAKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSI 381
L V++ S+ L +H S R+K+I+ GH+G++A D S V+ +
Sbjct: 523 ELSVQLARDPTASRTLQAALTAEHASVIFRRKMIQQFYGHVGELALDPAASRVIDAVWHG 582
Query: 382 VDDTKLIAKIIIREL 396
I + I EL
Sbjct: 583 THGLAFIRERIAEEL 597
>sp|Q75C70|NOP9_ASHGO Nucleolar protein 9 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=NOP9 PE=3 SV=2
Length = 678
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 42/71 (59%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
+ + + I+ +++ KGK ++A S + S++++ + + A+F+ + F++L+ N
Sbjct: 79 DEKYQFINSVIEESKGKELKLATSQICSKLMERIILAADDQQLKAIFQGINGFFVNLSYN 138
Query: 182 TYAVHLVKKML 192
YA H+V+ +L
Sbjct: 139 KYASHVVETLL 149
>sp|Q92359|YDHE_SCHPO Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G9.14 PE=4 SV=1
Length = 681
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 141 EIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQL 200
++ G+HV +Q C+ SQ + +F+ + L ++ + + +V++ D+AS Q+
Sbjct: 463 DLNGNHV----IQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQI 518
Query: 201 AGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELL 240
+ + H +L++ G+ V+++ +L N + ++
Sbjct: 519 EQLVEHIVPHALTLVQDAFGNYVLQYVLELNNPNHTEAII 558
>sp|E5A2Z3|NOP9_LEPMJ Nucleolar protein 9 OS=Leptosphaeria maculans (strain JN3 / isolate
v23.1.3 / race Av1-4-5-6-7-8) GN=NOP9 PE=3 SV=1
Length = 712
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 115 RQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPH 174
R + + R++ + ++ +GK +IA S SRVL+ + + + +FE+ H
Sbjct: 88 RNEFASPDERAQWLKNVFKEAEGKELKIANSQSCSRVLERLILLSTPGQLKNIFEKFNGH 147
Query: 175 FLSLADNTYAVHLVKKMLDNAS 196
FL+L + +A H + + A+
Sbjct: 148 FLNLVQHRFASHCCEALFLQAA 169
>sp|Q7S5H0|NOP9_NEUCR Nucleolar protein 9 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nop9
PE=3 SV=1
Length = 775
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 99 RHYDLELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKY 158
RH D LEL + E R + ++M+GK ++A S SR+++ +
Sbjct: 98 RHADELLELNDF--------PSAEERDIFLQNVYKEMRGKELKLASSQSCSRLMERLILL 149
Query: 159 CSQAERDAVFEELQPHFLSLADNTYAVHLVKKML 192
+ ++ ++F+ HF+SL + +A H +K+
Sbjct: 150 SNTRQKKSLFDAFGGHFISLVTHRFASHCCEKLF 183
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 54/246 (21%)
Query: 150 RVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHG 209
RV+Q ++ ++ + +EL H + + H+V+K ++ ++ + IS G
Sbjct: 718 RVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFG 777
Query: 210 HVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLFKNLVSIKESRLVDVISKL 269
HV +L H G V+ Q +L + + Q S++++ I
Sbjct: 778 HVVTLSTHPYGCRVI------------QRVLEHCHDPDTQ----------SKVMEEI--- 812
Query: 270 GLQKASVL---RHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLL 326
L S+L ++ V+Q +LE G D + II++L+G +
Sbjct: 813 -LSTVSMLAQDQYGNYVVQHVLEHGKPDERTV------------------IIKELAGK-I 852
Query: 327 VRMIHTRDGSKIGMLCVKHGSAKERKKIIKGMKGHIGK------VAHDQCGSMVLLCIVS 380
V+M + S + C+ G +ER+ ++ M G + + DQ + V+ ++
Sbjct: 853 VQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLE 912
Query: 381 IVDDTK 386
DD +
Sbjct: 913 TCDDQQ 918
>sp|B2AL40|NOP9_PODAN Nucleolar protein 9 OS=Podospora anserina (strain S / ATCC MYA-4624
/ DSM 980 / FGSC 10383) GN=NOP9 PE=3 SV=1
Length = 834
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 99 RHYDLELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKY 158
RH D LEL ++E ++ ++ ++ KGK ++A S SR+++ +
Sbjct: 118 RHADELLELNDF--------PSEEEKTIFLANVYKEAKGKELKLASSQSCSRLMERLILL 169
Query: 159 CSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNAS---KKQLAG 202
+ ++ ++F+ HF+SL + +A H +K+ ++ ++LAG
Sbjct: 170 SNTKQKKSMFDAFSGHFISLVTHRFASHCCEKLFLQSAPVVTQELAG 216
>sp|D1ZSG5|NOP9_SORMK Nucleolar protein 9 OS=Sordaria macrospora (strain ATCC MYA-333 /
DSM 997 / K(L3346) / K-hell) GN=NOP9 PE=3 SV=1
Length = 761
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 99 RHYDLELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKY 158
RH D LEL + E R + ++++GK ++A S SR+++ +
Sbjct: 102 RHADELLELNDF--------PSTEERDIFLQNVYKELRGKELKVASSQSCSRLMERLILL 153
Query: 159 CSQAERDAVFEELQPHFLSLADNTYAVHLVKKML 192
+ ++ ++F+ HF+SL + +A H +K+
Sbjct: 154 SNTRQKKSLFDAFGGHFISLVTHRFASHCCEKLF 187
>sp|A5DBF4|NOP9_PICGU Nucleolar protein 9 OS=Meyerozyma guilliermondii (strain ATCC 6260
/ CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL
Y-324) GN=NOP9 PE=3 SV=2
Length = 697
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 40/73 (54%)
Query: 120 AKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLA 179
+ E R I+ L + GK ++ + + S++++ + + + ++F+ HF+SLA
Sbjct: 91 STEERDAFINSVLDEASGKELKLVTNQICSKLMERIILFGGDQQLISIFKSFSNHFVSLA 150
Query: 180 DNTYAVHLVKKML 192
+ Y+ H+++ +L
Sbjct: 151 HHKYSSHVLETLL 163
>sp|B6Q5P5|NOP9_PENMQ Nucleolar protein 9 OS=Penicillium marneffei (strain ATCC 18224 /
CBS 334.59 / QM 7333) GN=nop9 PE=3 SV=1
Length = 697
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
E +S + ++ KGK +IA S SR+L+ + S +R +F + HFL+L +
Sbjct: 101 EEQSIFVESVYEEAKGKELKIACSQSCSRLLEKIISLSSTDQRRRLFGKFLGHFLNLVQH 160
Query: 182 TYAVHLVKKML-----------DNASKKQL 200
+A H + + NA KKQ+
Sbjct: 161 RFASHCCETLFVKVAPALSHKTHNAPKKQI 190
>sp|C4R8S9|NOP9_PICPG Nucleolar protein 9 OS=Komagataella pastoris (strain GS115 / ATCC
20864) GN=NOP9 PE=3 SV=1
Length = 645
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 166 AVFEELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVE 225
+VFEE + L L N L+++++ N S +Q+ A +GH SL H S V+E
Sbjct: 79 SVFEEAKGKELKLVTNQICSKLMERLILNGSDRQVKRLFKAFNGHFLSLAVHKYSSHVLE 138
Query: 226 HAYQLGNATQKQELL 240
+ + + ELL
Sbjct: 139 TLFIRSASVIENELL 153
Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 38/71 (53%)
Query: 122 ETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADN 181
E R +S ++ KGK ++ + + S++++ + S + +F+ HFLSLA +
Sbjct: 71 EERQGFVSSVFEEAKGKELKLVTNQICSKLMERLILNGSDRQVKRLFKAFNGHFLSLAVH 130
Query: 182 TYAVHLVKKML 192
Y+ H+++ +
Sbjct: 131 KYSSHVLETLF 141
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 138 KIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASK 197
++ +++ H+ + V+Q YCS ++ + E + PH + + +K++D AS
Sbjct: 777 EVSDLSSDHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVAST 836
Query: 198 K-QLAGFISALHGHVASLLRHMVGSVVVEHAYQLG 231
+ Q+ L ++ L G+ VV+ + G
Sbjct: 837 EAQMRLIAKHLQPYIPLLFADQFGNYVVQTCLKFG 871
>sp|D4AMF9|NOP9_ARTBC Nucleolar protein 9 OS=Arthroderma benhamiae (strain ATCC MYA-4681
/ CBS 112371) GN=NOP9 PE=3 SV=1
Length = 716
Score = 36.6 bits (83), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 127 LISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVH 186
I + KGK +IA S SR+++ + + A+ A+FE+ HFL L + +A H
Sbjct: 103 FIESVYTEAKGKELKIACSQSCSRLMEKLIAMSTPAQVKALFEKFSGHFLHLVQHRFASH 162
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 36.6 bits (83), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 110 LWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFE 169
+W+K+ + E +++ ++GK E+A S V+Q + C + ++ E
Sbjct: 486 VWQKLFETQWY-EYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNMFENCVEKDKRECIE 544
Query: 170 ELQPHFLSLADNTYAVHLVKKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQ 229
E+ H +A + +V+ M++N + L I AL S V+E A +
Sbjct: 545 EIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRAVEFSIDQFASKVIEKAIK 604
Query: 230 LG 231
G
Sbjct: 605 SG 606
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 225,971,522
Number of Sequences: 539616
Number of extensions: 9052344
Number of successful extensions: 33880
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 369
Number of HSP's that attempted gapping in prelim test: 32205
Number of HSP's gapped (non-prelim): 1531
length of query: 658
length of database: 191,569,459
effective HSP length: 124
effective length of query: 534
effective length of database: 124,657,075
effective search space: 66566878050
effective search space used: 66566878050
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)