Query 006165
Match_columns 658
No_of_seqs 307 out of 1521
Neff 7.3
Searched_HMMs 13730
Date Mon Mar 25 17:44:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006165.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006165hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1m8za_ a.118.1.8 (A:) Pumilio 100.0 1.4E-40 1E-44 352.3 25.3 292 109-418 4-303 (339)
2 d1m8za_ a.118.1.8 (A:) Pumilio 100.0 2.3E-35 1.6E-39 312.1 24.8 285 118-416 45-337 (339)
3 d2yvxa1 a.118.26.1 (A:7-131) M 19.7 33 0.0024 27.5 3.3 53 191-243 42-94 (125)
4 d2nsza1 a.118.1.14 (A:322-450) 15.6 2.2E+02 0.016 22.6 7.7 23 300-322 12-34 (129)
5 d1deeg_ a.8.1.1 (G:) Immunoglo 13.3 1.4E+02 0.01 19.9 4.4 26 107-132 3-28 (51)
6 d1t95a1 a.5.8.1 (A:87-161) Hyp 8.5 1.2E+02 0.0086 22.2 3.1 31 118-148 6-36 (75)
7 d2fgea2 d.185.1.1 (A:798-993) 7.6 3.2E+02 0.024 22.5 6.5 66 103-171 83-148 (196)
8 d1vi0a2 a.121.1.1 (A:78-194) H 7.1 2.2E+02 0.016 21.2 4.5 32 136-167 11-42 (117)
9 d1ivsa2 a.27.1.1 (A:579-796) V 6.8 5.8E+02 0.042 21.3 8.0 25 204-229 90-114 (218)
10 d1okra_ a.4.5.39 (A:) Methicil 6.4 4.5E+02 0.033 19.8 6.3 64 574-637 37-117 (120)
No 1
>d1m8za_ a.118.1.8 (A:) Pumilio 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.4e-40 Score=352.33 Aligned_cols=292 Identities=19% Similarity=0.293 Sum_probs=260.4
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHhchHHHhhccCCccHHHHHhhhhCCHHHHHHHHHHHHHHHHHhhcccchhHHH
Q 006165 109 SLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLV 188 (658)
Q Consensus 109 ~iwE~lr~k~~~~eeR~~lv~~l~~~ikg~i~~la~~~~gSRvlQ~lLk~gs~eqr~~I~~eL~~~~~~L~~d~yg~~vV 188 (658)
++||.+|....+.-+ +++++|++.++|++|+|||+||++|++|++++|+.||++|.|++.+||.|+||||||
T Consensus 4 ~~~~~~~~~~~~~~~--------l~~~~g~~~~~~~~q~gSr~lQ~~l~~~~~~~~~~I~~~l~~~~~~L~~~~~gn~vv 75 (339)
T d1m8za_ 4 RLLEDFRNNRYPNLQ--------LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVI 75 (339)
T ss_dssp HHHHHHHTTCCTTCC--------GGGGTTCHHHHHTSHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHH
T ss_pred hHhHHhhcCCCCCCc--------HHHHHhHHHHHhcCchhhHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhhCcccchhH
Confidence 689999876533211 467799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhHHHHhhccccchHHHHHHhhCCHHHHHHHHHHHHHhHHhhhcccCCCchhHHHHHHhh
Q 006165 189 KKMLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLFKNLVSIKESRLVDVISK 268 (658)
Q Consensus 189 qKLl~~~s~eqr~~Ii~~~~g~v~~L~~h~~Gs~Vvq~l~~~a~~~qr~~li~e~~g~~~~l~~d~~g~~~~~L~~il~~ 268 (658)
|+||++++++++..|++.+.|++..|+.|+||++|||++++.++..++..++++|++....++.|..| ...+..+++.
T Consensus 76 qkll~~~~~~~~~~i~~~l~~~~~~L~~~~~gs~Vvq~l~~~~~~~~~~~l~~el~~~~~~l~~d~~~--~~v~~~~l~~ 153 (339)
T d1m8za_ 76 QKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNG--NHVVQKCIEC 153 (339)
T ss_dssp HHHHHHSCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHHSTTH--HHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHHhhHHHHhcccccchHHHhhhccCCHHHHHHHHHHHhhhhHHHhcCCCc--chHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 6677788874
Q ss_pred -hhhhHHHHHHhHHHHHHHHHhcCCCchhHHHHHHHHHHhhCChhHHHHHHHhcchhhHHHhhcCcchhHHHHHHHhhCC
Q 006165 269 -LGLQKASVLRHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGS 347 (658)
Q Consensus 269 -~~~kr~~il~~~~~~iq~ileK~~~~~~lvh~~l~ey~~~~~~~~~~elI~~L~~~~l~~L~~tk~GS~Vv~~~L~~~~ 347 (658)
.|..+..|+..+...+..+.. +...+.++..++..++++.+..+++.+.+. +..|+++++|++|++.+|.+++
T Consensus 154 ~~~~~~~~i~~~~~~~~~~l~~-----~~~g~~vlq~~l~~~~~~~~~~l~~~l~~~-~~~L~~~~~G~~vvq~~l~~~~ 227 (339)
T d1m8za_ 154 VQPQSLQFIIDAFKGQVFALST-----HPYGCRVIQRILEHCLPDQTLPILEELHQH-TEQLVQDQYGNYVIQHVLEHGR 227 (339)
T ss_dssp SCGGGGHHHHHHTTTTHHHHHT-----STTHHHHHHHHHHHSCHHHHHHHHHHHHHT-HHHHTTSTTHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHHHHHHHh-----CcchhHHHHHHHhcCCHHHHHHHHHHHHHH-HHHHHhCccHHHHHHHHHHcCC
Confidence 466667777777666655443 334566788888999999999999999866 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHhhcCchHHHHHHHHHHHHH-------HHHHhhhCcCcHHHHHHHcC
Q 006165 348 AKERKKIIKGMKGHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQS-------IIKELVMDKNGRRVLLQLLH 418 (658)
Q Consensus 348 ~K~Rk~Iik~lk~~l~~La~d~~G~~Vlq~lL~~~ddt~l~~k~I~~eL~~-------~l~~L~~~~~Gr~Vll~LL~ 418 (658)
+++|+.|++.|++++..|++|+||++|+++++.+++++. ++.++.++.. .+..|+.|+||++|+..+|.
T Consensus 228 ~~~~~~i~~~l~~~~~~l~~~k~gS~vve~~l~~~~~~~--~~~~~~~l~~~~~~~~~~l~~L~~d~~gn~Viq~~l~ 303 (339)
T d1m8za_ 228 PEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE--RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMID 303 (339)
T ss_dssp HHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHH--HHHHHHHHHHCEETTEEHHHHHHTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHcchhHHHHHHHHHHhCCHHH--HHHHHHHHHhcccCchHHHHHHHcCCcccHHHHHHHH
Confidence 999999999999999999999999999999999998876 6778888753 58899999999999988875
No 2
>d1m8za_ a.118.1.8 (A:) Pumilio 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.3e-35 Score=312.11 Aligned_cols=285 Identities=17% Similarity=0.266 Sum_probs=253.0
Q ss_pred CCCHHHHHHHHHHHHHHHhchHHHhhccCCccHHHHHhhhhCCHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHhcCCH
Q 006165 118 NIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEELQPHFLSLADNTYAVHLVKKMLDNASK 197 (658)
Q Consensus 118 ~~~~eeR~~lv~~l~~~ikg~i~~la~~~~gSRvlQ~lLk~gs~eqr~~I~~eL~~~~~~L~~d~yg~~vVqKLl~~~s~ 197 (658)
..++++|.. +|+++.+++.+|+.+++|++++|+|+++|++++|..|++++.|++..|+.|+||++|||++++.++.
T Consensus 45 ~~~~~~~~~----I~~~l~~~~~~L~~~~~gn~vvqkll~~~~~~~~~~i~~~l~~~~~~L~~~~~gs~Vvq~l~~~~~~ 120 (339)
T d1m8za_ 45 RATPAERQL----VFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPS 120 (339)
T ss_dssp HCCHHHHHH----HHHHHGGGHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCH
T ss_pred hCCHHHHHH----HHHHHHHHHHHHhhCcccchhHHHHHhhCCHHHHHHHHHHHHhhHHHHhcccccchHHHhhhccCCH
Confidence 356777765 4567789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHhhccccchHHHHHHhhCCHHHHHHHHHHHHHhHHhhhcccCCCchhHHHHHHh-hhhhhHHHH
Q 006165 198 KQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVELYSTELQLFKNLVSIKESRLVDVIS-KLGLQKASV 276 (658)
Q Consensus 198 eqr~~Ii~~~~g~v~~L~~h~~Gs~Vvq~l~~~a~~~qr~~li~e~~g~~~~l~~d~~g~~~~~L~~il~-~~~~kr~~i 276 (658)
+++..++.+|++++..++.|++|+||++++++..++.++..++..+.+....++.+..| ...+..+++ ..++++..+
T Consensus 121 ~~~~~l~~el~~~~~~l~~d~~~~~v~~~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g--~~vlq~~l~~~~~~~~~~l 198 (339)
T d1m8za_ 121 DQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYG--CRVIQRILEHCLPDQTLPI 198 (339)
T ss_dssp HHHHHHHHTTTTCHHHHHHSTTHHHHHHHHHHHSCGGGGHHHHHHTTTTHHHHHTSTTH--HHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHhcCCCcchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhCcch--hHHHHHHHhcCCHHHHHHH
Confidence 99999999999999999999999999999999989999999999999999999999887 788888888 456777778
Q ss_pred HHhHHHHHHHHHhcCCCchhHHHHHHHHHHhhCChhHHHHHHHhcchhhHHHhhcCcchhHHHHHHHhhCCHHHHHHHHH
Q 006165 277 LRHMASVIQPILEKGIIDHSIIHRVLMEYLSMADKSSAADIIQQLSGPLLVRMIHTRDGSKIGMLCVKHGSAKERKKIIK 356 (658)
Q Consensus 277 l~~~~~~iq~ileK~~~~~~lvh~~l~ey~~~~~~~~~~elI~~L~~~~l~~L~~tk~GS~Vv~~~L~~~~~K~Rk~Iik 356 (658)
+..+...+..++.. ..++.+ +...+..++++.+..+++.+.++ +..|+++++||+|++.|++++++++|+.++.
T Consensus 199 ~~~l~~~~~~L~~~-~~G~~v----vq~~l~~~~~~~~~~i~~~l~~~-~~~l~~~k~gS~vve~~l~~~~~~~~~~~~~ 272 (339)
T d1m8za_ 199 LEELHQHTEQLVQD-QYGNYV----IQHVLEHGRPEDKSKIVAEIRGN-VLVLSQHKFASNVVEKCVTHASRTERAVLID 272 (339)
T ss_dssp HHHHHHTHHHHTTS-TTHHHH----HHHHHHHSCHHHHHHHHHHHTTC-HHHHHTSTTHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-ccHHHH----HHHHHHcCCHHHHHHHHHHHHhh-HHHHHcchhHHHHHHHHHHhCCHHHHHHHHH
Confidence 77776665555432 333333 33345668899999999999987 7999999999999999999999999999999
Q ss_pred HHH-------HHHHhhhcCCchhHHHHHHHhhcCchHHHHHHHHHHHHHHHHHhhhCcCcHHHHHHH
Q 006165 357 GMK-------GHIGKVAHDQCGSMVLLCIVSIVDDTKLIAKIIIRELQSIIKELVMDKNGRRVLLQL 416 (658)
Q Consensus 357 ~lk-------~~l~~La~d~~G~~Vlq~lL~~~ddt~l~~k~I~~eL~~~l~~L~~~~~Gr~Vll~L 416 (658)
.+. +.+..|+.|+|||||||++|++++++. ++.|+..|.+++.+|..++||++|+..|
T Consensus 273 ~l~~~~~~~~~~l~~L~~d~~gn~Viq~~l~~~~~~~--~~~i~~~l~~~~~~L~~~~~G~~v~~~l 337 (339)
T d1m8za_ 273 EVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQ--RKIVMHKIRPHIATLRKYTYGKHILAKL 337 (339)
T ss_dssp HHHHCEETTEEHHHHHHTSTTHHHHHHHHHHHSCHHH--HHHHHHTTGGGHHHHTTSSTHHHHHHHH
T ss_pred HHHhcccCchHHHHHHHcCCcccHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 875 358999999999999999999999887 7999999999999999999999999876
No 3
>d2yvxa1 a.118.26.1 (A:7-131) Magnesium transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=19.66 E-value=33 Score=27.52 Aligned_cols=53 Identities=11% Similarity=0.026 Sum_probs=29.9
Q ss_pred HHhcCCHHHHHHHHHHHHHhHHHHhhccccchHHHHHHhhCCHHHHHHHHHHH
Q 006165 191 MLDNASKKQLAGFISALHGHVASLLRHMVGSVVVEHAYQLGNATQKQELLVEL 243 (658)
Q Consensus 191 Ll~~~s~eqr~~Ii~~~~g~v~~L~~h~~Gs~Vvq~l~~~a~~~qr~~li~e~ 243 (658)
++...+++....|+.++......-+.+..+..-+..+++.+.++....++.++
T Consensus 42 l~~~l~~~~~aev~~~L~~~~~~~il~~l~~~~~~~~l~~m~~DD~adll~~L 94 (125)
T d2yvxa1 42 VLTLLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAV 94 (125)
T ss_dssp HTTTSCHHHHHHHHHTSCHHHHHHTTSSSCHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHhCCHHHHHHHHHhCCHHHHHHHHHHCCchHHHHHHHHC
Confidence 34444555555555555555554445555555555666666666666666555
No 4
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.58 E-value=2.2e+02 Score=22.62 Aligned_cols=23 Identities=35% Similarity=0.465 Sum_probs=15.9
Q ss_pred HHHHHHHhhCChhHHHHHHHhcc
Q 006165 300 RVLMEYLSMADKSSAADIIQQLS 322 (658)
Q Consensus 300 ~~l~ey~~~~~~~~~~elI~~L~ 322 (658)
.++.+||...+-++....++.|.
T Consensus 12 ~ll~EY~~~~D~~Ea~~~l~eL~ 34 (129)
T d2nsza1 12 MLLKEYLLSGDISEAEHCLKELE 34 (129)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCHHHHHHHHHHcC
Confidence 46789998888666655555553
No 5
>d1deeg_ a.8.1.1 (G:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=13.29 E-value=1.4e+02 Score=19.92 Aligned_cols=26 Identities=15% Similarity=0.316 Sum_probs=21.7
Q ss_pred HHHHHHHHhccCCCHHHHHHHHHHHH
Q 006165 107 LASLWEKMRQRNIAKETRSKLISEAL 132 (658)
Q Consensus 107 ~k~iwE~lr~k~~~~eeR~~lv~~l~ 132 (658)
-+..||.+.-...+.|+|..+|+.+.
T Consensus 3 q~Afyeil~lpnl~eeQrn~fI~sLk 28 (51)
T d1deeg_ 3 QSAFYEILNMPNLNEAQRNGFIQSLK 28 (51)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHHHHH
T ss_pred hhhHHHHHhCCCCCHHHHHHHHHHHh
Confidence 35679999999999999999998764
No 6
>d1t95a1 a.5.8.1 (A:87-161) Hypothetical protein AF0491, middle domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=8.54 E-value=1.2e+02 Score=22.24 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=26.9
Q ss_pred CCCHHHHHHHHHHHHHHHhchHHHhhccCCc
Q 006165 118 NIAKETRSKLISEALQKMKGKIPEIAGSHVS 148 (658)
Q Consensus 118 ~~~~eeR~~lv~~l~~~ikg~i~~la~~~~g 148 (658)
..+.+||...+++.+.+|-.-+.+.|-++.+
T Consensus 6 Qls~~eR~~~~e~k~~~Ii~~I~~~~VnP~T 36 (75)
T d1t95a1 6 QITAEQRREMLEAKRKQIINFISRNTIDPRT 36 (75)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHEEBTTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 3678899999999999999999998888765
No 7
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=7.63 E-value=3.2e+02 Score=22.53 Aligned_cols=66 Identities=15% Similarity=0.048 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhchHHHhhccCCccHHHHHhhhhCCHHHHHHHHHHH
Q 006165 103 LELELASLWEKMRQRNIAKETRSKLISEALQKMKGKIPEIAGSHVSSRVLQTCVKYCSQAERDAVFEEL 171 (658)
Q Consensus 103 ~~~~~k~iwE~lr~k~~~~eeR~~lv~~l~~~ikg~i~~la~~~~gSRvlQ~lLk~gs~eqr~~I~~eL 171 (658)
++..+..+++.|+....+.++=......++..+.. .......+.+.+...+...+.+.++.+.+.|
T Consensus 83 t~e~~~~~~~~l~~~~~t~eeL~~ak~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~e~I 148 (196)
T d2fgea2 83 TLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVDS---YQLPDAKGYSSLLRHLLGVTDEERQRKREEI 148 (196)
T ss_dssp HHHHHHTHHHHHHTCCCCHHHHHHHHHHHHHHHTC---CCCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhhc---ccchhHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 45566778888888888877655555544432211 0111111223333344456666666665554
No 8
>d1vi0a2 a.121.1.1 (A:78-194) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=7.13 E-value=2.2e+02 Score=21.22 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=15.0
Q ss_pred hchHHHhhccCCccHHHHHhhhhCCHHHHHHH
Q 006165 136 KGKIPEIAGSHVSSRVLQTCVKYCSQAERDAV 167 (658)
Q Consensus 136 kg~i~~la~~~~gSRvlQ~lLk~gs~eqr~~I 167 (658)
..++.-+..+++.++|+..-+...+++.+..+
T Consensus 11 ~~~~~~~~~~~~~~~i~~~E~~~~~~~~~~~i 42 (117)
T d1vi0a2 11 SKHFSLLAGDHNLAIVTQLELRQSNLELRQKI 42 (117)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCCSHHHHHHH
T ss_pred HHHHHHHHhCcchHHhHHHHHhcCCHHHHHHH
Confidence 33444445555555555444444444444433
No 9
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=6.83 E-value=5.8e+02 Score=21.34 Aligned_cols=25 Identities=16% Similarity=0.239 Sum_probs=16.0
Q ss_pred HHHHHHhHHHHhhccccchHHHHHHh
Q 006165 204 ISALHGHVASLLRHMVGSVVVEHAYQ 229 (658)
Q Consensus 204 i~~~~g~v~~L~~h~~Gs~Vvq~l~~ 229 (658)
+..+...+.. +.||+.-|+-+.+++
T Consensus 90 l~~~l~~~l~-ll~P~~PfitEeiw~ 114 (218)
T d1ivsa2 90 LEEVLAVLLK-LLHPMMPFLTSELYQ 114 (218)
T ss_dssp HHHHHHHHHH-HHTTTSHHHHHHHHH
T ss_pred hHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3333333333 468988888888886
No 10
>d1okra_ a.4.5.39 (A:) Methicillin resistance regulatory protein MecI {Staphylococcus aureus [TaxId: 1280]}
Probab=6.45 E-value=4.5e+02 Score=19.84 Aligned_cols=64 Identities=16% Similarity=-0.012 Sum_probs=40.2
Q ss_pred hhcchhHHHHHHHHhCC--------------c-hhHHHHHHHhhhhhhhhhccccchhHhHHhhcC--CCHHHHHHHHHh
Q 006165 574 LENFHSSRTIRKLVMDC--------------P-KFASTLWKNALKGKSEFWAQGHSCKVVTAFLES--SDFKVRELAKTE 636 (658)
Q Consensus 574 ~~~~~~~r~lk~li~~~--------------~-~F~~~l~~~~~~~~~~~wa~~~g~~vv~alle~--~~~~~~~~~~~~ 636 (658)
+..+....+|++|...+ | .=.+.....++...+..|..+...-++.+|++. .+++..+..+..
T Consensus 37 ~~~sTv~t~L~rL~~Kg~l~r~~~gr~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~el~~L~~l 116 (120)
T d1okra_ 37 WSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELRNI 116 (120)
T ss_dssp CCHHHHHHHHHHHHHHTSEEEEEETTEEEEEESSCHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred ccHHhHHHHHHHHHHCCCeEEEecCCceEEeecCCHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccCCCHHHHHHHHHH
Confidence 44567788999998766 1 011222223344456677777777788888875 467776666655
Q ss_pred h
Q 006165 637 L 637 (658)
Q Consensus 637 l 637 (658)
|
T Consensus 117 L 117 (120)
T d1okra_ 117 L 117 (120)
T ss_dssp H
T ss_pred H
Confidence 4
Done!